WorldWideScience

Sample records for group abundance analysis

  1. Chemical Abundance Analysis of Moving Group W11450 (Latham 1)

    CERN Document Server

    O'Connell, Julia E; Frinchaboy, Peter M

    2016-01-01

    We present elemental abundances for all seven stars in Moving Group W11450 (Latham 1) to determine if they may be chemically related. These stars appear to be both spatially and kinematically related, but no spectroscopic abundance analysis exists in literature. Abundances for eight elements were derived via equivalent width analyses of high resolution (R $\\sim$60,000), high signal-to-noise ratio ($\\langle$SNR$\\rangle\\sim$100) spectra obtained with the Otto Struve 2.1m telescope and Sandiford Echelle Spectrograph at McDonald Observatory. The large star-to-star scatter in metallicity, -0.55 $\\leq$ [Fe/H] $\\leq$ 0.06 dex ($\\sigma$= 0.25), implies these stars were not produced from the same chemically homogeneous molecular cloud, and are therefore not part of a remnant or open cluster as previously proposed. Prior to this analysis, it was suggested that two stars in the group, W11449 & W11450, are possible wide binaries. The candidate wide binary pair show similar chemical abundance patterns with not only ir...

  2. Comparative 16S rRNA Analysis of Lake Bacterioplankton Reveals Globally Distributed Phylogenetic Clusters Including an Abundant Group of Actinobacteria

    Science.gov (United States)

    Glöckner, Frank Oliver; Zaichikov, Evgeny; Belkova, Natalia; Denissova, Ludmilla; Pernthaler, Jakob; Pernthaler, Annelie; Amann, Rudolf

    2000-01-01

    In a search for cosmopolitan phylogenetic clusters of freshwater bacteria, we recovered a total of 190 full and partial 16S ribosomal DNA (rDNA) sequences from three different lakes (Lake Gossenköllesee, Austria; Lake Fuchskuhle, Germany; and Lake Baikal, Russia). The phylogenetic comparison with the currently available rDNA data set showed that our sequences fall into 16 clusters, which otherwise include bacterial rDNA sequences of primarily freshwater and soil, but not marine, origin. Six of the clusters were affiliated with the α, four were affiliated with the β, and one was affiliated with the γ subclass of the Proteobacteria; four were affiliated with the Cytophaga-Flavobacterium-Bacteroides group; and one was affiliated with the class Actinobacteria (formerly known as the high-G+C gram-positive bacteria). The latter cluster (hgcI) is monophyletic and so far includes only sequences directly retrieved from aquatic environments. Fluorescence in situ hybridization (FISH) with probes specific for the hgcI cluster showed abundances of up to 1.7 × 105 cells ml−1 in Lake Gossenköllesee, with strong seasonal fluctuations, and high abundances in the two other lakes investigated. Cell size measurements revealed that Actinobacteria in Lake Gossenköllesee can account for up to 63% of the bacterioplankton biomass. A combination of phylogenetic analysis and FISH was used to reveal 16 globally distributed sequence clusters and to confirm the broad distribution, abundance, and high biomass of members of the class Actinobacteria in freshwater ecosystems. PMID:11055963

  3. Group-scale asymmetric abundance structures in the NGC 533 group

    Institute of Scientific and Technical Information of China (English)

    Jun-Hua Gu; Min Lei; Hai-Guang Xu; Jing-Ying Wang; Yu Wang; Shao-Feng Xu; Zhen-Zhen Qin; Li-Yi Gu; Tao An; Zhong-Li Zhang

    2012-01-01

    By performing a two dimensional spectral analysis on the galaxy group NGC 533 with high-quality Chandra data,we find that the metal abundance distribution in this group is anisotropic.In the area around 2.5' from the center,we find two concentrations of high abundance structures,in which the abundances are significantly higher than their surrounding regions at the 90% confidence level.We find that the total iron mass in these two regions agrees with the iron mass synthesized in the central dominant galaxy in 0.12+0.08-0.03 Gyr.The double-sided configuration of the high abundance structure,together with the point-like radio emission in the center suggests that the abundance structures could have been transported from the center to their present positions by active galactic nucleus (AGN) activity.We further calculate the energy required for transport,and find that it could have been supplied during an AGN period.However,considering that this group is reported to have experienced a recent merger,the possibility that this merger is responsible for the abundance structures still cannot be excluded.

  4. Abundance profiles and cool cores in galaxy groups

    CERN Document Server

    Johnson, Ria; Ponman, Trevor J; Rasmussen, Jesper; Sanderson, Alastair J R

    2011-01-01

    Using data from the Two Dimensional XMM-Newton Group Survey (2dXGS), we have examined the abundance profile properties of both cool core (CC) and non cool core (NCC) galaxy groups. The ten NCC systems in our sample represent a population which to date has been poorly studied in the group regime. Fitting the abundance profiles as a linear function of log radius, we find steep abundance gradients in cool core (CC) systems, with a slope of -0.54+/-0.07. In contrast, non cool core (NCC) groups have profiles consistent with uniform metallicity. Many CC groups show a central abundance dip or plateau, and we find evidence for anticorrelation between the core abundance gradient and the 1.4 GHz radio power of the brightest group galaxy (BGG) in CC systems. This may indicate the effect of AGN-driven mixing within the central ~0.1r_500. It is not possible to discern whether such behaviour is present in the NCC groups, due to the small and diverse sample with the requisite radio data. The lack of strong abundance gradien...

  5. New Abundant Microbial Groups in Aquatic Hypersaline Environments

    OpenAIRE

    Ghai, Rohit; Pašić, Lejla; Fernández González, Ana Beatriz; Martín Cuadrado, Ana Belén; Megumi Mizuno, Carolina; McMahon, Katherine D.; Papke, R Thane; Stepanauskas, Ramunas; Rodríguez Brito, Beltrán; Rohwer, Forest; Sánchez-Porro Álvarez, Cristina; Ventosa Ucero, Antonio; Rodríguez Valera, Francisco

    2011-01-01

    We describe the microbiota of two hypersaline saltern ponds, one of intermediate salinity (19%) and a NaCl saturated crystallizer pond (37%) using pyrosequencing. The analyses of these metagenomes (nearly 784 Mb) reaffirmed the vast dominance of Haloquadratum walsbyi but also revealed novel, abundant and previously unsuspected microbial groups. We describe for the first time, a group of low GC Actinobacteria, related to freshwater Actinobacteria, abundant in low and intermediate salinities. M...

  6. Abundance analysis of DAZ white dwarfs

    CERN Document Server

    Kawka, Adela; Dinnbier, Frantisek; Cibulkova, Helena; Nemeth, Peter

    2010-01-01

    We present an abundance analysis of a sample of 33 hydrogen-rich (DA) white dwarfs. We have used archival high-resolution spectra to measure abundances of calcium, magnesium and iron in a set of 30 objects. In addition, we present preliminary calcium abundances in three new white dwarfs based on low-dispersion spectra. We investigate some abundance ratios (Mg/Ca, Fe/Ca) that may help uncover the composition of the accretion source.

  7. Abundance analysis of Barium stars

    Institute of Scientific and Technical Information of China (English)

    Guo-Qing Liu; Yan-Chun Liang; Li-Cai Deng

    2009-01-01

    We obtain the chemical abundances of six barium stars and two CH subgiant stars based on the high signal-to-noise ratio and high resolution Echelle spectra. The neu- tron capture process elements Y, Zr, Ba, La and Eu show obvious overabundances relative to the Sun, for example, their [Ba/Fe] values are from 0.45 to 1.27. Other elements, in- cluding Na, Mg, A1, Si, Ca, Sc, Ti, V, Cr, Mn and Ni, show comparable abundances to the Solar ones, and their [Fe/H] covers a range from -0.40 to 0.21, which means they belong to the Galactic disk. The predictions of the theoretical model of wind accretion for bi- nary systems can explain the observed abundance patterns of the neutron capture process elements in these stars, which means that their overabundant heavy-elements could be caused by accreting the ejecta of AGB stars, the progenitors of present-day white dwarf companions in binary systems.

  8. Comparing Amino Acid Abundances and Distributions Across Carbonaceous Chondrite Groups

    Science.gov (United States)

    Burton, Aaron S.; Callahan, Michael P.; Glavin, Daniel P.; Elsila, Jamie E.; Dworkin, Jason P.

    2012-01-01

    Meteorites are grouped according to bulk properties such as chemical composition and mineralogy. These parameters can vary significantly among the different carbonaceous chondrite groups (CI, CM, CO, CR, CH, CB, CV and CK). We have determined the amino acid abundances of more than 30 primary amino acids in meteorites from each of the eight groups, revealing several interesting trends. There are noticeable differences in the structural diversity and overall abundances of amino acids between meteorites from the different chondrite groups. Because meteorites may have been an important source of amino acids to the prebiotic Earth and these organic compounds are essential for life as we know it, the observed variations of these molecules may have been important for the origins of life.

  9. Chemical abundance analysis of 19 barium stars

    CERN Document Server

    Yang, G C; Spite, M; Chen, Y Q; Zhao, G; Zhang, B; Liu, G Q; Liu, Y J; Liu, N; Deng, L C; Spite, F; Hill, V; Zhang, C X

    2016-01-01

    We aim at deriving accurate atmospheric parameters and chemical abundances of 19 barium (Ba) stars, including both strong and mild Ba stars, based on the high signal-to-noise ratio and high resolution Echelle spectra obtained from the 2.16 m telescope at Xinglong station of National Astronomical Observatories, Chinese Academy of Sciences. The chemical abundances of the sample stars were obtained from an LTE, plane-parallel and line-blanketed atmospheric model by inputting the atmospheric parameters (effective temperatures, surface gravities, metallicity and microturbulent velocity) and equivalent widths of stellar absorption lines. These samples of Ba stars are giants indicated by atmospheric parameters, metallicities and kinematic analysis about UVW velocity. Chemical abundances of 17 elements were obtained for these Ba stars. Their light elements (O, Na, Mg, Al, Si, Ca, Sc, Ti, V, Cr, Mn and Ni) are similar to the solar abundances. Our samples of Ba stars show obvious overabundances of neutron-capture (n-ca...

  10. Analysis of 26 Barium Stars I. Abundances

    CERN Document Server

    Allen, D M; Allen, Dinah M.; Barbuy, Beatriz

    2006-01-01

    We present a detailed analysis of 26 barium stars, including dwarf barium stars, providing their atmospheric parameters (Teff, log g, [Fe/H], vt) and elemental abundances. We aim at deriving gravities and luminosity classes of the sample stars, in particular to confirm the existence of dwarf barium stars. Accurate abundances of chemical elements were derived. Abundance ratios between nucleosynthetic processes, by using Eu and Ba as representatives of the r- and s-processes are presented. High-resolution spectra with the FEROS spectrograph at the ESO-1.5m Telescope, and photometric data with Fotrap at the Zeiss telescope at the LNA were obtained. The atmospheric parameters were derived in an iterative way, with temperatures obtained from colour-temperature calibrations. The abundances were derived using spectrum synthesis for Li, Na, Al, alpha-, iron peak, s- and r-elements atomic lines, and C and N molecular lines. Atmospheric parameters in the range 4300 < Teff < 6500, -1.2 < [Fe/H] < 0.0 and 1.4...

  11. Environmental distribution, abundance and activity of the Miscellaneous Crenarchaeotal Group

    Science.gov (United States)

    Lloyd, K. G.; Biddle, J.; Teske, A.

    2011-12-01

    Many marine sedimentary microbes have only been identified by 16S rRNA sequences. Consequently, little is known about the types of metabolism, activity levels, or relative abundance of these groups in marine sediments. We found that one of these uncultured groups, called the Miscellaneous Crenarchaeotal Group (MCG), dominated clone libraries made from reverse transcribed 16S rRNA, and 454 pyrosequenced 16S rRNA genes, in the White Oak River estuary. Primers suitable for quantitative PCR were developed for MCG and used to show that 16S rRNA DNA copy numbers from MCG account for nearly all the archaeal 16S rRNA genes present. RT-qPCR shows much less MCG rRNA than total archaeal rRNA, but comparisons of different primers for each group suggest bias in the RNA-based work relative to the DNA-based work. There is no evidence of a population shift with depth below the sulfate-methane transition zone, suggesting that the metabolism of MCG may not be tied to sulfur or methane cycles. We classified 2,771 new sequences within the SSU Silva 106 database that, along with the classified sequences in the Silva database was used to make an MCG database of 4,646 sequences that allowed us to increase the named subgroups of MCG from 7 to 19. Percent terrestrial sequences in each subgroup is positively correlated with percent of the marine sequences that are nearshore, suggesting that membership in the different subgroups is not random, but dictated by environmental selective pressures. Given their high phylogenetic diversity, ubiquitous distribution in anoxic environments, and high DNA copy number relative to total archaea, members of MCG are most likely anaerobic heterotrophs who are integral to the post-depositional marine carbon cycle.

  12. Automatic abundance analysis of high resolution spectra

    CERN Document Server

    Bonifacio, P; Bonifacio, Piercarlo; Caffau, Elisabetta

    2003-01-01

    We describe an automatic procedure for determining abundances from high resolution spectra. Such procedures are becoming increasingly important as large amounts of data are delivered from 8m telescopes and their high-multiplexing fiber facilities, such as FLAMES on ESO-VLT. The present procedure is specifically targeted for the analysis of spectra of giants in the Sgr dSph; however, the procedure may be, in principle, tailored to analyse stars of any type. Emphasis is placed on the algorithms and on the stability of the method; the external accuracy rests, ultimately, on the reliability of the theoretical models (model-atmospheres, synthetic spectra) used to interpret the data. Comparison of the results of the procedure with the results of a traditional analysis for 12 Sgr giants shows that abundances accurate at the level of 0.2 dex, comparable with that of traditional analysis of the same spectra, may be derived in a fast and efficient way. Such automatic procedures are not meant to replace the traditional ...

  13. Soil pH regulates the abundance and diversity of Group 1.1c Crenarchaeota.

    Science.gov (United States)

    Lehtovirta, Laura E; Prosser, James I; Nicol, Graeme W

    2009-12-01

    Archaeal communities in many acidic forest soil systems are dominated by a distinct crenarchaeal lineage Group 1.1c. In addition, they are found consistently in other acidic soils including grassland pasture, moorland and alpine soils. To determine whether soil pH is a major factor in determining their presence and abundance, Group 1.1c community size and composition were investigated across a pH gradient from 4.5 to 7.5 that has been maintained for > 40 years. The abundances of Group 1.1c Crenarchaeota, total Crenarchaeota and total bacteria were assessed by quantitative PCR (qPCR) targeting 16S rRNA genes and the diversity of Group 1.1c crenarchaeal community was investigated by denaturing gradient gel electrophoresis (DGGE) and phylogenetic analysis. The abundance of Group 1.1c Crenarchaeota declined as the pH increased, whereas total Crenarchaeota and Bacteria showed no clear trend. Community diversity of Group 1.1c Crenarchaeota was also influenced with different DGGE bands dominating at different pH. Group 1.1c Crenarchaeota were also quantified in 13 other soils representing a range of habitats, soil types and pH. These results exhibited the same trend as that shown across the pH gradient with Group 1.1c Crenarchaeota representing a greater proportion of total Crenarchaeota in the most acidic soils.

  14. Latitudinal patterns in the abundance of major marine bacterioplankton groups

    DEFF Research Database (Denmark)

    Wietz, Matthias; Gram, Lone; Jørgensen, Bo

    2010-01-01

    This study describes the abundance of major marine bacterioplankton taxa and two bacterial genera (Pseudoalteromonas and Vibrio) in surface seawater at 24 stations around the world. Catalyzed Reporter Deposition-Fluorescence in situ Hybridization (CARD-FISH) showed that Alphaproteobacteria (average...... relative abundance 37%, average absolute abundance 3.7×105 cells mL-1) including SAR11 (30%/3×105), Gammaproteobacteria (14%/1.2×105), and Bacteroidetes (12%/1.3×105) globally dominated the bacterioplankton. The SAR86 clade (4.6%/4.1×104) and Actinobacteria (4.5%/4×104) were detected ubiquitously, whereas...... oceans underlined the presence of biogeographical patterns among marine bacteria and the influence of environmental parameters on bacterial distribution....

  15. Termites Are A Group of Invertebrates Abundant In Forested Habitats

    Directory of Open Access Journals (Sweden)

    Tubagus M

    2003-04-01

    Full Text Available In this study, we conduct an inventory and spatial analysis of the termite fauna of the UI campus. The survey records the presence of six termite species (Coptotermes curvignathus, Schedorhinotermes javanicus, Macrotermes gilvus, Microtermes insperatus, Odontotermes grandiceps, and Odontotermes javanicus, most of which had been reported by previous studies. The spatial analysis of termite nest distribution suggests a random scattering of termite nests in the UI campus.

  16. Termites Are A Group of Invertebrates Abundant In Forested Habitats

    OpenAIRE

    Tubagus M; Andya Primanda; Adi Basukriadi

    2003-01-01

    In this study, we conduct an inventory and spatial analysis of the termite fauna of the UI campus. The survey records the presence of six termite species (Coptotermes curvignathus, Schedorhinotermes javanicus, Macrotermes gilvus, Microtermes insperatus, Odontotermes grandiceps, and Odontotermes javanicus), most of which had been reported by previous studies. The spatial analysis of termite nest distribution suggests a random scattering of termite nests in the UI campus.

  17. Galaxy Interactions in Compact Groups II: abundance and kinematic anomalies in HCG 91c

    CERN Document Server

    Vogt, F P A; Borthakur, S; Verdes-Montenegro, L; Heckman, T M; Yun, M S; Chambers, K C

    2015-01-01

    Galaxies in Hickson Compact Group 91 (HCG 91) were observed with the WiFeS integral field spectrograph as part of our ongoing campaign targeting the ionized gas physics and kinematics inside star forming members of compact groups. Here, we report the discovery of HII regions with abundance and kinematic offsets in the otherwise unremarkable star forming spiral HCG 91c. The optical emission line analysis of this galaxy reveals that at least three HII regions harbor an oxygen abundance ~0.15 dex lower than expected from their immediate surroundings and from the abundance gradient present in the inner regions of HCG 91c. The same star forming regions are also associated with a small kinematic offset in the form of a lag of 5-10 km/s with respect to the local circular rotation of the gas. HI observations of HCG 91 from the Very Large Array and broadband optical images from Pan-STARRS suggest that HCG 91c is caught early in its interaction with the other members of HCG 91. We discuss different scenarios to explain...

  18. Galaxy interactions in compact groups - II. Abundance and kinematic anomalies in HCG 91c

    Science.gov (United States)

    Vogt, Frédéric P. A.; Dopita, Michael A.; Borthakur, Sanchayeeta; Verdes-Montenegro, Lourdes; Heckman, Timothy M.; Yun, Min S.; Chambers, Kenneth C.

    2015-07-01

    Galaxies in Hickson Compact Group 91 (HCG 91) were observed with the WiFeS integral field spectrograph as part of our ongoing campaign targeting the ionized gas physics and kinematics inside star-forming members of compact groups. Here, we report the discovery of H II regions with abundance and kinematic offsets in the otherwise unremarkable star-forming spiral HCG 91c. The optical emission line analysis of this galaxy reveals that at least three H II regions harbour an oxygen abundance ˜0.15 dex lower than expected from their immediate surroundings and from the abundance gradient present in the inner regions of HCG 91c. The same star-forming regions are also associated with a small kinematic offset in the form of a lag of 5-10 km s-1 with respect to the local circular rotation of the gas. H I observations of HCG 91 from the Very Large Array and broad-band optical images from Pan-STARRS (Panoramic Survey Telescope And Rapid Response System) suggest that HCG 91c is caught early in its interaction with the other members of HCG 91. We discuss different scenarios to explain the origin of the peculiar star-forming regions detected with WiFeS, and show that evidence points towards infalling and collapsing extraplanar gas clouds at the disc-halo interface, possibly as a consequence of long-range gravitational perturbations of HCG 91c from the other group members. As such, HCG 91c provides evidence that some of the perturbations possibly associated with the early phase of galaxy evolution in compact groups impact the star-forming disc locally, and on sub-kpc scales.

  19. Correspondence Analysis of Archeological Abundance Matrices

    OpenAIRE

    de Leeuw, Jan

    2007-01-01

    In this chapter we discuss the Correspondence Analysis (CA) techniques used in other chapters of this book. CA is presented as a multivariate exploratory technique, as a proximity analysis technique based on Benzecri distances, as a technique to decompose the total chi-square of frequency matrices, and as a least squares method to fit association or ordination models.

  20. Fourier Analysis on Groups

    CERN Document Server

    Rudin, Walter

    2011-01-01

    In the late 1950s, many of the more refined aspects of Fourier analysis were transferred from their original settings (the unit circle, the integers, the real line) to arbitrary locally compact abelian (LCA) groups. Rudin's book, published in 1962, was the first to give a systematic account of these developments and has come to be regarded as a classic in the field. The basic facts concerning Fourier analysis and the structure of LCA groups are proved in the opening chapters, in order to make the treatment relatively self-contained.

  1. Testing surrogacy assumptions: can threatened and endangered plants be grouped by biological similarity and abundances?

    Science.gov (United States)

    Che-Castaldo, Judy P; Neel, Maile C

    2012-01-01

    There is renewed interest in implementing surrogate species approaches in conservation planning due to the large number of species in need of management but limited resources and data. One type of surrogate approach involves selection of one or a few species to represent a larger group of species requiring similar management actions, so that protection and persistence of the selected species would result in conservation of the group of species. However, among the criticisms of surrogate approaches is the need to test underlying assumptions, which remain rarely examined. In this study, we tested one of the fundamental assumptions underlying use of surrogate species in recovery planning: that there exist groups of threatened and endangered species that are sufficiently similar to warrant similar management or recovery criteria. Using a comprehensive database of all plant species listed under the U.S. Endangered Species Act and tree-based random forest analysis, we found no evidence of species groups based on a set of distributional and biological traits or by abundances and patterns of decline. Our results suggested that application of surrogate approaches for endangered species recovery would be unjustified. Thus, conservation planning focused on individual species and their patterns of decline will likely be required to recover listed species.

  2. A Differential Abundance Analysis of HD219175 A and B

    Institute of Scientific and Technical Information of China (English)

    Hua-Wei Zhang; Gang Zhao

    2005-01-01

    The abundances of the wide binary pair HD 219175 A and B are determined and compared using a line-by-line differential analysis. No evidence for difference has been found in the abundances of Fe, O, Na, Mg, Al, Si, K, Ca, Sc,Ti, V, Cr, Mn, Ni, Cu and Ba. Our results support a physical relation between the two components of HD 219175.

  3. Iron-Group Abundances in the Metal-Poor Main Sequence Turnoff Star HD~84937

    CERN Document Server

    Sneden, Christopher; Kobayashi, Chiaki; Pignatari, Marco; Lawler, James E; Hartog, Elizabeth A Den; Wood, Michael P

    2015-01-01

    We have derived new very accurate abundances of the Fe-group elements Sc through Zn (Z = 21-30) in the bright main-sequence turnoff star HD 84937, based on high-resolution spectra covering the visible and ultraviolet spectral regions. New or recent laboratory transition data for 14 species of seven elements have been used. Abundances from more than 600 lines of non-Fe species have been combined with about 550 Fe lines in HD 84937 to yield abundance ratios of high precision. The abundances have been determined from both neutral and ionized transitions, which generally are in agreement with each other. We find no substantial departures from standard LTE Saha ionization balance in this [Fe/H] = -2.32 star. Noteworthy among the abundances are: [Co/Fe] = 0.14 and [Cu/Fe] = -0.83, in agreement with past studies abundance trends in this and other low metallicity stars; and = 0.31, which has not been noted previously. A detailed examination of scandium, titanium, and vanadium abundances in large-sample spectroscopic...

  4. Expanded haloes, abundance matching and too-big-to-fail in the Local Group

    CERN Document Server

    Brook, Chris B

    2014-01-01

    Observed kinematical data of 40 Local Group members are used to derive the dark matter halo mass of such galaxies. Haloes are selected from the theoretically expected Local Group mass function and two different density profiles are assumed, the standard NFW model and a mass dependent profile which accounts for the effects of baryons in modifying the dark matter distribution within galaxies. The resulting relations between stellar and halo mass are compared with expectations from abundance matching. Using the NFW profile, the ensemble of Local Group galaxies is generally fit in relatively low mass haloes, leaving dark many massive haloes of Mhalo>10^10Msun: this reflects the "too big to fail" problem in the Local Group and results in a Mstar-Mhalo relation that differs from abundance matching predictions. Moreover, the star formation efficiency of isolated Local Group galaxies increases with decreasing halo mass when adopting a NFW model. By contrast, using the mass dependent density profile, relatively high s...

  5. Chemical Abundances of Seven Irregular and Three Tidal Dwarf Galaxies in the M81 Group

    CERN Document Server

    Croxall, Kevin V; Lee, Henry; Skillman, Evan D; Lee, Janice C; Côté, Stéphanie; Kennicutt, Robert C; Miller, Bryan W; 10.1088/0004-637X/705/1/723

    2009-01-01

    We have derived nebular abundances for 10 dwarf galaxies belonging to the M81 Group, including several galaxies which do not have abundances previously reported in the literature. For each galaxy, multiple H \\ii regions were observed with GMOS-N at the Gemini Observatory in order to determine abundances of several elements (oxygen, nitrogen, sulfur, neon, and argon). For seven galaxies, at least one H \\ii region had a detection of the temperature sensitive [OIII] $\\lambda$4363 line, allowing a "direct" determination of the oxygen abundance. No abundance gradients were detected in the targeted galaxies and the observed oxygen abundances are typically in agreement with the well known metallicity-luminosity relation. However, three candidate "tidal dwarf" galaxies lie well off this relation, UGC 5336, Garland, and KDG 61. The nature of these systems suggests that UGC 5336 and Garland are indeed recently formed systems, whereas KDG 61 is most likely a dwarf spheroidal galaxy which lies along the same line of sigh...

  6. Detailed Iron-Group Abundances in a Very Metal-Poor Main Sequence Turnoff Star

    Science.gov (United States)

    Sneden, Chris; Roederer, Ian U.; Boesgaard, Ann M.; Lawler, James E.; Den Hartog, Elizabeth; Cowan, John J.; Sobeck, Jennifer

    2017-01-01

    We have obtained Keck HIRES and HST STIS high resolution, high signal-to-noise spectra of the very metal-poor ([Fe/H] ~ -2.9) main-sequence turnoff star BD+03 740. A detailed chemical composition analysis based on synthetic spectrum computations has been conducted. Our initial focus has been on the iron-group elements in the Z = 21-28 range. This study takes advantage of recent improvements in neutral and ionzied species transition data for all of these elements except Sc (Z = 21) by the Wisconsin atomic physics group (see a companion presentation on Cr II at this meeting). Several metal-poor abundance surveys have concluded that there are large overabundances of Co and underabundances of Cr with respect to Fe for stars with [Fe/H] synthesis in the Galaxy.This work has been supported by HST STScI Program GO-14232; and NSF grants AST-1211585 and AST-1616040 to CS; AST-1516182 to JEL and EDH; NASA grant NNX16AE96G to JEL

  7. Estimating abundances of 0-group western Baltic cod by using pound net fisheries

    DEFF Research Database (Denmark)

    Bauer, Robert; Stepputtis, Daniel; Storr-Paulsen, Marie

    2010-01-01

    Nearshore 0-group western Baltic cod are frequently caught as bycatch in the commercial pound net fishery. Pound net fishermen from the Danish Isle of Funen and Lolland and the German Isle of Fehmarn have recorded their catches of small cod between September and December 2008. Abundance patterns...

  8. High-resolution abundance analysis of HD 140283

    CERN Document Server

    Siqueira-Mello, C; Barbuy, B; Spite, M; Spite, F; Korotin, S A

    2015-01-01

    HD 140283 is a reference subgiant that is metal poor and confirmed to be a very old star. The abundances of this type of old star can constrain the nature and nucleosynthesis processes that occurred in its (even older) progenitors. The present study may shed light on nucleosynthesis processes yielding heavy elements early in the Galaxy. A detailed abundance analysis of a high-quality spectrum is carried out, with the intent of providing a reference on stellar lines and abundances of a very old, metal-poor subgiant. We aim to derive abundances from most available and measurable spectral lines. The analysis is carried out using high-resolution (R = 81 000) and high signal-to-noise ratio (800 < S/N/pixel < 3400) spectrum, in the wavelength range 3700 - 10475, obtained with a seven-hour exposure time, using the ESPaDOnS at the CFHT. The calculations in LTE were performed with the OSMARCS 1D atmospheric model and the spectrum synthesis code Turbospectrum, while the analysis in NLTE is based on the MULTI code...

  9. Abundances in photoionized nebulae of the Local Group and nucleosynthesis of intermediate mass stars

    Science.gov (United States)

    Maciel, W. J.; Costa, R. D. D.; Cavichia, O.

    2017-04-01

    Photoionized nebulae, comprising HII regions and planetary nebulae, are excellent laboratories to investigate the nucleosynthesis and chemical evolution of several elements in the Galaxy and other galaxies of the Local Group. Our purpose in this investigation is threefold: (i) compare the abundances of HII regions and planetary nebulae in each system in order to investigate the differences derived from the age and origin of these objects, (ii) compare the chemical evolution in different systems, such as the Milky Way, the Magellanic Clouds, and other galaxies of the Local Group, and (iii) investigate to what extent the nucleosynthesis contributions from the progenitor stars affect the observed abundances in planetary nebulae, which constrains the nucleosynthesis of intermediate mass stars. We show that all objects in the samples present similar trends concerning distance-independent correlations, and some constraints can be defined on the production of He and N by the PN progenitor stars.

  10. Interstellar Medium Oxygen Abundances of Dwarf Irregular Galaxies in Centaurus A and Nearby Groups

    CERN Document Server

    Lee, Henry; Grebel, E K; 10.1111/j.1365-2966.2007.11481.x

    2008-01-01

    We present results of optical spectroscopy of 35 H II regions from eight dwarf galaxies in the Centaurus A group. [O III]4363 A is detected in ESO272-G025 and ESO324-G024, and direct oxygen abundances of 12+log(O/H) = 7.76 +/- 0.09 and 7.94 +/- 0.11 are derived, respectively. For the remaining galaxies, abundances are derived using common bright-line methods. To compare the influence of group environments on dwarf galaxies, we have also gathered data for additional dwarf irregular galaxies from the Cen A and the Sculptor groups from the literature. We have examined possible relationships between oxygen abundance, gas fraction, effective chemical yield, and tidal indices. Despite large positive tidal indices for a number of Cen A dwarfs in the present sample, there is no clear separation between galaxies with positive tidal indices and galaxies with negative tidal indices in the luminosity-metallicity, metallicity-gas fraction, and metallicity-tidal index diagrams. The H I surface mass density decreases with i...

  11. The Advanced Spectral Library (ASTRAL): Abundance Analysis of the CP Star HR 465

    Science.gov (United States)

    Carpenter, Kenneth G.; Nielsen, Krister E.; Kober, Gladys V.

    2016-01-01

    We present the results of a spectrum analysis of the prototypical A-type magnetic CP star HR465. Synthetic spectra, using an non-LTE atmosphere model, were generated to fit high-resolution ultraviolet spectra (1200-3100 A) obtained as a part of the "Advanced Spectral Library (ASTRAL) Project: Hot Stars" program (GO-13346: Ayres PI). The ultraviolet data were supplemented by high resolution optical data recorded at the Nordic Optical Telescope with the SOFIN spectrograph. The optical data was used as a complement to the high line density ultraviolet spectrum and primarily used to derive accurate iron-group element abundances.HR 465 has previously been analyzed using IUE spectra. We revisit the object with this high quality data. Large parts of the spectrum have been synthesized with an ATLAS model (Teff=10750K, logg=4.0) and we present abundance results for more than 50 elements. We can confirm some of the abundance characteristics previously derived from IUE data, where elements heavier than Z=30 show significant abundance enhancements compared to solar values, while some of the lighter elements show abundance deficiencies. We will place these results in context of other AP stars, and the large number of element abundances will also help us to put some constraint on stellar abundance and evolution theories.

  12. Abundance analysis of s-process enhanced barium stars

    CERN Document Server

    Mahanta, Upakul; Goswami, Aruna; Duorah, Kalpana

    2016-01-01

    Detailed chemical composition studies of stars with enhanced abundances of neutron-capture elements can provide observational constraints for neutron-capture nucleosynthesis studies and clues for understanding their contribution to the Galactic chemical enrichment. We present abundance results from high-resolution spectral analyses of a sample of four chemically peculiar stars characterized by s-process enhancement. High-Resolution spectra (R ~ 42000) of these objects spanning a wavelength range from 4000 to 6800 A, are taken from the ELODIE archive. We have estimated the stellar atmospheric parameters, the effective temperature T_eff, the surface gravity log g, and metallicity [Fe/H] from local thermodynamic equilibrium analysis using model atmospheres. We report estimates of elemental abundances for several neutron-capture elements, Sr, Y, Zr, Ba, La, Ce, Pr, Nd, Sm, Eu and Dy. While HD 49641 and HD 58368 show [Ba/Fe] > 1.16 the other two objects HD 119650 and HD 191010 are found to be mild barium stars wit...

  13. Estimating Culicoides sonorensis biting midge abundance using digital image analysis.

    Science.gov (United States)

    Osborne, C J; Mayo, C E; Mullens, B A; Maclachlan, N J

    2014-12-01

    ImageJ is an open-source software tool used for a variety of scientific objectives including cell counting, shape analysis and image correction. This technology has previously been used to estimate mosquito abundance in surveillance efforts. However, the utility of this application for estimating abundance or parity in the surveillance of Culicoides spp. (Diptera: Ceratopogonidae) has not yet been tested. Culicoides sonorensis (Wirth and Jones), a biting midge often measuring 2.0-2.5 mm in length, is an economically important vector of ruminant arboviruses in California. Current surveillance methods use visual sorting for the characteristics of midges and are very time-intensive for large studies. This project tested the utility of ImageJ as a tool to assist in gross trap enumeration as well as in parity analysis of C. sonorensis in comparison with traditional visual methods of enumeration using a dissecting microscope. Results confirmed that automated counting of midges is a reliable means of approximating midge numbers under certain conditions. Further evaluation confirmed accurate and time-efficient parity analysis in comparison with hand sorting. The ImageJ software shows promise as a tool that can assist and expedite C. sonorensis surveillance. Further, these methods may be useful in other insect surveillance activities.

  14. Harmonic Analysis and Group Representation

    CERN Document Server

    Figa-Talamanca, Alessandro

    2011-01-01

    This title includes: Lectures - A. Auslander, R. Tolimeri - Nilpotent groups and abelian varieties, M Cowling - Unitary and uniformly bounded representations of some simple Lie groups, M. Duflo - Construction de representations unitaires d'un groupe de Lie, R. Howe - On a notion of rank for unitary representations of the classical groups, V.S. Varadarajan - Eigenfunction expansions of semisimple Lie groups, and R. Zimmer - Ergodic theory, group representations and rigidity; and, Seminars - A. Koranyi - Some applications of Gelfand pairs in classical analysis.

  15. Life strategies of a ubiquitous and abundant subsurface archaeal group Bathyarchaeota

    Science.gov (United States)

    He, Y.; Li, M.; Perumal, V.; Feng, X.; Sievert, S. M.; Wang, F.

    2015-12-01

    Archaea belonging to the Miscellaneous Crenarchaeota Group (MCG, "Candidatus Bathyarchaeota") are widespread and abundant in the deep biosphere, yet their life strategies and ecological roles remain elusive. Metagenomic sequencing of a sample enriched in Bathyarchaeota (up to 74%) that originated from Guaymas Basin deep-sea vent sediments revealed 6 partial to nearly completed Bathyarchaeota genomic bins. ranging ~900kb-3.3Mb. The Bathyarchaeota bin size ranged from approximately 0.9 to 3.3 Mb, with coverage ranging from approximately 10× to 28×. The phylogeny based on 110 concatenated conserved archaeal single copy genes confirmed the placement of Bathyarchaeota into a novel archaeal phylum. Genes encoding for enzymes involved in the degradation of organic polymers such as protein, cellulose, chitin, and aromatic compounds, were identified. In addition, genes encoding glycolysis/gluconeogenesis, beta-oxidation pathways and the tricarboxylic acid cycle (except citrate synthase) were present in all genomic bins highlighting the heterotrophic life style of Bathyarchaeota. The presence of a wide variety of transporters of organic compounds further supports the versatile heterotrophic metabolism of Bathyarchaeota. This study highlights the life strategies of a ubiquitous and abundant subsurface archaeal group that thrives under energy-limited conditions, and expands the metabolic potentials of Archaea that play important roles in carbon cycling in marine sediments.

  16. Nitrogen Fixation Aligns with nifH Abundance and Expression in Two Coral Trophic Functional Groups

    KAUST Repository

    Pogoreutz, Claudia

    2017-06-28

    Microbial nitrogen fixation (diazotrophy) is a functional trait widely associated with tropical reef-building (scleractinian) corals. While the integral role of nitrogen fixation in coral nutrient dynamics is recognized, its ecological significance across different coral functional groups remains yet to be evaluated. Here we set out to compare molecular and physiological patterns of diazotrophy (i.e., nifH gene abundance and expression as well as nitrogen fixation rates) in two coral families with contrasting trophic strategies: highly heterotrophic, free-living members of the family Fungiidae (Pleuractis granulosa, Ctenactis echinata), and mostly autotrophic coral holobionts with low heterotrophic capacity (Pocilloporidae: Pocillopora verrucosa, Stylophora pistillata). The Fungiidae exhibited low diazotroph abundance (based on nifH gene copy numbers) and activity (based on nifH gene expression and the absence of detectable nitrogen fixation rates). In contrast, the mostly autotrophic Pocilloporidae exhibited nifH gene copy numbers and gene expression two orders of magnitude higher than in the Fungiidae, which coincided with detectable nitrogen fixation activity. Based on these data, we suggest that nitrogen fixation compensates for the low heterotrophic nitrogen uptake in autotrophic corals. Consequently, the ecological importance of diazotrophy in coral holobionts may be determined by the trophic functional group of the host.

  17. Abundance analysis of the recurrent nova RS Ophiuchi (2006 outburst)

    CERN Document Server

    Das, Ramkrishna

    2015-01-01

    We present an analysis of elemental abundances of ejecta of the recurrent nova RS Oph using published optical and near-infrared spectra during the 2006 outburst. We use the CLOUDY photoionization code to generate synthetic spectra by varying several parameters, the model generated spectra are then matched with the observed emission line spectra obtained at two epochs. We obtain the best fit model parameters through the $\\chi^{2}$ minimization technique. Our model results fit well with observed optical and near-infrared spectra. The best-fit model parameters are compatible with a hot white dwarf source with T$_{BB}$ of 5.5 - 5.8 $\\times$ 10$^{5}$ K and roughly constant a luminosity of 6 - 8 $\\times$ 10$^{36}$ ergs s$^{-1}$. From the analysis we find the following abundances (by number) of elements with respect to solar: He/H = 1.8 $\\pm$ 0.1, N/H = 12.0 $\\pm$ 1.0, O/H = 1.0 $\\pm$ 0.4, Ne/H = 1.5 $\\pm$ 0.1, Si/H = 0.4 $\\pm$ 0.1, Fe/H = 3.2 $\\pm$ 0.2, Ar/H = 5.1 $\\pm$ 0.1, and Al/H = 1.0 $\\pm$ 0.1, all other elem...

  18. Group analysis of differential equations

    CERN Document Server

    Ovsiannikov, L V

    1982-01-01

    Group Analysis of Differential Equations provides a systematic exposition of the theory of Lie groups and Lie algebras and its application to creating algorithms for solving the problems of the group analysis of differential equations.This text is organized into eight chapters. Chapters I to III describe the one-parameter group with its tangential field of vectors. The nonstandard treatment of the Banach Lie groups is reviewed in Chapter IV, including a discussion of the complete theory of Lie group transformations. Chapters V and VI cover the construction of partial solution classes for the g

  19. Chemical Abundance Analysis of the Extremely Metal-Poor Star HE 1300+0157

    CERN Document Server

    Frebel, A; Aoki, W; Honda, S; Bessell, M S; Takada-Hidai, M; Beers, T C; Christlieb, N; Frebel, Anna; Norris, John E.; Aoki, Wako; Honda, Satoshi; Bessell, Michael S.; Takada-Hidai, Masahide; Beers, Timothy C.; Christlieb, Norbert

    2006-01-01

    We present a detailed chemical abundance analysis of HE 1300+0157, a subgiant with [Fe/H]=-3.9. From a high-resolution, high-S/N Subaru/HDS spectrum we find the star to be enriched in C ([C/Fe]_1D ~ +1.4) and O ([O/Fe]_1D ~ +1.8). With the exception of these species, HE 1300+0157 exhibits an elemental abundance pattern similar to that found in many other very and extremely metal-poor stars. The Li abundance is lower than the Spite-plateau value, in agreement with expectation for its evolutionary status. Of particular interest, no neutron-capture elements are detected in HE 1300+0157. This type of abundance pattern has been found by recent studies in several other metal-poor giants. We suggest that HE 1300+0157 is an unevolved example of this group of stars, which exhibit high C abundances together with low (or absent) abundances of neutron-capture elements. Several potential enrichment scenarios are presented. The low neutron-capture elements, including Sr, Ba, and Pb, suggests that the carbon excess observed...

  20. FEROS Abundance Analysis of 21 Bulgelike SMR Stars

    Science.gov (United States)

    Trevisan, Marina; Barbuy, Beatriz; Grenon, M.; Gustafsson, B.; Pompéia, L.

    2010-03-01

    We analyze a sample of 21 super-metal-rich (SMR) stars, using high-resolution échelle spectra obtained with the Fiber-fed Extended Range Optical Spectrograph at the 1.5m ESO telescope. The metallicities are in the range 0.07 ≤ [Fe/H] ≤ 0.45, 3 of them in common with Pompéia et al. (2009). Geneva photometry, astrometric data from Hipparcos, and radial velocities from CORAVEL are available for these stars. The peculiar kinematics suggests the thin disk close to the bulge as the probable birthplace of these stars (Grenon 1999). From Hipparcos data, it appears that the turnoff of this population indicates an age of 10-11 Gyr (Grenon 1999). Detailed analysis of the sample stars is carried out, and atmospheric parameters are derived from spectroscopic and photometric determinations. Oxygen abundances of these stars are derived, and [O/Fe] overabundances up to +0.35 are found.

  1. Differential Abundance of Microbial Functional Groups along the Elevation Gradient from the Coast to the Luquillo Mountains

    Science.gov (United States)

    Microbial communities respond to multiple abiotic and biotic factors that change along elevation gradients. We compare changes in microbial community composition in soil and review previous research on differential abundance of microbial functional groups along an elevation gradi...

  2. The photospheric solar oxygen project: I. Abundance analysis of atomic lines and influence of atmospheric models

    CERN Document Server

    Caffau, Elisabetta; Steffen, Matthias; Ayres, Thomas R; Bonifacio, Piercarlo; Cayrel, Roger; Freytag, Bernd; Plez, Bertrand

    2008-01-01

    The solar oxygen abundance has undergone a major downward revision in the last decade, the most noticeable one being the update including 3D hydrodynamical simulations to model the solar photosphere. Up to now, such an analysis has been carried out only by one group using one radiation-hydrodynamics code. We investigate the photospheric oxygen abundance considering lines from atomic transitions. We also consider the relationship between the solar model used and the resulting solar oxygen abundance, to understand whether the downward abundance revision is specifically related to 3D hydrodynamical effects. We perform a new determination of the solar photospheric oxygen abundance by analysing different high-resolution high signal-to-noise ratio atlases of the solar flux and disc-centre intensity making use of the latest generation of CO5BOLD 3D solar model atmospheres. We find 8.73 < logNoxygen/Nhydrogen +12 < 8.79. The lower and upper value represent extreme assumptions on the role of collisional excitati...

  3. Abundance analysis of the slow nova PW Vulpeculae 1984

    CERN Document Server

    Schwarz, G J; Shore, S N; Hauschildt, P H; Schwarz, Greg J.; Shore, Steven N.; Hauschildt, Peter H.

    1997-01-01

    We determine the elemental abundances for the ejecta of the slow nova PW Vul 1984. Our technique uses a minimization of the emission line fits of a photoionization model to available ultraviolet, optical and infrared spectra. We find the following abundances (by number) with respect to solar: He/H = 1.0 $^{+7}_{-2}$. In addition, there is weak evidence for solar Ne and Mg and twice solar Fe. Previous studies (Saizar et al. 1991 and Andreã et al. 1991, 1994) of PW Vul have yielded considerable differences in their derived elemental abundances for the ejecta. Our abundances fall in between the previous studies. To explain the discrepant abundances, we analyze in detail the data and methods used to obtain the previous results. The abundances of Saizar et al. (1991) are significantly smaller then our values because of the lower electron temperature used by Saizar et al. in deriving elemental abundances from ion abundances. Andreã et al. (1991) used an ionization correction method to obtain their abundances and ...

  4. [Group cohesion: a concept analysis].

    Science.gov (United States)

    Lin, Yen-Ru; Chen, Yu-Jung; Tzeng, Wen-Chii; Chou, Kuei-Ru

    2007-10-01

    Group cohesion is considered an essential condition for achieving a successful treatment team. High cohesion groups more readily reach their goals, with group members also feeling more secure about their functions and contributions. In clinical practice, nurses use group teaching and group therapy to help patient and family members gain knowledge and skills related to illness treatment and recuperation. Effective group leadership helps minimize non-productive time and manpower and enhance interpersonal interaction. A further advantage of group cohesion is that the more effective administration of nursing programs that results can raise the profession level of staffs and reduce turnover. Walker and Avant (1995) employ concept analysis to use defining attributes in order to apply the same definition and communication to the same profession. The purpose of this paper was to apply this methodology to an analysis of group cohesion. Steps used include a review of the literature on conceptual definitions of group cohesion, a determination of defining attributes, model construction, identification of borderline, contrary, and related cases, and identification of antecedents and consequences and empirical tools. It is hoped that this analysis can help nursing staff to gain a better understanding of the concept of group cohesion and to apply such to clinical practice and nursing administration.

  5. The abundance and organization of polypeptides associated with antigens of the Rh blood group system.

    Science.gov (United States)

    Gardner, B; Anstee, D J; Mawby, W J; Tanner, M J; von dem Borne, A E

    1991-06-01

    Twelve murine monoclonal antibodies, which react with human red cells of common Rh phenotype but give weak or negative reactions with Rh null erythrocytes, were used in quantitative binding assays and competitive binding assays to investigate the abundance and organization of polypeptides involved in the expression of antigens of the Rh blood group system. Antibodies of the R6A-type (R6A, BRIC-69, BRIC-207) and the 2D10-type (MB-2D10, LA18.18, LA23.40) recognize related structures and 100,000-200,000 molecules of each antibody bind maximally to erythrocytes of common Rh phenotype. Antibodies of the BRIC-125 type (BRICs 32, 122, 125, 126, 168, 211) recognize structures that are unrelated to those recognized by R6A-type and 2D10-type antibodies and between 10,000 and 50,000 antibody molecules bind maximally to erythrocytes of the common Rh phenotype. The binding of antibodies of the R6A-type and the 2D10-type, but not of antibodies of the BRIC-125-type could be partially inhibited by human anti-D antibodies (polyclonal and monoclonal) and a murine anti-e-like antibody. These results are consistent with evidence (Moore & Green 1987; Avent et al., 1988b) that the Rh blood group antigens are associated with a complex that comprises two groups of related polypeptides of M(r) 30,000 and M(r) 35,000-100,000, respectively, and suggest that there are 1-2 x 10(5) copies of this complex per erythrocyte. The polypeptide recognized by antibodies of the BRIC-125 type is likely to be associated with this complex.

  6. Monitoring change in the abundance and distribution of insects using butterflies and other indicator groups.

    Science.gov (United States)

    Thomas, J A

    2005-02-28

    Conservative estimates suggest that 50-90% of the existing insect species on Earth have still to be discovered, yet the named insects alone comprise more than half of all known species of organism. With such poor baseline knowledge, monitoring change in insect diversity poses a formidable challenge to scientists and most attempts to generalize involve large extrapolations from a few well-studied taxa. Butterflies are often the only group for which accurate measures of change can be obtained. Four schemes, used successfully to assess change in British butterflies, that are increasingly being applied across the world are described: Red Data Books (RDB) list the best judgements of experts of the conservation status of species in their field of expertise; mapping schemes plot the changing distributions of species at scales of 1-100 km2; transect monitoring schemes generate time series of changes in abundance in sample populations of species on fixed sites across the UK; and occasional surveys measure the number, boundaries and size of all populations of a (usually RDB) species at intervals of 10-30 years. All schemes describe consistent patterns of change, but if they are to be more generally useful, it is important to understand how well butterflies are representative of other taxa. Comparisons with similarly measured changes in native bird and plant species suggest that butterflies have declined more rapidly that these other groups in Britain; it should soon be possible to test whether this pattern exists elsewhere. It is also demonstrated that extinction rates in British butterflies are similar to those in a range of other insect groups over 100 years once recording bias is accounted for, although probably lower than in aquatic or parasitic taxa. It is concluded that butterflies represent adequate indicators of change for many terrestrial insect groups, but recommended that similar schemes be extended to other popular groups, especially dragonflies, bumblebees

  7. Analysis and modeling of scale-invariance in plankton abundance

    CERN Document Server

    Pelletier, J D

    1996-01-01

    The power spectrum, $S$, of horizontal transects of plankton abundance are often observed to have a power-law dependence on wavenumber, $k$, with exponent close to $-2$: $S(k)\\propto k^{-2}$ over a wide range of scales. I present power spectral analyses of aircraft lidar measurements of phytoplankton abundance from scales of 1 to 100 km. A power spectrum $S(k)\\propto k^{-2}$ is obtained. As a model for this observation, I consider a stochastic growth equation where the rate of change of plankton abundance is determined by turbulent mixing, modeled as a diffusion process in two dimensions, and exponential growth with a stochastically variable net growth rate representing a fluctuating environment. The model predicts a lognormal distribution of abundance and a power spectrum of horizontal transects $S(k)\\propto k^{-1.8}$, close to the observed spectrum. The model equation predicts that the power spectrum of variations in abundance in time at a point in space is $S(f)\\propto f^{-1.5}$ (where $f$ is the frequency...

  8. A holistic abundance analysis of r-rich stars

    CERN Document Server

    Zhang, Jiang; Zhang, Bo; 10.1111/j.1365-2966.2010.17374.x

    2010-01-01

    The chemical abundances of metal-poor stars are an excellent test bed by which to set new constraints on models of neutron-capture processes at low metallicity. Some r-process-rich (hereafter r-rich) metal-poor stars, such as HD221170, show an overabundance of the heavier neutron-capture elements and excesses of lighter neutron-capture elements. The study of these r-rich stars could give us a better understanding of weak and main r-process nucleosynthesis at low metallicity. Based on conclusions from the observation of metal-poor stars and neutron-capture element nucleosynthesis theory, we set up a model to determine the relative contributions from weak and main r-processes to the heavy-element abundances in metal-poor stars. Using this model, we find that the abundance patterns of light elements for most sample stars are close to the pattern of weak r-process stars, and those of heavier neutron-capture elements very similar to the pattern of main r-process stars, while the lighter neutron-capture elements ca...

  9. Statistical analysis of Fe abundances gradients in the Galaxy

    Institute of Scientific and Technical Information of China (English)

    崔辰州; 赵刚; 赵永恒; 施建荣

    2001-01-01

    Using the high precision data of the proper motions and parallaxes from Hipparcos catalogue, we obtained the orbital parameters of 1302 stars in the Galaxy based on the mass distribution model provided by Allen and Santillán. Fe abundances of 1295 stars among our samples were analyzed. With the correlation analyses between [Fe/H] and orbital parameters, we obtained that the Fe gradient is -0.057±0.007 dex/kpc along the direction of the maximum galactocentric distance (hereafter DGmax) in the range of 8.5 kpc<DGmax<17 kpc. We also got the result that the vertical gradient is steeper than the radial gradient. Furthermore, we divided the samples into two subgroups: giants and dwarfs; F, G and K stars; and then analyzed them respectively. Our results show that the gradient becomes flatter and flatter from giants to dwarfs, from F type to G and K type stars. We also divided the samples into disk and halo stars using maximum vertical distance Zmax=1 kpc as the criterion and got the result that the abundances of the disk stars are much higher than that of the halo stars. Our work suggests the existence of the galactic gradient and supports those chemical evolution medels which show that the halo was formed before the disk at the early stage of the Galaxy.

  10. Abundance and Relative Distribution of Frankia Host Infection Groups Under Actinorhizal Alnus glutinosa and Non-actinorhizal Betula nigra Trees.

    Science.gov (United States)

    Samant, Suvidha; Huo, Tian; Dawson, Jeffrey O; Hahn, Dittmar

    2016-02-01

    Quantitative polymerase chain reaction (qPCR) was used to assess the abundance and relative distribution of host infection groups of the root-nodule forming, nitrogen-fixing actinomycete Frankia in four soils with similar physicochemical characteristics, two of which were vegetated with a host plant, Alnus glutinosa, and two with a non-host plant, Betula nigra. Analyses of DAPI-stained cells at three locations, i.e., at a distance of less than 1 m (near stem), 2.5 m (middle crown), and 3-5 m (crown edge) from the stems of both tree species revealed no statistically significant differences in abundance. Frankiae generally accounted for 0.01 to 0.04 % of these cells, with values between 4 and 36 × 10(5) cells (g soil)(-1). In three out of four soils, abundance of frankiae was significantly higher at locations "near stem" and/or "middle crown" compared to "crown edge," while numbers at these locations were not different in the fourth soil. Frankiae of the Alnus host infection group were dominant in all samples accounting for about 75 % and more of the cells, with no obvious differences with distance to stem. In three of the soils, all of these cells were represented by strain Ag45/Mut15. In the fourth soil that was vegetated with older A. glutinosa trees, about half of these cells belonged to a different subgroup represented by strain ArI3. In all soils, the remaining cells belonged to the Elaeagnus host infection group represented by strain EAN1pec. Casuarina-infective frankiae were not found. Abundance and relative distribution of Frankia host infection groups were similar in soils under the host plant A. glutinosa and the non-host plant B. nigra. Results did thus not reveal any specific effects of plant species on soil Frankia populations.

  11. The Effects of Organic Agriculture on Biodiversity and Abundance: A Meta-Analysis

    National Research Council Canada - National Science Library

    Janne Bengtsson; Johan Ahnström; Ann-Christin Weibull

    2005-01-01

    .... It has been suggested that this system enhances biodiversity in agricultural landscapes. We analysed the effects of organic farming on species richness and abundance using meta-analysis of literature published before December 2002. 2...

  12. Relative abundance of water-group ions in Saturn's inner magnetosphere

    Science.gov (United States)

    Perry, Mark E.; Cravens, Thomas; Tokar, Robert; Smith, Howard T.; Perryman, Rebecca; Waite, J. Hunter; McNutt, Ralph L.

    2016-10-01

    At nineteen different times over seven years, the Cassini Ion Neutral Mass Spectrometer (INMS) measured the relative fractions of water-group ions in the inner magnetosphere of Saturn near the equatorial plane between 3.8 and 6.5 Saturn radii (RS). INMS samples only a small portion of velocity space in any one measurement, but the measurements span a broad range of velocity space. The data show that H2O+ comprises the bulk of the ions near 4.0 RS, and that its fraction decreases with increasing distance from 4.0 RS, the source of neutral water at Enceladus. At 4.0 RS, the fraction of H2O+ ranges from 60% to 100%, with an average of 80%. At 6.5 RS, the three main water-group constituents, H2O+, OH+, and O+, are nearly equal. H3O+, which dominates the water-group ion fractions in the Enceladus plume, is 10% or less in Saturn's magnetosphere outside the plume. The relative ion fractions show other variations that are not clearly linked to any of the studied parameters including velocity, density, and the orbit-phase-dependent activity of Enceladus.

  13. Abundance analysis of the halo giant HD 122563 with three-dimensional model stellar atmospheres

    Science.gov (United States)

    Collet, R.; Nordlund, Å.; Asplund, M.; Hayek, W.; Trampedach, R.

    We present a preliminary local thermodynamic equilibrium (LTE) abundance analysis of the template halo red giant HD122563 based on a realistic, three-dimensional (3D), time-dependent, hydrodynamical model atmosphere of the very metal-poor star. We compare the results of the 3D analysis with the abundances derived by means of a standard LTE analysis based on a classical, 1D, hydrostatic model atmosphere of the star. Due to the different upper photospheric temperature stratifications predicted by 1D and 3D models, we find large, negative, 3D-1D LTE abundance differences for low-excitation OH and Fe I lines. We also find trends with lower excitation potential in the derived Fe LTE abundances from Fe I lines, in both the 1D and 3D analyses. Such trends may be attributed to the neglected departures from LTE in the spectral line formation calculations.

  14. Abundance Analysis of the Halo Giant HD122563 with Three-Dimensional Model Stellar Atmospheres

    CERN Document Server

    Collet, R; Asplund, M; Hayek, W; Trampedach, R

    2009-01-01

    We present a preliminary local thermodynamic equilibrium (LTE) abundance analysis of the template halo red giant HD122563 based on a realistic, three-dimensional (3D), time-dependent, hydrodynamical model atmosphere of the very metal-poor star. We compare the results of the 3D analysis with the abundances derived by means of a standard LTE analysis based on a classical, 1D, hydrostatic model atmosphere of the star. Due to the different upper photospheric temperature stratifications predicted by 1D and 3D models, we find large, negative, 3D-1D LTE abundance differences for low-excitation OH and Fe I lines. We also find trends with lower excitation potential in the derived Fe LTE abundances from Fe I lines, in both the 1D and 3D analyses. Such trends may be attributed to the neglected departures from LTE in the spectral line formation calculations.

  15. Characterization of a group 1 late embryogenesis abundant protein in encysted embryos of the brine shrimp Artemia franciscana.

    Science.gov (United States)

    Sharon, Michelle A; Kozarova, Anna; Clegg, James S; Vacratsis, Panayiotis O; Warner, Alden H

    2009-04-01

    Late embryogenesis abundant (LEA) proteins are hydrophilic molecules that are believed to function in desiccation and low-temperature tolerance in some plants and plant propagules, certain prokaryotes, and several animal species. The brine shrimp Artemia franciscana can produce encysted embryos (cysts) that enter diapause and are resistant to severe desiccation. This ability is based on biochemical adaptations, one of which appears to be the accumulation of the LEA protein that is the focus of this study. The studies described herein characterize a 21 kDa protein in encysted Artemia embryos as a group 1 LEA protein. The amino acid sequence of this protein and its gene have been determined and entered into the NCBI database (no. EF656614). The LEA protein consists of 182 amino acids and it is extremely hydrophilic, with glycine (23%), glutamine (17%), and glutamic acid (12.6%) being the most abundant amino acids. This protein also consists of 8 tandem repeats of a 20 amino acid sequence, which is characteristic of group 1 LEA proteins from non-animal species. The LEA protein and its gene are expressed only in encysted embryos and not in larvae or adults. Evidence is presented to show that the LEA protein functions in the prevention of drying-induced protein aggregation, which supports its functional role in desiccation tolerance. This report describes, for the first time, the purification and characterization of a group 1 LEA protein from an animal species.

  16. THE ABUNDANCES OF HYDROCARBON FUNCTIONAL GROUPS IN THE INTERSTELLAR MEDIUM INFERRED FROM LABORATORY SPECTRA OF HYDROGENATED AND METHYLATED POLYCYCLIC AROMATIC HYDROCARBONS

    Energy Technology Data Exchange (ETDEWEB)

    Steglich, M.; Jäger, C.; Huisken, F. [Laboratory Astrophysics Group of the Max Planck Institute for Astronomy at the Friedrich Schiller University Jena, Institute of Solid State Physics, Helmholtzweg 3, D-07743 Jena (Germany); Friedrich, M.; Plass, W. [Institute of Inorganic and Analytical Chemistry, Friedrich Schiller University Jena, Humboldtstraße 8, D-07743 Jena (Germany); Räder, H.-J.; Müllen, K. [Max Planck Institute for Polymer Research, Ackermannweg 10, D-55128 Mainz (Germany); Henning, Th., E-mail: M.Steglich@web.de [Max Planck Institute for Astronomy, Königstuhl 17, D-69117 Heidelberg (Germany)

    2013-10-01

    Infrared (IR) absorption spectra of individual polycyclic aromatic hydrocarbons (PAHs) containing methyl (-CH{sub 3}), methylene (CH{sub 2}), or diamond-like CH groups and IR spectra of mixtures of methylated and hydrogenated PAHs prepared by gas-phase condensation were measured at room temperature (as grains in pellets) and at low temperature (isolated in Ne matrices). In addition, the PAH blends were subjected to an in-depth molecular structure analysis by means of high-performance liquid chromatography, nuclear magnetic resonance spectroscopy, and matrix-assisted laser desorption/ionization time-of-flight mass spectrometry. Supported by calculations at the density functional theory level, the laboratory results were applied to analyze in detail the aliphatic absorption complex of the diffuse interstellar medium at 3.4 μm and to determine the abundances of hydrocarbon functional groups. Assuming that the PAHs are mainly locked in grains, aliphatic CH {sub x} groups (x = 1, 2, 3) would contribute approximately in equal quantities to the 3.4 μm feature (N {sub CHx}/N {sub H} ≈ 10{sup –5}-2 × 10{sup –5}). The abundances, however, may be two to four times lower if a major contribution to the 3.4 μm feature comes from molecules in the gas phase. Aromatic ≅CH groups seem to be almost absent from some lines of sight, but can be nearly as abundant as each of the aliphatic components in other directions (N{sub ≅CH}/N {sub H} ∼< 2 × 10{sup –5}; upper value for grains). Due to comparatively low binding energies, astronomical IR emission sources do not display such heavy excess hydrogenation. At best, especially in protoplanetary nebulae, CH{sub 2} groups bound to aromatic molecules, i.e., excess hydrogens on the molecular periphery only, can survive the presence of a nearby star.

  17. Experimental and theoretical oscillator strengths of Mg I for accurate abundance analysis

    CERN Document Server

    Rhodin, A Pehlivan; Nilsson, H; Jonsson, P

    2016-01-01

    Context. With the aid of stellar abundance analysis, it is possible to study the galactic formation and evolution. Magnesium is an important element to trace the alpha-element evolution in our Galaxy. For chemical abundance analysis, such as magnesium abundance, accurate and complete atomic data are essential. Inaccurate atomic data lead to uncertain abundances and prevent discrimination between different evolution models. Aims. We study the spectrum of neutral magnesium from laboratory measurements and theoretical calculations. Our aim is to improve the oscillator strengths ( f -values) of Mg I lines and to create a complete set of accurate atomic data, particularly for the near-IR region. Methods. We derived oscillator strengths by combining the experimental branching fractions with radiative lifetimes reported in the literature and computed in this work. A hollow cathode discharge lamp was used to produce free atoms in the plasma and a Fourier transform spectrometer recorded the intensity-calibrated high-r...

  18. HOLOMORPHIC HARMONIC ANALYSIS ON COMPLEX REDUCTIVE GROUPS

    Institute of Scientific and Technical Information of China (English)

    An Jinpeng; Qian Min; Wang Zhengdong

    2008-01-01

    The authors define the holomorphic Fourier transform of holomorphic func-tions on complex reductive groups, prove some properties such as the Fourier inversion formula, and give some applications. The definition of the holomorphic Fourier transform makes use of the notion of K-admissible measures. The authors prove that K-admissible measures are abundant, and the definition of holomorphic Fourier transform is independent of the choice of K-admissible measures.

  19. Renormalization group analysis of turbulence

    Science.gov (United States)

    Smith, Leslie M.

    1989-01-01

    The objective is to understand and extend a recent theory of turbulence based on dynamic renormalization group (RNG) techniques. The application of RNG methods to hydrodynamic turbulence was explored most extensively by Yakhot and Orszag (1986). An eddy viscosity was calculated which was consistent with the Kolmogorov inertial range by systematic elimination of the small scales in the flow. Further, assumed smallness of the nonlinear terms in the redefined equations for the large scales results in predictions for important flow constants such as the Kolmogorov constant. It is emphasized that no adjustable parameters are needed. The parameterization of the small scales in a self-consistent manner has important implications for sub-grid modeling.

  20. X-Ray Evidence for Multiphase Hot Gas with Nearly Solar Fe Abundances in the Brightest Groups of Galaxies

    CERN Document Server

    Buote, D A

    1999-01-01

    We analyze the ASCA spectra accumulated within ~100 kpc radii of 12 of the brightest groups of galaxies. Upon fitting isothermal models (1T) jointly to the ASCA SIS and GIS spectra we obtain fits for most groups that are of poor or at best marginal quality and give very sub-solar metallicities similar to previous studies, = 0.29 +/- 0.12 Z_sun. Two-temperature models (2T) provide significantly better fits for 11 out of the 12 groups and in every case have metallicities that are substantially larger than obtained for the 1T models, = 0.75 +/- 0.24 Z_sun. Although not very well constrained, for most of the groups absorption in excess of the Galactic value is indicated for the cooler temperature component of the 2T models. A simple multiphase cooling flow model gives results analogous to the 2T models including large metallicities, = 0.65 +/- 0.17 Z_sun. The nearly solar Fe abundances and also solar alpha/Fe ratios indicated by the 2T and cooling flow models are consistent with the standard models of chemical...

  1. Group theory analysis of braided geometry structures

    Institute of Scientific and Technical Information of China (English)

    FENG Wei; MA Wensuo

    2005-01-01

    The braided geometry structures are analyzed with point groups and space groups for which the continuous yarn of the braided preforms is segmented and expressed in some special symbols. All structures of braided material are described and classified with group theory, and new braiding methods are found. The group theory analysis lays the theoretical foundation for optimizing material performance.

  2. Spectroscopic abundance analysis of dwarfs in young open cluster IC 4665

    CERN Document Server

    Shen, Z X; Lin, D N C; Liu, X W; Li, S L

    2005-01-01

    We report a detailed spectroscopic abundance analysis for a sample of 18 F-K dwarfs of the young open cluster IC 4665. Stellar parameters and element abundances of Li, O, Mg, Si, Ca, Ti, Cr, Fe and Ni have been derived using the spectroscopic synthesis tool SME (Spectroscopy Made Easy). Within the measurement uncertainties the iron abundance is uniform with a standard deviation of 0.04 dex. No correlation is found between the iron abundance and the mass of the stellar convective zone, and between the Li abundance and the Fe abundance. In other words, our results do not reveal any signature of accretion and therefore do not support the scenario that stars with planets (SWPs) acquire their on the average higher metallicity compared to field stars via accretion of metal-rich planetary material. Instead the higher metallicity of SWPs may simply reflect the fact that planet formation is more efficient in high metallicity environs. However, since that many details of the planet system formation processes remain poo...

  3. The impact of land abandonment on species richness and abundance in the Mediterranean Basin: a meta-analysis.

    Directory of Open Access Journals (Sweden)

    Tobias Plieninger

    Full Text Available Land abandonment is common in the Mediterranean Basin, a global biodiversity hotspot, but little is known about its impacts on biodiversity. To upscale existing case-study insights to the Pan-Mediterranean level, we conducted a meta-analysis of the effects of land abandonment on plant and animal species richness and abundance in agroforestry, arable land, pastures, and permanent crops of the Mediterranean Basin. In particular, we investigated (1 which taxonomic groups (arthropods, birds, lichen, vascular plants are more affected by land abandonment; (2 at which spatial and temporal scales the effect of land abandonment on species richness and abundance is pronounced; (3 whether previous land use and current protected area status affect the magnitude of changes in the number and abundance of species; and (4 how prevailing landforms and climate modify the impacts of land abandonment. After identifying 1240 potential studies, 154 cases from 51 studies that offered comparisons of species richness and abundance and had results relevant to our four areas of investigation were selected for meta-analysis. Results are that land abandonment showed slightly increased (effect size  = 0.2109, P<0.0001 plant and animal species richness and abundance overall, though results were heterogeneous, with differences in effect size between taxa, spatial-temporal scales, land uses, landforms, and climate. In conclusion, there is no "one-size-fits-all" conservation approach that applies to the diverse contexts of land abandonment in the Mediterranean Basin. Instead, conservation policies should strive to increase awareness of this heterogeneity and the potential trade-offs after abandonment. The strong role of factors at the farm and landscape scales that was revealed by the analysis indicates that purposeful management at these scales can have a powerful impact on biodiversity.

