WorldWideScience

Sample records for greater log fold

  1. Geophysical borehole logging in selected areas in the Greater Accra plains and the Densu river basin

    International Nuclear Information System (INIS)

    Amartey, E. A.

    2009-06-01

    Geophysical borehole logging was complemented by Vertical Electrical Sounding (VES) method to study fractured bedrock aquifer systems on the compounds of Ghana Atomic Energy Commission (GAEC), Water Research Institute (WRI) in the Accra Plains and the Hydrometric Station of the Department of Geology, University of Ghana at Buokrom in the Densu River Basin. Single-point resistance, resistivity and natural gamma logging in a total of nine boreholes were conducted to identify and characterize the various aquifers in the study areas. Results obtained from the single-point resistance and resistivity logs showed clearly the characteristics of water-bearing fracture zones in the various rock formations. The gamma logs obtained for each area were correlated to form hydrostratigraphic units to establish potential zones of high water-bearing fractures. VES modeled curves shows hydrogeological units of the geological formation which compares well with features obtained on the logs. The investigation identified fractured zone thicknesses of <1 m to 2 m at GAEC area, <1 m to 9 m at WRI area and <1 m to 10 m thicknesses at the Buokrom area. The fractured bedrock aquifers identified have been characterized based on their thicknesses as follows. Five minor (thickness < 5 m), two medium (thickness 5 m to 14 m) and three major (thickness ⩾15 m) fractures were identified at the GAEC area. At the WRI area three minor and five medium fractures were identified. Also four minor and five medium fractures were identified for the Buokrom area boreholes. (au)

  2. Logged peat swamp forest supports greater macrofungal biodiversity than large-scale oil palm plantations and smallholdings.

    Science.gov (United States)

    Shuhada, Siti Noor; Salim, Sabiha; Nobilly, Frisco; Zubaid, Akbar; Azhar, Badrul

    2017-09-01

    Intensive land expansion of commercial oil palm agricultural lands results in reducing the size of peat swamp forests, particularly in Southeast Asia. The effect of this land conversion on macrofungal biodiversity is, however, understudied. We quantified macrofungal biodiversity by identifying mushroom sporocarps throughout four different habitats; logged peat swamp forest, large-scale oil palm plantation, monoculture, and polyculture smallholdings. We recorded a total of 757 clusters of macrofungi belonging to 127 morphospecies and found that substrates for growing macrofungi were abundant in peat swamp forest; hence, morphospecies richness and macrofungal clusters were significantly greater in logged peat swamp forest than converted oil palm agriculture lands. Environmental factors that influence macrofungi in logged peat swamp forests such as air temperature, humidity, wind speed, soil pH, and soil moisture were different from those in oil palm plantations and smallholdings. We conclude that peat swamp forests are irreplaceable with respect to macrofungal biodiversity. They host much greater macrofungal biodiversity than any of the oil palm agricultural lands. It is imperative that further expansion of oil palm plantation into remaining peat swamp forests should be prohibited in palm oil producing countries. These results imply that macrofungal distribution reflects changes in microclimate between habitats and reduced macrofungal biodiversity may adversely affect decomposition in human-modified landscapes.

  3. Structural development and stress evolution of an arcuate fold-and-thrust system, southwestern Greater Caucasus, Republic of Georgia

    Science.gov (United States)

    Tibaldi, A.; Bonali, F. L.; Russo, E.; Pasquarè Mariotto, F. A.

    2018-05-01

    The southern front of the Greater Caucasus is quite rectilinear in plan view, with the exception of part of the Rioni Basin, where marine and continental deposits of Cretaceous-Neogene age were locally folded and uplifted; this resulted in the formation of an arcuate fold-and-thrust system that extends 45 km into the foreland. Although previous studies suggested that this system has developed only since Miocene times, our new detailed and systematic field measurements of brittle and ductile structures show a very complex history, consisting in four main phases of brittle deformation and folding, dated from Eocene to Quaternary times. We collected microtectonic data at 248 faults, and calculated the related paleostress tensors. The first two phases which we document here, predated folding and were characterised by dominant transcurrent faulting and subordinate reverse motions; the greatest principal stress σ1 was perpendicular and later parallel to the mountain belt. Afterwards, NW-SE, E-W and NE-SW trending, south-vergent asymmetrical folds started to form. In the western sector of the study area, folds are sinuous in plan view, whereas to the east they show a left-stepping, en-échelon geometry. Another two, brittle deformation phases took place after the folding, due to the activity of a set of right-lateral, strike-slip faults that strike NW-SE and NE-SW, respectively, as well as by left-lateral strike-slip faults, mostly striking NW-SE, NE-SW and NNE-SSW. These two additional phases were produced by a NE-SW to N-S trending σ1. The arcuate belt is marked by along-strike variations in the tectonic regime and deformation geometry, plus belt-parallel stretching. Based on our field data, integrated with published analogue models, we suggest a possible explanation for the Rioni structure, in terms of the oblique, asymmetric indentation of an upper crustal blocks moving to the SSW.

  4. A cervid vocal fold model suggests greater glottal efficiency in calling at high frequencies.

    Directory of Open Access Journals (Sweden)

    Ingo R Titze

    2010-08-01

    Full Text Available Male Rocky Mountain elk (Cervus elaphus nelsoni produce loud and high fundamental frequency bugles during the mating season, in contrast to the male European Red Deer (Cervus elaphus scoticus who produces loud and low fundamental frequency roaring calls. A critical step in understanding vocal communication is to relate sound complexity to anatomy and physiology in a causal manner. Experimentation at the sound source, often difficult in vivo in mammals, is simulated here by a finite element model of the larynx and a wave propagation model of the vocal tract, both based on the morphology and biomechanics of the elk. The model can produce a wide range of fundamental frequencies. Low fundamental frequencies require low vocal fold strain, but large lung pressure and large glottal flow if sound intensity level is to exceed 70 dB at 10 m distance. A high-frequency bugle requires both large muscular effort (to strain the vocal ligament and high lung pressure (to overcome phonation threshold pressure, but at least 10 dB more intensity level can be achieved. Glottal efficiency, the ration of radiated sound power to aerodynamic power at the glottis, is higher in elk, suggesting an advantage of high-pitched signaling. This advantage is based on two aspects; first, the lower airflow required for aerodynamic power and, second, an acoustic radiation advantage at higher frequencies. Both signal types are used by the respective males during the mating season and probably serve as honest signals. The two signal types relate differently to physical qualities of the sender. The low-frequency sound (Red Deer call relates to overall body size via a strong relationship between acoustic parameters and the size of vocal organs and body size. The high-frequency bugle may signal muscular strength and endurance, via a 'vocalizing at the edge' mechanism, for which efficiency is critical.

  5. Complex fold and thrust belt structural styles: Examples from the Greater Juha area of the Papuan Fold and Thrust Belt, Papua New Guinea

    Science.gov (United States)

    Mahoney, Luke; Hill, Kevin; McLaren, Sandra; Hanani, Amanda

    2017-07-01

    The remote and inhospitable Papuan Fold Belt in Papua New Guinea is one of the youngest yet least well-documented fold and thrust belts on Earth. Within the frontal Greater Juha area we have carried out >100 km of geological traverses and associated analyses that have added significantly to the contemporary geological and geophysical dataset. Our structural analysis provides evidence of major inversion, detachment and triangle zone faults within the uplifted Eastern Muller Ranges. We have used the dataset to develop a quasi-3D model for the Greater Juha area, with associated cross-sections revealing that the exposed Cenozoic Darai Limestone is well-constrained with very low shortening of 12.6-21.4% yet structures are elevated up to 7 km above regional. We suggest the inversion of pre-existing rift architecture is the primary influence on the evolution of the area and that structures link to the surface via triangle zones and detachment faults within the incompetent Mesozoic passive-margin sedimentary sequence underlying competent Darai Limestone. Arc-normal oriented structures, dominantly oblique dextral, up-to-the-southeast, are pervasive across a range of scales and are here interpreted to relate at depth to weakened pre-existing basement cross-structures. It is proposed that Palaeozoic basement fabric controlled the structural framework of the basin during Early Mesozoic rifting forming regional-scale accommodation zones and related local-scale transfer structures that are now expressed as regional-scale arc-normal lineaments and local-scale arc-normal structures, respectively. Transfer structures, including complexly breached relay ramps, utilise northeast-southwest striking weaknesses associated with the basement fabric, as a mechanism for accommodating displacement along major northwest-southeast striking normal faults. These structures have subsequently been inverted to form arc-normal oriented zones of tear faulting that accommodate laterally variable

  6. The Results of Complex Selective Logging in Beech-Hornbeam Tree Stands of the Greater Caucasus in Azerbaijan

    Directory of Open Access Journals (Sweden)

    A. B. Yakhyaev

    2014-06-01

    Full Text Available The results of complex selective logging conducted in beech-hornbeam tree stands on the northeastern slope of the Greater Caucasus are analyzed in the paper. Experiments were carried out in two forestry districts, involving beech stands, comprising 2–3 units, with 30° slopes, in beech forests with woodruff, fescue and forb forest types. It has been revealed that for recovering the main tree species, as well as for increasing productivity and sustainability of the beech-hornbeam tree stands, which was spread out in the northern exposures, 2–3 repetitions of complex selective logging are recommended. It is recommended that in order to increase the amount of beech in the tree stand composition to 6–8 units in young stands and to 4–6 units at the slopes of south exposures, to complete 3–4 thinning operations, with the increasing beech share to 4–5 units in the upper story and in the undergrowth.

  7. A simple, practical and complete O(n3/log n)-time algorithm for RNA folding using the Four-Russians speedup.

    Science.gov (United States)

    Frid, Yelena; Gusfield, Dan

    2010-01-04

    The problem of computationally predicting the secondary structure (or folding) of RNA molecules was first introduced more than thirty years ago and yet continues to be an area of active research and development. The basic RNA-folding problem of finding a maximum cardinality, non-crossing, matching of complimentary nucleotides in an RNA sequence of length n, has an O(n3)-time dynamic programming solution that is widely applied. It is known that an o(n3) worst-case time solution is possible, but the published and suggested methods are complex and have not been established to be practical. Significant practical improvements to the original dynamic programming method have been introduced, but they retain the O(n3) worst-case time bound when n is the only problem-parameter used in the bound. Surprisingly, the most widely-used, general technique to achieve a worst-case (and often practical) speed up of dynamic programming, the Four-Russians technique, has not been previously applied to the RNA-folding problem. This is perhaps due to technical issues in adapting the technique to RNA-folding. In this paper, we give a simple, complete, and practical Four-Russians algorithm for the basic RNA-folding problem, achieving a worst-case time-bound of O(n3/log(n)). We show that this time-bound can also be obtained for richer nucleotide matching scoring-schemes, and that the method achieves consistent speed-ups in practice. The contribution is both theoretical and practical, since the basic RNA-folding problem is often solved multiple times in the inner-loop of more complex algorithms, and for long RNA molecules in the study of RNA virus genomes.

  8. 3D Reservoir Modeling of Semutang Gas Field: A lonely Gas field in Chittagong-Tripura Fold Belt, with Integrated Well Log, 2D Seismic Reflectivity and Attributes.

    Science.gov (United States)

    Salehin, Z.; Woobaidullah, A. S. M.; Snigdha, S. S.

    2015-12-01

    Bengal Basin with its prolific gas rich province provides needed energy to Bangladesh. Present energy situation demands more Hydrocarbon explorations. Only 'Semutang' is discovered in the high amplitude structures, where rest of are in the gentle to moderate structures of western part of Chittagong-Tripura Fold Belt. But it has some major thrust faults which have strongly breached the reservoir zone. The major objectives of this research are interpretation of gas horizons and faults, then to perform velocity model, structural and property modeling to obtain reservoir properties. It is needed to properly identify the faults and reservoir heterogeneities. 3D modeling is widely used to reveal the subsurface structure in faulted zone where planning and development drilling is major challenge. Thirteen 2D seismic and six well logs have been used to identify six gas bearing horizons and a network of faults and to map the structure at reservoir level. Variance attributes were used to identify faults. Velocity model is performed for domain conversion. Synthetics were prepared from two wells where sonic and density logs are available. Well to seismic tie at reservoir zone shows good match with Direct Hydrocarbon Indicator on seismic section. Vsh, porosity, water saturation and permeability have been calculated and various cross plots among porosity logs have been shown. Structural modeling is used to make zone and layering accordance with minimum sand thickness. Fault model shows the possible fault network, those liable for several dry wells. Facies model have been constrained with Sequential Indicator Simulation method to show the facies distribution along the depth surfaces. Petrophysical models have been prepared with Sequential Gaussian Simulation to estimate petrophysical parameters away from the existing wells to other parts of the field and to observe heterogeneities in reservoir. Average porosity map for each gas zone were constructed. The outcomes of the research

  9. Faults in Paleozoic basement and their participation in Alpine deformation of Greater Caucasus – evidences from materials of restored (balanced) sections in folded sedimentary cover

    Science.gov (United States)

    Yakovlev, Fedor

    2015-04-01

    Method. As each fold has information about strain, numerous folds (0.1-1 km width) inside of hinterland (stripe about 1000 x 50 km) of Greater Caucasus (GC) allow to restore structure for whole sedimentary cover. Material of 24 detailed sections of 510 km total actual length in three regions was used for restoration of structure. These sections were split on 505 domains as associations of 2-5 folds. Three parameters of morphology were measured in these domains: dip of axial plain, dip of envelope plain, value of shortening as interlimb angle [1, 2, 3]. Because these parameters correlate with ellipsoid (ellipse) of strain for domain, sequence of three kinematic operations allow to restore actual state of domain to pre-folded state (from ellipse to circle): rotation to horizontal position of envelope plain, horizontal simple shear to vertical axial plain and vertical flattening (pure shear). Aggregation of chain of pre-folded domains is forming a pre-folded state of whole section, and it allows to calculate of shortening value. For correct detailing of strain study, 78 "structural cells" were formed by aggregation of 5-10 domains in each cell. Some additional observations and calculations allow to find initial and post-folded thickness of sedimentary cover, depth of cover bottom, virtual position of cover top (amplitude of erosion) for all tectonic cells. The received result for 78 cells allowed to understand the main features of GC structure, to see a distribution of basement top depth, to give behavior pattern of the basement and to find a role of faults in shortening of the basement and of sedimentary cover. Results. Three regions of GC were studied: North-Western Caucasus (NWC) [1], Chiaur tectonic zone in South Ossetia (ChZ) and two zones in South-Eastern Caucasus - Tfan Zone (TZ) and Shakhdag zone (ShZ) [3]. The shortening values for structural cells were found as 49% in average for ShZ (with deviations 37÷62%), 55% for TZ (36÷67%), 57% for ChZ (46÷67%) and

  10. Indicator Amino Acid-Derived Estimate of Dietary Protein Requirement for Male Bodybuilders on a Nontraining Day Is Several-Fold Greater than the Current Recommended Dietary Allowance.