  4. Abundance analysis of 5 early-type stars in the young open cluster IC2391

    CERN Document Server

    Stuetz, C; Jehin, E; Ledoux, C; Cabanac, R A; Melo, C; Smoker, J V; Stuetz, Ch.

    2006-01-01

    It is unclear whether chemically peculiar stars of the upper main sequence represent a class completely distinct from normal A-type stars, or whether there exists a continuous transition from the normal to the most peculiar late F- to early B-type stars. A systematic abundance analysis of open cluster early-type stars would help to relate the observed differences of the chemical abundances of the photospheres to other stellar characteristics, without being concerned by possible different original chemical composition. Furthermore, if a continuous transition region from the very peculiar to the so called normal A-F stars exists, it should be possible to detect objects with mild peculiarities. As a first step of a larger project, an abundance analysis of 5 F-A type stars in the young cluster IC2391 was performed using high resolution spectra obtained with the UVES instrument of the ESO VLT. Our targets seem to follow a general abundance pattern: close to solar abundance of the light elements and iron peak eleme...

  5. Conformation of a group 2 late embryogenesis abundant protein from soybean. Evidence of poly (L-proline)-type II structure.

    Science.gov (United States)

    Soulages, Jose L; Kim, Kangmin; Arrese, Estela L; Walters, Christina; Cushman, John C

    2003-03-01

    Late embryogenesis abundant (LEA) proteins are members of a large group of hydrophilic, glycine-rich proteins found in plants, algae, fungi, and bacteria known collectively as hydrophilins that are preferentially expressed in response to dehydration or hyperosmotic stress. Group 2 LEA (dehydrins or responsive to abscisic acid) proteins are postulated to stabilize macromolecules against damage by freezing, dehydration, ionic, or osmotic stress. However, the structural and physicochemical properties of group 2 LEA proteins that account for such functions remain unknown. We have analyzed the structural properties of a recombinant form of a soybean (Glycine max) group 2 LEA (rGmDHN1). Differential scanning calorimetry of purified rGmDHN1 demonstrated that the protein does not display a cooperative unfolding transition upon heating. Ultraviolet absorption and circular dichroism spectroscopy revealed that the protein is in a largely hydrated and unstructured conformation in solution. However, ultraviolet absorption and circular dichroism measurements collected at different temperatures showed that the protein exists in equilibrium between two extended conformational states: unordered and left-handed extended helical or poly (L-proline)-type II structures. It is estimated that 27% of the residues of rGmDHN1 adopt or poly (L-proline)-type II-like helical conformation at 12 degrees C. The content of extended helix gradually decreases to 15% as the temperature is increased to 80 degrees C. Studies of the conformation of the protein in solution in the presence of liposomes, trifluoroethanol, and sodium dodecyl sulfate indicated that rGmDHN1 has a very low intrinsic ability to adopt alpha-helical structure and to interact with phospholipid bilayers through amphipathic alpha-helices. The ability of the protein to remain in a highly extended conformation at low temperatures could constitute the basis of the functional role of GmDHN1 in the prevention of freezing, desiccation

  6. Study of model systems to test the potential function of Artemia group 1 late embryogenesis abundant (LEA) proteins.

    Science.gov (United States)

    Warner, Alden H; Guo, Zhi-hao; Moshi, Sandra; Hudson, John W; Kozarova, Anna

    2016-01-01

    Embryos of the brine shrimp, Artemia franciscana, are genetically programmed to develop either ovoviparously or oviparously depending on environmental conditions. Shortly upon their release from the female, oviparous embryos enter diapause during which time they undergo major metabolic rate depression while simultaneously synthesize proteins that permit them to tolerate a wide range of stressful environmental events including prolonged periods of desiccation, freezing, and anoxia. Among the known stress-related proteins that accumulate in embryos entering diapause are the late embryogenesis abundant (LEA) proteins. This large group of intrinsically disordered proteins has been proposed to act as molecular shields or chaperones of macromolecules which are otherwise intolerant to harsh conditions associated with diapause. In this research, we used two model systems to study the potential function of the group 1 LEA proteins from Artemia. Expression of the Artemia group 1 gene (AfrLEA-1) in Escherichia coli inhibited growth in proportion to the number of 20-mer amino acid motifs expressed. As well, clones of E. coli, transformed with the AfrLEA-1 gene, expressed multiple bands of LEA proteins, either intrinsically or upon induction with isopropyl-β-thiogalactoside (IPTG), in a vector-specific manner. Expression of AfrLEA-1 in E. coli did not overcome the inhibitory effects of high concentrations of NaCl and KCl but modulated growth inhibition resulting from high concentrations of sorbitol in the growth medium. In contrast, expression of the AfrLEA-1 gene in Saccharomyces cerevisiae did not alter the growth kinetics or permit yeast to tolerate high concentrations of NaCl, KCl, or sorbitol. However, expression of AfrLEA-1 in yeast improved its tolerance to drying (desiccation) and freezing. Under our experimental conditions, both E. coli and S. cerevisiae appear to be potentially suitable hosts to study the function of Artemia group 1 LEA proteins under environmentally

  7. Abundance and single-cell activity of heterotrophic bacterial groups in the western Arctic Ocean in summer and winter.

    Science.gov (United States)

    Nikrad, Mrinalini P; Cottrell, M T; Kirchman, D L

    2012-04-01

    Environmental conditions in the western Arctic Ocean range from constant light and nutrient depletion in summer to complete darkness and sea ice cover in winter. This seasonal environmental variation is likely to have an effect on the use of dissolved organic matter (DOM) by heterotrophic bacteria in surface water. However, this effect is not well studied and we know little about the activity of specific bacterial clades in the surface oceans. The use of DOM by three bacterial subgroups in both winter and summer was examined by microautoradiography combined with fluorescence in situ hybridization. We found selective use of substrates by these groups, although the abundances of Ant4D3 (Antarctic Gammaproteobacteria), Polaribacter (Bacteroidetes), and SAR11 (Alphaproteobacteria) were not different between summer and winter in the Beaufort and Chukchi Seas. The number of cells taking up glucose within all three bacterial groups decreased significantly from summer to winter, while the percentage of cells using leucine did not show a clear pattern between seasons. The uptake of the amino acid mix increased substantially from summer to winter by the Ant4D3 group, although such a large increase in uptake was not seen for the other two groups. Use of glucose by bacteria, but not use of leucine or the amino acid mix, related strongly to inorganic nutrients, chlorophyll a, and other environmental factors. Our results suggest a switch in use of dissolved organic substrates from summer to winter and that the three phylogenetic subgroups examined fill different niches in DOM use in the two seasons.

  8. Chemical abundance analysis of the Open Clusters Berkeley 32, NGC 752, Hyades and Praesepe

    CERN Document Server

    Carrera, R

    2011-01-01

    Context. Open clusters are ideal test particles to study the chemical evolution of the Galactic disc. However the existing high-resolution abundance determinations, not only of [Fe/H], but also of other key elements, is largely insufficient at the moment. Aims. To increase the number of Galactic open clusters with high quality abundance determinations, and to gather all the literature determinations published so far. Methods. Using high-resolution (R~30000), high-quality (S/N$>60 per pixel), we obtained spectra for twelve stars in four open clusters with the fiber spectrograph FOCES, at the 2.2 Calar Alto Telescope in Spain. We use the classical equivalent widths analysis to obtain accurate abundances of sixteen elements: Al, Ba, Ca, Co, Cr, Fe, La, Mg, Na, Nd, Ni, Sc, Si, Ti, V, Y. Oxygen abundances have been derived through spectral synthesis of the 6300 A forbidden line. Results. We provide the first determination of abundance ratios other than Fe for NGC 752 giants, and ratios in agreement with the litera...

  9. Neon and CNO Abundances for Extreme Helium Stars -- A Non-LTE Analysis

    CERN Document Server

    Pandey, Gajendra

    2010-01-01

    A non-LTE (NLTE) abundance analysis was carried out for three extreme helium stars (EHes): BD+10 2179, BD-9 4395, and LS IV+6 002, from their optical spectra with NLTE model atmospheres. NLTE TLUSTY model atmospheres were computed with H, He, C, N, O, and Ne treated in NLTE. Model atmosphere parameters were chosen from consideration of fits to observed He I line profiles and ionization equilibria of C and N ions. The program SYNSPEC was then used to determine the NLTE abundances for Ne as well as H, He, C, N, and O. LTE neon abundances from Ne I lines in the EHes: LSE 78, V1920 Cyg, HD 124448, and PV Tel, are derived from published models and an estimate of the NLTE correction applied to obtain the NLTE Ne abundance. We show that the derived abundances of these key elements, including Ne, are well matched with semi-quantitative predictions for the EHe resulting from a cold merger (i.e., no nucleosynthesis during the merger) of a He white dwarf with a C-O white dwarf.

  10. Neon and CNO Abundances for Extreme Helium Stars—A Non-LTE Analysis

    Science.gov (United States)

    Pandey, Gajendra; Lambert, David L.

    2011-02-01

    A non-LTE (NLTE) abundance analysis was carried out for three extreme helium stars (EHes): BD+10° 2179, BD-9° 4395, and LS IV+6° 002, from their optical spectra with NLTE model atmospheres. NLTE TLUSTY model atmospheres were computed with H, He, C, N, O, and Ne treated in NLTE. Model atmosphere parameters were chosen from consideration of fits to observed He I line profiles and ionization equilibria of C and N ions. The program SYNSPEC was then used to determine the NLTE abundances for Ne as well as H, He, C, N, and O. LTE neon abundances from Ne I lines in the EHes: LSE 78, V1920 Cyg, HD 124448, and PV Tel, are derived from published models and an estimate of the NLTE correction applied to obtain the NLTE Ne abundance. We show that the derived abundances of these key elements, including Ne, are well matched with semi-quantitative predictions for the EHe resulting from a cold merger (i.e., no nucleosynthesis during the merger) of an He white dwarf with a C-O white dwarf.

  11. Exoproteome analysis reveals higher abundance of proteins linked to alkaline stress in persistent Listeria monocytogenes strains.

    Science.gov (United States)

    Rychli, Kathrin; Grunert, Tom; Ciolacu, Luminita; Zaiser, Andreas; Razzazi-Fazeli, Ebrahim; Schmitz-Esser, Stephan; Ehling-Schulz, Monika; Wagner, Martin

    2016-02-02

    The foodborne pathogen Listeria monocytogenes, responsible for listeriosis a rare but severe infection disease, can survive in the food processing environment for month or even years. So-called persistent L. monocytogenes strains greatly increase the risk of (re)contamination of food products, and are therefore a great challenge for food safety. However, our understanding of the mechanism underlying persistence is still fragmented. In this study we compared the exoproteome of three persistent strains with the reference strain EGDe under mild stress conditions using 2D differential gel electrophoresis. Principal component analysis including all differentially abundant protein spots showed that the exoproteome of strain EGDe (sequence type (ST) 35) is distinct from that of the persistent strain R479a (ST8) and the two closely related ST121 strains 4423 and 6179. Phylogenetic analyses based on multilocus ST genes showed similar grouping of the strains. Comparing the exoproteome of strain EGDe and the three persistent strains resulted in identification of 22 differentially expressed protein spots corresponding to 16 proteins. Six proteins were significantly increased in the persistent L. monocytogenes exoproteomes, among them proteins involved in alkaline stress response (e.g. the membrane anchored lipoprotein Lmo2637 and the NADPH dehydrogenase NamA). In parallel the persistent strains showed increased survival under alkaline stress, which is often provided during cleaning and disinfection in the food processing environments. In addition, gene expression of the proteins linked to stress response (Lmo2637, NamA, Fhs and QoxA) was higher in the persistent strain not only at 37 °C but also at 10 °C. Invasion efficiency of EGDe was higher in intestinal epithelial Caco2 and macrophage-like THP1 cells compared to the persistent strains. Concurrently we found higher expression of proteins involved in virulence in EGDe e.g. the actin-assembly-inducing protein ActA and the

  12. CD -24_17504 revisited: a new comprehensive element abundance analysis

    CERN Document Server

    Jacobson, Heather R

    2015-01-01

    With [Fe/H] ~ -3.3, CD -24_17504 is a canonical metal-poor main sequence turn-off star. Though it has appeared in numerous literature studies, the most comprehensive abundance analysis for the star based on high resolution, high signal-to-noise spectra is nearly 15 years old. We present a new detailed abundance analysis for 21 elements based on combined archival Keck-HIRES and VLT-UVES spectra of the star that is higher in both spectral resolution and signal-to-noise than previous data. Our results for many elements are very similar to those of an earlier comprehensive study of the star, but we present for the first time a carbon abundance from the CH G-band feature as well as improved upper limits for neutron-capture species such as Y, Ba and Eu. In particular, we find that CD -24_17504 has [Fe/H] = -3.41, [C/Fe] = +1.10, [Sr/H] = -4.68 and [Ba/H] <= -4.46, making it a carbon enhanced metal-poor star with neutron-capture element abundances among the lowest measured in Milky Way halo stars.

  13. Group adaptation, formal darwinism and contextual analysis.

    Science.gov (United States)

    Okasha, S; Paternotte, C

    2012-06-01

    We consider the question: under what circumstances can the concept of adaptation be applied to groups, rather than individuals? Gardner and Grafen (2009, J. Evol. Biol.22: 659-671) develop a novel approach to this question, building on Grafen's 'formal Darwinism' project, which defines adaptation in terms of links between evolutionary dynamics and optimization. They conclude that only clonal groups, and to a lesser extent groups in which reproductive competition is repressed, can be considered as adaptive units. We re-examine the conditions under which the selection-optimization links hold at the group level. We focus on an important distinction between two ways of understanding the links, which have different implications regarding group adaptationism. We show how the formal Darwinism approach can be reconciled with G.C. Williams' famous analysis of group adaptation, and we consider the relationships between group adaptation, the Price equation approach to multi-level selection, and the alternative approach based on contextual analysis.

  14. The impact of land abandonment on species richness and abundance in the Mediterranean Basin: a meta-analysis.

    Science.gov (United States)

    Plieninger, Tobias; Hui, Cang; Gaertner, Mirijam; Huntsinger, Lynn

    2014-01-01

    Land abandonment is common in the Mediterranean Basin, a global biodiversity hotspot, but little is known about its impacts on biodiversity. To upscale existing case-study insights to the Pan-Mediterranean level, we conducted a meta-analysis of the effects of land abandonment on plant and animal species richness and abundance in agroforestry, arable land, pastures, and permanent crops of the Mediterranean Basin. In particular, we investigated (1) which taxonomic groups (arthropods, birds, lichen, vascular plants) are more affected by land abandonment; (2) at which spatial and temporal scales the effect of land abandonment on species richness and abundance is pronounced; (3) whether previous land use and current protected area status affect the magnitude of changes in the number and abundance of species; and (4) how prevailing landforms and climate modify the impacts of land abandonment. After identifying 1240 potential studies, 154 cases from 51 studies that offered comparisons of species richness and abundance and had results relevant to our four areas of investigation were selected for meta-analysis. Results are that land abandonment showed slightly increased (effect size  = 0.2109, Plandforms, and climate. In conclusion, there is no "one-size-fits-all" conservation approach that applies to the diverse contexts of land abandonment in the Mediterranean Basin. Instead, conservation policies should strive to increase awareness of this heterogeneity and the potential trade-offs after abandonment. The strong role of factors at the farm and landscape scales that was revealed by the analysis indicates that purposeful management at these scales can have a powerful impact on biodiversity.

  15. Analysis of the plasma proteome in COPD: Novel low abundance proteins reflect the severity of lung remodeling.

    Science.gov (United States)

    Merali, Salim; Barrero, Carlos A; Bowler, Russell P; Chen, Diane Er; Criner, Gerard; Braverman, Alan; Litwin, Samuel; Yeung, Anthony; Kelsen, Steven G

    2014-04-01

    The search for COPD biomarkers has largely employed a targeted approach that focuses on plasma proteins involved in the systemic inflammatory response and in lung injury and repair. This proof of concept study was designed to test the idea that an open, unbiased, in-depth proteomics approach could identify novel, low abundance plasma proteins i.e., ng/mL concentration, which could serve as potential biomarkers. Differentially expressed proteins were identified in a discovery group with severe COPD (FEV1 <45% predicted; n = 10). Subjects with normal lung function matched for age, sex, ethnicity and smoking history served as controls (n = 10). Pooled plasma from each group was exhaustively immunodepleted of abundant proteins, d separated by 1-D gel electrophoresis and extensively fractionated prior to LC-tandem mass spectroscopy (GeLC-MS). Thirty one differentially expressed proteins were identified in the discovery group including markers of lung defense against oxidant stress, alveolar macrophage activation, and lung tissue injury and repair. Four of the 31 proteins (i.e., GRP78, soluble CD163, IL1AP and MSPT9) were measured in a separate verification group of 80 subjects with varying COPD severity by immunoassay. All 4 were significantly altered in COPD and 2 (GRP78 and soluble CD163) correlated with both FEV1 and the extent of emphysema. In-depth, plasma proteomic analysis identified a group of novel, differentially expressed, low abundance proteins that reflect known pathogenic mechanisms and the severity of lung remodeling in COPD. These proteins may also prove useful as COPD biomarkers.

  16. Abundance analysis of Am binaries and search for tidally driven abundance anomalies - III. HD116657, HD138213, HD155375, HD159560, HD196544 and HD204188

    CERN Document Server

    Stateva, I; Budaj, J

    2011-01-01

    We continue here the systematic abundance analysis of a sample of Am binaries in order to search for possible abundance anomalies driven by tidal interaction in these binary systems. New CCD observations in two spectral regions (6400-6500, 6660-6760 AA) of HD116657, HD138213, HD155375, HD159560, HD196544 and HD204188 were obtained. Synthetic spectrum analysis was carried out and basic stellar properties, effective temperatures, gravities, projected rotational velocities, masses, ages and abundances of several elements were determined. We conclude that all six stars are Am stars. These stars were put into the context of other Am binaries with 10 < Porb < 200 days and their abundance anomalies discussed in the context of possible tidal effects. There is clear anti-correlation of the Am peculiarities with v sin i. However, there seems to be also a correlation with the eccentricity and may be with the orbital period. The dependence on the temperature, age, mass, and microturbulence was studied as well. The ...

  17. Analysis of roles and groups in blogosphere

    OpenAIRE

    Gliwa, Bogdan; Zygmunt, Anna; Koźlak, Jarosław

    2013-01-01

    In the paper different roles of users in social media, taking into consideration their strength of influence and different degrees of cooperativeness, are introduced. Such identified roles are used for the analysis of characteristics of groups of strongly connected entities. The different classes of groups, considering the distribution of roles of users belonging to them, are presented and discussed.

  18. High-resolution abundance analysis of very metal-poor r-I stars

    CERN Document Server

    Siqueira-Mello, C; Barbuy, B; Spite, M; Spite, F; Beers, T C; Caffau, E; Bonifacio, P; Cayrel, R; François, P; Schatz, H; Wanajo, S

    2014-01-01

    Moderately r-process-enriched stars (r-I) are at least four times as common as those that are greatly enriched in r-process elements (r-II), and the abundances in their atmospheres are important tools for obtaining a better understanding of the nucleosynthesis processes responsible for the origin of the elements beyond the iron peak. The main aim of this work is to derive abundances for a sample of seven metal-poor stars with classified as r-I stars, to understand the role of these stars for constraining the astrophysical nucleosynthesis event(s) that is(are) responsible for the production of the r-process, and to investigate whether they differ, in any significant way, from the r-II stars. We carried out a detailed abundance analysis based on high-resolution spectra obtained with the VLT/UVES spectrograph. The OSMARCS LTE 1D model atmosphere grid was employed, along with the spectrum synthesis code Turbospectrum. We have derived abundances of light elements Li, C, and N, alpha-elements, odd-Z elements, iron-...

  19. Detailed atmospheric abundance analysis of the optical counterpart of the IR source IRAS 16559-2957

    CERN Document Server

    Molina, R E

    2013-01-01

    We have undertaken a detailed abundance analysis of the optical counterpart of the IR source IRAS16559-2957 with the aim of confirming its possible post-AGB nature. The star shows solar metallicity and our investigation of a large number of elements including CNO and 12C/13C suggests that this object has experienced the first dredge-up and it is likely still at RGB stage.

  20. Group 3 late embryogenesis abundant proteins from embryos of Artemia franciscana: structural properties and protective abilities during desiccation.

    Science.gov (United States)

    Boswell, Leaf C; Menze, Michael A; Hand, Steven C

    2014-01-01

    Group 3 late embryogenesis abundant (LEA) proteins are highly hydrophilic, and their expression is associated with desiccation tolerance in both plants and animals. Here we show that two LEA proteins from embryos of Artemia franciscana, AfrLEA2 and AfrLEA3m, are intrinsically disordered in solution but upon desiccation gain secondary structure, as measured by circular dichroism. Trifluoroethanol and sodium dodecyl sulfate are both shown to induce α-helical structure in AfrLEA2 and AfrLEA3m. Bioinformatic predictions of secondary-structure content for both proteins correspond most closely to conformations measured in the dry state. Because some LEA proteins afford protection to desiccation-sensitive proteins during drying and subsequent rehydration, we tested for this capacity in AfrLEA2 and AfrLEA3m. The protective capacities vary, depending on the target enzyme. For the cytoplasmic enzyme lactate dehydrogenase, neither AfrLEA2 nor AfrLEA3m, with or without trehalose present, was able to afford protection better than that provided by bovine serum albumin (BSA) under the same conditions. However, for another cytoplasmic enzyme, phosphofructokinase, both AfrLEA2 and AfrLEA3m in the presence of trehalose were able to afford protection far greater than that provided by BSA with trehalose. Finally, for the mitochondrial enzyme citrate synthase, 400-μg/mL AfrLEA3m without trehalose provided significantly more protection than the same concentration of either AfrLEA2 or BSA.

  1. Platinum-group element abundance and distribution in chromite deposits of the Acoje Block, Zambales Ophiolite Complex, Philippines

    Science.gov (United States)

    Bacuta, G.C.; Kay, R.W.; Gibbs, A.K.; Lipin, B.R.

    1990-01-01

    Platinum-group elements (PGE) occur in ore-grade concentration in some of the chromite deposits related to the ultramafic section of the Acoje Block of the Zambales Ophiolite Complex. The deposits are of three types: Type 1 - associated with cumulate peridotites at the base of the crust; Type 2 - in dunite pods from the top 1 km of mantle harzburgite; and Type 3 - like Type 2, but in deeper levels of the harzburgite. Most of the deposites have chromite compositions that are high in Cr with Cr/(Cr + Al) (expressed as chromium index, Cr#) > 0.6; high-Al (Cr# Pd, thought to be characteristic of PGE-barren deposits) and positive slope (Ir Platinum and Pd occur as alloy inclusions (and possibly as solid solution) in interstitial Ni-Cu sulfides and as tellurobismuthides in serpentine and altered sulfides. Variability of PGE distribution may be explained by alteration, crystal fractionation or partial melting processes. Alteration and metamorphism were ruled out, because PGE contents do not correlate with degree of serpentinization or the abundance and type (hydroxyl versus non-hydroxyl) of silicate inclusions in chromite. Preliminary Os isotopic data do not support crustal contamination as a source of the PGEs in the Acoje deposits. The anomalous PGE concentrations in Type 1 high-Cr chromite deposits are attributed to two stages of enrichment: an early enrichment of their mantle source from previous melting events and a later stage of sulfide segregation accompanying chromite crystallization. High-Al chromite deposits which crystallized from basalts derived from relatively low degrees of melting owe their low PGE content to partitioning of PGEs in sulfides and alloys that remain in the mantle. High-Cr deposits crystallized from melts that were previously enriched with PGEs during early melting events of their mantle source; Pt and Pd ore concentrations (ppm levels) are attained by segregation of magmatic sulfides. The Acoje deposits indicate that ophiolites are a

  2. The abundances of hydrocarbon functional groups in the interstellar medium inferred from laboratory spectra of hydrogenated and methylated polycyclic aromatic hydrocarbons

    CERN Document Server

    Steglich, Mathias; Huisken, Friedrich; Friedrich, Manfred; Plass, Winfried; Räder, Hans-Joachim; Müllen, Klaus; Henning, Thomas

    2013-01-01

    Infrared (IR) absorption spectra of individual polycyclic aromatic hydrocarbons (PAHs) containing methyl (-CH3), methylene (>CH2), or diamond-like *CH groups and IR spectra of mixtures of methylated and hydrogenated PAHs prepared by gas phase condensation were measured at room temperature (as grains in pellets) and at low temperature (isolated in Ne matrices). In addition, the PAH blends were subjected to an in-depth molecular structure analysis by means of high-performance liquid chromatography (HPLC), nuclear magnetic resonance (NMR) spectroscopy, and matrix-assisted laser desorption/ionization time-of-flight mass spectrometry (MALDI-TOF). Supported by calculations at the density functional theory (DFT) level, the laboratory results were applied to analyze in detail the aliphatic absorption complex of the diffuse interstellar medium (ISM) at 3.4 mu-m and to determine the abundances of hydrocarbon functional groups. Assuming that the PAHs are mainly locked in grains, aliphatic CHx groups (x = 1,2,3) would co...

  3. The chemical abundance analysis of normal early A- and late B-type stars

    CERN Document Server

    Fossati, L; Bagnulo, S; Alecian, E; Grunhut, J; Kochukhov, O; Wade, G

    2009-01-01

    Modern spectroscopy of early-type stars often aims at studying complex physical phenomena. Comparatively less attention is paid to identifying and studying the "normal" A- and B-type stars and testing how the basic atomic parameters and standard spectral analysis allow one to fit the observations. We wish to stablish whether the chemical composition of the solar photosphere can be regarded as a reference for early A- and late B-type stars. We have obtained optical high-resolution, high signal-to-noise ratio spectra of three slowly rotating early-type stars (HD 145788, 21 Peg and pi Cet) that show no obvious sign of chemical peculiarity, and performed a very accurate LTE abundance analysis of up to 38 ions of 26 elements (for 21 Peg), using a vast amount of spectral lines visible in the spectral region covered by our spectra. We provide an exhaustive description of the abundance characteristics of the three analysed stars with a critical review of the line parameters used to derive the abundances. We compiled ...

  4. Spectral Properties of Cool Stars: Extended Abundance Analysis of 1626 Planet Search Stars

    CERN Document Server

    Brewer, John M; Valenti, Jeff A; Piskunov, Nikolai

    2016-01-01

    We present a catalog of uniformly determined stellar properties and abundances for 1626 F, G, and K stars using an automated spectral synthesis modeling procedure. All stars were observed using the HIRES spectrograph at Keck Observatory. Our procedure used a single line list to fit model spectra to observations of all stars to determine effective temperature, surface gravity, metallicity, projected rotational velocity, and the abundances of 15 elements (C, N, O, Na, Mg, Al, Si, Ca, Ti, V, Cr, Mn, Fe, Ni, & Y). Sixty percent of the sample had Hipparcos parallaxes and V-band photometry which we combined with the spectroscopic results to obtain mass, radius, and luminosity. Additionally, we used the luminosity, effective temperature, metallicity and alpha-element enhancement to interpolate in the Yonsei-Yale isochrones to derive mass, radius, gravity, and age ranges for those stars. Finally, we determined new relations between effective temperature and macroturbulence for dwarfs and subgiants. Our analysis a...

  5. Experimental and theoretical oscillator strengths of Mg i for accurate abundance analysis

    Science.gov (United States)

    Pehlivan Rhodin, A.; Hartman, H.; Nilsson, H.; Jönsson, P.

    2017-02-01

    Context. With the aid of stellar abundance analysis, it is possible to study the galactic formation and evolution. Magnesium is an important element to trace the α-element evolution in our Galaxy. For chemical abundance analysis, such as magnesium abundance, accurate and complete atomic data are essential. Inaccurate atomic data lead to uncertain abundances and prevent discrimination between different evolution models. Aims: We study the spectrum of neutral magnesium from laboratory measurements and theoretical calculations. Our aim is to improve the oscillator strengths (f-values) of Mg i lines and to create a complete set of accurate atomic data, particularly for the near-IR region. Methods: We derived oscillator strengths by combining the experimental branching fractions with radiative lifetimes reported in the literature and computed in this work. A hollow cathode discharge lamp was used to produce free atoms in the plasma and a Fourier transform spectrometer recorded the intensity-calibrated high-resolution spectra. In addition, we performed theoretical calculations using the multiconfiguration Hartree-Fock program ATSP2K. Results: This project provides a set of experimental and theoretical oscillator strengths. We derived 34 experimental oscillator strengths. Except from the Mg i optical triplet lines (3p 3P°0,1,2-4s 3S1), these oscillator strengths are measured for the first time. The theoretical oscillator strengths are in very good agreement with the experimental data and complement the missing transitions of the experimental data up to n = 7 from even and odd parity terms. We present an evaluated set of oscillator strengths, gf, with uncertainties as small as 5%. The new values of the Mg i optical triplet line (3p 3P°0,1,2-4s 3S1) oscillator strength values are 0.08 dex larger than the previous measurements.

  6. Dimensional analysis and group theory in astrophysics

    CERN Document Server

    Kurth, Rudolf

    2013-01-01

    Dimensional Analysis and Group Theory in Astrophysics describes how dimensional analysis, refined by mathematical regularity hypotheses, can be applied to purely qualitative physical assumptions. The book focuses on the continuous spectral of the stars and the mass-luminosity relationship. The text discusses the technique of dimensional analysis, covering both relativistic phenomena and the stellar systems. The book also explains the fundamental conclusion of dimensional analysis, wherein the unknown functions shall be given certain specified forms. The Wien and Stefan-Boltzmann Laws can be si

  7. Richness and abundance of the cardini group of Drosophila (Diptera, Drosophilidae) in the Caatinga and Atlantic Forest biomes in northeastern Brazil.

    Science.gov (United States)

    Rohde, Cláudia; Silva, Diva Maria Izabel O; Oliveira, Geórgia F; Monteiro, Liv S; Montes, Martín A; Garcia, Ana Cristina L

    2014-12-01

    Brazil has a high diversity of flies of the genus Drosophila, and part of this richness is represented by the cardini group. We analyzed the fluctuations in the richness and abundance of this group, in environments that had never previously been studied in the northeastern region of Brazil. Among the 28,204 drosophilids sampled, 1,294 belonged to the cardini group and were represented by D. polymorpha, D. cardini, D. neocardini and D. cardinoides. Occurrences of D. neocardini and D. cardinoides were registered for the first time in the Caatinga. In this biome, D. cardini stood out as having the highest abundance, and D. polymorpha was not observed. In the coastal Atlantic Forest, D. cardini was not registered, but D. polymorpha was found in all the localities investigated. Mangrove swamps were the environment with the lowest abundance and richness of the cardini group. The High-altitude Forest presented the highest richness of this group. We suggest that the high abundance of D. polymorpha in the High-altitude Forest and in the coastal Atlantic Forest may be a reflection of the historical relationship between these two environments.

  8. The Control Group and Meta-Analysis

    Directory of Open Access Journals (Sweden)

    John E Hunter

    2014-09-01

    Full Text Available Social scientists use a mixture of different methodologies, which creates problems for researchers attempting to review the cumulative results of all studies.  Standard practice for review studies using meta-analysis is to adjust the findings of all studies that use control groups and to include studies not having control groups without adjustment for extraneous effects, or to not use studies that lack a control group, which could produce an erroneous result.  Our study develops a novel meta-analytic procedure that combines the evidence on control group change with evidence on change from the intervention, making it possible to adjust for the effects of extraneous factors in all studies and bridges the gap between control group studies and other types of studies. DOI: 10.2458/azu_jmmss.v5i1.18302

  9. Abundance analysis of the supergiant stars HD 80057 and HD 80404 based on their UVES Spectra

    CERN Document Server

    Tanrıverdi, Taner

    2015-01-01

    This study presents elemental abundances of the early A-type supergiant HD 80057 and the late A-type supergiant HD80404. High resolution and high signal-to-noise ratio spectra published by the UVES Paranal Observatory Project (Bagnulo et al., 2003) were analysed to compute their elemental abundances using ATLAS9 (Kurucz, 1993, 2005; Sbordone et al., 2004). In our analysis we assumed local thermodynamic equilibrium. The atmospheric parameters of HD 80057 used in this study are from Firnstein & Przybilla (2012), and that of HD80404 are derived from spectral energy distribution, ionization equilibria of Cr I/II and Fe I/II, and the fits to the wings of Balmer lines and Paschen lines as Teff = 7700 +/- 150 K and log g=1.60 +/- 0.15 (in cgs). The microturbulent velocities of HD 80057 and HD 80404 have been determined as 4.3 +/- 0.1 and 2.2 +/- 0.7 km s^-1 . The rotational velocities are 15 +/-1 and 7 +/- 2 km s^-1 and their macroturbulence velocities are 24 +/-2 and 2+/-1 km s^-1 . We have given the abundances...

  10. Molecular cloning and characterization of the late embryogenesis abundant group 4 (EgLEA4 gene from oil palm (Elaeis guineensis Jacq

    Directory of Open Access Journals (Sweden)

    Watcharasuda Hualkasin

    2013-06-01

    Full Text Available The Late-Embryogenesis Abundant group 4 (LEA4 genes is a group of genes that have been reported to be involved in stress and hormone responses. The completed LEA4 cDNA sequence was first obtained from a set of EST sequences of oil palm (Elaeis guineensis Jacq, named as EgLEA4. The open reading frame is 486 bp in length, encoding a deduced amino acid sequence of 161 residues with a molecular weight of 16.5 kDa and a pI value of about 8.0. Five amino acid motif patterns were found in the EgLEA4 (II, I, III, IV and V and each had a close identity to similar LEA4 patterns of soybean (64%.Comparison of the nucleotide sequences of the cDNA and the genomic DNA demonstrated that the EgLEA4 gene is composed of 2 exons and 1 intron. The 52 untranslated region shows a putative promoter sequence involved in the transcription process, drought stress and hormone responsive elements. RT-PCR analysis showed that the EgLEA4 gene was only expressed in mesocarp, during the late stages of fruit development. It also had a higher expression in induced drought conditions indicating that the EgLEA4 protein may be involved in plant adaptation and stress (drought responsive pathway.

  11. An approach to remove albumin for the proteomic analysis of low abundance biomarkers in human serum.

    Science.gov (United States)

    Ahmed, Nuzhat; Barker, Gillian; Oliva, Karen; Garfin, David; Talmadge, Kenneth; Georgiou, Harry; Quinn, Michael; Rice, Greg

    2003-10-01

    Proteomic technologies are being used to discover and identify disease-associated biomarkers. The application of these technologies in the search for potential diagnostic/prognostic biomarkers in the serum of patients has been limited by the presence of highly abundant albumin and immunoglobulins that constitute approximately 60-97% of the total serum proteins. The purpose of the study was to evaluate whether treatment of human serum with Affi-Gel Blue alone or in combination with Protein A (Aurum serum protein mini kit, Bio-Rad) before two-dimensional gel electrophoresis (2-DE) analysis removed high abundance proteins to allow the visualization of low abundant proteins. Serum samples were treated with either Affi-Gel Blue or Aurum kit and then subjected to 2-DE using 11 cm, pH 4-7 isoelectric focussing strips for the first dimension and 10% sodium dodecyl sulfate-polyacrylamide gel electrophoresis for second dimension. Protein spots were visualized using a fluorescent protein dye (SYPRO Ruby, Bio-Rad). Comparison between treatment methods showed significant removal of albumin by both Affi-Gel Blue and Aurum kit and considerable differences in the protein profile of the gels after each treatment. Direct comparison between treatments revealed twenty-eight protein spots unique to Affi-Gel Blue while only two spots were unique after Aurum kit treatment. Unique spots in Affi-Gel Blue and Aurum kit treated serum were not visualized in untreated serum. Sixteen hours of Affi-Gel Blue treatment resulted in enhanced visualization of fifty-three protein spots by two-fold, thirty-one by five-fold, twelve by ten-fold and six by twenty-fold. In parallel after Aurum kit treatment two-, five-, ten- and twenty-fold enhancements of thirty, thirteen, eight and five protein spots, respectively, were observed. The pattern of increased visualization of protein spots with both treatment methods was similar. In conclusion, treatment of serum samples with Affi-Gel Blue or Aurum kit before

  12. Environmental controls on microbial abundance and activity on the greenland ice sheet: a multivariate analysis approach.

    Science.gov (United States)

    Stibal, Marek; Telling, Jon; Cook, Joe; Mak, Ka Man; Hodson, Andy; Anesio, Alexandre M

    2012-01-01

    Microbes in supraglacial ecosystems have been proposed to be significant contributors to regional and possibly global carbon cycling, and quantifying the biogeochemical cycling of carbon in glacial ecosystems is of great significance for global carbon flow estimations. Here we present data on microbial abundance and productivity, collected along a transect across the ablation zone of the Greenland ice sheet (GrIS) in summer 2010. We analyse the relationships between the physical, chemical and biological variables using multivariate statistical analysis. Concentrations of debris-bound nutrients increased with distance from the ice sheet margin, as did both cell numbers and activity rates before reaching a peak (photosynthesis) or a plateau (respiration, abundance) between 10 and 20 km from the margin. The results of productivity measurements suggest an overall net autotrophy on the GrIS and support the proposed role of ice sheet ecosystems in carbon cycling as regional sinks of CO(2) and places of production of organic matter that can be a potential source of nutrients for downstream ecosystems. Principal component analysis based on chemical and biological data revealed three clusters of sites, corresponding to three 'glacier ecological zones', confirmed by a redundancy analysis (RDA) using physical data as predictors. RDA using data from the largest 'bare ice zone' showed that glacier surface slope, a proxy for melt water flow, accounted for most of the variation in the data. Variation in the chemical data was fully explainable by the determined physical variables. Abundance of phototrophic microbes and their proportion in the community were identified as significant controls of the carbon cycling-related microbial processes.

  13. Process Analysis of the CV Group's Operation

    CERN Document Server

    Wilhelmsson, M

    2000-01-01

    This report will give an explanation of the internal reorganization that has been done because of the necessity to optimize operation in the cooling and ventilation group. The basic structure for the group was defined at the end of 1998. We understood then that change was needed to accommodate the increased workload due to the LHC project. In addition, we face a relatively large turnover of personnel (retirements and some recruitment) with related integration issues to consider. We would also like to implement new approaches in the management of both operations and maintenance. After some running-in problems during the first half of 1999, we realized that much more could be gained with the analysis and the definition and documenting of each single function and generic activity within the group. The authors will explain how this analysis was carried out and give some feedback of the outcome, so far.

  14. Harmonic analysis on exponential solvable Lie groups

    CERN Document Server

    Fujiwara, Hidenori

    2015-01-01

    This book is the first one that brings together recent results on the harmonic analysis of exponential solvable Lie groups. There still are many interesting open problems, and the book contributes to the future progress of this research field. As well, various related topics are presented to motivate young researchers. The orbit method invented by Kirillov is applied to study basic problems in the analysis on exponential solvable Lie groups. This method tells us that the unitary dual of these groups is realized as the space of their coadjoint orbits. This fact is established using the Mackey theory for induced representations, and that mechanism is explained first. One of the fundamental problems in the representation theory is the irreducible decomposition of induced or restricted representations. Therefore, these decompositions are studied in detail before proceeding to various related problems: the multiplicity formula, Plancherel formulas, intertwining operators, Frobenius reciprocity, and associated alge...

  15. Abundance of lanthanoids in rock salts determined by neutron activation analysis

    Energy Technology Data Exchange (ETDEWEB)

    Honda, Teruyuki; Nozaki, Tetsuya [Musashi Inst. of Tech., Kawasaki, Kanagawa (Japan). Atomic Energy Research Lab.; Yui, Mitsuaki; Kikawada, Yoshikazu; Oi, Takao

    1998-06-01

    Contents of lanthanoids (Ln`s) of rock salts have been measured by the neutron activation analysis. Original salt samples were treated in advance of neutron irradiation so that Ln`s were enriched and amounts of interfering nuclides were reduced. The contents of Ln`s were at ppt-sub ppb levels and were comparable with or slightly lower than those of solar salts. The Ln abundance patterns of the salts were those with relative depletion in the heavy Ln`s, thus having negative slopes. It was indicated that, when salt deposit was formed, Ln`s were taken up by anhydrite more preferentially than by halite. (author)

  16. Differential chemical abundance analysis of a 47 Tuc AGB star with respect to Arcturus

    CERN Document Server

    Worley, C C; Freeman, K C; Boer, E C Wylie-de

    2009-01-01

    This study resolves a discrepancy in the abundance of Zr in the 47 Tucanae asymptotic giant branch star Lee 2525. This star was observed using the echelle spectrograph on the 2.3 m telescope at Siding Spring Observatory. The analysis was undertaken by calibrating Lee 2525 with respect to the standard giant star Arcturus. This work emphasises the importance of using a standard star with stellar parameters comparable to the star under analysis rather than a calibration with respect to the Sun (Koch & McWilliam 2008). Systematic errors in the analysis process are then minimised due to the similarity in atmospheric structure between the standard and programme stars. The abundances derived for Lee 2525 were found to be in general agreement with the Brown & Wallerstein (1992) values except for Zr. In this study Zr has a similar enhancement ([Zr/Fe] = +0.51 dex) to another light s-process element, Y ([Y/Fe] = +0.53 dex), which reflects current theory regarding the enrichment of s-process elements by nuclear ...

  17. Spectroscopic survey of γ Doradus stars - I. Comprehensive atmospheric parameters and abundance analysis of γ Doradus stars

    Science.gov (United States)

    Kahraman Aliçavuş, F.; Niemczura, E.; De Cat, P.; Soydugan, E.; Kołaczkowski, Z.; Ostrowski, J.; Telting, J. H.; Uytterhoeven, K.; Poretti, E.; Rainer, M.; Suárez, J. C.; Mantegazza, L.; Kilmartin, P.; Pollard, K. R.

    2016-05-01

    We present a spectroscopic survey of known and candidate γ Doradus stars. The high-resolution, high signal-to-noise spectra of 52 objects were collected by five different spectrographs. The spectral classification, atmospheric parameters (Teff, log g, ξ), vsin i and chemical composition of the stars were derived. The stellar spectral and luminosity classes were found between G0-A7 and IV-V, respectively. The initial values for Teff and log g were determined from the photometric indices and spectral energy distribution. Those parameters were improved by the analysis of hydrogen lines. The final values of Teff, log g and ξ were derived from the iron lines analysis. The Teff values were found between 6000 K and 7900 K, while log g values range from 3.8 to 4.5 dex. Chemical abundances and vsin i values were derived by the spectrum synthesis method. The vsin i values were found between 5 and 240 km s-1. The chemical abundance pattern of γ Doradus stars were compared with the pattern of non-pulsating stars. It turned out that there is no significant difference in abundance patterns between these two groups. Additionally, the relations between the atmospheric parameters and the pulsation quantities were checked. A strong correlation between the vsin i and the pulsation periods of γ Doradus variables was obtained. The accurate positions of the analysed stars in the Hertzsprung-Russell diagram have been shown. Most of our objects are located inside or close to the blue edge of the theoretical instability strip of γ Doradus.

  18. Chemical Abundances and Kinematics in Globular Clusters and Local Group Dwarf Galaxies and Their Implications for Formation Theories of the Galactic Halo

    CERN Document Server

    Geisler, Doug; Smith, Verne V; Casetti-Dinescu, Dana I

    2007-01-01

    We review Galactic halo formation theories and supporting evidence, in particular kinematics and detailed chemical abundances of stars in some relevant globular clusters as well as Local Group dwarf galaxies. Outer halo red HB clusters tend to have large eccentricities and inhabit the area populated by dwarf spheroidal stars, favoring an extraGalactic origin. Old globulars show the full range of eccentricities, while younger ones seem to have preferentially high eccentricities, again hinting at their extraGalactic origin. We compare detailed abundances of a variety of elements between the halo and all dwarf galaxies studied to date, including both dwarf spheroidals and irregulars. The salient feature is that halo abundances are essentially unique. In particular, the general alpha vs. [Fe/H] pattern of 12 of the 13 galaxies studied are similar to each other and very different from the Milky Way. Sagittarius appears to be the only possible exception. It appears very unlikely that a significant fraction of the m...

  19. MGA: A gamma-ray spectrum analysis code for determining plutonium isotopic abundances. Volume 3, FORTRAN listing of the GA code

    Energy Technology Data Exchange (ETDEWEB)

    Gunnink, R

    1991-09-01

    Nondestructive measurements of x-ray and gamma-ray emissions can be used to determine the abundances of various actinides in a sample. Volume 1 of this report describes the methods and algorithms we have developed to determine the relative isotopic abundances of actinides in a sample, by analyzing gamma-ray spectra obtained using germanium detector systems. Volume 2 is a guide to using the MGA (Multiple Group Analysis) computer program we have written to perform plutonium isotopic analyses. This report contains a listing of the FORTRAN instructions of the code.

  20. Spatiotemporal Patterns and Dynamics of Species Richness and Abundance of Woody Plant Functional Groups in a Tropical Forest Landscape of Hainan Island,South China

    Institute of Scientific and Technical Information of China (English)

    Zhi-Dong Zhang; Run-Guo Zang; Yao-Dong Qi

    2008-01-01

    Tropical forests are among the most species-diverse ecosystems on Earth. Their structures and ecological functions are complex to understand. Functional group is defined as a group of species that play similar roles in an ecosystem. The functional group approach has been regarded as an effective way of linking the compositions of complex ecosystems with their ecological functions. To understand the variation of functional groups in species-rich ecosystems after disturbance, the present study investigated the spatial pattern and temporal dynamics of woody plants in a typically fragmented natural forest landscape of Hainan Island in South China. The study area was classified into eight landscape types based on vegetation type, disturbance manner and the time of recovery. The woody plant species were aggregated into seven functional groups based on the growth form, successional status and plant size. The results gained from the present study showed that all functional groups, except for the emergent and canopy tree species, were present in all eight landscape types. Each landscape type had different numbers of dominant functional groups. There are similar species richness and stem abundance structure among functional groups between mid-successional clear cut lowland rainforest and old growth tropical coniferous forest. This similarity exists in selective logged lowland rainforest and old-growth lowland rainforest, as well as among landscape types of montane rainforest. The functional groups with the same successional status had similar patterns of species richness and stem abundance ratios among different landscape types. The variation patterns of functional groups along the successional stages in terms of species richness and stem abundance among the tropical lowland rainforest landscape types were more similar to each other than those in the tropical montane reinforest landscape types. This study provides further support for the competition-colonization tradeoff and

  1. HE1327-2326, an unevolved star with [Fe/H]<-5.0. I. A Comprehensive Abundance Analysis

    CERN Document Server

    Aoki, W; Christlieb, N; Norris, J E; Beers, T C; Minezaki, T; Barklem, P S; Honda, S; Takada-Hidai, M; Asplund, M; Ryan, S G; Tsangarides, S A; Eriksson, K; Steinhauer, A; Deliyannis, C P; Nomoto, K; Fujimoto, M Y; Ando, H; Yoshii, Y; Kajino, T

    2006-01-01

    We present the elemental abundances of HE1327-2326, the most iron-deficient star known, determined from a comprehensive analysis of spectra obtained with the Subaru Telescope High Dispersion Spectrograph.

  2. Scalable group level probabilistic sparse factor analysis

    DEFF Research Database (Denmark)

    Hinrich, Jesper Løve; Nielsen, Søren Føns Vind; Riis, Nicolai Andre Brogaard

    2017-01-01

    Many data-driven approaches exist to extract neural representations of functional magnetic resonance imaging (fMRI) data, but most of them lack a proper probabilistic formulation. We propose a scalable group level probabilistic sparse factor analysis (psFA) allowing spatially sparse maps, component...... pruning using automatic relevance determination (ARD) and subject specific heteroscedastic spatial noise modeling. For task-based and resting state fMRI, we show that the sparsity constraint gives rise to components similar to those obtained by group independent component analysis. The noise modeling...... shows that noise is reduced in areas typically associated with activation by the experimental design. The psFA model identifies sparse components and the probabilistic setting provides a natural way to handle parameter uncertainties. The variational Bayesian framework easily extends to more complex...

  3. Meta-analysis: abundance, behavior, and hydraulic energy shape biotic effects on sediment transport in streams.

    Science.gov (United States)

    Albertson, L K; Allen, D C

    2015-05-01

    An increasing number of studies have emphasized the need to bridge the disciplines of ecology and geomorphology. A large number of case studies show that organisms can affect erosion, but a comprehensive understanding of biological impacts on sediment transport conditions is still lacking. We use meta-analysis to synthesize published data to quantify the effects of the abundance, body size, and behavior of organisms on erosion in streams. We also explore the influence of current velocity, discharge, and sediment grain size on the strength of biotic effects on erosion. We found that species that both increase erosion (destabilizers) and decrease erosion (stabilizers) can alter incipient sediment motion, sediment suspension, and sediment deposition above control conditions in which the organisms were not present. When abundance was directly manipulated, these biotic effects were consistently stronger in the higher abundance treatment, increasing effect sizes by 66%. Per capita effect size and per capita biomass were also consistently positively correlated. Fish and crustaceans were the most studied organisms, but aquatic insects increased the effect size by 550 x compared to other types of organisms after accounting for biomass. In streams with lower discharge and smaller grain sizes, we consistently found stronger biotic effects. Taken collectively, these findings provide synthetic evidence that biology can affect physical processes in streams, and these effects can be mediated by hydraulic energy. We suggest that future studies focus on understudied organisms, such as biofilms, conducting experiments under realistic field conditions, and developing hypotheses for the effect of biology on erosion and velocity currents in the context of restoration to better understand the forces that mediate physical disturbances in stream ecosystems.

  4. Abundance quantification by independent component analysis of hyperspectral imagery for oil spill coverage calculation

    Science.gov (United States)

    Han, Zhongzhi; Wan, Jianhua; Zhang, Jie; Zhang, Hande

    2016-08-01

    The estimation of oil spill coverage is an important part of monitoring of oil spills at sea. The spatial resolution of images collected by airborne hyper-spectral remote sensing limits both the detection of oil spills and the accuracy of estimates of their size. We consider at-sea oil spills with zonal distribution in this paper and improve the traditional independent component analysis algorithm. For each independent component we added two constraint conditions: non-negativity and constant sum. We use priority weighting by higher-order statistics, and then the spectral angle match method to overcome the order nondeterminacy. By these steps, endmembers can be extracted and abundance quantified simultaneously. To examine the coverage of a real oil spill and correct our estimate, a simulation experiment and a real experiment were designed using the algorithm described above. The result indicated that, for the simulation data, the abundance estimation error is 2.52% and minimum root mean square error of the reconstructed image is 0.030 6. We estimated the oil spill rate and area based on eight hyper-spectral remote sensing images collected by an airborne survey of Shandong Changdao in 2011. The total oil spill area was 0.224 km2, and the oil spill rate was 22.89%. The method we demonstrate in this paper can be used for the automatic monitoring of oil spill coverage rates. It also allows the accurate estimation of the oil spill area.

  5. Smaller desert dust cooling effect estimated from analysis of dust size and abundance

    Science.gov (United States)

    Kok, Jasper F.; Ridley, David A.; Zhou, Qing; Miller, Ron L.; Zhao, Chun; Heald, Colette L.; Ward, Daniel S.; Albani, Samuel; Haustein, Karsten

    2017-03-01

    Desert dust aerosols affect Earth's global energy balance through direct interactions with radiation, and through indirect interactions with clouds and ecosystems. But the magnitudes of these effects are so uncertain that it remains unclear whether atmospheric dust has a net warming or cooling effect on global climate. Consequently, it is still uncertain whether large changes in atmospheric dust loading over the past century have slowed or accelerated anthropogenic climate change, or what the effects of potential future changes in dust loading will be. Here we present an analysis of the size and abundance of dust aerosols to constrain the direct radiative effect of dust. Using observational data on dust abundance, in situ measurements of dust optical properties and size distribution, and climate and atmospheric chemical transport model simulations of dust lifetime, we find that the dust found in the atmosphere is substantially coarser than represented in current global climate models. As coarse dust warms the climate, the global dust direct radiative effect is likely to be less cooling than the ~-0.4 W m-2 estimated by models in a current global aerosol model ensemble. Instead, we constrain the dust direct radiative effect to a range between -0.48 and +0.20 W m-2, which includes the possibility that dust causes a net warming of the planet.

  6. Analysis of the abundance of abandoned tanks in Hambantota District, Sri Lanka using GIS techniques

    Directory of Open Access Journals (Sweden)

    I.P. Senanayake

    2012-12-01

    Full Text Available Around two thirds of the area in Sri Lanka is covered by the dry zone, which receives less than 1750 mm average annual rainfall, but not equally distributed over the land. Due to rainfall variations, dry zone of Sri Lanka faced periodic drought conditions in the past. On the basis of surface water availability, Hambantota District appears to be a highly affected area. Tanks have been constructed in order to harvest rainwater to overcome this problem. But, there are many abandoned tanks in Hambantota, which decrease the effectiveness and efficiency of water harvesting. In order to minimize the number of abandoned tanks, an analysis is carried out to find the cause for the abundance of abandoned tanks in the area. Integrating GIS techniques with the relevant data such as rainfall, topographic contours, spot heights, land use, temperature, geology, etc. gives an accurate and updated database, which helps to analyze the reason for the abundance of the abandoned tanks in the area, and hence facilitate the increase of efficiency and effectiveness of rainwater harvesting through a proper water management system.

  7. CN and CH Abundance Analysis in a Sample of Eight Galactic Globular Clusters

    Science.gov (United States)

    Smolinski, Jason P.; Lee, Y.; Beers, T. C.; Martell, S. L.; An, D.; Sivarani, T.

    2011-01-01

    Galactic globular clusters exhibit star-to-star variations in their light element abundances that are not predicted by formation and evolution models involving single stellar generations. Recently it has been suggested that internal pollution from early supernovae and AGB winds may have played important roles in forming a second generation of enriched stars. We present updated results of a CN and CH abundance analysis of stars from the base to the tip of the red giant branch, and in some cases down onto the main sequence, for eight globular clusters with available photometric and spectroscopic data from SDSS-I and SDSS-II/SEGUE. These results include a discussion of the radial distribution of CN enrichment and how this may impact the current paradigm. Funding for SDSS-I and SDSS-II has been provided by the Alfred P. Sloan Foundation, the Participating Institutions, the National Science Foundation, the U.S. Department of Energy, the National Aeronautics and Space Administration, the Japanese Monbukagakusho, the Max Planck Society, and the Higher Education Funding Council for England. The SDSS Web Site is http://www.sdss.org/. This work was supported in part by grants PHY 02-16783 and PHY 08-22648: Physics Frontiers Center/Joint Institute for Nuclear Astrophysics (JINA), awarded by the U.S. National Science Foundation.

  8. Analysis of Carbohydrate and Fatty Acid Marker Abundance in Ricin Toxin Preparations for Forensic Information

    Energy Technology Data Exchange (ETDEWEB)

    Colburn, Heather A.; Wunschel, David S.; Kreuzer-Martin, Helen W.; Moran, James J.; Antolick, Kathryn C.; Melville, Angela M.

    2010-07-15

    One challenge in the forensic analysis of ricin samples is determining the method and extent of sample preparation. Ricin purification from the source castor seeds is essentially a protein purification through removal of the non-protein fractions of the seed. Two major, non-protein constituents in the seed are the castor oil and carbohydrates. Ricinoleic acid is a relatively unique fatty acid in nature and is the most abundant component of castor oil, which comprises roughly half the seed weight. The carbohydrate component comprises roughly half of the remaining “mash” left after oil and hull removal. We used derivatization of carbohydrate and fatty acid markers followed by identification and quantification using gas chromatography/mass spectrometry (GC/MS) to assess compositional changes in ricin samples purified by different methods. The loss of ricinoleic acid indicated steps for oil removal had occurred. Changes to the carbohydrate content of the sample were also observed following protein precipitation. The differential loss of arabinose relative to mannose indicated removal of the major carbohydrate fraction of the seed and enrichment of the protein content. Taken together, these changes in fatty acid and carbohydrate abundance are indicative of the preparation method used for each sample.

  9. An Abundance Analysis of the Primary Star of the Peculiar Eclipsing Binary ɛ Aurigae out of the Eclipsing Phase

    Science.gov (United States)

    Sadakane, Kozo; Kambe, Eiji; Sato, Bun'ei; Honda, Satoshi; Hashimoto, Osamu

    2010-12-01

    A detailed abundance analysis of the primary star of ɛ Aur before an eclipse was carried out using a very high signal-to-noise ratio optical-region spectrum. An A7 Iab supergiant HD 81471, presumably a member of the Vela OB1 association, was used as a reference. We obtained atmospheric parameters (Teff, log g, and ξt) to be (8025 K, 1.0 and 10 km s-1) and (8050 K, 1.0 and 7 km s-1) for ɛ Aur and HD 81471, respectively. The abundances of Mg, Si, S, Ca, Sc, Ti, Cr, and Fe were very close to the solar abundances in both stars. Light elements C and O were under-abundant, while N and Na were over-abundant in both stars, after correcting for non-LTE effects. Definite under-abundances of Sr were detected in both stars. Slight, but definite, over-abundances were found in ɛ Aur for the s-process elements Y, Zr, and Ba, when compared with the results of HD 81471. Enhancements in the abundances of N, Na, and s-process elements might indicate the occurences of thermal dredge-up and the s-process nucleosynthesis in ɛ Aur during the past evolution.

  10. Internet cancer support groups: a feminist analysis.

    Science.gov (United States)

    Im, Eun-Ok; Chee, Wonshik; Tsai, Hsiu-Min; Lin, Li-Chen; Cheng, Ching-Yu

    2005-01-01

    Internet Cancer Support Groups (ICSGs) are an emerging form of support group on Internet specifically for cancer patients. Previous studies have indicated the effectiveness of ICSGs as a research setting or a data-collection method. Yet recent studies have also indicated that ICSGs tend to serve highly educated, high-income White males who tend to be at an early stage of cancer. In this article, a total of 317 general ICSGs and 229 ethnic-specific ICSGs searched through Google.com, Yahoo.com, Msn.com, AOL.com, and ACOR.org are analyzed from a feminist perspective. The written records of group discussions and written memos by the research staff members were also analyzed using content analysis. The idea categories that emerged about these groups include (a) authenticity issues; (b) ethnicity and gender issues; (c) intersubjectivity issues; and (d) potential ethical issues. The findings suggest that (a) researchers adopt multiple recruitment strategies through various Internet sites and/or real settings; (b) researchers raise their own awareness of the potential influences of the health-related resources provided by ICSGs and regularly update their knowledge related to the federal and state standards and/or policies related to ICSGs; and (c) researchers consider adopting a quota-sampling method.

  11. VizieR Online Data Catalog: Extended abundance analysis of cool stars (Brewer+, 2016)

    Science.gov (United States)

    Brewer, J. M.; Fischer, D. A.; Valenti, J. A.; Piskunov, N.

    2016-10-01

    The stellar spectra in this study were all collected using the HIRES spectrograph (R~70000) on the Keck I telescope as part of one or more radial-velocity planet-search programs under the collaborative umbrella known as the California Planet Survey (CPS; Howard+ 2010ApJ...721.1467H). In addition to stellar spectra, our data also include 20 spectra of four different asteroids (4 Vesta, 1036 Ganymed, 3 Juno, and 10 Hygiea) from five epochs throughout the 10-year period covered by the observations in our sample. These spectra provided disk-integrated solar spectra and were obtained to help calibrate our analysis by providing small zero-point offsets for solar parameters and abundances. (4 data files).

  12. ANALYSIS OF RICIN TOXIN PREPARATIONS FOR CARBOHYDRATE AND FATTY ACID ABUNDANCE AND ISOTOPE RATIO INFORMATION

    Energy Technology Data Exchange (ETDEWEB)

    Wunschel, David S.; Kreuzer-Martin, Helen W.; Antolick, Kathryn C.; Colburn, Heather A.; Moran, James J.; Melville, Angela M.

    2009-12-01

    This report describes method development and preliminary evaluation for analyzing castor samples for signatures of purifying ricin. Ricin purification from the source castor seeds is essentially a problem of protein purification using common biochemical methods. Indications of protein purification will likely manifest themselves as removal of the non-protein fractions of the seed. Two major, non-protein, types of biochemical constituents in the seed are the castor oil and various carbohydrates. The oil comprises roughly half the seed weight while the carbohydrate component comprises roughly half of the remaining “mash” left after oil and hull removal. Different castor oil and carbohydrate components can serve as indicators of specific toxin processing steps. Ricinoleic acid is a relatively unique fatty acid in nature and is the most abundant component of castor oil. The loss of ricinoleic acid indicates a step to remove oil from the seeds. The relative amounts of carbohydrates and carbohydrate-like compounds, including arabinose, xylose, myo-inositol fucose, rhamnose, glucosamine and mannose detected in the sample can also indicate specific processing steps. For instance, the differential loss of arabinose relative to mannose and N-acetyl glucosamine indicates enrichment for the protein fraction of the seed using protein precipitation. The methods developed in this project center on fatty acid and carbohydrate extraction from castor samples followed by derivatization to permit analysis by gas chromatography-mass spectrometry (GC-MS). Method descriptions herein include: the source and preparation of castor materials used for method evaluation, the equipment and description of procedure required for chemical derivatization, and the instrument parameters used in the analysis. Two types of derivatization methods describe analysis of carbohydrates and one procedure for analysis of fatty acids. Two types of GC-MS analysis is included in the method development, one

  13. Compact Groups analysis using weak gravitational lensing

    Science.gov (United States)

    Chalela, Martín; Johana Gonzalez, Elizabeth; Garcia Lambas, Diego; Foëx, Gael

    2017-01-01

    We present a weak lensing analysis of a sample of SDSS Compact Groups (CGs). Using the measured radial density contrast profile, we derive the average masses under the assumption of spherical symmetry, obtaining a velocity dispersion for the Singular Isothermal Spherical model, σV = 270 ± 40 km s-1, and for the NFW model, R_{200}=0.53± 0.10 h_{70}^{-1}Mpc. We test three different definitions of CGs centres to identify which best traces the true dark matter halo centre, concluding that a luminosity weighted centre is the most suitable choice. We also study the lensing signal dependence on CGs physical radius, group surface brightness, and morphological mixing. We find that groups with more concentrated galaxy members show steeper mass profiles and larger velocity dispersions. We argue that both, a possible lower fraction of interloper and a true steeper profile, could be playing a role in this effect. Straightforward velocity dispersion estimates from member spectroscopy yields σV ≈ 230 km s-1 in agreement with our lensing results.

  14. Chemical abundance analysis of symbiotic giants. RW Hya, SY Mus, BX Mon, and AE Ara

    CERN Document Server

    Galan, Cezary; Hinkle, Kenneth H; Schmidt, Miroslaw R; Gromadzki, Mariusz

    2014-01-01

    Symbiotic stars are the long period, binary systems of strongly interacting stars at the final stages of evolution which can be useful tool to understand the chemical evolution of the Galaxy and the formation of stellar populations. Knowledge of the chemical composition of the symbiotic giants is essential to advancing our understanding of these issues but unfortunately reliably determinations exist only in a few cases. We perform a program for detailed chemical composition analysis in over 30 symbiotic giants, based on the high resolution, near-IR spectra, obtained with Phoenix/Gemini South spectrometer. The methods of the standard LTE analysis is used to obtain photospheric abundances of CNO and elements around iron peak. Here we present results obtained for four objects: RW Hya, SY Mus, BX Mon, and AE Ara. Our analysis revealed a significantly sub-solar metallicity (Me/H ~ -0.75) for RW Hya, a slightly sub-solar metallicities (Me/H ~ 0.2-0.3) in BX Mon and AE Ara, and a near-solar metallicity in SY Mus. 12...

  15. Abundance and distribution of major groups of diazotrophic cyanobacteria and their potential contribution to N₂ fixation in the tropical Atlantic Ocean.

    Science.gov (United States)

    Goebel, Nicole L; Turk, Kendra A; Achilles, Katherine M; Paerl, Ryan; Hewson, Ian; Morrison, Amanda E; Montoya, Joseph P; Edwards, Christopher A; Zehr, Jonathan P

    2010-12-01

    The abundances of six N₂-fixing cyanobacterial phylotypes were profiled at 22 stations across the tropical Atlantic Ocean during June 2006, and used to model the contribution of the diazotrophs to N₂ fixation. Diazotroph abundances were measured by targeting the nifH gene of Trichodesmium, unicellular groups A, B, C (UCYN-A, UCYN-B and UCYN-C), and diatom-cyanobiont symbioses Hemiaulus-Richelia, Rhizosolenia-Richelia and Chaetoceros-Calothrix. West to east gradients in temperature, salinity and nutrients [NO₃⁻ + NO₂⁻, PO₄³⁻, Si(OH)₄] showed the influence of the Amazon River plume and its effect on the distributions of the diazotrophs. Trichodesmium accounted for more than 93% of all nifH genes detected, dominated the warmer waters of the western Atlantic, and was the only diazotroph detected at the equatorial upwelling station. UCYN-A was the next most abundant (> 5% of all nifH genes) and dominated the cooler waters of the eastern Atlantic near the Cape Verde Islands. UCYN-C was found at a single depth (200 m) of high salinity and low temperature and nutrients, whereas UCYN-B cells were widespread but in very low abundance (6.1 × 10¹ ± 4.6 × 10² gene copies l⁻¹). The diatom-cyanobionts were observed primarily in the western Atlantic within or near the high Si(OH)₄ input of the Amazon River plume. Overall, highest diazotroph abundances were observed at the surface and declined with depth, except for some subsurface peaks in Trichodesmium, UCYN-B and UCYN-A. Modelled contributions of Trichodesmium, UCYN-B and UCYN-A to total N₂ fixation suggested that Trichodesmium had the largest input, except for the potential of UCYN-A at the Cape Verde Islands.

  16. Evaluation of strontium isotope abundance ratios in combination with multi-elemental analysis as a possible tool to study the geographical origin of ciders

    Energy Technology Data Exchange (ETDEWEB)

    Garcia-Ruiz, Silvia [Department of Physical and Analytical Chemistry, University of Oviedo, Julian Claveria 8, 33006 Oviedo (Spain); Moldovan, Mariella [Department of Physical and Analytical Chemistry, University of Oviedo, Julian Claveria 8, 33006 Oviedo (Spain); Fortunato, Giuseppino [Swiss Federal Laboratories for Materials Testing and Research EMPA, 9014 St. Gallen (Switzerland); Wunderli, Samuel [Swiss Federal Laboratories for Materials Testing and Research EMPA, 9014 St. Gallen (Switzerland); Garcia Alonso, J. Ignacio [Department of Physical and Analytical Chemistry, University of Oviedo, Julian Claveria 8, 33006 Oviedo (Spain)]. E-mail: jiga@uniovi.es

    2007-05-02

    In order to evaluate alternative analytical methodologies to study the geographical origin of ciders, both multi-elemental analysis and Sr isotope abundance ratios in combination with multivariate statistical analysis were estimated in 67 samples from England, Switzerland, France and two Spanish regions (Asturias and the Basque Country). A methodology for the precise and accurate determination of the {sup 87}Sr/{sup 86}Sr isotope abundance ratio in ciders by multicollector inductively coupled plasma mass spectrometry (MC-ICP-MS) was developed. Major elements (Na, K, Ca and Mg) were measured by ICP-AES and minor and trace elements (Li, Be, B, Al, Sc, Ti, V, Cr, Mn, Fe, Co, Ni, Cu, Zn, Ga, As, Se, Rb, Sr, Y, Mo, Cd, Sn, Sb, Cs, Ba, La, Ce, W, Tl, Pb, Bi, Th and U) were measured by ICP-MS using a collision cell instrument operated in multitune mode. An analysis of variance (ANOVA test) indicated that group means for B, Cr, Fe, Ni, Cu, Se, Cd, Cs, Ce, W, Pb, Bi and U did not show any significant differences at the 95% confidence level, so these elements were rejected for further statistical analysis. Another group of elements (Li, Be, Sc, Co, Ga, Y, Sn, Sb, La, Tl, Th) was removed from the data set because concentrations were close to the limits of detection for many samples. Therefore, the remaining elements (Na, Mg, Al, K, Ca, Ti, V, Mn, Zn, As, Rb, Sr, Mo, Ba) together with {sup 87}Sr/{sup 86}Sr isotope abundance ratio were considered for principal component analysis (PCA) and linear discriminant analysis (LDA). Finally, LDA was able to classify correctly 100% of cider samples coming from different Spanish regions, France, England and Switzerland when considering Na, Mg, Al, K, Ca, Ti, V, Mn, Zn, As, Rb, Sr, Mo, Ba and {sup 87}Sr/{sup 86}Sr isotope abundance ratio as original variables.

  17. Detailed abundance analysis of a metal-poor giant in the Galactic Center

    CERN Document Server

    Ryde, N; Rich, R M; Thorsbro, B; Schultheis, M; Origlia, L; Chatzopoulos, S

    2016-01-01

    We report the first results from our program to examine the metallicity distribution of the Milky Way nuclear star cluster connected to SgrA*, with the goal of inferring the star formation and enrichment history of this system, as well as its connection and relationship with the central 100 pc of the bulge/bar system. We present the first high resolution (R~24,000), detailed abundance analysis of a K=10.2 metal-poor, alpha-enhanced red giant projected at 1.5 pc from the Galactic Center, using NIRSPEC on Keck II. A careful analysis of the dynamics and color of the star locates it at about 26 pc line-of-sight distance in front of the nuclear cluster. It probably belongs to one of the nuclear components (cluster or disk), not to the bar-bulge or classical disk. A detailed spectroscopic synthesis, using a new linelist in the K band, finds [Fe/H]~-1.0 and [alpha/Fe]~+0.4, consistent with stars of similar metallicity in the bulge. As known giants with comparable [Fe/H] and alpha enhancement are old, we conclude tha...

  18. Measurement of isotope abundance variations in nature by gravimetric spiking isotope dilution analysis (GS-IDA).

    Science.gov (United States)

    Chew, Gina; Walczyk, Thomas

    2013-04-02

    Subtle variations in the isotopic composition of elements carry unique information about physical and chemical processes in nature and are now exploited widely in diverse areas of research. Reliable measurement of natural isotope abundance variations is among the biggest challenges in inorganic mass spectrometry as they are highly sensitive to methodological bias. For decades, double spiking of the sample with a mix of two stable isotopes has been considered the reference technique for measuring such variations both by multicollector-inductively coupled plasma mass spectrometry (MC-ICPMS) and multicollector-thermal ionization mass spectrometry (MC-TIMS). However, this technique can only be applied to elements having at least four stable isotopes. Here we present a novel approach that requires measurement of three isotope signals only and which is more robust than the conventional double spiking technique. This became possible by gravimetric mixing of the sample with an isotopic spike in different proportions and by applying principles of isotope dilution for data analysis (GS-IDA). The potential and principle use of the technique is demonstrated for Mg in human urine using MC-TIMS for isotopic analysis. Mg is an element inaccessible to double spiking methods as it consists of three stable isotopes only and shows great potential for metabolically induced isotope effects waiting to be explored.

  19. Rapid determination of bacterial abundance, biovolume, morphology, and growth by neural network-based image analysis

    Science.gov (United States)

    Blackburn; Hagstrom; Wikner; Cuadros-Hansson; Bjornsen

    1998-09-01

    Annual bacterial plankton dynamics at several depths and locations in the Baltic Sea were studied by image analysis. Individual bacteria were classified by using an artificial neural network which also effectively identified nonbacterial objects. Cell counts and frequencies of dividing cells were determined, and the data obtained agreed well with visual observations and previously published values. Cell volumes were measured accurately by comparison with bead standards. The survey included 690 images from a total of 138 samples. Each image contained approximately 200 bacteria. The images were analyzed automatically at a rate of 100 images per h. Bacterial abundance exhibited coherent patterns with time and depth, and there were distinct subsurface peaks in the summer months. Four distinct morphological classes were resolved by the image analyzer, and the dynamics of each could be visualized. The bacterial growth rates estimated from frequencies of dividing cells were different from the bacterial growth rates estimated by the thymidine incorporation method. With minor modifications, the image analysis technique described here can be used to analyze other planktonic classes.

  20. Exclusively visual analysis of classroom group interactions

    Science.gov (United States)

    Tucker, Laura; Scherr, Rachel E.; Zickler, Todd; Mazur, Eric

    2016-12-01

    Large-scale audiovisual data that measure group learning are time consuming to collect and analyze. As an initial step towards scaling qualitative classroom observation, we qualitatively coded classroom video using an established coding scheme with and without its audio cues. We find that interrater reliability is as high when using visual data only—without audio—as when using both visual and audio data to code. Also, interrater reliability is high when comparing use of visual and audio data to visual-only data. We see a small bias to code interactions as group discussion when visual and audio data are used compared with video-only data. This work establishes that meaningful educational observation can be made through visual information alone. Further, it suggests that after initial work to create a coding scheme and validate it in each environment, computer-automated visual coding could drastically increase the breadth of qualitative studies and allow for meaningful educational analysis on a far greater scale.

  1. 41 CFR 60-2.12 - Job group analysis.

    Science.gov (United States)

    2010-07-01

    ... 41 Public Contracts and Property Management 1 2010-07-01 2010-07-01 true Job group analysis. 60-2... group analysis. (a) Purpose: A job group analysis is a method of combining job titles within the... employed. (b) In the job group analysis, jobs at the establishment with similar content, wage rates,...

  2. A new strategy for integrating abundant oxygen functional groups into carbon felt electrode for vanadium redox flow batteries

    Science.gov (United States)

    Kim, Ki Jae; Lee, Seung-Wook; Yim, Taeeun; Kim, Jae-Geun; Choi, Jang Wook; Kim, Jung Ho; Park, Min-Sik; Kim, Young-Jun

    2014-11-01

    The effects of surface treatment combining corona discharge and hydrogen peroxide (H2O2) on the electrochemical performance of carbon felt electrodes for vanadium redox flow batteries (VRFBs) have been thoroughly investigated. A high concentration of oxygen functional groups has been successfully introduced onto the surface of the carbon felt electrodes by a specially designed surface treatment, which is mainly responsible for improving the energy efficiency of VRFBs. In addition, the wettability of the carbon felt electrodes also can be significantly improved. The energy efficiency of the VRFB cell employing the surface modified carbon felt electrodes is improved by 7% at high current density (148 mA cm-2). Such improvement is attributed to the faster charge transfer and better wettability allowed by surface-active oxygen functional groups. Moreover, this method is much more competitive than other surface treatments in terms of processing time, production costs, and electrochemical performance.

  3. Group Counseling with United States Racial Minority Groups: A 25-Year Content Analysis

    Science.gov (United States)

    Stark-Rose, Rose M.; Livingston-Sacin, Tina M.; Merchant, Niloufer; Finley, Amanda C.

    2012-01-01

    A 25-year content analysis was conducted of published group work articles that focused on 5 racial groups (African American, Asian American/Pacific Islander, Latino/a, Native American, and Intercultural group). Articles were included if they described an intervention or conceptual model with 1 of the racial groups. The analysis revealed 15 content…

  4. Group Counseling with United States Racial Minority Groups: A 25-Year Content Analysis

    Science.gov (United States)

    Stark-Rose, Rose M.; Livingston-Sacin, Tina M.; Merchant, Niloufer; Finley, Amanda C.

    2012-01-01

    A 25-year content analysis was conducted of published group work articles that focused on 5 racial groups (African American, Asian American/Pacific Islander, Latino/a, Native American, and Intercultural group). Articles were included if they described an intervention or conceptual model with 1 of the racial groups. The analysis revealed 15 content…

  5. Mutual Group Hypnosis: A Social Interaction Analysis.

    Science.gov (United States)

    Sanders, Shirley

    Mutual Group Hypnosis is discussed in terms of its similarity to group dynamics in general and in terms of its similarity to a social interaction program (Role Modeling) designed to foster the expression of warmth and acceptance among group members. Hypnosis also fosters a regression to prelogical thought processes in the service of the ego. Group…

  6. Mutual Group Hypnosis: A Social Interaction Analysis.

    Science.gov (United States)

    Sanders, Shirley

    Mutual Group Hypnosis is discussed in terms of its similarity to group dynamics in general and in terms of its similarity to a social interaction program (Role Modeling) designed to foster the expression of warmth and acceptance among group members. Hypnosis also fosters a regression to prelogical thought processes in the service of the ego. Group…

  7. Three applications of functional analysis with group dynamic cognitive behavioral group therapy.

    Science.gov (United States)

    Scharwächter, Peter

    2008-01-01

    Case illustrations from group dynamic cognitive behavioral group therapy are presented to demonstrate three applications of functional analysis and the resulting cognitive behavioral interventions. The principles of group dynamic cognitive behavioral group therapy are explained. A functional analysis is applied first to the problem behavior of an individual group member. A clinical case illustrates how the group members help to change this individual group member's behavior from a learning theory perspective. Next, the circular interactional problem behavior between two group members is reduced to the individual functional analysis of each of the two member's problem behaviors. It is then illustrated how the two group member's problem behaviors, as well as feedback from others, contribute toward helping to change each others behavior. The paper concludes that functional analysis and ensuing behavioral interventions can be also applied to group as a whole behavior.

  8. Expert group formation using facility location analysis

    NARCIS (Netherlands)

    Neshati, Mahmood; Beigy, Hamid; Hiemstra, Djoerd

    2014-01-01

    In this paper, we propose an optimization framework to retrieve an optimal group of experts to perform a multi-aspect task. While a diverse set of skills are needed to perform a multi-aspect task, the group of assigned experts should be able to collectively cover all these required skills. We consid

  9. Analysis of transference in Gestalt group psychotherapy.

    Science.gov (United States)

    Frew, J E

    1990-04-01

    In Gestalt therapy, transference is viewed as a contact boundary disturbance which impairs the patient's ability to accurately perceive the present therapy situation. The boundary disturbances in Gestalt therapy most closely related to the analytic notion of transference are projection, introjection, and confluence. In Gestalt group psychotherapy, group members interfere with the process of need identification and satisfaction by distorting their contact with each other through projecting, introjecting, and being confluent. The Gestalt group therapist uses interventions directed to individuals and to the group to increase participants' awareness of these boundary disturbances and of the present contact opportunities available to them when these disturbances are resolved. In formulating interventions, the leader is mindful of the function of boundary disturbances to the group-as-a-whole as well as to individuals.

  10. Non-LTE analysis of copper abundances for the two distinct halo populations in the solar neighborhood

    CERN Document Server

    Yan, H L; Nissen, P E; Zhao, G

    2016-01-01

    Two distinct halo populations were found in the solar neighborhood by a series of works. They can be clearly separated by [alpha\\Fe] and several other elemental abundance ratios including [Cu/Fe]. Very recently, a non-local thermodynamic equilibrium (non-LTE) study revealed that relatively large departures exist between LTE and non-LTE results in copper abundance analysis. We aim to derive the copper abundances for the stars from the sample of Nissen et al (2010) with both LTE and non-LTE calculations. Based on our results, we study the non-LTE effects of copper and investigate whether the high-alpha population can still be distinguished from the low-alpha population in the non-LTE [Cu/Fe] results. Our differential abundance ratios are derived from the high-resolution spectra collected from VLT/UVES and NOT/FIES spectrographs. Applying the MAFAGS opacity sampling atmospheric models and spectrum synthesis method, we derive the non-LTE copper abundances based on the new atomic model with current atomic data obt...

  11. CHEMICAL ABUNDANCE ANALYSIS OF A NEUTRON-CAPTURE ENHANCED RED GIANT IN THE BULGE PLAUT FIELD

    Energy Technology Data Exchange (ETDEWEB)

    Johnson, Christian I.; Rich, R. Michael [Department of Physics and Astronomy, UCLA, 430 Portola Plaza, Box 951547, Los Angeles, CA 90095-1547 (United States); McWilliam, Andrew, E-mail: cijohnson@astro.ucla.edu, E-mail: rmr@astro.ucla.edu, E-mail: cjohnson@cfa.harvard.edu, E-mail: andy@obs.carnegiescience.edu [Observatories of the Carnegie Institution of Washington, Pasadena, CA 91101 (United States)

    2013-09-20

    We present chemical abundances for 27 elements ranging from oxygen to erbium in the metal-poor ([Fe/H] = –1.67) bulge red giant branch star 2MASS 18174532-3353235. The results are based on equivalent width and spectrum synthesis analyses of a high-resolution (R ∼ 30, 000) spectrum obtained with the Magellan-MIKE spectrograph. While the light (Z ∼< 30) element abundance patterns match those of similar metallicity bulge and halo stars, the strongly enhanced heavy element abundances are more similar to 'r-II' halo stars (e.g., CS 22892-052) typically found at [Fe/H] ∼< – 2.5. We find that the heaviest elements (Z ≥ 56) closely follow the scaled-solar r-process abundance pattern. We do not find evidence supporting significant s-process contributions; however, the intermediate mass elements (e.g., Y and Zr) appear to have been produced through a different process than the heaviest elements. The light and heavy element abundance patterns of 2MASS 18174532-3353235 are in good agreement with the more metal-poor r-process enhanced stars CS 22892-052 and BD +17{sup o}3248. 2MASS 18174532-3353235 also shares many chemical characteristics with the similar metallicity but comparatively α-poor Ursa Minor dwarf galaxy giant COS 82. Interestingly, the Mo and Ru abundances of 2MASS 18174532-3353235 are also strongly enhanced and follow a similar trend recently found to be common in moderately metal-poor main-sequence turn-off halo stars.

  12. Overexpression Analysis of emv2 gene coding for Late Embryogenesis Abundant Protein from Vigna radiata (Wilczek

    Directory of Open Access Journals (Sweden)

    Rajesh S.

    2008-10-01

    Full Text Available Late embryogenesis abundant (LEA proteins are speculated to protect against water stress deficit in plants. An over expression system for mungbean late embryogenesis abundant protein, emv2 was constructed in a pET29a vector, designated pET-emv2 which is responsible for higher expression under the transcriptional/translational control of T7/lac promoter incorporated in the Escherichia coli BL21 (DE3.Induction protocol was optimized for pET recombinants harboring the target gene. Overexpressed EMV2 protein was purified to homogeneity and the protein profile monitored by SDS-PAGE.

  13. Improvement of DGGE analysis by modifications of PCR protocols for analysis of microbial community members with low abundance.

    Science.gov (United States)

    Wang, Yong-Feng; Zhang, Fang-Qiu; Gu, Ji-Dong

    2014-06-01

    Denaturing gradient gel electrophoresis (DGGE) is a powerful technique to reveal the community structures and composition of microorganisms in complex natural environments and samples. However, positive and reproducible polymerase chain reaction (PCR) products, which are difficult to acquire for some specific samples due to low abundance of the target microorganisms, significantly impair the effective applications of DGGE. Thus, nested PCR is often introduced to generate positive PCR products from the complex samples, but one problem is also introduced: The total number of thermocycling in nested PCR is usually unacceptably high, which results in skewed community structures by generation of random or mismatched PCR products on the DGGE gel, and this was demonstrated in this study. Furthermore, nested PCR could not resolve the uneven representative issue with PCR products of complex samples with unequal richness of microbial population. In order to solve the two problems in nested PCR, the general protocol was modified and improved in this study. Firstly, a general PCR procedure was used to amplify the target genes with the PCR primers without any guanine cytosine (GC) clamp, and then, the resultant PCR products were purified and diluted to 0.01 μg ml(-1). Subsequently, the diluted PCR products were utilized as templates to amplify again with the same PCR primers with the GC clamp for 17 cycles, and the products were finally subjected to DGGE analysis. We demonstrated that this is a much more reliable approach to obtain a high quality DGGE profile with high reproducibility. Thus, we recommend the adoption of this improved protocol in analyzing microorganisms of low abundance in complex samples when applying the DGGE fingerprinting technique to avoid biased results.

  14. Abundance analysis of red clump stars in the old, inner disc, open cluster NGC 4337: a twin of NGC 752?

    CERN Document Server

    Carraro, Giovanni; Villanova, Sandro

    2014-01-01

    Open star clusters older than ~ 1 Gyr are rare in the inner Galactic disc. Still, they are objects that hold crucial information for probing the chemical evolution of these regions of the Milky Way. We aim at increasing the number of old open clusters in the inner disc for which high-resolution metal abundances are available. Here we report on NGC 4337, which was recently discovered to be an old, inner disc open cluster. We present the very first high-resolution spectroscopy of seven clump stars that are all cluster members. We performed a detailed abundance analysis for them. We find that NGC 4337 is marginally more metal-rich than the Sun, with [Fe/H]=+0.12$\\pm$0.05. The abundance ratios of $\\alpha$-elements are generally solar. At odds with recent studies on intermediate-age and old open clusters in the Galactic disc, Ba is under-abundant in NGC 4337 compared with the Sun. Our analysis of the iron-peak elements (Cr and Ni) does not reveal anything anomalous. Based on these results, we estimate the cluster ...

  15. Where intersubjectivity and group analysis meet.

    Science.gov (United States)

    Aviv, Alex

    2010-01-01

    Intersubjectivity can be defined as the union or contact of the subjectivities (Gordon, 1991). In therapy, it refers to the interaction between therapist and patient, and the processes that affect and are affected by that interaction. The essence of these interactions in the setting of group therapy, the obstacles that may arise because of them, and ways in which the therapist may identify and facilitate intersubjectivity in order to promote discourse that will enrich the sessions are discussed. I briefly touch upon earlier theories of psychoanalysis, demonstrating how changes in approaches influenced perceptions of what occurs in therapy. The unique place of intersubjectivity within the group analytic setting is emphasized using several vignettes from sessions I have led as a group analyst candidate to better illustrate how intersubjectivity can be observed in vivo.

  16. Precision Chemical Abundance Measurements

    DEFF Research Database (Denmark)

    Yong, David; Grundahl, Frank; Meléndez, Jorge;

    2012-01-01

    This talk covers preliminary work in which we apply a strictly differential line-by-line chemical abundance analysis to high quality UVES spectra of the globular cluster NGC 6752. We achieve extremely high precision in the measurement of relative abundance ratios. Our results indicate that the ob......This talk covers preliminary work in which we apply a strictly differential line-by-line chemical abundance analysis to high quality UVES spectra of the globular cluster NGC 6752. We achieve extremely high precision in the measurement of relative abundance ratios. Our results indicate...... that the observed abundance dispersion exceeds the measurement uncertainties and that many pairs of elements show significant correlations when plotting [X1/H] vs. [X2/H]. Our tentative conclusions are that either NGC 6752 is not chemically homogeneous at the ~=0.03 dex level or the abundance variations...

  17. Exclusively Visual Analysis of Classroom Group Interactions

    Science.gov (United States)

    Tucker, Laura; Scherr, Rachel E.; Zickler, Todd; Mazur, Eric

    2016-01-01

    Large-scale audiovisual data that measure group learning are time consuming to collect and analyze. As an initial step towards scaling qualitative classroom observation, we qualitatively coded classroom video using an established coding scheme with and without its audio cues. We find that interrater reliability is as high when using visual data…

  18. Millimeter-scale variations of stable isotope abundances in carbonates from banded iron-formations in the Hamersley Group of Western Australia

    Science.gov (United States)

    Baur, M. E.; Hayes, J. M.; Studley, S. A.; Walter, M. R.

    1985-01-01

    Several diamond drill cores from formations within the Hamersley Group of Western Australia have been studied for evidence of short-range variations in the isotopic compositions of the carbonates. For a set of 32 adjacent microbands analyzed in a specimen from the Marra Mamba Iron Formation, carbon isotope compositions of individual microbands ranged from -2.8 to -19.8 per mil compared to PDB and oxygen isotope compositions ranged from 10.2 to 20.8 per mil compared to SMOW. A pattern of alternating abundances was present, with the average isotopic contrasts between adjacent microbands being 3.0 per mil for carbon and 3.1 per mil for oxygen. Similar results were obtained for a suite of 34 microbands (in four groups) from the Bruno's Band unit of the Mount Sylvia Formation. Difficulties were experienced in preparing samples of single microbands from the Dales Gorge Member of the Brockman Iron Formation, but overall isotopic compositions were in good agreement with values reported by previous authors. Chemical analyses showed that isotopically light carbon and oxygen were correlated with increased concentrations of iron. The preservation of these millimeter-scale variations in isotopic abundances is interpreted as inconsistent with a metamorphic origin for the isotopically light carbon in the BIF carbonates. A biological origin is favored for the correlated variations in 13C and Fe, and it is suggested that the 13C-depleted carbonates may derive either from fermentative metabolism or from anaerobic respiration. A model is presented in which these processes occur near the sediment-water interface and are coupled with an initial oxidative precipitation of the iron.

  19. The effect of heavy metal concentration and soil pH on the abundance of selected microbial groups within ArcelorMittal Poland steelworks in Cracow.

    Science.gov (United States)

    Lenart, Anna; Wolny-Koładka, Katarzyna

    2013-01-01

    The present study aimed to identify the effect of heavy metal concentration and soil pH on the abundance of the selected soil microorganisms within ArcelorMittal Poland steelworks, Cracow. The analysis included 20 soil samples, where the concentration of Fe, Zn, Cd, Pb, Ni, Cu, Mn, Cr and soil pH were evaluated together with the number of mesophilic bacteria, fungi, Actinomycetes and Azotobacter spp. In the majority of samples soil pH was alkaline. The limits of heavy metals exceeded in eight samples and in one sample, the concentration of Zn exceeded 31-fold. Chromium was the element which most significantly limited the number of bacteria and Actinomycetes.

  20. Homogeneous abundance analysis of dwarf, subgiant and giant FGK stars with and without giant planets

    CERN Document Server

    da Silva, R; Rocha-Pinto, H J

    2015-01-01

    We have analyzed high-resolution and high signal-to-noise ratio optical spectra of nearby FGK stars with and without detected giant planets in order to homogeneously measure their photospheric parameters, mass, age, and the abundances of volatile (C, N, and O) and refractory (Na, Mg, Si, Ca, Ti, V, Mn, Fe, Ni, Cu, and Ba) elements. Our sample contains 309 stars from the solar neighborhood (up to the distance of 100 pc), out of which 140 are dwarfs, 29 are subgiants, and 140 are giants. The photospheric parameters are derived from the equivalent widths of Fe I and Fe II lines. Masses and ages come from the interpolation in evolutionary tracks and isochrones on the HR diagram. The abundance determination is based on the equivalent widths of selected atomic lines of the refractory elements and on the spectral synthesis of C_2, CN, C I, O I, and Na I features. We apply a set of statistical methods to analyze the abundances derived for the three subsamples. Our results show that: i) giant stars systematically exhi...

  1. Culicoides monitoring in Belgium in 2011: analysis of spatiotemporal abundance, species diversity and Schmallenberg virus detection.

    Science.gov (United States)

    DE Regge, N; DE Deken, R; Fassotte, C; Losson, B; Deblauwe, I; Madder, M; Vantieghem, P; Tomme, M; Smeets, F; Cay, A B

    2015-09-01

    In 2011, Culicoides (Diptera: Ceratopogonidae) were collected at 16 locations covering four regions of Belgium with Onderstepoort Veterinary Institute (OVI) traps and at two locations with Rothamsted suction traps (RSTs). Quantification of the collections and morphological identification showed important variations in abundance and species diversity between individual collection sites, even for sites located in the same region. However, consistently higher numbers of Culicoides midges were collected at some sites compared with others. When species abundance and diversity were analysed at regional level, between-site variation disappeared. Overall, species belonging to the subgenus Avaritia together with Culicoides pulicaris (subgenus Culicoides) were the most abundant, accounting for 80% and 96% of all midges collected with RSTs and OVI traps, respectively. Culicoides were present during most of the year, with Culicoides obsoletus complex midges found from 9 February until 27 December. Real-time reverse-transcription polymerase chain reaction screening for Schmallenberg virus in the heads of collected midges resulted in the first detection of the virus in August 2011 and identified C. obsoletus complex, Culicoides chiopterus and Culicoides dewulfi midges as putative vector species. At Libramont in the south of Belgium, no positive pools were identified.

  2. Likelihood Analysis of the Local Group Acceleration

    CERN Document Server

    Schmoldt, I M; Teodoro, L; Efstathiou, G P; Frenk, C S; Keeble, O; Maddox, S J; Oliver, S; Rowan-Robinson, M; Saunders, W J; Sutherland, W; Tadros, H; White, S D M

    1999-01-01

    We compute the acceleration on the Local Group using 11206 IRAS galaxies from the recently completed all-sky PSCz redshift survey. Measuring the acceleration vector in redshift space generates systematic uncertainties due to the redshift space distortions in the density field. We therefore assign galaxies to their real space positions by adopting a non-parametric model for the velocity field that solely relies on the linear gravitational instability and linear biasing hypotheses. Remaining systematic contributions to the measured acceleration vector are corrected for by using PSCz mock catalogues from N-body experiments. The resulting acceleration vector points approx. 15 degrees away from the CMB dipole apex, with a remarkable alignment between small and large scale contributions. A considerable fraction of the measured acceleration is generated within 40 h-1 Mpc with a non-negligible contribution from scales between 90 and 140 h-1 Mpc after which the acceleration amplitude seems to have converged. The local...

  3. Development of renormalization group analysis of turbulence

    Science.gov (United States)

    Smith, L. M.

    1990-01-01

    The renormalization group (RG) procedure for nonlinear, dissipative systems is now quite standard, and its applications to the problem of hydrodynamic turbulence are becoming well known. In summary, the RG method isolates self similar behavior and provides a systematic procedure to describe scale invariant dynamics in terms of large scale variables only. The parameterization of the small scales in a self consistent manner has important implications for sub-grid modeling. This paper develops the homogeneous, isotropic turbulence and addresses the meaning and consequence of epsilon-expansion. The theory is then extended to include a weak mean flow and application of the RG method to a sequence of models is shown to converge to the Navier-Stokes equations.

  4. Development of renormalization group analysis of turbulence

    Science.gov (United States)

    Smith, L. M.

    1990-01-01

    The renormalization group (RG) procedure for nonlinear, dissipative systems is now quite standard, and its applications to the problem of hydrodynamic turbulence are becoming well known. In summary, the RG method isolates self similar behavior and provides a systematic procedure to describe scale invariant dynamics in terms of large scale variables only. The parameterization of the small scales in a self consistent manner has important implications for sub-grid modeling. This paper develops the homogeneous, isotropic turbulence and addresses the meaning and consequence of epsilon-expansion. The theory is then extended to include a weak mean flow and application of the RG method to a sequence of models is shown to converge to the Navier-Stokes equations.

  5. Mathematical Analysis of Piaget's Grouping Concept. Papy's Minicomputer as a Grouping

    Science.gov (United States)

    Steiner, H. G.

    1974-01-01

    Through a mathematical analysis, Piaget's grouping concept can be formally interpreted as being a hybrid between the mathematical concepts of a group and a lattice. Some relevant pedagogical models are presented. Activities with Cuisenaire Rods, Dienes Blocks, and Papy's Minicomputer are shown to take place in groupings. (LS)

  6. Chemical abundance analysis of symbiotic giants - II. AE Ara, BX Mon, KX TrA, and CL Sco

    Science.gov (United States)

    Gałan, Cezary; Mikołajewska, Joanna; Hinkle, Kenneth H.

    2015-02-01

    Knowledge of the elemental abundances of symbiotic giants is essential to address the role of chemical composition in the evolution of symbiotic binaries, to map their parent population, and to trace their mass transfer history. However, there are few symbiotic giants for which the photospheric abundances are fairly well determined. This is the second in a series of papers on chemical composition of symbiotic giants determined from high-resolution (R ˜ 50 000) near-IR spectra. Results are presented for the late-type giant star in the AE Ara, BX Mon, KX TrA, and CL Sco systems. Spectrum synthesis employing standard local thermal equilibrium (LTE) analysis and stellar atmosphere models were used to obtain photospheric abundances of CNO and elements around the iron peak (Sc, Ti, Fe, and Ni). Our analysis resulted in sub-solar metallicities in BX Mon, KX TrA, and CL Sco by [Fe/H] ˜ -0.3 or -0.5 depending on the value of microturbulence. AE Ara shows metallicity closer to solar by ˜ 0.2 dex. The enrichment in 14N isotope found in all these objects indicates that the giants have experienced the first dredge-up. In the case of BX Mon first dredge-up is also confirmed by the low 12C/13C isotopic ratio of ˜ 8.

  7. Abundance analysis of a sample of evolved stars in the outskirts of Omega Centauri

    CERN Document Server

    Villanova, Sandro; Scarpa, Riccardo; Marconi, Gianni

    2009-01-01

    The globular cluster $\\omega$ Centauri (NGC 5139) is a puzzling stellar system harboring several distinct stellar populations whose origin still represents a unique astrophysical challenge. Current scenarios range from primordial chemical inhomogeneities in the mother cloud to merging of different sub-units and/or subsequent generations of enriched stars - with a variety of different pollution sources- within the same potential well. In this paper we study the chemical abundance pattern in the outskirts of Omega Centauri, half-way to the tidal radius (covering the range of 20-30 arcmin from the cluster center), and compare it with chemical trends in the inner cluster regions, in an attempt to explore whether the same population mix and chemical compositions trends routinely found in the more central regions is also present in the cluster periphery.We extract abundances of many elements from FLAMES/UVES spectra of 48 RGB stars using the equivalent width method and then analyze the metallicity distribution func...

  8. Meta-analysis of carrying capacity and abundance-area relationships in marine fish species

    DEFF Research Database (Denmark)

    Mantzouni, Irene

    fish produced by spawners in a given year which subsequently grow and survive to become vulnerable to fishing gear) have reacted to temperature fluctuations, and in particular to extremes of temperature, throughout the north Atlantic. Meta-analytical methods based on effect sizes were employed......Knowledge on the carrying capacity and the abundance-area relationships of fish is critical to evaluate the impacts of exploitation and climate on the sustainability and also the recovery potential of the populations. Of particular interest is climate change, inducing major consequences...... for population dynamics and life histories of marine biota as it progresses in the 21st century. In the present PhD project, a variety of meta-analytic methods was employed to statistically combine data across the north Atlantic distributions of 3 commercially and ecologically important species; cod (Gadus...

  9. Triplet transitions of neutral CO in the spectra of comets and the abundance of CO/sub 2/ or molecules containing the CO group in comets

    Energy Technology Data Exchange (ETDEWEB)

    Biermann, L.

    1976-03-01

    The high-dispersion spectra of comet Mrkos (1957 V) taken at Mt. Palomar by J. L. Greenstein and remeasured by A. Woszczyk contain many unidentified weak lines. The possibility that some of these lines belong to transitions between triplet levels of neutral CO molecules is investigated. Their presence would suggest excitation related to the dissociative recombination of a parent containing the CO group, which is first ionized by solar uv. Of 31 CO lines (of the Asundi and Triplet systems), 14 are masked by known or by questionably identified lines as statistically expected. Of the remaining 17, 13 coincide within a few tenths of an Angstrom with an unidentified line and 4 do not. These results are contrary to statistical expectations. (Some members of the third positive system of CO, which might be present, have not been included in the figures.) Although these figures strongly favor the identification proposed, the numbers are not large enough to support entirely the argument of a small statistical probability (0.2 percent) of the observed state. Also, the rotational structure of the CO bands for the triplet systems needs further investigation. C. F. Lillie's observations of comet Bennett (1970 II) between 1200 and 1800 A, especially of the fourth positive system of CO, seem to favor a cometary atmosphere characterized by a large relative abundance of CO/sub 2/ and/or molecules containing the CO group. A model outlined for comet Bennett at 0.8 a.u. seems to be approximately consistent with observations. The chemical aspects, however, especially need further consideration. New observations, particularly of the Cameron bands of CO, are needed to settle the questions raised.

  10. Analysis of the c-src gene product structure, abundance, and protein kinase activity in human neuroblastoma and glioblastoma cells.

    Science.gov (United States)

    O'Shaughnessy, J; Deseau, V; Amini, S; Rosen, N; Bolen, J B

    1987-01-01

    We have compared in different human neuroblastoma cell lines and human glioblastoma cells the expression level, structure, and tyrosine-specific protein kinase activity of pp60c-src. Our results show that not all human neuroblastoma cell lines express pp60c-src molecules with amino-terminal structural alterations. In neuroblastoma cells which possess pp60c-src with altered gel migration, the diminished polyacrylamide gel mobility of pp60c-src was found not to be dependent upon amino-terminal phosphorylations since extensive treatment of these molecules with phosphatase did not significantly change their gel migration properties. Similar differences in gel migration were observed when RNA from the various neuroblastoma and glioblastoma cells was translated in vitro using either rabbit reticulocyte or wheat germ lysates. White the level of c-src mRNA in the different cells analyzed was found to be similar, the abundance of pp60c-src in these same cells was found to vary by as much as 12-fold. This suggests that the abundance of pp60c-src in human neuroendocrine tumors is regulated through post-transcriptional and/or post-translational events which may be related to the stage of neuronal differentiation of the cells. Based upon determination of pp60c-src abundance by immunoblot analysis, we demonstrate that pp60c-src molecules derived from human neuroblastoma and glioblastoma cells have very similar in vitro protein kinase activities.

  11. Estimating stellar atmospheric parameters, absolute magnitudes and elemental abundances from the LAMOST spectra with Kernel-based Principal Component Analysis

    CERN Document Server

    Xiang, Maosheng; Shi, Jianrong; Yuan, Haibo; Huang, Yang; Luo, Ali; Zhang, Huawei; Zhao, Yongheng; Zhang, Jiannan; Ren, Juanjuan; Chen, Bingqiu; Wang, Chun; Li, Ji; Huo, Zhiying; Zhang, Wei; Wang, Jianling; Zhang, Yong; Hou, Yonghui; Wang, Yuefei

    2016-01-01

    Accurate determination of stellar atmospheric parameters and elemental abundances is crucial for Galactic archeology via large-scale spectroscopic surveys. In this paper, we estimate stellar atmospheric parameters -- effective temperature T_{\\rm eff}, surface gravity log g and metallicity [Fe/H], absolute magnitudes M_V and M_{Ks}, {\\alpha}-element to metal (and iron) abundance ratio [{\\alpha}/M] (and [{\\alpha}/Fe]), as well as carbon and nitrogen abundances [C/H] and [N/H] from the LAMOST spectra with amultivariate regressionmethod based on kernel-based principal component analysis, using stars in common with other surveys (Hipparcos, Kepler, APOGEE) as training data sets. Both internal and external examinations indicate that given a spectral signal-to-noise ratio (SNR) better than 50, our method is capable of delivering stellar parameters with a precision of ~100K for Teff, ~0.1 dex for log g, 0.3 -- 0.4mag for M_V and M_{Ks}, 0.1 dex for [Fe/H], [C/H] and [N/H], and better than 0.05 dex for [{\\alpha}/M] ([...

  12. Estimating stellar atmospheric parameters, absolute magnitudes and elemental abundances from the LAMOST spectra with Kernel-based principal component analysis

    Science.gov (United States)

    Xiang, M.-S.; Liu, X.-W.; Shi, J.-R.; Yuan, H.-B.; Huang, Y.; Luo, A.-L.; Zhang, H.-W.; Zhao, Y.-H.; Zhang, J.-N.; Ren, J.-J.; Chen, B.-Q.; Wang, C.; Li, J.; Huo, Z.-Y.; Zhang, W.; Wang, J.-L.; Zhang, Y.; Hou, Y.-H.; Wang, Y.-F.

    2017-01-01

    Accurate determination of stellar atmospheric parameters and elemental abundances is crucial for Galactic archaeology via large-scale spectroscopic surveys. In this paper, we estimate stellar atmospheric parameters - effective temperature Teff, surface gravity log g and metallicity [Fe/H], absolute magnitudes MV and MKs, α-element to metal (and iron) abundance ratio [α/M] (and [α/Fe]), as well as carbon and nitrogen abundances [C/H] and [N/H] from the Large Sky Area Multi-Object Fibre Spectroscopic Telescope (LAMOST) spectra with a multivariate regression method based on kernel-based principal component analysis, using stars in common with other surveys (Hipparcos, Kepler, Apache Point Observatory Galactic Evolution Experiment) as training data sets. Both internal and external examinations indicate that given a spectral signal-to-noise ratio (SNR) better than 50, our method is capable of delivering stellar parameters with a precision of ˜100 K for Teff, ˜0.1 dex for log g, 0.3-0.4 mag for MV and MKs, 0.1 dex for [Fe/H], [C/H] and [N/H], and better than 0.05 dex for [α/M] ([α/Fe]). The results are satisfactory even for a spectral SNR of 20. The work presents first determinations of [C/H] and [N/H] abundances from a vast data set of LAMOST, and, to our knowledge, the first reported implementation of absolute magnitude estimation directly based on a vast data set of observed spectra. The derived stellar parameters for millions of stars from the LAMOST surveys will be publicly available in the form of value-added catalogues.

  13. Estimating stellar atmospheric parameters, absolute magnitudes and elemental abundances from the LAMOST spectra with Kernel-based Principal Component Analysis

    Science.gov (United States)

    Xiang, M.-S.; Liu, X.-W.; Shi, J.-R.; Yuan, H.-B.; Huang, Y.; Luo, A.-L.; Zhang, H.-W.; Zhao, Y.-H.; Zhang, J.-N.; Ren, J.-J.; Chen, B.-Q.; Wang, C.; Li, J.; Huo, Z.-Y.; Zhang, W.; Wang, J.-L.; Zhang, Y.; Hou, Y.-H.; Wang, Y.-F.

    2016-10-01

    Accurate determination of stellar atmospheric parameters and elemental abundances is crucial for Galactic archeology via large-scale spectroscopic surveys. In this paper, we estimate stellar atmospheric parameters - effective temperature Teff, surface gravity log g and metallicity [Fe/H], absolute magnitudes MV and MKs, α-element to metal (and iron) abundance ratio [α/M] (and [α/Fe]), as well as carbon and nitrogen abundances [C/H] and [N/H] from the LAMOST spectra with a multivariate regression method based on kernel-based principal component analysis, using stars in common with other surveys (Hipparcos, Kepler, APOGEE) as training data sets. Both internal and external examinations indicate that given a spectral signal-to-noise ratio (SNR) better than 50, our method is capable of delivering stellar parameters with a precision of ˜100 K for Teff, ˜0.1 dex for log g, 0.3 - 0.4 mag for MV and MKs, 0.1 dex for [Fe/H], [C/H] and [N/H], and better than 0.05 dex for [α/M] ([α/Fe]). The results are satisfactory even for a spectral SNR of 20. The work presents first determinations of [C/H] and [N/H] abundances from a vast data set of LAMOST, and, to our knowledge, the first reported implementation of absolute magnitude estimation directly based on the observed spectra. The derived stellar parameters for millions of stars from the LAMOST surveys will be publicly available in the form of value-added catalogues.

  14. Topological analysis of protein co-abundance networks identifies novel host targets important for HCV infection and pathogenesis

    Directory of Open Access Journals (Sweden)

    McDermott Jason E

    2012-04-01

    Full Text Available Abstract Background High-throughput methods for obtaining global measurements of transcript and protein levels in biological samples has provided a large amount of data for identification of 'target' genes and proteins of interest. These targets may be mediators of functional processes involved in disease and therefore represent key points of control for viruses and bacterial pathogens. Genes and proteins that are the most highly differentially regulated are generally considered to be the most important. We present topological analysis of co-abundance networks as an alternative to differential regulation for confident identification of target proteins from two related global proteomics studies of hepatitis C virus (HCV infection. Results We analyzed global proteomics data sets from a cell culture study of HCV infection and from a clinical study of liver biopsies from HCV-positive patients. Using lists of proteins known to be interaction partners with pathogen proteins we show that the most differentially regulated proteins in both data sets are indeed enriched in pathogen interactors. We then use these data sets to generate co-abundance networks that link proteins based on similar abundance patterns in time or across patients. Analysis of these co-abundance networks using a variety of network topology measures revealed that both degree and betweenness could be used to identify pathogen interactors with better accuracy than differential regulation alone, though betweenness provides the best discrimination. We found that though overall differential regulation was not correlated between the cell culture and liver biopsy data, network topology was conserved to an extent. Finally, we identified a set of proteins that has high betweenness topology in both networks including a protein that we have recently shown to be essential for HCV replication in cell culture. Conclusions The results presented show that the network topology of protein co-abundance

  15. Gas Chromatography-Mass Spectrometry Based Isotopic Abundance Ratio Analysis of Biofield Energy Treated Methyl-2-napthylether (Nerolin)

    OpenAIRE

    2016-01-01

    Methyl-2-napthylether (nerolin) is an organic compound and has the applications in pharmaceutical, and perfume industry. The stable isotope ratio analysis is increasing importance in various field of scientific research. The objective of the current study was to evaluate the effect of the biofield energy treatment on the isotopic abundance ratios of PM+1/PM(2H/1H or 13C/12C or 17O/16O) and PM+2/PM (18O/16O) in nerolin using the gas chromatography-mass spectrometry (GC-MS). The compound neroli...

  16. Multiple Group Analysis in Multilevel Structural Equation Model Across Level 1 Groups.

    Science.gov (United States)

    Ryu, Ehri

    2015-01-01

    This article introduces and evaluates a procedure for conducting multiple group analysis in multilevel structural equation model across Level 1 groups (MG1-MSEM; Ryu, 2014). When group membership is at Level 1, multiple group analysis raises two issues that cannot be solved by a simple extension of the standard multiple group analysis in single-level structural equation model. First, the Level 2 data are not independent between Level 1 groups. Second, the standard procedure fails to take into account the dependency between members of different Level 1 groups within the same cluster. The MG1-MSEM approach provides solutions to these problems. In MG1-MSEM, the Level 1 mean structure is necessary to represent the differences between Level 1 groups within clusters. The Level 2 model is the same regardless of Level 1 group membership. A simulation study examined the performance of MUML (Muthén's maximum likelihood) estimation in MG1-MSEM. The MG1-MSEM approach is illustrated for both a multilevel path model and a multilevel factor model using empirical data sets.

  17. Differential chemical abundance analysis of a 47 Tucanæ asymptotic giant branch star with respect to Arcturus

    Science.gov (United States)

    Worley, C. C.; Cottrell, P. L.; Freeman, K. C.; Wylie-de Boer, E. C.

    2009-12-01

    This study resolves a discrepancy in the abundance of Zr in the 47 Tucanæ asymptotic giant branch (AGB) star Lee 2525. This star was observed using the echelle spectrograph on the 2.3-m telescope at Siding Spring Observatory. The analysis was undertaken by calibrating Lee 2525 with respect to the standard giant star Arcturus. This work emphasizes the importance of using a standard star with stellar parameters comparable to the star under analysis rather than a calibration with respect to the Sun as in Koch & McWilliam. Systematic errors in the analysis process are then minimized due to the similarity in atmospheric structure between the standard and programme stars. The abundances derived for Lee 2525 were found to be in general agreement with the Brown & Wallerstein values except for Zr. In this study Zr has a similar enhancement ([Zr/Fe] = +0.51 dex) to another light s-process element, Y ([Y/Fe] = +0.53 dex), which reflects current theory regarding the enrichment of s-process elements by nuclear processes within AGB stars. This is contrary to the results of Brown & Wallerstein where Zr was underabundant ([Zr/Fe] = -0.51 dex) and Y was overabundant ([Y/Fe] = +0.50 dex) with respect to Fe.

  18. Sensitization to group direction in the postgraduate training on Group-Analysis

    Directory of Open Access Journals (Sweden)

    Simone Bruschetta

    2014-09-01

    Full Text Available The psychodynamic training group here introduced is a part of the General Training on Group Analysis of the Centre of Palermo of COIRAG Postgraduate School on Analytic Psychotherapy. The training project’s aim, built for the class of the third year, develops a sensitization device which provide a unique set of aquarium. The aim of that methodological artifice is not to engage students on specific group management techniques, but to allow the whole class group to bring into play the complexity of relations, of which is necessary to have awareness in order to lead a group within an institutional context: The main clinical referents that we chose to monitor in this experience are the relationship between conductors and participants and the relationship between group, task and setting. The brief description of this methodology is also including the reporting of two "cases" treated in the course of training. Keywords: Group leadership, Founding dimension, Cultural themes 

  19. Cascade algorithm and multiresolution analysis on the Heisenberg group

    Institute of Scientific and Technical Information of China (English)

    LIU Heping; LIU Yu; PENG Lizhong; CHU Xiaoyong

    2005-01-01

    In this paper we investigate the relationship between the convergence of cascade algorithm and orthogonal (or biorthogonal) multiresolution analysis on the Heisenberg group. It is proved that the (strong) convergence of cascade algorithm together with the perfect reconstruction condition induces an orthogonal multiresolution analysis and vice versa. Similar results are also proved for biorthogonal multiresolution analysis.

  20. Spectroscopic Survey of {\\gamma} Doradus Stars I. Comprehensive atmospheric parameters and abundance analysis of {\\gamma} Doradus stars

    CERN Document Server

    Kahraman-Alicavus, F; De Cat, P; Soydugan, E; Kolaczkowski, Z; Ostrowski, J; Telting, J H; Uytterhoeven, K; Poretti, E; Rainer, M; Suarez, J C; Mantegazza, L; Kilmartin, P; Pollard, K R

    2016-01-01

    We present a spectroscopic survey of {\\gamma} Doradus stars. The high-resolution, high signal-to-noise spectra of fifty-two objects were collected by five different spectrographs. The spectral classification, atmospheric parameters ($T_{\\rm eff}$ , $\\log g$, {\\xi}), vsini and chemical composition of the stars were derived. The spectral and luminosity classes of the stars were found between A7 - G0 and IV - V, respectively. The initial values for $T_{\\rm eff}$ and $\\log g$ were determined from photometric indices and spectral energy distribution. Those parameters were improved by the analysis of hydrogen lines. The final values of $T_{\\rm eff}$, $\\log g$ and {\\xi} were derived from the iron lines analysis. For the whole sample, $T_{\\rm eff}$ values were found between 6000 K and 7900 K, while logg values range from 3.8 to 4.5 dex. Chemical abundances and v sin i values were derived by the spectrum synthesis method. The $v \\sin i$ values were found between 5 and 240 km s$^{-1}$. The chemical abundance pattern of...

  1. Comparison of pollinators and natural enemies: a meta-analysis of landscape and local effects on abundance and richness in crops.

    Science.gov (United States)

    Shackelford, Gorm; Steward, Peter R; Benton, Tim G; Kunin, William E; Potts, Simon G; Biesmeijer, Jacobus C; Sait, Steven M

    2013-11-01

    To manage agroecosystems for multiple ecosystem services, we need to know whether the management of one service has positive, negative, or no effects on other services. We do not yet have data on the interactions between pollination and pest-control services. However, we do have data on the distributions of pollinators and natural enemies in agroecosystems. Therefore, we compared these two groups of ecosystem service providers, to see if the management of farms and agricultural landscapes might have similar effects on the abundance and richness of both. In a meta-analysis, we compared 46 studies that sampled bees, predatory beetles, parasitic wasps, and spiders in fields, orchards, or vineyards of food crops. These studies used the proximity or proportion of non-crop or natural habitats in the landscapes surrounding these crops (a measure of landscape complexity), or the proximity or diversity of non-crop plants in the margins of these crops (a measure of local complexity), to explain the abundance or richness of these beneficial arthropods. Compositional complexity at both landscape and local scales had positive effects on both pollinators and natural enemies, but different effects on different taxa. Effects on bees and spiders were significantly positive, but effects on parasitoids and predatory beetles (mostly Carabidae and Staphylinidae) were inconclusive. Landscape complexity had significantly stronger effects on bees than it did on predatory beetles and significantly stronger effects in non-woody rather than in woody crops. Effects on richness were significantly stronger than effects on abundance, but possibly only for spiders. This abundance-richness difference might be caused by differences between generalists and specialists, or between arthropods that depend on non-crop habitats (ecotone species and dispersers) and those that do not (cultural species). We call this the 'specialist-generalist' or 'cultural difference' mechanism. If complexity has stronger

  2. OXYGEN ABUNDANCES IN CEPHEIDS

    Energy Technology Data Exchange (ETDEWEB)

    Luck, R. E.; Andrievsky, S. M. [Department of Astronomy, Case Western Reserve University, 10900 Euclid Avenue, Cleveland, OH 44106-7215 (United States); Korotin, S. N.; Kovtyukh, V. V., E-mail: luck@fafnir.astr.cwru.edu, E-mail: serkor@skyline.od.ua, E-mail: val@deneb1.odessa.ua, E-mail: scan@deneb1.odessa.ua [Department of Astronomy and Astronomical Observatory, Odessa National University, Isaac Newton Institute of Chile, Odessa Branch, Shevchenko Park, 65014 Odessa (Ukraine)

    2013-07-01

    Oxygen abundances in later-type stars, and intermediate-mass stars in particular, are usually determined from the [O I] line at 630.0 nm, and to a lesser extent, from the O I triplet at 615.7 nm. The near-IR triplets at 777.4 nm and 844.6 nm are strong in these stars and generally do not suffer from severe blending with other species. However, these latter two triplets suffer from strong non-local thermodynamic equilibrium (NLTE) effects and thus see limited use in abundance analyses. In this paper, we derive oxygen abundances in a large sample of Cepheids using the near-IR triplets from an NLTE analysis, and compare those abundances to values derived from a local thermodynamic equilibrium (LTE) analysis of the [O I] 630.0 nm line and the O I 615.7 nm triplet as well as LTE abundances for the 777.4 nm triplet. All of these lines suffer from line strength problems making them sensitive to either measurement complications (weak lines) or to line saturation difficulties (strong lines). Upon this realization, the LTE results for the [O I] lines and the O I 615.7 nm triplet are in adequate agreement with the abundance from the NLTE analysis of the near-IR triplets.

  3. Abundance analysis, spectral variability, and search for the presence of a magnetic field in the typical PGa star HD 19400

    Science.gov (United States)

    Hubrig, S.; Castelli, F.; González, J. F.; Carroll, T. A.; Ilyin, I.; Schöller, M.; Drake, N. A.; Korhonen, H.; Briquet, M.

    2014-08-01

    The aim of this study is to carry out an abundance determination, to search for spectral variability and for the presence of a weak magnetic field in the typical PGa star HD 19400. High-resolution, high signal-to-noise High Accuracy Radial-velocity Planet Searcher (HARPS) spectropolarimetric observations of HD 19400 were obtained at three different epochs in 2011 and 2013. For the first time, we present abundances of various elements determined using an ATLAS12 model, including the abundances of a number of elements not analysed by previous studies, such as Ne I, Ga II, and Xe II. Several lines of As II are also present in the spectra of HD 19400. To study the variability, we compared the behaviour of the line profiles of various elements. We report on the first detection of anomalous shapes of line profiles belonging to Mn and Hg, and the variability of the line profiles belonging to the elements Hg, P, Mn, Fe, and Ga. We suggest that the variability of the line profiles of these elements is caused by their non-uniform surface distribution, similar to the presence of chemical spots detected in HgMn stars. The search for the presence of a magnetic field was carried out using the moment technique and the Singular Value Decomposition (SVD) method. Our measurements of the magnetic field with the moment technique using 22 Mn II lines indicate the potential existence of a weak variable longitudinal magnetic field on the first epoch. The SVD method applied to the Mn II lines indicates = -76 ± 25 G on the first epoch, and at the same epoch the SVD analysis of the observations using the Fe II lines shows = -91 ± 35 G. The calculated false alarm probability values, 0.008 and 0.003, respectively, are above the value 10-3, indicating no detection.

  4. Harmonic and applied analysis from groups to signals

    CERN Document Server

    Mari, Filippo; Grohs, Philipp; Labate, Demetrio

    2015-01-01

    This contributed volume explores the connection between the theoretical aspects of harmonic analysis and the construction of advanced multiscale representations that have emerged in signal and image processing. It highlights some of the most promising mathematical developments in harmonic analysis in the last decade brought about by the interplay among different areas of abstract and applied mathematics. This intertwining of ideas is considered starting from the theory of unitary group representations and leading to the construction of very efficient schemes for the analysis of multidimensional data. After an introductory chapter surveying the scientific significance of classical and more advanced multiscale methods, chapters cover such topics as An overview of Lie theory focused on common applications in signal analysis, including the wavelet representation of the affine group, the Schrödinger representation of the Heisenberg group, and the metaplectic representation of the symplectic group An introduction ...

  5. Maritime Group Motion Analysis: Representation, Learning, Recognition, and Deviation Detection

    Science.gov (United States)

    2017-02-01

    Maritime Group Motion Analysis : Representation, Learning, Recognition, and Deviation Detection § Allen Waxman MultiSensor Scientific, LLC...while the authors were employed by, or sub-contractors of, Intelligent Software Solutions, Inc., of Colorado Springs, CO, USA, funded under contract...reading the PDF file of this manuscript.) Abstract - This paper introduces new concepts and methods in the analysis of group motions over extended

  6. Abundant Topological Outliers in Social Media Data and Their Effect on Spatial Analysis.

    Science.gov (United States)

    Westerholt, Rene; Steiger, Enrico; Resch, Bernd; Zipf, Alexander

    2016-01-01

    Twitter and related social media feeds have become valuable data sources to many fields of research. Numerous researchers have thereby used social media posts for spatial analysis, since many of them contain explicit geographic locations. However, despite its widespread use within applied research, a thorough understanding of the underlying spatial characteristics of these data is still lacking. In this paper, we investigate how topological outliers influence the outcomes of spatial analyses of social media data. These outliers appear when different users contribute heterogeneous information about different phenomena simultaneously from similar locations. As a consequence, various messages representing different spatial phenomena are captured closely to each other, and are at risk to be falsely related in a spatial analysis. Our results reveal indications for corresponding spurious effects when analyzing Twitter data. Further, we show how the outliers distort the range of outcomes of spatial analysis methods. This has significant influence on the power of spatial inferential techniques, and, more generally, on the validity and interpretability of spatial analysis results. We further investigate how the issues caused by topological outliers are composed in detail. We unveil that multiple disturbing effects are acting simultaneously and that these are related to the geographic scales of the involved overlapping patterns. Our results show that at some scale configurations, the disturbances added through overlap are more severe than at others. Further, their behavior turns into a volatile and almost chaotic fluctuation when the scales of the involved patterns become too different. Overall, our results highlight the critical importance of thoroughly considering the specific characteristics of social media data when analyzing them spatially.

  7. Understanding Groups in Outdoor Adventure Education through Social Network Analysis

    Science.gov (United States)

    Jostad, Jeremy; Sibthorp, Jim; Paisley, Karen

    2013-01-01

    Relationships are a critical component to the experience of an outdoor adventure education (OAE) program, therefore, more fruitful ways of investigating groups is needed. Social network analysis (SNA) is an effective tool to study the relationship structure of small groups. This paper provides an explanation of SNA and shows how it was used by the…

  8. Abundance analysis of prime B-type targets for asteroseismology I. Nitrogen excess in slowly-rotating beta Cephei stars

    CERN Document Server

    Morel, T; Aerts, C; Neiner, C; Briquet, M

    2006-01-01

    We present the results of a detailed NLTE abundance study of nine beta Cephei stars, all of them being prime targets for theoretical modelling: gamma Peg, delta Cet, nu Eri, beta CMa, xi1 CMa, V836 Cen, V2052 Oph, beta Cep and DD (12) Lac. The following chemical elements are considered: He, C, N, O, Mg, Al, Si, S and Fe. Our abundance analysis is based on a large number of time-resolved, high-resolution optical spectra covering in most cases the entire oscillation cycle of the stars. Nitrogen is found to be enhanced by up to 0.6 dex in four stars, three of which have severe constraints on their equatorial rotational velocity, \\Omega R, from seismic or line-profile variation studies: beta Cep (\\Omega R~26 km/s), V2052 Oph (\\Omega R~56 km/s), delta Cet (\\Omega R < 28 km/s) and xi1 CMa (\\Omega R sin i < 10 km/s). The existence of core-processed material at the surface of such largely unevolved, slowly-rotating objects is not predicted by current evolutionary models including rotation. We draw attention to ...

  9. A high precision chemical abundance analysis of the HAT-P-1 stellar binary: constraints on planet formation

    CERN Document Server

    Liu, F; Ramirez, I; Yong, D; Melendez, J

    2014-01-01

    We present a high-precision, differential elemental abundance analysis of the HAT-P-1 stellar binary based on high-resolution, high signal-to-noise ratio Keck/HIRES spectra. The secondary star in this double system is known to host a transiting giant planet while no planets have yet been detected around the primary star. The derived metallicities ([Fe/H]) of the primary and secondary stars are identical within the errors: $0.146 \\pm 0.014$ dex ($\\sigma$ = 0.033 dex) and $0.155 \\pm 0.007$ dex ($\\sigma$ = 0.023 dex), respectively. Extremely precise differential abundance ratios of 23 elements have been measured (mean error of $\\sigma$([X/Fe]) = 0.013 dex) and are found to be indistinguishable between the two stars: $\\Delta$[X/Fe] (secondary - primary) = $+0.001 \\pm 0.006$ dex ($\\sigma$ = 0.008 dex). The striking similarity in the chemical composition of the two stellar components in HAT-P-1 is contrary to the possible 0.04 dex level difference seen in 16 Cyg A+B, which also hosts a giant planet, at least 3 time...

  10. The solar photospheric abundance of carbon.Analysis of atomic carbon lines with the CO5BOLD solar model

    CERN Document Server

    Caffau, E; Bonifacio, P; Faraggiana, R; Steffen, M; Freytag, B; Kamp, I; Ayres, T R

    2010-01-01

    The use of hydrodynamical simulations, the selection of atomic data, and the computation of deviations from local thermodynamical equilibrium for the analysis of the solar spectra have implied a downward revision of the solar metallicity. We are in the process of using the latest simulations computed with the CO5BOLD code to reassess the solar chemical composition. We determine the solar photospheric carbon abundance by using a radiation-hydrodynamical CO5BOLD model, and compute the departures from local thermodynamical equilibrium by using the Kiel code. We measure equivalent widths of atomic CI lines on high resolution, high signal-to-noise ratio solar atlases. Deviations from local thermodynamic equilibrium are computed in 1D with the Kiel code. Our recommended value for the solar carbon abundance, relies on 98 independent measurements of observed lines and is A(C)=8.50+-0.06, the quoted error is the sum of statistical and systematic error. Combined with our recent results for the solar oxygen and nitrogen...

  11. Organic farming enhances soil microbial abundance and activity—A meta-analysis and meta-regression

    Science.gov (United States)

    Symnaczik, Sarah; Mäder, Paul; De Deyn, Gerlinde; Gattinger, Andreas

    2017-01-01

    Population growth and climate change challenge our food and farming systems and provide arguments for an increased intensification of agriculture. A promising option is eco-functional intensification through organic farming, an approach based on using and enhancing internal natural resources and processes to secure and improve agricultural productivity, while minimizing negative environmental impacts. In this concept an active soil microbiota plays an important role for various soil based ecosystem services such as nutrient cycling, erosion control and pest and disease regulation. Several studies have reported a positive effect of organic farming on soil health and quality including microbial community traits. However, so far no systematic quantification of whether organic farming systems comprise larger and more active soil microbial communities compared to conventional farming systems was performed on a global scale. Therefore, we conducted a meta-analysis on current literature to quantify possible differences in key indicators for soil microbial abundance and activity in organic and conventional cropping systems. All together we integrated data from 56 mainly peer-reviewed papers into our analysis, including 149 pairwise comparisons originating from different climatic zones and experimental duration ranging from 3 to more than 100 years. Overall, we found that organic systems had 32% to 84% greater microbial biomass carbon, microbial biomass nitrogen, total phospholipid fatty-acids, and dehydrogenase, urease and protease activities than conventional systems. Exclusively the metabolic quotient as an indicator for stresses on microbial communities remained unaffected by the farming systems. Categorical subgroup analysis revealed that crop rotation, the inclusion of legumes in the crop rotation and organic inputs are important farming practices affecting soil microbial community size and activity. Furthermore, we show that differences in microbial size and activity

  12. The baboon kidney transcriptome: analysis of transcript sequence, splice variants, and abundance.

    Directory of Open Access Journals (Sweden)

    Kimberly D Spradling

    Full Text Available The baboon is an invaluable model for the study of human health and disease, including many complex diseases of the kidney. Although scientists have made great progress in developing this animal as a model for numerous areas of biomedical research, genomic resources for the baboon, such as a quality annotated genome, are still lacking. To this end, we characterized the baboon kidney transcriptome using high-throughput cDNA sequencing (RNA-Seq to identify genes, gene variants, single nucleotide polymorphisms (SNPs, insertion-deletion polymorphisms (InDels, cellular functions, and key pathways in the baboon kidney to provide a genomic resource for the baboon. Analysis of our sequencing data revealed 45,499 high-confidence SNPs and 29,813 InDels comparing baboon cDNA sequences with the human hg18 reference assembly and identified 35,900 cDNAs in the baboon kidney, including 35,150 transcripts representing 15,369 genic genes that are novel for the baboon. Gene ontology analysis of our sequencing dataset also identified numerous biological functions and canonical pathways that were significant in the baboon kidney, including a large number of metabolic pathways that support known functions of the kidney. The results presented in this study catalogues the transcribed mRNAs, noncoding RNAs, and hypothetical proteins in the baboon kidney and establishes a genomic resource for scientists using the baboon as an experimental model.

  13. Assessing Group Interaction with Social Language Network Analysis

    Science.gov (United States)

    Scholand, Andrew J.; Tausczik, Yla R.; Pennebaker, James W.

    In this paper we discuss a new methodology, social language network analysis (SLNA), that combines tools from social language processing and network analysis to assess socially situated working relationships within a group. Specifically, SLNA aims to identify and characterize the nature of working relationships by processing artifacts generated with computer-mediated communication systems, such as instant message texts or emails. Because social language processing is able to identify psychological, social, and emotional processes that individuals are not able to fully mask, social language network analysis can clarify and highlight complex interdependencies between group members, even when these relationships are latent or unrecognized.

  14. Functional gene group analysis identifies synaptic gene groups as risk factor for schizophrenia.

    Science.gov (United States)

    Lips, E S; Cornelisse, L N; Toonen, R F; Min, J L; Hultman, C M; Holmans, P A; O'Donovan, M C; Purcell, S M; Smit, A B; Verhage, M; Sullivan, P F; Visscher, P M; Posthuma, D

    2012-10-01

    Schizophrenia is a highly heritable disorder with a polygenic pattern of inheritance and a population prevalence of ~1%. Previous studies have implicated synaptic dysfunction in schizophrenia. We tested the accumulated association of genetic variants in expert-curated synaptic gene groups with schizophrenia in 4673 cases and 4965 healthy controls, using functional gene group analysis. Identifying groups of genes with similar cellular function rather than genes in isolation may have clinical implications for finding additional drug targets. We found that a group of 1026 synaptic genes was significantly associated with the risk of schizophrenia (P=7.6 × 10(-11)) and more strongly associated than 100 randomly drawn, matched control groups of genetic variants (P<0.01). Subsequent analysis of synaptic subgroups suggested that the strongest association signals are derived from three synaptic gene groups: intracellular signal transduction (P=2.0 × 10(-4)), excitability (P=9.0 × 10(-4)) and cell adhesion and trans-synaptic signaling (P=2.4 × 10(-3)). These results are consistent with a role of synaptic dysfunction in schizophrenia and imply that impaired intracellular signal transduction in synapses, synaptic excitability and cell adhesion and trans-synaptic signaling play a role in the pathology of schizophrenia.

  15. Source apportionment of atmospheric PAHs in the Western Balkans by natural abundance radiocarbon analysis

    Energy Technology Data Exchange (ETDEWEB)

    Zdenek Zencak; Jana Klanova; Ivan Holoubek; Oerjan Gustafsson [Stockholm University, Stockholm (Sweden). Department of Applied Environmental Science

    2007-06-01

    Progress in source apportionment of priority combustion-derived atmospheric pollutants can be made by an inverse approach to inventory emissions, namely, receptor-based compound class-specific radiocarbon analysis (CCSRA) of target pollutants. In the present study, CCSRA of the combustion-derived polycyclic aromatic hydrocarbons (PAHs) present in the atmosphere of the countries of the former republic of Yugoslavia was performed. The carbon stable isotope composition ({delta}{sup 13}C) of PAHs varied between -27.68 and -27.19{per_thousand}, whereas {Delta}{sup 14}C values ranged from -568{per_thousand} for PAHs sampled in Kosovo to -288{per_thousand} for PAHs sampled in the Sarajevo area. The application of an isotopic mass balance model to these {Delta}{sup 14}C data revealed a significant contribution (35-65%) from the combustion of non-fossil material to the atmospheric PAH pollution, even in urban and industrialized areas. Furthermore, consistency was observed between the isotopic composition of PAHs obtained by high-volume sampling and those collected by passive sampling. This encourages the use of passive samplers for CCSRA applications. This marks the first time that a CCSRA investigation could be executed on a geographically wide scale, providing a quantitative field-based source apportionment, which points out that also non-fossil combustion processes should be targeted for remedial action. 36 refs., 1 fig., 3 tabs.

  16. Estimating wetland vegetation abundance from Landsat-8 operational land imager imagery: a comparison between linear spectral mixture analysis and multinomial logit modeling methods

    Science.gov (United States)

    Zhang, Min; Gong, Zhaoning; Zhao, Wenji; Pu, Ruiliang; Liu, Ke

    2016-01-01

    Mapping vegetation abundance by using remote sensing data is an efficient means for detecting changes of an eco-environment. With Landsat-8 operational land imager (OLI) imagery acquired on July 31, 2013, both linear spectral mixture analysis (LSMA) and multinomial logit model (MNLM) methods were applied to estimate and assess the vegetation abundance in the Wild Duck Lake Wetland in Beijing, China. To improve mapping vegetation abundance and increase the number of endmembers in spectral mixture analysis, normalized difference vegetation index was extracted from OLI imagery along with the seven reflective bands of OLI data for estimating the vegetation abundance. Five endmembers were selected, which include terrestrial plants, aquatic plants, bare soil, high albedo, and low albedo. The vegetation abundance mapping results from Landsat OLI data were finally evaluated by utilizing a WorldView-2 multispectral imagery. Similar spatial patterns of vegetation abundance produced by both fully constrained LSMA algorithm and MNLM methods were observed: higher vegetation abundance levels were distributed in agricultural and riparian areas while lower levels in urban/built-up areas. The experimental results also indicate that the MNLM model outperformed the LSMA algorithm with smaller root mean square error (0.0152 versus 0.0252) and higher coefficient of determination (0.7856 versus 0.7214) as the MNLM model could handle the nonlinear reflection phenomenon better than the LSMA with mixed pixels.

  17. Structure Analysis and Ion Abundance in CID- MS- MS Spectra of Isomeric Oligosaccharides Using Quadrupole Time-of- flight Mass Spectrometry: Distinguishing between Isomeric Oligosaccharides

    Institute of Scientific and Technical Information of China (English)

    Tohru YAMAGAKI; Kazuo TACHIBANA

    2001-01-01

    @@ N - Linked oligosaccharide were analyzed by using electrospray ionization (ESI) quadrupole time - of- fight mass spectrometry(Q - Tof MS).The isomers showed the same MS and collisioninduced desociation(CID) MS - MS spectra in the m/z values because the sequence of the sugar residues was the same.But the relative ion abundance of the specific fragment ion was greatly different between the isomers.So, the isomeric oligosacchariedes were distinguished by using the ion abundance in their CID -MS - MS spectra.Discussing the ion abundance in accurate level, quantitative analysis of the mixtures of isomers were also performed.