    Science.gov (United States)

    Bandegan, Arash; Courtney-Martin, Glenda; Rafii, Mahroukh; Pencharz, Paul B; Lemon, Peter Wr

    2017-05-01

    Background: Despite a number of studies indicating increased dietary protein needs in bodybuilders with the use of the nitrogen balance technique, the Institute of Medicine (2005) has concluded, based in part on methodologic concerns, that "no additional dietary protein is suggested for healthy adults undertaking resistance or endurance exercise." Objective: The aim of the study was to assess the dietary protein requirement of healthy young male bodybuilders ( with ≥3 y training experience) on a nontraining day by measuring the oxidation of ingested l-[1- 13 C]phenylalanine to 13 CO 2 in response to graded intakes of protein [indicator amino acid oxidation (IAAO) technique]. Methods: Eight men (means ± SDs: age, 22.5 ± 1.7 y; weight, 83.9 ± 11.6 kg; 13.0% ± 6.3% body fat) were studied at rest on a nontraining day, on several occasions (4-8 times) each with protein intakes ranging from 0.1 to 3.5 g · kg -1 · d -1 , for a total of 42 experiments. The diets provided energy at 1.5 times each individual's measured resting energy expenditure and were isoenergetic across all treatments. Protein was fed as an amino acid mixture based on the protein pattern in egg, except for phenylalanine and tyrosine, which were maintained at constant amounts across all protein intakes. For 2 d before the study, all participants consumed 1.5 g protein · kg -1 · d -1 On the study day, the protein requirement was determined by identifying the breakpoint in the F 13 CO 2 with graded amounts of dietary protein [mixed-effects change-point regression analysis of F 13 CO 2 (labeled tracer oxidation in breath)]. Results: The Estimated Average Requirement (EAR) of protein and the upper 95% CI RDA for these young male bodybuilders were 1.7 and 2.2 g · kg -1 · d -1 , respectively. Conclusion: These IAAO data suggest that the protein EAR and recommended intake for male bodybuilders at rest on a nontraining day exceed the current recommendations of the Institute of Medicine by ∼2.6-fold

  11. Predictive performance of three practical approaches for grapefruit juice-induced 2-fold or greater increases in AUC of concomitantly administered drugs.

    Science.gov (United States)

    Takahashi, M; Onozawa, S; Ogawa, R; Uesawa, Y; Echizen, H

    2015-02-01

    Clinical pharmacists have a challenging task when answering patients' question about whether they can take specific drugs with grapefruit juice (GFJ) without risk of drug interaction. To identify the most practicable method for predicting clinically relevant changes in plasma concentrations of orally administered drugs caused by the ingestion of GFJ, we compared the predictive performance of three methods using data obtained from the literature. We undertook a systematic search of drug interactions associated with GFJ using MEDLINE and the Metabolism & Transport Drug Interaction Database (DIDB version 4.0). We considered an elevation of the area under the plasma concentration-time curve (AUC) of 2 or greater relative to the control value [AUC ratio (AUCR) ≥ 2.0] as a clinically significant interaction. The data from 74 drugs (194 data sets) were analysed. When the reported information of CYP3A involvement in the metabolism of a drug of interest was adopted as a predictive criterion for GFJ-drug interaction, the performance assessed by positive predictive value (PPV) was low (0.26), but that assessed by negative predictive value (NPV) and sensitivity was high (1.00 for both). When the reported oral bioavailability of ≤ 0.1 was used as a criterion, the PPV improved to 0.50 with an acceptable NPV of 0.81, but sensitivity was reduced to 0.21. When the reported AUCR was ≥ 10 after co-administration of a typical CYP3A inhibitor, the corresponding values were 0.64, 0.79 and 0.19, respectively. We consider that an oral bioavailability of ≤ 0.1 or an AUCR of ≥ 10 caused by a CYP3A inhibitor of a drug of interest may be a practical prediction criterion for avoiding significant interactions with GFJ. Information about the involvement of CYP3A in their metabolism should also be taken into account for drugs with narrow therapeutic ranges. © 2014 John Wiley & Sons Ltd.

  12. Borehole logging

    International Nuclear Information System (INIS)

    Olsen, H.

    1995-01-01

    Numerous ground water investigations have been accomplished by means of borehole logging. Borehole logging can be applied to establish new water recovery wells, to control the existing water producing wells and source areas and to estimate ground water quality. (EG)

  13. Encyclopedia of well logging

    International Nuclear Information System (INIS)

    Desbrandes, R.

    1985-01-01

    The 16 chapters of this book aim to provide students, trainees and engineers with a manual covering all well-logging measurements ranging from drilling to productions, from oil to minerals going by way of geothermal energy. Each chapter is a summary but a bibliography is given at the end of each chapter. Well-logging during drilling, wireline logging equipment and techniques, petroleum logging, data processing of borehole data, interpretation of well-logging, sampling tools, completion and production logging, logging in relief wells to kill off uncontrolled blowouts, techniques for high temperature geothermal energy, small-scale mining and hydrology, logging with oil-base mud and finally recommended logging programs are all topics covered. There is one chapter on nuclear well-logging which is indexed separately. (UK)

  14. Vocal Fold Paralysis

    Science.gov (United States)

    ... here Home » Health Info » Voice, Speech, and Language Vocal Fold Paralysis On this page: What is vocal fold ... Where can I get additional information? What is vocal fold paralysis? Structures involved in speech and voice production ...

  15. http Log Analysis

    DEFF Research Database (Denmark)

    Bøving, Kristian Billeskov; Simonsen, Jesper

    2004-01-01

    This article documents how log analysis can inform qualitative studies concerning the usage of web-based information systems (WIS). No prior research has used http log files as data to study collaboration between multiple users in organisational settings. We investigate how to perform http log...... analysis; what http log analysis says about the nature of collaborative WIS use; and how results from http log analysis may support other data collection methods such as surveys, interviews, and observation. The analysis of log files initially lends itself to research designs, which serve to test...... hypotheses using a quantitative methodology. We show that http log analysis can also be valuable in qualitative research such as case studies. The results from http log analysis can be triangulated with other data sources and for example serve as a means of supporting the interpretation of interview data...

  16. Flips for 3-folds and 4-folds

    CERN Document Server

    Corti, Alessio

    2007-01-01

    This edited collection of chapters, authored by leading experts, provides a complete and essentially self-contained construction of 3-fold and 4-fold klt flips. A large part of the text is a digest of Shokurov's work in the field and a concise, complete and pedagogical proof of the existence of 3-fold flips is presented. The text includes a ten page glossary and is accessible to students and researchers in algebraic geometry.

  17. Log N-log S in inconclusive

    Science.gov (United States)

    Klebesadel, R. W.; Fenimore, E. E.; Laros, J.

    1983-01-01

    The log N-log S data acquired by the Pioneer Venus Orbiter Gamma Burst Detector (PVO) are presented and compared to similar data from the Soviet KONUS experiment. Although the PVO data are consistent with and suggestive of a -3/2 power law distribution, the results are not adequate at this state of observations to differentiate between a -3/2 and a -1 power law slope.

  18. The Meaning of Logs

    NARCIS (Netherlands)

    Etalle, Sandro; Massacci, Fabio; Yautsiukhin, Artsiom

    2007-01-01

    While logging events is becoming increasingly common in computing, in communication and in collaborative work, log systems need to satisfy increasingly challenging (if not conflicting) requirements.Despite the growing pervasiveness of log systems, to date there is no high-level framework which

  19. The Meaning of Logs

    NARCIS (Netherlands)

    Etalle, Sandro; Massacci, Fabio; Yautsiukhin, Artsiom; Lambrinoudakis, Costas; Pernul, Günther; Tjoa, A Min

    While logging events is becoming increasingly common in computing, in communication and in collaborative environments, log systems need to satisfy increasingly challenging (if not conflicting) requirements. In this paper we propose a high-level framework for modeling log systems, and reasoning about

  20. LogScope

    Science.gov (United States)

    Havelund, Klaus; Smith, Margaret H.; Barringer, Howard; Groce, Alex

    2012-01-01

    LogScope is a software package for analyzing log files. The intended use is for offline post-processing of such logs, after the execution of the system under test. LogScope can, however, in principle, also be used to monitor systems online during their execution. Logs are checked against requirements formulated as monitors expressed in a rule-based specification language. This language has similarities to a state machine language, but is more expressive, for example, in its handling of data parameters. The specification language is user friendly, simple, and yet expressive enough for many practical scenarios. The LogScope software was initially developed to specifically assist in testing JPL s Mars Science Laboratory (MSL) flight software, but it is very generic in nature and can be applied to any application that produces some form of logging information (which almost any software does).

  1. Covering folded shapes

    Directory of Open Access Journals (Sweden)

    Oswin Aichholzer

    2014-05-01

    Full Text Available Can folding a piece of paper flat make it larger? We explore whether a shape S must be scaled to cover a flat-folded copy of itself. We consider both single folds and arbitrary folds (continuous piecewise isometries \\(S\\to\\mathbb{R}^2\\. The underlying problem is motivated by computational origami, and is related to other covering and fixturing problems, such as Lebesgue's universal cover problem and force closure grasps. In addition to considering special shapes (squares, equilateral triangles, polygons and disks, we give upper and lower bounds on scale factors for single folds of convex objects and arbitrary folds of simply connected objects.

  2. Radiometric well logging instruments

    International Nuclear Information System (INIS)

    Davydov, A.V.

    1975-01-01

    The technical properties of well instruments for radioactive logging used in the radiometric logging complexes PKS-1000-1 (''Sond-1'') and PRKS-2 (''Vitok-2'') are described. The main features of the electric circuit of the measuring channels are given

  3. Power to the logs!

    CERN Multimedia

    CERN. Geneva; MACMAHON, Joseph

    2015-01-01

    Are you tired of using grep, vi and emacs to read your logs? Do you feel like you’re missing the big picture? Does the word "statistics" put a smile on your face? Then it’s time to give power to the logs!

  4. Digital mineral logging system

    International Nuclear Information System (INIS)

    West, J.B.

    1980-01-01

    A digital mineral logging system acquires data from a mineral logging tool passing through a borehole and transmits the data uphole to an electronic digital signal processor. A predetermined combination of sensors, including a deviometer, is located in a logging tool for the acquisition of the desired data as the logging tool is raised from the borehole. Sensor data in analog format is converted in the logging tool to a digital format and periodically batch transmitted to the surface at a predetermined sampling rate. An identification code is provided for each mineral logging tool, and the code is transmitted to the surface along with the sensor data. The self-identifying tool code is transmitted to the digital signal processor to identify the code against a stored list of the range of numbers assigned to that type of tool. The data is transmitted up the d-c power lines of the tool by a frequency shift key transmission technique. At the surface, a frequency shift key demodulation unit transmits the decoupled data to an asynchronous receiver interfaced to the electronic digital signal processor. During a recording phase, the signals from the logging tool are read by the electronic digital signal processor and stored for later processing. During a calculating phase, the stored data is processed by the digital signal processor and the results are outputted to a printer or plotter, or both

  5. Mariners Weather Log

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — The Mariners Weather Log (MWL) is a publication containing articles, news and information about marine weather events and phenomena, worldwide environmental impact...

  6. Log-inject-log in sand consolidation

    International Nuclear Information System (INIS)

    Murphy, R.P.; Spurlock, J.W.

    1977-01-01

    A method is described for gathering information for the determination of the adequacy of placement of sand consolidating plastic for sand control in oil and gas wells. The method uses a high neutron cross-section tracer which becomes part of the plastic and uses pulsed neutron logging before and after injection of the plastic. Preferably, the method uses lithium, boron, indium, and/or cadmium tracers. Boron oxide is especially useful and can be dissolved in alcohol and mixed with the plastic ingredients

  7. Elephant logging and environment

    International Nuclear Information System (INIS)

    Tin-Aung-Hla

    1995-01-01

    The natural environment comprises non-biological elements such as air, water, light, heat and biological elements of animal and plant life; all interact with each other to create an ecosystem. Human activities like over-exploitation of forest results in deforestation and desertification. This consequently changes ecological balance. Topics on: (1) history of elephants utilization; (2) elephant logging; (3) classification of elephants; (4) dragging gear; (5) elephant power; (6) elephant logging and environment, are discussed

  8. Log4J

    CERN Document Server

    Perry, Steven

    2009-01-01

    Log4j has been around for a while now, and it seems like so many applications use it. I've used it in my applications for years now, and I'll bet you have too. But every time I need to do something with log4j I've never done before I find myself searching for examples of how to do whatever that is, and I don't usually have much luck. I believe the reason for this is that there is a not a great deal of useful information about log4j, either in print or on the Internet. The information is too simple to be of real-world use, too complicated to be distilled quickly (which is what most developers

  9. Mechanics of log calibration

    International Nuclear Information System (INIS)

    Waller, W.C.; Cram, M.E.; Hall, J.E.

    1975-01-01

    For any measurement to have meaning, it must be related to generally accepted standard units by a valid and specified system of comparison. To calibrate well-logging tools, sensing systems are designed which produce consistent and repeatable indications over the range for which the tool was intended. The basics of calibration theory, procedures, and calibration record presentations are reviewed. Calibrations for induction, electrical, radioactivity, and sonic logging tools will be discussed. The authors' intent is to provide an understanding of the sources of errors, of the way errors are minimized in the calibration process, and of the significance of changes in recorded calibration data

  10. Logging Concessions Enable Illegal Logging Crisis in the Peruvian Amazon

    OpenAIRE

    Finer, Matt; Jenkins, Clinton N.; Sky, Melissa A. Blue; Pine, Justin

    2014-01-01

    The Peruvian Amazon is an important arena in global efforts to promote sustainable logging in the tropics. Despite recent efforts to achieve sustainability, such as provisions in the US?Peru Trade Promotion Agreement, illegal logging continues to plague the region. We present evidence that Peru's legal logging concession system is enabling the widespread illegal logging via the regulatory documents designed to ensure sustainable logging. Analyzing official government data, we found that 68.3%...

  11. Log of Apollo 11.

    Science.gov (United States)

    National Aeronautics and Space Administration, Washington, DC.

    The major events of the first manned moon landing mission, Apollo 11, are presented in chronological order from launch time until arrival of the astronauts aboard the U.S.S. Hornet. The log is descriptive, non-technical, and includes numerous color photographs of the astronauts on the moon. (PR)

  12. Borehole logging system

    International Nuclear Information System (INIS)

    Allen, L.S.

    1988-01-01

    A radioactive borehole logging tool employs an epithermal neutron detector having a neutron counter surrounded by an inner thermal neutron filter and an outer thermal neutron filter. Located between the inner and outer filters is a neutron moderating material for extending the lifetime of epithermal neutrons to enhance the counting rate of such epithermal neutrons by the neutron counter

  13. Neutron--neutron logging

    International Nuclear Information System (INIS)

    Allen, L.S.

    1977-01-01

    A borehole logging tool includes a steady-state source of fast neutrons, two epithermal neutron detectors, and two thermal neutron detectors. A count rate meter is connected to each neutron detector. A first ratio detector provides an indication of the porosity of the formation surrounding the borehole by determining the ratio of the outputs of the two count rate meters connected to the two epithermal neutron detectors. A second ratio detector provides an indication of both porosity and macroscopic absorption cross section of the formation surrounding the borehole by determining the ratio of the outputs of the two count rate meters connected to the two thermal neutron detectors. By comparing the signals of the two ratio detectors, oil bearing zones and salt water bearing zones within the formation being logged can be distinguished and the amount of oil saturation can be determined. 6 claims, 2 figures

  14. Pulsed radiation decay logging

    International Nuclear Information System (INIS)

    Mills, W.R. Jr.

    1983-01-01

    There are provided new and improved well logging processes and systems wherein the detection of secondary radiation is accomplished during a plurality of time windows in a manner to accurately characterize the decay rate of the secondary radiation. The system comprises a well logging tool having a primary pulsed radiation source which emits repetitive time-spaced bursts of primary radiation and detector means for detecting secondary radiation resulting from the primary radiation and producing output signals in response to the detected radiation. A plurality of measuring channels are provided, each of which produces a count rate function representative of signals received from the detector means during successive time windows occurring between the primary radiation bursts. The logging system further comprises means responsive to the measuring channels for producing a plurality of functions representative of the ratios of the radiation count rates measured during adjacent pairs of the time windows. Comparator means function to compare the ratio functions and select at least one of the ratio functions to generate a signal representative of the decay rate of the secondary radiation

  15. Geophysical borehole logging

    International Nuclear Information System (INIS)

    McCann, D.; Barton, K.J.; Hearn, K.

    1981-08-01

    Most of the available literature on geophysical borehole logging refers to studies carried out in sedimentary rocks. It is only in recent years that any great interest has been shown in geophysical logging in boreholes in metamorphic and igneous rocks following the development of research programmes associated with geothermal energy and nuclear waste disposal. This report is concerned with the programme of geophysical logging carried out on the three deep boreholes at Altnabreac, Caithness, to examine the effectiveness of these methods in crystalline rock. Of particular importance is the assessment of the performance of the various geophysical sondes run in the boreholes in relation to the rock mass properties. The geophysical data can be used to provide additional in-situ information on the geological, hydrogeological and engineering properties of the rock mass. Fracturing and weathering in the rock mass have a considerable effect on both the design parameters for an engineering structure and the flow of water through the rock mass; hence, the relation between the geophysical properties and the degree of fracturing and weathering is examined in some detail. (author)

  16. Vocal Fold Collision Modeling

    DEFF Research Database (Denmark)

    Granados, Alba; Brunskog, Jonas; Misztal, M. K.

    2015-01-01

    When vocal folds vibrate at normal speaking frequencies, collisions occurs. The numerics and formulations behind a position-based continuum model of contact is an active field of research in the contact mechanics community. In this paper, a frictionless three-dimensional finite element model...

  17. Folding worlds between pages

    CERN Multimedia

    Meier, Matthias

    2010-01-01

    "We all remember pop-up books form our childhood. As fascinated as we were back then, we probably never imagined how much engineering know-how went into these books. Pop-up engineer Anton Radevsky has even managed to fold a 27-kilometre particle accelerator into a book" (4 pages)

  18. Folds and Etudes

    Science.gov (United States)

    Bean, Robert

    2007-01-01

    In this article, the author talks about "Folds" and "Etudes" which are images derived from anonymous typing exercises that he found in a used copy of "Touch Typing Made Simple". "Etudes" refers to the musical tradition of studies for a solo instrument, which is a typewriter. Typing exercises are repetitive attempts to type words and phrases…

  19. Pulse neutron logging technique

    International Nuclear Information System (INIS)

    Bespalov, D.F.; Dylyuk, A.A.

    1975-01-01

    A new method of neutron-burst logging is proposed, residing in irradiating rocks with fast neutron bursts and registering the integrated flux burst of thermal and/or epithermal neutrons, from the moment of its initiation to that of full absorption. The obtaained value is representative of the rock properties (porosity, hydrogen content). The integrated flux in a burst of thermal and epithermal neutrons can be measured both by way of activation of a reference sample of a known chemical composition during the neutron burst and by recording the radiation of induced activity of the sample within an interval between two bursts. The proposed method features high informative value, accuracy and efficiency

  20. Physics of protein folding

    Science.gov (United States)

    Finkelstein, A. V.; Galzitskaya, O. V.

    2004-04-01

    Protein physics is grounded on three fundamental experimental facts: protein, this long heteropolymer, has a well defined compact three-dimensional structure; this structure can spontaneously arise from the unfolded protein chain in appropriate environment; and this structure is separated from the unfolded state of the chain by the “all-or-none” phase transition, which ensures robustness of protein structure and therefore of its action. The aim of this review is to consider modern understanding of physical principles of self-organization of protein structures and to overview such important features of this process, as finding out the unique protein structure among zillions alternatives, nucleation of the folding process and metastable folding intermediates. Towards this end we will consider the main experimental facts and simple, mostly phenomenological theoretical models. We will concentrate on relatively small (single-domain) water-soluble globular proteins (whose structure and especially folding are much better studied and understood than those of large or membrane and fibrous proteins) and consider kinetic and structural aspects of transition of initially unfolded protein chains into their final solid (“native”) 3D structures.

  1. Nova Event Logging System

    International Nuclear Information System (INIS)

    Calliger, R.J.; Suski, G.J.

    1981-01-01

    Nova is a 200 terawatt, 10-beam High Energy Glass Laser currently under construction at LLNL. This facility, designed to demonstrate the feasibility of laser driven inertial confinement fusion, contains over 5000 elements requiring coordinated control, data acquisition, and analysis functions. The large amounts of data that will be generated must be maintained over the life of the facility. Often the most useful but inaccessible data is that related to time dependent events associated with, for example, operator actions or experiment activity. We have developed an Event Logging System to synchronously record, maintain, and analyze, in part, this data. We see the system as being particularly useful to the physics and engineering staffs of medium and large facilities in that it is entirely separate from experimental apparatus and control devices. The design criteria, implementation, use, and benefits of such a system will be discussed

  2. Querying Workflow Logs

    Directory of Open Access Journals (Sweden)

    Yan Tang

    2018-01-01

    Full Text Available A business process or workflow is an assembly of tasks that accomplishes a business goal. Business process management is the study of the design, configuration/implementation, enactment and monitoring, analysis, and re-design of workflows. The traditional methodology for the re-design and improvement of workflows relies on the well-known sequence of extract, transform, and load (ETL, data/process warehousing, and online analytical processing (OLAP tools. In this paper, we study the ad hoc queryiny of process enactments for (data-centric business processes, bypassing the traditional methodology for more flexibility in querying. We develop an algebraic query language based on “incident patterns” with four operators inspired from Business Process Model and Notation (BPMN representation, allowing the user to formulate ad hoc queries directly over workflow logs. A formal semantics of this query language, a preliminary query evaluation algorithm, and a group of elementary properties of the operators are provided.

  3. Rill erosion in burned and salvage logged western montane forests: Effects of logging equipment type, traffic level, and slash treatment

    Science.gov (United States)

    Wagenbrenner, J. W.; Robichaud, P. R.; Brown, R. E.

    2016-10-01

    Following wildfires, forest managers often consider salvage logging burned trees to recover monetary value of timber, reduce fuel loads, or to meet other objectives. Relatively little is known about the cumulative hydrologic effects of wildfire and subsequent timber harvest using logging equipment. We used controlled rill experiments in logged and unlogged (control) forests burned at high severity in northern Montana, eastern Washington, and southern British Columbia to quantify rill overland flow and sediment production rates (fluxes) after ground-based salvage logging. We tested different types of logging equipment-feller-bunchers, tracked and wheeled skidders, and wheeled forwarders-as well as traffic levels and the addition of slash to skid trails as a best management practice. Rill experiments were done at each location in the first year after the fire and repeated in subsequent years. Logging was completed in the first or second post-fire year. We found that ground-based logging using heavy equipment compacted soil, reduced soil water repellency, and reduced vegetation cover. Vegetation recovery rates were slower in most logged areas than the controls. Runoff rates were higher in the skidder and forwarder plots than their respective controls in the Montana and Washington sites in the year that logging occurred, and the difference in runoff between the skidder and control plots at the British Columbia site was nearly significant (p = 0.089). Most of the significant increases in runoff in the logged plots persisted for subsequent years. The type of skidder, the addition of slash, and the amount of forwarder traffic did not significantly affect the runoff rates. Across the three sites, rill sediment fluxes were 5-1900% greater in logged plots than the controls in the year of logging, and the increases were significant for all logging treatments except the low use forwarder trails. There was no difference in the first-year sediment fluxes between the feller

  4. Interpretation of horizontal well production logs: influence of logging tool

    Energy Technology Data Exchange (ETDEWEB)

    Ozkan, E. [Colorado School of Mines, Boulder, CO (United States); Sarica, C. [Pennsylvania State Univ., College Park, PA (United States); Haci, M. [Drilling Measurements, Inc (United States)

    1998-12-31

    The influence of a production-logging tool on wellbore flow rate and pressure measurements was investigated, focusing on the disturbence caused by the production-logging tool and the coiled tubing on the original flow conditions in the wellbore. The investigation was carried out using an analytical model and single-phase liquid flow was assumed. Results showed that the production-logging tool influenced the measurements as shown by the deviation of the original flow-rate, pressure profiles and low-conductivity wellbores. High production rates increase the effect of the production-logging tool. Recovering or inferring the original flow conditions in the wellbore from the production-logging data is a very complex process which cannot be solved easily. For this reason, the conditions under which the information obtained by production-logging is meaningful is of considerable practical interest. 7 refs., 2 tabs., 15 figs.

  5. Greater autonomy at work

    NARCIS (Netherlands)

    Houtman, I.L.D.