  18. Abundances of platinum group elements in native sulfur condensates from the Niuatahi-Motutahi submarine volcano, Tonga rear arc: Implications for PGE mineralization in porphyry deposits

    Science.gov (United States)

    Park, Jung-Woo; Campbell, Ian H.; Kim, Jonguk

    2016-02-01

    Some porphyry Cu-Au deposits, which are enriched in Pd, are potentially an economic source of Pd. Magmatic volatile phases are thought to transport the platinum group elements (PGEs) from the porphyry source magma to the point of deposition. However, the compatibilities of the PGEs in magmatic volatile phases are poorly constrained. We report PGE and Re contents in native sulfur condensates and associated altered dacites from the Niuatahi-Motutahi submarine volcano, Tonga rear arc, in order to determine the compatibility of PGEs and Re in magmatic volatile phases, and their mobility during secondary hydrothermal alteration. The native sulfur we analyzed is the condensate of a magmatic volatile phase exsolved from the Niuatahi-Motutahi magma. The PGEs are moderately enriched in the sulfur condensates in comparison to the associated fresh dacite, with enrichment factors of 11-285, whereas Au, Cu and Re are strongly enriched with enrichment factors of ∼20,000, ∼5000 and ∼800 respectively. Although the PGEs are moderately compatible into magmatic volatile phases, their compatibility is significantly lower than that of Au, Cu and Re. Furthermore, the compatibility of PGEs decrease in the order: Ru > Pt > Ir > Pd. This trend is also observed in condensates and sublimates from other localities. PGE mineralization in porphyry Cu-Au deposits is characterized by substantially higher Pd/Pt (∼7-60) and Pd/Ir (∼100-10,500) than typical orthomagmatic sulfide deposits (e.g. Pd/Pt ∼0.6 and Pd/Ir ∼20 for the Bushveld). It has previously been suggested that the high mobility of Pd, relative to the other PGEs, may account for the preferential enrichment of Pd in porphyry Cu-Au deposits. However, the low compatibility of Pd in the volatile phase relative to the other PGEs, shown in this study, invalidates this explanation. We suggest that the PGE geochemistry of Pd-rich Cu-Au deposits is principally derived from the PGE characteristics of the magma from which the ore

  19. Identification of Biodegradation Pathways in a Multi-Process Phytoremediation System (MPPS) Using Natural Abundance 14C Analysis of PLFA

    Science.gov (United States)

    Cowie, B. R.; Greenberg, B. M.; Slater, G. F.

    2008-12-01

    Optimizing remediation of petroleum-contaminated soils requires thorough understanding of the mechanisms and pathways involved in a proposed remediation system. In many engineered and natural attenuation systems, multiple degradation pathways may contribute to observed contaminant mass losses. In this study, biodegradation in the soil microbial community was identified as a major pathway for petroleum hydrocarbon removal in a Multi-Process Phytoremediation System (MPPS) using natural abundance 14C analysis of Phospholipid Fatty Acids (PLFA). In contaminated soils, PLFA were depleted in Δ14C to less than -800‰, directly demonstrating microbial uptake and utilization of petroleum derived carbon (Δ14C = -992‰) during bioremediation. Mass balance indicated that more than 80% of microbial carbon was derived from petroleum hydrocarbons and a maximum of 20% was produced from metabolism of modern carbon sources. In contrast, in a nearby uncontaminated control soil, the microbial community maintained a nearly modern 14C signature, suggesting preferential degradation of more labile, recent carbon. Mass balance using δ13C and Δ14C of soil CO2 demonstrated that mineralization of petroleum carbon contributed 60-65% of soil CO2 at the contaminated site. The remainder was derived from atmospheric (27-30%) and decomposition of non- petroleum natural organic carbon (5-10%). The clean control exhibited substantially lower CO2 concentrations that were derived from atmospheric (55%) and natural organic carbon (45%) sources. This study highlights the value of using multiple carbon isotopes to identify degradation pathways in petroleum- contaminated soils undergoing phytoremediation and the power of natural abundance 14C to detect petroleum metabolism in natural microbial communities.

  20. Application of Lie group analysis in geophysical fluid dynamics

    CERN Document Server

    Ibragimov, Ranis

    2011-01-01

    This is the first monograph dealing with the applications of the Lie group analysis to the modeling equations governing internal wave propagation in the deep ocean. A new approach to describe the nonlinear interactions of internal waves in the ocean is presented. While the central idea of the book is to investigate oceanic internal waves through the prism of Lie group analysis, it is also shown for the first time that internal wave beams, representing exact solutions to the equation of motion of stratified fluid, can be found by solving the given model as invariant solutions of nonlinear equat

  1. Inferring Group Processes from Computer-Mediated Affective Text Analysis

    Energy Technology Data Exchange (ETDEWEB)

    Schryver, Jack C [ORNL; Begoli, Edmon [ORNL; Jose, Ajith [Missouri University of Science and Technology; Griffin, Christopher [Pennsylvania State University

    2011-02-01

    Political communications in the form of unstructured text convey rich connotative meaning that can reveal underlying group social processes. Previous research has focused on sentiment analysis at the document level, but we extend this analysis to sub-document levels through a detailed analysis of affective relationships between entities extracted from a document. Instead of pure sentiment analysis, which is just positive or negative, we explore nuances of affective meaning in 22 affect categories. Our affect propagation algorithm automatically calculates and displays extracted affective relationships among entities in graphical form in our prototype (TEAMSTER), starting with seed lists of affect terms. Several useful metrics are defined to infer underlying group processes by aggregating affective relationships discovered in a text. Our approach has been validated with annotated documents from the MPQA corpus, achieving a performance gain of 74% over comparable random guessers.

  2. Global gene expression analysis reveals reduced abundance of putative microRNA targets in human prostate tumours

    Directory of Open Access Journals (Sweden)

    Xie Yi

    2009-02-01

    Full Text Available Abstract Background Recently, microRNAs (miRNAs have taken centre stage in the field of human molecular oncology. Several studies have shown that miRNA profiling analyses offer new possibilities in cancer classification, diagnosis and prognosis. However, the function of miRNAs that are dysregulated in tumours remains largely a mystery. Global analysis of miRNA-target gene expression has helped illuminate the role of miRNAs in developmental gene expression programs, but such an approach has not been reported in cancer transcriptomics. Results In this study, we globally analysed the expression patterns of miRNA target genes in prostate cancer by using several public microarray datasets. Intriguingly, we found that, in contrast to global mRNA transcript levels, putative miRNA targets showed a reduced abundance in prostate tumours relative to benign prostate tissue. Additionally, the down-regulation of these miRNA targets positively correlated with the number of types of miRNA target-sites in the 3' untranslated regions of these targets. Further investigation revealed that the globally low expression was mainly driven by the targets of 36 specific miRNAs that were reported to be up-regulated in prostate cancer by a miRNA expression profiling study. We also found that the transcript levels of miRNA targets were lower in androgen-independent prostate cancer than in androgen-dependent prostate cancer. Moreover, when the global analysis was extended to four other cancers, significant differences in transcript levels between miRNA targets and total mRNA backgrounds were found. Conclusion Global gene expression analysis, along with further investigation, suggests that miRNA targets have a significantly reduced transcript abundance in prostate cancer, when compared with the combined pool of all mRNAs. The abnormal expression pattern of miRNA targets in human cancer could be a common feature of the human cancer transcriptome. Our study may help to shed new

  3. Joint Analysis of Gravitational Lensing, Clustering and Abundance: Toward the Unification of Large-Scale Structure Analysis

    CERN Document Server

    Yoo, Jaiyul

    2012-01-01

    We explore three different methods based on weak lensing to extract cosmological constraints from the large-scale structure. In the first approach (method I), small-scale galaxy lensing measurements of their halo mass provide a constraint on the halo bias, which can be combined with the large-scale galaxy clustering to measure the dark matter clustering. In the second approach (method II), large-scale galaxy clustering and large-scale galaxy-galaxy lensing can be combined into a direct measurement of the dark matter clustering. These two methods can be combined into one method I+II to make use of lensing measurements on all scales. In the third approach (method III), we add abundance information to the method I. We explore the statistical power of these three approaches as a function of galaxy luminosity to investigate the optimal mass range for each method and their cosmological constraining power. In the case of the SDSS, we find that the three methods give comparable constraints, but not in the same mass r...

  4. Genome analysis of Excretory/Secretory proteins in Taenia solium reveals their Abundance of Antigenic Regions (AAR)

    Science.gov (United States)

    Gomez, Sandra; Adalid-Peralta, Laura; Palafox-Fonseca, Hector; Cantu-Robles, Vito Adrian; Soberón, Xavier; Sciutto, Edda; Fragoso, Gladis; Bobes, Raúl J.; Laclette, Juan P.; Yauner, Luis del Pozo; Ochoa-Leyva, Adrián

    2015-01-01

    Excretory/Secretory (ES) proteins play an important role in the host-parasite interactions. Experimental identification of ES proteins is time-consuming and expensive. Alternative bioinformatics approaches are cost-effective and can be used to prioritize the experimental analysis of therapeutic targets for parasitic diseases. Here we predicted and functionally annotated the ES proteins in T. solium genome using an integration of bioinformatics tools. Additionally, we developed a novel measurement to evaluate the potential antigenicity of T. solium secretome using sequence length and number of antigenic regions of ES proteins. This measurement was formalized as the Abundance of Antigenic Regions (AAR) value. AAR value for secretome showed a similar value to that obtained for a set of experimentally determined antigenic proteins and was different to the calculated value for the non-ES proteins of T. solium genome. Furthermore, we calculated the AAR values for known helminth secretomes and they were similar to that obtained for T. solium. The results reveal the utility of AAR value as a novel genomic measurement to evaluate the potential antigenicity of secretomes. This comprehensive analysis of T. solium secretome provides functional information for future experimental studies, including the identification of novel ES proteins of therapeutic, diagnosis and immunological interest. PMID:25989346

  5. Analysis of Cross-Polarization Dynamics between Two Abundant Nuclei, 19F and 1H, Based on Spin Thermodynamics Theory

    Science.gov (United States)

    Ando, Shinji; Harris, Robin K.; Reinsberg, Stefan A.

    1999-11-01

    The phenomenological theory of spin thermodynamics based on the spin temperature hypothesis was employed to describe the cross-polarization (CP) dynamics between two abundant nuclei, 19F and 1H, when the number of fluorine atoms is not substantially less than the number of hydrogens. The influence of T1ρ's of both nuclei and the relative magnitude (heat capacity) of the two spin baths must be incorporated explicitly into the analysis in order to derive values for the parameters involved in the CP dynamics. Numerical calculations were performed to clarify the difference in the evolution of magnetization in variable contact time CP experiments between the 1H → 13C and 1H → 19F cases. A new type of CP-drain experiment was developed for observing the residual 1H magnetization after 1H → 19F CP. 19F direct polarization magic-angle spinning (MAS), 1H → 19F CP, and 1H → 19F CP-drain MAS NMR spectra have been measured for a fluorinated polyimide, 6FDA/ODA. The CP dynamics between 1H and 19F for the polyimide were analyzed on the basis of the spin thermodynamics theory. The constant for polarization transfer (THF) was determined by the analysis using the effective CP parameters, which were directly obtained from the CP and CP-drain experiments, together with independently measured values of TH1ρ and TF1ρ.

  6. Genome analysis of Excretory/Secretory proteins in Taenia solium reveals their Abundance of Antigenic Regions (AAR).

    Science.gov (United States)

    Gomez, Sandra; Adalid-Peralta, Laura; Palafox-Fonseca, Hector; Cantu-Robles, Vito Adrian; Soberón, Xavier; Sciutto, Edda; Fragoso, Gladis; Bobes, Raúl J; Laclette, Juan P; Yauner, Luis del Pozo; Ochoa-Leyva, Adrián

    2015-05-19

    Excretory/Secretory (ES) proteins play an important role in the host-parasite interactions. Experimental identification of ES proteins is time-consuming and expensive. Alternative bioinformatics approaches are cost-effective and can be used to prioritize the experimental analysis of therapeutic targets for parasitic diseases. Here we predicted and functionally annotated the ES proteins in T. solium genome using an integration of bioinformatics tools. Additionally, we developed a novel measurement to evaluate the potential antigenicity of T. solium secretome using sequence length and number of antigenic regions of ES proteins. This measurement was formalized as the Abundance of Antigenic Regions (AAR) value. AAR value for secretome showed a similar value to that obtained for a set of experimentally determined antigenic proteins and was different to the calculated value for the non-ES proteins of T. solium genome. Furthermore, we calculated the AAR values for known helminth secretomes and they were similar to that obtained for T. solium. The results reveal the utility of AAR value as a novel genomic measurement to evaluate the potential antigenicity of secretomes. This comprehensive analysis of T. solium secretome provides functional information for future experimental studies, including the identification of novel ES proteins of therapeutic, diagnosis and immunological interest.

  7. Non-LTE Analysis of the Sodium Abundance of Metal-Poor Stars in the Galactic Disk and Halo

    Institute of Scientific and Technical Information of China (English)

    Yoichi Takeda; Gang Zhao; Masahide Takada-Hidai; Yu-Qin Chen; Yu-ji Saito; Hua-Wei Zhang

    2003-01-01

    We performed an extensive non-LTE analysis of the neutral sodiumlines of Na I 5683/5688, 5890/5896, 6154/6161, and 8183/8195 in disk/halo starsof types F-K covering a wide metallicity range (-4 [Fe/H] +0.4), using ourown data as well as data collected from the literature. For comparatively metal-rich disk stars (-1 [Fe/H] +0.4) where the weaker 6154/6161 lines are thebest abundance indicators, we confirmed [Na/Fe] ~ 0 with an "upturn" (i.e., ashallow/broad dip around -0.5 [Fe/H] 0) as already reported in previousstudies. For the metal-deficient halo stars, where the much stronger 5890/5896 or8183/8195 lines subject to considerable (negative) non-LTE corrections amountingto 0.5 dex have to be used, our analysis suggests mildly "subsolar" [Na/Fe] valuesdown to ~ -0.4 (with a somewhat large scatter of ~±0.2 dex) on the average at thetypical halo metallicity of [Fe/H] ~ -2, followed by a rise again to a near-solar ratioof [Na/Fe] ~ 0 at the very metal-poor regime [Fe/H] ~ -3 to -4. These resultsare discussed in comparison with the previous observational studies along with thetheoretical predictions from the available chemical evolution models.

  8. Two Groups of Red Giants with Distinct Chemical Abundances in the Bulge Globular Cluster NGC 6553 Through the Eyes of APOGEE

    Science.gov (United States)

    Tang, Baitian; Cohen, Roger; Geisler, Douglas; Schiavon, Ricardo P.; Majewski, Steven R.; Villanova, Sandro; Carrera, Ricardo; Zamora, Olga; Garcia-Hernandez, D.; Shetrone, Matthew D.; Frinchaboy, Peter M.; Fernandez Trincado, Jose Gregorio; APOGEE Team

    2017-01-01

    Multiple populations revealed in globular clusters (GCs) are important windows to the formation and evolution of these stellar systems. The metal-rich GCs in the Galactic bulge are an indispensable part of this picture, but the high optical extinction in this region has prevented extensive research. In this work, we use the high resolution near-infrared (NIR) spectroscopic data from APOGEE to study the chemical abundances of NGC 6553, which is one of the most metal-rich bulge GCs. We identify ten red giants as cluster members using their positions, radial velocities, iron abundances, and NIR photometry. Our sample stars show a mean radial velocity of -0.14 km/s, and a mean [Fe/H] of -0.15. We clearly separate two populations of stars in C and N in this GC for the first time. NGC 6553 is the most metal-rich GC where the multiple stellar population phenomenon is found until now. Substantial chemical variations are also found in Na, O, and Al. However, the two populations show similar Si, Ca, and iron-peak element abundances. Therefore, we infer that the CNO, NeNa, and MgAl cycles have been activated, but the MgAl cycle is too weak to show its effect on Mg. The Si leakage from the MgAl cycle is negligible. Type Ia and Type II supernovae do not seem to have significantly polluted the second generation stars. Comparing the APOGEE results with other GC studies, we find that NGC 6553 shows similar chemical variations as other relatively metal-rich GCs. We also confront current GC formation theories with our results, and suggest possible avenues for improvement in the models.

  9. Two groups of red giants with distinct chemical abundances in the bulge globular cluster NGC 6553 through the eyes of APOGEE

    Science.gov (United States)

    Tang, Baitian; Cohen, Roger E.; Geisler, Doug; Schiavon, Ricardo P.; Majewski, Steven R.; Villanova, Sandro; Carrera, Ricardo; Zamora, Olga; Garcia-Hernandez, D. A.; Shetrone, Matthew; Frinchaboy, Peter; Meza, Andres; Fernández-Trincado, J. G.; Muñoz, Ricardo R.; Lin, Chien-Cheng; Lane, Richard R.; Nitschelm, Christian; Pan, Kaike; Bizyaev, Dmitry; Oravetz, Daniel; Simmons, Audrey

    2017-02-01

    Multiple populations revealed in globular clusters (GCs) are important windows to the formation and evolution of these stellar systems. The metal-rich GCs in the Galactic bulge are an indispensable part of this picture, but the high optical extinction in this region has prevented extensive research. In this work, we use the high-resolution near-infrared (NIR) spectroscopic data from Apache Point Observatory Galactic Evolution Experiment (APOGEE) to study the chemical abundances of NGC 6553, which is one of the most metal-rich bulge GCs. We identify 10 red giants as cluster members using their positions, radial velocities, iron abundances, and NIR photometry. Our sample stars show a mean radial velocity of -0.14 ± 5.47 km s-1, and a mean [Fe/H] of -0.15 ± 0.05. We clearly separate two populations of stars in C and N in this GC for the first time. NGC 6553 is the most metal-rich GC where the multiple stellar population phenomenon is found until now. Substantial chemical variations are also found in Na, O, and Al. However, the two populations show similar Si, Ca, and iron-peak element abundances. Therefore, we infer that the CNO, NeNa, and MgAl cycles have been activated, but the MgAl cycle is too weak to show its effect on Mg. Type Ia and Type II supernovae do not seem to have significantly polluted the second generation stars. Comparing with other GC studies, NGC 6553 shows similar chemical variations as other relatively metal-rich GCs. We also confront current GC formation theories with our results, and suggest possible avenues for improvement in the models.

  10. Functional Renormalisation Group analysis of Tensorial Group Field Theories on $\\mathbb{R}^d$

    CERN Document Server

    Geloun, Joseph Ben; Oriti, Daniele

    2016-01-01

    Rank-d Tensorial Group Field Theories are quantum field theories defined on a group manifold $G^{\\times d}$, which represent a non-local generalization of standard QFT, and a candidate formalism for quantum gravity, since, when endowed with appropriate data, they can be interpreted as defining a field theoretic description of the fundamental building blocks of quantum spacetime. Their renormalisation analysis is crucial both for establishing their consistency as quantum field theories, and for studying the emergence of continuum spacetime and geometry from them. In this paper, we study the renormalisation group flow of two simple classes of TGFTs, defined for the group $G=\\mathbb{R}$ for arbitrary rank, both without and with gauge invariance conditions, by means of functional renormalisation group techniques. The issue of IR divergences is tackled by the definition of a proper thermodynamic limit for TGFTs. We map the phase diagram of such models, in a simple truncation, and identify both UV and IR fixed poin...

  11. Applying an Activity System to Online Collaborative Group Work Analysis

    Science.gov (United States)

    Choi, Hyungshin; Kang, Myunghee

    2010-01-01

    This study determines whether an activity system provides a systematic framework to analyse collaborative group work. Using an activity system as a unit of analysis, the research examined learner behaviours, conflicting factors and facilitating factors while students engaged in collaborative work via asynchronous computer-mediated communication.…

  12. On the Variable Selection Problem in Multiple Group Discriminant Analysis.

    Science.gov (United States)

    Huberty, Carl J.

    This study was concerned with various schemes for reducing the number of variables in a multivariate analysis. Two sets of illustrative data were used; the numbers of criterion groups were 3 and 5. The proportion of correct classifications was employed as an index of discriminatory power of each subset of variables selected. Of the four procedures…

  13. Efficiency Evaluation of Research Groups Using Data Envelopment Analysis

    Directory of Open Access Journals (Sweden)

    Ehssan Jandaghi

    2015-01-01

    Full Text Available The purpose of this study is to evaluate and compare efficiency of research groups in the Center of Social and Cultural Research. There are several tools for efficiency evaluation. The method used in this study was Data Envelopment Analysis (DEA in which rate of output is evaluated by input and effective and non-effective units are determined. The first step in DEA is to prepare a list of inputs and outputs. The inputs in this study were personnel and administrative costs, the ratio of group staff to the total staff of the center and person-hours of labor. The outputs of this study contained the number of finished research projects, proportion of allocated budget to the total budget issued and the Percent of the projects’ progress. The survey was carried out in 20 research groups, using DEA method. The analysis indicated that 5 groups were efficient and 3 groups were on border line. To improve non-efficient groups and converting them to efficient ones, we suggest some adjustments in inputs and outputs.

  14. Two Groups of Red Giants with Distinct Chemical Abundances in the Bulge Globular Cluster NGC 6553 Through the Eyes of APOGEE

    CERN Document Server

    Tang, Baitian; Geisler, Doug; Schiavon, Ricardo; Majewski, Steven R; Villanova, Sandro; Carrera, Ricardo; Zamora, Olga; Garcia-Hernandez, D A; Shetrone, Matthew; Frinchaboy, Peter; Meza, Andres; Fernández-Trincado, J G; Muñoz, Ricardo R; Lin, Chien-Cheng; Lane, Richard R; Nitschelm, Christian; Pan, Kaike; Bizyaev, Dmitry; Oravetz, Daniel; Simmons, Audrey

    2016-01-01

    Multiple populations revealed in globular clusters (GCs) are important windows to the formation and evolution of these stellar systems. The metal-rich GCs in the Galactic bulge are an indispensable part of this picture, but the high optical extinction in this region has prevented extensive research. In this work, we use the high resolution near-infrared (NIR) spectroscopic data from APOGEE to study the chemical abundances of NGC 6553, which is one of the most metal-rich bulge GCs. We identify ten red giants as cluster members using their positions, radial velocities, iron abundances, and NIR photometry. Our sample stars show a mean radial velocity of $-0.14\\pm5.47$ km s$^{-1}$, and a mean [Fe/H] of $-0.15\\pm 0.05$. We clearly separate two populations of stars in C and N in this GC for the first time. NGC 6553 is the most metal-rich GC where the multiple stellar population phenomenon is found until now. Substantial chemical variations are also found in Na, O, and Al. However, the two populations show similar S...

  15. Latent cluster analysis of ALS phenotypes identifies prognostically differing groups.

    Directory of Open Access Journals (Sweden)

    Jeban Ganesalingam

    Full Text Available BACKGROUND: Amyotrophic lateral sclerosis (ALS is a degenerative disease predominantly affecting motor neurons and manifesting as several different phenotypes. Whether these phenotypes correspond to different underlying disease processes is unknown. We used latent cluster analysis to identify groupings of clinical variables in an objective and unbiased way to improve phenotyping for clinical and research purposes. METHODS: Latent class cluster analysis was applied to a large database consisting of 1467 records of people with ALS, using discrete variables which can be readily determined at the first clinic appointment. The model was tested for clinical relevance by survival analysis of the phenotypic groupings using the Kaplan-Meier method. RESULTS: The best model generated five distinct phenotypic classes that strongly predicted survival (p<0.0001. Eight variables were used for the latent class analysis, but a good estimate of the classification could be obtained using just two variables: site of first symptoms (bulbar or limb and time from symptom onset to diagnosis (p<0.00001. CONCLUSION: The five phenotypic classes identified using latent cluster analysis can predict prognosis. They could be used to stratify patients recruited into clinical trials and generating more homogeneous disease groups for genetic, proteomic and risk factor research.

  16. Linking isoprenoidal GDGT membrane lipid distributions with gene abundances of ammonia-oxidizing Thaumarchaeota and uncultured crenarchaeotal groups in the water column of a tropical lake (Lake Challa, East Africa).

    Science.gov (United States)

    Buckles, Laura K; Villanueva, Laura; Weijers, Johan W H; Verschuren, Dirk; Damsté, Jaap S Sinninghe

    2013-09-01

    Stratified lakes are important reservoirs of microbial diversity and provide habitats for niche differentiation of Archaea. In this study, we used a lipid biomarker/DNA-based approach to reveal the diversity and abundance of Archaea in the water column of Lake Challa (East Africa). Concentrations of intact polar lipid (IPL) crenarchaeol, a specific biomarker of Thaumarchaeota, were enhanced (1 ng l(-1) ) at the oxycline/nitrocline. The predominance of the more labile IPL hexose-phosphohexose crenarchaeol indicated the presence of an actively living community of Thaumarchaeota. Archaeal 16S rRNA clone libraries revealed the presence of thaumarchaeotal groups 1.1a and 1.1b at and above the oxycline. In the anoxic deep water, amoA gene abundance was an order of magnitude lower than at the oxycline and high abundance (∼90 ng l(-1) ) of an IPL with the acyclic glycerol dialkyl glycerol tetraether (GDGT-0) was evident. The predominance of archaeal 16S rRNA sequences affiliated to the uncultured crenarchaeota groups 1.2 and miscellaneous crenarchaeotic group (MCG) points to an origin of GDGT-0 from uncultured crenarchaeota. This study demonstrates the importance of thermal stratification and nutrient availability in the distribution of archaeal groups in lakes, which is relevant to constrain and validate temperature proxies based on archaeal GDGTs (i.e. TEX86 ).

  17. A Grouping Method of Distribution Substations Using Cluster Analysis

    Science.gov (United States)

    Ohtaka, Toshiya; Iwamoto, Shinichi

    Recently, it has been considered to group distribution substations together for evaluating the reinforcement planning of distribution systems. However, the grouping is carried out by the knowledge and experience of an expert who is in charge of distribution systems, and a subjective feeling of a human being causes ambiguous grouping at the moment. Therefore, a method for imitating the grouping by the expert has been desired in order to carry out a systematic grouping which has numerical corroboration. In this paper, we propose a grouping method of distribution substations using cluster analysis based on the interconnected power between the distribution substations. Moreover, we consider the geographical constraints such as rivers, roads, business office boundaries and branch boundaries, and also examine a method for adjusting the interconnected power. Simulations are carried out to verify the validity of the proposed method using an example system. From the simulation results, we can find that the imitation of the grouping by the expert becomes possible due to considering the geographical constraints and adjusting the interconnected power, and also the calculation time and iterations can be greatly reduced by introducing the local and tabu search methods.

  18. Abundances of Volatile - Bearing Species from Evolved Gas Analysis of Samples from the Rocknest Aeolian Bedform in Gale Crater

    Science.gov (United States)

    Archer, P. D., Jr.; Franc, H. B.; Sutter, B.; McAdam, A.; Ming, D. W.; Morris, R. V.; Mahaffy, P. R.

    2013-01-01

    The Sample Analysis at Mars (SAM) instrument suite on board the Mars Science Laboratory (MSL) recently ran four samples from an aeolian bedform named Rocknest. SAM detected the evolution of H2O, CO2, O2, and SO2, indicative of the presence of multiple volatile bearing species (Fig 1). The Rocknest bedform is a windblown deposit selected as representative of both the windblown material in Gale crater as well as the globally-distributed martian dust. Four samples of Rocknest material were analyzed by SAM, all from the fifth scoop taken at this location. The material delivered to SAM passed through a 150 m sieve and is assumed to have been well mixed during the sample acquisition/preparation/handoff process. SAM heated the Rocknest samples to approx.835 C at a ramp rate of 35 C/min with a He carrier gas flow rate of apprx.1.5 standard cubic centimeters per minute and at an oven pressure of 30 mbar [1]. Evolved gases were detected by a quadrupole mass spectrometer (QMS). This abstract presents the molar abundances of H2O, CO2, O2, and SO2 as well as their concentration in rocknest samples using an estimated sample mass.

  19. Electromagnetic Compatibility Analysis Group VA-H3

    Science.gov (United States)

    Armanda, Carlos A.

    2008-01-01

    During the eight weeks working at NASA, I was fortunate enough to work with the Expendable Launch Vehicle's (ELV) Electromagnetic Compatibility (EMC) Team, who is responsible for the evaluation and analysis of any EMI risk an ELV mission might face. This group of people concern themselves with practically any form of electromagnetic interference that may risk the safety of a rocket, a mission, or even people. Taking this into consideration, the group investigates natural forms of interference, such as lightning, to manmade interferences, such as antennas.

  20. Groups as units of functional analysis, individuals as proximate mechanisms.

    Science.gov (United States)

    Wilson, David Sloan

    2014-06-01

    Whenever selection operates at a given level of a multitier hierarchy, units at that level should become the object of functional analysis, and units at lower levels should be studied as proximate mechanisms. This intuition already exists for the study of genes in individuals, when individuals are the unit of selection. It is only beginning to be applied for the study of individuals in groups, when groups are the unit of selection. Smaldino's target article is an important step in this direction with an emphasis on human cultural evolution, but the same algorithm applies to all multilevel evolutionary processes.

  1. A novel method to prioritize RNAseq data for post-hoc analysis based on absolute changes in transcript abundance.

    Science.gov (United States)

    McNutt, Patrick; Gut, Ian; Hubbard, Kyle; Beske, Phil

    2015-06-01

    The use of fold-change (FC) to prioritize differentially expressed genes (DEGs) for post-hoc characterization is a common technique in the analysis of RNA sequencing datasets. However, the use of FC can overlook certain population of DEGs, such as high copy number transcripts which undergo metabolically expensive changes in expression yet fail to exceed the ratiometric FC cut-off, thereby missing potential important biological information. Here we evaluate an alternative approach to prioritizing RNAseq data based on absolute changes in normalized transcript counts (ΔT) between control and treatment conditions. In five pairwise comparisons with a wide range of effect sizes, rank-ordering of DEGs based on the magnitude of ΔT produced a power curve-like distribution, in which 4.7-5.0% of transcripts were responsible for 36-50% of the cumulative change. Thus, differential gene expression is characterized by the high production-cost expression of a small number of genes (large ΔT genes), while the differential expression of the majority of genes involves a much smaller metabolic investment by the cell. To determine whether the large ΔT datasets are representative of coordinated changes in the transcriptional program, we evaluated large ΔT genes for enrichment of gene ontologies (GOs) and predicted protein interactions. In comparison to randomly selected DEGs, the large ΔT transcripts were significantly enriched for both GOs and predicted protein interactions. Furthermore, enrichments were were consistent with the biological context of each comparison yet distinct from those produced using equal-sized populations of large FC genes, indicating that the large ΔT genes represent an orthagonal transcriptional response. Finally, the composition of the large ΔT gene sets were unique to each pairwise comparison, indicating that they represent coherent and context-specific responses to biological conditions rather than the non-specific upregulation of a family of genes

  2. Paleodietary reconstruction using stable isotopes and abundance analysis of bovids from the Shungura Formation of South Omo, Ethiopia.

    Science.gov (United States)

    Negash, Enquye W; Alemseged, Zeresenay; Wynn, Jonathan G; Bedaso, Zelalem K

    2015-11-01

    Preservation of the stable carbon isotopic composition of fossil tooth enamel enables us to estimate the relative proportion of C3 versus C4 vegetation in an animal's diet, which, combined with analysis of faunal abundance, may provide complementary methods of paleoenvironmental reconstruction. To this end, we analyzed stable carbon isotopic composition (δ(13)C values) of tooth enamel from four bovid tribes (Tragelaphini, Aepycerotini, Reduncini, and Alcelaphini) derived from six members of the Shungura Formation (Members B, C, D, F, G, and L; ages from ca. 2.90-1.05 Ma (millions of years ago) in the Lower Omo Valley of southwestern Ethiopia. The bovids show a wide range of δ(13)C values within taxa and stratigraphic members, as well as temporal changes in the feeding strategies of taxa analyzed throughout the middle to late Pliocene and early Pleistocene. Such variation suggests that the use of actualistic approaches for paleoenvironmental reconstruction may not always be warranted. Alcelaphini was the only taxon analyzed that retained a consistent dietary preference throughout the sequence, with entirely C4-dominated diets. Reduncini had a mixed C3/C4 to C4-dominated diet prior to 2.4 Ma, after which this taxon shifted to a largely C4-dominated diet. Aepycerotini generally showed a mixed C3/C4 diet, with a period of increased C4 diet from 2.5 to 2.3 Ma. Tragelaphini showed a range of mixed C3/C4 diets, with a median value that was briefly nearer the C4 end member from 2.9 to 2.4 Ma but was otherwise towards the C3 end member. These isotopic results, combined with relative abundance data for these bovids, imply that the environment of the Lower Omo Valley consisted of a mosaic of closed woodlands, with riverine forests and open grasslands. However, our data also signify that the overall environment gradually became more open, and that C4 grasses became more dominant. Finally, these results help document the range and extent of environments and potential diets

  3. Globular Cluster Abundances from High-Resolution, Integrated-Light Spectroscopy. II. Expanding the Metallicity Range for Old Clusters and Updated Analysis Techniques

    CERN Document Server

    Colucci, J E; McWilliam, A

    2016-01-01

    We present abundances of globular clusters in the Milky Way and Fornax from integrated light spectra. Our goal is to evaluate the consistency of the integrated light analysis relative to standard abundance analysis for individual stars in those same clusters. This sample includes an updated analysis of 7 clusters from our previous publications and results for 5 new clusters that expand the metallicity range over which our technique has been tested. We find that the [Fe/H] measured from integrated light spectra agrees to $\\sim$0.1 dex for globular clusters with metallicities as high as [Fe/H]=$-0.3$, but the abundances measured for more metal rich clusters may be underestimated. In addition we systematically evaluate the accuracy of abundance ratios, [X/Fe], for Na I, Mg I, Al I, Si I, Ca I, Ti I, Ti II, Sc II, V I, Cr I, Mn I, Co I, Ni I, Cu I, Y II, Zr I, Ba II, La II, Nd II, and Eu II. The elements for which the integrated light analysis gives results that are most similar to analysis of individual stellar ...

  4. Influence of multi-year Bacillus thuringiensis subsp. israelensis on the abundance of B. cereus group populations in Swedish riparian wetland soils

    DEFF Research Database (Denmark)

    Hendriksen, Niels Bohse; Schneider, Salome; Tajrin, Tania;

    Bacillus thuringiensis subsp. israelensis (Bti) is a soil-born bacterium affiliated to the B. cereus group (Bcg, a group including the pathogens B. cereus, B. thuringiensis, and B. anthracis) and used in biocontrol products against nematoceran larvae. However, knowledge is limited on how long...

  5. Berkeley Phylogenomics Group web servers: resources for structural phylogenomic analysis.

    Science.gov (United States)

    Glanville, Jake Gunn; Kirshner, Dan; Krishnamurthy, Nandini; Sjölander, Kimmen

    2007-07-01

    Phylogenomic analysis addresses the limitations of function prediction based on annotation transfer, and has been shown to enable the highest accuracy in prediction of protein molecular function. The Berkeley Phylogenomics Group provides a series of web servers for phylogenomic analysis: classification of sequences to pre-computed families and subfamilies using the PhyloFacts Phylogenomic Encyclopedia, FlowerPower clustering of proteins sharing the same domain architecture, MUSCLE multiple sequence alignment, SATCHMO simultaneous alignment and tree construction and SCI-PHY subfamily identification. The PhyloBuilder web server provides an integrated phylogenomic pipeline starting with a user-supplied protein sequence, proceeding to homolog identification, multiple alignment, phylogenetic tree construction, subfamily identification and structure prediction. The Berkeley Phylogenomics Group resources are available at http://phylogenomics.berkeley.edu.

  6. A note on structured means analysis for a single group

    OpenAIRE

    Beauducel, Andre

    2015-01-01

    The calculation of common factor means in structured means analysis (SMM) is considered. The SMM equations imply that the unique factors are defined as having zero means. It was shown within the one factor solution that this definition implies larger absolute common factor loadings to co-occur with larger absolute expectations of the observed variables in the single group case. This result was illustrated by means of a small simulation study. It is argued that the proportionality of factor lo...

  7. The use of camera traps for estimating jaguar Panthera onca abundance and density using capture/recapture analysis

    OpenAIRE

    Silver, S. C.; Ostro, L. E. T.; Marsh, L. K.; Maffei, L.; Noss, A. J.; Kelly, M J; Wallace, R B.; Gomez, H.; Ayala, G

    2004-01-01

    Across their range jaguars Panthera onca are important conservation icons for several reasons: their important role in ecosystems as top carnivores, their cultural and economic value, and their potential conflicts with livestock. However, jaguars have historically been difficult to monitor. This paper outlines the first application of a systematic camera trapping methodology for abundance estimation of jaguars. The methodology was initially developed to estimate tiger abundance in India. We u...

  8. LACEwING: A New Moving Group Analysis Code

    Science.gov (United States)

    Riedel, Adric R.; Blunt, Sarah C.; Lambrides, Erini L.; Rice, Emily L.; Cruz, Kelle L.; Faherty, Jacqueline K.

    2017-03-01

    We present a new nearby young moving group (NYMG) kinematic membership analysis code, LocAting Constituent mEmbers In Nearby Groups (LACEwING), a new Catalog of Suspected Nearby Young Stars, a new list of bona fide members of moving groups, and a kinematic traceback code. LACEwING is a convergence-style algorithm with carefully vetted membership statistics based on a large numerical simulation of the Solar Neighborhood. Given spatial and kinematic information on stars, LACEwING calculates membership probabilities in 13 NYMGs and three open clusters within 100 pc. In addition to describing the inputs, methods, and products of the code, we provide comparisons of LACEwING to other popular kinematic moving group membership identification codes. As a proof of concept, we use LACEwING to reconsider the membership of 930 stellar systems in the Solar Neighborhood (within 100 pc) that have reported measurable lithium equivalent widths. We quantify the evidence in support of a population of young stars not attached to any NYMGs, which is a possible sign of new as-yet-undiscovered groups or of a field population of young stars.

  9. Phase analysis of sunspot group numbers on both solar hemispheres

    Institute of Scientific and Technical Information of China (English)

    Lin-Hua Deng; Zhong-Quan Qu; Xiao-Li Yan; Kai-Rang Wang

    2013-01-01

    Cross-correlation analysis and wavelet transform methods are proposed to investigate the phase relationship between the monthly sunspot group numbers in the solar northern and southern hemispheres.It is found that (1) the monthly sunspot group numbers in the northern hemisphere begin two months earlier than those in the southern one,which should lead to phase asynchrony between them but with a slight effect; (2) the Schwabe cycle length for the monthly sunspot group numbers in the two hemispheres obviously differs from each other,and the mean Schwabe cycle length of the monthly sunspot group numbers in the northern hemisphere is slightly larger than that in the southern one; (3) the monthly sunspot group numbers in the northern hemisphere precede those in the southern hemisphere during the years of about 1874-1927,after which,the southern hemisphere leads the northern hemisphere in the years 1928-1964,and then the northern hemisphere leads in time till the present.

  10. Uncertainty Analysis of Method-Based Operating Event Groups Ranking

    Directory of Open Access Journals (Sweden)

    Zdenko Šimić

    2014-01-01

    Full Text Available Safe operation and industrial improvements are coming from the technology development and operational experience (OE feedback. A long life span for many industrial facilities makes OE very important. Proper assessment and understanding of OE remains a challenge because of organization system relations, complexity, and number of OE events acquired. One way to improve OE events understanding is to focus their investigation and analyze in detail the most important. The OE ranking method is developed to select the most important events based on the basic event parameters and the analytical hierarchy process applied at the level of event groups. This paper investigates further how uncertainty in the model affects ranking results. An analysis was performed on the set of the two databases from the 20 years of nuclear power plants in France and Germany. From all uncertainties the presented analysis selected ranking indexes as the most relevant for consideration. Here the presented analysis of uncertainty clearly shows that considering uncertainty is important for all results, especially for event groups ranked closely and next to the most important one. Together with the previously performed sensitivity analysis, uncertainty assessment provides additional insights and a better judgment of the event groups’ importance in further detailed investigation.

  11. Examination of bariatric surgery Facebook support groups: a content analysis.

    Science.gov (United States)

    Koball, Afton M; Jester, Dylan J; Domoff, Sarah E; Kallies, Kara J; Grothe, Karen B; Kothari, Shanu N

    2017-08-01

    Support following bariatric surgery is vital to ensure long-term postoperative success. Many individuals undergoing bariatric surgery are turning to online modalities, especially the popular social media platform Facebook, to access support groups and pages. Despite evidence suggesting that the majority of patients considering bariatric surgery are utilizing online groups, little is known about the actual content of these groups. The purpose of the present study was to conduct a content analysis of bariatric surgery support groups and pages on Facebook. Online via Facebook, independent academic medical center, United States. Data from bariatric surgery-related Facebook support groups and pages were extracted over a 1-month period in 2016. Salient content themes (e.g., progress posts, depression content, eating behaviors) were coded reliably (all κ> .70). More than 6,800 posts and replies were coded. Results indicated that seeking recommendations (11%), providing information or recommendations (53%), commenting on changes since surgery (19%), and lending support to other members (32%) were the most common types of posts. Content surrounding anxiety, eating behaviors, depression, body image, weight bias, and alcohol was found less frequently. Online bariatric surgery groups can be used to receive support, celebrate physical and emotional accomplishments, provide anecdotal accounts of the "bariatric lifestyle" for preoperative patients, and comment on challenges with mental health and experiences of weight bias. Providers should become acquainted with the content commonly found in online groups and exercise caution in recommending these platforms to information-seeking patients. Copyright © 2017 American Society for Bariatric Surgery. Published by Elsevier Inc. All rights reserved.

  12. Has Group Work Education Lost Its Social Group Work Essence? A Content Analysis of MSW Course Syllabi in Search of Mutual Aid and Group Conflict Content

    Science.gov (United States)

    Sweifach, Jay Stephen

    2015-01-01

    This article presents the results of a content analysis of MSW group work course syllabi in an effort to better understand the extent to which mutual aid and group conflict, two important dimensions of social group work, are included and featured as prominent elements in MSW-level group work instruction.

  13. Has Group Work Education Lost Its Social Group Work Essence? A Content Analysis of MSW Course Syllabi in Search of Mutual Aid and Group Conflict Content

    Science.gov (United States)

    Sweifach, Jay Stephen

    2015-01-01

    This article presents the results of a content analysis of MSW group work course syllabi in an effort to better understand the extent to which mutual aid and group conflict, two important dimensions of social group work, are included and featured as prominent elements in MSW-level group work instruction.

  14. Quantitative spectroscopy of extreme helium stars Model atmospheres and a non-LTE abundance analysis of BD+10°2179

    Science.gov (United States)

    Kupfer, T.; Przybilla, N.; Heber, U.; Jeffery, C. S.; Behara, N. T.; Butler, K.

    2017-10-01

    Extreme helium stars (EHe stars) are hydrogen-deficient supergiants of spectral type A and B. They are believed to result from mergers in double degenerate systems. In this paper, we present a detailed quantitative non-LTE spectral analysis for BD+10°2179, a prototype of this rare class of stars, using UV-Visual Echelle Spectrograph and Fiber-fed Extended Range Optical Spectrograph spectra covering the range from ∼3100 to 10 000 Å. Atmosphere model computations were improved in two ways. First, since the UV metal line blanketing has a strong impact on the temperature-density stratification, we used the atlas12 code. Additionally, We tested atlas12 against the benchmark code sterne3, and found only small differences in the temperature and density stratifications, and good agreement with the spectral energy distributions. Secondly, 12 chemical species were treated in non-LTE. Pronounced non-LTE effects occur in individual spectral lines but, for the majority, the effects are moderate to small. The spectroscopic parameters give Teff =17 300±300 K and log g = 2.80±0.10, and an evolutionary mass of 0.55±0.05 M⊙. The star is thus slightly hotter, more compact and less massive than found in previous studies. The kinematic properties imply a thick-disc membership, which is consistent with the metallicity [Fe/H] ≈ -1 and α-enhancement. The refined light-element abundances are consistent with the white dwarf merger scenario. We further discuss the observed helium spectrum in an appendix, detecting dipole-allowed transitions from about 150 multiplets plus the most comprehensive set of known/predicted isolated forbidden components to date. Moreover, a so far unreported series of pronounced forbidden He I components is detected in the optical-UV.

  15. Proteomic analysis of the excretory-secretory products from larval stages of Ascaris suum reveals high abundance of glycosyl hydrolases.

    Directory of Open Access Journals (Sweden)

    Tao Wang

    Full Text Available BACKGROUND: Ascaris lumbricoides and Ascaris suum are socioeconomically important and widespread parasites of humans and pigs, respectively. The excretory-secretory (ES molecules produced and presented at the parasite-host interface during the different phases of tissue invasion and migration are likely to play critical roles in the induction and development of protective immune and other host responses. METHODOLOGY/PRINCIPAL FINDINGS: The aim of this study was to identify the ES proteins of the different larval stages (L3-egg, L3-lung and L4 by LC-MS/MS. In total, 106 different proteins were identified, 20 in L3-egg, 45 in L3-lung stage and 58 in L4. Although most of the proteins identified were stage-specific, 15 were identified in the ES products of at least two stages. Two proteins, i.e. a 14-3-3-like protein and a serpin-like protein, were present in the ES products from the three different larval stages investigated. Interestingly, a comparison of ES products from L4 with those of L3-egg and L3-lung showed an abundance of metabolic enzymes, particularly glycosyl hydrolases. Further study indicated that most of these glycolytic enzymes were transcriptionally upregulated from L4 onwards, with a peak in the adult stage, particularly in intestinal tissue. This was also confirmed by enzymatic assays, showing the highest glycosidase activity in protein extracts from adult worms gut. CONCLUSIONS/SIGNIFICANCE: The present proteomic analysis provides important information on the host-parasite interaction and the biology of the migratory stages of A. suum. In particular, the high transcriptional upregulation of glycosyl hydrolases from the L4 stage onwards reveals that the degradation of complex carbohydrates forms an essential part of the energy metabolism of this parasite once it establishes in the small intestine.

  16. Tree species diversity influences herbivore abundance and damage: meta-analysis of long-term forest experiments.

    Science.gov (United States)

    Vehviläinen, Harri; Koricheva, Julia; Ruohomäki, Kai

    2007-05-01

    Plant monocultures are commonly believed to be more susceptible to herbivore attacks than stands composed of several plant species. However, few studies have experimentally tested the effects of tree species diversity on herbivory. In this paper, we present a meta-analysis of uniformly collected data on insect herbivore abundance and damage on three tree species (silver birch, black alder and sessile oak) from seven long-term forest diversity experiments in boreal and temperate forest zones. Our aim was to compare the effects of forest diversity on herbivores belonging to different feeding guilds and inhabiting different tree species. At the same time we also examined the variation in herbivore responses due to tree age and sampling period within the season, the effects of experimental design (plot size and planting density) and the stability of herbivore responses over time. Herbivore responses varied significantly both among insect feeding guilds and among host tree species. Among insect feeding guilds, only leaf miner densities were consistently lower and less variable in mixed stands as compared to tree monocultures regardless of the host tree species. The responses of other herbivores to forest diversity depended largely on host tree species. Insect herbivory on birch was significantly lower in mixtures than in birch monocultures, whereas insect herbivory on oak and alder was higher in mixtures than in oak and alder monocultures. The effects of tree species diversity were also more pronounced in older trees, in the earlier part of the season, at larger plots and at lower planting density. Overall our results demonstrate that forest diversity does not generally and uniformly reduce insect herbivory and suggest instead that insect herbivore responses to forest diversity are highly variable and strongly dependent on the host tree species and other stand characteristics as well as on the type of the herbivore.

  17. Globular Cluster Abundances from High-resolution, Integrated-light Spectroscopy. II. Expanding the Metallicity Range for Old Clusters and Updated Analysis Techniques

    Science.gov (United States)

    Colucci, Janet E.; Bernstein, Rebecca A.; McWilliam, Andrew

    2017-01-01

    We present abundances of globular clusters (GCs) in the Milky Way and Fornax from integrated-light (IL) spectra. Our goal is to evaluate the consistency of the IL analysis relative to standard abundance analysis for individual stars in those same clusters. This sample includes an updated analysis of seven clusters from our previous publications and results for five new clusters that expand the metallicity range over which our technique has been tested. We find that the [Fe/H] measured from IL spectra agrees to ∼0.1 dex for GCs with metallicities as high as [Fe/H] = ‑0.3, but the abundances measured for more metal-rich clusters may be underestimated. In addition we systematically evaluate the accuracy of abundance ratios, [X/Fe], for Na i, Mg i, Al i, Si i, Ca i, Ti i, Ti ii, Sc ii, V i, Cr i, Mn i, Co i, Ni i, Cu i, Y ii, Zr i, Ba ii, La ii, Nd ii, and Eu ii. The elements for which the IL analysis gives results that are most similar to analysis of individual stellar spectra are Fe i, Ca i, Si i, Ni i, and Ba ii. The elements that show the greatest differences include Mg i and Zr i. Some elements show good agreement only over a limited range in metallicity. More stellar abundance data in these clusters would enable more complete evaluation of the IL results for other important elements. This paper includes data gathered with the 6.5 m Magellan Telescopes located at Las Campanas Observatory, Chile.

  18. The CesA gene family of barley. Quantitative analysis of transcripts reveals two groups of co-expressed genes.

    Science.gov (United States)

    Burton, Rachel A; Shirley, Neil J; King, Brendon J; Harvey, Andrew J; Fincher, Geoffrey B

    2004-01-01

    Sequence data from cDNA and genomic clones, coupled with analyses of expressed sequence tag databases, indicate that the CesA (cellulose synthase) gene family from barley (Hordeum vulgare) has at least eight members, which are distributed across the genome. Quantitative polymerase chain reaction has been used to determine the relative abundance of mRNA transcripts for individual HvCesA genes in vegetative and floral tissues, at different stages of development. To ensure accurate expression profiling, geometric averaging of multiple internal control gene transcripts has been applied for the normalization of transcript abundance. Total HvCesA mRNA levels are highest in coleoptiles, roots, and stems and much lower in floral tissues, early developing grain, and in the elongation zone of leaves. In most tissues, HvCesA1, HvCesA2, and HvCesA6 predominate, and their relative abundance is very similar; these genes appear to be coordinately transcribed. A second group, comprising HvCesA4, HvCesA7, and HvCesA8, also appears to be coordinately transcribed, most obviously in maturing stem and root tissues. The HvCesA3 expression pattern does not fall into either of these two groups, and HvCesA5 transcript levels are extremely low in all tissues. Thus, the HvCesA genes fall into two general groups of three genes with respect to mRNA abundance, and the co-expression of the groups identifies their products as candidates for the rosettes that are involved in cellulose biosynthesis at the plasma membrane. Phylogenetic analysis allows the two groups of genes to be linked with orthologous Arabidopsis CesA genes that have been implicated in primary and secondary wall synthesis.

  19. The Penn State - Torun Centre for Astronomy Planet Search stars. II. Lithium abundance analysis of the Red Giant Clump sample

    CERN Document Server

    Adamow, M; Villaver, E; Wolszczan, A; Nowak, G

    2014-01-01

    Using the sample of 348 stars from the PennState-Torun Centre for Astronomy Planet Search, for which uniformly determined atmospheric parameters are available, with chemical abundances and rotational velocities presented here, we investigate various channels of Li enrichment in giants. Our work is based on the HET/HRS spectra. The A(Li) was determined from the 670.8nm line, while we use a more extended set of lines for alpha-elements abundances. In a series of K-S tests, we compare Li-rich giants with other stars in the sample. We also use available IR photometric and kinematical data in search for evidence of mass-loss. We investigate properties of the most Li-abundant giants in more detail by using multi-epoch precise radial velocities. We present Li and alpha-elements abundances, as well as vsini for 348 stars. We detected Li in 92 stars, of which 82 are giants. 11 of them show significant Li abundance A(Li)>1.4 and 7 of them are Li-overabundant objects, according to criterion of A(Li)>1.5 and their locati...

  20. Topological analysis of group fragmentation in multiagent systems

    Science.gov (United States)

    DeLellis, Pietro; Porfiri, Maurizio; Bollt, Erik M.

    2013-02-01

    In social animals, the presence of conflicts of interest or multiple leaders can promote the emergence of two or more subgroups. Such subgroups are easily recognizable by human observers, yet a quantitative and objective measure of group fragmentation is currently lacking. In this paper, we explore the feasibility of detecting group fragmentation by embedding the raw data from the individuals' motions on a low-dimensional manifold and analyzing the topological features of this manifold. To perform the embedding, we employ the isomap algorithm, which is a data-driven machine learning tool extensively used in computer vision. We implement this procedure on a data set generated by a modified à la Vicsek model, where agents are partitioned into two or more subsets and an independent leader is assigned to each subset. The dimensionality of the embedding manifold is shown to be a measure of the number of emerging subgroups in the selected observation window and a cluster analysis is proposed to aid the interpretation of these findings. To explore the feasibility of using this approach to characterize group fragmentation in real time and thus reduce the computational cost in data processing and storage, we propose an interpolation method based on an inverse mapping from the embedding space to the original space. The effectiveness of the interpolation technique is illustrated on a test-bed example with potential impact on the regulation of collective behavior of animal groups using robotic stimuli.

  1. A novel method for collection of soil-emitted nitric oxide (NO) for natural abundance stable N isotope analysis

    Science.gov (United States)

    Yu, Z.; Elliott, E. M.

    2016-12-01

    The global inventory of NO emissions is poorly constrained with a large portion of the uncertainty attributed to soil NO emissions that result from soil abiotic and microbial processes. While natural abundance stable N isotopes (δ15N) in various soil N-containing compounds have proven to be a robust tracer of soil N cycling, soil δ15N-NO is rarely quantified mainly due to the diffuse nature, low concentrations, and high reactivity of soil-emitted NO. Here, we present the development and application of a dynamic flux chamber system capable of simultaneously measuring soil NO fluxes and collecting NO for δ15N-NO measurements. The system couples a widely used flow-through soil chamber with a NO collection train, in which NO can be converted to NO2 through O3 titration in a Teflon reaction coil, followed by NO2 collection in a 20% triethanolamine (TEA) solution as nitrite and nitrate for δ15N analysis using the denitrifier method. The efficiency of NO-NO2 conversion in the reaction coil and the recovery of NO in the TEA solution were determined experimentally and found to be quantitative (>99%) over a 10 to 749 ppbv NO mixing ratio range. An analytical NO tank (δ15N-NO=71.0±0.4‰) was used to calibrate the method for δ15N-NO analysis. The resulting accuracy and precision (1σ) of the method across various environmental conditions were 1.6‰ and 1.2‰, respectively. Using this new method, controlled laboratory incubations have been conducted to characterize NO emissions induced by rewetting of air-dried surface soil sampled from an urban forest. Pulsed NO emissions, up to 30 times higher than maximum soil NO emissions under steady state, were triggered upon the rewetting and lasted for next 36 hours. While the measured δ15N-NO over the course of the NO pulsing ranged from -52.0‰ and -34.6‰, reinforcing the notion that soil δ15N-NO is lower than those of fossil-fuel combustion sources, a transient δ15N-NO shift was captured immediately after the

  2. An Analysis of Interaction Patterns in the Focus Group Interview

    Directory of Open Access Journals (Sweden)

    Gavora Peter

    2015-12-01

    Full Text Available This paper is based on the analysis of a focus group interview of a moderator and a group of undergraduate students on the topic of self-regulation of learning. The purpose of the investigation was to identify interaction patterns that appeared in the talk of participants and the moderator. In the stream of communication two rudimentary interaction patterns were recognized. The first pattern was named the Catalogue. It consists of a sequence of turns of participants who respond to a request of the moderator and who provide their answers, one by one, without reacting on the content of the previous partner(s talk. The other interaction pattern was called the Domino. In this pattern participants respond to each other. The Catalogue pattern prevailed in the interview. Alongside with identification of patterns of interaction the study demonstrated the functions of the common ground and its accomplishment in the talk of the moderator and participants.

  3. Renormalization group analysis of graphene with a supercritical Coulomb impurity

    CERN Document Server

    Nishida, Yusuke

    2016-01-01

    We develop a field theoretical approach to massless Dirac fermions in a supercritical Coulomb potential. By introducing an Aharonov-Bohm solenoid at the potential center, the critical Coulomb charge can be made arbitrarily small for one partial wave sector, where a perturbative renormalization group analysis becomes possible. We show that a scattering amplitude for reflection of particle at the potential center exhibits the renormalization group limit cycle, i.e., log-periodic revolutions as a function of the scattering energy, revealing the emergence of discrete scale invariance. This outcome is further incorporated in computing the induced charge and current densities, which turn out to have power law tails with coefficients log-periodic with respect to the distance from the potential center. Our findings are consistent with the previous prediction obtained by directly solving the Dirac equation and can in principle be realized by graphene experiments with charged impurities.

  4. Future Development Strategies for S Group Based on SWOT Analysis

    Institute of Scientific and Technical Information of China (English)

    Guohui; QI; Ligen; CHEN

    2014-01-01

    In recent years,the real estate development enterprises are facing the gradually increased government’s macro-control,and the increasingly fierce market competition,so it is very imperative to timely adjust and change the enterprises’ development strategies to adapt to the new development situation.With S Group as the study object,we use SWOT analysis to analyze the company’s internal and external environment,study the current situation of the company and the existing problems,and clearly point out the opportunities and challenges facing the company.Finally we put forth some targeted strategic recommendations,in order to provide a reference for the development of S Group.

  5. Renormalization group analysis of graphene with a supercritical Coulomb impurity

    Science.gov (United States)

    Nishida, Yusuke

    2016-08-01

    We develop a field-theoretic approach to massless Dirac fermions in a supercritical Coulomb potential. By introducing an Aharonov-Bohm solenoid at the potential center, the critical Coulomb charge can be made arbitrarily small for one partial-wave sector, where a perturbative renormalization group analysis becomes possible. We show that a scattering amplitude for reflection of particle at the potential center exhibits the renormalization group limit cycle, i.e., log-periodic revolutions as a function of the scattering energy, revealing the emergence of discrete scale invariance. This outcome is further incorporated in computing the induced charge and current densities, which turn out to have power-law tails with coefficients log-periodic with respect to the distance from the potential center. Our findings are consistent with the previous prediction obtained by directly solving the Dirac equation and can in principle be realized by graphene experiments with charged impurities.

  6. Discrete Fourier Analysis and Chebyshev Polynomials with G2 Group

    Directory of Open Access Journals (Sweden)

    Huiyuan Li

    2012-10-01

    Full Text Available The discrete Fourier analysis on the 30°-60°-90° triangle is deduced from the corresponding results on the regular hexagon by considering functions invariant under the group G2, which leads to the definition of four families generalized Chebyshev polynomials. The study of these polynomials leads to a Sturm-Liouville eigenvalue problem that contains two parameters, whose solutions are analogues of the Jacobi polynomials. Under a concept of m-degree and by introducing a new ordering among monomials, these polynomials are shown to share properties of the ordinary orthogonal polynomials. In particular, their common zeros generate cubature rules of Gauss type.

  7. Group analysis of a conformal perfect fluid spacetime

    Science.gov (United States)

    Govinder, K. S.; Hansraj, S.

    2012-04-01

    We find new exact solutions of the Einstein field equations for a perfect fluid metric conformal to a spacetime of type D in the Petrov classification scheme. We analyse the complete system of equations using Lie group analysis. While previous work was confined to conformal factors of the form U = U(t, x), we investigate the complete situation U = U(t, x, y, z) as well as an auxiliary integrability condition. New classes of solutions are generated via the symmetry generators. The resulting solutions are examined for physical plausibility. Expressions for the energy density and pressure are obtained explicitly and empirical results suggest that these dynamical quantities are positive as expected.

  8. Karyomorphometric analysis of Fritillaria montana group in Greece

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    Sofia Samaropoulou

    2016-12-01

    Full Text Available Fritillaria Linnaeus, 1753 (Liliaceae is a genus of geophytes, represented in Greece by 29 taxa. Most of the Greek species are endemic to the country and/or threatened. Although their classical cytotaxonomic studies have already been presented, no karyomorphometric analysis has ever been given. In the present study, the cytological results of Fritillaria montana Hoppe ex W.D.J. Koch, 1832 group, which includes F. epirotica Turrill ex Rix, 1975 and F. montana are statistically evaluated for the first time. Further indices about interchromosomal and intrachromosomal asymmetry are given. A new population of F. epirotica is also investigated, while for F. montana, a diploid individual was found in a known as triploid population. Paired t-tests and PCoA analysis have been applied to compare the two species.

  9. Renormalization group analysis of the gluon mass equation

    CERN Document Server

    Aguilar, A C; Papavassiliou, J

    2014-01-01

    In the present work we carry out a systematic study of the renormalization properties of the integral equation that determines the momentum evolution of the effective gluon mass. A detailed, all-order analysis of the complete kernel appearing in this particular equation reveals that the renormalization procedure may be accomplished through the sole use of ingredients known from the standard perturbative treatment of the theory, with no additional assumptions. However, the subtle interplay of terms operating at the level of the exact equation gets distorted by the approximations usually employed when evaluating the aforementioned kernel. This fact is reflected in the form of the obtained solutions, whose deviations from the correct behavior are best quantified by resorting to appropriately defined renormalization-group invariant quantities. This analysis, in turn, provides a solid guiding principle for improving the form of the kernel, and furnishes a well-defined criterion for discriminating between various p...

  10. Dual Solutions for Nonlinear Flow Using Lie Group Analysis.

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    Muhammad Awais

    Full Text Available `The aim of this analysis is to investigate the existence of the dual solutions for magnetohydrodynamic (MHD flow of an upper-convected Maxwell (UCM fluid over a porous shrinking wall. We have employed the Lie group analysis for the simplification of the nonlinear differential system and computed the absolute invariants explicitly. An efficient numerical technique namely the shooting method has been employed for the constructions of solutions. Dual solutions are computed for velocity profile of an upper-convected Maxwell (UCM fluid flow. Plots reflecting the impact of dual solutions for the variations of Deborah number, Hartman number, wall mass transfer are presented and analyzed. Streamlines are also plotted for the wall mass transfer effects when suction and blowing situations are considered.

  11. Dual Solutions for Nonlinear Flow Using Lie Group Analysis.

    Science.gov (United States)

    Awais, Muhammad; Hayat, Tasawar; Irum, Sania; Saleem, Salman

    2015-01-01

    `The aim of this analysis is to investigate the existence of the dual solutions for magnetohydrodynamic (MHD) flow of an upper-convected Maxwell (UCM) fluid over a porous shrinking wall. We have employed the Lie group analysis for the simplification of the nonlinear differential system and computed the absolute invariants explicitly. An efficient numerical technique namely the shooting method has been employed for the constructions of solutions. Dual solutions are computed for velocity profile of an upper-convected Maxwell (UCM) fluid flow. Plots reflecting the impact of dual solutions for the variations of Deborah number, Hartman number, wall mass transfer are presented and analyzed. Streamlines are also plotted for the wall mass transfer effects when suction and blowing situations are considered.

  12. Abundance of Jackfruit ( Artocarpus heterophyllus) Affects Group Characteristics and Use of Space by Golden-Headed Lion Tamarins ( Leontopithecus chrysomelas) in Cabruca Agroforest

    Science.gov (United States)

    Oliveira, Leonardo C.; Neves, Leonardo G.; Raboy, Becky E.; Dietz, James M.

    2011-08-01

    Cabruca is an agroforest of cacao trees shaded by native forest trees. It is the predominant vegetation type throughout eastern part of the range of the golden-headed lion tamarins, Leontopithecus chrysomelas, an endangered primate endemic to Atlantic Forest. Understanding how lion tamarins use this agroforest is a conservation priority. To address this question, we documented the diet, home range size, group sizes and composition, density, number of litters and body condition of lion tamarins living in cabruca, and other habitats. Jackfruit, Artocarpus heterophyllus, was the most used species used by lion tamarins in cabruca and was widely available and used throughout the year. In cabruca, home range size was the smallest (22-28 ha) and density of lion tamarins was the highest (1.7 ind/ha) reported for the species. Group size averaged 7.4 individuals and was not significantly different among the vegetation types. In cabruca, groups produced one or two litters a year, and all litters were twins. Adult males in cabruca were significantly heavier than males in primary forest. Our study is the first to demonstrate that breeding groups of golden-headed lion tamarins can survive and reproduce entirely within cabruca agroforest. Jackfruit proved to be a keystone resource for lion tamarins in cabruca, and bromeliads were important as an animal prey foraging microhabitat. In cases where cabruca contains concentrated resources, such as jackfruit and bromeliads, lion tamarins may not only survive and reproduce but may fare better than in other forest types, at least for body condition and reproduction.

  13. Renormalization Group Analysis of Weakly Rotating Turbulent Flows

    Institute of Scientific and Technical Information of China (English)

    王晓宏; 周全

    2011-01-01

    Dynamic renormalization group (RNG) analysis is applied to the investigation of the behavior of the infrared limits of weakly rotating turbulence. For turbulent How subject to weak rotation, the anisotropic part in the renormalized propagation is considered to be a perturbation of the isotropic part. Then, with a low-order approximation, the coarsening procedure of RNG transformation is performed. After implementing the coarsening and rescaling procedures, the RNG analysis suggests that the spherically averaged energy spectrum has the scaling behavior E(k) ∝ k11/5 for weakly rotating turbulence. It is also shown that the Coriolis force will disturb the stability of the Kolmogorov -5/3 energy spectrum and will change the scaling behavior even in the case of weak rotation.%Dynamic renormalization group(RNG)analysis is applied to the investigation of the behavior of the infrared limits of weakly rotating turbulence.For turbulent flow subject to weak rotation,the anisotropic part in the renormalized propagation is considered to be a perturbation of the isotropic part.Then,with a low-order approximation,the coarsening procedure of RNG transformation is performed.After implementing the coarsening and rescaling procedures,the RNG analysis suggests that the spherically averaged energy spectrum has the scaling behavior E(k)∝ k-11/5 for weakly rotating turbulence.It is also shown that the Coriolis force will disturb the stability of the Kolmogorov-5/3 energy spectrum and will change the scaling behavior even in the case of weak rotation.

  14. Identifying Type Ia Supernova Mechanisms in Dwarf Spheroidal Galaxies through Analysis of Iron-peak Elemental Abundances

    Science.gov (United States)

    Guo, Rachel; Xie, Justin Long; Kirby, Evan N.

    2017-01-01

    Through the fusion of nucleons to produce elements heavier than hydrogen and helium, stellar nucleosynthesis produces most of the elements in the universe. Such is the case in a supernova explosion, which creates most of the elements on the periodic table—including iron-peak elements, atomic numbers 21 through 30—through nucleosynthesis and ejects them into the interstellar medium. In this study, we determine the best theoretical supernova model appropriate for the stars in the dwarf spheroidal galaxies Sculptor, Fornax, Ursa Minor, and Leo II by calculating the abundances of iron-peak elements in these stars. To determine iron-peak elemental abundances, we compare synthesized spectra with observed spectra from medium-resolution spectroscopy and determine the best-fitting spectrum by way of a chi-squared minimization. Through inspecting the relationship between the iron-peak element abundances and the abundance of iron itself and by comparing them to previously hypothesized supernova model theories, we discover that the near-Chandrasekhar mass “n1” model, as predicted by Seitenzahl et al., most accurately represents the trends and patterns within our data, presenting new insight into Type Ia supernovae mechanisms within the Milky Way and beyond.

  15. COMPARATIVE ANALYSIS OF GROWTH OF RICE VARIETY BY GROUPS

    Directory of Open Access Journals (Sweden)

    Bruyako V. N.

    2016-03-01

    Full Text Available High growth-rate of plantlet is the integral index of intensity of physiological processes at rice and other cultures. 20 typical plantlets from each of two variants were studded (in the distilled water in thermostat at a temperature 29° C by: length of embryonic root and coleoptile. Comparative analysis of trait characterizing the growth rates of rice varieties showed reliable advantage of Russian ones above the Italian and Chinese. Local varieties, regionalized until the year 2000, exceed new ones on this trait. Highest growth rates were characterized by medium grain samples. The white grain and red grain varieties are excelled other groups on the height of plantlet. Analysis rates of height of plantlets in the distinguished groups showed the necessity of prosecution of improvement of the above enumerated signs at the varieties of late term of ripening, long grain, with Waxy gene, colored grain. We recommend to sow this type of varieties on fields with good leveling, because of low speed of growth

  16. Exploring Venus: the Venus Exploration Analysis Group (VEXAG)

    Science.gov (United States)

    Ocampo, A.; Atreya, S.; Thompson, T.; Luhmann, J.; Mackwell, S.; Baines, K.; Cutts, J.; Robinson, J.; Saunders, S.