    2004-01-01

    In the past 10 years, workers in the Netherlands increasingly report more decision-making power in their work. This is important for an economy in recession and where workers face greater work demands. It makes work more interesting, creates a healthier work environment, and provides opportunities

  6. Effects of gravity in folding

    Science.gov (United States)

    Minkel, Donald Howe

    Effects of gravity on buckle folding are studied using a Newtonian fluid finite element model of a single layer embedded between two thicker less viscous layers. The methods allow arbitrary density jumps, surface tension coefficients, resistance to slip at the interfaces, and tracking of fold growth to a large amplitudes. When density increases downward in two equal jumps, a layer buckles less and thickens more than with uniform density. When density increases upward in two equal jumps, it buckles more and thickens less. A low density layer with periodic thickness variations buckles more, sometimes explosively. Thickness variations form, even if not present initially. These effects are greater with; smaller viscosities, larger density jump, larger length scale, and slower shortening rate. They also depend on wavelength and amplitude, and these dependencies are described in detail. The model is applied to the explosive growth of the salt anticlines of the Paradox Basin, Colorado and Utah. There, shale (higher density) overlies salt (lower density). Methods for simulating realistic earth surface erosion and deposition conditions are introduced. Growth rates increase both with ease of slip at the salt-shale interface, and when earth surface relief stays low due to erosion and deposition. Model anticlines grow explosively, attaining growth rates and amplitudes close to those of the field examples. Fastest growing wavelengths are the same as seen in the field. It is concluded that a combination of partial-slip at the salt-shale interface, with reasonable earth surface conditions, promotes sufficiently fast buckling of the salt-shale interface due to density inversion alone. Neither basement faulting, nor tectonic shortening is required to account for the observed structures. Of fundamental importance is the strong tendency of gravity to promote buckling in low density layers with thickness variations. These develop, even if not present initially. folds

  7. Logging Concessions Enable Illegal Logging Crisis in the Peruvian Amazon

    Science.gov (United States)

    Finer, Matt; Jenkins, Clinton N.; Sky, Melissa A. Blue; Pine, Justin

    2014-04-01

    The Peruvian Amazon is an important arena in global efforts to promote sustainable logging in the tropics. Despite recent efforts to achieve sustainability, such as provisions in the US-Peru Trade Promotion Agreement, illegal logging continues to plague the region. We present evidence that Peru's legal logging concession system is enabling the widespread illegal logging via the regulatory documents designed to ensure sustainable logging. Analyzing official government data, we found that 68.3% of all concessions supervised by authorities were suspected of major violations. Of the 609 total concessions, nearly 30% have been cancelled for violations and we expect this percentage to increase as investigations continue. Moreover, the nature of the violations indicate that the permits associated with legal concessions are used to harvest trees in unauthorized areas, thus threatening all forested areas. Many of the violations pertain to the illegal extraction of CITES-listed timber species outside authorized areas. These findings highlight the need for additional reforms.

  8. Logging concessions enable illegal logging crisis in the Peruvian Amazon.

    Science.gov (United States)

    Finer, Matt; Jenkins, Clinton N; Sky, Melissa A Blue; Pine, Justin

    2014-04-17

    The Peruvian Amazon is an important arena in global efforts to promote sustainable logging in the tropics. Despite recent efforts to achieve sustainability, such as provisions in the US-Peru Trade Promotion Agreement, illegal logging continues to plague the region. We present evidence that Peru's legal logging concession system is enabling the widespread illegal logging via the regulatory documents designed to ensure sustainable logging. Analyzing official government data, we found that 68.3% of all concessions supervised by authorities were suspected of major violations. Of the 609 total concessions, nearly 30% have been cancelled for violations and we expect this percentage to increase as investigations continue. Moreover, the nature of the violations indicate that the permits associated with legal concessions are used to harvest trees in unauthorized areas, thus threatening all forested areas. Many of the violations pertain to the illegal extraction of CITES-listed timber species outside authorized areas. These findings highlight the need for additional reforms.

  9. Upland log volumes and conifer establishment patterns in two northern, upland old-growth redwood forests, a brief synopsis

    Science.gov (United States)

    Daniel J. Porter; John O. Sawyer

    2007-01-01

    We characterized the volume, weight and top surface area of naturally fallen logs in an old-growth redwood forest, and quantified conifer recruit densities on these logs and on the surrounding forest floor. We report significantly greater conifer recruit densities on log substrates as compared to the forest floor. Log substrate availability was calculated on a per...

  10. The Complexity of Folding Self-Folding Origami

    Directory of Open Access Journals (Sweden)

    Menachem Stern

    2017-12-01

    Full Text Available Why is it difficult to refold a previously folded sheet of paper? We show that even crease patterns with only one designed folding motion inevitably contain an exponential number of “distractor” folding branches accessible from a bifurcation at the flat state. Consequently, refolding a sheet requires finding the ground state in a glassy energy landscape with an exponential number of other attractors of higher energy, much like in models of protein folding (Levinthal’s paradox and other NP-hard satisfiability (SAT problems. As in these problems, we find that refolding a sheet requires actuation at multiple carefully chosen creases. We show that seeding successful folding in this way can be understood in terms of subpatterns that fold when cut out (“folding islands”. Besides providing guidelines for the placement of active hinges in origami applications, our results point to fundamental limits on the programmability of energy landscapes in sheets.

  11. The Complexity of Folding Self-Folding Origami

    Science.gov (United States)

    Stern, Menachem; Pinson, Matthew B.; Murugan, Arvind

    2017-10-01

    Why is it difficult to refold a previously folded sheet of paper? We show that even crease patterns with only one designed folding motion inevitably contain an exponential number of "distractor" folding branches accessible from a bifurcation at the flat state. Consequently, refolding a sheet requires finding the ground state in a glassy energy landscape with an exponential number of other attractors of higher energy, much like in models of protein folding (Levinthal's paradox) and other NP-hard satisfiability (SAT) problems. As in these problems, we find that refolding a sheet requires actuation at multiple carefully chosen creases. We show that seeding successful folding in this way can be understood in terms of subpatterns that fold when cut out ("folding islands"). Besides providing guidelines for the placement of active hinges in origami applications, our results point to fundamental limits on the programmability of energy landscapes in sheets.

  12. Factors that affect coseismic folds in an overburden layer

    Science.gov (United States)

    Zeng, Shaogang; Cai, Yongen

    2018-03-01

    Coseismic folds induced by blind thrust faults have been observed in many earthquake zones, and they have received widespread attention from geologists and geophysicists. Numerous studies have been conducted regarding fold kinematics; however, few have studied fold dynamics quantitatively. In this paper, we establish a conceptual model with a thrust fault zone and tectonic stress load to study the factors that affect coseismic folds and their formation mechanisms using the finite element method. The numerical results show that the fault dip angle is a key factor that controls folding. The greater the dip angle is, the steeper the fold slope. The second most important factor is the overburden thickness. The thicker the overburden is, the more gradual the fold. In this case, folds are difficult to identify in field surveys. Therefore, if a fold can be easily identified with the naked eye, the overburden is likely shallow. The least important factors are the mechanical parameters of the overburden. The larger the Young's modulus of the overburden is, the smaller the displacement of the fold and the fold slope. Strong horizontal compression and vertical extension in the overburden near the fault zone are the main mechanisms that form coseismic folds.

  13. SNG-logs at Skjern

    DEFF Research Database (Denmark)

    Korsbech, Uffe C C; Petersen, Jesper; Aage, Helle Karina

    1998-01-01

    Spectral Natural Gamma-ray logs have been run in two water supply borings at Skjern. The log data have been examined by a new technique - Noise Adjusted Singular Value Decomposition - in order to get a detailed and reliable picture of the distribution of uranium and thorium gamma-rays from heavy...

  14. Greater-confinement disposal

    International Nuclear Information System (INIS)

    Trevorrow, L.E.; Schubert, J.P.

    1989-01-01

    Greater-confinement disposal (GCD) is a general term for low-level waste (LLW) disposal technologies that employ natural and/or engineered barriers and provide a degree of confinement greater than that of shallow-land burial (SLB) but possibly less than that of a geologic repository. Thus GCD is associated with lower risk/hazard ratios than SLB. Although any number of disposal technologies might satisfy the definition of GCD, eight have been selected for consideration in this discussion. These technologies include: (1) earth-covered tumuli, (2) concrete structures, both above and below grade, (3) deep trenches, (4) augered shafts, (5) rock cavities, (6) abandoned mines, (7) high-integrity containers, and (8) hydrofracture. Each of these technologies employ several operations that are mature,however, some are at more advanced stages of development and demonstration than others. Each is defined and further described by information on design, advantages and disadvantages, special equipment requirements, and characteristic operations such as construction, waste emplacement, and closure

  15. More features, greater connectivity.

    Science.gov (United States)

    Hunt, Sarah

    2015-09-01

    Changes in our political infrastructure, the continuing frailties of our economy, and a stark growth in population, have greatly impacted upon the perceived stability of the NHS. Healthcare teams have had to adapt to these changes, and so too have the technologies upon which they rely to deliver first-class patient care. Here Sarah Hunt, marketing co-ordinator at Aid Call, assesses how the changing healthcare environment has affected one of its fundamental technologies - the nurse call system, argues the case for wireless such systems in terms of what the company claims is greater adaptability to changing needs, and considers the ever-wider range of features and functions available from today's nurse call equipment, particularly via connectivity with both mobile devices, and ancillaries ranging from enuresis sensors to staff attack alert 'badges'.

  16. Greater oil investment opportunities

    International Nuclear Information System (INIS)

    Arenas, Ismael Enrique

    1997-01-01

    Geologically speaking, Colombia is a very attractive country for the world oil community. According to this philosophy new and important steps are being taken to reinforce the oil sector: Expansion of the exploratory frontier by including a larger number of sedimentary areas, and the adoption of innovative contracting instruments. Colombia has to offer, Greater economic incentives for the exploration of new areas to expand the exploratory frontier, stimulation of exploration in areas with prospectivity for small fields. Companies may offer Ecopetrol a participation in production over and above royalties, without it's participating in the investments and costs of these fields, more favorable conditions for natural gas seeking projects, in comparison with those governing the terms for oil

  17. RNA folding: structure prediction, folding kinetics and ion electrostatics.

    Science.gov (United States)

    Tan, Zhijie; Zhang, Wenbing; Shi, Yazhou; Wang, Fenghua

    2015-01-01

    Beyond the "traditional" functions such as gene storage, transport and protein synthesis, recent discoveries reveal that RNAs have important "new" biological functions including the RNA silence and gene regulation of riboswitch. Such functions of noncoding RNAs are strongly coupled to the RNA structures and proper structure change, which naturally leads to the RNA folding problem including structure prediction and folding kinetics. Due to the polyanionic nature of RNAs, RNA folding structure, stability and kinetics are strongly coupled to the ion condition of solution. The main focus of this chapter is to review the recent progress in the three major aspects in RNA folding problem: structure prediction, folding kinetics and ion electrostatics. This chapter will introduce both the recent experimental and theoretical progress, while emphasize the theoretical modelling on the three aspects in RNA folding.

  18. Engineering aspects of radiometric logging

    International Nuclear Information System (INIS)

    Huppert, P.

    1982-01-01

    Engineering problems encountered in the development of nuclear borehole logging techniques are discussed. Spectrometric techniques require electronic stability of the equipment. In addition the electronics must be capable of handling high count rates of randomly distributed pulses of fast rise time from the detector and the systems must be designed so that precise calibration is possible under field operating conditions. Components of a logging system are discussed in detail. They include the logging probe (electronics, detector, high voltage supply, preamplifier), electronic instrumentation for data collection and processing and auxiliary equipment

  19. Log-balanced combinatorial sequences

    Directory of Open Access Journals (Sweden)

    Tomislav Došlic

    2005-01-01

    Full Text Available We consider log-convex sequences that satisfy an additional constraint imposed on their rate of growth. We call such sequences log-balanced. It is shown that all such sequences satisfy a pair of double inequalities. Sufficient conditions for log-balancedness are given for the case when the sequence satisfies a two- (or more- term linear recurrence. It is shown that many combinatorially interesting sequences belong to this class, and, as a consequence, that the above-mentioned double inequalities are valid for all of them.

  20. Vocal fold injection medialization laryngoplasty.

    Science.gov (United States)

    Modi, Vikash K

    2012-01-01

    Unilateral vocal fold paralysis (UVFP) can cause glottic insufficiency that can result in hoarseness, chronic cough, dysphagia, and/or aspiration. In rare circumstances, UVFP can cause airway obstruction necessitating a tracheostomy. The treatment options for UVFP include observation, speech therapy, vocal fold injection medialization laryngoplasty, thyroplasty, and laryngeal reinnervation. In this chapter, the author will discuss the technique of vocal fold injection for medialization of a UVFP. Copyright © 2012 S. Karger AG, Basel.

  1. VT Route Log Points 2017

    Data.gov (United States)

    Vermont Center for Geographic Information — This data layer is used with VTrans' Integrated Route Log System (IRA). It is also used to calibrate the linear referencing systems, including the End-to-End and...

  2. New materials for fireplace logs

    Science.gov (United States)

    Kieselback, D. J.; Smock, A. W.

    1971-01-01

    Fibrous insulation and refractory concrete are used for logs as well as fireproof walls, incinerator bricks, planters, and roof shingles. Insulation is lighter and more shock resistant than fireclay. Lightweight slag bonded with refractory concrete serves as aggregrate.

  3. Palm distributions for log Gaussian Cox processes

    DEFF Research Database (Denmark)

    Coeurjolly, Jean-Francois; Møller, Jesper; Waagepetersen, Rasmus Plenge

    2017-01-01

    This paper establishes a remarkable result regarding Palm distributions for a log Gaussian Cox process: the reduced Palm distribution for a log Gaussian Cox process is itself a log Gaussian Cox process that only differs from the original log Gaussian Cox process in the intensity function. This new...... result is used to study functional summaries for log Gaussian Cox processes....

  4. How old is your fold?

    NARCIS (Netherlands)

    Winstanley, Henry F.; Abeln, Sanne; Deane, Charlotte M.

    Motivation: At present there exists no age estimate for the different protein structures found in nature. It has become clear from occurrence studies that different folds arose at different points in evolutionary time. An estimation of the age of different folds would be a starting point for many

  5. Teaching computers to fold proteins

    DEFF Research Database (Denmark)

    Winther, Ole; Krogh, Anders Stærmose

    2004-01-01

    A new general algorithm for optimization of potential functions for protein folding is introduced. It is based upon gradient optimization of the thermodynamic stability of native folds of a training set of proteins with known structure. The iterative update rule contains two thermodynamic averages...

  6. Log quality enhancement: A systematic assessment of logging company wellsite performance and log quality

    International Nuclear Information System (INIS)

    Farnan, R.A.; Mc Hattie, C.M.

    1984-01-01

    To improve the monitoring of logging company performance, computer programs were developed to assess information en masse from log quality check lists completed on wellsite by the service company engineer and Phillips representative. A study of all logging jobs performed by different service companies for Phillips in Oklahoma (panhandle excepted) during 1982 enabled several pertinent and beneficial interpretations to be made. Company A provided the best tool and crew service. Company B incurred an excessive amount of lost time related to tool failure, in particular the neutron-density tool combination. Company C, although used only three times, incurred no lost time. With a reasonable data base valid conclusions were made pertaining, for example, to repeated tool malfunctions. The actual logs were then assessed for quality

  7. Periodic folding of viscous sheets

    Science.gov (United States)

    Ribe, Neil M.

    2003-09-01

    The periodic folding of a sheet of viscous fluid falling upon a rigid surface is a common fluid mechanical instability that occurs in contexts ranging from food processing to geophysics. Asymptotic thin-layer equations for the combined stretching-bending deformation of a two-dimensional sheet are solved numerically to determine the folding frequency as a function of the sheet’s initial thickness, the pouring speed, the height of fall, and the fluid properties. As the buoyancy increases, the system bifurcates from “forced” folding driven kinematically by fluid extrusion to “free” folding in which viscous resistance to bending is balanced by buoyancy. The systematics of the numerically predicted folding frequency are in good agreement with laboratory experiments.

  8. Pulsed neutron generator for logging

    International Nuclear Information System (INIS)

    Thibideau, F.D.

    1977-01-01

    A pulsed neutron generator for uranium logging is described. This generator is one component of a prototype uranium logging probe which is being developed by SLA to detect, and assay, uranium by borehole logging. The logging method is based on the measurement of epithermal neutrons resulting from the prompt fissioning of uranium from a pulsed source of 17.6 MeV neutrons. An objective of the prototype probe was that its diameter not exceed 2.75 inches, which would allow its use in conventional rotary drill holes of 4.75-inch diameter. This restriction limited the generator to a maximum 2.375-inch diameter. The performance requirements for the neutron generator specified that it operate with a nominal output of 5 x 10 6 neutrons/pulse at up to 100 pulses/second for a one-hour period. The development of a neutron generator meeting the preliminary design goals was completed and two prototype models were delivered to SLA. These two generators have been used by SLA to log a number of boreholes in field evaluation of the probe. The results of the field evaluations have led to the recommendation of several changes to improve the probe's operation. Some of these changes will require additional development effort on the neutron generator. It is expected that this work will be performed during 1977. The design and operation of the first prototype neutron generators is described

  9. Hardwood log grades and lumber grade yields for factory lumber logs

    Science.gov (United States)

    Leland F. Hanks; Glenn L. Gammon; Robert L. Brisbin; Everette D. Rast

    1980-01-01

    The USDA Forest Service Standard Grades for Hardwood Factory Lumber Logs are described, and lumber grade yields for 16 species and 2 species groups are presented by log grade and log diameter. The grades enable foresters, log buyers, and log sellers to select and grade those log suitable for conversion into standard factory grade lumber. By using the apropriate lumber...

  10. The log S -log N distribution of gamma ray brust

    International Nuclear Information System (INIS)

    Yamagami, Takamasa; Nishimura, Jun; Fujii, Masami

    1982-01-01

    The relation between the size S and the frequency N of gamma ray burst has been studied. This relation may be determined from the celestial distribution of gamma ray burst sources. The present analysis gives that the log S - log N relation for any direction is determined by the celestial distribution of gamma ray burst sources. The observed bursts were analyzed. The celestial distribution of gamma ray burst sources was observed by the satellites of USSR. The results showed that the distribution seemed to be isotropic. However, the calculated log S - log N relation based on the isotropic distribution wasF in disagreement with the observed ones. As the result of analysis, it was found that the observed bursts missed low energy part because of the threshold of detectors. The levels of discrimination of detection were not clear. When a proper threshold level is set for each type of burst, and the size of bursts is determined, the above mentioned discrepancy will be deleted regardless of luminosity and the spatial distribution of bursts. (Kato, T.)

  11. Mud Logging; Control geologico en perforaciones petroliferas (Mud Logging)

    Energy Technology Data Exchange (ETDEWEB)

    Pumarega Lafuente, J.C.

    1994-12-31

    Mud Logging is an important activity in the oil field and it is a key job in drilling operations, our duties are the acquisition, collection and interpretation of the geological and engineering data at the wellsite, also inform the client immediately of any significant changes in the well. (Author)

  12. Borehole logging for uranium exploration

    International Nuclear Information System (INIS)

    1982-01-01

    The present text has been prepared taking into account the requirements of both developing countries, which might be at an incipient stage of uranium exploration, and industrialized countries, where more advanced exploration and resource evaluation techniques are commonly in use. While it was felt necessary to include some discussion of exploration concepts and fundamental physical principles underlying various logging methods, it was not the intention of the consultants to provide a thorough, detailed explanation of the various techniques, or even to give a comprehensive listing thereof. However, a list of references has been included, and it is strongly recommended that the serious student of mineral logging consult this list for further guidance

  13. Pulsed neutron porosity logging system

    International Nuclear Information System (INIS)

    Smith, H.D. Jr.; Smith, M.P.; Schultz, W.E.

    1978-01-01

    An improved pulsed neutron porosity logging system is provided in the present invention. A logging tool provided with a 14 MeV pulsed neutron source, an epithermal neutron detector, and a fast neutron detector is moved through a borehole. Repetitive bursts of neutrons irradiate the earth formations and, during the bursts, the fast neutron population is sampled. During the interval between bursts the epithermal neutron population is sampled along with background gamma radiation due to lingering thermal neutrons. The fast and epithermal neutron population measurements are combined to provide a measurement of formation porosity

  14. Curved Folded Plate Timber Structures

    OpenAIRE

    Buri, Hans Ulrich; Stotz, Ivo; Weinand, Yves

    2011-01-01

    This work investigates the development of a Curved Origami Prototype made with timber panels. In the last fifteen years the timber industry has developed new, large size, timber panels. Composition and dimensions of these panels and the possibility of milling them with Computer Numerical Controlled machines shows great potential for folded plate structures. To generate the form of these structures we were inspired by Origami, the Japanese art of paper folding. Common paper tessellations are c...

  15. Logging Work Injuries in Appalachia

    Science.gov (United States)

    Charles H. Wolf; Gilbert P. Dempsey

    1978-01-01

    Logging accidents are costly. They may bring pain to injured workers, hardship to their families, and higher insurance premiums and lower productivity to their employers. Our analysis of 1,172 injuries in central Appalachia reveals that nearly half of all time lost-and almost all fatalities-resulted from accidents during felling and unloading. The largest proportion of...

  16. Log files for testing usability

    NARCIS (Netherlands)

    Klein Teeselink, G.; Siepe, A.H.M.; Pijper, de J.R.

    1999-01-01

    The aim of this study is to gain insight in the usefulness of log file analysis as a method to evaluate the usability of individual interface components and their influence on the usability of the overall user interface. We selected a music player as application, with four different interfaces and

  17. Hardwood log supply: a broader perspective

    Science.gov (United States)

    Iris Montague; Adri Andersch; Jan Wiedenbeck; Urs. Buehlmann

    2015-01-01

    At regional and state meetings we talk with others in our business about the problems we face: log exports, log quality, log markets, logger shortages, cash flow problems, the weather. These are familiar talking points and real and persistent problems. But what is the relative importance of these problems for log procurement in different regions of...

  18. Unsupervised signature extraction from forensic logs

    NARCIS (Netherlands)

    Thaler, S.M.; Menkovski, V.; Petkovic, M.; Altun, Y.; Das, K.; Mielikäinen, T.; Malerba, D.; Stefanowski, J.; Read, J.; Žitnik, M.; Ceci, M.

    2017-01-01

    Signature extraction is a key part of forensic log analysis. It involves recognizing patterns in log lines such that log lines that originated from the same line of code are grouped together. A log signature consists of immutable parts and mutable parts. The immutable parts define the signature, and

  19. A method of estimating log weights.

    Science.gov (United States)

    Charles N. Mann; Hilton H. Lysons

    1972-01-01

    This paper presents a practical method of estimating the weights of logs before they are yarded. Knowledge of log weights is required to achieve optimum loading of modern yarding equipment. Truckloads of logs are weighed and measured to obtain a local density index (pounds per cubic foot) for a species of logs. The density index is then used to estimate the weights of...

  20. Nondestructive evaluation for sorting red maple logs

    Science.gov (United States)

    Xiping Wang; Robert J. Ross; David W. Green; Karl Englund; Michael Wolcott

    2000-01-01

    Existing log grading procedures in the United States make only visual assessments of log quality. These procedures do not incorporate estimates of the modulus of elasticity (MOE) of logs. It is questionable whether the visual grading procedures currently used for logs adequately assess the potential quality of structural products manufactured from them, especially...

  1. Nuclear well logging in hydrology

    International Nuclear Information System (INIS)

    1971-01-01

    The optimum development of regional and local groundwater resources requires a quantitative evaluation of its aquifers and aquicludes, and of the physical and chemical properties relevant to the recharge to and withdrawal of water from them. If an understanding of the groundwater regime is to be obtained, geological observations at outcrop must be augmented by subsurface measurements of the strata and the waters they contain. Measurements of many hydrological and geological parameters can be made in situ by nuclear geophysical well-logging methods. Very simply, well logging consists of lowering a measuring probe into a well and making a continuous record of the variations of a particular parameter with depth. In most circumstances, repetition of the measurements under differing hydrodynamic conditions results in a better definition of the flow regime in the aquifer. Nuclear well-logging techniques have for some years been capable of solving a number of the sub-surface measurement problems faced by hydrogeologists. However, the present usage of these methods varies from country to country and the literature concerning applications is scattered in the professional journals of several disciplines. The objective of this report is to include in a single reference volume descriptions of the physical principles of nuclear logging methods, their applications to hydrogeological problems and their limitations on a level suitable for the practising hydrologists with a limited knowledge of nuclear physics. The Working Group responsible for compiling the report recommended that it should cover a broad spectrum of hydrogeological investigations and problems. For example, it saw no valid reason to distinguish for the purposes of the report between well-logging applications for water-supply purposes and for water-flooding studies in the petroleum industry. Neutron measurements made for soil-moisture determinations in the unsaturated zone have been specifically omitted, however, as

  2. Repairing the vibratory vocal fold.

    Science.gov (United States)

    Long, Jennifer L

    2018-01-01

    A vibratory vocal fold replacement would introduce a new treatment paradigm for structural vocal fold diseases such as scarring and lamina propria loss. This work implants a tissue-engineered replacement for vocal fold lamina propria and epithelium in rabbits and compares histology and function to injured controls and orthotopic transplants. Hypotheses were that the cell-based implant would engraft and control the wound response, reducing fibrosis and restoring vibration. Translational research. Rabbit adipose-derived mesenchymal stem cells (ASC) were embedded within a three-dimensional fibrin gel, forming the cell-based outer vocal fold replacement (COVR). Sixteen rabbits underwent unilateral resection of vocal fold epithelium and lamina propria, as well as reconstruction with one of three treatments: fibrin glue alone with healing by secondary intention, replantation of autologous resected vocal fold cover, or COVR implantation. After 4 weeks, larynges were examined histologically and with phonation. Fifteen rabbits survived. All tissues incorporated well after implantation. After 1 month, both graft types improved histology and vibration relative to injured controls. Extracellular matrix (ECM) of the replanted mucosa was disrupted, and ECM of the COVR implants remained immature. Immune reaction was evident when male cells were implanted into female rabbits. Best histologic and short-term vibratory outcomes were achieved with COVR implants containing male cells implanted into male rabbits. Vocal fold cover replacement with a stem cell-based tissue-engineered construct is feasible and beneficial in acute rabbit implantation. Wound-modifying behavior of the COVR implant is judged to be an important factor in preventing fibrosis. NA. Laryngoscope, 128:153-159, 2018. © 2017 The American Laryngological, Rhinological and Otological Society, Inc.

  3. Uranium logging in earth formations

    International Nuclear Information System (INIS)

    Givens, W.W.