    In July 2005 NASA s Planetary Division established the Venus Exploration Analysis Group VEXAG http www lpi usra edu vexag in order to engage the scientific community at large in identifying scientific priorities and strategies for the exploration of Venus VEXAG is a community-based forum open to all interested in the exploration of Venus VEXAG was designed to provide scientific input and technology development plans for planning and prioritizing the study of Venus over the next several decades including a Venus surface sample return VEXAG regularly evaluates NASA s Venus exploration goals scientific objectives investigations and critical measurement requirements including the recommendations in the National Research Council Decadal Survey and NASA s Solar System Exploration Strategic Roadmap VEXAG will take into consideration the latest scientific results from ESA s Venus Express mission and the MESSENGER flybys as well as the results anticipated from JAXA s Venus Climate Orbiter together with science community inputs from venues such as the February 13-16 2006 AGU Chapman Conference to identify the scientific priorities and strategies for future NASA Venus exploration VEXAG is composed of two co-chairs Sushil Atreya University of Michigan Ann Arbor and Janet Luhmann University of California Berkeley VEXAG has formed three focus groups in the areas of 1 Planetary Formation and Evolution Surface and Interior Volcanism Geodynamics etc Focus Group Lead Steve Mackwell LPI 2 Atmospheric Evolution Dynamics Meteorology

  17. Long-term Records of Pacific Salmon Abundance From Sediment Core Analysis: Relationships to Past Climatic Change, and Implications for the Future

    Science.gov (United States)

    Finney, B.

    2002-12-01

    The response of Pacific salmon to future climatic change is uncertain, but will have large impacts on the economy, culture and ecology of the North Pacific Rim. Relationships between sockeye salmon populations and climatic change can be determined by analyzing sediment cores from lakes where sockeye return to spawn. Sockeye salmon return to their natal lake system to spawn and subsequently die following 2 - 3 years of feeding in the North Pacific Ocean. Sockeye salmon abundance can be reconstructed from stable nitrogen isotope analysis of lake sediment cores as returning sockeye transport significant quantities of N, relatively enriched in N-15, from the ocean to freshwater systems. Temporal changes in the input of salmon-derived N, and hence salmon abundance, can be quantified through downcore analysis of N isotopes. Reconstructions of sockeye salmon abundance from lakes in several regions of Alaska show similar temporal patterns, with variability occurring on decadal to millennial timescales. Over the past 2000 years, shifts in sockeye salmon abundance far exceed the historical decadal-scale variability. A decline occurred from about 100 BC - 800 AD, but salmon were consistently more abundant 1200 - 1900 AD. Declines since 1900 AD coincide with the period of extensive commercial fishing. Correspondence between these records and paleoclimatic data suggest that changes in salmon abundance are related to large scale climatic changes over the North Pacific. For example, the increase in salmon abundance c.a. 1200 AD corresponds to a period of glacial advance in southern Alaska, and a shift to drier conditions in western North America. Although the regionally coherent patterns in reconstructed salmon abundance are consistent with the hypothesis that climate is an important driver, the relationships do not always follow patterns observed in the 20th century. A main feature of recorded climate variability in this region is the alternation between multi-decade periods of

  18. Renormalization group analysis of the random first-order transition.

    Science.gov (United States)

    Cammarota, Chiara; Biroli, Giulio; Tarzia, Marco; Tarjus, Gilles

    2011-03-18

    We consider the approach describing glass formation in liquids as a progressive trapping in an exponentially large number of metastable states. To go beyond the mean-field setting, we provide a real-space renormalization group (RG) analysis of the associated replica free-energy functional. The present approximation yields in finite dimensions an ideal glass transition similar to that found in the mean field. However, we find that along the RG flow the properties associated with metastable glassy states, such as the configurational entropy, are only defined up to a characteristic length scale that diverges as one approaches the ideal glass transition. The critical exponents characterizing the vicinity of the transition are the usual ones associated with a first-order discontinuity fixed point.

  19. National logistics working groups: A landscape analysis study.

    Science.gov (United States)

    Leab, Dorothy; Schreiber, Benjamin; Kasonde, Musonda; Bessat, Olivia; Bui, Son; Loisel, Carine

    2017-04-19

    Several countries have acknowledged the contributions made by national logistics working groups (NLWG) to ensure equitable access to the expanded program on immunization's (EPI) vaccines against preventable diseases. In order to provide key insights to the United Nations Children's Fund (UNICEF) and the World Health Organization (WHO) supply chain hub - as well as other players, including national EPI - a landscape analysis study was conducted from September 2015 to February 2016. This is a cross-sectional survey taken by 43 countries that combines qualitative and quantitative approaches. Data was collected through a desk review, consultation, interviews, and distance questioning. References and guidance were used to determine and specify the underlying mechanisms of NLWGs. The key findings are:This study has provided a general overview of the status of NLWGs for immunization in various countries. Based on the key insights of the study, technical assistance needs have been identified, and immunization partners will be required to help countries create and reinforce their NLWGs.

  20. Renormalization group analysis of the gluon mass equation

    Science.gov (United States)

    Aguilar, A. C.; Binosi, D.; Papavassiliou, J.

    2014-04-01

    We carry out a systematic study of the renormalization properties of the integral equation that determines the momentum evolution of the effective gluon mass in pure Yang-Mills theory, without quark effects taken into account. A detailed, all-order analysis of the complete kernel appearing in this particular equation, derived in the Landau gauge, reveals that the renormalization procedure may be accomplished through the sole use of ingredients known from the standard perturbative treatment of the theory, with no additional assumptions. However, the subtle interplay of terms operating at the level of the exact equation gets distorted by the approximations usually employed when evaluating the aforementioned kernel. This fact is reflected in the form of the obtained solutions, for which the deviations from the correct behavior are best quantified by resorting to appropriately defined renormalization-group invariant quantities. This analysis, in turn, provides a solid guiding principle for improving the form of the kernel, and furnishes a well-defined criterion for discriminating between various possibilities. Certain renormalization-group inspired Ansätze for the kernel are then proposed, and their numerical implications are explored in detail. One of the solutions obtained fulfills the theoretical expectations to a high degree of accuracy, yielding a gluon mass that is positive definite throughout the entire range of physical momenta, and displays in the ultraviolet the so-called "power-law" running, in agreement with standard arguments based on the operator product expansion. Some of the technical difficulties thwarting a more rigorous determination of the kernel are discussed, and possible future directions are briefly mentioned.

  1. Abundance analysis, spectral variability, and search for the presence of a magnetic field in the typical PGa star HD19400

    CERN Document Server

    Hubrig, S; Gonzalez, J F; Carroll, T A; Ilyin, I; Schöller, M; Drake, N A; Korhonen, H; Briquet, M

    2014-01-01

    The aim of this study is to carry out an abundance determination, to search for spectral variability and for the presence of a weak magnetic field in the typical PGa star HD19400. High-resolution, high signal-to-noise HARPS spectropolarimetric observations of HD19400 were obtained at three different epochs in 2011 and 2013. For the first time, we present abundances of various elements determined using an ATLAS12 model, including the abundances of a number of elements not analysed by previous studies, such as Ne I, Ga II, and Xe II. Several lines of As II are also present in the spectra of HD19400. To study the variability, we compared the behaviour of the line profiles of various elements. We report on the first detection of anomalous shapes of line profiles belonging to Mn and Hg, and the variability of the line profiles belonging to the elements Hg, P, Mn, Fe, and Ga. We suggest that the variability of the line profiles of these elements is caused by their non-uniform surface distribution, similar to the pr...

  2. Discrimination of marine algal taxonomic groups based on fluorescence excitation emission matrix, parallel factor analysis and CHEMTAX

    Institute of Scientific and Technical Information of China (English)

    CHEN Xiaona; SURongguo; BAIYing; SHI Xiaoyong; YANG Rujun

    2014-01-01

    An in vivo three-dimensional fluorescence method for the determination of algae community structure was developed by parallel factor analysis (PARAFAC) and CHEMTAX. The PARAFAC model was applied to fluo-rescence excitation-emission matrix (EEM) of 60 algae species belonging to five divisions and 11 fluorescent components were identified according to the residual sum of squares and specificity of the composition profiles of fluorescent. By the 11 fluorescent components, the algae species at different growth stages were classified correctly at the division level using Bayesian discriminant analysis (BDA). Then the reference fluo-rescent component ratio matrix was constructed for CHEMTAX, and the EEM–PARAFAC–CHEMTAX method was developed to differentiate algae taxonomic groups. The correct discrimination ratios (CDRs) when the fluorometric method was used for single-species samples were 100% at the division level, except for Bacil-lariophyta with a CDR of 95.6%. The CDRs for the mixtures were above 94.0% for the dominant algae species and above 87.0% for the subdominant algae species. However, the CDRs of the subdominant algae species were too low to be unreliable when the relative abundance estimated was less than 15.0%. The fluorometric method was tested using the samples from the Jiaozhou Bay and the mesocosm experiments in the Xiaomai Island Bay in August 2007. The discrimination results of the dominant algae groups agreed with microscopy cell counts, as well as the subdominant algae groups of which the estimated relative abundance was above 15.0%. This technique would be of great aid when low-cost and rapid analysis is needed for samples in a large batch. The fluorometric technique has the ability to correctly identify dominant species with proper abundance both in vivo and in situ.

  3. Qualitative analysis fingertip patterns in ABO blood group

    Directory of Open Access Journals (Sweden)

    S. V. KShirsagar

    2013-05-01

    Full Text Available The inheritance of the dermatoglyphic patterns is polygenic. The genetic basis of the blood group is well established. The correlation between the dermatoglyphic patterns and the ABO blood group is studied by some workers in different populations. In the present study, the correlation between dermatoglyphics and ABO blood group is studied in the Marathwada Region of Maharashtra. The qualitative data included fingertip patterns and three indices. It was observed that, the Arch pattern is more common in blood group O both in male and female. Ulnar loop is most common in the blood group AB. Simple whorl and double loop whorl patterns are less frequent in blood group AB. Accidentals were not recorded in blood group A while blood group O show highest percentage of accidentals. Dankmeijer’s index was highest in blood group AB and lowest in blood group B.

  4. X-ray analysis of the galaxy group UGC03957 beyond R200 with Suzaku

    CERN Document Server

    Thölken, S; Reiprich, T H; Hasenbusch, J

    2016-01-01

    We investigated the gas properties of the galaxy group UGC03957 up to $1.4R_{200} \\approx 1.4$Mpc in four azimuthal directions with the Suzaku satellite and performed a spectral analysis of five Suzaku observations with 138ks good exposure time in total as well as five Chandra snapshot observations for point source detection. We found a temperature drop of a factor of ${\\sim} 3$ from the center to the outskirts which is consistent with previous results for galaxy clusters. The metal abundance profile shows a flat behavior towards large radii which is a hint for galactic winds as the primary ICM enrichment process. The entropy profile is consistent with numerical simulations after applying a gas mass fraction correction. Previous analyses for clusters and groups often showed an entropy flattening or even a drop around ${\\sim} R_{200}$ which can be an indicator for clumping or non-equilibrium states in the outskirts. Such entropy behaviour is absent in UGC03957. The gas mass fraction is well below the cosmic me...

  5. Gaseous abundances in M82

    CERN Document Server

    Ranalli, P; Origlia, L; Maiolino, R; Makishima, K; Ranalli, Piero; Comastri, Andrea; Origlia, Livia; Maiolino, Roberto; Makishima, Kazuo

    2005-01-01

    We present the preliminary analysis of a deep (100ks) XMM-Newton observation of M82. The spatial distribution of the abundances of chemical elements (Fe, O, Ne, Mg, Si, S) is investigated through narrow-band imaging analisys and spatially-resolved spectroscopy. We find that the abundances of alpha-elements follow a bipolar distribution, these elements being more abundant in the gaseous outflow than in the galaxy centre. This behaviour is found to be more marked for lighter elements (O, Ne) than for heavier elements.

  6. I-SG : Interactive Search Grouping - Search result grouping using Independent Component Analysis

    DEFF Research Database (Denmark)

    Lauritsen, Thomas; Kolenda, Thomas

    2002-01-01

    We present a computational simple and efficient approach to unsupervised grouping the search result from any search engine. Along with each group a set of keywords are found to annotate the contents. This approach leads to an interactive search trough a hierarchial structure that is build online....... It is the users task to improve the search, trough expanding the search query using the topic keywords representing the desired groups. In doing so the search engine limits the space of possible search results, virtually moving down in the search hierarchy, and so refines the search....

  7. A genome-wide analysis of small regulatory RNAs in the human pathogen group A Streptococcus.

    Directory of Open Access Journals (Sweden)

    Nataly Perez

    Full Text Available The coordinated regulation of gene expression is essential for pathogens to infect and cause disease. A recently appreciated mechanism of regulation is that afforded by small regulatory RNA (sRNA molecules. Here, we set out to assess the prevalence of sRNAs in the human bacterial pathogen group A Streptococcus (GAS. Genome-wide identification of candidate GAS sRNAs was performed through a tiling Affymetrix microarray approach and identified 40 candidate sRNAs within the M1T1 GAS strain MGAS2221. Together with a previous bioinformatic approach this brings the number of novel candidate sRNAs in GAS to 75, a number that approximates the number of GAS transcription factors. Transcripts were confirmed by Northern blot analysis for 16 of 32 candidate sRNAs tested, and the abundance of several of these sRNAs were shown to be temporally regulated. Six sRNAs were selected for further study and the promoter, transcriptional start site, and Rho-independent terminator identified for each. Significant variation was observed between the six sRNAs with respect to their stability during growth, and with respect to their inter- and/or intra-serotype-specific levels of abundance. To start to assess the contribution of sRNAs to gene regulation in M1T1 GAS we deleted the previously described sRNA PEL from four clinical isolates. Data from genome-wide expression microarray, quantitative RT-PCR, and Western blot analyses are consistent with PEL having no regulatory function in M1T1 GAS. The finding that candidate sRNA molecules are prevalent throughout the GAS genome provides significant impetus to the study of this fundamental gene-regulatory mechanism in an important human pathogen.

  8. Abundance analysis of SDSS J134338.67+484426.6; an extremely metal-poor star from the MARVELS pre-survey

    CERN Document Server

    Rani, A Susmitha; Beers, T C; Fleming, S; Mahadevan, S; Ge, J

    2016-01-01

    We present an elemental-abundance analysis of an extremely metal-poor (EMP; [Fe/H] < -3.0) star, SDSS J134338.67+484426.6, identified during the course of the MARVELS spectroscopic pre-survey of some 20000 stars to identify suitable candidates for exoplanet searches. This star, with an apparent magnitude V = 12.14, is the lowest metallicity star found in the pre-survey, and is one of only ~20 known EMP stars that are this bright or brighter. Our high-resolution spectroscopic analysis shows that this star is a subgiant with [Fe/H] = -3.42, having "normal" carbon and no enhancement of neutron-capture abundances. Strontium is under-abundant, [Sr/Fe] =-0.47, but the derived lower limit on [Sr/Ba] indicates that Sr is likely enhanced relative to Ba. This star belongs to the sparsely populated class of alpha-poor EMP stars that exhibit low ratios of [Mg/Fe], [Si/Fe], and [Ca/Fe] compared to typical halo stars at similar metallicity. The observed variations in radial velocity from several epochs of (low- and high...

  9. Abundance analysis of SDSS J134338.67+484426.6; an extremely metal-poor star from the MARVELS pre-survey

    Science.gov (United States)

    Susmitha Rani, A.; Sivarani, T.; Beers, T. C.; Fleming, S.; Mahadevan, S.; Ge, J.

    2016-05-01

    We present an elemental-abundance analysis of an extremely metal-poor (EMP; [Fe/H] EMP stars that are this bright or brighter. Our high-resolution spectroscopic analysis shows that this star is a subgiant with [Fe/H] = -3.42, having `normal' carbon and no enhancement of neutron-capture abundances. Strontium is underabundant, [Sr/Fe] = -0.47, but the derived lower limit on [Sr/Ba] indicates that Sr is likely enhanced relative to Ba. This star belongs to the sparsely populated class of α-poor EMP stars that exhibit low ratios of [Mg/Fe], [Si/Fe], and [Ca/Fe] compared to typical halo stars at similar metallicity. The observed variations in radial velocity from several epochs of (low- and high-resolution) spectroscopic follow-up indicate that SDSS J134338.67+484426.6 is a possible long-period binary. We also discuss the abundance trends in EMP stars for r-process elements, and compare with other magnesium-poor stars.

  10. Nucleotide sequence analysis of a candidate gene for ataxia-telangiectasia group D (ATDC)

    Energy Technology Data Exchange (ETDEWEB)

    Leonhardt, E.A.; Kapp, L.N.; Young, B.R.; Murnane, J.P. (Univ. of California, San Francisco, CA (United States))

    1994-01-01

    A radioresistant cell clone (1B3) was previously isolated after transfection of an ataxia-telangiectasia (AT) group D cell line with a human cosmid library. A cosmid rescued from the integration site in 1B3 contained human DNA from chromosome position 11q23, the same region shown by both genetic linkage and chromosome transfer to contain the genes for AT complementation groups A/B, C, and D. A gene within the cosmid (ATDC) was found to produce mRNAs of different sizes. A cDNA for one of the most abundant mRNAs (3.0 kb) was isolated from a HeLa cell library. In the present study, the authors sequenced the 3.0-kb cDNA and the surrounding intron DNA in the cosmids. They used polymerase chain reaction, with primers in the introns, to confirm the number of exons and to analyze DNA from AT group D cells for mutations within this gene. Although no mutations were found, they do not rule out the possibility that mutations may be present within the regulatory sequences or coding sequences found in other mRNAs specific for this gene. From the sequence analysis, they found that the ATDC gene product is one of a group of proteins that share multiple zinc finger motifs and an adjacent leucine zipper motif. These proteins have been proposed to form homo- or hetero-dimers involved in nucleic acid binding, consistent with the fact that many of these proteins appear to be transcriptional regulatory factors involved in carcinogenesis and/or differentiation. The likelihood that the ATDC gene product is involved in transcriptional regulation could explain the pleiomorphic characteristics of AT, including abnormal cell cycle regulation. 36 refs., 5 figs., 2 tabs.

  11. High-resolution abundance analysis of red giants in the metal-poor bulge globular cluster HP~1

    CERN Document Server

    Barbuy, B; Vemado, A; Ernandes, H; Ortolani, S; Saviane, I; Bica, E; Minniti, D; Dias, B; Momany, Y; Hill, V; Zoccali, M; Siqueira-Mello, C

    2016-01-01

    The globular cluster HP~1 is projected at only 3.33 degrees from the Galactic center. Together with its distance, this makes it one of the most central globular clusters in the Milky Way. It has a blue horizontal branch (BHB) and a metallicity of [Fe/H]~-1.0. This means that it probably is one of the oldest objects in the Galaxy. Abundance ratios can reveal the nucleosynthesis pattern of the first stars as well as the early chemical enrichment and early formation of stellar populations. High-resolution spectra obtained for six stars were analyzed to derive the abundances of the light elements C, N, O, Na, and Al, the alpha-elements Mg, Si, Ca, and Ti, and the heavy elements Sr, Y , Zr, Ba, La, and Eu.} High-resolution spectra of six red giants that are confirmed members of the bulge globular cluster HP~1 were obtained with the 8m VLT UT2-Kueyen telescope with the UVES spectrograph in FLAMES-UVES configuration. The spectroscopic parameter derivation was based on the excitation and ionization equilibrium of FeI...

  12. Sodium abundances of AGB and RGB stars in galactic globular clusters I. Analysis and results of NGC 2808

    CERN Document Server

    Wang, Y; Charbonnel, C; Van der Swaelmen, M; Bono, G; Chantereau, W; Zhao, G

    2016-01-01

    Galactic globular clusters (GC) are known to have multiple stellar populations and be characterised by similar chemical features, e.g. O-Na anti-correlation. While second-population stars, identified by their Na overabundance, have been found from the main sequence turn-off up to the tip of the red giant branch in various Galactic GCs, asymptotic giant branch (AGB) stars have rarely been targeted. The recent finding that NGC 6752 lacks an Na-rich AGB star has thus triggered new studies on AGB stars in GCs, since this result questions our basic understanding of GC formation and stellar evolution theory. In order to compare the Na abundance distributions of AGB and RGB stars in Galactic GCs and investigate whether the presence of Na-rich stars on the AGB is metallicity-dependent, we obtained the high-resolution spectra with the multi-object high-resolution spectrograph FLAMES on ESO/VLT for a sample of AGB and RGB stars in the Galactic GC NGC 2808. The accurate Na abundances were derived for 31 AGB and 40 RGB s...

  13. Standard test method for isotopic abundance analysis of uranium hexafluoride and uranyl nitrate solutions by multi-collector, inductively coupled plasma-mass spectrometry

    CERN Document Server

    American Society for Testing and Materials. Philadelphia

    2014-01-01

    1.1 This test method covers the isotopic abundance analysis of 234U, 235U, 236U and 238U in samples of hydrolysed uranium hexafluoride (UF6) by inductively coupled plasma source, multicollector, mass spectrometry (ICP-MC-MS). The method applies to material with 235U abundance in the range of 0.2 to 6 % mass. This test method is also described in ASTM STP 1344. 1.2 The values stated in SI units are to be regarded as standard. No other units of measurement are included in this standard. 1.3 This standard does not purport to address all of the safety concerns, if any, associated with its use. It is the responsibility of the user of this standard to establish appropriate safety and health practices and determine the applicability of regulatory limitations prior to use.

  14. Introducing Semantic Cohesion Analysis: A Study of Group Talk.

    Science.gov (United States)

    Friedlander, Myrna L.; And Others

    1985-01-01

    Cohesive talk was observed over time and across psychotherapy groups led by self-disclosing or nondisclosing therapists. Despite individual therapist differences, the nondisclosing groups showed more cohesive interactions throughout therapy. No differences were observed in clients' perceptions of therapists or their attraction to the group.…

  15. Language Ability Groups in Bilingual Children: A Latent Profile Analysis

    Science.gov (United States)

    Kapantzoglou, Maria; Restrepo, M. Adelaida; Gray, Shelley; Thompson, Marilyn S.

    2015-01-01

    Purpose: Classifying children into two language ability groups, with and without language impairment, may underestimate the number of groups with distinct language ability patterns, or, alternatively, there may be only a single group characterized by a continuum of language performance. The purpose of the current study was to identify the number…

  16. Security Analysis of Broadcaster Group Key Exchange Protocols

    Institute of Scientific and Technical Information of China (English)

    LI Li; ZHANG Huanguo

    2006-01-01

    Group key exchange protocols are basic protocols to provide privacy and integrity in secure group communication. This paper discusses the security of one type of group key exchange protocols and defines the kind of protocols as broadcaster group protocols. It points out two attacks on this kind of protocols. The first attack can be avoided by using fresh values in each action during one session of the group protocol. The second attack should be related with concrete application. It also proposes a dynamic key agreement protocol as an example of solutions at the last part of the paper.

  17. An integrative Bayesian Dirichlet-multinomial regression model for the analysis of taxonomic abundances in microbiome data.

    Science.gov (United States)

    Wadsworth, W Duncan; Argiento, Raffaele; Guindani, Michele; Galloway-Pena, Jessica; Shelbourne, Samuel A; Vannucci, Marina

    2017-02-08

    The Human Microbiome has been variously associated with the immune-regulatory mechanisms involved in the prevention or development of many non-infectious human diseases such as autoimmunity, allergy and cancer. Integrative approaches which aim at associating the composition of the human microbiome with other available information, such as clinical covariates and environmental predictors, are paramount to develop a more complete understanding of the role of microbiome in disease development. In this manuscript, we propose a Bayesian Dirichlet-Multinomial regression model which uses spike-and-slab priors for the selection of significant associations between a set of available covariates and taxa from a microbiome abundance table. The approach allows straightforward incorporation of the covariates through a log-linear regression parametrization of the parameters of the Dirichlet-Multinomial likelihood. Inference is conducted through a Markov Chain Monte Carlo algorithm, and selection of the significant covariates is based upon the assessment of posterior probabilities of inclusions and the thresholding of the Bayesian false discovery rate. We design a simulation study to evaluate the performance of the proposed method, and then apply our model on a publicly available dataset obtained from the Human Microbiome Project which associates taxa abundances with KEGG orthology pathways. The method is implemented in specifically developed R code, which has been made publicly available. Our method compares favorably in simulations to several recently proposed approaches for similarly structured data, in terms of increased accuracy and reduced false positive as well as false negative rates. In the application to the data from the Human Microbiome Project, a close evaluation of the biological significance of our findings confirms existing associations in the literature.

  18. In-Depth Global Analysis of Transcript Abundance Levels in Porcine Alveolar Macrophages Following Infection with Porcine Reproductive and Respiratory Syndrome Virus

    Directory of Open Access Journals (Sweden)

    Laura C. Miller

    2010-01-01

    Full Text Available Porcine reproductive and respiratory syndrome virus (PRRSV is a major pathogen of swine worldwide and causes considerable economic loss. Identifying specific cell signaling or activation pathways that associate with variation in PRRSV replication and macrophage function may lead to identification of novel gene targets for the control of PRRSV infection. Serial Analysis of Gene Expression (SAGE was used to create and survey the transcriptome of in vitro mock-infected and PRRSV strain VR-2332-infected porcine alveolar macrophages (PAM at 0, 6, 12, 16, and 24 hours after infection. The transcriptome data indicated changes in transcript abundance occurring in PRRSV-infected PAMs over time after infection with more than 590 unique tags with significantly altered transcript abundance levels identified (P<.01. Strikingly, innate immune genes (whose transcript abundances are typically altered in response to other pathogens or insults including IL-8, CCL4, and IL-1β showed no or very little change at any time point following infection.

  19. Chemical abundance analysis of the Open Clusters Cr110, NGC2099 (M37), NGC2420, NGC7789 and M67 (NGC2682)

    CERN Document Server

    Pancino, E; Rossetti, E; Gallart, C

    2009-01-01

    (Abridged) The present number of Galactic Open Clusters that have high-resolution abundance determinations, not only of [Fe/H], but also of other key elements, is largely insufficient to enable a clear modeling of the Galactic Disk chemical evolution. We obtained high-resolution (R~30000), high quality (S/N~50-100 per pixel), echelle spectra with FOCES, at Calar Alto, for 3 red clump stars in each of five Open Clusters. We used the classical Equivalent Width analysis method to obtain accurate abundances of 16 elements. We also derived the oxygen abundance through spectral synthesis of the 6300A forbidden line. Three of the clusters were never studied previously with high-resolution: we found [Fe/H]=+0.03 +/- 0.02 dex for Cr110; [Fe/H]=+0.01 +/- 0.05 dex for NGC2099 (M37) and [Fe/H]=-0.05 +/- 0.03 dex for NGC2420. For the remaining clusters, we find: [Fe/H]=+0.05 +/- 0.02 dex for M67 and [Fe/H]=+0.04 +/- 0.07 dex for NGC7789. We provide the first high-resolution based velocity estimate for Cr110, V=41.0 +/- 3....

  20. Content analysis of neurodegenerative and mental diseases social groups.

    Science.gov (United States)

    Martínez-Pérez, Borja; de la Torre-Díez, Isabel; Bargiela-Flórez, Beatriz; López-Coronado, Miguel; Rodrigues, Joel J P C

    2015-12-01

    This article aims to characterize the different types of Facebook and Twitter groups for different mental diseases, their purposes, and their functions. We focused the search on depressive disorders, dementia, and Alzheimer's and Parkinson's diseases and examined the Facebook (www.facebook.com) and Twitter (www.twitter.com) groups. We used four assessment criteria: (1) purpose, (2) type of creator, (3) telehealth content, and (4) free-text responses in surveys and interviews. We observed a total of 357 Parkinson groups, 325 dementia groups, 853 Alzheimer groups, and 1127 depression groups on Facebook and Twitter. Moreover, we analyze the responses provided by different users. The survey and interview responses showed that many people were interested in using social networks to support and help in the fight against these diseases. The results indicate that social networks are acceptable by users in terms of simplicity and utility. People use them for finding support, information, self-help, advocacy and awareness, and for collecting funds.

  1. Systematic analysis of group identification in stock markets

    OpenAIRE

    Dong-Hee Kim; Hawoong Jeong

    2005-01-01

    We propose improved methods to identify stock groups using the correlation matrix of stock price changes. By filtering out the marketwide effect and the random noise, we construct the correlation matrix of stock groups in which nontrivial high correlations between stocks are found. Using the filtered correlation matrix, we successfully identify the multiple stock groups without any extra knowledge of the stocks by the optimization of the matrix representation and the percolation approach to t...

  2. Systematic analysis of group identification in stock markets.

    Science.gov (United States)

    Kim, Dong-Hee; Jeong, Hawoong

    2005-10-01

    We propose improved methods to identify stock groups using the correlation matrix of stock price changes. By filtering out the market-wide effect and the random noise, we construct the correlation matrix of stock groups in which nontrivial high correlations between stocks are found. Using the filtered correlation matrix, we successfully identify the multiple stock groups without any extra knowledge of the stocks by the optimization of the matrix representation and the percolation approach to the correlation-based network of stocks. These methods drastically reduce the ambiguities while finding stock groups using the eigenvectors of the correlation matrix.

  3. Raccoon abundance inventory report

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — This report summarizes the results of a raccoon abundance inventory on Clarence Cannon National Wildlife Refuge in 2012. Determining raccoon abundance allows for...

  4. Galaxy groups in the 2dF galaxy redshift survey A Compactness Analysis of Groups

    CERN Document Server

    Zandivarez, A A; Ragone, C J; Muriel, H; Martínez, H J

    2002-01-01

    A comprehensive study on compactness has been carried out on the 2dF Galaxy Group Catalogue constructed by Merch\\'an & Zandivarez. The compactness indexes defined in this work take into account different geometrical constraints in order to explore a wide range of possibilities. Our results show that there is no clear distinction between groups with high and low level of compactness when considering particular properties as the radial velocity dispersion, the relative fraction of galaxies per spectral type and luminosity functions of their galaxy members. Studying the trend of the fraction of galaxies per spectral type as a function of the dimensionless crossing time some signs of dynamical evolution are observed. From the comparison with previous works on compactness we realize that special care should be taken into account for some compactness criteria definitions in order to avoid possible biases in the identification.

  5. Infinite dimensional spherical analysis and harmonic analysis for groups acting on homogeneous trees

    DEFF Research Database (Denmark)

    Axelgaard, Emil

    of the groups, the so-called irreducible tame representations. We prove the existence of irreducible non-tame representations by constructing a compactification of the boundary of the tree - an object which until now has not played any role in the analysis of automorphism groups for trees which are not locally......In this thesis, we study groups of automorphisms for homogeneous trees of countable degree by using an inductive limit approach. The main focus is the thourough discussion of two Olshanski spherical pairs consisting of automorphism groups for a homogeneous tree and a homogeneous rooted tree...... finite. Finally, we discuss conditionally positive definite functions on the groups and use the generalized Bochner-Godement theorem for Olshanski spherical pairs to prove Levy-Khinchine formulas for both of the considered pairs....

  6. Brief Analysis of Group Structure in the Language Classroom

    Institute of Scientific and Technical Information of China (English)

    赵丹晨

    2013-01-01

    Group activities are commonly used in second language classroom in recent years mostly because they encourage stu⁃dents to work together, helping each other. However, it is of great importance for teachers to notice the group structures so that this class activity could play its important role in the classroom.

  7. Analysis of Conceptualization Patterns across Groups of People

    DEFF Research Database (Denmark)

    Glückstad, Fumiko Kano; Herlau, Tue; Schmidt, Mikkel Nørgaard

    2013-01-01

    This paper analyzes patterns of conceptualizations possessed by different groups of subjects. The eventual goal of this work is to dynamically learn and structure semantic representations for groups of people sharing domain knowledge. In this paper, we conduct a survey for collecting data...

  8. Ability Grouping in Schools: An Analysis of Effects.

    Science.gov (United States)

    Ireson, Judith; Hallam, Susan; Mortimore, Peter; Hack, Sarah; Clark, Helen

    This paper presents preliminary findings from a large-scale study of ability grouping in English secondary schools. Forty-five secondary schools representing three levels of grouping took part in the research. Within these schools, data have been collected from a cohort of Year 9 pupils, aged 13-14 years. All these pupils took tests in English,…

  9. Business group performance, context, and strategy: A meta-analysis

    NARCIS (Netherlands)

    M. Carney (Michael); E.R. Gedajlovic (Eric); P.P.M.A.R. Heugens (Pursey); M. van Essen (Marc); J. van Oosterhout (Hans)

    2010-01-01

    textabstractResearch on business groups ?legally independent firms tied together in a variety of formal and informal ways ?is accelerating, but four questions still lack a definitive answer: Does business group membership enhance or diminish firm performance? Are members comparatively better off in

  10. Analysis of a Group Decision-Making Process

    Directory of Open Access Journals (Sweden)

    Gabriela GHEORGHE

    2010-08-01

    Full Text Available The aim of this paper is to highlight the role of group decision and group thinking in the organization of a firm, taking as reference theoretical models and their practical applications. Organizational goals are often blocked by a pattern of thinking that develops within organizations. The article will also underline the importance oforganizations' focusing on sub-goals, in order to reach, finally, to the desired result in the main goals of the organization.

  11. Analysis of a Group Decision-Making Process

    OpenAIRE

    Gabriela GHEORGHE

    2010-01-01

    The aim of this paper is to highlight the role of group decision and group thinking in the organization of a firm, taking as reference theoretical models and their practical applications. Organizational goals are often blocked by a pattern of thinking that develops within organizations. The article will also underline the importance of organizations' focusing on sub-goals, in order to reach, finally, to the desired result in the main goals of the organization.

  12. “Prometheus” in group analysis: a reinterpretation of the mythological Foulkesian concept of “group matrix”

    Directory of Open Access Journals (Sweden)

    Giuseppe Nucara

    2012-12-01

    Full Text Available In this paper we made an analysis of Foulkesian group-analytic the concept of matrix using as a privileged vertex of observation the greek myth of Prometheus. The narrative structureof this myth is then described and analyzed in its symbolic capacity to represent the complex and psychoanthropological concept of neoteny and its deep relationship with the concepts of culture and of founding group-analytical matrix (neotenic matrix.

  13. Entrepreneurial networking differences: An ethnic in-group and out-group analysis

    Directory of Open Access Journals (Sweden)

    Boris Urban

    2011-03-01

    Full Text Available Orientation: Researching entrepreneurship using a network perspective is important, as social networks are assets for small business owners struggling to survive in competitive markets.Research purpose: The research question of this study has focused on what we can learn about entrepreneurial networking, considering that there is an under-explored and unarticulated set of networking principles and practices which have not been previously analysed in terms of a multiethnic country context.Motivation for the study: Often the lack of network use is reported as a feature of entrepreneurs, who have less opportunity to utilise formal social capital features. Social networks provided by extended family, community-based or organisational relationships are often theorised to supplement the effects of education, experience and financial capital.Research design, approach and method: Based on hypothesised differences in networking ties, network assistance and support relationships, a survey was used to collect data on quantitative measures. Descriptive statistics were calculated and differential tests were conducted to test the hypotheses.Main findings: Results indicate that entrepreneurial networking is largely independent on group composition. Generally at least some aspects of networking are generic and as a consequence, a more integrated view of networking can be adopted.Practical/managerial implications: The practical value of the present study points to several areas of interest to entrepreneurs, policy makers and educators, through demonstrating the multifaceted nature of entrepreneurial networks for different groups and their explanatory potential in understanding networking.Contribution/value-add: Despite the importance of entrepreneurial networking, little empirical or theoretical research has examined the dynamics of networking in a developing country context such as South Africa, which has lower than expected total entrepreneurship activity.

  14. 24 Y-chromosomal STR haplotypic polymorphisms for Chinese Uygur ethnic group and its phylogenic analysis with other Chinese groups.

    Science.gov (United States)

    Liu, Wen-Juan; Pu, Hong-Wei; Yang, Chun-Hua; Meng, Hao-Tian; Zhang, Yu-Dang; Zhang, Li-Ping; Yan, Jiang-Wei; Wang, Hong-Dan; Ren, Jian-Wen; Sun, Jun-Yi; Liu, Chao; Wang, Hui; Zhu, Bo-Feng

    2015-02-01

    The Uygur ethnic minority is the largest ethnic group in the Xinjiang Uygur Autonomous Region of China, and is a precious resource for the study of ethnogeny and forensic biology. Previous studies have focused on the genetic background of the Uygur group, however, the patrilineal descent of the group is still unclear. In this study, we investigated the genetic diversity of 24 Y-STR loci in the Uygur group and analyzed the population differentiations as well as the genetic relationships between the Uygur group and other previously reported populations using 17 Y-filer loci. According to haplotypic analysis of the 24 Y-STR loci in 109 Uygur individuals, 104 different haplotypes were obtained, 99 of which were unique. The haplotypic diversity and discrimination capacity of these 24 Y-STR loci in Uygur group were 0.9992 and 0.9541, respectively. An additional 7 loci (DYS388, DYS444, DYS447, DYS449, DYS522, and DYS527a,b) showed high genetic diversity and improved the overall discrimination capacity of the 24 Y-STR system. Pairwise Fst and neighbor-joining analysis showed that the Uygur group was genetically close to the Han populations from different regions. © 2014 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

  15. Analysis of a herpetofaunal community from an altered marshy area in Sicily; with special remarks on habitat use (niche breadth and overlap), relative abundance of lizards and snakes, and the correlation between predator abundance and tail loss in lizards

    NARCIS (Netherlands)

    Luiselli, L.; Angelici, F.M.; Di Vittorio, M.; Spinnato, A.; Politano, E.

    2005-01-01

    A field survey was conducted in a highly degraded barren environment in Sicily in order to investigate herpetofaunal community composition and structure, habitat use (niche breadth and overlap) and relative abundance of a snake predator and two species of lizard prey. The site was chosen because it

  16. 3D Assembly Group Analysis for Cognitive Automation

    Directory of Open Access Journals (Sweden)

    Christian Brecher

    2012-01-01

    Full Text Available A concept that allows the cognitive automation of robotic assembly processes is introduced. An assembly cell comprised of two robots was designed to verify the concept. For the purpose of validation a customer-defined part group consisting of Hubelino bricks is assembled. One of the key aspects for this process is the verification of the assembly group. Hence a software component was designed that utilizes the Microsoft Kinect to perceive both depth and color data in the assembly area. This information is used to determine the current state of the assembly group and is compared to a CAD model for validation purposes. In order to efficiently resolve erroneous situations, the results are interactively accessible to a human expert. The implications for an industrial application are demonstrated by transferring the developed concepts to an assembly scenario for switch-cabinet systems.

  17. STRUCTURAL ANALYSIS AND ENVIRONMENTAL STABILITY OF POLYFLUORINATED GROUP SUBSTITUTED POLYTHIOPHENES

    Institute of Scientific and Technical Information of China (English)

    ZHANG Xuqing; SHEN Xueming; YANG Shiyong; LU Wei; ZHANG Jingyun

    1996-01-01

    Electrochemical polymerization of 3-fluoroalkoxy and 3-fluoroether thiophenes gives polymers with relatively high molecular weights and good processibility . Investigation of these polymers by means of GPC indicates that an increase in the number of fluorine atoms in the fluorinated group results in a decrease in degree of polymerization of the polymers in the same polythiophene series. As shown by NMR and FTIR, the polyfluorinated group substituted polythiophenes have regular 2, 5-coupling in their main chains.The SEM micrographs of the polymer films exhibit that polymer (1)-poly [3-2, 2, 3, 3-tetrafluoro-propoxy) thiophene] possesses more regular structure than the other polymers do. Substitution of polythiophenes by fluorinated groups leads to the polymers with high electric, electrochemical and thermal stability.

  18. Combining Phytate/Ca2+Fractionation with Trichloroacetic Acid/Acetone Precipitation Improved Separation of Low-Abundant Proteins of Wheat (Triticum aestivum L.) Leaf for Proteomic Analysis

    Institute of Scientific and Technical Information of China (English)

    Muhammad A R F Sultan; LIU Hui; CHENG Yu-Feng; ZHANG Pei-pei; ZHAO Hui-xian

    2013-01-01

    Proteomic assessment of low-abundance leaf proteins is hindered by the large quantity of ribulose-1,5-bisphosphate carboxylase/oxygenase (Rubisco) present within plant leaf tissues. In the present study, total proteins were extracted from wheat (Triticum aestivum L.) leaves by a conventional trichloroacetic acid (TCA)/acetone method and a protocol first developed in this work. Phytate/Ca2+fractionation and TCA/acetone precipitation were combined to design an improved TCA/acetone method. The extracted proteins were analysed by two-dimensional gel electrophoresis (2-DE). The resulting 2-DE images were compared to reveal major differences. The results showed that large quantities of Rubisco were deleted from wheat leaf proteins prepared by the improved method. As many as (758±4) protein spots were detected from 2-DE images of protein extracts obtained by the improved method, 130 more than those detected by the TCA/acetone method. Further analysis indicated that more protein spots could be detected at regions of pI 4.00-4.99 and 6.50-7.00 in the improved method-based 2-DE images. Our findings indicated that the improved method is an efficient protein preparation protocol for separating low-abundance proteins in wheat leaf tissues by 2-DE analysis. The proposed protocol is simple, fast, inexpensive and also applicable to protein preparations of other plants.

  19. Abundances of neutron-capture elements in G 24-25

    DEFF Research Database (Denmark)

    Liu, S.; Nissen, Poul Erik; Schuster, W. J.

    2012-01-01

    Aims. The differences between the neutron-capture element abundances of halo stars are important to our understanding of the nucleosynthesis of elements heavier than the iron group. We present a detailed abundance analysis of carbon and twelve neutron-capture elements from Sr up to Pb...... overabundances of carbon and heavy s-process elements and mild overabundances of Eu and light s-process elements. This abundance distribution is consistent with that of a typical CH giant. The abundance pattern can be explained by mass transfer from a former asymptotic giant branch component, which is now...

  20. Abundances of neutron-capture elements in G 24-25

    DEFF Research Database (Denmark)

    Liu, S.; Nissen, Poul Erik; Schuster, W. J.

    2012-01-01

    Aims. The differences between the neutron-capture element abundances of halo stars are important to our understanding of the nucleosynthesis of elements heavier than the iron group. We present a detailed abundance analysis of carbon and twelve neutron-capture elements from Sr up to Pb...... overabundances of carbon and heavy s-process elements and mild overabundances of Eu and light s-process elements. This abundance distribution is consistent with that of a typical CH giant. The abundance pattern can be explained by mass transfer from a former asymptotic giant branch component, which is now...

  1. Invasive Group A Streptococcal Disease. National Epidemiology and Genetic Analysis

    NARCIS (Netherlands)

    Vlaminckx, B.J.M.

    2006-01-01

    Infections with group A streptococci (GAS), or S. pyogenes, range from mild and superficial to very severe and lethal invasive disease. In severe invasive GAS infections, hypotension and multiorgan failure may develop rapidly resulting in the development of toxic shock-like syndrome (TSS). In the

  2. Multi-modal analysis of small-group conversational dynamics

    NARCIS (Netherlands)

    Akker, op den Rieks; Gatica-Perez, Daniel; Heylen, Dirk; Renals, Steve; Bourlard, Hervé; Carletta, Jean; Popescu-Belis, Andrei

    2012-01-01

    This chapter provides an overview of the basic problems realted to automatic understanding of conversational group dynamics. It provides an overview of current research in automatic detection of the addressee(s) of the speaker in multiparty conversations, the visual focus of attention of participant

  3. Time Analysis Of King Matthias the Ist Sculptural Group

    Directory of Open Access Journals (Sweden)

    Julieta Daniela CHELARU

    2010-06-01

    Full Text Available The paper presents a study on the degradation of the King Matthias I sculptural group, caused by environment factors and influenced by the casting technology and by the assembling method. During this study, samples from inside the statue were used and analyzed, using microscopy and X ray diffraction.

  4. Contingency Response Groups: An Analysis of Maintenance Training

    Science.gov (United States)

    2011-06-01

    understanding through the multiple TDYs and the demands of the ASAM program. Thank you for your encouragement and motivation. vi...Advanced Study of Air Mobility ( ASAM )__________________ Status: [X ] Student [ ] Faculty [ ] Staff [ ] Other Optimal Media Outlet...www.heritageflightacademy.com/americanairman/apcourse.html>. Carrabba, Peter. "Contingency Response Group Topics for ASAM ." Expeditionary Center, McGuire AFB, NJ. May 2010

  5. Invasive Group A Streptococcal Disease. National Epidemiology and Genetic Analysis

    NARCIS (Netherlands)

    Vlaminckx, B.J.M.

    2006-01-01

    Infections with group A streptococci (GAS), or S. pyogenes, range from mild and superficial to very severe and lethal invasive disease. In severe invasive GAS infections, hypotension and multiorgan failure may develop rapidly resulting in the development of toxic shock-like syndrome (TSS). In the no

  6. Phylogenetic Analysis of Viridans Group Streptococci Causing Endocarditis ▿

    Science.gov (United States)

    Simmon, Keith E.; Hall, Lori; Woods, Christopher W.; Marco, Francesc; Miro, Jose M.; Cabell, Christopher; Hoen, Bruno; Marin, Mercedes; Utili, Riccardo; Giannitsioti, Efthymia; Doco-Lecompte, Thanh; Bradley, Suzanne; Mirrett, Stanley; Tambic, Arjana; Ryan, Suzanne; Gordon, David; Jones, Phillip; Korman, Tony; Wray, Dannah; Reller, L. Barth; Tripodi, Marie-Francoise; Plesiat, Patrick; Morris, Arthur J.; Lang, Selwyn; Murdoch, David R.; Petti, Cathy A.

    2008-01-01

    Identification of viridans group streptococci (VGS) to the species level is difficult because VGS exchange genetic material. We performed multilocus DNA target sequencing to assess phylogenetic concordance of VGS for a well-defined clinical syndrome. The hierarchy of sequence data was often discordant, underscoring the importance of establishing biological relevance for finer phylogenetic distinctions. PMID:18650347

  7. Phylogenetic analysis of viridans group streptococci causing endocarditis.

    Science.gov (United States)

    Simmon, Keith E; Hall, Lori; Woods, Christopher W; Marco, Francesc; Miro, Jose M; Cabell, Christopher; Hoen, Bruno; Marin, Mercedes; Utili, Riccardo; Giannitsioti, Efthymia; Doco-Lecompte, Thanh; Bradley, Suzanne; Mirrett, Stanley; Tambic, Arjana; Ryan, Suzanne; Gordon, David; Jones, Phillip; Korman, Tony; Wray, Dannah; Reller, L Barth; Tripodi, Marie-Francoise; Plesiat, Patrick; Morris, Arthur J; Lang, Selwyn; Murdoch, David R; Petti, Cathy A

    2008-09-01

    Identification of viridans group streptococci (VGS) to the species level is difficult because VGS exchange genetic material. We performed multilocus DNA target sequencing to assess phylogenetic concordance of VGS for a well-defined clinical syndrome. The hierarchy of sequence data was often discordant, underscoring the importance of establishing biological relevance for finer phylogenetic distinctions.

  8. Analysis of the factors that affect the distribution and abundance of three Neobuxbaumia species (Cactaceae) that differ in their degree of rarity

    Science.gov (United States)

    Ruedas, Marcela; Valverde, Teresa; Zavala-Hurtado, José Alejandro

    2006-03-01

    We studied three species of columnar cacti in the genus Neobuxbaumia which differ in their degree of rarity: Neobuxbaumia macrocephala (the rarest), Neobuxbaumia tetetzo (intermediate), and Neobuxbaumia mezcalaensis (the most common). To investigate the ecological factors that limit their distribution and abundance, we surveyed 80 localities within the region of Tehuacan-Cuicatlán, in Central Mexico. At each locality we measured several environmental variables, and the density of the Neobuxbaumia populations present. We used a principal component analysis (PCA) to identify the factors that are associated to the presence/absence of each species. Additionally, we carried out multiple regressions between environmental variables and population density to test whether the variation in these variables was related to changes in abundance. The results show that factors significantly affecting the distribution of these species are mean annual temperature, altitude, rainfall, and soil properties such as texture and organic matter content. N. mezcalaensis reaches maximum population densities of 14,740 plants per ha (average density = 3943 plants per ha) and is associated with localities with relatively abundant rainfall. N. tetetzo shows maximum population densities of 14,060 plants per ha (average = 3070 plants per ha), and is associated with sites located at high latitudes and with high phosphorous content in the soil. The rarest species, N. macrocephala, shows maximum densities of 1180 plants per ha (average = 607 plants per ha) and is associated with localities with high soil calcium content. The distribution of this species is limited to sites with specific values of the environmental variables recorded, conferring it a high habitat specificity which accounts for its rarity.

  9. The solar photospheric abundance of carbon. Analysis of atomic carbon lines with the CO5BOLD solar model

    NARCIS (Netherlands)

    Caffau, E.; Ludwig, H.-G.; Bonifacio, P.; Faraggiana, R.; Steffen, M.; Freytag, B.; Kamp, I.; Ayres, T. R.

    2010-01-01

    Context. The analysis of the solar spectra using hydrodynamical simulations, with a specific selection of lines, atomic data, and method for computing deviations from local thermodynamical equilibrium, has led to a downward revision of the solar metallicity, Z. We are using the latest simulations co

  10. Symmetry group analysis of an ideal plastic flow

    CERN Document Server

    Lamothe, Vincent

    2011-01-01

    In this paper, we study the Lie point symmetry group of a system describing an ideal plastic plane flow in two dimensions in order to find analytical solutions. The infinitesimal generators that span the Lie algebra for this system are obtained. We completely classify the subalgebras of up to codimension two in conjugacy classes under the action of the symmetry group. Based on invariant forms, we use Ansatzes to compute symmetry reductions in such a way that the obtained solutions cover simultaneously many invariant and partially invariant solutions. We calculate solutions of the algebraic, trigonometric, inverse trigonometric and elliptic type. Some solutions depending on one or two arbitrary functions of one variable have also been found. In some cases, the shape of a potentially feasible extrusion die corresponding to the solution is deduced. These tools could be used to thin, curve, undulate or shape a ring in an ideal plastic material.

  11. The analysis of crystallographic symmetry types in finite groups

    Science.gov (United States)

    Sani, Atikah Mohd; Sarmin, Nor Haniza; Adam, Nooraishikin; Zamri, Siti Norziahidayu Amzee

    2014-06-01

    Undeniably, it is human nature to prefer objects which are considered beautiful. Most consider beautiful as perfection, hence they try to create objects which are perfectly balance in shape and patterns. This creates a whole different kind of art, the kind that requires an object to be symmetrical. This leads to the study of symmetrical objects and pattern. Even mathematicians and ethnomathematicians are very interested with the essence of symmetry. One of these studies were conducted on the Malay traditional triaxial weaving culture. The patterns derived from this technique are symmetrical and this allows for further research. In this paper, the 17 symmetry types in a plane, known as the wallpaper groups, are studied and discussed. The wallpaper groups will then be applied to the triaxial patterns of food cover in Malaysia.

  12. Lie group analysis for multi-scale plasma dynamics

    CERN Document Server

    Kovalev, Vladimir F

    2011-01-01

    An application of approximate transformation groups to study dynamics of a system with distinct time scales is discussed. The utilization of the Krylov-Bogoliubov-Mitropolsky method of averaging to find solutions of the Lie equations is considered. Physical illustrations from the plasma kinetic theory demonstrate the potentialities of the suggested approach. Several examples of invariant solutions for the system of the Vlasov-Maxwell equations for the two-component (electron-ion) plasma are presented.

  13. Failure mode and effects analysis A fuzzy group MCDM approach

    Directory of Open Access Journals (Sweden)

    A. Hadi-Vencheh

    2013-08-01

    Full Text Available In this paper, a new fuzzy group decision making (FGDM model based on alpha-level sets, is proposed to generate, more accurate fuzzy using, risk priority numbers (RPNs and ensure to be robust against the uncertainty. This model allows decision makers (DMs to evaluate FMEA risk factors using linguistic terms rather than precise numerical values, allows them to express their opinions independently. A case study is investigated using the proposed model to illustrate its applications in RPN assessment.

  14. Renormalization group analysis for an asymmetric simple exclusion process.

    Science.gov (United States)

    Mukherji, Sutapa

    2017-03-01

    A perturbative renormalization group method is used to obtain steady-state density profiles of a totally asymmetric simple exclusion process with particle adsorption and evaporation. This method allows us to obtain a globally valid solution for the density profile without the asymptotic matching of bulk and boundary layer solutions. In addition, we show a nontrivial scaling of the boundary layer width with the system size close to specific phase boundaries.

  15. Selected papers on harmonic analysis, groups, and invariants

    CERN Document Server

    Nomizu, Katsumi

    1997-01-01

    This volume contains papers that originally appeared in Japanese in the journal Sūgaku. Ordinarily the papers would appear in the AMS translation of that journal, but to expedite publication the Society has chosen to publish them as a volume of selected papers. The papers range over a variety of topics, including representation theory, differential geometry, invariant theory, and complex analysis.

  16. 22 AN ANALYSIS OF AUDITORY MANIFESTATIONS IN A GROUP ...

    African Journals Online (AJOL)

    AJTCAM

    were found; with the types of hearing loss being mainly sensorineural in ... and management of patients with AIDS are raised. .... A review of the literature on auditory findings implies variability as far as ... common otologic problems reported in this population are serous otitis ..... Data Analysis and Statistical Procedures.

  17. An Analysis of Students’ Communication during Group Work in Mathematics

    Directory of Open Access Journals (Sweden)

    Pinelopi D. Vasileiadou

    2013-06-01

    Full Text Available Utilizing observation grid and interview study methologies, this research examines the ways in which students communicate with each other while working in a team during problem solving in mathematics. The study focuses primarily on the language used for communication. Results suggest that participants make assumptions to solve mathematical problems and justify their individual opinions, and cooperate and help each other, rarely asking for their teacher’s help, while using both the ordinary, and the mathematical spoken and written language. The interview indicates that students, although not experienced in undertaking group work, are able to readily identify its benefits and positive aspects.

  18. An analysis of user engagement in student Facebook groups

    Directory of Open Access Journals (Sweden)

    Murray Lane

    2015-08-01

    Full Text Available Analysing the engagement of students in university-based Facebook groups can shed light on the nature of their learning experience and highlight leverage points to build on student success. While post-semester surveys and demographic participation data can highlight who was involved and how they subsequently felt about the experience, these techniques do not necessarily reflect real-time engagement. One way to gain insight into in-situ student experiences is by categorising the original posts and comments into predetermined frameworks of learning. This paper offers a systematic method of coding Facebook contributions within various engagement categories: motivation, discourse, cognition and emotive responses. 

  19. University-Community Engagement: A grid-group analysis

    Directory of Open Access Journals (Sweden)

    David Low

    2008-09-01

    Full Text Available University-community engagement involves complex issues, entangling multiple and interacting points of view, all of which operate in a wider dynamic evolving social environment. For this reason, there is often disagreement about why engagement is necessary or desirable, and whether there is one optimal method to practice it. To address this issue, I argue that university-community engagement can be examined as a form of enquiry. In this view, engagement is viewed as a system that arises through the recognition of the dissent it embodies. As such, enquiry functions to process disagreements into diverse methods of communication. Most of the disagreements utilised by universities are derived from external sources, thus university-based enquiry must necessarily involve a dialogue with a broader community or environment. In this sense, university-community engagement can be viewed most generally as a method that processes disagreements into shared understandings through enquiry. To demonstrate how university-community engagement functions from an enquiry point of view, I use Mary Douglas’ grid-group diagramming method to develop a critical typology for classifying university-community engagement. My modified grid-group diagram provides a structured typological space within which four distinct methods of university-community engagement can be identified and discussed – both in relation to their internal communicational characteristics, and in relation to each other. The university-engagement grid-group diagram is constructed by locating each of Douglas’ four quadrants within Charles Peirce’s four methods of enquiry. Peirce’s work is introduced because each of his four methods of enquiry deals specifically with how disagreements are processed and resolved. When Peirce’s methods for fixing belief are located in Douglas’ grid-group diagram, they create a sense-making framework for university-community engagement. It is argued

  20. Tensor renormalization group analysis of CP(N-1) model

    CERN Document Server

    Kawauchi, Hikaru

    2016-01-01

    We apply the higher order tensor renormalization group to lattice CP($N-1$) model in two dimensions. A tensor network representation of the CP($N-1$) model in the presence of the $\\theta$-term is derived. We confirm that the numerical results of the CP(1) model without the $\\theta$-term using this method are consistent with that of the O(3) model which is analyzed by the same method in the region $\\beta \\gg 1$ and that obtained by Monte Carlo simulation in a wider range of $\\beta$. The numerical computation including the $\\theta$-term is left for future challenges.

  1. Tensor renormalization group analysis of CP (N -1 ) model

    Science.gov (United States)

    Kawauchi, Hikaru; Takeda, Shinji

    2016-06-01

    We apply the higher-order tensor renormalization group to the lattice CP (N -1 ) model in two dimensions. A tensor network representation of the CP (N -1 ) model in the presence of the θ term is derived. We confirm that the numerical results of the CP(1) model without the θ term using this method are consistent with that of the O(3) model which is analyzed by the same method in the region β ≫1 and that obtained by the Monte Carlo simulation in a wider range of β . The numerical computation including the θ term is left for future challenges.

  2. Investigating Nearby Star-Forming Galaxies in the Ultraviolet with HST/COS Spectroscopy. I: Spectral Analysis and Interstellar Abundance Determinations

    CERN Document Server

    James, Bethan L; Heckman, Timothy M; Sohn, Sangmo Tony; Wolfe, Michael A

    2014-01-01

    This is the first in a series of three papers describing a project with the Cosmic Origins Spectrograph on the Hubble Space Telescope to measure abundances of the neutral interstellar medium (ISM) in a sample of 9 nearby star-forming galaxies. The goal is to assess the (in)homogeneities of the multiphase ISM in galaxies where the bulk of metals can be hidden in the neutral phase, yet the metallicity is inferred from the ionized gas in the HII regions. The sample, spanning a wide range in physical properties, is to date the best suited to investigate the metallicity behavior of the neutral gas at redshift z=0. ISM absorption lines were detected against the far-ultraviolet spectra of the brightest star-forming region(s) within each galaxy. Here we report on the observations, data reduction, and analysis of these spectra. Column densities were measured by a multi-component line-profile fitting technique, and neutral-gas abundances were obtained for a wide range of elements. Several caveats were considered includ...

  3. The formation of the Milky Way halo and its dwarf satellites; a NLTE-1D abundance analysis. I. Homogeneous set of atmospheric parameters

    Science.gov (United States)

    Mashonkina, L.; Jablonka, P.; Pakhomov, Yu.; Sitnova, T.; North, P.

    2017-08-01

    We present a homogeneous set of accurate atmospheric parameters for a complete sample of very and extremely metal-poor stars in the dwarf spheroidal galaxies (dSphs) Sculptor, Ursa Minor, Sextans, Fornax, Boötes I, Ursa Major II, and Leo IV. We also deliver a Milky Way (MW) comparison sample of giant stars covering the - 4 - 3.5 regime, the Ti i/Ti ii ionisation equilibrium is fulfilled in the NLTE calculations. In the log g - Teff plane, all the stars sit on the giant branch of the evolutionary tracks corresponding to [Fe/H] = - 2 to - 4, in line with their metallicities. For some of the most metal-poor stars of our sample, we achieve relatively inconsistent NLTE abundances from the two ionisation stages for both iron and titanium. We suggest that this is a consequence of the uncertainty in the Teff-colour relation at those metallicities. The results of this work provide the basis for a detailed abundance analysis presented in a companion paper. Tables A.1 and A.2 are also available at the CDS via anonymous ftp to http://cdsarc.u-strasbg.fr (http://130.79.128.5) or via http://cdsarc.u-strasbg.fr/viz-bin/qcat?J/A+A/604/A129

  4. New aerial survey and hierarchical model to estimate manatee abundance

    Science.gov (United States)

    Langimm, Cahterine A.; Dorazio, Robert M.; Stith, Bradley M.; Doyle, Terry J.

    2011-01-01

    Monitoring the response of endangered and protected species to hydrological restoration is a major component of the adaptive management framework of the Comprehensive Everglades Restoration Plan. The endangered Florida manatee (Trichechus manatus latirostris) lives at the marine-freshwater interface in southwest Florida and is likely to be affected by hydrologic restoration. To provide managers with prerestoration information on distribution and abundance for postrestoration comparison, we developed and implemented a new aerial survey design and hierarchical statistical model to estimate and map abundance of manatees as a function of patch-specific habitat characteristics, indicative of manatee requirements for offshore forage (seagrass), inland fresh drinking water, and warm-water winter refuge. We estimated the number of groups of manatees from dual-observer counts and estimated the number of individuals within groups by removal sampling. Our model is unique in that we jointly analyzed group and individual counts using assumptions that allow probabilities of group detection to depend on group size. Ours is the first analysis of manatee aerial surveys to model spatial and temporal abundance of manatees in association with habitat type while accounting for imperfect detection. We conducted the study in the Ten Thousand Islands area of southwestern Florida, USA, which was expected to be affected by the Picayune Strand Restoration Project to restore hydrology altered for a failed real-estate development. We conducted 11 surveys in 2006, spanning the cold, dry season and warm, wet season. To examine short-term and seasonal changes in distribution we flew paired surveys 1–2 days apart within a given month during the year. Manatees were sparsely distributed across the landscape in small groups. Probability of detection of a group increased with group size; the magnitude of the relationship between group size and detection probability varied among surveys. Probability

  5. Anion order in perovskites: a group-theoretical analysis.

    Science.gov (United States)

    Talanov, M V; Shirokov, V B; Talanov, V M

    2016-03-01

    Anion ordering in the structure of cubic perovskite has been investigated by the group-theoretical method. The possibility of the existence of 261 ordered low-symmetry structures, each with a unique space-group symmetry, is established. These results include five binary and 14 ternary anion superstructures. The 261 idealized anion-ordered perovskite structures are considered as aristotypes, giving rise to different derivatives. The structures of these derivatives are formed by tilting of BO6 octahedra, distortions caused by the cooperative Jahn-Teller effect and other physical effects. Some derivatives of aristotypes exist as real substances, and some as virtual ones. A classification of aristotypes of anion superstructures in perovskite is proposed: the AX class (the simultaneous ordering of A cations and anions in cubic perovskite structure), the BX class (the simultaneous ordering of B cations and anions) and the X class (the ordering of anions only in cubic perovskite structure). In most perovskites anion ordering is accompanied by cation ordering. Therefore, the main classes of anion order in perovskites are the AX and BX classes. The calculated structures of some anion superstructures are reported. Comparison of predictions and experimentally investigated anion superstructures shows coherency of theoretical and experimental results.

  6. Social Network Analysis of an Online Melanoma Discussion Group

    Science.gov (United States)

    Durant, Kathleen T.; McCray, Alexa T.; Safran, Charles

    2010-01-01

    We have developed tools to explore social networks that share information in medical forums to better understand the unmet informational needs of patients and family members facing cancer treatments. We define metrics that demonstrate members discussing interleukin-2 receive a stronger response from the melanoma discussion group than a typical topic. The interleukin-2 network has a different topology than the melanoma network, has a higher density, and its members are more likely to have a higher intimacy level with another member and a lower inquisitiveness level than a typical melanoma user. Members are more likely to join the interleukin-2 network to answer a question than in the melanoma network (probability =.2 ±.05 p-value=.001). Within the melanoma network 20% of the questions posed to the community do not get an answer. In the interleukin-2 network, 1.3% of the questions (one question) do not get a response. PMID:21347134

  7. ANALYSIS OF GROUP MAINTENANCE STRATEGY -ROAD PAVEMENT AND SEWERAGE PIPES-

    Science.gov (United States)

    Tanimoto, Keishi; Sugimoto, Yasuaki; Miyamoto, Shinya; Nada, Hideki; Hosoi, Yoshihiko

    Recently, it is critical to manage deteriorating sewerage and road facilities efficiently and strategically. Since the sewerage pipes are mostly installed under road pavement, the works for the replacement of the sewerage pipes are partially common to the works for the road. This means that the replacement cost can be saved by coordinating the timing of the replacements by sewerage pipe and road pavement. The purpose of the study is to develop the model based on Markov decision process to derive the optimal group maintenance policy so as to minimize lifecycle cost. Then the model is applied to case study area and demonstrated to estimate the lifecycle cost using statistical data such as pipe replacement cost, road pavement rehabilitation cost, and state of deterioration of pipes and road pavement.

  8. Random Lie group actions on compact manifolds: a perturbative analysis

    CERN Document Server

    Sadel, Christian

    2008-01-01

    A random Lie group action on a compact manifold generates a discrete time Markov process. The main object of this paper is the evaluation of associated Birkhoff sums in a regime of weak, but sufficiently effective coupling of the randomness. This effectiveness is expressed in terms of random Lie algebra elements and replaces the transience or Furstenberg's irreducibility hypothesis in related problems. The Birkhoff sum of any given smooth function then turns out to be equal to its integral w.r.t. a unique smooth measure on the manifold up to errors of the order of the coupling constant. Applications to the theory of products of random matrices and a model of a disordered quantum wire are presented.

  9. A renormalization group analysis of two-dimensional magnetohydrodynamic turbulence

    Science.gov (United States)

    Liang, Wenli Z.; Diamond, P. H.

    1993-01-01

    The renormalization group (RNG) method is used to study the physics of two-dimensional (2D) magnetohydrodynamic (MHD) turbulence. It is shown that, for a turbulent magnetofluid in two dimensions, no RNG transformation fixed point exists on account of the coexistence of energy transfer to small scales and mean-square magnetic flux transfer to large scales. The absence of a fixed point renders the RNG method incapable of describing the 2D MHD system. A similar conclusion is reached for 2D hydrodynamics, where enstrophy flows to small scales and energy to large scales. These analyses suggest that the applicability of the RNG method to turbulent systems is intrinsically limited, especially in the case of systems with dual-direction transfer.

  10. Renormalization group analysis of anisotropic diffusion in turbulent shear flows

    Science.gov (United States)

    Rubinstein, Robert; Barton, J. Michael

    1991-01-01

    The renormalization group is applied to compute anisotropic corrections to the scalar eddy diffusivity representation of turbulent diffusion of a passive scalar. The corrections are linear in the mean velocity gradients. All model constants are computed theoretically. A form of the theory valid at arbitrary Reynolds number is derived. The theory applies only when convection of the velocity-scalar correlation can be neglected. A ratio of diffusivity components, found experimentally to have a nearly constant value in a variety of shear flows, is computed theoretically for flows in a certain state of equilibrium. The theoretical value is well within the fairly narrow range of experimentally observed values. Theoretical predictions of this diffusivity ratio are also compared with data from experiments and direct numerical simulations of homogeneous shear flows with constant velocity and scalar gradients.

  11. Behavioural activation for depression; an update of meta-analysis of effectiveness and sub group analysis.

    Directory of Open Access Journals (Sweden)

    David Ekers

    Full Text Available BACKGROUND: Depression is a common, disabling condition for which psychological treatments are recommended. Behavioural activation has attracted increased interest in recent years. It has been over 5 years since our meta-analyses summarised the evidence supporting and this systematic review updates those findings and examines moderators of treatment effect. METHOD: Randomised trials of behavioural activation for depression versus controls or anti-depressant medication were identified using electronic database searches, previous reviews and reference lists. Data on symptom level and study level moderators were extracted and analysed using meta-analysis, sub-group analysis and meta-regression respectively. RESULTS: Twenty six randomised controlled trials including 1524 subjects were included in this meta-analysis. A random effects meta-analysis of symptom level post treatment showed behavioural activation to be superior to controls (SMD -0.74 CI -0.91 to -0.56, k = 25, N = 1088 and medication (SMD -0.42 CI -0.83 to-0.00, k = 4, N = 283. Study quality was low in the majority of studies and follow- up time periods short. There was no indication of publication bias and subgroup analysis showed limited association between moderators and effect size. CONCLUSIONS: The results in this meta-analysis support and strengthen the evidence base indicating Behavioural Activation is an effective treatment for depression. Further high quality research with longer term follow-up is needed to strengthen the evidence base.