    1979-01-01

    A technique is provided for assaying the formations surrounding a borehole for uranium. A borehole logging tool cyclically irradiates the formations with neutrons and responds to neutron fluxes produced during the period of time that prompt neutrons are being produced by the neutron fission of uranium in the formations. A borehole calibration tool employs a steady-state (continuous output) neutron source, firstly, to produce a response to neutron fluxes in models having known concentrations of uranium and, secondly, to to produce a response to neutron fluxes in the formations surrounding the borehole. The neutron flux responses of the borehole calibration tool in both the model and the formations surrounding the borehole are utilized to correct the neutron flux response of the borehole logging tool for the effects of epithermal/thermal neutron moderation, scattering, and absorption within the borehole itself

  4. NoFold: RNA structure clustering without folding or alignment.

    Science.gov (United States)

    Middleton, Sarah A; Kim, Junhyong

    2014-11-01

    Structures that recur across multiple different transcripts, called structure motifs, often perform a similar function-for example, recruiting a specific RNA-binding protein that then regulates translation, splicing, or subcellular localization. Identifying common motifs between coregulated transcripts may therefore yield significant insight into their binding partners and mechanism of regulation. However, as most methods for clustering structures are based on folding individual sequences or doing many pairwise alignments, this results in a tradeoff between speed and accuracy that can be problematic for large-scale data sets. Here we describe a novel method for comparing and characterizing RNA secondary structures that does not require folding or pairwise alignment of the input sequences. Our method uses the idea of constructing a distance function between two objects by their respective distances to a collection of empirical examples or models, which in our case consists of 1973 Rfam family covariance models. Using this as a basis for measuring structural similarity, we developed a clustering pipeline called NoFold to automatically identify and annotate structure motifs within large sequence data sets. We demonstrate that NoFold can simultaneously identify multiple structure motifs with an average sensitivity of 0.80 and precision of 0.98 and generally exceeds the performance of existing methods. We also perform a cross-validation analysis of the entire set of Rfam families, achieving an average sensitivity of 0.57. We apply NoFold to identify motifs enriched in dendritically localized transcripts and report 213 enriched motifs, including both known and novel structures. © 2014 Middleton and Kim; Published by Cold Spring Harbor Laboratory Press for the RNA Society.

  5. Neutron die-away well logging

    International Nuclear Information System (INIS)

    Jacobson, L.A.

    1976-01-01

    Neutron die-away well logging is extensively used for the location and monitoring of hydrocarbon zones in cased wells. Casing prohibits the use of conventional open-hole electrical resistivity methods. Through an appropriate interpretation of the measured capture cross-section, it is possible to determine the fractional hydrocarbon content of the rock pore volume, provided that the interstitial water is moderately saline (Σ/sub w/ greater than or equal to .035 cm -1 ). Special sealed D-T accelerator tubes and high voltage supplies have been developed for this purpose. They must fit into a 25 mm design circle and operate at 175 0 C, producing approximately 10 8 neutron/sec average in repetitive bursts. In the Schlumberger method an electronic servo-system adjusts burst and measure-gate timing to minimize statistical uncertainty regardless of die-away time

  6. Logística empresarial

    OpenAIRE

    Feres Sahid

    1987-01-01

    RESUMEN El concepto logístico, se pudo ver reflejado con exactitud desde el punto de vista etimológico e histórico a través de la revista de la E.A.N; ya que  tiene cierto carácter militar que lo hace característico a la gestión empresarial y de esto se formula un debate definitivo de este concepto.

  7. Chemical logging of geothermal wells

    Science.gov (United States)

    Allen, C.A.; McAtee, R.E.

    The presence of geothermal aquifers can be detected while drilling in geothermal formations by maintaining a chemical log of the ratio of the concentrations of calcium to carbonate and bicarbonate ions in the return drilling fluid. A continuous increase in the ratio of the concentrations of calcium to carbonate and bicarbonate ions is indicative of the existence of a warm or hot geothermal aquifer at some increased depth.

  8. Audit Log for Forensic Photography

    Science.gov (United States)

    Neville, Timothy; Sorell, Matthew

    We propose an architecture for an audit log system for forensic photography, which ensures that the chain of evidence of a photograph taken by a photographer at a crime scene is maintained from the point of image capture to its end application at trial. The requirements for such a system are specified and the results of experiments are presented which demonstrate the feasibility of the proposed approach.

  9. Logística empresarial

    Directory of Open Access Journals (Sweden)

    Feres Sahid

    1987-04-01

    Full Text Available RESUMEN El concepto logístico, se pudo ver reflejado con exactitud desde el punto de vista etimológico e histórico a través de la revista de la E.A.N; ya que  tiene cierto carácter militar que lo hace característico a la gestión empresarial y de esto se formula un debate definitivo de este concepto.

  10. Neutron capture in borehole logging

    International Nuclear Information System (INIS)

    Randall, R.R.

    1981-01-01

    The use is described of a pulsed source of fast neutrons and a radiation detector to measure the thermal neutron population decay rate in a well logging instrument. The macroscopic neutron absorption cross-section is calculated by taking the natural logarithm of the ratio of the detected radiation counts occurring within two measurement intervals of fixed duration and starting at a fixed time after a neutron burst. (U.K.)

  11. Borehole logging in uranium exploration

    International Nuclear Information System (INIS)

    Kulkarni, N.H.

    1992-01-01

    The ultimate objective of exploration by drilling as far as Atomic Minerals Division is concerned is to locate the ore zone in the subsurface, draw samples and analyze them for their metal content. The presence of the ore zone is also indicated by gamma-ray logging of the borehole. A gamma-ray detector is lowered in the borehole and precise depth and grade of the ore zone is established. This helps the geologist in correlating the ore horizon with the surface outcrop or the ore zone intercepted in adjoining boreholes and in deciding about further drilling and location of boreholes. Most commonly, total gamma measurements are made although some units capable of measuring the gamma-ray spectrum are also in use. It is possible to know if the mineralization is due to uranium without waiting for the laboratory results. The present write up gives a brief account of the principles, equipment and methods of borehole gamma-ray logging including density and self-potential logging. (author). 8 refs., 5 figs

  12. The four-fold way

    International Nuclear Information System (INIS)

    Terazawa, H.

    1986-01-01

    The four-fold way is proposed in a minimal composite model of quarks and leptons. Various new pictures and consequences are presented and discussed. They include 1) generation, 2) quark-lepton mass spectrum, 3) quark mixing, 4) supersymmetry, 5) effective gauge theory. (author)

  13. Dynamic Planar Convex Hull with Optimal Query Time and O(log n · log log n ) Update Time

    DEFF Research Database (Denmark)

    Brodal, Gerth Stølting; Jakob, Riko

    2000-01-01

    The dynamic maintenance of the convex hull of a set of points in the plane is one of the most important problems in computational geometry. We present a data structure supporting point insertions in amortized O(log n · log log log n) time, point deletions in amortized O(log n · log log n) time......, and various queries about the convex hull in optimal O(log n) worst-case time. The data structure requires O(n) space. Applications of the new dynamic convex hull data structure are improved deterministic algorithms for the k-level problem and the red-blue segment intersection problem where all red and all...

  14. Visible dormant buds as related to tree diameter and log position

    Science.gov (United States)

    H. Clay Smith

    1967-01-01

    Red oaks and yellow-poplars in a stand of second-growth cove hardwoods in West Virginia were studied to determine whether visible dormant buds are related to tree size or log position. No correlation was found between dormant buds and tree size, for either species; but yellow-poplars had a significantly greater number of buds on the upper log.

  15. Data Mining of Network Logs

    Science.gov (United States)

    Collazo, Carlimar

    2011-01-01

    The statement of purpose is to analyze network monitoring logs to support the computer incident response team. Specifically, gain a clear understanding of the Uniform Resource Locator (URL) and its structure, and provide a way to breakdown a URL based on protocol, host name domain name, path, and other attributes. Finally, provide a method to perform data reduction by identifying the different types of advertisements shown on a webpage for incident data analysis. The procedures used for analysis and data reduction will be a computer program which would analyze the URL and identify and advertisement links from the actual content links.

  16. Neutron borehole logging correction technique

    International Nuclear Information System (INIS)

    Goldman, L.H.

    1978-01-01

    In accordance with an illustrative embodiment of the present invention, a method and apparatus is disclosed for logging earth formations traversed by a borehole in which an earth formation is irradiated with neutrons and gamma radiation produced thereby in the formation and in the borehole is detected. A sleeve or shield for capturing neutrons from the borehole and producing gamma radiation characteristic of that capture is provided to give an indication of the contribution of borehole capture events to the total detected gamma radiation. It is then possible to correct from those borehole effects the total detected gamma radiation and any earth formation parameters determined therefrom

  17. Benchmark neutron porosity log calculations

    International Nuclear Information System (INIS)

    Little, R.C.; Michael, M.; Verghese, K.; Gardner, R.P.

    1989-01-01

    Calculations have been made for a benchmark neutron porosity log problem with the general purpose Monte Carlo code MCNP and the specific purpose Monte Carlo code McDNL. For accuracy and timing comparison purposes the CRAY XMP and MicroVax II computers have been used with these codes. The CRAY has been used for an analog version of the MCNP code while the MicroVax II has been used for the optimized variance reduction versions of both codes. Results indicate that the two codes give the same results within calculated standard deviations. Comparisons are given and discussed for accuracy (precision) and computation times for the two codes

  18. 29 CFR 1918.88 - Log operations.

    Science.gov (United States)

    2010-07-01

    ...) SAFETY AND HEALTH REGULATIONS FOR LONGSHORING Handling Cargo § 1918.88 Log operations. (a) Working in..., the employer shall ensure that employees remain clear of areas where logs being dumped could strike...

  19. Artificial intelligence approach to interwell log correlation

    Energy Technology Data Exchange (ETDEWEB)

    Lim, Jong-Se [Korea Maritime University, Pusan(Korea); Kang, Joo Myung [Seoul National University, Seoul(Korea); Kim, Jung Whan [Korea National Oil Corp., Anyang(Korea)

    2000-04-30

    This paper describes a new approach to automated interwell log correlation using artificial intelligence and principal component analysis. The approach to correlate wire line logging data is on the basis of a large set of subjective rules that are intended to represent human logical processes. The data processed are mainly the qualitative information such as the characteristics of the shapes extracted along log traces. The apparent geologic zones are identified by pattern recognition for the specific characteristics of log trace collected as a set of objects by object oriented programming. The correlation of zones between wells is made by rule-based inference program. The reliable correlation can be established from the first principal component logs derived from both the important information around well bore and the largest common part of variances of all available well log data. Correlation with field log data shows that this approach can make interwell log correlation more reliable and accurate. (author). 6 refs., 7 figs.

  20. Face logging in Copenhagen Limestone, Denmark

    DEFF Research Database (Denmark)

    Jakobsen, Lisa; Foged, Niels Nielsen; Erichsen, Lars

    2015-01-01

    tunnel in Copenhagen more than 2.5 km face logs were made in 467 locations at underground stations, shafts, caverns and along bored tunnels. Over 160 geotechnical boreholes, many with geophysical logging were executed prior to construction works. The bedrock consists of Paleogene "Copenhagen limestone......The requirement for excavation support can be assessed from face logging. Face logs can also improve our knowledge of lithological and structural conditions within bedrock and supplement information from boreholes and geophysical logs. During the construction of 8 km metro tunnel and 4 km heating....... The induration degrees recorded in face logs and boreholes are compared and correlated. Distinct geophysical log markers are used to divide the limestone into three units. These marker horizons are correlated between face logs and geotechnical boreholes. A 3D model of the strength variations recorded within...

  1. Tucker Wireline Open Hole Wireline Logging; FINAL

    International Nuclear Information System (INIS)

    Milliken, M.

    2002-01-01

    The Tucker Wireline unit ran a suite of open hole logs right behind the RMOTC logging contractor for comparison purposes. The tools included Dual Laterolog, Phased Induction, BHC Sonic, and Density-Porosity

  2. Origami-Inspired Folding of Thick, Rigid Panels

    Science.gov (United States)

    Trease, Brian P.; Thomson, Mark W.; Sigel, Deborah A.; Walkemeyer, Phillip E.; Zirbel, Shannon; Howell, Larry; Lang, Robert

    2014-01-01

    To achieve power of 250 kW or greater, a large compression ratio of stowed-to-deployed area is needed. Origami folding patterns were used to inspire the folding of a solar array to achieve synchronous deployment; however, origami models are generally created for near-zero-thickness material. Panel thickness is one of the main challenges of origami-inspired design. Three origami-inspired folding techniques (flasher, square twist, and map fold) were created with rigid panels and hinges. Hinge components are added to the model to enable folding of thick, rigid materials. Origami models are created assuming zero (or near zero) thickness. When a material with finite thickness is used, the panels are required to bend around an increasingly thick fold as they move away from the center of the model. The two approaches for dealing with material thickness are to use membrane hinges to connect the panels, or to add panel hinges, or hinges of the same thickness, at an appropriate width to enable folding.

  3. Force generation by titin folding.

    Science.gov (United States)

    Mártonfalvi, Zsolt; Bianco, Pasquale; Naftz, Katalin; Ferenczy, György G; Kellermayer, Miklós

    2017-07-01

    Titin is a giant protein that provides elasticity to muscle. As the sarcomere is stretched, titin extends hierarchically according to the mechanics of its segments. Whether titin's globular domains unfold during this process and how such unfolded domains might contribute to muscle contractility are strongly debated. To explore the force-dependent folding mechanisms, here we manipulated skeletal-muscle titin molecules with high-resolution optical tweezers. In force-clamp mode, after quenching the force (force trace contained rapid fluctuations and a gradual increase of average force, indicating that titin can develop force via dynamic transitions between its structural states en route to the native conformation. In 4 M urea, which destabilizes H-bonds hence the consolidated native domain structure, the net force increase disappeared but the fluctuations persisted. Thus, whereas net force generation is caused by the ensemble folding of the elastically-coupled domains, force fluctuations arise due to a dynamic equilibrium between unfolded and molten-globule states. Monte-Carlo simulations incorporating a compact molten-globule intermediate in the folding landscape recovered all features of our nanomechanics results. The ensemble molten-globule dynamics delivers significant added contractility that may assist sarcomere mechanics, and it may reduce the dissipative energy loss associated with titin unfolding/refolding during muscle contraction/relaxation cycles. © 2017 The Protein Society.

  4. The Mesozoic-Cenozoic tectonic evolution of the Greater Caucasus

    NARCIS (Netherlands)

    Saintot, A.N.; Brunet, M.F.; Yakovlev, F.; Sébrier, M.; Stephenson, R.A.; Ershov, A.V.; Chalot-Prat, F.; McCann, T.

    2006-01-01

    The Greater Caucasus (GC) fold-and-thrust belt lies on the southern deformed edge of the Scythian Platform (SP) and results from the Cenoozoic structural inversion of a deep marine Mesozoic basin in response to the northward displacement of the Transcaucasus (lying south of the GC subsequent to the

  5. Selective logging in the Brazilian Amazon.

    Science.gov (United States)

    G. P. Asner; D. E. Knapp; E. N. Broadbent; P. J. C. Oliveira; M Keller; J. N. Silva

    2005-01-01

    Amazon deforestation has been measured by remote sensing for three decades. In comparison, selective logging has been mostly invisible to satellites. We developed a large-scale, high-resolution, automated remote-sensing analysis of selective logging in the top five timber-producing states of the Brazilian Amazon. Logged areas ranged from 12,075 to 19,823 square...

  6. Linking log quality with product performance

    Science.gov (United States)

    D. W. Green; Robert Ross

    1997-01-01

    In the United States, log grading procedures use visual assessment of defects, in relation to the log scaling diameter, to estimate the yield of lumber that maybe expected from the log. This procedure was satisfactory when structural grades were based only on defect size and location. In recent years, however, structural products have increasingly been graded using a...

  7. Selective logging and its relation to deforestation

    Science.gov (United States)

    Gregory P. Asner; Michael Keller; Marco Lentini; Frank Merry; Souza Jr. Carlos

    2009-01-01

    Selective logging is a major contributor to the social, economic, and ecological dynamics of Brazilian Amazonia. Logging activities have expanded from low-volume floodplain harvests in past centuries to high-volume operations today that take about 25 million m3 of wood from the forest each year. The most common high-impact conventional and often illegal logging...

  8. Pacific Rim log trade: determinants and trends.

    Science.gov (United States)

    Donald F. Flora; Andrea L. Anderson; Wendy J. McGinnls

    1991-01-01

    Pacific Rim trade in softwood logs amounts to about $3 billion annually, of which the U.S. share is about $2 billion. Log exporting is a significant part of the forest economy in the Pacific Northwest. The 10 major Pacific Rim log-trading client and competitor countries differ widely in their roles in trade and in their policies affecting the industry.

  9. Well logging radioactive detector assembly

    International Nuclear Information System (INIS)

    Osburn, T.D.

    1992-01-01

    This patent describes a well logging instrument of the type having a radioactive logging sub having a sealed chamber and have a radioactive source for emitting radioactive energy into the well formation, the instrument having a radioactive energy detector for detecting gamma rays resulting from the emission of the radioactive energy into the well formation, and means for pressing the sub against the well of the well, an improved Dewar flask for the detector. It comprises: an inner housing formed of titanium and containing the detector; an outer housing formed of titanium, having a cylindrical side wall surrounding the inner housing and separated by a clearance which is evacuated, the outer housing being located within the sealed chamber in the sub of the instrument; a window section formed in the side wall of the outer housing adjacent the detector and on a side of the side wall closest to the wall of the well when the sub is pressed against the wall of the well; and wherein the inner housing has a cylindrical side wall that is of lesser wall thickness than the wall thickness of the side wall of the outer housing other than in the window section

  10. EFSA NDA Panel (EFSA Panel on Dietetic Products, Nut rition and Allergies ) , 2013. Scientific Opinion on the substantiation of a health claim related to the c onsum ption of 2 g/day of plant stanols (as plant stanol ester s ) as part of a diet low in saturated fat and a two - fold greater, reduction in blood LDL - chol esterol concentrations compared to the consumption of a diet low in saturated fat alone pursuant to Article 14 of Regulation (EC) No 1924/2006

    DEFF Research Database (Denmark)

    Tetens, Inge

    Following an application from McNeil Nutritionals and Raisio Nutrition Ltd, submitted for authorisation of a health claim pursuant to Article 14 of Regulation (EC) No 1924/2006 via the Competent Authority of the United Kingdom, the Panel on Dietetic Products, Nutrition and Allergies (NDA) was asked...... to deliver an opinion on the scientific substantiation of a health claim related to the consumption of 2 g/day of plant stanols (as plant stanol esters) as part of a diet low in saturated fat and a two-fold greater reduction in blood LDL-cholesterol concentrations compared to the consumption of a diet low...... an evaluation of the quantitative effects of diets low in saturated fat per se on blood LDL-cholesterol concentrations. Therefore, the effect of consuming 2 g/day plant stanols as part of a diet low in saturated fat relative to the effect of consuming a diet low in saturated fat alone cannot be determined...

  11. Improving decoy databases for protein folding algorithms

    KAUST Repository

    Lindsey, Aaron

    2014-01-01

    Copyright © 2014 ACM. Predicting protein structures and simulating protein folding are two of the most important problems in computational biology today. Simulation methods rely on a scoring function to distinguish the native structure (the most energetically stable) from non-native structures. Decoy databases are collections of non-native structures used to test and verify these functions. We present a method to evaluate and improve the quality of decoy databases by adding novel structures and removing redundant structures. We test our approach on 17 different decoy databases of varying size and type and show significant improvement across a variety of metrics. We also test our improved databases on a popular modern scoring function and show that they contain a greater number of native-like structures than the original databases, thereby producing a more rigorous database for testing scoring functions.

  12. Synovial folds in equine articular process joints

    DEFF Research Database (Denmark)

    Thomsen, Line Nymann; Berg, Lise Charlotte; Markussen, Bo

    2013-01-01

    Cervical synovial folds have been suggested as a potential cause of neck pain in humans. Little is known about the extent and characteristics of cervical synovial folds in horses.......Cervical synovial folds have been suggested as a potential cause of neck pain in humans. Little is known about the extent and characteristics of cervical synovial folds in horses....

  13. Semi-automatic logarithmic converter of logs

    International Nuclear Information System (INIS)

    Gol'dman, Z.A.; Bondar's, V.V.

    1974-01-01

    Semi-automatic logarithmic converter of logging charts. An original semi-automatic converter was developed for use in converting BK resistance logging charts and the time interval, ΔT, of acoustic logs from a linear to a logarithmic scale with a specific ratio for subsequent combining of them with neutron-gamma logging charts in operative interpretation of logging materials by a normalization method. The converter can be used to increase productivity by giving curves different from those obtained in manual, pointwise processing. The equipment operates reliably and is simple in use. (author)

  14. A Universal Logging System for LHCb Online

    International Nuclear Information System (INIS)

    Nikolaidis, Fotis; Brarda, Loic; Garnier, Jean-Christophe; Neufeld, Niko

    2011-01-01

    A log is recording of system's activity, aimed to help system administrator to traceback an attack, find the causes of a malfunction and generally with troubleshooting. The fact that logs are the only information an administrator may have for an incident, makes logging system a crucial part of an IT infrastructure. In large scale infrastructures, such as LHCb Online, where quite a few GB of logs are produced daily, it is impossible for a human to review all of these logs. Moreover, a great percentage of them as just n oise . That makes clear that a more automated and sophisticated approach is needed. In this paper, we present a low-cost centralized logging system which allow us to do in-depth analysis of every log.

  15. Impact of hydrodynamic interactions on protein folding rates depends on temperature

    Science.gov (United States)

    Zegarra, Fabio C.; Homouz, Dirar; Eliaz, Yossi; Gasic, Andrei G.; Cheung, Margaret S.

    2018-03-01

    We investigated the impact of hydrodynamic interactions (HI) on protein folding using a coarse-grained model. The extent of the impact of hydrodynamic interactions, whether it accelerates, retards, or has no effect on protein folding, has been controversial. Together with a theoretical framework of the energy landscape theory (ELT) for protein folding that describes the dynamics of the collective motion with a single reaction coordinate across a folding barrier, we compared the kinetic effects of HI on the folding rates of two protein models that use a chain of single beads with distinctive topologies: a 64-residue α /β chymotrypsin inhibitor 2 (CI2) protein, and a 57-residue β -barrel α -spectrin Src-homology 3 domain (SH3) protein. When comparing the protein folding kinetics simulated with Brownian dynamics in the presence of HI to that in the absence of HI, we find that the effect of HI on protein folding appears to have a "crossover" behavior about the folding temperature. This means that at a temperature greater than the folding temperature, the enhanced friction from the hydrodynamic solvents between the beads in an unfolded configuration results in lowered folding rate; conversely, at a temperature lower than the folding temperature, HI accelerates folding by the backflow of solvent toward the folded configuration of a protein. Additionally, the extent of acceleration depends on the topology of a protein: for a protein like CI2, where its folding nucleus is rather diffuse in a transition state, HI channels the formation of contacts by favoring a major folding pathway in a complex free energy landscape, thus accelerating folding. For a protein like SH3, where its folding nucleus is already specific and less diffuse, HI matters less at a temperature lower than the folding temperature. Our findings provide further theoretical insight to protein folding kinetic experiments and simulations.

  16. A neutron well logging system

    International Nuclear Information System (INIS)

    1980-01-01

    A pulsed neutron well logging system using a sealed off neutron generator tube is provided with a programmable digital neutron output control system. The control system monitors the target beam current and compares a function of this current with a pre-programmed control function to develop a control signal for the neutron generator. The control signal is used in a series regulator to control the average replenisher current of the neutron generator tube. The programmable digital control system of the invention also provides digital control signals as a function of time to provide ion source voltages. This arrangement may be utilized to control neutron pulses durations and repetition rates or to produce other modulated wave forms for intensity modulating the output of the neutron generator as a function of time. (Auth.)

  17. Decomposable log-linear models

    DEFF Research Database (Denmark)

    Eriksen, Poul Svante

    can be characterized by a structured set of conditional independencies between some variables given some other variables. We term the new model class decomposable log-linear models, which is illustrated to be a much richer class than decomposable graphical models.It covers a wide range of non...... The present paper considers discrete probability models with exact computational properties. In relation to contingency tables this means closed form expressions of the maksimum likelihood estimate and its distribution. The model class includes what is known as decomposable graphicalmodels, which......-hierarchical models, models with structural zeroes, models described by quasi independence and models for level merging. Also, they have a very natural interpretation as they may be formulated by a structured set of conditional independencies between two events given some other event. In relation to contingency...

  18. Well logging, atom and geology

    International Nuclear Information System (INIS)

    Serra, O.

    1994-01-01

    Well logging techniques exploit interactions of gamma photons and neutrons with atoms. Interactions of neutrons of different energies with atoms allow the detection and evaluation of the weight percentage of several elements composing the rocks (C, O, Si, Ca, Fe, S); spectrometry of gamma rays produced by thermal neutron absorption allows for the weight percentage determination of Si, Ca, Fe, S, Cl, H, Ti and Gd, etc. High resolution detectors (germanium doped by Li, at liquid nitrogen temperature) allow the recognition of more elements. Other techniques involving neutrons consist in determining the population in epithermal neutrons at a certain distance of the neutron source (measurement of the hydrogen index). By analyzing the intensity of the gamma flux produced by Compton scattering, the electronic and bulk densities of the rocks are measured. All these data lead to the detection and evaluation of ore deposits (uranium and potassium) and coal, and determination of the lithology, the main minerals composing the rocks, petrophysical properties... 1 fig

  19. Understanding ensemble protein folding at atomic detail

    International Nuclear Information System (INIS)

    Wallin, Stefan; Shakhnovich, Eugene I

    2008-01-01

    Although far from routine, simulating the folding of specific short protein chains on the computer, at a detailed atomic level, is starting to become a reality. This remarkable progress, which has been made over the last decade or so, allows a fundamental aspect of the protein folding process to be addressed, namely its statistical nature. In order to make quantitative comparisons with experimental kinetic data a complete ensemble view of folding must be achieved, with key observables averaged over the large number of microscopically different folding trajectories available to a protein chain. Here we review recent advances in atomic-level protein folding simulations and the new insight provided by them into the protein folding process. An important element in understanding ensemble folding kinetics are methods for analyzing many separate folding trajectories, and we discuss techniques developed to condense the large amount of information contained in an ensemble of trajectories into a manageable picture of the folding process. (topical review)

  20. Geomicrobial Optical Logging Detectors (GOLD)

    Science.gov (United States)

    Bramall, N. E.; Stoker, C. R.; Price, P. B.; Coates, J. D.; Allamandola, L. J.; Mattioda, A. L.