  12. Semi-quantitative analysis of solid waste flows from nano-enabled consumer products in Europe, Denmark and the United Kingdom - Abundance, distribution and management

    DEFF Research Database (Denmark)

    Heggelund, Laura Roverskov; Hansen, Steffen Foss; Astrup, Thomas Fruergaard

    2016-01-01

    , and especially the knowledge of ENM behaviour and potential effects at the end-of-life stage of the products is scarce. To gain a better understanding of the end-of-life waste treatment of nano-enabled consumer product, we provide an overview of the ENMs flowing into and throughout waste systems in Europe......, Denmark and the United Kingdom. Using a nanoproduct inventory (nanodb.dk), we performed a four-step analysis to estimate the most abundant ENMs and in which waste fractions they are present. We found that in terms of number of products: (i) nano silver is the most used ENM in consumer products, and (ii......) plastic from used product containers is the largest waste fraction also comprising a large variety of ENMs, though possibly in very small masses. Also, we showed that the local waste management system can influence the distribution of ENMs. It is recommended that future research focus on recycling...

  13. PREFACE: Electron Microscopy and Analysis Group Conference (EMAG2015)

    Science.gov (United States)

    MacLaren, Ian

    2015-10-01

    2015 marked a new venture for the EMAG group of the Institute of Physics in that the conference was held in conjunction with the MMC2015 conference at the wonderful Manchester Central conference centre. As anyone who was there would be able to confirm, this went exceptionally well and was a really vibrant and top quality conference. The oral sessions were filled with good talks, the poster sessions were very lively, and there was a good balance between oral sessions with a specifically "EMAG" identity, and the integration into a larger conference with the ability to switch between up to six parallel sessions covering physical sciences, techniques, and life sciences. The large conference also attracted a wide range of exhibitors, and this is essential for the ongoing success of all of our work, in a field that is very dependent on continued technical innovation and on collaborations between academic researchers and commercial developers of microscopes, holders, detectors, spectrometers, sample preparation equipment, and software, among other things. As has long been the case at EMAG, all oral and poster presenters were invited to submit papers for consideration for the proceedings. As ever, these papers were independently reviewed by other conference attendees, with the aim of continuing the long tradition of the EMAG proceedings being a top quality, peer-reviewed publication, worthy of reference in future years. Whilst I recognise that not all presenters were able to submit papers to the proceedings (for instance due to the need not to prejudice publication in some other journals, or due to avoiding duplicate publication of data), we are gratified that our presenters submitted as many papers as they did. The 41 papers included provide an interesting snapshot of many of the areas covered in the conference presentations, including functional materials, coatings, 3D microscopy, FIB and SEM, nanomaterials, magnetic and structural materials, advances in EM techniques

  14. Transcriptional profiling by cDNA-AFLP analysis showed differential transcript abundance in response to water stress in Populus hopeiensis

    Directory of Open Access Journals (Sweden)

    Song Yuepeng

    2012-06-01

    Full Text Available Abstract Background Drought is one of the main environmental factors limiting tree growth and productivity of plantation forests worldwide. Populus hopeiensis Hu et Chow is one of the most important commercial plantation tree species in China. However, the genes controlling drought tolerance in this species have not been identified or characterized. Here, we conducted differential expression analyses and identified a number of genes that were up- or downregulated in P. hopeiensis during water stress. To the best of our knowledge, this is the first comprehensive study of differentially expressed genes in water-stressed P. hopeiensis. Results Using the cDNA-AFLP detection technique, we used 256 primer combinations to identify differentially expressed genes in P. hopeiensis during water stress. In total, 415 transcript derived-fragments (TDFs were obtained from 10× deep sequencing of 473 selected TDFs. Of the 415 TDFs, 412 were annotated by BLAST searches against various databases. The majority of these genes encoded products involved in ion transport and compartmentalization, cell division, metabolism, and protein synthesis. The TDFs were clustered into 12 groups on the basis of their expression patterns. Of the 415 reliable TDFs, the sequences of 35 were homologous to genes that play roles in short or long-term resistance to drought stress. Some genes were further selected for validation of cDNA-AFLP expression patterns using real-time PCR analyses. The results confirmed the expression patterns that were detected using the cDNA-AFLP technique. Conclusion The cDNA-AFLP technique is an effective and powerful tool for identifying candidate genes that are differentially expressed under water stress. We demonstrated that 415 TDFs were differentially expressed in water-stressed poplar. The products of these genes are involved in various biological processes in the drought response of poplar. The results of this study will aid in the identification of

  15. Classical and Quantum Burgers Fluids: A Challenge for Group Analysis

    Directory of Open Access Journals (Sweden)

    Philip Broadbridge

    2015-10-01

    Full Text Available The most general second order irrotational vector field evolution equation is constructed, that can be transformed to a single equation for the Cole–Hopf potential. The exact solution to the radial Burgers equation, with constant mass influx through a spherical supply surface, is constructed. The complex linear Schrödinger equation is equivalent to an integrable system of two coupled real vector equations of Burgers type. The first velocity field is the particle current divided by particle probability density. The second vector field gives a complex valued correction to the velocity that results in the correct quantum mechanical correction to the kinetic energy density of the Madelung fluid. It is proposed how to use symmetry analysis to systematically search for other constrained potential systems that generate a closed system of vector component evolution equations with constraints other than irrotationality.

  16. Quasiclassical analysis of spectra in two groups of central potentials

    CERN Document Server

    Shpatakovskaya, G V

    2001-01-01

    The method for the spectra analysis in the gravitational central potentials with the Coulomb feature in the zero (interatomic potentials) and the finite ones in the zero (potentials in the spheric clusters nuclei) is proposed. It is shown that by the degeneration removal by the orbital quantum number for the n-shell by small l the difference epsilon sub n sub l - epsilon sub n sub 0 approx = a subepsilon sub sub n sub sub 0 (l + 1/2) sup 2. The correctness of the presented formula for the internal electrons is demonstrated by the mercury atoms spectrum calculations. The reverse dependence takes place, as a rule, in the cluster potentials. The dependence of the area position with the degenerated level on the N cluster size is analyzed by the example of the Al sub N aluminium clusters. It is known that the increase in the N leads to the pressing-out of this area upwards

  17. Likelihood analysis of the Local Group acceleration revisited

    CERN Document Server

    Ciecielag, P

    2004-01-01

    We reexamine likelihood analyzes of the Local Group (LG) acceleration, paying particular attention to nonlinear effects. Under the approximation that the joint distribution of the LG acceleration and velocity is Gaussian, two quantities describing nonlinear effects enter these analyzes. The first one is the coherence function, i.e. the cross-correlation coefficient of the Fourier modes of gravity and velocity fields. The second one is the ratio of velocity power spectrum to gravity power spectrum. To date, in all analyzes of the LG acceleration the second quantity was not accounted for. Extending our previous work, we study both the coherence function and the ratio of the power spectra. With the aid of numerical simulations we obtain expressions for the two as functions of wavevector and \\sigma_8. Adopting WMAP's best determination of \\sigma_8, we estimate the most likely value of the parameter \\beta and its errors. As the observed values of the LG velocity and gravity, we adopt respectively a CMB-based estim...

  18. Life-table analysis of Anopheles malaria vectors: generational mortality as tool in mosquito vector abundance and control studies

    Directory of Open Access Journals (Sweden)

    Godwin Ray Anugboba Okogun

    2005-06-01

    Full Text Available Background & objectives: Vector control will for sometime remain a primary weapon in the waragainst vector borne diseases. Malaria is of paramount importance in this with its associated highmorbidity and mortality especially in sub-Saharan Africa. This study on generational mortality associatedfactors in Anopheles mosquitoes life-table analysis was designed to investigate the fecundity,levels of mortality and mortality associated factors at the aquatic stages of anopheline malaria vectors.Methods: Mortality associated factors were investigated at the eggs, I and II instar larval, III and IVinstar larval and pupal stages of two anopheline species— Anopheles pseudopunctipennis (Theobaldand An. gambiae life-cycles in screen cages. Adult male and female mosquitoes were membrane filterfedand algae in culture medium formed the bulk of food substances for the larval stage. Environmentaltemperature of culture media, pH and some associated physio-chemical factors were also determined.Results: Results showed significant mortality rates at various aquatic stages. Infertility, cannibalismand environmental factors were the major factors responsible for mortality at the egg, larval and pupalstages respectively.Interpretation & conclusion: The aquatic stages of Anopheles mosquito mortality factor K and themortality factors at the various stages investigated k1, k2, k3 and k4 are discussed. Our recommendationsinclude further studies on the possible genetic modification of predacious An. pseudopunctipennislarvae and/or its modification for the production of sterile/infertile eggs as possible alternativesin the reduction and control of anopheline malaria burden.

  19. Sunspots, Starspots, and Elemental Abundances

    Science.gov (United States)

    Doschek, George A.; Warren, Harry P.

    2017-08-01

    The composition of plasma in solar and stellar atmospheres is not fixed, but varies from feature to feature. These variations are organized by the First Ionization Potential (FIP) of the element. Solar measurements often indicate that low FIP elements (10 eV, such as C, N, O, Ar, He) compared to abundances in the photosphere. Stellar observations have also shown similar enrichments. An inverse FIP effect, where the low FIP elements are depleted, has been observed in stellar coronae of stars believed to have large starspots in their photospheres. The abundances are important for determining radiative loss rates in models, tracing the origin of the slow solar wind, and for understanding wave propagation in the chromosphere and corona. Recently, inverse FIP effects have been discovered in the Sun (Doschek, Warren, & Feldman 2015, ApJ, 808, L7) from spectra obtained by the Extreme-ultraviolet Imaging Spectrometer (EIS) on the Hinode spacecraft. The inverse FIP regions seem always to be near sunspots and cover only a very small area (characteristic length = a few arcseconds). However, in pursuing the search for inverse FIP regions, we have found that in some sunspot groups the coronal abundance at a temperature of 3-4 MK can be near photospheric over much larger areas of the sun near the sunspots (e.g., 6,000 arcsec2). Also, sometimes the abundances at 3-4 MK are in between coronal and photospheric values. This can occur in small areas of an active region. It is predicted (Laming 2015, Sol. Phys., 12, 2) that the FIP effect should be highly variable in the corona. Several examples of coronal abundance variations are presented. Our work indicates that a comprehensive re-investigation of solar abundances is highly desirable. This work is supported by a NASA Hinode grant.

  20. The impact of environmental variability on Atlantic mackerel Scomber scombrus larval abundance to the west of the British Isles

    DEFF Research Database (Denmark)

    Pitois, Sophie G.; Jansen, Teunis; Pinnegar, John

    2015-01-01

    abundances of zooplankton and the larger phytoplankton groups, to a system characterized by higher temperature, lower salinities, lower abundances of zooplankton and larger phytoplankton and higher abundances of the small phytoplankton species. Analysis revealed a very weak positive correlation between...... where other data (such as egg surveys) are drawn in to compensate for the spatial issues could prove to be the way forward. Crown Copyright (C) 2015 Published by Elsevier Ltd....

  1. Nuclear data evaluation and group constant generation for reactor analysis

    Energy Technology Data Exchange (ETDEWEB)

    Kim, Jung Doh; Kil, Chung Sub [Korea Atomic Energy Research Institute, Taejon (Korea, Republic of)

    1994-12-01

    Data testing of ENDF/B-VI.2 was performed and ACE-format continuous point-wise cross section library from ENDF/B-VI.2 for MCNP was validated through CSEWG benchmark and power plant mockup experiments. The calculated k-effective of ORNL-1, -2, -3, -4 and -10 with ENDF/B-VI are low by about 0.5% but those of L-7, -8, -9, -10 and -11 show good agreement with experiments. Overall results for uranium core with ENDF/B-VI is low in critically than with ENDF/B-V. The calculated results with ENDF/B-VI for PNL-6 {approx} 12 of plutonium core and PNL-30 {approx} 35 of mixed oxide core show good agreement with the experiments. The results of critically calculation for fast core benchmark do not show large difference between ENDF/B-VI and -V. But the calculated results of reaction rate ratio with ENDF/B-VI are improved, compared with ENDF/B-V. The calculated power distribution for VENUS PWR mockup core and typical BWR core of GE with both of ENDF/B-VI and -V agree well with measured values. From the above results, newly generated MCNP library from ENDF/B-VI is useful for nuclear and shielding design and analysis. 5 figs, 13 tabs, 11 refs. (Author).

  2. Primordial Deuterium Abundance Measurements

    CERN Document Server

    Levshakov, S A; Takahara, F; Levshakov, Sergei A.; Kegel, Wilhelm H.; Takahara, Fumio

    1997-01-01

    Deuterium abundances measured recently from QSO absorption-line systems lie in the range from 3 10^{-5} to 3 10^{-4}, which shed some questions on standard big bang theory. We show that this discordance may simply be an artifact caused by inadequate analysis ignoring spatial correlations in the velocity field in turbulent media. The generalized procedure (accounting for such correlations) is suggested to reconcile the D/H measurements. An example is presented based on two high-resolution observations of Q1009+2956 (low D/H) [1,2] and Q1718+4807 (high D/H) [8,9]. We show that both observations are compatible with D/H = 4.1 - 4.6 10^{-5}, and thus support SBBN. The estimated mean value = 4.4 10^{-5} corresponds to the baryon-to-photon ratio during SBBN eta = 4.4 10^{-10} which yields the present-day baryon density Omega_b h^2 = 0.015.

  3. A statistical analysis of the Two Dimensional XMM-Newton Group Survey: The impact of feedback on group properties

    CERN Document Server

    Johnson, Ria; Finoguenov, Alexis

    2009-01-01

    (abridged) We present a statistical analysis of 28 nearby galaxy groups from the Two-Dimensional XMM-Newton Group Survey (2dXGS). We focus on entropy and the role of feedback, dividing the sample into cool core (CC) and non cool core (NCC) systems, the first time the latter have been studied in detail in the group regime. The coolest groups have steeper entropy profiles than the warmest systems, and NCC groups have higher central entropy and exhibit more scatter than their CC counterparts. We compare the entropy distribution of the gas in each system to the expected theoretical distribution ignoring non-gravitational processes. In all cases, the observed maximum entropy far exceeds that expected theoretically, and simple models for modifications of the theoretical entropy distribution perform poorly. Applying initial pre-heating, followed by radiative cooling, generally fails to match the low entropy behaviour, and only performs well when the difference between the maximum entropy of the observed and theoreti...

  4. Chemical analysis of carbon stars in the Local Group: I. The Small Magellanic Cloud and the Sagittarius dwarf spheroidal galaxy

    CERN Document Server

    De Laverny, P; Dominguez, I; Plez, B; Straniero, O; Wahlin, R; Eriksson, K; Jørgensen, U G

    2005-01-01

    We present the first results of our ongoing chemical study of carbon stars in the Local Group of galaxies. We used spectra obtained with UVES at the 8.2 m Kueyen-VLT telescope and a new grid of spherical model atmospheres for cool carbon-rich stars which include polyatomic opacities, to perform a full chemical analysis of one carbon star, BMB-B~30, in the Small Magellanic Cloud (SMC) and two, IGI95-C1 and IGI95-C3, in the Sagittarius Dwarf Spheroidal (Sgr dSph) galaxy. Our main goal is to test the dependence on the stellar metallicity of the s-process nucleosynthesis and mixing mechanism occurring in AGB stars. For these three stars, we find important s-element enhancements with respect to the mean metallicity ([M/H]), namely [s/M]$\\approx$+1.0, similar to the figure found in galactic AGB stars of similar metallicity. The abundance ratios derived between elements belonging to the first and second s-process abundance peaks, corresponding to nuclei with a magic number of neutrons N=50 (88Sr, 89Y, 90Zr) and N=82...

  5. Independent vector analysis for capturing common components in fMRI group analysis

    DEFF Research Database (Denmark)

    Engberg, Astrid M. E.; Andersen, Kasper W.; Mørup, Morten;

    2016-01-01

    -subject studies. Independent vector analysis (IVA) is a promising alternative approach to perform group fMRI analysis, which has been shown to better capture components with high inter-subject variability. The most widely applied IVA method is based on the multivariate Laplace distribution (IVA-GL), which assumes...... independence within subject components coupled across subjects only through shared scaling. In this study, we propose a more natural formulation of IVA based on a Normal-Inverse-Gamma distribution (IVA-NIG), in which the components can be directly interpreted as realizations of a common mean component...... with individual subject variability. We evaluate the performance of IVA-NIG compared to IVA-GL and similar decomposition methods, through the application of two types of simulated data and on real task fMRI data. The results show that IVA-NIG offers superior detection of components in simulated fMRI data. On real...

  6. Temporal Patterns of Abundance of Aedes aegypti and Aedes albopictus (Diptera: Culicidae) and Mitochondrial DNA Analysis of Ae. albopictus in the Central African Republic

    Science.gov (United States)

    Kamgang, Basile; Ngoagouni, Carine; Manirakiza, Alexandre; Nakouné, Emmanuel; Paupy, Christophe; Kazanji, Mirdad

    2013-01-01

    The invasive Asian tiger mosquito Aedes albopictus (Diptera: Culicidae) was first reported in central Africa in 2000, in Cameroon, with the indigenous mosquito species Ae. aegypti (Diptera: Culicidae). Today, this invasive species is present in almost all countries of the region, including the Central African Republic (CAR), where it was first recorded in 2009. As invasive species of mosquitoes can affect the distribution of native species, resulting in new patterns of vectors and concomitant risk for disease, we undertook a comparative study early and late in the wet season in the capital and the main cities of CAR to document infestation and the ecological preferences of the two species. In addition, we determined the probable geographical origin of invasive populations of Ae. albopictus with two mitochondrial DNA genes, COI and ND5. Analysis revealed that Ae. aegypti was more abundant earlier in the wet season and Ae. albopictus in the late wet season. Used tyres were the most heavily colonized productive larval habitats for both species in both seasons. The invasive species Ae. albopictus predominated over the resident species at all sites in which the two species were sympatric. Mitochondrial DNA analysis revealed broad low genetic diversity, confirming recent introduction of Ae. albopictus in CAR. Phylogeographical analysis based on COI polymorphism indicated that the Ae. albopictus haplotype in the CAR population segregated into two lineages, suggesting multiple sources of Ae. albopictus. These data may have important implications for vector control strategies in central Africa. PMID:24349596

  7. Temporal patterns of abundance of Aedes aegypti and Aedes albopictus (Diptera: Culicidae and mitochondrial DNA analysis of Ae. albopictus in the Central African Republic.

    Directory of Open Access Journals (Sweden)

    Basile Kamgang

    Full Text Available The invasive Asian tiger mosquito Aedes albopictus (Diptera: Culicidae was first reported in central Africa in 2000, in Cameroon, with the indigenous mosquito species Ae. aegypti (Diptera: Culicidae. Today, this invasive species is present in almost all countries of the region, including the Central African Republic (CAR, where it was first recorded in 2009. As invasive species of mosquitoes can affect the distribution of native species, resulting in new patterns of vectors and concomitant risk for disease, we undertook a comparative study early and late in the wet season in the capital and the main cities of CAR to document infestation and the ecological preferences of the two species. In addition, we determined the probable geographical origin of invasive populations of Ae. albopictus with two mitochondrial DNA genes, COI and ND5. Analysis revealed that Ae. aegypti was more abundant earlier in the wet season and Ae. albopictus in the late wet season. Used tyres were the most heavily colonized productive larval habitats for both species in both seasons. The invasive species Ae. albopictus predominated over the resident species at all sites in which the two species were sympatric. Mitochondrial DNA analysis revealed broad low genetic diversity, confirming recent introduction of Ae. albopictus in CAR. Phylogeographical analysis based on COI polymorphism indicated that the Ae. albopictus haplotype in the CAR population segregated into two lineages, suggesting multiple sources of Ae. albopictus. These data may have important implications for vector control strategies in central Africa.

  8. Determination of microbial carbon sources and cycling during remediation of petroleum hydrocarbon impacted soil using natural abundance (14)C analysis of PLFA.

    Science.gov (United States)

    Cowie, Benjamin R; Greenberg, Bruce M; Slater, Gregory F

    2010-04-01

    In a petroleum impacted land-farm soil in Sarnia, Ontario, compound-specific natural abundance radiocarbon analysis identified biodegradation by the soil microbial community as a major pathway for hydrocarbon removal in a novel remediation system. During remediation of contaminated soils by a plant growth promoting rhizobacteria enhanced phytoremediation system (PEPS), the measured Delta(14)C of phospholipid fatty acid (PLFA) biomarkers ranged from -793 per thousand to -897 per thousand, directly demonstrating microbial uptake and utilization of petroleum hydrocarbons (Delta(14)C(PHC) = -1000 per thousand). Isotopic mass balance indicated that more than 80% of microbial PLFA carbon was derived from petroleum hydrocarbons (PHC) and a maximum of 20% was obtained from metabolism of more modern carbon sources. These PLFA from the contaminated soils were the most (14)C-depleted biomarkers ever measured for an in situ environmental system, and this study demonstrated that the microbial community in this soil was subsisting primarily on petroleum hydrocarbons. In contrast, the microbial community in a nearby uncontaminated control soil maintained a more modern Delta(14)C signature than total organic carbon (Delta(14)C(PLFA) = +36 per thousand to -147 per thousand, Delta(14)C(TOC) = -148 per thousand), indicating preferential consumption of the most modern plant-derived fraction of soil organic carbon. Measurements of delta(13)C and Delta(14)C of soil CO(2) additionally demonstrated that mineralization of PHC contributed to soil CO(2) at the contaminated site. The CO(2) in the uncontaminated control soil exhibited substantially more modern Delta(14)C values, and lower soil CO(2) concentrations than the contaminated soils, suggesting increased rates of soil respiration in the contaminated soils. In combination, these results demonstrated that biodegradation in the soil microbial community was a primary pathway of petroleum hydrocarbon removal in the PEPS system. This study

  9. Incorporating Endmember Variability into Linear Unmixing of Coarse Resolution Imagery: Mapping Large-Scale Impervious Surface Abundance Using a Hierarchically Object-Based Spectral Mixture Analysis

    Directory of Open Access Journals (Sweden)

    Chengbin Deng

    2015-07-01

    Full Text Available As an important indicator of anthropogenic impacts on the Earth’s surface, it is of great necessity to accurately map large-scale urbanized areas for various science and policy applications. Although spectral mixture analysis (SMA can provide spatial distribution and quantitative fractions for better representations of urban areas, this technique is rarely explored with 1-km resolution imagery. This is due mainly to the absence of image endmembers associated with the mixed pixel problem. Consequently, as the most profound source of error in SMA, endmember variability has rarely been considered with coarse resolution imagery. These issues can be acute for fractional land cover mapping due to the significant spectral variations of numerous land covers across a large study area. To solve these two problems, a hierarchically object-based SMA (HOBSMA was developed (1 to extrapolate local endmembers for regional spectral library construction; and (2 to incorporate endmember variability into linear spectral unmixing of MODIS 1-km imagery for large-scale impervious surface abundance mapping. Results show that by integrating spatial constraints from object-based image segments and endmember extrapolation techniques into multiple endmember SMA (MESMA of coarse resolution imagery, HOBSMA improves the discriminations between urban impervious surfaces and other land covers with well-known spectral confusions (e.g., bare soil and water, and particularly provides satisfactory representations of urban fringe areas and small settlements. HOBSMA yields promising abundance results at the km-level scale with relatively high precision and small bias, which considerably outperforms the traditional simple mixing model and the aggregated MODIS land cover classification product.

  10. A 3D analysis of the metal distribution in the compact group of galaxies HCG 31

    Science.gov (United States)

    Torres-Flores, Sergio; Mendes de Oliveira, Claudia; Alfaro-Cuello, Mayte; Rodrigo Carrasco, Eleazar; de Mello, Duilia; Amram, Philippe

    2015-02-01

    We present new Gemini/GMOS integral field unit observations of the central region of the merging compact group of galaxies HCG 31. Using this data set, we derive the oxygen abundances for the merging galaxies HCG 31A and HCG 31C. We found a smooth metallicity gradient between the nuclei of these galaxies, suggesting a mixing of metals between these objects. These results are confirmed by high-resolution Fabry-Perot data, from which we infer that gas is flowing between HCG 31A and HCG 31C.

  11. Hf Transition Probabilities and Abundances

    CERN Document Server

    Lawler, J E; Labby, Z E; Sneden, C; Cowan, J J; Ivans, I I

    2006-01-01

    Radiative lifetimes from laser-induced fluorescence measurements, accurate to about +/- 5 percent, are reported for 41 odd-parity levels of Hf II. The lifetimes are combined with branching fractions measured using Fourier transform spectrometry to determine transition probabilities for 150 lines of Hf II. Approximately half of these new transition probabilities overlap with recent independent measurements using a similar approach. The two sets of measurements are found to be in good agreement for measurements in common. Our new laboratory data are applied to refine the hafnium photospheric solar abundance and to determine hafnium abundances in 10 metal-poor giant stars with enhanced r-process abundances. For the Sun we derive log epsilon (Hf) = 0.88 +/- 0.08 from four lines; the uncertainty is dominated by the weakness of the lines and their blending by other spectral features. Within the uncertainties of our analysis, the r-process-rich stars possess constant Hf/La and Hf/Eu abundance ratios, log epsilon (Hf...

  12. Multiple-Group Analysis Using the sem Package in the R System

    Science.gov (United States)

    Evermann, Joerg

    2010-01-01

    Multiple-group analysis in covariance-based structural equation modeling (SEM) is an important technique to ensure the invariance of latent construct measurements and the validity of theoretical models across different subpopulations. However, not all SEM software packages provide multiple-group analysis capabilities. The sem package for the R…

  13. Using Molecular Modeling in Teaching Group Theory Analysis of the Infrared Spectra of Organometallic Compounds

    Science.gov (United States)

    Wang, Lihua

    2012-01-01

    A new method is introduced for teaching group theory analysis of the infrared spectra of organometallic compounds using molecular modeling. The main focus of this method is to enhance student understanding of the symmetry properties of vibrational modes and of the group theory analysis of infrared (IR) spectra by using visual aids provided by…

  14. Using Molecular Modeling in Teaching Group Theory Analysis of the Infrared Spectra of Organometallic Compounds

    Science.gov (United States)

    Wang, Lihua

    2012-01-01

    A new method is introduced for teaching group theory analysis of the infrared spectra of organometallic compounds using molecular modeling. The main focus of this method is to enhance student understanding of the symmetry properties of vibrational modes and of the group theory analysis of infrared (IR) spectra by using visual aids provided by…

  15. Bayesian analysis of interiors of HD 219134b, Kepler-10b, Kepler-93b, CoRoT-7b, 55 Cnc e, and HD 97658b using stellar abundance proxies

    CERN Document Server

    Dorn, C; Venturini, J

    2016-01-01

    Using a generalized Bayesian inference method, we aim to explore the possible interior structures of six selected exoplanets for which planetary mass and radius measurements are available in addition to stellar host abundances: HD~219134b, Kepler-10b, Kepler-93b, CoRoT-7b, 55~Cnc~e, and HD~97658b. We aim to investigate the importance of stellar abundance proxies for the planetary bulk composition (namely Fe/Si and Mg/Si) on prediction of planetary interiors. We performed a full probabilistic Bayesian inference analysis to formally account for observational and model uncertainties while obtaining confidence regions of structural and compositional parameters of core, mantle, ice layer, ocean, and atmosphere. We determined how sensitive our parameter predictions depend on (1) different estimates of bulk abundance constraints and (2) different correlations of bulk abundances between planet and host star. [...] Although the possible ranges of interior structures are large, structural parameters and their correlati...

  16. High and Low Consensus Groups: A Content and Relational Interaction Analysis.

    Science.gov (United States)

    DeStephen, Rolayne S.

    1983-01-01

    Analyzed the complete interaction of high and low consensus groups in a basic small group course. Interaction analysis indicated that both the relational and content levels of communication are significantly different for high versus low consensus groups. The conclusion that increased feedback leads to decision satisfaction was confirmed. (JAC)

  17. Using multiple group modeling to test moderators in meta-analysis.

    Science.gov (United States)

    Schoemann, Alexander M

    2016-12-01

    Meta-analysis is a popular and flexible analysis that can be fit in many modeling frameworks. Two methods of fitting meta-analyses that are growing in popularity are structural equation modeling (SEM) and multilevel modeling (MLM). By using SEM or MLM to fit a meta-analysis researchers have access to powerful techniques associated with SEM and MLM. This paper details how to use one such technique, multiple group analysis, to test categorical moderators in meta-analysis. In a multiple group meta-analysis a model is fit to each level of the moderator simultaneously. By constraining parameters across groups any model parameter can be tested for equality. Using multiple groups to test for moderators is especially relevant in random-effects meta-analysis where both the mean and the between studies variance of the effect size may be compared across groups. A simulation study and the analysis of a real data set are used to illustrate multiple group modeling with both SEM and MLM. Issues related to multiple group meta-analysis and future directions for research are discussed. Copyright © 2016 John Wiley & Sons, Ltd.

  18. Constraint Force Analysis of Metamorphic Joints Basedon the Augmented Assur Groups

    Institute of Scientific and Technical Information of China (English)

    LI Shujun; WANG Hongguang; YANG Qiang

    2015-01-01

    In order to obtain a simple way for the force analysis of metamorphic mechanisms, the systematic method to unify the force analysis approach of metamorphic mechanisms as that of conventional planar mechanisms is proposed. A force analysis method of metamorphic mechanisms is developed by transforming the augmented Assur groups into Assur groups, so that the force analysis problem of metamorphic mechanisms is converted into the force analysis problems of conventional planar mechanisms. The constraint force change rules and values of metamorphic joints are obtained by the proposed method, and the constraint force analysis equations of revolute metamorphic joints in augmented Assur group RRRR and prismatic metamorphic joints in augmented Assur group RRPR are deduced. The constraint force analysis is illustrated by the constrained spring force design of paper folding metamorphic mechanism, and its metamorphic working process is controlled by the spring force and geometric constraints of metamorphic joints. The results of spring force show that developped design method and approach are feasible and practical. By transforming augmented Assur groups into Assur groups, a new method for the constraint force analysis of metamorphic joints is proposed firstly to provide the basis for dynamic analysis of metamorphic mechanism.

  19. Johnson Space Center's Risk and Reliability Analysis Group 2008 Annual Report

    Science.gov (United States)

    Valentine, Mark; Boyer, Roger; Cross, Bob; Hamlin, Teri; Roelant, Henk; Stewart, Mike; Bigler, Mark; Winter, Scott; Reistle, Bruce; Heydorn,Dick

    2009-01-01

    The Johnson Space Center (JSC) Safety & Mission Assurance (S&MA) Directorate s Risk and Reliability Analysis Group provides both mathematical and engineering analysis expertise in the areas of Probabilistic Risk Assessment (PRA), Reliability and Maintainability (R&M) analysis, and data collection and analysis. The fundamental goal of this group is to provide National Aeronautics and Space Administration (NASA) decisionmakers with the necessary information to make informed decisions when evaluating personnel, flight hardware, and public safety concerns associated with current operating systems as well as with any future systems. The Analysis Group includes a staff of statistical and reliability experts with valuable backgrounds in the statistical, reliability, and engineering fields. This group includes JSC S&MA Analysis Branch personnel as well as S&MA support services contractors, such as Science Applications International Corporation (SAIC) and SoHaR. The Analysis Group s experience base includes nuclear power (both commercial and navy), manufacturing, Department of Defense, chemical, and shipping industries, as well as significant aerospace experience specifically in the Shuttle, International Space Station (ISS), and Constellation Programs. The Analysis Group partners with project and program offices, other NASA centers, NASA contractors, and universities to provide additional resources or information to the group when performing various analysis tasks. The JSC S&MA Analysis Group is recognized as a leader in risk and reliability analysis within the NASA community. Therefore, the Analysis Group is in high demand to help the Space Shuttle Program (SSP) continue to fly safely, assist in designing the next generation spacecraft for the Constellation Program (CxP), and promote advanced analytical techniques. The Analysis Section s tasks include teaching classes and instituting personnel qualification processes to enhance the professional abilities of our analysts

  20. Droplet Digital PCR versus qPCR for gene expression analysis with low abundant targets: from variable nonsense to publication quality data.

    Science.gov (United States)

    Taylor, Sean C; Laperriere, Genevieve; Germain, Hugo

    2017-05-25

    Quantitative PCR (qPCR) has become the gold standard technique to measure cDNA and gDNA levels but the resulting data can be highly variable, artifactual and non-reproducible without appropriate verification and validation of both samples and primers. The root cause of poor quality data is typically associated with inadequate dilution of residual protein and chemical contaminants that variably inhibit Taq polymerase and primer annealing. The most susceptible, frustrating and often most interesting samples are those containing low abundant targets with small expression differences of 2-fold or lower. Here, Droplet Digital PCR (ddPCR) and qPCR platforms were directly compared for gene expression analysis using low amounts of purified, synthetic DNA in well characterized samples under identical reaction conditions. We conclude that for sample/target combinations with low levels of nucleic acids (Cq ≥ 29) and/or variable amounts of chemical and protein contaminants, ddPCR technology will produce more precise, reproducible and statistically significant results required for publication quality data. A stepwise methodology is also described to choose between these complimentary technologies to obtain the best results for any experiment.

  1. Semi-quantitative analysis of solid waste flows from nano-enabled consumer products in Europe, Denmark and the United Kingdom - Abundance, distribution and management.

    Science.gov (United States)

    Heggelund, Laura; Hansen, Steffen Foss; Astrup, Thomas Fruergaard; Boldrin, Alessio

    2016-10-01

    Many nano-enabled consumer products are known to be in the global market. At the same, little is known about the quantity, type, location etc. of the engineered nanomaterials (ENMs) inside the products. This limits the scientific investigations of potential environmental effects of these materials, and especially the knowledge of ENM behaviour and potential effects at the end-of-life stage of the products is scarce. To gain a better understanding of the end-of-life waste treatment of nano-enabled consumer product, we provide an overview of the ENMs flowing into and throughout waste systems in Europe, Denmark and the United Kingdom. Using a nanoproduct inventory (nanodb.dk), we performed a four-step analysis to estimate the most abundant ENMs and in which waste fractions they are present. We found that in terms of number of products: (i) nano silver is the most used ENM in consumer products, and (ii) plastic from used product containers is the largest waste fraction also comprising a large variety of ENMs, though possibly in very small masses. Also, we showed that the local waste management system can influence the distribution of ENMs. It is recommended that future research focus on recycling and landfilling of nano-enabled products since these compartments represent hot spots for end-of-life nanoproducts.

  2. Effectiveness of Cognitive and Transactional Analysis Group Therapy on Improving Conflict-Solving Skill

    Directory of Open Access Journals (Sweden)

    Bahram A. Ghanbari-Hashemabadi

    2012-03-01

    Full Text Available Background: Today, learning the communication skills such as conflict solving is very important. The purpose of the present study was to investigate the efficiency of cognitive and transactional analysis group therapy on improving the conflict-solving skill.Materials and Method: This study is an experimental study with pretest-posttest and control group. Forty-five clients who were referring to the counseling and psychological services center of Ferdowsi University of Mashhad were chosen based on screening method. In addition, they were randomly divided into three equal groups: control group (15 participants, cognitive experimental group (15 participants and transactional analysis group (15 participants. Conflict-solving questionnaire was used to collect data and the intervention methods were cognitive and transactional analysis group therapy that was administrated during 8 weekly two-hour sessions. Mean and standard deviation were used for data analysis in the descriptive level and One-Way ANOVA method was used at the inference level.Results: The results of the study suggest that the conflict-solving skills in the two experimental groups were significantly increased. Conclusion: The finding of this research is indicative of the fact that both cognitive and transactional analysis group therapy could be an effective intervention for improving conflict-solving skills

  3. 75 FR 70921 - Simon Property Group, Inc.; Analysis of Proposed Agreement Containing Consent Orders To Aid...

    Science.gov (United States)

    2010-11-19

    ... Simon Property Group, Inc.; Analysis of Proposed Agreement Containing Consent Orders To Aid Public... practices or unfair methods of competition. The attached Analysis to Aid Public Comment describes both the... following Analysis to Aid Public Comment describes the terms of the consent agreement, and the...

  4. The Effectiveness of Transactional Analysis Group-counseling on the Improvement of Couples’ Family Functioning

    Directory of Open Access Journals (Sweden)

    Ghorban Ali Yahyaee

    2015-06-01

    Full Text Available Background & Aims of the Study: Family functioning is among the most important factors ensuring the mental health of family members. Disorder or disturbance in family functioning would cause many psychological problems for family members. Current study intended to examine the effectiveness of transactional analysis group counseling on the improvement of couple's family functioning. Materials & Methods: The design of the study is as semi experimental research with pretest and posttest with follow up and control group. Statistical population consists all couples referring to the psychological and counseling centers of Rasht city in 2012. Samples were selected at first by available sampling method and after completing family assessment  device, and obtaining score for enter to research, were placement using random sampling method in two experimental and control groups (N = 8 couples per group. The experimental group participated in 12 sessions of group counseling based on transactional analysis and control group received no intervention. The gathered data were analyzed using covariance analysis. Results: The results show that there are significant differences between the pre-test and post test scores of the experimental group. This difference is significant at the level of 0.05. Therefore it seems that transactional group therapy improved the dimensions of family functioning in couples. Conclusions: The results indicated that transactional analysis group counseling can improve the family functioning and use this approach to working with couples is recommended.

  5. Spectral modeling of water ice-rich areas on Ceres' surface from Dawn-VIR data analysis: abundance and grain size retrieval

    Science.gov (United States)

    Raponi, Andrea; De Sanctis, Maria Cristina; Ciarniello, Mauro; Tosi, Federico; Combe, Jean-Philippe; Frigeri, Alessandro; Zambon, Francesca; Ammannito, Eleonora; Giacomo Carrozzo, Filippo; Magni, Gianfranco; Capria, Maria Teresa; Formisano, Michelangelo; Longobardo, Andrea; Palomba, Ernesto; Pieters, Carle; Russell, Christopher T.; Raymond, Carol; Dawn/VIR Team

    2016-10-01

    Dawn spacecraft orbits around Ceres since early 2015 acquiring a huge amount of data at different spatial resolutions during the several phases of the mission. VIR, the visible and InfraRed spectrometer onboard Dawn [1] allowed to detect the principal mineralogical phases present on Ceres: a large abundance of dark component, NH4-phillosilicates and carbonates.Water has been detected in small areas on Ceres' surface by the Dawn-VIR instrument. The most obvious finding is located in Oxo crater [2]. Further detections of water have been made during the Survey observation phase (1.1 km/pixel) and High-Altitude Mapping Orbit (400 m/px) [3]. During the LAMO phase (Low Altitude Mapping Orbit), the data with increased spatial resolution (100 m/px) coming from both regions have improved the detection of water, highlighting clear diagnostic water ice absorption features. In this study, we focused on spectral modeling of VIR spectra of Oxo and another crater (lon = 227°, lat 57°), near Messor crater.The Hapke radiative transfer model [4] has been applied in order to retrieve the water ice properties. We consider two types of mixtures: areal and intimate mixing. In areal mixing, the surface is modelled as patches of pure water ice, with each photon scattered within one patch. In intimate mixing, the particles of water ice are in contact with particles of the dark terrain, and both are involved in the scattering of a single photon. The best fit with the measured spectra has been derived with the areal mixture. The water ice abundance obtained is up to 15-20% within the field of view, and the grain size retrieved is of the order of 100-200 μm. Phyllosilicates and carbonates, which are ubiquitous on Ceres surface [5], have been also detected and modeled in correspondence with the icy regions. The water ice is typically located near and within the shadows projected by the crater rims. Further analysis is required to study the thermal state of the ice and its origin

  6. Abundance estimation and Conservation Biology

    Directory of Open Access Journals (Sweden)

    Nichols, J. D.

    2004-06-01

    our attention should be focused on relationships between demographic processes such as survival and recruitment, the two quantities responsible for changes in abundance, rather than simply on the magnitudes of these quantities. They describe a type of Jolly–Seber capture–recapture model that permits inference about the underlying relationship between per capita recruitment rates and survival rates (Link & Barker, this volume. Implementation used Bayesian Markov Chain Monte Carlo methods and appeared to work well, yielding inferences about the relationship between recruitment and survival that were robust to selection of prior distribution. We believe that readers will find their arguments compelling, and we expect to see increased use of hierarchical modeling approaches in capture–recapture and related fields. Otto (presentation without paper also recommended use of hierarchical models in analysis of multiple data sources dealing with population dynamics of North American mallards. He integrated survival inferences from ringing data, abundance information from aerial survey data, and recruitment information based on age ratios from a harvest survey. He used a Leslie matrix population projection model as an integrating framework and obtained estimates of breeding population size using all data.Otto’s approach also permitted inference about biases in estimated quantities. As with the work of Link & Barker (2004, we find Otto’s recommendation to use hierarchical models to integrate data from multiple sources to be very compelling. Alisauskas et al. (2004 report results of an analysis of capture–recapture data for a askatchewan population of white–winged scoters. They used the approach of Pradel (1996 to estimate population growth rate (See the PDF directly. Estimates for 1975–1985 were quite low, but estimates for the recent period, 2000–2003,increased to values > 1. Parameter estimates for seniority, survival and per capita recruitment (Pradel, 1996

  7. Abundance estimation and conservation biology

    Science.gov (United States)

    Nichols, J.D.; MacKenzie, D.I.

    2004-01-01

    should be focused on relationships between demographic processes such as survival and recruitment, the two quantities responsible for changes in abundance, rather than simply on the magnitudes of these quantities. They describe a type of Jolly–Seber capture–recapture model that permits inference about the underlying relationship between per capita recruitment rates and survival rates (Link & Barker, this volume). Implementation used Bayesian Markov Chain Monte Carlo methods and appeared to work well, yielding inferences about the relationship between recruitment and survival that were robust to selection of prior distribution. We believe that readers will find their arguments compelling, and we expect to see increased use of hierarchical modeling approaches in capture–recapture and related fields. Otto (presentation without paper) also recommended use of hierarchical models in analysis of multiple data sources dealing with population dynamics of North American mallards. He integrated survival inferences from ringing data, abundance information from aerial survey data, and recruitment information based on age ratios from a harvest survey. He used a Leslie matrix population projection model as an integrating framework and obtained estimates of breeding population size using all data.Otto’s approach also permitted inference about biases in estimated quantities. As with the work of Link & Barker (2004), we find Otto’s recommendation to use hierarchical models to integrate data from multiple sources to be very compelling. Alisauskas et al. (2004) report results of an analysis of capture–recapture data for a askatchewan population of white–winged scoters. They used the approach of Pradel (1996) to estimate population growth rate (See the PDF) directly. Estimates for 1975–1985 were quite low, but estimates for the recent period, 2000–2003,increased to values > 1. Parameter estimates for seniority, survival and per capita recruitment (Pradel, 1996) led to the

  8. THE STRUCTURE ANALYSIS OF POPULATION BY AGE GROUPS IN THE RURAL AREAS OF BUCOVINA

    Directory of Open Access Journals (Sweden)

    NICOLETA ILEANA MORAR (BUMBU

    2015-12-01

    Full Text Available The structure analysis of population by age groups in the rural area of Bucovina desires to create a recent image of the rural population by age groups in the region of Bucovina , provided that after the year 2000 have occurred socio – economic changes with repercussions on the demographic component. The structure analysis by age group will be based on the share of population indicators on the major age groups, the share of population by age and quinquennial gender illustrated by age pyramid, the index of demographic aging and age-dependency ratio. This study is definitely needed in forecasting future regional development objectives and measures.

  9. Deuterium abundance and cosmology

    CERN Document Server

    Vidal-Madjar, A; Lemoine, M

    1996-01-01

    We review the status of the measurements of the deuterium abundance from the local interstellar medium to the solar system and high redshifts absorbers toward quasars. We present preliminary results toward a white dwarf and a QSO. We conclude that the deuterium evolution from the Big-Bang to now is still not properly understood.

  10. Chemical, physical, zooplankton abundance, and other data collected using fluorometer, laboratory analysis, visual analysis, and zooplankton net casts from multiple ships from the Coastal Waters of California and North Pacific Ocean as part of the California Cooperative Fisheries Investigation (CALCOFI) project, from 01 January 1951 to 28 August 1993 (NODC Accession 9400052)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Chemical, physical, zooplankton abundance, and other data were collected using fluorometer, laboratory analysis, visual analysis, and zooplankton net casts from...

  11. Late Embryogenesis Abundant (LEA proteins in legumes

    Directory of Open Access Journals (Sweden)

    Marina eBattaglia

    2013-06-01

    Full Text Available Plants are exposed to different external conditions that affect growth, development, and productivity. Water deficit is one of these adverse conditions caused by drought, salinity, and extreme temperatures. Plants have developed different responses to prevent, ameliorate or repair the damage inflicted by these stressful environments. One of these responses is the activation of a set of genes encoding a group of hydrophilic proteins that typically accumulate to high levels during seed dehydration, at the last stage of embryogenesis, hence named Late Embryogenesis Abundant (LEA proteins. LEA proteins also accumulate in response to water limitation in vegetative tissues, and have been classified in seven groups based on their amino acid sequence similarity and on the presence of distinctive conserved motifs. These proteins are widely distributed in the plant kingdom, from ferns to angiosperms, suggesting a relevant role in the plant response to this unfavorable environmental condition. In this review, we analyzed the LEA proteins from those legumes whose complete genomes have been sequenced such as Phaseolus vulgaris, Glycine max, Medicago truncatula, Lotus japonicus, Cajanus cajan and Cicer arietinum. Considering their distinctive motifs, LEA proteins from the different groups were identified, and their sequence analysis allowed the recognition of novel legume specific motifs. Moreover, we compile their transcript accumulation patterns based on publicly available data. In spite of the limited information on these proteins in legumes, the analysis and data compiled here confirms the high correlation between their accumulation and water deficit, reinforcing their functional relevance under this detrimental conditions.

  12. Facebook and Health Information: Content Analysis of Groups Related to Schizophrenia.

    Science.gov (United States)

    Athanasopoulou, Christina; Sakellari, Evanthia

    2015-01-01

    Facebook Groups is a space for connecting people with common interests. People with a psychiatric diagnosis use social networking sites. However Facebook Groups related to schizophrenia have not been investigated before. We aimed to examine Facebook Groups related to schizophrenia. Deductive content analysis was applied. Out of the included groups (N=32), the majority's principal objective was awareness creation (n=11, 34%) and support to those with schizophrenia and their caregivers (n=9, 28%). Monitoring the Facebook Groups' content related to schizophrenia and other mental disorders is essential, since it could be an important communication and support platform for people with the disorder and their caregivers.

  13. A geometrical formulation of the renormalization group method for global analysis

    CERN Document Server

    Kunihiro, T

    1995-01-01

    On the basis of the classical theory of envelope,we formulate the renormalization group (RG) method for global analysis, recently proposed by Goldenfeld et al. It is clarified why the RG equation improves things.

  14. Ion-selective electrodes in organic elemental and functional group analysis: a review

    Energy Technology Data Exchange (ETDEWEB)

    Selig, W.

    1977-11-08

    The literature on the use of ion-selective electrodes in organic elemental and functional group analysis is surveyed in some detail. The survey is complete through Chemical Abstracts, Vol. 83 (1975). 40 figures, 52 tables, 236 references.

  15. Potential retention effect at fish farms boosts zooplankton abundance

    Science.gov (United States)

    Fernandez-Jover, D.; Toledo-Guedes, K.; Valero-Rodríguez, J. M.; Fernandez-Gonzalez, V.; Sanchez-Jerez, P.

    2016-11-01

    Coastal aquaculture activities influence wild macrofauna in natural environments due to the introduction of artificial structures, such as floating cages, that provide structural complexity in the pelagic system. This alters the abundance and distribution of the affected species and also their feeding behaviour and diet. Despite this, the effects of coastal aquaculture on zooplankton assemblages and the potential changes in their abundance and distribution remain largely unstudied. Traditional plankton sampling hauls between the farm mooring systems entail some practical difficulties. As an alternative, light traps were deployed at 2 farms in the SW Mediterranean during a whole warm season. Total zooplankton capture by traps at farms was higher than at control locations on every sampling night. It ranged from 3 to 10 times higher for the taxonomic groups: bivalvia, cladocera, cumacea, fish early-life-stages, gastropoda, polychaeta and tanaidacea; 10-20 times higher for amphipoda, chaetognatha, isopoda, mysidacea and ostracoda, and 22 times higher for copepoda and the crustacean juvenile stages zoea and megalopa. Permutational analysis showed significant differences for the most abundant zooplankton groups (copepoda, crustacean larvae, chaetognatha, cladocera, mysidacea and polychaeta). This marked incremental increase in zooplankton taxa at farms was consistent, irrespective of the changing environmental variables registered every night. Reasons for the greater abundance of zooplankton at farms are discussed, although results suggest a retention effect caused by cage structures rather than active attraction through physical or chemical cues.

  16. A catalogue of helium abundance indicators from globular cluster photometry

    Science.gov (United States)

    Sandquist, Eric L.

    2000-04-01

    We present a survey of helium abundance indicators derived from a comprehensive study of globular cluster photometry in the literature. For each of the three indicators used, we conduct a thorough error analysis, and identify systematic errors in the computational procedures. For the population ratio RNHBNRGB, we find that there is no evidence of a trend with metallicity, although there appears to be real scatter in the values derived. Although this indicator is the one best able to provide useful absolute helium abundances, the mean value is Y~0.20, indicating the probable presence of additional systematic error. For the magnitude difference from the horizontal branch to the main sequence Δ and the RR Lyrae mass-luminosity exponent A, it is only possible to determine relative helium abundances reliably. This is due to continuing uncertainties in the absolute metallicity scale for Δ, and uncertainty in the RR Lyrae temperature scale for A. Both indicators imply that the helium abundance is approximately constant as a function of [Fe/H]. According to the A indicator, both Oosterhoff I and II group clusters have constant values independent of [Fe/H] and horizontal branch type. In addition, the two groups have slopes dlog/d[Fe/H] that are consistent with each other, but significantly smaller than the slope for the combined sample.

  17. Pedigree analysis for the genetic management of group-living species.

    Science.gov (United States)

    Jiménez-Mena, Belén; Schad, Kristine; Hanna, Nick; Lacy, Robert C

    2016-05-01

    Captive breeding programs are an important tool for the conservation of endangered species. These programs are commonly managed using pedigrees containing information about the history of each individual's family, such as breeding pairs and parentage. However, there are some species that are kept in groups where it is hard to distinguish between particular individuals within the group, making it very difficult to record any information at an individual level. Currently, software and methods commonly used for registering and analyzing pedigrees to help manage populations at an individual level are not adequate for managing these group-living species. Therefore, there is a need to further develop these tools and methodologies for pedigree analysis to better manage group-living species. PMx is a program used for the management of ex situ populations in zoos and aquariums. We adapted the pedigree analysis method implemented in PMx to analyze pedigrees (records of descendant lineages) of group-living species. In addition, we developed a group pedigree data entry sheet and group2PMx, a converter program that enables group datasets to be imported into PMx. We show how pedigree analysis of a group-living species can be used for population management using the studbook of the endangered Texas blind cave salamander Eurycea rathbuni. Such analyses of the pedigree of groups can improve the management of group-living species in ex situ breeding programs. Firstly, it enables better management decisions based on more accurate genetic measures between groups, allowing for greater control of inbreeding. Secondly, it can improve the conditions in which group-living species are held by adapting husbandry practices to better reflect conditions of these species living in the wild. The use of the spreadsheet and group2PMx extends the application of PMx, allowing conservation managers and other institutions outside the zoo and aquarium community to easily import and analyze their

  18. Systematic analysis of finite family symmetry groups and their application to the lepton sector

    CERN Document Server

    Ludl, Patrick Otto

    2009-01-01

    In this work we will investigate Lagrangians of the standard model extended by three right-handed neutrinos, and the consequences of invariance under finite groups G for lepton masses and mixing matrices are studied. The main part of this thesis is the systematic analysis of finite subgroups of SU(3). The analysis of these groups may act as a toolkit for future model building.

  19. Interpretive focus groups: a participatory method for interpreting and extending secondary analysis of qualitative data

    Directory of Open Access Journals (Sweden)

    Michelle Redman-MacLaren

    2014-08-01

    Full Text Available Background: Participatory approaches to qualitative research practice constantly change in response to evolving research environments. Researchers are increasingly encouraged to undertake secondary analysis of qualitative data, despite epistemological and ethical challenges. Interpretive focus groups can be described as a more participative method for groups to analyse qualitative data. Objective: To facilitate interpretive focus groups with women in Papua New Guinea to extend analysis of existing qualitative data and co-create new primary data. The purpose of this was to inform a transformational grounded theory and subsequent health promoting action. Design: A two-step approach was used in a grounded theory study about how women experience male circumcision in Papua New Guinea. Participants analysed portions or ‘chunks’ of existing qualitative data in story circles and built upon this analysis by using the visual research method of storyboarding. Results: New understandings of the data were evoked when women in interpretive focus groups analysed the data ‘chunks’. Interpretive focus groups encouraged women to share their personal experiences about male circumcision. The visual method of storyboarding enabled women to draw pictures to represent their experiences. This provided an additional focus for whole-of-group discussions about the research topic. Conclusions: Interpretive focus groups offer opportunity to enhance trustworthiness of findings when researchers undertake secondary analysis of qualitative data. The co-analysis of existing data and co-generation of new data between research participants and researchers informed an emergent transformational grounded theory and subsequent health promoting action.

  20. The Educational Gradient in Intermarriage: A Comparative Analysis of Immigrant Groups in the United States

    Science.gov (United States)

    Kalmijn, Matthijs

    2012-01-01

    A common claim in the literature is that higher-educated persons are more likely to marry outside their ethnic/racial group than lower-educated persons. We re-examine this "educational gradient" with a multilevel analysis of 46 immigrant groups in the Current Population Survey. We find that there are positive effects not only of individual…

  1. Transactional Analysis and Gestalt Therapy Used in Conjunction with Group Counseling for Married Couples

    Science.gov (United States)

    Sisson, P. Joe; And Others

    1977-01-01

    This study investigated the effects of combining Transactional Analysis and Gestalt therapy with group counseling for married couples. Six treatment couples and 12 control group members were pre/post administered the Tennessee Self-Concept Scale to assess changes in the level of their self-esteem. There were some significant results. (Author/JEL)

  2. A Behavior Analysis of Individuals' Use of the Fairness Heuristic when Interacting with Groups and Organizations

    Science.gov (United States)

    Goltz, Sonia M.

    2013-01-01

    In the present analysis the author utilizes the groups as patches model (Goltz, 2009, 2010) to extend fairness heuristic theory (Lind, 2001) in which the concept of fairness is thought to be a heuristic that allows individuals to match responses to consequences they receive from groups. In this model, individuals who are reviewing possible groups…

  3. The Effect of Goal Setting on Group Performance: A Meta-Analysis

    Science.gov (United States)

    Kleingeld, Ad; van Mierlo, Heleen; Arends, Lidia

    2011-01-01

    Updating and extending the work of O'Leary-Kelly, Martocchio, and Frink (1994), with this meta-analysis on goal setting and group performance we show that specific difficult goals yield considerably higher group performance compared with nonspecific goals (d = 0.80 plus or minus 0.35, k = 23 effect sizes). Moderately difficult and easy goals were…

  4. MULTIRESOLUTION ANALYSIS, SELF-SIMILAR TILINGS AND HAAR WAVELETS ON THE HEISENBERG GROUP

    Institute of Scientific and Technical Information of China (English)

    Liu Heping; Liu Yu; Wang Haihui

    2009-01-01

    In this article, the properties of multiresolution analysis and self-similar tilings on the Heisenberg group are studied. Moreover, we establish a theory to construct an orthonormal Haar wavelet base in L~2(H~d) by using self-similar tilings for the acceptable dilations on the Heisenberg group.

  5. Fast and high-resolution stereochemical analysis by nonuniform sampling and covariance processing of anisotropic natural abundance 2D 2H NMR datasets.

    Science.gov (United States)

    Lafon, Olivier; Hu, Bingwen; Amoureux, Jean-Paul; Lesot, Philippe

    2011-06-01

    Natural abundance deuterium (NAD) 2D NMR spectroscopy using chiral or achiral liquid crystals is an efficient analytical tool for the stereochemical analysis of enantio- or diastereomers by the virtue of proton-to-deuterium substitution. In particular, it allows the measurement of enantiopurity of organic synthetic molecules or the determination of the natural isotopic (1)H/(2)H fractionation in biological molecules, such as fatty acid methyl esters (FAME). So far, the NAD 2D spectra of solutes were acquired by using uniform sampling (US) and processed by conventional 2D Fourier transform (FT), which could result in long measurement times for medium-sized analytes or low solute concentrations. Herein, we demonstrate that this conventional approach can be advantageously replaced by nonuniform sampling (NUS) processed by covariance (Cov) transform. This original spectral reconstruction provides a significant enhancement of spectral resolution, as well as a reduction of measurement times. The application of Cov to NUS data has required the introduction of a regularization procedure in the time domain for the indirect dimension. The analytical potential of combining Cov and NUS is demonstrated by measuring the enantiomeric excess of a scalemic mixture of 2-ethyloxirane and by determining the diastereomeric excess of methyl vernoleate, a natural FAME. These two organic compounds were aligned in a polypeptide (poly(γ-benzyl-L-glutamate)) mesophase. In the case of NAD 2D NMR spectroscopy, we show that Cov and NUS methods allow a decrease in measurement time by a factor of two compared with Cov applied to US data and a factor of four compared with FT applied to US data.

  6. Analysis of Caesarean-Section rates according to Robson's ten group classification system and evaluating the indications within the groups

    Directory of Open Access Journals (Sweden)

    Amita Ray

    2017-01-01

    Full Text Available Background: With Caesarean sections on the rise WHO proposes that health care facilities use the Robson's 10 group classification system to audit their C-sections rates. This classification would help understand the internal structure of the CS rates at individual health facilities identify key population groups, indications in each group and formulate strategies to reduce these rates. Methods: This was a cross sectional study for a period of 24 months at a tertiary care hospital in a tribal area of Kerala South India. Women who delivered during this period were included and classified into 10 Robson's classes and percentages were calculated for the overall rate, the representation of groups, contribution of groups and Caesarean percentage in each group. Results: Highest contribution was by Group 5 and Group 2. Together these two groups contributed to 38% of the total Caesareans. Followed by Group 8 and 10. All four added contributed to 63% of the section rate The least contribution was by Group 3. Groups 6, 7 and 9 by themselves did not contribute much but within their groups had a 100% C-Section rate. Conclusions: The contribution of the various Robson's Group to the absolute C-Section rates needs to be looked into. Reducing primary section rates, adequate counselling and encouraging for VBAC, changing the norms for dystocia and non-reassuring fetal status, training and encouraging obstetricians to perform versions when not contraindicated could reduce the contribution of Robson's groups towards the absolute C-Section rates.

  7. How Chinese are entrepreneurial strategies of ethnic Chinese business groups in Southeast Asia? : a multifaceted analysis of the Salim Group of Indonesia

    NARCIS (Netherlands)

    Dieleman, Maria Helena

    2007-01-01

    Family business groups are ubiquitous in most emerging markets. This book provides a richly documented analysis of the strategy of the Salim Group, one of the largest family conglomerates in Southeast Asia. It argues that the strategy of this group oscillated irregularly between a business model bui

  8. How Chinese are entrepreneurial strategies of ethnic Chinese business groups in Southeast Asia? : a multifaceted analysis of the Salim Group of Indonesia

    NARCIS (Netherlands)

    Dieleman, Maria Helena

    2007-01-01

    Family business groups are ubiquitous in most emerging markets. This book provides a richly documented analysis of the strategy of the Salim Group, one of the largest family conglomerates in Southeast Asia. It argues that the strategy of this group oscillated irregularly between a business model

  9. Qualitative analysis of experiences of members of a psychoeducational assertiveness group.

    Science.gov (United States)

    Argyrakouli, Effi; Zafiropoulou, Maria

    2007-04-01

    This study describes qualitatively a psychoeducational assertiveness intervention for 20 women's perceptions of positive and negative experiences, undertaken to identify whether therapeutic mechanisms operating in group therapy as described by Yalom might be inferred. There were 14 90-min. weekly sessions organized around educational material. Two groups were conducted with 10 university women each (M= 20.9 yr., SD= 1.9). Qualitative analysis of the 20 interviews identified five of Yalom's therapeutic mechanisms, namely, self-understanding, universality, acceptance, catharsis, and self-disclosure. The positive experiences were group cohesiveness, self-understanding, self-disclosure, positive views about the self and learning, and cognitive benefits. Self-disclosing at the early stages of group development was the most frequently reported negative experience or difficulty in the group. Although participants stated they improved interpersonal communication skills, analysis suggested the cultural context was an important mediator of assertive behavior.

  10. Is in-group bias culture-dependent? A meta-analysis across 18 societies.

    Science.gov (United States)

    Fischer, Ronald; Derham, Crysta

    2016-01-01

    We report a meta-analysis on the relationship between in-group bias and culture. Our focus is on whether broad macro-contextual variables influence the extent to which individuals favour their in-group. Data from 21,266 participants from 18 societies included in experimental and survey studies were available. Using Hofstede's (1980) and Schwartz (2006) culture-level predictors in a 3-level mixed-effects meta-analysis, we found strong support for the uncertainty-reduction hypothesis. An interaction between Autonomy and real vs artificial groups suggested that in low autonomy contexts, individuals show greater in-group bias for real groups. Implications for social identity theory and intergroup conflict are outlined.

  11. Two semi-automated computational approaches for spectroscopic analysis of stellar photospheres: detailed characterization at high resolution and abundance determination at medium resolution

    CERN Document Server

    Milone, Andre; Sansom, Anne; Sanchez-Blazquez, Patricia

    2013-01-01

    We report on two distinct computational approaches to self-consistently measure photospheric properties of large samples of stars. Both procedures consist of a set of several semi-integrated tasks based on shell and Python scripts, which efficiently run either our own codes or open source software commonly adopted by the astronomical community. One approach aims to derive the main stellar photospheric parameters and abundances of a few elements by analysing high-resolution spectra from a given public library homogeneously constructed. The other one is applied to recover the abundance of a single element in stars with known photospheric parameters by using mid-resolution spectra from another open homogeneous database and calibrating derived abundances. Both semi-automated computational approaches provide homogeneity and objectivity to every step of the process and represent a fast way to reach partial and final results as well as to estimate measurement errors, making possible to systematically evaluate and im...

  12. Turnover and heterogeneity in top management networks - A demographic analysis of two Swedish business groups

    Directory of Open Access Journals (Sweden)

    Collin, S. & Umans, T.

    2008-09-01

    Full Text Available A theory based on the demography of top management teams is used to explain membership turnover in two Swedish business groups, network analysis being used to define group membership. The results suggest these business groups possess a combination of financial and industrial experience as a group resource and the socialising strategy of control as a force counteracting the conflict-producing force of heterogeneity. An organisational demographic perspective focusing on opposing forces of heterogeneity and homogeneity is developed. It is shown that the perspective can be applied both to formal organisations and to informal ones such as networks.

  13. An Integrated Approach with Group Decision-Making for Strategy Selection in SWOT Analysis

    OpenAIRE

    İhsan Yüksel

    2012-01-01

    The main aim of this study was to improve the analytical dimension of SWOT (strengths, weaknesses, opportunities and threats) analysis with group decision-making, which underlines the analysis of internal and external environments that in turn, will improve the definition of corporate strategy within the strategic planning process. The main issue of the study was how to select the most appropriate strategy by taking into consideration different effects of each factor of SWOT analysis on strat...

  14. Famers’ satisfaction with group market arrangements as a measure of group market performance: A transaction cost analysis of Non Timber Forest Products’ producer groups in Cameroon

    NARCIS (Netherlands)

    Foundjem Tita, D.; Haese, D' M.; Degrande, A.; Tchoundjeu, Z.; Damme, Van P.

    2011-01-01

    This paper evaluates the performance of Non Timber Forest Product (NTFP) group market initiatives by examining whether these groups meet the objectives for which they were created. Group marketing has often been cited as one way through which farmers can increase their access to markets by improving

  15. Using Cluster Analysis to Group Countries for Cost-Effectiveness Analysis: An Application to Sub-Saharan Africa.

    Science.gov (United States)

    Russell, Louise B; Bhanot, Gyan; Kim, Sun-Young; Sinha, Anushua

    2017-08-01

    To explore the use of cluster analysis to define groups of similar countries for the purpose of evaluating the cost-effectiveness of a public health intervention-maternal immunization-within the constraints of a project budget originally meant for an overall regional analysis. We used the most common cluster analysis algorithm, K-means, and the most common measure of distance, Euclidean distance, to group 37 low-income, sub-Saharan African countries on the basis of 24 measures of economic development, general health resources, and past success in public health programs. The groups were tested for robustness and reviewed by regional disease experts. We explored 2-, 3- and 4-group clustering. Public health performance was consistently important in determining the groups. For the 2-group clustering, for example, infant mortality in Group 1 was 81 per 1,000 live births compared with 51 per 1,000 in Group 2, and 67% of children in Group 1 received DPT immunization compared with 87% in Group 2. The experts preferred four groups to fewer, on the ground that national decision makers would more readily recognize their country among four groups. Clusters defined by K-means clustering made sense to subject experts and allowed a more detailed evaluation of the cost-effectiveness of maternal immunization within the constraint of the project budget. The method may be useful for other evaluations that, without having the resources to conduct separate analyses for each unit, seek to inform decision makers in numerous countries or subdivisions within countries, such as states or counties.

  16. First Stellar Abundances in the Dwarf Irregular Galaxy IC 1613

    Science.gov (United States)

    Tautvaišienė, Gražina; Geisler, Doug; Wallerstein, George; Borissova, Jura; Bizyaev, Dmitry; Pagel, Bernard E. J.; Charbonnel, Corinne; Smith, Verne

    2007-12-01

    Chemical abundances in three M supergiants in the Local Group dwarf irregular galaxy IC 1613 have been determined using high-resolution spectra obtained with the UVES spectrograph on the ESO 8.2 m Kueyen telescope. A detailed synthetic-spectrum analysis has been used to determine the atmospheric parameters and abundances of O, Na, Mg, Al, Si, Ca, Sc, Ti, Cr, Fe, Co, Ni, La, and Eu. We find the overall metallicity of the stars to be [Fe/H] = -0.67 ± 0.09 and the age 9-13 Myr, which is in excellent agreement with the present-day values in the age-metallicity relationship model of IC 1613 by Skillman et al. We have found that the three supergiants investigated have a mean [α/Fe] equal to about -0.1, which is lower than seen in Galactic stars at the same metallicity and is in agreement with the results obtained in other dwarf irregular galaxies. The oxygen abundances are in agreement with the upper values of the nebular oxygen determinations in IC 1613. The abundance ratios of s- and r-process elements to iron are enhanced relative to solar by about 0.3 dex. The abundance pattern of the elements studied is similar to that of the Small Magellanic Cloud, except for Co and Ni, which are underabundant in the SMC. The observed elemental abundances are generally in very good agreement with the recent chemical evolution model of Yuk and Lee. Based on observations collected with the Very Large Telescope and the 2.2 m Telescope of the European Southern Observatory within the Observing Programs 70.B-0361(A) and 072.D-0113(D).

  17. Abundances of neutron-capture elements in the Hot Extreme-Helium Stars V1920 Cygni and HD 124448

    CERN Document Server

    Pandey, G; Rao, N K; Jeffery, C S; Pandey, Gajendra; Lambert, David L.

    2004-01-01

    Analysis of HST STIS ultraviolet spectra of two hot extreme helium stars (EHes): V1920 Cyg and HD 124448 provide the first measurements of abundances of neutron-capture elements for EHes. Although the two stars have similar abundances for elements up through the iron-group, they differ strikingly in their abundances of heavier elements: V1920 Cyg is enriched by a factor of 30 in light neutron-capture elements (Y/Fe, Zr/Fe) relative to HD 124448. These differences in abundances of neutron-capture elements among EHes mirrors that exhibited by the RCrB stars, and is evidence supporting the view that there is an evolutionary connection between these two groups of hydrogen-deficient stars. Also, the abundances of Y and Zr in V1920 Cyg provide evidence that at least one EHe star went through a s-process synthesis episode in its earlier evolution.

  18. Radial Velocity Prospects Current and Future: A White Paper Report prepared by the Study Analysis Group 8 for the Exoplanet Program Analysis Group (ExoPAG)

    CERN Document Server

    Plavchan, Peter; Gaudi, Scott; Crepp, Justin; Xavier, Dumusque; Furesz, Gabor; Vanderburg, Andrew; Blake, Cullen; Fischer, Debra; Prato, Lisa; White, Russel; Makarov, Valeri; Marcy, Geoff; Stapelfeldt, Karl; Haywood, Raphaëlle; Collier-Cameron, Andrew; Quirrenbach, Andreas; Mahadevan, Suvrath; Anglada, Guillem; Muirhead, Philip

    2015-01-01

    [Abridged] The Study Analysis Group 8 of the NASA Exoplanet Analysis Group was convened to assess the current capabilities and the future potential of the precise radial velocity (PRV) method to advance the NASA goal to "search for planetary bodies and Earth-like planets in orbit around other stars.: (U.S. National Space Policy, June 28, 2010). PRVs complement other exoplanet detection methods, for example offering a direct path to obtaining the bulk density and thus the structure and composition of transiting exoplanets. Our analysis builds upon previous community input, including the ExoPlanet Community Report chapter on radial velocities in 2008, the 2010 Decadal Survey of Astronomy, the Penn State Precise Radial Velocities Workshop response to the Decadal Survey in 2010, and the NSF Portfolio Review in 2012. The radial-velocity detection of exoplanets is strongly endorsed by both the Astro 2010 Decadal Survey "New Worlds, New Horizons" and the NSF Portfolio Review, and the community has recommended robust...

  19. Population Analysis of Adverse Events in Different Age Groups Using Big Clinical Trials Data.

    Science.gov (United States)

    Luo, Jake; Eldredge, Christina; Cho, Chi C; Cisler, Ron A

    2016-10-17

    Understanding adverse event patterns in clinical studies across populations is important for patient safety and protection in clinical trials as well as for developing appropriate drug therapies, procedures, and treatment plans. The objective of our study was to conduct a data-driven population-based analysis to estimate the incidence, diversity, and association patterns of adverse events by age of the clinical trials patients and participants. Two aspects of adverse event patterns were measured: (1) the adverse event incidence rate in each of the patient age groups and (2) the diversity of adverse events defined as distinct types of adverse events categorized by organ system. Statistical analysis was done on the summarized clinical trial data. The incident rate and diversity level in each of the age groups were compared with the lowest group (reference group) using t tests. Cohort data was obtained from ClinicalTrials.gov, and 186,339 clinical studies were analyzed; data were extracted from the 17,853 clinical trials that reported clinical outcomes. The total number of clinical trial participants was 6,808,619, and total number of participants affected by adverse events in these trials was 1,840,432. The trial participants were divided into eight different age groups to support cross-age group comparison. In general, children and older patients are more susceptible to adverse events in clinical trial studies. Using the lowest incidence age group as the reference group (20-29 years), the incidence rate of the 0-9 years-old group was 31.41%, approximately 1.51 times higher (P=.04) than the young adult group (20-29 years) at 20.76%. The second-highest group is the 50-59 years-old group with an incidence rate of 30.09%, significantly higher (Pdata suggest that age-associated adverse events should be considered in planning, monitoring, and regulating clinical trials.

  20. Quantifying mineral abundances of complex mixtures by coupling spectral deconvolution of SWIR spectra (2.1–2.4 µm) and regression tree analysis

    NARCIS (Netherlands)

    Mulder, V.L.; Plötze, M.; Bruin, de S.; Schaepman, M.E.; Mavris, C.; Kokaly, R.F.; Egli, M.

    2013-01-01

    This paper presents a methodology for assessing mineral abundances of mixtures having more than two constituents using absorption features in the 2.1–2.4 µm wavelength region. In the first step, the absorption behaviour of mineral mixtures is parameterised by exponential Gaussian optimisation. Next,

  1. Abundance correlations in mildly metal-poor stars

    CERN Document Server

    Jehin, E; Neuforge, C; Noels, A; Parmentier, G; Thoul, A A

    1999-01-01

    Accurate relative abundances have been obtained for a sample of 21 mildly metal-poor stars from the analysis of high resolution and high signal-to-noise spectra. With these accurate results, correlations between relative abundances have been searched for, with a special emphasis on the neutron capture elements. This analysis shows that the r elements are closely correlated to the alpha elements, which is in agreement with the generally accepted idea that the r-process takes place during the explosion of massive stars. The situation is more complex as far as the s elements are concerned. Their relation with the alpha elements is not linear. In a first group of stars, the relative abundance of the s elements increases only slightly with the alpha elements overabundance until the latter reaches a maximum value. For the second group, the s elements show a rather large range of enhancement and a constant (and maximum) value of the alpha elements overabundance. This peculiar behaviour leads us to distinguish betwee...

  2. The Hamburg/ESO R-process Enhanced Star survey (HERES) IV. Detailed abundance analysis and age dating of the strongly r-process enhanced stars CS 29491-069 and HE 1219-0312

    CERN Document Server

    Hayek, W; Christlieb, N; Eriksson, K; Korn, A J; Barklem, P S; Hill, V; Beers, T C; Farouqi, K; Pfeiffer, B; Kratz, K -L

    2009-01-01

    We report on a detailed abundance analysis of two strongly r-process enhanced, very metal-poor stars newly discovered in the HERES project, CS 29491-069 ([Fe/H]=-2.51, [r/Fe]=+1.1) and HE 1219-0312 ([Fe/H]=-2.96, [r/Fe]=+1.5). The analysis is based on high-quality VLT/UVES spectra and MARCS model atmospheres. We detect lines of 15 heavy elements in the spectrum of CS 29491-069, and 18 in HE 1219-0312; in both cases including the Th II 4019 {\\AA} line. The heavy-element abundance patterns of these two stars are mostly well-matched to scaled solar residual abundances not formed by the s-process. We also compare the observed pattern with recent high-entropy wind (HEW) calculations, which assume core-collapse supernovae of massive stars as the astrophysical environment for the r-process, and find good agreement for most lanthanides. The abundance ratios of the lighter elements strontium, yttrium, and zirconium, which are presumably not formed by the main r-process, are reproduced well by the model. Radioactive da...

  3. Flare Plasma Iron Abundance

    Science.gov (United States)

    Dennis, Brian R.; Dan, Chau; Jain, Rajmal; Schwartz, Richard A.; Tolbert, Anne K.

    2008-01-01

    The equivalent width of the iron-line complex at 6.7 keV seen in flare X-ray spectra suggests that the iron abundance of the hottest plasma at temperatures >approx.10 MK may sometimes be significantly lower than the nominal coronal abundance of four times the photospheric value that is commonly assumed. This conclusion is based on X-ray spectral observations of several flares seen in common with the Ramaty High Energy Solar Spectroscopic Imager (RHESSI) and the Solar X-ray Spectrometer (SOXS) on the second Indian geostationary satellite, GSAT-2. The implications of this will be discussed as it relates to the origin of the hot flare plasma - either plasma already in the corona that is directly heated during the flare energy release process or chromospheric plasma that is heated by flare-accelerated particles and driven up into the corona. Other possible explanations of lower-than-expected equivalent widths of the iron-line complex will also be discussed.

  4. Molecular analysis of multiple isolates of the major serotypes of group B streptococci.

    OpenAIRE

    Fasola, E; Livdahl, C; Ferrieri, P

    1993-01-01

    Serotyping of clinical isolates is a widely used technique for epidemiologic study of group B streptococcal infections. However, serotyping cannot definitively determine epidemiologically related or unrelated isolates. We investigated the use of restriction endonuclease analysis (REA) with both conventional agarose gel electrophoresis (AGE) and pulsed-field gel electrophoresis (PFGE) in 50 isolates of the major serotypes of group B streptococci. Single digestion with HindIII and HaeIII and do...

  5. Group Analysis of Nonlinear Internal Waves in Oceans. II: The symmetries and rotationally invariant solution

    CERN Document Server

    Ibragimov, Nail H; Kovalev, Vladimir F

    2011-01-01

    74J30The maximal group of Lie point symmetries of a system of nonlinear equations used in geophysical fluid dynamics is presented. The Lie algebra of this group is infinite-dimensional and involves three arbitrary functions of time. The invariant solution under the rotation and dilation is constructed. Qualitative analysis of the invariant solution is provided and the energy of this solution is presented.

  6. The Group's Absence Norm and Commitment to the Group as Predictors of Group Member Absence in the Next Session: An Actor-Partner Analysis

    Science.gov (United States)

    Kivlighan, Dennis M., Jr.; Kivlighan, D. Martin, III; Cole, Odessa Dorian

    2012-01-01

    The group's absence norm, a construct from the applied psychology literature, was used to examine session absences in personal growth groups. Rather than examining the absence norm statically, we modeled it dynamically as a time-varying covariate (Tasca et al., 2010). We also examined moderation by modeling the interaction of the absence norm and…

  7. ABO blood group system and gastric cancer: a case-control study and meta-analysis.

    Science.gov (United States)

    Wang, Zhiwei; Liu, Lei; Ji, Jun; Zhang, Jianian; Yan, Min; Zhang, Jun; Liu, Bingya; Zhu, Zhenggang; Yu, Yingyan

    2012-10-17

    This study focuses on the association between the ABO blood group system and the risk of gastric cancer or Helicobacter pylori infection. The data for the ABO blood group was collected from 1045 cases of gastric cancer, whereby the patient underwent a gastrectomy in Ruijin Hospital, Shanghai. The information on the ABO blood group from 53,026 healthy blood donors was enrolled as control. We searched the Pubmed database on the relationship between ABO blood groups and gastric cancer risk for meta-analysis. In our case-control study, the risk of gastric cancer in blood group A was significantly higher than that in non-A groups (O, B and AB) (odd ratio, OR1.34; 95% confidential interval, CI 1.25-1.44). Compared with non-O groups (A, B and AB), individuals with blood group O demonstrated a reduced risk of gastric cancer (OR = 0.80; 95% CI 0.72-0.88). The proportion of H. pylori infection in blood group A individuals was significantly higher than that in non-A blood groups (OR = 1.42; 95% CI 1.05-1.93). We further combined our data with the published data of others, and crossreferenced the risk of gastric cancer with the blood type, finding consistent evidence that gastric cancer risk in the blood A group was higher than that in the non-A groups (OR = 1.11; 95% CI 1.07-1.15), and that blood type O individuals were consistently shown gastric cancer risk reduction (OR = 0.91; 95% CI 0.89-0.94). Our study concluded that there was a slightly increased risk of gastric cancer in blood group A individuals, and people with blood type A are more prone to be infected by H. pylori than other ABO blood type individuals, whereas, a slightly decreased risk of gastric cancer was identified in blood type O individuals.

  8. A unified framework for group independent component analysis for multi-subject fMRI data.

    Science.gov (United States)

    Guo, Ying; Pagnoni, Giuseppe

    2008-09-01

    Independent component analysis (ICA) is becoming increasingly popular for analyzing functional magnetic resonance imaging (fMRI) data. While ICA has been successfully applied to single-subject analysis, the extension of ICA to group inferences is not straightforward and remains an active topic of research. Current group ICA models, such as the GIFT [Calhoun, V.D., Adali, T., Pearlson, G.D., Pekar, J.J., 2001. A method for making group inferences from functional MRI data using independent component analysis. Hum. Brain Mapp. 14, 140-151.] and tensor PICA [Beckmann, C.F., Smith, S.M., 2005. Tensorial extensions of independent component analysis for multisubject FMRI analysis. Neuroimage 25, 294-311.], make different assumptions about the underlying structure of the group spatio-temporal processes and are thus estimated using algorithms tailored for the assumed structure, potentially leading to diverging results. To our knowledge, there are currently no methods for assessing the validity of different model structures in real fMRI data and selecting the most appropriate one among various choices. In this paper, we propose a unified framework for estimating and comparing group ICA models with varying spatio-temporal structures. We consider a class of group ICA models that can accommodate different group structures and include existing models, such as the GIFT and tensor PICA, as special cases. We propose a maximum likelihood (ML) approach with a modified Expectation-Maximization (EM) algorithm for the estimation of the proposed class of models. Likelihood ratio tests (LRT) are presented to compare between different group ICA models. The LRT can be used to perform model comparison and selection, to assess the goodness-of-fit of a model in a particular data set, and to test group differences in the fMRI signal time courses between subject subgroups. Simulation studies are conducted to evaluate the performance of the proposed method under varying structures of group spatio

  9. Diversity of Xiphinema americanum-group Species and Hierarchical Cluster Analysis of Morphometrics.

    Science.gov (United States)

    Lamberti, F; Ciancio, A

    1993-09-01

    Of the 39 species composing the Xiphinema americanum group, 14 were described originally from North America and two others have been reported from this region. Many species are very similar morphologically and can be distinguished only by a difficult comparison of various combinations of some morphometric characters. Study of morphometrics of 49 populations, including the type populations of the 39 species attributed to this group, by principal component analysis and hierarchical cluster analysis placed the populations into five subgroups, proposed here as the X. brevicolle subgroup (seven species), the X. americanum subgroup (17 species), the X. taylori subgroup (two species), the X. pachtaicum subgroup (eight species), and the X. lambertii subgroup (five species).

  10. NASA ExoPAG Study Analysis Group 11: Preparing for the WFIRST Microlensing Survey

    CERN Document Server

    Yee, Jennifer C; Barry, Richard K; Bennett, David; Bryden, Geoff; Chung, Sun-Ju; Gaudi, B Scott; Gehrels, Neil; Gould, Andrew; Penny, Matthew T; Rattenbury, Nicholas; Ryu, Yoon-Hyun; Skowron, Jan; Street, Rachel; Sumi, Takahiro

    2014-01-01

    NASA's proposed WFIRST-AFTA mission will discover thousands of exoplanets with separations from the habitable zone out to unbound planets, using the technique of gravitational microlensing. The Study Analysis Group 11 of the NASA Exoplanet Program Analysis Group was convened to explore scientific programs that can be undertaken now, and in the years leading up to WFIRST's launch, in order to maximize the mission's scientific return and to reduce technical and scientific risk. This report presents those findings, which include suggested precursor Hubble Space Telescope observations, a ground-based, NIR microlensing survey, and other programs to develop and deepen community scientific expertise prior to the mission.

  11. FRAME MULTIRESOLUTION ANALYSIS AND INFINITE TREES IN BANACH SPACES ON LOCALLY COMPACT ABELIAN GROUPS

    Institute of Scientific and Technical Information of China (English)

    S. S. Panday

    2004-01-01

    We extend the concept of frame multiresolution analysis to a locally compact abelian group and use it to define certain weighted Banach spaces and the spaces of their antifunctionals. We define analysis and synthesis operators on these spaces and establish the continuity of their composition. Also, we prove a general result to characterize infinite trees in the above Banach spaces of antifunctionals. This paper paves the way for the study of corresponding problems associated with some other types of Banach spaces on locally compact abelian groups including modulation spaces.

  12. The multilevel analysis of surface acting and mental health: A moderation of positive group affective tone

    Science.gov (United States)

    Lee, Meng-Shiu; Huang, Jui-Chan; Wu, Tzu-Jung

    2017-06-01

    The purpose of this study is to investigate the relationship among surface acting, mental health, and positive group affective tone. According to the prior theory, this study attempts to establish a comprehensive research framework among these variables, and furthermore tests the moderating effect of positive group affective tone. Data were collected from 435 employees in 52 service industrial companies by questionnaire, and this study conducted multilevel analysis. The results showed that surface acting will negatively affect the mental health. In addition, the positive group affective tone have significant moderating effect on the relationship among surface acting and mental health. Finally, this study discusses managerial implications and highlights future research suggestions.

  13. Estimation and Uncertainty Analysis of Flammability Properties of Chemicals using Group-Contribution Property Models

    DEFF Research Database (Denmark)

    Frutiger, Jerome; Abildskov, Jens; Sin, Gürkan

    or time constraints, property prediction models like group contribution (GC) models can estimate flammability data. The estimation needs to be accurate, reliable and as less time consuming as possible. However, GC property prediction methods frequently lack rigorous uncertainty analysis. Hence......, there is no information about the reliability of the data. Furthermore, the global optimality of the GC parameters estimation is often not ensured. In this research project flammability-related property data, like LFL and UFL, are estimated using the Marrero and Gani group contribution method (MG method). In addition...... the group contribution in three levels: The contributions from a specific functional group (1st order parameters), from polyfunctional (2nd order parameters) as well as from structural groups (3rd order parameters). The latter two classes of GC factors provide additional structural information beside...

  14. Analysis of individual versus group behavior of zebrafish: a model using pH sublethal effects.

    Science.gov (United States)

    Magalhães, Danielly de Paiva; Buss, Daniel Forsin; da Cunha, Rodolfo Armando; Linde-Arias, Ana Rosa; Baptista, Darcilio Fernandes

    2012-06-01

    An image analysis biomonitoring system was used to evaluate sublethal effects of pH on the mean swimming velocity of zebrafish. Responses to stress were tested comparing individual and group responses. Group analysis indicated no effect for all acid pH and for pH 9.0-9.5. Individual analysis indicated behavioral differences for most acid pH and higher than 9.5. Sensitivity to sublethal pH was best assessed when using individual analysis. Zebrafish decreased hyperactivity and increased hypoactivity with more acid or alkaline pH. Individual approach allowed to determine hyperactivity or hypoactivity and the species' thresholds of exposure, which is critical for the management of impairments.

  15. An Integrated Approach with Group Decision-Making for Strategy Selection in SWOT Analysis

    Directory of Open Access Journals (Sweden)

    İhsan Yüksel

    2012-11-01

    Full Text Available The main aim of this study was to improve the analytical dimension of SWOT (strengths, weaknesses, opportunities and threats analysis with group decision-making, which underlines the analysis of internal and external environments that in turn, will improve the definition of corporate strategy within the strategic planning process. The main issue of the study was how to select the most appropriate strategy by taking into consideration different effects of each factor of SWOT analysis on strategy selection. The proposed model addresses strengths and opportunities as benefits and weaknesses and threats as costs. The model was solved with analytic network process (ANP and fuzzy technique for order performance by similarity to ideal solution (TOPSIS technique with group decision-making. The integrated ANP and Fuzzy TOPSIS model proposed at the end of the present study has been shown to be applicable to SWOT analysis and strategy selection.

  16. Validation of a blood group genotyping method based on high-resolution melting curve analysis.

    Science.gov (United States)

    Gong, Tianxiang; Hong, Ying; Wang, Naihong; Fu, Xuemei; Zhou, Changhua

    2014-01-01

    The detection of polymorphism is the basis of blood group genotyping and phenotype prediction. Genotyping may be useful to determine blood groups when serologic results are unclear. The development and application of different methods for blood group genotyping may be needed as a substitute for blood group typing. The purpose of this study is to establish an approach for blood group genotyping based on a melting curve analysis of real-time polymerase chain reaction (PCR). Using DNA extracted from whole blood, we developed and validated a DNA typing method for detecting DO*01/DO*02, DO*01/DI*02, LU*01/LU*02, and GYPB*03/GYBP*04 alleles using a melting curve analysis. All assays were confirmed with a commercial reagent containing sequence-specific primers (PCR-SSP), and a cohort of the samples was confirmed with sequencing. Results for all blood groups were within the range of specificity and assay variability. Genotypes of 300 blood donors were fully consistent with PCR-SSP data. The obtained genotype distribution is in complete concordance with existing data for the Chinese population. There are several advantages for this approach of blood group genotyping: lower contamination rates with PCR products in this laboratory, ease of performance, automation potential, and rapid cycling time.

  17. Quantifying TiO2 Abundance of Lunar Soils:Partial Least Squares and Stepwise Multiple Regression Analysis for Determining Causal Effect

    Institute of Scientific and Technical Information of China (English)

    Lin Li

    2011-01-01

    Partial least squares (PLS) regression was applied to the Lunar Soil Characterization Consortium (LSCC) dataset for spectral estimation of TiO2.The LSCC dataset was split into a number of subsets including the low-Ti,high-Ti,total mare soils,total highland,Apollo 16,and Apollo 14 soils to investigete the effects of interfering minerals and nonlinearity on the PLS performance.The PLS weight loading vectors were analyzed through stepwise multiple regression analysis (SMRA) to identify mineral species driving and interfering the PLS performance.PLS exhibits high performance for estimating TiO2 for the LSCC low-Ti and high-Ti mare samples and both groups analyzed together.The results suggest that while the dominant TiO2-bearing minerals are few,additional PLS factors are required to compensate the effects on the important PLS factors of minerals that are not highly corrected to TiO2,to accommodate nonlinear relationships between reflectance and TiO2,and to correct inconsistent mineral-TiO2 correlations between the high-Ti and iow-Ti mare samples.Analysis of the LSCC highland soil samples indicates that the Apollo 16 soils are responsible for the large errors of TiO2 estimates when the soils are modeled with other subgroups.For the LSCC Apollo 16 samples,the dominant spectral effects of plagioclase over other dark minerals are primarily responsible for large errors of estimated TiO2.For the Apollo 14 soils,more accurate estimation for TiO2 is attributed to the positive correlation between a major TiO2-bearing component and TiO2,explaining why the Apollo 14 soils follow the regression trend when analyzed with other soils groups.

  18. Abundance, Excess, Waste

    Directory of Open Access Journals (Sweden)

    Rox De Luca

    2016-02-01

    Her recent work focuses on the concepts of abundance, excess and waste. These concerns translate directly into vibrant and colourful garlands that she constructs from discarded plastics collected on Bondi Beach where she lives. The process of collecting is fastidious, as is the process of sorting and grading the plastics by colour and size. This initial gathering and sorting process is followed by threading the components onto strings of wire. When completed, these assemblages stand in stark contrast to the ease of disposability associated with the materials that arrive on the shoreline as evidence of our collective human neglect and destruction of the environment around us. The contrast is heightened by the fact that the constructed garlands embody the paradoxical beauty of our plastic waste byproducts, while also evoking the ways by which those byproducts similarly accumulate in randomly assorted patterns across the oceans and beaches of the planet.

  19. Creating a group profile through error analysis in advanced L2 translation training

    OpenAIRE

    HEANEY, Dermot

    2011-01-01

    Error analysis and product assessment are increasingly viewed as reductive procedures in translation pedagogy. In the current paper, a case is made for ‘rehabilitating’ error analysis, especially in advanced L2 translation teaching. Attention is drawn to its usefulness in creating a group profile for L2 translation trainees, particularly as regards the scope it offers for showing how aspects of linguistic transfer frequently considered marginal, when taken individually, are, on...

  20. SPECIES RICHNESS AND INDICES OF ABUNDANCE OF MEDIUM-SIZED MAMMALS IN ANDEAN FOREST AND REFORESTATIONS WITH ANDEAN ALDER: A PRELIMINARY ANALYSIS

    Directory of Open Access Journals (Sweden)

    SÁNCHEZ FRANCISCO

    2008-07-01

    Full Text Available We studied the species richness and two indices of abundance of medium-sizedmammals in areas with Andean forest and Andean alder (Alnus acuminatareforestations in a reserve at the Central Andes of Colombia. Since reforested areashave a less complex habitat structure and lower plant diversity than native forests, wepredicted that they have lower richness of mammals than areas with Andean forest.We obtained the indices of abundance from direct contacts in transects and from theuse of track stations. Our results suggest that, indeed, areas with Andean forest hada higher richness of mammals than reforestations, but this pattern may be modifiedby anthropogenic factors. We found no differences between the indices of abundanceof the squirrel, Sciurus granatensis, in the two forest types. In contrast, the coatiswere recorded more frequently in the reforestations than in areas with Andean forestat the reserve.

  1. 中等贫金属星的元素丰度分析%Abundance Analysis in the Mildly Metal-poor Stars

    Institute of Scientific and Technical Information of China (English)

    邱红梅; 赵刚; 新宇; 李宗伟

    2000-01-01

    We present here some observed data on 11 mildly metal-poor stars with -1.3 [Fe/H] -0.6. The model parameters and the abundances of 14 elements are determined. We also discuss the relation between the abundance ratio and the metallicity. The elements (Mg, Si, Ca, Ti) are overabundant relative to Fe with a varying scatter at each given metallicity. Most of the iron-peak elements (V, Cr, Ni, Cu) are also overabundant relative to Fe by amounts that are independent of [Fe/H], while [Mn/Fe] increases with increasing metallicity. [Na/Al] is overabundant in the sample with [Fe/H]>-1.1 and definitely overdeficient in the sample with [Fe/H]-1.1的样本星中表现超丰,在[Fe/H]<-1.1的样本中却明显过贫.

  2. 75 FR 34530 - Analysis by the President's Working Group on Financial Markets on the Long-Term Availability and...

    Science.gov (United States)

    2010-06-17

    ... Analysis by the President's Working Group on Financial Markets on the Long-Term Availability and... President's Working Group on Financial Markets to perform an analysis and report to Congress regarding the... Working Group on Financial Markets is to conduct its analysis in consultation with the...

  3. Surface abundances of ON stars

    CERN Document Server

    Martins, F; Palacios, A; Howarth, I; Georgy, C; Walborn, N R; Bouret, J -C; Barba, R

    2015-01-01

    Massive stars burn hydrogen through the CNO cycle during most of their evolution. When mixing is efficient, or when mass transfer in binary systems happens, chemically processed material is observed at the surface of O and B stars. ON stars show stronger lines of nitrogen than morphologically normal counterparts. Whether this corresponds to the presence of material processed through the CNO cycle or not is not known. Our goal is to answer this question. We perform a spectroscopic analysis of a sample of ON stars with atmosphere models. We determine the fundamental parameters as well as the He, C, N, and O surface abundances. We also measure the projected rotational velocities. We compare the properties of the ON stars to those of normal O stars. We show that ON stars are usually helium-rich. Their CNO surface abundances are fully consistent with predictions of nucleosynthesis. ON stars are more chemically evolved and rotate - on average - faster than normal O stars. Evolutionary models including rotation cann...

  4. A cladistic analysis of Aristotle's animal groups in the Historia animalium.

    Science.gov (United States)

    von Lieven, Alexander Fürst; Humar, Marcel

    2008-01-01

    The Historia animalium (HA) of Aristotle contains an extraordinarily rich compilation of descriptions of animal anatomy, development, and behaviour. It is believed that Aristotle's aim in HA was to describe the correlations of characters rather than to classify or define animal groups. In order to assess if Aristotle, while organising his character correlations, referred to a pre-existing classification that underlies the descriptions in HA, we carried out a cladistic analysis according to the following procedure: by disentangeling 147 species and 40 higher taxa-designations from 157 predicates in the texts, we transcribed Aristotle's descriptions on anatomy and development of animals in books I-V of HA into a character matrix for a cladistic analysis. By analysing the distribution of characters as described in his books, we obtained a non-phylogenetic dendrogram displaying 58 monophyletic groups, 29 of which have equivalents among Aristotle's group designations. Eleven Aristotelian groupings turned out to be non-monophyletic, and six of them are inconsistent with the monophyletic groups. Twelve of 29 taxa without equivalents in Aristotle's works have equivalents in modern classifications. With this analysis we demonstate there exists a fairly consistent underlying classification in the zoological works of Aristotle. The peculiarities of Aristotle's character basis are discussed and the dendrogram is compared with a current phylogenetic tree.

  5. Continuous versus group sequential analysis for post-market drug and vaccine safety surveillance.

    Science.gov (United States)

    Silva, I R; Kulldorff, M

    2015-09-01

    The use of sequential statistical analysis for post-market drug safety surveillance is quickly emerging. Both continuous and group sequential analysis have been used, but consensus is lacking as to when to use which approach. We compare the statistical performance of continuous and group sequential analysis in terms of type I error probability; statistical power; expected time to signal when the null hypothesis is rejected; and the sample size required to end surveillance without rejecting the null. We present a mathematical proposition to show that for any group sequential design there always exists a continuous sequential design that is uniformly better. As a consequence, it is shown that more frequent testing is always better. Additionally, for a Poisson based probability model and a flat rejection boundary in terms of the log likelihood ratio, we compare the performance of various continuous and group sequential designs. Using exact calculations, we found that, for the parameter settings used, there is always a continuous design with shorter expected time to signal than the best group design. The two key conclusions from this article are (i) that any post-market safety surveillance system should attempt to obtain data as frequently as possible, and (ii) that sequential testing should always be performed when new data arrives without deliberately waiting for additional data. © 2015, The International Biometric Society.

  6. Local sphere-based co-registration for SAM group analysis in subjects without individual MRI.

    Science.gov (United States)

    Steinstraeter, O; Teismann, Inga K; Wollbrink, A; Suntrup, S; Stoeckigt, K; Dziewas, R; Pantev, C

    2009-03-01

    Synthetic aperture magnetometry (SAM) is a powerful MEG source localization method to analyze evoked as well as induced brain activity. To gain structural information of the underlying sources, especially in group studies, individual magnetic resonance images (MRI) are required for co-registration. During the last few years, the relevance of MEG measurements on understanding the pathophysiology of different diseases has noticeable increased. Unfortunately, especially in patients and small children, structural MRI scans cannot always be performed. Therefore, we developed a new method for group analysis of SAM results without requiring structural MRI data that derives its geometrical information from the individual volume conductor model constructed for the SAM analysis. The normalization procedure is fast, easy to implement and integrates seamlessly into an existing landmark based MEG-MRI co-registration procedure. This new method was evaluated on different simulated points as well as on a pneumatic index finger stimulation paradigm analyzed with SAM. Compared with an established MRI-based normalization procedure (SPM2) the new method shows only minor errors in single subject results as well as in group analysis. The mean difference between the two methods was about 4 mm for the simulated as well as for finger stimulation data. The variation between individual subjects was generally higher than the error induced by the missing MRIs. The method presented here is therefore sufficient for most MEG group studies. It allows accomplishing MEG studies with subject groups where MRI measurements cannot be performed.

  7. EEGIFT: Group Independent Component Analysis for Event-Related EEG Data

    Directory of Open Access Journals (Sweden)

    Tom Eichele

    2011-01-01

    Full Text Available Independent component analysis (ICA is a powerful method for source separation and has been used for decomposition of EEG, MRI, and concurrent EEG-fMRI data. ICA is not naturally suited to draw group inferences since it is a non-trivial problem to identify and order components across individuals. One solution to this problem is to create aggregate data containing observations from all subjects, estimate a single set of components and then back-reconstruct this in the individual data. Here, we describe such a group-level temporal ICA model for event related EEG. When used for EEG time series analysis, the accuracy of component detection and back-reconstruction with a group model is dependent on the degree of intra- and interindividual time and phase-locking of event related EEG processes. We illustrate this dependency in a group analysis of hybrid data consisting of three simulated event-related sources with varying degrees of latency jitter and variable topographies. Reconstruction accuracy was tested for temporal jitter 1, 2 and 3 times the FWHM of the sources for a number of algorithms. The results indicate that group ICA is adequate for decomposition of single trials with physiological jitter, and reconstructs event related sources with high accuracy.

  8. Therapist's Directive and Nondirective Behavior: Analysis of Their Effects in a Parent Training Group

    Science.gov (United States)

    Silveira, Fabiane Ferraz; Bolsoni-Silva, Alessandra Turini; Meyer, Sonia Beatriz

    2010-01-01

    The study described the interaction between therapist and clients in a group intervention with two mothers and a grandmother. Five out of thirteen taped sessions were designated for analysis. Main results: a) therapist's categories that stood out: approval, recommendation, interpretation, information and information request; b) clients' categories…

  9. Hamiltonian analysis of the BFCG theory for a generic Lie 2-group

    CERN Document Server

    Mikovic, Aleksandar; Vojinovic, Marko

    2016-01-01

    We perform a complete Hamiltonian analysis of the BFCG action for a general Lie 2-group by using the Dirac procedure. We show that the resulting dynamical constraints eliminate all local degrees of freedom which implies that the BFCG theory is a topological field theory.

  10. Boundary Layer Equations and Lie Group Analysis of a Sisko Fluid

    Directory of Open Access Journals (Sweden)

    Gözde Sarı

    2012-01-01

    Full Text Available Boundary layer equations are derived for the Sisko fluid. Using Lie group theory, a symmetry analysis of the equations is performed. A partial differential system is transferred to an ordinary differential system via symmetries. Resulting equations are numerically solved. Effects of non-Newtonian parameters on the solutions are discussed.

  11. A collaborative study of the EDNAP group regarding Y-chromosome binary polymorphism analysis

    DEFF Research Database (Denmark)

    Brion, María; Dupuy, Berit M; Heinrich, Marielle

    2005-01-01

    A collaborative study was carried out by the European DNA Profiling Group (EDNAP) in order to evaluate the performance of Y-chromosome binary polymorphism analysis in different European laboratories. Four blood samples were sent to the laboratories, to be analysed for 11 Y-chromosome single nucle...

  12. Gender Issues on the Information Highway: An Analysis of Communication Styles in Electronic Discussion Groups.

    Science.gov (United States)

    Rossetti, Paolo

    A study investigated gender differences in language use in electronic mail discussion groups. A review of research on discourse analysis identifies areas in which gender differences are found in interpersonal interaction and language use in general, and how these reflect differences in socialization. Research on electronic discussion groups…

  13. Application of AHP-Ansoff Matrix Analysis in Business Diversification: The case of Evergrande Group

    Directory of Open Access Journals (Sweden)

    Yin Nan

    2016-01-01

    Full Text Available A new method of enterprise strategic research, the AHP—Ansoff Matrix analysis method, is put forward in this paper for the first time and applied in the enterprise practices. By using this research method, the development strategy of enterprise diversification is analyzed scientifically and reasonably with Evergrande group as the example. And finally, main procedures of the method are summarized.

  14. Non-parametric group-level statistics for source-resolved ERP analysis.

    Science.gov (United States)

    Lee, Clement; Miyakoshi, Makoto; Delorme, Arnaud; Cauwenberghs, Gert; Makeig, Scott

    2015-01-01

    We have developed a new statistical framework for group-level event-related potential (ERP) analysis in EEGLAB. The framework calculates the variance of scalp channel signals accounted for by the activity of homogeneous clusters of sources found by independent component analysis (ICA). When ICA data decomposition is performed on each subject's data separately, functionally equivalent ICs can be grouped into EEGLAB clusters. Here, we report a new addition (statPvaf) to the EEGLAB plug-in std_envtopo to enable inferential statistics on main effects and interactions in event related potentials (ERPs) of independent component (IC) processes at the group level. We demonstrate the use of the updated plug-in on simulated and actual EEG data.

  15. The analysis of a personality profile of selected groups of nurses.

    Science.gov (United States)

    Herman, Joanna; Rotter, Iwona; Kemicer-Chmielewska, Ewa; Karakiewicz, Beata; Laszczyńska, Maria

    2013-01-01

    The analysis of a personality profile of selected groups of Polish nurses. 72 nurses working in internal diseases departments and departments of surgery in Szczecin were investigated. To examine the personality profiles a diagnostic survey was used. It was based on an authorised Polish elaboration of Cattell's 16 Personality Factors Test. To examine their personality profile an authorised Polish elaboration of a diagnostic survey based on a standardized elaboration of personality profiles by Raymond B. Cattell was used. The analysis of the results indicated no significant differences between groups. The average sten scores from each of 16 examined factors were within the established limits. The personality profiles of the examined groups of nurses indicated a greater probability of the appearance of desirable features among the investigated people working in medical professions and demanding team cooperation, as well as relationship-building skills. Nurses, regardless of workplace, had personality traits indicating the need for education and improving occupational qualifications.

  16. Dynamical analysis of strong-lensing galaxy groups at intermediate redshift

    CERN Document Server

    Muñoz, R P; Verdugo, T; Garrido, F; Limousin, M; Padilla, N; Foëx, G; Cabanac, R; Gavazzi, R; Barrientos, L F; Richard, J

    2012-01-01

    We present VLT spectroscopic observations of 7 discovered galaxy groups between 0.3groups were selected from the Strong Lensing Legacy Survey (SL2S), a survey that consists in a systematic search for strong lensing systems in the Canada-France-Hawaii Telescope Legacy Survey (CFHTLS). We give details about the target selection, spectroscopic observations and data reduction for the first release of confirmed SL2S groups. The dynamical analysis of the systems reveals that they are gravitationally bound structures, with at least 4 confirmed members and velocity dispersions between 300 and 800 km/s. Their virial masses are between 10^13 and 10^14 M_sun, and so can be classified as groups or low mass clusters. Most of the systems are isolated groups, except two of them that show evidence of an ongoing merger of two sub-structures. We find a good agreement between the velocity dispersions estimated from the analysis of the kinematics of group galaxies and the weak lensing measurements, and conclude...

  17. Mathematical Model and Analysis of Negative Skin Friction of Pile Group in Consolidating Soil

    Directory of Open Access Journals (Sweden)

    Gangqiang Kong

    2013-01-01

    Full Text Available In order to calculate negative skin friction (NSF of pile group embedded in a consolidating soil, the dragload calculating formulas of single pile were established by considering Davis one-dimensional nonlinear consolidation soils settlement and hyperbolic load-transfer of pile-soil interface. Based on effective influence area theory, a simple semiempirical mathematical model of analysis for predicting the group effect of pile group under dragload was described. The accuracy and reliability of mathematical models built in this paper were verified by practical engineering comparative analysis. Case studies were studied, and the prediction values were found to be in good agreement with those of measured values. Then, the influences factors, such as, soil consolidation degree, the initial volume compressibility coefficient, and the stiffness of bearing soil, were analyzed and discussed. The results show that the mathematical models considering nonlinear soil consolidation and group effect can reflect the practical NSF of pile group effectively and accurately. The results of this paper can provide reference for practical pile group embedded in consolidating soil under NSF design and calculation.

  18. Multiple Group Testing Procedures for Analysis of High-Dimensional Genomic Data

    Science.gov (United States)

    Ko, Hyoseok; Kim, Kipoong

    2016-01-01

    In genetic association studies with high-dimensional genomic data, multiple group testing procedures are often required in order to identify disease/trait-related genes or genetic regions, where multiple genetic sites or variants are located within the same gene or genetic region. However, statistical testing procedures based on an individual test suffer from multiple testing issues such as the control of family-wise error rate and dependent tests. Moreover, detecting only a few of genes associated with a phenotype outcome among tens of thousands of genes is of main interest in genetic association studies. In this reason regularization procedures, where a phenotype outcome regresses on all genomic markers and then regression coefficients are estimated based on a penalized likelihood, have been considered as a good alternative approach to analysis of high-dimensional genomic data. But, selection performance of regularization procedures has been rarely compared with that of statistical group testing procedures. In this article, we performed extensive simulation studies where commonly used group testing procedures such as principal component analysis, Hotelling's T2 test, and permutation test are compared with group lasso (least absolute selection and shrinkage operator) in terms of true positive selection. Also, we applied all methods considered in simulation studies to identify genes associated with ovarian cancer from over 20,000 genetic sites generated from Illumina Infinium HumanMethylation27K Beadchip. We found a big discrepancy of selected genes between multiple group testing procedures and group lasso.

  19. The platinum group elements and gold: analysis by radiochemical and instrumental neutron activation analysis and relevance to geological exploration and related problems

    Energy Technology Data Exchange (ETDEWEB)

    Reeves, S.; Plimer, I. R. [Melbourne Univ., Parkville, VIC (Australia). School of Physics

    1996-12-31

    This paper presents an overview of research conducted with the support of the Australian Institute of Nuclear Science and Engineering, at the University of Melbourne, School of Earth Sciences, Radiochemical Neutron Activation Laboratory. The primary objective of this research is to realize the high potential of the platinum group elements (PGE) and gold to the solution of petrogenetic problems, the study of magma generation and magmatic processes in mafic/ultramafic rock suites, as tracers in hydrothermal ore formation. The PGEs (Os, Ru, Ir, Pt, Pd and Rh) are among the least abundant of all elements on earth with unique properties such as high melting points, high electrical and thermal conductivity, high density, strength and toughness as alloys. They exhibit both siderophile and chalcophile characteristics and are valuable tools in providing information about magmatic processes, in particular S-saturation, as well as crystal fractionation trends. Two distinct groups of PGEs are discerned; the IPGEs (Ru, Os, Ir) and the PPGEs (Pt, Pd, Rh, Au) on the basis of their behaviour during fractionation processes. Using chondrite normalized PGE patterns it is possible to distinguish between sulphides that segregated from primitive magmas, such as komatiites, and sulphides which segregated from more fractionated magmas, such as tholeiites. It is critical to the understanding of these processes to be able to analyse key elements, such as the PGE and gold, in the parts per billion to parts per trillion range. Platinum group elements and Au were determined by radiochemical neutron activation analysis using a modified NiS fire-assay preconcentration technique, adapted from procedures first used by Robert, R.V. D. and van Wyk, E. (1975) . Detection limits are generally 0.005-0.01 ppb (Au and Ir), 0.1-0.2 ppb (Pd and Pt), and 0.1-0.5 ppb for Ru. 9 refs.

  20. Zooplankton abundance of the Andaman sea

    Digital Repository Service at National Institute of Oceanography (India)

    Madhupratap, M.; Achuthankutty, C.T.; Nair, S.R.S.; Nair, V.R.

    Zooplankton biomass and abundance of major groups from the Andaman Sea in February 1979 are presented. Average zooplankton biomass is 5.6 ml/100 m3 and is generally poor compared to reported values from east and west coasts of India. Copepoda forms...

  1. Group analysis of evolutionary integro-differential equations describing nonlinear waves: the general model

    Energy Technology Data Exchange (ETDEWEB)

    Ibragimov, Nail H [Department of Mathematics and Science, Blekinge Institute of Technology, SE-371 79 Karlskrona (Sweden); Meleshko, Sergey V [School of Mathematics, Institute of Science, Suranaree University of Technology, Nakhon Ratchasima 30000 (Thailand); Rudenko, Oleg V, E-mail: nib@bth.se, E-mail: sergey@math.sut.ac.th, E-mail: rudenko@acs366.phys.msu.ru [Department of Physics, Moscow State University, 119991 Moscow (Russian Federation)

    2011-08-05

    The paper deals with an evolutionary integro-differential equation describing nonlinear waves. A particular choice of the kernel in the integral leads to well-known equations such as the Khokhlov-Zabolotskaya equation, the Kadomtsev-Petviashvili equation and others. Since the solutions of these equations describe many physical phenomena, the analysis of the general model studied in this paper is important. One of the methods for obtaining solutions of differential equations is provided by the Lie group analysis. However, this method is not applicable to integro-differential equations. Therefore, we discuss new approaches developed in modern group analysis and apply them to the general model considered in this paper. Reduced equations and exact solutions are also presented.

  2. Hydrocarbon group type analysis of petroleum heavy fractions using the TLC-FID technique

    Energy Technology Data Exchange (ETDEWEB)

    Sharma, B.K.; Sarowha, S.L.S.; Bhagat, S.D. [Indian Institute of Petroleum, Dehradun (India); Tiwari, R.K.; Gupta, S.K.; Venkataramani, P.S. [Defence Materials and Stores, Research and Development, Establishment, Kanpur (India)

    1998-03-01

    Hydrocarbon group type analysis is important in all conversion processes and in preparation of feed for these conversion processes so as to learn the selectivity of the different type of catalysts for product yield and quality. The use of the Mark 5 Iatroscan detector and the method reported here allowed for a rapid and quantitative hydrocarbon group type analysis of petroleum residues without prior separation of asphaltenes. SARA type analyses of petroleum residues have been performed by a three stage development using n-hexane, toluene and DCM (95%):MeOH (5%). The standard deviation and coefficient of variation in repeated measurements by this method were as low as 0.65 wt% or less and 3.5 wt% or less, respectively. The time required for analysis of 10 samples could be as short as 90 min. (orig.) With 2 figs., 6 tabs., 21 refs.

  3. The Penn State - Toruń Centre for Astronomy Planet Search stars. II. Lithium abundance analysis of the red giant clump sample

    Science.gov (United States)

    Adamów, M.; Niedzielski, A.; Villaver, E.; Wolszczan, A.; Nowak, G.

    2014-09-01

    Context. Standard stellar evolution theory does not predict existence of Li-rich giant stars. Several mechanisms for Li-enrichment have been proposed to operate at certain locations inside some stars. The actual mechanism operating in real stars is still unknown. Aims: Using the sample of 348 stars from the Penn State - Toruń Centre for Astronomy Planet Search, for which uniformly determined atmospheric parameters are available, with chemical abundances and rotational velocities presented here, we investigate various channels of Li enrichment in giants. We also study Li-overabundant giants in more detail in search for origin of their peculiarities. Methods: Our work is based on the Hobby-Eberly Telescope spectra obtained with the High Resolution Spectrograph, which we use for determination of abundances and rotational velocities. The Li abundance was determined from the 7Li λ670.8 nm line, while we use a more extended set of lines for α-elements abundances. In a series of Kolmogorov-Smirnov tests, we compare Li-overabundant giants with other stars in the sample. We also use available IR photometric and kinematical data in search for evidence of mass-loss. We investigate properties of the most Li-abundant giants in more detail by using multi-epoch precise radial velocities. Results: We present Li and α-elements abundances, as well as rotational velocities for 348 stars. We detected Li in 92 stars, of which 82 are giants. Eleven of them show significant Li abundance A(Li)NLTE> 1.4 and seven of them are Li-overabundant objects, according to common criterion of A(Li) > 1.5 and their location on HR diagram, including TYC 0684-00553-1 and TYC 3105-00152-1, which are two giants with Li abundances close to meteoritic level. For another 271 stars, upper limits of Li abundance are presented. We confirmed three objects with increased stellar rotation. We show that Li-overabundant giants are among the most massive stars from our sample and show larger than average

  4. GALA: group analysis leads to accuracy, a novel approach for solving the inverse problem in exploratory analysis of group MEG recordings.

    Science.gov (United States)

    Kozunov, Vladimir V; Ossadtchi, Alexei

    2015-01-01

    Although MEG/EEG signals are highly variable between subjects, they allow characterizing systematic changes of cortical activity in both space and time. Traditionally a two-step procedure is used. The first step is a transition from sensor to source space by the means of solving an ill-posed inverse problem for each subject individually. The second is mapping of cortical regions consistently active across subjects. In practice the first step often leads to a set of active cortical regions whose location and timecourses display a great amount of interindividual variability hindering the subsequent group analysis. We propose Group Analysis Leads to Accuracy (GALA)-a solution that combines the two steps into one. GALA takes advantage of individual variations of cortical geometry and sensor locations. It exploits the ensuing variability in electromagnetic forward model as a source of additional information. We assume that for different subjects functionally identical cortical regions are located in close proximity and partially overlap and their timecourses are correlated. This relaxed similarity constraint on the inverse solution can be expressed within a probabilistic framework, allowing for an iterative algorithm solving the inverse problem jointly for all subjects. A systematic simulation study showed that GALA, as compared with the standard min-norm approach, improves accuracy of true activity recovery, when accuracy is assessed both in terms of spatial proximity of the estimated and true activations and correct specification of spatial extent of the activated regions. This improvement obtained without using any noise normalization techniques for both solutions, preserved for a wide range of between-subject variations in both spatial and temporal features of regional activation. The corresponding activation timecourses exhibit significantly higher similarity across subjects. Similar results were obtained for a real MEG dataset of face-specific evoked responses.

  5. GALA: Group Analysis Leads to Accuracy, a novel approach for solving the inverse problem in exploratory analysis of group MEG recordings

    Directory of Open Access Journals (Sweden)

    Vladimir eKozunov

    2015-04-01

    Full Text Available Although MEG/EEG signals are highly variable between subjects, they allow characterizing systematic changes of cortical activity in both space and time. Traditionally a two-step procedure is used. The first step is a transition from sensor to source space by the means of solving an ill-posed inverse problem for each subject individually. The second is mapping of cortical regions consistently active across subjects. In practice the first step often leads to a set of active cortical regions whose location and timecourses display a great amount of interindividual variability hindering the subsequent group analysis.We propose Group Analysis Leads to Accuracy (GALA - a solution that combines the two steps into one. GALA takes advantage of individual variations of cortical geometry and sensor locations. It exploits the ensuing variability in electromagnetic forward model as a source of additional information. We assume that for different subjects functionally identical cortical regions are located in close proximity and partially overlap and their timecourses are correlated. This relaxed similarity constraint on the inverse solution can be expressed within a probabilistic framework, allowing for an iterative algorithm solving the inverse problem jointly for all subjects.A systematic simulation study showed that GALA, as compared with the standard min-norm approach, improves accuracy of true activity recovery, when accuracy is assessed both in terms of spatial proximity of the estimated and true activations and correct specification of spatial extent of the activated regions. This improvement obtained without using any noise normalization techniques for both solutions, preserved for a wide range of between-subject variations in both spatial and temporal features of regional activation. The corresponding activation timecourses exhibit significantly higher similarity across subjects. Similar results were obtained for a real MEG dataset of face

  6. Integrative analysis of multiple diverse omics datasets by sparse group multitask regression

    Directory of Open Access Journals (Sweden)

    Dongdong eLin

    2014-10-01

    Full Text Available A variety of high throughput genome-wide assays enable the exploration of genetic risk factors underlying complex traits. Although these studies have remarkable impact on identifying susceptible biomarkers, they suffer from issues such as limited sample size and low reproducibility. Combining individual studies of different genetic levels/platforms has the promise to improve the power and consistency of biomarker identification. In this paper, we propose a novel integrative method, namely sparse group multitask regression, for integrating diverse omics datasets, platforms and populations to identify risk genes/factors of complex diseases. This method combines multitask learning with sparse group regularization, which will: 1 treat the biomarker identification in each single study as a task and then combine them by multitask learning; 2 group variables from all studies for identifying significant genes; 3 enforce sparse constraint on groups of variables to overcome the ‘small sample, but large variables’ problem. We introduce two sparse group penalties: sparse group lasso and sparse group ridge in our multitask model, and provide an effective algorithm for each model. In addition, we propose a significance test for the identification of potential risk genes. Two simulation studies are performed to evaluate the performance of our integrative method by comparing it with conventional meta-analysis method. The results show that our sparse group multitask method outperforms meta-analysis method significantly. In an application to our osteoporosis studies, 7 genes are identified as significant genes by our method and are found to have significant effects in other three independent studies for validation. The most significant gene SOD2 has been identified in our previous osteoporosis study involving the same expression dataset. Several other genes such as TREML2, HTR1E and GLO1 are shown to be novel susceptible genes for osteoporosis, as confirmed

  7. Enhancing medical students' reflectivity in mentoring groups for professional development - a qualitative analysis.

    Science.gov (United States)

    Lutz, Gabriele; Pankoke, Nina; Goldblatt, Hadass; Hofmann, Marzellus; Zupanic, Michaela

    2017-07-14

    Professional competence is important in delivering high quality patient care, and it can be enhanced by reflection and reflective discourse e.g. in mentoring groups. However, students are often reluctant though to engage in this discourse. A group mentoring program involving all preclinical students as well as faculty members and co-mentoring clinical students was initiated at Witten-Herdecke University. This study explores both the attitudes of those students towards such a program and factors that might hinder or enhance how students engage in reflective discourse. A qualitative design was applied using semi-structured focus group interviews with preclinical students and semi-structured individual interviews with mentors and co-mentors. The interview data were analyzed using thematic content analysis. Students' attitudes towards reflective discourse on professional challenges were diverse. Some students valued the new program and named positive outcomes regarding several features of professional development. Enriching experiences were described. Others expressed aversive attitudes. Three reasons for these were given: unclear goals and benefits, interpersonal problems within the groups hindering development and intrapersonal issues such as insecurity and traditional views of medical education. Participants mentioned several program setup factors that could enhance how students engage in such groups: explaining the program thoroughly, setting expectations and integrating the reflective discourse in a meaningful way into the curriculum, obliging participation without coercion, developing a sense of security, trust and interest in each other within the groups, randomizing group composition and facilitating group moderators as positive peer and faculty role models and as learning group members. A well-designed and empathetic setup of group mentoring programs can help raise openness towards engaging in meaningful reflective discourse. Reflection on and communication of

  8. Estimating the relative abundance of small mammals when there is no record of catching effort

    Directory of Open Access Journals (Sweden)

    Rui Cerqueira

    2015-08-01

    Full Text Available ABSTRACT Estimates of local population abundances, which require carefully designed sampling procedures, can provide valuable information on population size and density. Even though small mammals are one of the most widely studied vertebrate groups, many surveys have not recorded basic information to estimate local abundances, for instance catching effort. Here we suggest a simple comparative trapping frequency index that can be used as an alternative to the relative abundance index in data sets that only contain the number of species and individuals collected, thus lacking information on sampling effort. To compare trapping frequency and relative abundances we used capture records from more than four years, from seven species of rodents and two marsupial species collected by the Brazilian Plague Service. We calculated the trapping frequency index of each species as the proportion of trapped individuals per total of all individuals caught. We found that this trapping index was significantly correlated with a relative abundance index (number of captured individuals divided by number of trap nights. Our findings suggest that the proposed index may be useful for comparisons in situations where data on catching effort is lacking. The index may also provide a simple, though approximate quantification of relative local abundances, with possible applications in comparative studies (e.g. meta-analysis. We suggest that this index is used in studies that do not focus on obtaining accurate population parameter estimates, but which nonetheless contain data that can still offer a representative measure to compare local population abundances.

  9. Cross-year peer tutoring on internal medicine wards: results of a qualitative focus group analysis

    Directory of Open Access Journals (Sweden)

    Krautter M

    2014-09-01

    Full Text Available Markus Krautter,1 Sven Andreesen,2 Nadja Köhl-Hackert,2 Katja Hoffmann,3 Wolfgang Herzog,2 Christoph Nikendei2 1Department of Nephrology, University of Heidelberg, 2Department of General Internal Medicine and Psychosomatics, University of Heidelberg Medical Hospital, 3Department of General Practice and Health Services Research, University Hospital Heidelberg, Heidelberg, Germany Background: Peer-assisted learning (PAL has become a well-accepted teaching method within medical education. However, descriptions of on-ward PAL programs are rare. A focus group analysis of a newly established PAL program on an internal medicine ward was conducted to provide insights into PAL teaching from a student perspective.Purpose: To provide insights into students' experiences regarding their on-ward training with and without accompanying PAL tutors.Methods: A total of N=168 medical students in their sixth semester participated in the investigation (intervention group: N=88; control group: N=80. The intervention group took part in the PAL program, while the control group received standard on-ward training. There were seven focus groups with N=43 participants (intervention group: four focus groups, N=28 participants; control group: three focus groups, N=15 participants. The discussions were analyzed using content analysis.Results: The intervention group emphasized the role of the tutors as competent and well-trained teachers, most beneficial in supervising clinical skills. Tutors motivate students, help them to integrate into the ward team, and provide a non-fear-based working relationship whereby students' anxiety regarding working on ward decreases. The control group had to rely on autodidactic learning strategies when neither supervising physicians nor final-year students were available.Conclusion: On-ward PAL programs represent a particularly valuable tool for students' support in training clinical competencies on ward. The tutor–student working alliance

  10. Seasonal abundance of soil arthropods in relation to meteorological and edaphic factors in the agroecosystems of Faisalabad, Punjab, Pakistan.

    Science.gov (United States)

    Shakir, Muhammad Mussadiq; Ahmed, Sohail

    2015-05-01

    overall abundance in extreme temperature months while microarthropods in low-temperature months. CCA analysis revealed the occurrence of different arthropod groups in correspondence with different abiotic variables. Results are discussed in view of position of these arthropods as useful indicators under changing environmental conditions impacting agroecosystems in the study area.

  11. Bayesian analysis of interiors of HD 219134b, Kepler-10b, Kepler-93b, CoRoT-7b, 55 Cnc e, and HD 97658b using stellar abundance proxies

    Science.gov (United States)

    Dorn, Caroline; Hinkel, Natalie R.; Venturini, Julia

    2017-01-01

    Aims: Using a generalized Bayesian inference method, we aim to explore the possible interior structures of six selected exoplanets for which planetary mass and radius measurements are available in addition to stellar host abundances: HD 219134b, Kepler-10b, Kepler-93b, CoRoT-7b, 55 Cnc e, and HD 97658b. We aim to investigate the importance of stellar abundance proxies for the planetary bulk composition (namely Fe/Si and Mg/Si) on prediction of planetary interiors. Methods: We performed a full probabilistic Bayesian inference analysis to formally account for observational and model uncertainties while obtaining confidence regions of structural and compositional parameters of core, mantle, ice layer, ocean, and atmosphere. We determined how sensitive our parameter predictions depend on (1) different estimates of bulk abundance constraints and (2) different correlations of bulk abundances between planet and host star. Results: The possible interior structures and correlations between structural parameters differ depending on data and data uncertainty. The strongest correlation is generally found between size of rocky interior and water mass fraction. Given the data, possible water mass fractions are high, even for most potentially rocky planets (HD 219134b, Kepler-93b, CoRoT-7b, and 55 Cnc e with estimates up to 35%, depending on the planet). Also, the interior of Kepler-10b is best constrained with possible interiors similar to Earth. Among all tested planets, only the data of Kepler-10b and Kepler-93b allow to put a higher probability on the planetary bulk Fe/Si to be stellar compared to extremely sub-stellar. Conclusions: Although the possible ranges of interior structures are large, structural parameters and their correlations are constrained by the sparse data. The probability for the tested exoplanets to be Earth-like is generally very low. Furthermore, we conclude that different estimates of planet bulk abundance constraints mainly affect mantle composition and

  12. Group theoretical analysis of the H3+ +H2 ↔ H5+ reaction

    Science.gov (United States)

    Lin, Zhou

    2016-06-01

    The H3+ +H2 →H2 + H3+ proton transfer reaction is complicated due to the proton scrambling from the large amplitude motions in the H5+ intermediate. In order to understand this reaction, high-resolution spectroscopic studies are necessary for the reactants/products and the intermediate, and the group theoretical analysis is an essential aspect in the prediction and interpretation of these spectra. With five indistinguishable protons, H5+ is characterized using the G240 complete nuclear permutation-inversion (CNPI) group. For most of the configurations sampled by the reaction path, the feasible permutations depend on the distance between the H3+ and H2 fragments. Subgroups of G240 can be used to describe these feasible permutations. Specifically, we consider two limits of the molecular configurations. The equilibrium structure of H5+ , i.e., [H2 -H -H2 ]+, can be described using the G16 molecular symmetry group, while the dissociation products, i.e., H3+ ⋯H2 , require the G24 molecular symmetry group. In the present study, a group theoretical analysis is performed for both limits, providing the symmetries for the nuclear spins and rovibrational wave functions. Also, spectroscopic properties for [H2 -H -H2 ]+, particularly rovibrational couplings and electric dipole selection rules, as well as correlations of energy levels between [H2 -H -H2 ]+ and H3+ ⋯H2 , are obtained.

  13. Quantitative analysis of low-abundance serological proteins with peptide affinity-based enrichment and pseudo-multiple reaction monitoring by hybrid quadrupole time-of-flight mass spectrometry.

    Science.gov (United States)

    Kim, Kwang Hoe; Ahn, Yeong Hee; Ji, Eun Sun; Lee, Ju Yeon; Kim, Jin Young; An, Hyun Joo; Yoo, Jong Shin

    2015-07-02

    Multiple reaction monitoring (MRM) is commonly used for the quantitative analysis of proteins during mass pectrometry (MS), and has excellent specificity and sensitivity for an analyte in a complex sample. In this study, a pseudo-MRM method for the quantitative analysis of low-abundance serological proteins was developed using hybrid quadrupole time-of-flight (hybrid Q-TOF) MS and peptide affinity-based enrichment. First, a pseudo-MRM-based analysis using hybrid Q-TOF MS was performed for synthetic peptides selected as targets and spiked into tryptic digests of human serum. By integrating multiple transition signals corresponding to fragment ions in the full scan MS/MS spectrum of a precursor ion of the target peptide, a pseudo-MRM MS analysis of the target peptide showed an increased signal-to-noise (S/N) ratio and sensitivity, as well as an improved reproducibility. The pseudo-MRM method was then used for the quantitative analysis of the tryptic peptides of two low-abundance serological proteins, tissue inhibitor of metalloproteinase 1 (TIMP1) and tissue-type protein tyrosine phosphatase kappa (PTPκ), which were prepared with peptide affinity-based enrichment from human serum. Finally, this method was used to detect femtomolar amounts of target peptides derived from TIMP1 and PTPκ, with good coefficients of variation (CV 2.7% and 9.8%, respectively), using a few microliters of human serum from colorectal cancer patients. The results suggest that pseudo-MRM using hybrid Q-TOF MS, combined with peptide affinity-based enrichment, could become a promising alternative for the quantitative analysis of low-abundance target proteins of interest in complex serum samples that avoids protein depletion.

  14. Whole-genome single-nucleotide-polymorphism analysis for discrimination of Clostridium botulinum group I strains.

    Science.gov (United States)

    Gonzalez-Escalona, Narjol; Timme, Ruth; Raphael, Brian H; Zink, Donald; Sharma, Shashi K

    2014-04-01

    Clostridium botulinum is a genetically diverse Gram-positive bacterium producing extremely potent neurotoxins (botulinum neurotoxins A through G [BoNT/A-G]). The complete genome sequences of three strains harboring only the BoNT/A1 nucleotide sequence are publicly available. Although these strains contain a toxin cluster (HA(+) OrfX(-)) associated with hemagglutinin genes, little is known about the genomes of subtype A1 strains (termed HA(-) OrfX(+)) that lack hemagglutinin genes in the toxin gene cluster. We sequenced the genomes of three BoNT/A1-producing C. botulinum strains: two strains with the HA(+) OrfX(-) cluster (69A and 32A) and one strain with the HA(-) OrfX(+) cluster (CDC297). Whole-genome phylogenic single-nucleotide-polymorphism (SNP) analysis of these strains along with other publicly available C. botulinum group I strains revealed five distinct lineages. Strains 69A and 32A clustered with the C. botulinum type A1 Hall group, and strain CDC297 clustered with the C. botulinum type Ba4 strain 657. This study reports the use of whole-genome SNP sequence analysis for discrimination of C. botulinum group I strains and demonstrates the utility of this analysis in quickly differentiating C. botulinum strains harboring identical toxin gene subtypes. This analysis further supports previous work showing that strains CDC297 and 657 likely evolved from a common ancestor and independently acquired separate BoNT/A1 toxin gene clusters at distinct genomic locations.

  15. Multivariate analysis of chromatographic retention data as a supplementary means for grouping structurally related compounds.

    Science.gov (United States)

    Fasoula, S; Zisi, Ch; Sampsonidis, I; Virgiliou, Ch; Theodoridis, G; Gika, H; Nikitas, P; Pappa-Louisi, A

    2015-03-27

    In the present study a series of 45 metabolite standards belonging to four chemically similar metabolite classes (sugars, amino acids, nucleosides and nucleobases, and amines) was subjected to LC analysis on three HILIC columns under 21 different gradient conditions with the aim to explore whether the retention properties of these analytes are determined from the chemical group they belong. Two multivariate techniques, principal component analysis (PCA) and discriminant analysis (DA), were used for statistical evaluation of the chromatographic data and extraction similarities between chemically related compounds. The total variance explained by the first two principal components of PCA was found to be about 98%, whereas both statistical analyses indicated that all analytes are successfully grouped in four clusters of chemical structure based on the retention obtained in four or at least three chromatographic runs, which, however should be performed on two different HILIC columns. Moreover, leave-one-out cross-validation of the above retention data set showed that the chemical group in which an analyte belongs can be 95.6% correctly predicted when the analyte is subjected to LC analysis under the same four or three experimental conditions as the all set of analytes was run beforehand. That, in turn, may assist with disambiguation of analyte identification in complex biological extracts.

  16. Analysis of interest group influence on federal school meals regulations 1992 to 1996.

    Science.gov (United States)

    Hobbs, Suzanne Havala; Ricketts, Thomas C; Dodds, Janice M; Milio, Nancy

    2004-01-01

    Regulatory changes proposed by the US Department of Agriculture in 1994 promised to bring progressive changes to school meals. However, lobbying by interest groups resulted in substantial changes to the final rule. This analysis retrospectively examines the federal school meals policy-making process during 1992 to 1996. Key questions address why the policy changed and what the role of interest groups was in affecting the shape, pace, and direction of the policy. The study provides suggestions for using the experiences of 1992 to 1996 to guide future advocacy efforts and for adapting the approach for application to other food and nutrition policies.

  17. Phytochemical analysis, antioxidant activity, fatty acids composition, and functional group analysis of Heliotropium bacciferum.

    Science.gov (United States)

    Ahmad, Sohail; Ahmad, Shabir; Bibi, Ahtaram; Ishaq, Muhammad Saqib; Afridi, Muhammad Siddique; Kanwal, Farina; Zakir, Muhammad; Fatima, Farid

    2014-01-01

    Heliotropium bacciferum is paramount in medicinal perspective and belongs to Boraginaceae family. The crude and numerous fractions of leaves, stem, and roots of the plant were investigated for phytochemical analysis and DPPH radical scavenging activity. Phytochemical analysis of crude and fractions of the plant revealed the presence of alkaloids, saponins, tannins, steroids, terpenoids, flavonoids, glycosides, and phenols. The antioxidant (free radical scavenging) activity of various extracts of the Heliotropium bacciferum was resolute against 2,2-diphenyl-1-picrylhydrazyl (DPPH) radical with the avail of UV spectrophotometer at 517 nm. The stock solution (1000 mg/mL) and then several dilutions (50, 100, 150, 200, and 250 mg/mL) of the crude and fractions were prepared. Ascorbic acid was used as a standard. The plant leaves (52.59 ± 0.84 to 90.74 ± 1.00), stem (50.19 ± 0.92 to 89.42 ± 1.10), and roots extracts (49.19 ± 0.52 to 90.01 ± 1.02) divulged magnificent antioxidant activities. For the ascertainment of the fatty acid constituents a gas chromatograph hyphenated to mass spectrometer was used. The essential fatty acids for growth maintenance such as linoleic acid (65.70%), eicosadienoic acid (15.12%), oleic acid (8.72%), and palmitic acid (8.14%) were found in high percentage. The infrared spectra of all extracts of the plant were recorded by IR Prestige-21 FTIR model.

  18. Analysis of the first IPTA Mock Data Challenge by the EPTA timing data analysis working group

    CERN Document Server

    van Haasteren, Rutger; Vecchio, Alberto; Lassus, Antoine

    2013-01-01

    This is a summary of the methods we used to analyse the first IPTA Mock Data Challenge (MDC), and the obtained results. We have used a Bayesian analysis in the time domain, accelerated using the recently developed ABC-method which consists of a form of lossy linear data compression. The TOAs were first processed with Tempo2, where the design matrix was extracted for use in a subsequent Bayesian analysis. We used different noise models to analyse the datasets: no red noise, red noise the same for all pulsars, and individual red noise per pulsar. We sampled from the likelihood with four different samplers: "emcee", "t-walk", "Metropolis-Hastings", and "pyMultiNest". All but emcee agreed on the final result, with emcee failing due to artefacts of the high-dimensionality of the problem. An interesting issue we ran into was that the prior of all the 36 (red) noise amplitudes strongly affects the results. A flat prior in the noise amplitude biases the inferred GWB amplitude, whereas a flat prior in log-amplitude se...

  19. DISTRIBUTION OF CLASSICAL ABO BLOOD GROUPS AMONG TYPE 2 DIABETES MELLITUS PATIENTS : AN ANALYSIS

    Directory of Open Access Journals (Sweden)

    Rama Devi

    2015-04-01

    Full Text Available BACKGROUND: At present Diabetes Mellitus is a global phenomenon with the disease topping the list, comprising of about 32 million cases , India is in the forefront with 30% of the cases . The disease affects multiple organs and is a leading cause of much morbidity and mortality. Since it is a multi - factorial disease a major step would be to identify different associated factors, for an early diagnosis and prompt treatment. The ABO blood groups are often associated with several diseases, with one blood group more often seen with the patients of a particular disease. Our study will help to determine the frequency and distribution of blood groups in correlation with Diabetes Mellitus. MATERIAL & METHODS: This study was conducted in the Gandhi Medical College, Secunderabad, during a two year period. A random study involving every third diabetic patient was chosen and their blood group was determined. A total of 3 00 patients were selected with 150 male and 150 female patients. Another 300 volunteers who were not diabetics were chosen as controls and their blood groups were also determined. A pro - forma was given to both diabetics and controls which included the following variables : 1 . Demographic data 2. Blood grouping 3. Fasting and post prandial blood sugar. Following this, blood groups of both cohorts and controls were determined by antigen antibody agglutination method. Data analysis was do ne after data was entered into excel sheet and double checked for errors using SPSS Software RESULTS: Our a nalysis showed that O group was significantly more among diabetic patients when all patients were compared to control . ² there was a preponderance of blood group O among female diabetics and B among male diabetics. CONCLUSION: ABO blood groups have been determined in 300 diabetic patients and compared with the controls comprising of a series of 300 voluntary blood donors. When the results were analysed on the basis of sex, there was preponderance

  20. Chemical Abundances and Dust in the Halo Planetary Nebula K648 in M15: Its Origin and Evolution based on an Analysis of Multiwavelength Data

    CERN Document Server

    Otsuka, Masaaki; Tajitsu, Akito

    2015-01-01

    We report an investigation of the extremely metal-poor and C-rich planetary nebula (PN) K648 in the globular cluster M15 using the UV to far-IR data obtained using the Subaru, HST, FUSE, Spitzer, and Herschel. We determined the nebular abundances of ten elements. The enhancement of F ([F/H]=+0.96) is comparable to that of the halo PN BoBn1. The central stellar abundances of seven elements are determined. The stellar C/O ratio is similar to the nebular C/O ratios from recombination line and from collisionally excited line (CEL) within error, and the stellar Ne/O ratio is also close to the nebular CEL Ne/O ratio. We found evidence of carbonaceous dust grains and molecules including Class B 6-9 um and 11.3 um polycyclic aromatic hydrocarbons and the broad 11 um feature. The profiles of these bands are similar to those of the C-rich halo PNe H4-1 and BoBn1. Based on the theoretical model, we determined the physical conditions of the gas and dust and their masses, i.e., 0.048 Msun and 4.95x10^{-7} Msun, respective...

  1. Phytochemical Analysis, Antioxidant Activity, Fatty Acids Composition, and Functional Group Analysis of Heliotropium bacciferum

    Directory of Open Access Journals (Sweden)

    Sohail Ahmad

    2014-01-01

    Full Text Available Heliotropium bacciferum is paramount in medicinal perspective and belongs to Boraginaceae family. The crude and numerous fractions of leaves, stem, and roots of the plant were investigated for phytochemical analysis and DPPH radical scavenging activity. Phytochemical analysis of crude and fractions of the plant revealed the presence of alkaloids, saponins, tannins, steroids, terpenoids, flavonoids, glycosides, and phenols. The antioxidant (free radical scavenging activity of various extracts of the Heliotropium bacciferum was resolute against 2,2-diphenyl-1-picrylhydrazyl (DPPH radical with the avail of UV spectrophotometer at 517 nm. The stock solution (1000 mg/mL and then several dilutions (50, 100, 150, 200, and 250 mg/mL of the crude and fractions were prepared. Ascorbic acid was used as a standard. The plant leaves (52.59 ± 0.84 to 90.74 ± 1.00, stem (50.19 ± 0.92 to 89.42 ± 1.10, and roots extracts (49.19 ± 0.52 to 90.01 ± 1.02 divulged magnificent antioxidant activities. For the ascertainment of the fatty acid constituents a gas chromatograph hyphenated to mass spectrometer was used. The essential fatty acids for growth maintenance such as linoleic acid (65.70%, eicosadienoic acid (15.12%, oleic acid (8.72%, and palmitic acid (8.14% were found in high percentage. The infrared spectra of all extracts of the plant were recorded by IR Prestige-21 FTIR model.

  2. Effect of Habitat Complexity on Richness, Abundance and Distributional Pattern of Forest Birds

    Science.gov (United States)

    Ghadiri Khanaposhtani, Maryam; Kaboli, Mohammad; Karami, Mahmoud; Etemad, Vahid

    2012-08-01

    Structurally complex forests provide more diverse conditions in comparison to homogenous forests because of greater variety of microhabitats and trees. This study assesses the association of bird species richness, abundance, and distributional pattern with habitat complexity (HC) in Kheyrud Forest in the north of Iran. Birds were surveyed during spring 2009 by 100 point counts. In each point count six habitat features related to the index of HC were computed and scored from 0 to 3. Then the scores were summed and divided into two groups of low and high complexity, HC ≤ 6 and HC > 6, respectively. To compare bird richness and abundance in different HCs, a two sample t-test was used. Presence and absence of bird species at each plot as a dependent variable were compared with the vegetation characteristics as an independent variable by means of the Canonical Correspondence Analysis. The results revealed bird species richness and abundance were significantly higher in more complex habitats. Bird species can be divided into two groups, the first group including species which associated with late successional stages and the second group, species belonging to early successional stages. Numbers of birds belonging to the first group declined in less complex forests, whereas the numbers of birds belonging to the second group increased. At the stand scale, our results reveal that bird abundance and richness are strongly associated with the complexity of vegetation structure in the study area.

  3. Random pinning glass transition: hallmarks, mean-field theory and renormalization group analysis.

    Science.gov (United States)

    Cammarota, Chiara; Biroli, Giulio

    2013-03-28

    We present a detailed analysis of glass transitions induced by pinning particles at random from an equilibrium configuration. We first develop a mean-field analysis based on the study of p-spin spherical disordered models and then obtain the three-dimensional critical behavior by the Migdal-Kadanoff real space renormalization group method. We unveil the important physical differences with the case in which particles are pinned from a random (or very high temperature) configuration. We contrast the pinning particles approach to the ones based on biasing dynamical trajectories with respect to their activity and on coupling to equilibrium configurations. Finally, we discuss numerical and experimental tests.

  4. Late Embryogenesis Abundant Proteins

    NARCIS (Netherlands)

    Shih, M.D.; Hoekstra, F.A.; Hsing, Y.I.C.

    2008-01-01

    During the late maturation stage of seed development, water content decreases greatly. One of the most striking characteristics of mature orthodox seeds is their ability to withstand severe desiccation. Mechanisms of plant drought/desiccation tolerance have been studied by numerous groups, and a bro

  5. Analysis of a support group for children of parents with mental illnesses: managing stressful situations.

    Science.gov (United States)

    Gladstone, Brenda M; McKeever, Patricia; Seeman, Mary; Boydell, Katherine M

    2014-09-01

    We report an ethnographic analysis of a psycho-education and peer-support program for school-aged children of parents with mental illnesses. We conducted a critical discourse analysis of the program manual and observed group interactions to understand whether children shared program goals predetermined by adults, and how, or if, the intervention was responsive to their needs. Children were expected to learn mental illness information because "knowledge is power," and to express difficult feelings about being a child of a mentally ill parent that was risky. Participants used humor to manage group expectations, revealing how they made sense of their parents' problems, as well as their own. Suggestions are made for determining good mental health literacy based on children's preferences for explaining circumstances in ways they find relevant, and for supporting children's competencies to manage relationships that are important to them. © The Author(s) 2014.

  6. Applications of Group Analysis to the Three-Dimensional Equations of Fluids with Internal Inertia

    CERN Document Server

    Siriwat, Piyanuch

    2008-01-01

    Group classification of the three-dimensional equations describing flows of fluids with internal inertia, where the potential function $W= W(\\rho,\\dot{\\rho})$, is presented. The given equations include such models as the non-linear one-velocity model of a bubbly fluid with incompressible liquid phase at small volume concentration of gas bubbles, and the dispersive shallow water model. These models are obtained for special types of the function $W(\\rho,\\dot{\\rho})$. Group classification separates out the function $W(\\rho,\\dot{\\rho})$ at 15 different cases. Another part of the manuscript is devoted to one class of partially invariant solutions. This solution is constructed on the base of all rotations. In the gas dynamics such class of solutions is called the Ovsyannikov vortex. Group classification of the system of equations for invariant functions is obtained. Complete analysis of invariant solutions for the special type of a potential function is given.

  7. Applications of Group Analysis to the Three-Dimensional Equations of Fluids with Internal Inertia

    Directory of Open Access Journals (Sweden)

    Sergey V. Meleshko

    2008-02-01

    Full Text Available Group classification of the three-dimensional equations describing flows of fluids with internal inertia, where the potential function W = W(ρ,ρ·, is presented. The given equations include such models as the non-linear one-velocity model of a bubbly fluid with incompressible liquid phase at small volume concentration of gas bubbles, and the dispersive shallow water model. These models are obtained for special types of the function W(ρ,ρ·. Group classification separates out the function W(ρ,ρ· at 15 different cases. Another part of the manuscript is devoted to one class of partially invariant solutions. This solution is constructed on the base of all rotations. In the gas dynamics such class of solutions is called the Ovsyannikov vortex. Group classification of the system of equations for invariant functions is obtained. Complete analysis of invariant solutions for the special type of a potential function is given.

  8. SPM analysis on groups of single aerosol particles around steel plant

    Institute of Scientific and Technical Information of China (English)

    沙因; 王安璞; 等

    1996-01-01

    Several methods for preparing samples of dispersed single aeroslo particles used in scanning proton microprobe(SPM) analysis were tested.Many elements such as Al,Si,S,Cl,Ca,Ti,Cr,Mn,Fe,Ni,Cu and Zn in the groups of different single aerosol particles from the Capital Steel Plant area were analyzed by SPM,The distributions of elemental contents in the group of single particles were mapped with three dimensional contour and the isometric.A new approach to study the group of different single aerosol particles for air pollution is developed in the present work.The results are significant to assessing the environmental impact of the dispersed single aerosol particles.

  9. Symmetries and Laplacians introduction to harmonic analysis, group representations and applications

    CERN Document Server

    Gurarie, D

    1992-01-01

    Designed as an introduction to harmonic analysis and group representations,this book covers a wide range of topics rather than delving deeply into anyparticular one. In the words of H. Weyl ...it is primarily meant forthe humble, who want to learn as new the things set forth therein, rather thanfor the proud and learned who are already familiar with the subject and merelylook for quick and exact information.... The main objective is tointroduce the reader to concepts, ideas, results and techniques that evolvearound symmetry-groups, representations and Laplacians. Morespecifically, the main interest concerns geometrical objects and structures{X}, discrete or continuous, that possess sufficiently large symmetrygroup G, such as regular graphs (Platonic solids), lattices, andsymmetric Riemannian manifolds. All such objects have a natural Laplacian&Dgr;, a linear operator on functions over X, invariant underthe group action. There are many problems associated with Laplacians onX, such as continuous or discrete...

  10. Spectral Analysis of Transition Operators, Automata Groups and Translation in BBS

    Science.gov (United States)

    Kato, Tsuyoshi; Tsujimoto, Satoshi; Zuk, Andrzej

    2016-06-01

    We give the automata that describe time evolution rules of the box-ball system with a carrier. It can be shown by use of tropical geometry that such systems are ultradiscrete analogues of KdV equation. We discuss their relation with the lamplighter group generated by an automaton. We present spectral analysis of the stochastic matrices induced by these automata and verify their spectral coincidence.

  11. Group Analysis of Nonlinear Internal Waves in Oceans. I: Self-adjointness, conservation laws, invariant solutions

    CERN Document Server

    Ibragimov, Nail H

    2011-01-01

    The paper is devoted to the group analysis of equations of motion of two-dimensional uniformly stratified rotating fluids used as a basic model in geophysical fluid dynamics. It is shown that the nonlinear equations in question have a remarkable property to be self-adjoint. This property is crucial for constructing conservation laws provided in the present paper. Invariant solutions are constructed using certain symmetries. The invariant solutions are used for defining internal wave beams.

  12. Phase structure analysis of CP(N-1) model using Tensor renormalization group

    CERN Document Server

    Kawauchi, Hikaru

    2016-01-01

    The phase structure of the lattice CP($N-1$) model in two dimensions is analyzed by the tensor renormalization group (TRG) method. We focus on the case $N=2$ and compare the numerical result of the TRG method with that of the strong-coupling analysis in the presence of the $\\theta$ term and investigate the nature of the phase transition at $\\theta=\\pi$.

  13. "My YAP Family": Analysis of a Facebook Group for Young Adults Living with HIV.

    Science.gov (United States)

    Gaysynsky, Anna; Romansky-Poulin, Kathryn; Arpadi, Stephen

    2015-06-01

    Little research exists regarding the use of social networking sites, like Facebook, for improving patient well-being. The aim of this study was to evaluate a private Facebook group established for members of an HIV clinic's young adult program. This study employed directed content analysis to examine the types and frequencies of interactions observable in the 3,838 posts and comments that appeared on the Facebook group page between March 1, 2011 and July 1, 2012. Analysis revealed that a large percentage (41.7 %) of the content was classified as "administrative/engagement in group" and functioned to enhance the operations of the program as a whole. Additionally, positive interactions were frequently observed, especially socializing (24.8 %), banter (20.2 %), and offers of social support (15.1 %). Emotional support was the most frequent type of support requested, while esteem support was the most commonly provided form of support. The results of this study demonstrate that a Facebook group can be a means of providing patients with social support and positive social interaction and can improve services for young adults with HIV.

  14. Carboxylic acid functional group analysis using constant neutral loss scanning-mass spectrometry

    Energy Technology Data Exchange (ETDEWEB)

    Dron, Julien [Laboratoire de Chimie et Environnement, Marseille Universites (case 29), 3 place Victor Hugo, 13331 Marseille Cedex 3 (France)], E-mail: julien.dron@up.univ-mrs.fr; Eyglunent, Gregory; Temime-Roussel, Brice; Marchand, Nicolas; Wortham, Henri [Laboratoire de Chimie et Environnement, Marseille Universites (case 29), 3 place Victor Hugo, 13331 Marseille Cedex 3 (France)

    2007-12-12

    The present study describes the development of a new analytical technique for the functional group determination of the carboxylic moiety using atmospheric pressure chemical ionization-mass spectrometry (APCI-MS/MS) operated in the constant neutral loss scanning (CNLS) mode. Carboxylic groups were first derivatized into their corresponding methyl esters by reacting with BF{sub 3}/methanol mix and the reaction mixture was then directly injected into the APCI chamber. The loss of methanol (m/z = 32 amu) resulting from the fragmentation of the protonated methyl esters was then monitored. Applying this method together with a statistical approach to reference mixtures containing 31 different carboxylic acids at randomly calculated concentrations demonstrated its suitability for quantitative functional group measurements with relative standard deviations below 15% and a detection limit of 0.005 mmol L{sup -1}. Its applicability to environmental matrices was also shown through the determination of carboxylic acid concentrations inside atmospheric aerosol samples. To the best of our knowledge, it is the first time that the tandem mass spectrometry was successfully applied to functional group analysis, offering great perspectives in the characterization of complex mixtures which are prevailing in the field of environmental analysis as well as in the understanding of the chemical processes occurring in these matrices.

  15. In Abundance: Networked Participatory Practices as Scholarship

    Science.gov (United States)

    Stewart, Bonnie E.

    2015-01-01

    In an era of knowledge abundance, scholars have the capacity to distribute and share ideas and artifacts via digital networks, yet networked scholarship often remains unrecognized within institutional spheres of influence. Using ethnographic methods including participant observation, interviews, and document analysis, this study investigates…

  16. Genetic analysis of three US population groups using an X-chromosomal STR decaplex.

    Science.gov (United States)

    Gomes, Iva; Prinz, Mechthild; Pereira, Rui; Meyers, Carole; Mikulasovich, Rebecca S; Amorim, António; Carracedo, Angel; Gusmão, Leonor

    2007-05-01

    An X-chromosomal multiplex amplifying ten short tandem repeats (STRs) in one single PCR reaction was developed and optimized in this work. The X-STRs included were DXS8378, DXS9898, DXS8377, HPRTB, GATA172D05, DXS7423, DXS6809, DXS7132, DXS101, and DXS6789. Decaplex performance was tested on 377 male samples from three United States population groups, namely, 130 African Americans, 104 Asians, and 143 Hispanics. DXS8377 was the most polymorphic locus across all three populations, whereas DXS7423 was the least informative marker. Genetic distance analysis (R (ST) and F (ST)) performed for the three populations residing in New York showed significant genetic distances between population groups for most pairwise comparisons, except for HPRTB, DXS6809, and DXS7132. When testing linkage disequilibrium for all pairs of loci in the three groups, no significant association was found between any pair of the loci studied, after applying Bonferroni correction. The high values for the average probability of excluding a random man obtained in all three populations when both mother and daughter are tested or when father/daughter relationships are evaluated support the potential of this decaplex system in kinship analysis. Also, the overall high power of discrimination values for samples of female and male origin, confirms the usefulness of this decaplex system in identification analysis. As expected, results also support the use of independent databases comprising these ten X-linked loci for the three US populations evaluated.

  17. Abundance of sea kraits correlates with precipitation.

    Science.gov (United States)

    Lillywhite, Harvey B; Tu, Ming-Chung

    2011-01-01

    Recent studies have shown that sea kraits (Laticauda spp.)--amphibious sea snakes--dehydrate without a source of fresh water, drink only fresh water or very dilute brackish water, and have a spatial distribution of abundance that correlates with freshwater sites in Taiwan. The spatial distribution correlates with sites where there is a source of fresh water in addition to local precipitation. Here we report six years of longitudinal data on the abundance of sea kraits related to precipitation at sites where these snakes are normally abundant in the coastal waters of Lanyu (Orchid Island), Taiwan. The number of observed sea kraits varies from year-to-year and correlates positively with previous 6-mo cumulative rainfall, which serves as an inverse index of drought. Grouped data for snake counts indicate that mean abundance in wet years is nearly 3-fold greater than in dry years, and this difference is significant. These data corroborate previous findings and suggest that freshwater dependence influences the abundance or activity of sea kraits on both spatial and temporal scales. The increasing evidence for freshwater dependence in these and other marine species have important implications for the possible impact of climate change on sea snake distributions.

  18. Abundance of sea kraits correlates with precipitation.

    Directory of Open Access Journals (Sweden)

    Harvey B Lillywhite

    Full Text Available Recent studies have shown that sea kraits (Laticauda spp.--amphibious sea snakes--dehydrate without a source of fresh water, drink only fresh water or very dilute brackish water, and have a spatial distribution of abundance that correlates with freshwater sites in Taiwan. The spatial distribution correlates with sites where there is a source of fresh water in addition to local precipitation. Here we report six years of longitudinal data on the abundance of sea kraits related to precipitation at sites where these snakes are normally abundant in the coastal waters of Lanyu (Orchid Island, Taiwan. The number of observed sea kraits varies from year-to-year and correlates positively with previous 6-mo cumulative rainfall, which serves as an inverse index of drought. Grouped data for snake counts indicate that mean abundance in wet years is nearly 3-fold greater than in dry years, and this difference is significant. These data corroborate previous findings and suggest that freshwater dependence influences the abundance or activity of sea kraits on both spatial and temporal scales. The increasing evidence for freshwater dependence in these and other marine species have important implications for the possible impact of climate change on sea snake distributions.

  19. The use of an online support group for neuromuscular disorders: a thematic analysis of message postings.

    Science.gov (United States)

    Meade, Oonagh; Buchanan, Heather; Coulson, Neil

    2017-06-08

    People affected by neuromuscular disorders can experience adverse psychosocial consequences and difficulties accessing information and support. Online support groups provide new opportunities for peer support. The aim of this study was to understand how contributors used the message board function of a newly available neuromuscular disorders online support group. Message postings (n = 1951) from the first five months of the message board of a newly formed online support group for neuromuscular disorders hosted by a charitable organization were analyzed using inductive thematic analysis. Members created a sense of community through disclosing personal information, connecting with people with similar illness experiences or interests, welcoming others and sharing aspirations for the development of a resourceful community. Experiences, emotional reactions and support were shared in relation to: delayed diagnosis; symptom interpretation; illness management and progression; the isolating impact of rare disorders; and the influence of social and political factors on illness experiences. This study provided a novel insight into individuals' experiences of accessing a newly available online support group for rare conditions hosted by a charitable organization. The findings highlight how the online support group provided an important peer support environment for members to connect with others, exchange information and support and engender discussion on political and social issues unique to living with often-rare neuromuscular disorders. Online support groups may therefore provide an important and easily accessible support outlet for people with neuromuscular disorders as well as a platform for empowering members to raise awareness about the impact of living with these conditions. Further research is needed to examine member motivations for using such groups and any effects of participation in greater detail. Implications for rehabilitation Online support groups may

  20. History of my Father Mogorotoɨ ‘Blue Macaw’: Words of the Ritual of the Fruits, which Come to Us as Food in Abundance, as Told by the Okaina Ethnic Group

    Directory of Open Access Journals (Sweden)

    Anastasia Candre

    2011-01-01

    Full Text Available Bilingual Witoto-Spanish text about the origin and stages of the yuakɨ ritual dance (ritual of the fruits, which is celebrated by the Witoto and other neighboring groups of the Caqueta-Putumayo interriverine region in the Colombo-Peruvian Amazon. This text was written by an indigenous woman in the buue dialect of the Witoto language from the memories of the speeches of her father in the “yard of tobacco and coca” when she was a child.

  1. Small Group Learning in Medical Education: A Second Look at the Springer, Stanne, and Donovan Meta-Analysis.

    Science.gov (United States)

    Colliver, Jerry A.; Feltovich, Paul J.; Verhulst, Steven J.

    2003-01-01

    Reviews the studies on which a meta-analysis by Springer, Stanne, and Donovan (1999) were based; the meta-analysis had concluded that small group learning in science, mathematics, engineering, and technology education is effective. Concludes that the meta-analysis' call for more widespread implementation of small group learning is not supported.…

  2. Small Group Learning in Medical Education: A Second Look at the Springer, Stanne, and Donovan Meta-Analysis.

    Science.gov (United States)

    Colliver, Jerry A.; Feltovich, Paul J.; Verhulst, Steven J.

    2003-01-01

    Reviews the studies on which a meta-analysis by Springer, Stanne, and Donovan (1999) were based; the meta-analysis had concluded that small group learning in science, mathematics, engineering, and technology education is effective. Concludes that the meta-analysis' call for more widespread implementation of small group learning is not supported.…

  3. Molecular and microscopic analysis of the gut contents of abundant rove beetle species (Coleoptera, Staphylinidae in the boreal balsam fir forest of Quebec, Canada

    Directory of Open Access Journals (Sweden)

    Jan Klimaszewski

    2013-11-01

    Full Text Available Experimental research on beetle responses to removal of logging residues following clearcut harvesting in the boreal balsam fir forest of Quebec revealed several abundant rove beetle (Staphylinidae species potentially important for long-term monitoring. To understand the trophic affiliations of these species in forest ecosystems, it was necessary to analyze their gut contents. We used microscopic and molecular (DNA methods to identify the gut contents of the following rove beetles: Atheta capsularis Klimaszew­ski, Atheta klagesi Bernhauer, Oxypoda grandipennis (Casey, Bryophacis smetanai Campbell, Ischnosoma longicorne (Mäklin, Mycetoporus montanus Luze, Tachinus frigidus Erichson, Tachinus fumipennis (Say, Tachinus quebecensis Robert, and Pseudopsis subulata Herman. We found no apparent arthropod fragments within the guts; however, a number of fungi were identified by DNA sequences, including filamentous fungi and budding yeasts [Ascomycota: Candida derodonti Suh & Blackwell (accession number FJ623605, Candida mesenterica (Geiger Diddens & Lodder (accession number FM178362, Candida railenensis Ramirez and Gonzáles (accession number JX455763, Candida sophie-reginae Ramirez & González (accession number HQ652073, Candida sp. (accession number AY498864, Pichia delftensis Beech (accession number AY923246, Pichia membranifaciens Hansen (accession number JQ26345, Pichia misumaiensis Y. Sasaki and Tak. Yoshida ex Kurtzman 2000 (accession number U73581, Pichia sp. (accession number AM261630, Cladosporium sp. (accession number KF367501, Acremonium psammosporum W. Gams (accession number GU566287, Alternaria sp. (accession number GU584946, Aspergillus versicolor Bubak (accession number AJ937750, and Aspergillus amstelodami (L. Mangin Thom and Church (accession number HQ728257]. In addition, two species of bacteria [Bradyrhizobium japonicum (KirchnerJordan (accession number BA000040 and Serratia marcescens Bizio accession number CP003942] were found in

  4. Analysis of admixture and genetic structure of two Native American groups of Southern Argentinean Patagonia.

    Science.gov (United States)

    Sala, Andrea; Corach, Daniel

    2014-03-01

    Argentinean Patagonia is inhabited by people that live principally in urban areas and by small isolated groups of individuals that belong to indigenous aboriginal groups; this territory exhibits the lowest population density of the country. Mapuche and Tehuelche (Mapudungun linguistic branch), are the only extant Native American groups that inhabit the Argentinean Patagonian provinces of Río Negro and Chubut. Fifteen autosomal STRs, 17 Y-STRs, mtDNA full length control region sequence and two sets of Y and mtDNA-coding region SNPs were analyzed in a set of 434 unrelated individuals. The sample set included two aboriginal groups, a group of individuals whose family name included Native American linguistic root and urban samples from Chubut, Río Negro and Buenos Aires provinces of Argentina. Specific Y Amerindian haplogroup Q1 was found in 87.5% in Mapuche and 58.82% in Tehuelche, while the Amerindian mtDNA haplogroups were present in all the aboriginal sample contributors investigated. Admixture analysis performed by means of autosomal and Y-STRs showed the highest degree of admixture in individuals carrying Mapuche surnames, followed by urban populations, and finally by isolated Native American populations as less degree of admixture. The study provided novel genetic information about the Mapuche and Tehuelche people and allowed us to establish a genetic correlation among individuals with Mapudungun surnames that demonstrates not only a linguistic but also a genetic relationship to the isolated aboriginal communities, representing a suitable proxy indicator for assessing genealogical background.

  5. Statistical group differences in anatomical shape analysis using Hotelling T2 metric

    Science.gov (United States)

    Styner, Martin; Oguz, Ipek; Xu, Shun; Pantazis, Dimitrios; Gerig, Guido

    2007-03-01

    Shape analysis has become of increasing interest to the neuroimaging community due to its potential to precisely locate morphological changes between healthy and pathological structures. This manuscript presents a comprehensive set of tools for the computation of 3D structural statistical shape analysis. It has been applied in several studies on brain morphometry, but can potentially be employed in other 3D shape problems. Its main limitations is the necessity of spherical topology. The input of the proposed shape analysis is a set of binary segmentation of a single brain structure, such as the hippocampus or caudate. These segmentations are converted into a corresponding spherical harmonic description (SPHARM), which is then sampled into a triangulated surfaces (SPHARM-PDM). After alignment, differences between groups of surfaces are computed using the Hotelling T2 two sample metric. Statistical p-values, both raw and corrected for multiple comparisons, result in significance maps. Additional visualization of the group tests are provided via mean difference magnitude and vector maps, as well as maps of the group covariance information. The correction for multiple comparisons is performed via two separate methods that each have a distinct view of the problem. The first one aims to control the family-wise error rate (FWER) or false-positives via the extrema histogram of non-parametric permutations. The second method controls the false discovery rate and results in a less conservative estimate of the false-negatives. Prior versions of this shape analysis framework have been applied already to clinical studies on hippocampus and lateral ventricle shape in adult schizophrenics. The novelty of this submission is the use of the Hotelling T2 two-sample group difference metric for the computation of a template free statistical shape analysis. Template free group testing allowed this framework to become independent of any template choice, as well as it improved the

  6. Identification of different nutritional status groups in institutionalized elderly people by cluster analysis.

    Science.gov (United States)

    López-Contreras, María José; López, Maria Ángeles; Canteras, Manuel; Candela, María Emilia; Zamora, Salvador; Pérez-Llamas, Francisca

    2014-03-01

    To apply a cluster analysis to groups of individuals of similar characteristics in an attempt to identify undernutrition or the risk of undernutrition in this population. A cross-sectional study. Seven public nursing homes in the province of Murcia, on the Mediterranean coast of Spain. 205 subjects aged 65 and older (131 women and 74 men). Dietary intake (energy and nutrients), anthropometric (body mass index, skinfold thickness, mid-arm muscle circumference, mid-arm muscle area, corrected arm muscle area, waist to hip ratio) and biochemical and haematological (serum albumin, transferrin, total cholesterol, total lymphocyte count). Variables were analyzed by cluster analysis. The results of the cluster analysis, including intake, anthropometric and analytical data showed that, of the 205 elderly subjects, 66 (32.2%) were over - weight/obese, 72 (35.1%) had an adequate nutritional status and 67 (32.7%) were undernourished or at risk of undernutrition. The undernourished or at risk of undernutrition group showed the lowest values for dietary intake and the anthropometric and analytical parameters measured. Our study shows that cluster analysis is a useful statistical method for assessing the nutritional status of institutionalized elderly populations. In contrast, use of the specific reference values frequently described in the literature might fail to detect real cases of undernourishment or those at risk of undernutrition. Copyright AULA MEDICA EDICIONES 2014. Published by AULA MEDICA. All rights reserved.

  7. ANALYSIS OF RAILWAY USER TRAVEL BEHAVIOUR PATTERNS OF DIFFERENT AGE GROUPS

    Directory of Open Access Journals (Sweden)

    Takamasa AKIYAMA

    2009-01-01

    Full Text Available In recent years, there have been requirments for a transport environment that will foster the development of safe, comfortable townships. The study of urban activities amid an aging society and effective use of public transport modes in addressing environmental problems have become particularly important issues. This study analyzes travel behaviour patterns of varying age groups using urban railways in order to examine the relationship between urban public transport use and urban activities. specifically, it analyzes the composition of urban activity and travel behaviour patterns among urban railway users in the Keihanshin (Kyoto-Osaka-Kobe metropolitan area. This paper looks at urban activities within aging societies and identifies the differences in travel behaviour of railway users by separating them into young, middle aged and senior citizen age groups. Analysis makes particular use of the Railway station Database, which is a compilation of existing studies into attributes of railway stations and their surroundings, and results of person trip surveys. Rail use behaviour characteristics have been sorted by age group because mobility via urban railway systems is varied by age group. As a result, differences in railway usage patterns (travel objectives, distance and time, and number of transfers, etc. have been identified and so too have differences in urban activity patterns related to free activities (shopping, recreation. Furthermore, the study developed a travel behaviour pattern estimation model which is capable of categorizing specific transport behaviour patterns and estimating rail users and transport behaviour patterns from the relationship with areas surrounding railway stations to ensure future mobility by public transport for older age groups. The results make it possible to put forward proposals for urban rail services that will facilitate urban activities for the different age groups. Eventually, it will be possible to understand

  8. Phylogenetic diversity of the Bacillus pumilus group and the marine ecotype revealed by multilocus sequence analysis.

    Science.gov (United States)

    Liu, Yang; Lai, Qiliang; Dong, Chunming; Sun, Fengqin; Wang, Liping; Li, Guangyu; Shao, Zongze

    2013-01-01

    Bacteria closely related to Bacillus pumilus cannot be distinguished from such other species as B. safensis, B. stratosphericus, B. altitudinis and B. aerophilus simply by 16S rRNA gene sequence. In this report, 76 marine strains were subjected to phylogenetic analysis based on 7 housekeeping genes to understand the phylogeny and biogeography in comparison with other origins. A phylogenetic tree based on the 7 housekeeping genes concatenated in the order of gyrB-rpoB-pycA-pyrE-mutL-aroE-trpB was constructed and compared with trees based on the single genes. All these trees exhibited a similar topology structure with small variations. Our 79 strains were divided into 6 groups from A to F; Group A was the largest and contained 49 strains close to B. altitudinis. Additional two large groups were presented by B. safensis and B. pumilus respectively. Among the housekeeping genes, gyrB and pyrE showed comparatively better resolution power and may serve as molecular markers to distinguish these closely related strains. Furthermore, a recombinant phylogenetic tree based on the gyrB gene and containing 73 terrestrial and our isolates was constructed to detect the relationship between marine and other sources. The tree clearly showed that the bacteria of marine origin were clustered together in all the large groups. In contrast, the cluster belonging to B. safensis was mainly composed of bacteria of terrestrial origin. Interestingly, nearly all the marine isolates were at the top of the tree, indicating the possibility of the recent divergence of this bacterial group in marine environments. We conclude that B. altitudinis bacteria are the most widely spread of the B. pumilus group in marine environments. In summary, this report provides the first evidence regarding the systematic evolution of this bacterial group, and knowledge of their phylogenetic diversity will help in the understanding of their ecological role and distribution in marine environments.

  9. Validation of the Resilience Scale for Adolescents (READ) in Ireland: a multi-group analysis.

    Science.gov (United States)

    Kelly, Yvonne; Fitzgerald, Amanda; Dooley, Barbara

    2016-04-29

    Resilience is a process reflecting positive adaptation in the face of adversity. The Resilience Scale for Adolescence (READ) incorporates intrapersonal and interpersonal protective factors mapping onto the three salient domains of resilience, including individual, family and external environment. This study investigated the validity and reliability of the READ by means of factor analysis, multi-group analysis, inter-correlations and internal consistency measures. Participants were 6085 young people in Ireland aged 12-18 years. Participants completed the My World Survey - Second Level (MWS-SL), assessing risk and protective factors of mental health. Confirmatory factor analysis validated the original five-factor structure of the READ including Personal Competence, Social Competence, Structured Style, Family Cohesion, and Social Resources, χ(2) (340) = 6146.02, p resilience factors among adolescents in Ireland, demonstrating its applicability in a different cultural context and with a wider age range of adolescents. Copyright © 2016 John Wiley & Sons, Ltd.

  10. Oxygen abundance maps of CALIFA galaxies

    CERN Document Server

    Zinchenko, I A; Grebel, E K; Sanchez, S F; Vilchez, J M

    2016-01-01

    We construct maps of the oxygen abundance distribution across the disks of 88 galaxies using CALIFA data release 2 (DR2) spectra. The position of the center of a galaxy (coordinates on the plate) were also taken from the CALIFA DR2. The galaxy inclination, the position angle of the major axis, and the optical radius were determined from the analysis of the surface brightnesses in the SDSS $g$ and $r$ bands of the photometric maps of SDSS data release 9. We explore the global azimuthal abundance asymmetry in the disks of the CALIFA galaxies and the presence of a break in the radial oxygen abundance distribution. We found that there is no significant global azimuthal asymmetry for our sample of galaxies, i.e., the asymmetry is small, usually lower than 0.05 dex. The scatter in oxygen abundances around the abundance gradient has a comparable value, $\\lesssim 0.05$ dex. A significant (possibly dominant) fraction of the asymmetry can be attributed to the uncertainties in the geometrical parameters of these galaxie...

  11. The iron abundance of the Magellanic Bridge

    CERN Document Server

    Dufton, P L; Thompson, H M A; Street, R A

    2008-01-01

    High-resolution HST ultra-violet spectra for five B-type stars in the Magellanic Bridge and in the Large and Small Magellanic Clouds have been analysed to estimate their iron abundances. Those for the Clouds are lower than estimates obtained from late-type stars or the optical lines in B-type stars by approximately 0.5 dex. This may be due to systematic errors possibly arising from non-LTE effects or from errors in the atomic data as similar low Fe abundances having previously been reported from the analysis of the ultra-violet spectra of Galactic early-type stars. The iron abundance estimates for all three Bridge targets appear to be significantly lower than those found for the SMC and LMC by approximately -0.5 dex and -0.8 dex respectively and these differential results should not be affected by any systematic errors present in the absolute abundance estimates. These differential iron abundance estimates are consistent with the underabundances for C, N, O, Mg and Si of approximately -1.1 dex relative to our...

  12. The solar photospheric abundance of zirconium

    CERN Document Server

    Caffau, Elisabetta; Ludwig, Hans-Günter; Bonifacio, Piercarlo; Steffen, Matthias

    2010-01-01

    Zirconium (Zr), together with strontium and yttrium, is an important element in the understanding of the Galactic nucleosynthesis. In fact, the triad Sr-Y-Zr constitutes the first peak of s-process elements. Despite its general relevance not many studies of the solar abundance of Zr were conducted. We derive the zirconium abundance in the solar photosphere with the same CO5BOLD hydrodynamical model of the solar atmosphere that we previously used to investigate the abundances of C-N-O. We review the zirconium lines available in the observed solar spectra and select a sample of lines to determine the zirconium abundance, considering lines of neutral and singly ionised zirconium. We apply different line profile fitting strategies for a reliable analysis of Zr lines that are blended by lines of other elements. The abundance obtained from lines of neutral zirconium is very uncertain because these lines are commonly blended and weak in the solar spectrum. However, we believe that some lines of ionised zirconium are...

  13. A Catalog of Helium Abundance Indicators from Globular Cluster Photometry

    CERN Document Server

    Sandquist, E L

    1999-01-01

    For each of the three indicators used, we have conducted a thorough error analysis, and identified systematic errors in the computational procedures. For the population ratio R = N_HB / N_RGB, we find that there is no evidence of a trend with metallicity, although there appears to be real scatter in the values derived. Although this indicator is the one best able to provide useful absolute helium abundances, the mean value is Y approximately 0.20, indicating the probable presence of additional systematic error. For the magnitude difference from the horizontal branch to the main sequence Delta and the RR Lyrae mass-luminosity exponent A, it is only possible to reliably determine relative helium abundances. This is due to continuing uncertainties in the absolute metallicity scale for Delta, and uncertainty in the RR Lyrae temperature scale for A. Both indicators imply that the helium abundance is approximately constant as a function of [Fe/H]. According to the A indicator, both Oosterhoff I and II group cluster...

  14. Breakthroughs in the biodiversity, biogeography, biostratigraphy, and basin analysis of the Beaufort group

    Science.gov (United States)

    Hancox, P. J.; Rubidge, B. S.

    2001-08-01

    Over the past decade researchers working on the rocks of the Beaufort Group in the main Karoo Basin of South Africa have vastly increased our understanding of this important Permo-Triassic sequence. Many new fossil forms have been discovered, allowing for breakthroughs into the biodiversity, biogeography and biostratigraphy of the group. Taxonomic and phylogenetic advances are many and varied, and cover most of the vertebrate taxa, but with emphasis placed on the temnospondyl amphibians, archosauriforms and non-mammalian synapsids, in particular the anomodontia. Biostratigraphic breakthroughs have centered on the Middle Permian Eodicynodon and Tapinocephalus assemblage zones, the Late Permian Dicynodon Assemblage Zone, and the Triassic Lystrosaurus and Cynognathus assemblage zones. Correlation of these biozones with better dated sequences in Europe, Russia and China has allowed for many chronostratigraphic refinements, which are in turn vital for sequence stratigraphical analysis of the basin fill. Based on fossil data, both the lower (Ecca-Beaufort) and upper (Beaufort-Molteno) contacts of the group have been proved to be highly diachronous. The refined chronostratigraphic framework has also allowed for a better analysis of the basin evolution through time, particularly in terms of the correlation of external stimuli that affect basin sedimentation patterns.

  15. Iron Abundance in Hydrogen-Rich Central Stars of Planetary Nebulae

    CERN Document Server

    Hoffmann, A I D; Kruk, J W; Rauch, T; Traulsen, I; Werner, K

    2004-01-01

    We report on an on-going analysis of high-resolution UV spectra of hot hydrogen-rich central stars of planetary nebulae (CSPN), obtained with the Hubble Space Telescope and FUSE. Since UV spectra of many CSPN are dominated by Fe and Ni lines, we intend to use them as temperature indicators to check the CSPN temperature scale we have derived earlier from CNO ionization balances. Furthermore, the observed line strengths of heavy metals show large variations between different objects suggesting a possible spread in abundances. We will determine abundances of iron group elements by quantitative spectral analyses with non-LTE model atmospheres.

  16. Challenges to validity in single-group interrupted time series analysis.

    Science.gov (United States)

    Linden, Ariel

    2017-04-01

    Single-group interrupted time series analysis (ITSA) is a popular evaluation methodology in which a single unit of observation is studied; the outcome variable is serially ordered as a time series, and the intervention is expected to "interrupt" the level and/or trend of the time series, subsequent to its introduction. The most common threat to validity is history-the possibility that some other event caused the observed effect in the time series. Although history limits the ability to draw causal inferences from single ITSA models, it can be controlled for by using a comparable control group to serve as the counterfactual. Time series data from 2 natural experiments (effect of Florida's 2000 repeal of its motorcycle helmet law on motorcycle fatalities and California's 1988 Proposition 99 to reduce cigarette sales) are used to illustrate how history biases results of single-group ITSA results-as opposed to when that group's results are contrasted to those of a comparable control group. In the first example, an external event occurring at the same time as the helmet repeal appeared to be the cause of a rise in motorcycle deaths, but was only revealed when Florida was contrasted with comparable control states. Conversely, in the second example, a decreasing trend in cigarette sales prior to the intervention raised question about a treatment effect attributed to Proposition 99, but was reinforced when California was contrasted with comparable control states. Results of single-group ITSA should be considered preliminary, and interpreted with caution, until a more robust study design can be implemented. © 2016 John Wiley & Sons, Ltd.

  17. Parallel group independent component analysis for massive fMRI data sets

    Science.gov (United States)

    Huang, Lei; Qiu, Huitong; Nebel, Mary Beth; Mostofsky, Stewart H.; Pekar, James J.; Lindquist, Martin A.; Eloyan, Ani; Caffo, Brian S.

    2017-01-01

    Independent component analysis (ICA) is widely used in the field of functional neuroimaging to decompose data into spatio-temporal patterns of co-activation. In particular, ICA has found wide usage in the analysis of resting state fMRI (rs-fMRI) data. Recently, a number of large-scale data sets have become publicly available that consist of rs-fMRI scans from thousands of subjects. As a result, efficient ICA algorithms that scale well to the increased number of subjects are required. To address this problem, we propose a two-stage likelihood-based algorithm for performing group ICA, which we denote Parallel Group Independent Component Analysis (PGICA). By utilizing the sequential nature of the algorithm and parallel computing techniques, we are able to efficiently analyze data sets from large numbers of subjects. We illustrate the efficacy of PGICA, which has been implemented in R and is freely available through the Comprehensive R Archive Network, through simulation studies and application to rs-fMRI data from two large multi-subject data sets, consisting of 301 and 779 subjects respectively. PMID:28278208

  18. Parallel group independent component analysis for massive fMRI data sets.

    Science.gov (United States)

    Chen, Shaojie; Huang, Lei; Qiu, Huitong; Nebel, Mary Beth; Mostofsky, Stewart H; Pekar, James J; Lindquist, Martin A; Eloyan, Ani; Caffo, Brian S

    2017-01-01

    Independent component analysis (ICA) is widely used in the field of functional neuroimaging to decompose data into spatio-temporal patterns of co-activation. In particular, ICA has found wide usage in the analysis of resting state fMRI (rs-fMRI) data. Recently, a number of large-scale data sets have become publicly available that consist of rs-fMRI scans from thousands of subjects. As a result, efficient ICA algorithms that scale well to the increased number of subjects are required. To address this problem, we propose a two-stage likelihood-based algorithm for performing group ICA, which we denote Parallel Group Independent Component Analysis (PGICA). By utilizing the sequential nature of the algorithm and parallel computing techniques, we are able to efficiently analyze data sets from large numbers of subjects. We illustrate the efficacy of PGICA, which has been implemented in R and is freely available through the Comprehensive R Archive Network, through simulation studies and application to rs-fMRI data from two large multi-subject data sets, consisting of 301 and 779 subjects respectively.

  19. 3D finite element analysis on pile-soil interaction of passive pile group

    Institute of Scientific and Technical Information of China (English)

    ZHAO Ming-hua; LIU Dun-ping; ZHANG Ling; JIANG Chong

    2008-01-01

    The interaction between pile and soft soil of the passive pile group subjected to soil movement was analyzed with three-dimensional finite element model by using ANSYS software. The soil was assumed to be elastic-plastic complying with the Drucker-Prager yield criterion in the analysis. The large displacement of soil was considered and contact elements were used to evaluate the interaction between pile and soil. The influences of soil depth of layer and number of piles on the lateral pressure of the pile were investigated, and the lateral pressure distributions on the (2×1) pile group and on the (2×2) pile group were compared. The results show that the adjacent surcharge may result in significant lateral movement of the soft soil and cousiderable pressure on the pile. The pressure acting on the row near the surcharge is higher than that on the other row, due to the "barrier" and arching effects in pile groups. The passive load and its distribution should be taken into account in the design of the passive piles.

  20. Genetic analysis of 19 X chromosome STR loci for forensic purposes in four Chinese ethnic groups

    Science.gov (United States)

    Yang, Xingyi; Zhang, Xiaofang; Zhu, Junyong; Chen, Linli; Liu, Changhui; Feng, Xingling; Chen, Ling; Wang, Huijun; Liu, Chao

    2017-01-01

    A new 19 X- short tandem repeat (STR) multiplex PCR system has recently been developed, though its applicability in forensic studies has not been thoroughly assessed. In this study, 932 unrelated individuals from four Chinese ethnic groups (Han, Tibet, Uighur and Hui) were successfully genotyped using this new multiplex PCR system. Our results showed significant linkage disequilibrium between markers DXS10103 and DXS10101 in all four ethnic groups; markers DXS10159 and DXS10162, DXS6809 and DXS6789, and HPRTB and DXS10101 in Tibetan populations; and markers DXS10074 and DXS10075 in Uighur populations. The combined powers of discrimination in males and females were calculated according to haplotype frequencies from allele distributions rather than haplotype counts in the relevant population and were high in four ethnic groups. The cumulative powers of discrimination of the tested X-STR loci were 1.000000000000000 and 0.999999999997940 in females and males, respectively. All 19 X-STR loci are highly polymorphic. The highest Reynolds genetic distances were observed for the Tibet-Uighur pairwise comparisons. This study represents an extensive report on X-STR marker variation in minor Chinese populations and a comprehensive analysis of the diversity of these 19 X STR markers in four Chinese ethnic groups. PMID:28211539

  1. Health adaptation policy for climate vulnerable groups: a 'critical computational linguistics' analysis.

    Science.gov (United States)

    Seidel, Bastian M; Bell, Erica

    2014-11-28

    Many countries are developing or reviewing national adaptation policy for climate change but the extent to which these meet the health needs of vulnerable groups has not been assessed. This study examines the adequacy of such policies for nine known climate-vulnerable groups: people with mental health conditions, Aboriginal people, culturally and linguistically diverse groups, aged people, people with disabilities, rural communities, children, women, and socioeconomically disadvantaged people. The study analyses an exhaustive sample of national adaptation policy documents from Annex 1 ('developed') countries of the United Nations Framework Convention on Climate Change: 20 documents from 12 countries. A 'critical computational linguistics' method was used involving novel software-driven quantitative mapping and traditional critical discourse analysis. The study finds that references to vulnerable groups are relatively little present or non-existent, as well as poorly connected to language about practical strategies and socio-economic contexts, both also little present. The conclusions offer strategies for developing policy that is better informed by a 'social determinants of health' definition of climate vulnerability, consistent with best practice in the literature and global policy prescriptions.

  2. Genetic Polymorphisms Analysis of Pharmacogenomic VIP Variants in Miao Ethnic Group of Southwest China.

    Science.gov (United States)

    Jin, Tianbo; Aikemu, Ainiwaer; Zhang, Mingxi; Geng, Tingting; Feng, Tian; Kang, Longli; Luo, Man Lin

    2015-12-03

    BACKGROUND Genetic polymorphisms have a potential clinical role in determining both inter-individual and inter-ethnic differences in drug efficacy, but we have not found any pharmacogenomics information regarding minorities, such as the Miao ethnic group. Our study aimed to screen numbers of the Miao ethnic group for genotype frequencies of VIP variants and to determine differences between the Miao and other human populations worldwide. MATERIAL AND METHODS In this study, we genotyped 66 Very Important Pharmacogene (VIP) variants selected from PharmGKB in 98 unrelated, healthy Miao individuals from the Guizhou province and compared our data with 12 other populations, including 11 populations from the HapMap data set and Xi'an Han Chinese. RESULTS Using the χ2 test, we found that the allele frequencies of the VDR rs1544410 and VKORC1 (rs9934438) variants in the Miao population are quite different from that in other ethnic groups. Furthermore, we found that genotype frequencies of rs1801133 (MTHFR) in the 13 selected populations are significantly different. Population structure and F-statistics (Fst) analysis show that the genetic background of the Miao is relatively close to that of Chinese in metropolitan Denver, CO, USA (CHD). CONCLUSIONS Our results help complete the information provided by the pharmacogenomics database of the Miao ethnic group and provide a theoretical basis for safer drug administration, which may be useful for diagnosing and treating diseases in this population.

  3. Genetic analysis of 19 X chromosome STR loci for forensic purposes in four Chinese ethnic groups.

    Science.gov (United States)

    Yang, Xingyi; Zhang, Xiaofang; Zhu, Junyong; Chen, Linli; Liu, Changhui; Feng, Xingling; Chen, Ling; Wang, Huijun; Liu, Chao

    2017-02-17

    A new 19 X- short tandem repeat (STR) multiplex PCR system has recently been developed, though its applicability in forensic studies has not been thoroughly assessed. In this study, 932 unrelated individuals from four Chinese ethnic groups (Han, Tibet, Uighur and Hui) were successfully genotyped using this new multiplex PCR system. Our results showed significant linkage disequilibrium between markers DXS10103 and DXS10101 in all four ethnic groups; markers DXS10159 and DXS10162, DXS6809 and DXS6789, and HPRTB and DXS10101 in Tibetan populations; and markers DXS10074 and DXS10075 in Uighur populations. The combined powers of discrimination in males and females were calculated according to haplotype frequencies from allele distributions rather than haplotype counts in the relevant population and were high in four ethnic groups. The cumulative powers of discrimination of the tested X-STR loci were 1.000000000000000 and 0.999999999997940 in females and males, respectively. All 19 X-STR loci are highly polymorphic. The highest Reynolds genetic distances were observed for the Tibet-Uighur pairwise comparisons. This study represents an extensive report on X-STR marker variation in minor Chinese populations and a comprehensive analysis of the diversity of these 19 X STR markers in four Chinese ethnic groups.

  4. Body mass index and percent body fat: a meta analysis among different ethnic groups.

    Science.gov (United States)

    Deurenberg, P; Yap, M; van Staveren, W A

    1998-12-01

    To study the relationship between percent body fat and body mass index (BMI) in different ethnic groups and to evaluate the validity of the BMI cut-off points for obesity. Meta analysis of literature data. Populations of American Blacks, Caucasians, Chinese, Ethiopians, Indonesians, Polynesians and Thais. Mean values of BMI, percent body fat, gender and age were adapted from original papers. The relationship between percent body fat and BMI differs in the ethnic groups studied. For the same level of body fat, age and gender, American Blacks have a 1.3 kg/m2 and Polynesians a 4.5 kg/m2 lower BMI compared to Caucasians. By contrast, in Chinese, Ethiopians, Indonesians and Thais BMIs are 1.9, 4.6, 3.2 and 2.9 kg/m2 lower compared to Caucasians, respectively. Slight differences in the relationship between percent body fat and BMI of American Caucasians and European Caucasians were also found. The differences found in the body fat/BMI relationship in different ethnic groups could be due to differences in energy balance as well as to differences in body build. The results show that the relationship between percent body fat and BMI is different among different ethnic groups. This should have public health implications for the definitions of BMI cut-off points for obesity, which would need to be population-specific.

  5. Connectome-scale group-wise consistent resting-state network analysis in autism spectrum disorder

    Directory of Open Access Journals (Sweden)

    Yu Zhao

    2016-01-01

    Full Text Available Understanding the organizational architecture of human brain function and its alteration patterns in diseased brains such as Autism Spectrum Disorder (ASD patients are of great interests. In-vivo functional magnetic resonance imaging (fMRI offers a unique window to investigate the mechanism of brain function and to identify functional network components of the human brain. Previously, we have shown that multiple concurrent functional networks can be derived from fMRI signals using whole-brain sparse representation. Yet it is still an open question to derive group-wise consistent networks featured in ASD patients and controls. Here we proposed an effective volumetric network descriptor, named connectivity map, to compactly describe spatial patterns of brain network maps and implemented a fast framework in Apache Spark environment that can effectively identify group-wise consistent networks in big fMRI dataset. Our experiment results identified 144 group-wisely common intrinsic connectivity networks (ICNs shared between ASD patients and healthy control subjects, where some ICNs are substantially different between the two groups. Moreover, further analysis on the functional connectivity and spatial overlap between these 144 common ICNs reveals connectomics signatures characterizing ASD patients and controls. In particular, the computing time of our Spark-enabled functional connectomics framework is significantly reduced from 240 hours (C++ code, single core to 20 hours, exhibiting a great potential to handle fMRI big data in the future.

  6. Transitioning from traditional to green cleaners: an analysis of custodian and manager focus groups.

    Science.gov (United States)

    Simcox, Nancy; Wakai, Sara; Welsh, Loyola; Westinghouse, Carol; Morse, Tim

    2012-01-01

    Custodians represent one of the largest occupational groups using cleaning agents, and yet their voices are infrequently heard in relation to the introduction of "green" cleaners and the laws regarding environmentally preferable products (EPP). This study reflects worker voices on use and effectiveness of chemicals, as well as incentives and obstacles for green cleaning programs. Sixty-four custodians and staff participated in 10 focus groups. Data were entered into Atlas Ti and the constant comparative method of qualitative data analysis was used to identify themes. Themes included satisfaction in a "well-done" job, more effort required for job, lack of involvement in EPP selection process, EPP's ease of use for workers with English as a Second Language (ESL), misuse of disinfectants, health complaints, and need for training. This study shows that custodians have a voice, and that improved communication and feedback among all the stakeholders are needed to make the transition to green cleaning more effective.

  7. Considerations related to the Analysis of the Financial Balance of the Trading Company Interlink Group SRL

    Directory of Open Access Journals (Sweden)

    Anton C.

    2009-12-01

    Full Text Available The analysis of the financial balance in the company’s activity implies the amortization of the resources with the needs, reflected as the functional balance sheet. The information transmitted by means of the accounting balance sheet as a synthesis document, is processed and grouped so that the view on the company appears from the functional point of view and the functional presentation of the balance sheet highlights financial, structural aspects that best respond to the requirements of the company managers. According to the functional point of view, the company is the economic entity whose essential objective is the production of goods and services, its activity implying the exertion of the production, trade, investments and financing functions. The paper aims at establishing a financial diagnosis allowing the appreciation of the conditions in which financial balance is made for the continuity of INTERLINK GROUP SRL company’s activity and attaining the proposed intend.

  8. THE DEMOBILIZATION OF TWO ILLEGAL ARMED GROUPS: ANALYSIS OF THE COVERAGE BY NATIONAL PRESS

    Directory of Open Access Journals (Sweden)

    Yeny Serrano

    2012-12-01

    Full Text Available Given the start of new peace talks between the FARC guerrillas and the Colom-bian government, it is crucial to understand the role of Colombian journalists in reporting peace and war.This article presents an analysis on the National Press coverage of the demobilizations of a paramilitary group (Bloque Cacique Nutibara and a section of the FARC guerrillas (BloqueCacicaGaitana within a frame that reflects over the ethical practice of journalism in the context of war. The results are consistent with literature arguing that ethical codes are not documents dictating how journalists should do their job, but rather they repre-sent political acts of communication which allow journalists to reclaim their prof-fessional independence from sources and defend themselves from threats. The paper also discusses the apparent tension between journalism ethics, and the barriers imposed by the media´s informational needs and the strategic military aims of armed groups.

  9. Corrective interpersonal experience in psychodrama group therapy: a comprehensive process analysis of significant therapeutic events.

    Science.gov (United States)

    McVea, Charmaine S; Gow, Kathryn; Lowe, Roger

    2011-07-01

    This study investigated the process of resolving painful emotional experience during psychodrama group therapy, by examining significant therapeutic events within seven psychodrama enactments. A comprehensive process analysis of four resolved and three not-resolved cases identified five meta-processes which were linked to in-session resolution. One was a readiness to engage in the therapeutic process, which was influenced by client characteristics and the client's experience of the group; and four were therapeutic events: (1) re-experiencing with insight; (2) activating resourcefulness; (3) social atom repair with emotional release; and (4) integration. A corrective interpersonal experience (social atom repair) healed the sense of fragmentation and interpersonal disconnection associated with unresolved emotional pain, and emotional release was therapeutically helpful when located within the enactment of this new role relationship. Protagonists who experienced resolution reported important improvements in interpersonal functioning and sense of self which they attributed to this experience.

  10. Teamwork for clinical emergencies: interprofessional focus group analysis and triangulation with simulation.

    Science.gov (United States)

    Bristowe, Katherine; Siassakos, Dimitrios; Hambly, Helen; Angouri, Jo; Yelland, Andrew; Draycott, Timothy J; Fox, Robert

    2012-10-01

    Our purpose was to investigate health care professionals' beliefs about effective teamwork in medical emergencies based on their experiences. We used framework analysis of interprofessional focus groups in four secondary and tertiary maternity units. The participants were randomly selected senior and junior doctors, senior and junior midwives, and health care assistants, in five groups of 5 to 7 participants each. We found that optimal teamwork was perceived to be dependent on good leadership and availability of experienced staff. The participants described a good leader as one who verbally declares being the leader, communicates clear objectives, and allocates critical tasks, including communication with patients or their family, to suitable individual members. We triangulated the results with evidence from simulation to identify convergent findings and issues requiring further research. The findings will inform the development of teaching programs for medical teams who manage emergencies to improve patient safety and experience.

  11. Classification of fracture and non-fracture groups by analysis of coherent X-ray scatter

    Science.gov (United States)

    Dicken, A. J.; Evans, J. P. O.; Rogers, K. D.; Stone, N.; Greenwood, C.; Godber, S. X.; Clement, J. G.; Lyburn, I. D.; Martin, R. M.; Zioupos, P.

    2016-07-01

    Osteoporotic fractures present a significant social and economic burden, which is set to rise commensurately with the aging population. Greater understanding of the physicochemical differences between osteoporotic and normal conditions will facilitate the development of diagnostic technologies with increased performance and treatments with increased efficacy. Using coherent X-ray scattering we have evaluated a population of 108 ex vivo human bone samples comprised of non-fracture and fracture groups. Principal component fed linear discriminant analysis was used to develop a classification model to discern each condition resulting in a sensitivity and specificity of 93% and 91%, respectively. Evaluating the coherent X-ray scatter differences from each condition supports the hypothesis that a causal physicochemical change has occurred in the fracture group. This work is a critical step along the path towards developing an in vivo diagnostic tool for fracture risk prediction.

  12. A rigorous methodology for development and uncertainty analysis of group contribution based property models

    DEFF Research Database (Denmark)

    Frutiger, Jerome; Abildskov, Jens; Sin, Gürkan

    . The GC model uses the Marrero-Gani (MR) method which considers the group contribution in different levels both functional and structural. The methodology helps improve accuracy and reliability of property modeling and provides a rigorous model quality check and assurance. This is expected to further......Property prediction models are a fundamental tool of process modeling and analysis, especially at the early stage of process development. Furthermore, property prediction models are the fundamental tool for Computer-aided molecular design used for the development of new refrigerants. Group...... contribution (GC) based prediction methods use structurally dependent parameters in order to determine the property of pure components. The aim of the GC parameter estimation is to find the best possible set of model parameters that fits the experimental data. In that sense, there is often a lack of attention...

  13. Analysis of expressed sequence tags (ESTs) from avocado seed (Persea americana var. drymifolia) reveals abundant expression of the gene encoding the antimicrobial peptide snakin.

    Science.gov (United States)

    Guzmán-Rodríguez, Jaquelina J; Ibarra-Laclette, Enrique; Herrera-Estrella, Luis; Ochoa-Zarzosa, Alejandra; Suárez-Rodríguez, Luis María; Rodríguez-Zapata, Luis C; Salgado-Garciglia, Rafael; Jimenez-Moraila, Beatriz; López-Meza, Joel E; López-Gómez, Rodolfo

    2013-09-01

    Avocado is one of the most important fruits in the world. Avocado "native mexicano" (Persea americana var. drymifolia) seeds are widely used in the propagation of this plant and are the primary source of rootstocks globally for a variety of avocado cultivars, such as the Hass avocado. Here, we report the isolation of 5005 ESTs from the 5' ends of P. americana var. drymifolia seed cDNA clones representing 1584 possible unigenes. These avocado seed ESTs were compared with the avocado flower EST library, and we detected several genes that are expressed either in both tissues or only in the seed. The snakin gene, which encodes an element of the innate immune response in plants, was one of those most frequently found among the seed ESTs, and this suggests that it is abundantly expressed in the avocado seed. We expressed the snakin gene in a heterologous system, namely the bovine endothelial cell line BVE-E6E7. Conditioned media from transfected BVE-E6E7 cells showed antimicrobial activity against strains of Escherichia coli and Staphylococcus aureus. This is the first study of the function of the snakin gene in plant seed tissue, and our observations suggest that this gene might play a protective role in the avocado seed.

  14. Analysis of genetic diversity of the heat shock protein 70 gene on the basis of abundant sequence polymorphisms in chicken breeds.

    Science.gov (United States)

    Gan, J K; Jiang, L Y; Kong, L N; Zhang, X Q; Luo, Q B

    2015-03-06

    This study was designed to detect the sequence variation of the chicken heat shock protein 70 (HSP70) gene. A total of 102 individuals from 8 native Chinese breeds together with Dwarf White Chicken and Red Junglefowl were used to detect sequence variations. The coding regions of the chicken HSP70 gene from 102 individuals were cloned and sequenced. Thirty-six variations were identified, which included 34 single nucleotide polymorphisms and 2 indel mutations. Fifty-seven haplotypes were observed, of which, 43 were breed-specific and 14 were shared. There were 7 Red Junglefowl-specific haplotypes, while Haidong and Silkie only had 2 specific haplotypes. Eleven and 3 haplotypes were shared between and within species, respectively. The variation in nucleotide diversity (Pi) and average number of nucleotide differences (K) among species were consistent. The total Pi of HSP70 was 0.0016, and the total K was 4.1998. The Pi value of Red Junglefowl was the highest (0.0018) and K was 4.8000, while the Pi of Silkie was the lowest (0.0010) and K was 2.5000. These results demonstrated that variation in chicken HSP70 was abundant between and within species.

  15. Ground-based observations of the beta Cephei CoRoT main target HD 180642: abundance analysis and mode identification

    CERN Document Server

    Briquet, M; Morel, T; Aerts, C; De Cat, P; Mathias, P; Lefever, K; Miglio, A; Poretti, E; Martin-Ruiz, S; Paparo, M; Rainer, M; Carrier, F; Gutiérrez-Soto, J; Valtier, J C; Benko, J M; Bognár, Z; Niemczura, E; Amado, P J; Suárez, J C; Moya, A; Rodriguez-Lopez, C; Garrido, R

    2009-01-01

    The known beta Cephei star HD 180642 was observed by the CoRoT satellite in 2007. From the very high-precision light curve, its pulsation frequency spectrum could be derived for the first time (Degroote and collaborators). In this paper, we obtain additional constraints for forthcoming asteroseismic modeling of the target. Our results are based on both extensive ground-based multicolour photometry and high-resolution spectroscopy. We determine T_eff = 24 500+-1000 K and log g = 3.45+-0.15 dex from spectroscopy. The derived chemical abundances are consistent with those for B stars in the solar neighbourhood, except for a mild nitrogen excess. A metallicity Z = 0.0099+-0.0016 is obtained. Three modes are detected in photometry. The degree l is unambiguously identified for two of them: l = 0 and l = 3 for the frequencies 5.48694 1/d and 0.30818 1/d, respectively. The radial mode is non-linear and highly dominant with an amplitude in the U-filter about 15 times larger than the strongest of the other modes. For th...

  16. Transcriptomic analysis of the mussel Elliptio complanata identifies candidate stress-response genes and an abundance of novel or noncoding transcripts.

    Directory of Open Access Journals (Sweden)

    Robert S Cornman

    Full Text Available Mussels are useful indicator species of environmental stress and degradation, and the global decline in freshwater mussel diversity and abundance is of conservation concern. Elliptio complanata is a common freshwater mussel of eastern North America that can serve both as an indicator and as an experimental model for understanding mussel physiology and genetics. To support genetic components of these research goals, we assembled transcriptome contigs from Illumina paired-end reads. Despite efforts to collapse similar contigs, the final assembly was in excess of 136,000 contigs with an N50 of 982 bp. Even so, comparisons to the CEGMA database of conserved eukaryotic genes indicated that ∼ 20% of genes remain unrepresented. However, numerous candidate stress-response genes were present, and we identified lineage-specific patterns of diversification among molluscs for cytochrome P450 detoxification genes and two saccharide-modifying enzymes: 1,3 beta-galactosyltransferase and fucosyltransferase. Less than a quarter of contigs had protein-level similarity based on modest BLAST and Hmmer3 statistical thresholds. These results add comparative genomic resources for molluscs and suggest a wealth of novel proteins and noncoding transcripts.

  17. [Goal analysis and goal operationalisation: a group intervention for the enhancement of work motivation].

    Science.gov (United States)

    Hanna, Rana; Fiedler, Rolf G; Dietrich, Hilke; Greitemann, Bernhard; Heuft, Gereon

    2010-08-01

    Work motivation, mental well-being and competencies of self-regulation are linked to successful job-related reintegration after rehabilitation. Based on the Diagnostical Instrument to assess Work motivation (Diagnostikinstrument für Arbeitsmotivation DIAMO) and existing training programs, a new group intervention, the goal analysis and goal operationalization, was developed and evaluated. The objective of this intervention, designed for participants of a rehabilitation program was to enhance work motivation and volitional control processes (self-regulation and self-control), to encourage job-related goal orientation and to thereby increase the probability of goal achievement. In a quasi-experimental longitudinal design 207 patients (111 experimental group/96 control group) were tested. The experimental group took part in the job-related training (ZAZO) in addition to the usual rehabilitation. The evaluation was conducted through various scales at t0 (beginning) and t1 (end of the training). Scales for the measurement of work motivation, mental well-being, status of rehabilitation, competencies of self-regulation and the subjective prognosis of the ability to work were used. As direct effects of the training an enhancement of work motivation and of an improved subjective prognosis of the ability to work were expected. Accordingly, a positive influence on the subjective well-being as indirect effects, were anticipated in the long run, the experimental group should also show an enhanced job-related reintegration. Participants of the experimental group showed significantly higher values on particular scales of the Diagnostical Instrument of Work motivation as opposed to the control group (curiosity motive, attitudes to work and contact motive). Most notably, significant interactional effects could be found on the scale for the subjective prognosis of the ability to work, which is a highly reliable instrument and important predictor for prospective job

  18. Using computerized text analysis to assess communication within an Italian type 1 diabetes Facebook group

    Directory of Open Access Journals (Sweden)

    Alda Troncone

    2015-11-01

    Full Text Available The purpose of this study was to assess messages posted by mothers of children with type 1 diabetes in the Italian Facebook group “Mamme e diabete” using computerized text analysis. The data suggest that these mothers use online discussion boards as a place to seek and provide information to better manage the disease’s daily demands—especially those tasks linked to insulin correction and administration, control of food intake, and bureaucratic duties, as well as to seek and give encouragement and to share experiences regarding diabetes and related impact on their life. The implications of these findings for the management of diabetes are discussed.

  19. Lie group analysis method for two classes of fractional partial differential equations

    Science.gov (United States)

    Chen, Cheng; Jiang, Yao-Lin

    2015-09-01

    In this paper we deal with two classes of fractional partial differential equation: n order linear fractional partial differential equation and nonlinear fractional reaction diffusion convection equation, by using the Lie group analysis method. The infinitesimal generators general formula of n order linear fractional partial differential equation is obtained. For nonlinear fractional reaction diffusion convection equation, the properties of their infinitesimal generators are considered. The four special cases are exhaustively investigated respectively. At the same time some examples of the corresponding case are also given. So it is very convenient to solve the infinitesimal generator of some fractional partial differential equation.

  20. Using computerized text analysis to assess communication within an Italian type 1 diabetes Facebook group.

    Science.gov (United States)

    Troncone, Alda; Cascella, Crescenzo; Chianese, Antonietta; Iafusco, Dario

    2015-07-01

    The purpose of this study was to assess messages posted by mothers of children with type 1 diabetes in the Italian Facebook group "Mamme e diabete" using computerized text analysis. The data suggest that these mothers use online discussion boards as a place to seek and provide information to better manage the disease's daily demands-especially those tasks linked to insulin correction and administration, control of food intake, and bureaucratic duties, as well as to seek and give encouragement and to share experiences regarding diabetes and related impact on their life. The implications of these findings for the management of diabetes are discussed.