    2008-12-01

    We will present concepts for downhole instrumentation that could be used in the Deep Underground Science and Engineering Laboratory (DUSEL). We envision optical borehole-logging instruments that could monitor bacterial concentration, mineralogy, aromatic organics, temperature and oxygen concentration, allowing for the in situ monitoring of time-dependent microbial and short-scale geologic processes and provide valuable in situ data on stratigraphy to supplement core analyses, especially where instances of missing or damaged core sections make such studies difficult. Incorporated into these instruments will be a sampling/inoculation tool to allow for the recovery and/or manipulation of particularly interesting sections of the borehole wall for further study, enabling a series of microbiological studies. The borehole tools we will develop revolve around key emerging technologies and methods, some of which are briefly described below: 1) Autofluorescence Spectroscopy: Building on past instruments, we will develop a new borehole logger that searches for microbial life and organics using fluorescence spectroscopy. Many important organic compounds (e.g. PAHs) and biomolecules (e.g. aromatic amino acids, proteins, methanogenic coenzymes) fluoresce when excited with ultraviolet and visible light. Through the careful selection of excitation wavelength(s) and temporal gating parameters, a borehole logging instrument can detect and differentiate between these different compounds and the mineral matrix in which they exist. 2) Raman Spectroscopy: Though less sensitive than fluorescence spectroscopy, Raman spectroscopy is more definitive: it can provide important mineral phase distribution/proportions and other chemical data enabling studies of mineralogy and microbe-mineral interactions (when combined with fluorescence). 3) Borehole Camera: Imaging of the borehole wall with extended information in the UV, visible, and NIR for a more informative view can provide a lot of insight

  1. Protein folding and wring resonances

    DEFF Research Database (Denmark)

    Bohr, Jakob; Bohr, Henrik; Brunak, Søren

    1997-01-01

    The polypeptide chain of a protein is shown to obey topological contraints which enable long range excitations in the form of wring modes of the protein backbone. Wring modes of proteins of specific lengths can therefore resonate with molecular modes present in the cell. It is suggested that prot......The polypeptide chain of a protein is shown to obey topological contraints which enable long range excitations in the form of wring modes of the protein backbone. Wring modes of proteins of specific lengths can therefore resonate with molecular modes present in the cell. It is suggested...... that protein folding takes place when the amplitude of a wring excitation becomes so large that it is energetically favorable to bend the protein backbone. The condition under which such structural transformations can occur is found, and it is shown that both cold and hot denaturation (the unfolding...

  2. California-Nevada uranium logging. Final report

    International Nuclear Information System (INIS)

    1981-04-01

    The purpose of this project was to obtain geophysical logs of industry drill holes to assess the uranium resource potential of geologic formations of interest. The work was part of the US Department of Energy's National Uranium Resource Evaluation (NURE) Program. The principal objective of the logging program was to determine radioelement grade of formations through natural gamma ray detectors. Supplementary information was obtained from resistivity (R), self-potential (SP), point resistance (RE), and neutron density (NN) logs for formation interpretation. Additional data for log interpretation was obtained from caliper logs, casing schedules, and downhole temperature. This data was obtained from well operators when available, with new logs obtained where not formerly available. This report contains a summary of the project and data obtained to date

  3. The Arterial Folding Point During Flexion of the Hip Joint

    International Nuclear Information System (INIS)

    Park, Sung Il; Won, Je Hwan; Kim, Byung Moon; Kim, Jae Keun; Lee, Do Yun

    2005-01-01

    Purpose: Endovascular stents placed in periarticular vessels may be at a greater risk of neointimal hyperplasia and eventual occlusion than those placed in non-periarticular vessels. The purpose of this study was to investigate the location of maximal conformational change along the iliac and femoral artery, the folding point, during flexion of the hip joint and its location relative to the hip joint and the inguinal ligament. Methods: Seventy patients undergoing femoral artery catheterization were evaluated. The patients were 47 men and 23 women and ranged in age from 26 to 75 years (mean 54 years). The arteries (right:left = 34:36) were measured using a marked catheter for sizing vessels. Fluoroscopic images were obtained in anteroposterior and lateral projections in neutral position, and in the lateral projection in flexed position of the hip joint. The folding point was determined by comparing the lateral projection images in the neutral and flexed positions. The distance from the acetabular roof to the folding point and the distance from the inguinal ligament to the folding point was evaluated. Results: : The folding point was located 42.8 ± 28.6 mm cranial to the acetabular roof and 35.1 ± 30.1 mm cranial to the inguinal ligament. As the patient’s age increased, the folding point was located more cranially (p < 0.001). Conclusions: The folding point during flexion of the hip joint was located 42.8 ± 28.6 mm cranial to the acetabular roof and 35.1 ± 30.1 mm cranial to the inguinal ligament. As the patient's age increased, the folding point was located more cranially. When a stent is inserted over this region, more attention may be needed during follow-up to monitor possible occlusion and stent failure.

  4. Pembangkitan Data dari Distribusi Log-logistik

    Directory of Open Access Journals (Sweden)

    Aceng Komarudin Mutaqin

    2014-11-01

    Full Text Available Distribusi log-logistik merupakan salah satu distribusi yang dapat diaplikasikan untuk data mutu lingkungan. Makalah ini membahas pembangkitan data dari distribusi log-logistik mulai dari pembangunan algoritme sampai pembuatan program komputer pada perangkat lunak MATLAB. Metode pembangkitan datanya menggunakan metode inverse transform. Ada dua jenis data yang dibangkitkan, yaitu data lengkap dan data tersensor kiri. Dalam makalah ini diberikan contoh data yang dibangkitkan dari distribusi log-logistik.

  5. A Multi-temporal Analysis of Logging Impacts on Tropical Forest Structure Using Airborne Lidar Data

    Science.gov (United States)

    Keller, M. M.; Pinagé, E. R.; Duffy, P.; Longo, M.; dos-Santos, M. N.; Leitold, V.; Morton, D. C.

    2017-12-01

    The long-term impacts of selective logging on carbon cycling and ecosystem function in tropical-forests are still uncertain. Despite improvements in selective logging detection using satellite data, quantifying changes in forest structure from logging and recovery following logging is difficult using orbital data. We analyzed the dynamics of forest structure comparing logged and unlogged forests in the Eastern Brazilian Amazon (Paragominas Municipality, Pará State) using small footprint discrete return airborne lidar data acquired in 2012 and 2014. Logging operations were conducted at the 1200 ha study site from 2006 through 2013 using reduced impact logging techniques—management practices that minimize canopy and ground damage compared to more common conventional logging. Nevertheless, logging still reduced aboveground biomass by 10% to 20% in logged areas compared to intact forests. We aggregated lidar point-cloud data at spatial scales ranging from 50 m to 250 m and developed a binomial classification model based on the height distribution of lidar returns in 2012 and validated the model against the 2014 lidar acquisition. We accurately classified intact and logged forest classes compared with field data. Classification performance improved as spatial resolution increased (AUC = 0.974 at 250 m). We analyzed the differences in canopy gaps, understory damage (based on a relative density model), and biomass (estimated from total canopy height) of intact and logged classes. As expected, logging greatly increased both canopy gap formation and understory damage. However, while the area identified as canopy gap persisted for at least 8 years (from the oldest logging treatments in 2006 to the most recent lidar acquisition in 2014), the effects of ground damage were mostly erased by vigorous understory regrowth after about 5 years. The rate of new gap formation was 6 to 7 times greater in recently logged forests compared to undisturbed forests. New gaps opened at a

  6. SNG-logs at the Bagsvaerd Lake

    International Nuclear Information System (INIS)

    Korsbech, U.

    1992-11-01

    Spectral Natural Gamma-logs (SNG) were taken in old boreholes around Bagsvaerd Lake (Zealand). The purpose of this investigation was to clarify the geologic/lithologic conditions in this region and the potential risks of waste penetration into ground water. Relationship curves for thorium, uranium and potassium concentrations are given. Some special logs which can be useful for evaluating concentration variations or transition forms among various lithological layers are collected. Appendices contain technical information on the boreholes and discussion of differences between results of SNG-logging and the conventional gamma-logging. (EG)

  7. 32 CFR 700.846 - Status of logs.

    Science.gov (United States)

    2010-07-01

    ... Officers Afloat § 700.846 Status of logs. The deck log, the engineering log, the compass record, the bearing hooks, the engineer's bell book, and any records generated by automated data logging equipment...

  8. Dynamics of Folds in the Plane

    Science.gov (United States)

    Krylov, Nikolai A.; Rogers, Edwin L.

    2011-01-01

    Take a strip of paper and fold a crease intersecting the long edges, creating two angles. Choose one edge and consider the angle with the crease. Fold the opposite edge along the crease, creating a new crease that bisects the angle. Fold again, this time using the newly created crease and the initial edge, creating a new angle along the chosen…

  9. Influence of borehole-eccentred tools on wireline and logging-while-drilling sonic logging measurements

    KAUST Repository

    Pardo, David; Matuszyk, Paweł Jerzy; Torres-Verdí n, Carlos; Mora Cordova, Angel; Muga, Ignacio; Calo, Victor M.

    2013-01-01

    We describe a numerical study to quantify the influence of tool-eccentricity on wireline (WL) and logging-while-drilling (LWD) sonic logging measurements. Simulations are performed with a height-polynomial-adaptive (hp) Fourier finite-element method

  10. Log canonical thresholds of smooth Fano threefolds

    International Nuclear Information System (INIS)

    Cheltsov, Ivan A; Shramov, Konstantin A

    2008-01-01

    The complex singularity exponent is a local invariant of a holomorphic function determined by the integrability of fractional powers of the function. The log canonical thresholds of effective Q-divisors on normal algebraic varieties are algebraic counterparts of complex singularity exponents. For a Fano variety, these invariants have global analogues. In the former case, it is the so-called α-invariant of Tian; in the latter case, it is the global log canonical threshold of the Fano variety, which is the infimum of log canonical thresholds of all effective Q-divisors numerically equivalent to the anticanonical divisor. An appendix to this paper contains a proof that the global log canonical threshold of a smooth Fano variety coincides with its α-invariant of Tian. The purpose of the paper is to compute the global log canonical thresholds of smooth Fano threefolds (altogether, there are 105 deformation families of such threefolds). The global log canonical thresholds are computed for every smooth threefold in 64 deformation families, and the global log canonical thresholds are computed for a general threefold in 20 deformation families. Some bounds for the global log canonical thresholds are computed for 14 deformation families. Appendix A is due to J.-P. Demailly.

  11. Aggregation of log-linear risks

    DEFF Research Database (Denmark)

    Embrechts, Paul; Hashorva, Enkeleijd; Mikosch, Thomas Valentin

    2014-01-01

    In this paper we work in the framework of a k-dimensional vector of log-linear risks. Under weak conditions on the marginal tails and the dependence structure of a vector of positive risks, we derive the asymptotic tail behaviour of the aggregated risk {and present} an application concerning log...

  12. Synthetic rope applications in Appalachian logging

    Science.gov (United States)

    Ben D. Spong; Jingxin Wang

    2008-01-01

    New ultra-high molecular weight polyethylene rope has shown good results as a replacement for wire rope in logging applications in the western United States. A single case study trial was performed in Appalachian forest conditions to assess the appropriateness of this technology for hardwood logging applications. The study focused on use of the rope in West Virginia...

  13. Palm distributions for log Gaussian Cox processes

    DEFF Research Database (Denmark)

    Coeurjolly, Jean-Francois; Møller, Jesper; Waagepetersen, Rasmus

    This paper reviews useful results related to Palm distributions of spatial point processes and provides a new result regarding the characterization of Palm distributions for the class of log Gaussian Cox processes. This result is used to study functional summary statistics for a log Gaussian Cox...

  14. Log-binomial models: exploring failed convergence.

    Science.gov (United States)

    Williamson, Tyler; Eliasziw, Misha; Fick, Gordon Hilton

    2013-12-13

    Relative risk is a summary metric that is commonly used in epidemiological investigations. Increasingly, epidemiologists are using log-binomial models to study the impact of a set of predictor variables on a single binary outcome, as they naturally offer relative risks. However, standard statistical software may report failed convergence when attempting to fit log-binomial models in certain settings. The methods that have been proposed in the literature for dealing with failed convergence use approximate solutions to avoid the issue. This research looks directly at the log-likelihood function for the simplest log-binomial model where failed convergence has been observed, a model with a single linear predictor with three levels. The possible causes of failed convergence are explored and potential solutions are presented for some cases. Among the principal causes is a failure of the fitting algorithm to converge despite the log-likelihood function having a single finite maximum. Despite these limitations, log-binomial models are a viable option for epidemiologists wishing to describe the relationship between a set of predictors and a binary outcome where relative risk is the desired summary measure. Epidemiologists are encouraged to continue to use log-binomial models and advocate for improvements to the fitting algorithms to promote the widespread use of log-binomial models.

  15. LHCb Online Log Analysis and Maintenance System

    CERN Document Server

    Garnier, J-C

    2011-01-01

    History has shown, many times computer logs are the only information an administrator may have for an incident, which could be caused either by a malfunction or an attack. Due to the huge amount of logs that are produced from large-scale IT infrastructures, such as LHCb Online, critical information may be overlooked or simply be drowned in a sea of other messages. This clearly demonstrates the need for an automatic system for long-term maintenance and real time analysis of the logs. We have constructed a low cost, fault tolerant centralized logging system which is able to do in-depth analysis and cross-correlation of every log. This system is capable of handling O(10000) different log sources and numerous formats, while trying to keep the overhead as low as possible. It provides log gathering and management, Offline analysis and online analysis. We call Offline analysis the procedure of analyzing old logs for critical information, while Online analysis refer to the procedure of early alerting and reacting. ...

  16. The nuclear magnetic resonance well logging

    International Nuclear Information System (INIS)

    Zhang Yumin; Shen Huitang

    2003-01-01

    In this paper, the characteristic of the nuclear magnetic resonance logging is described at first. Then its development and its principle is presented. Compared with the nuclear magnetic resonance spectrometer, the magnet techniques is the first question that we must solve in the manufacture of the NMR well logging

  17. A semantic perspective on query log analysis

    NARCIS (Netherlands)

    Hofmann, K.; de Rijke, M.; Huurnink, B.; Meij, E.

    2009-01-01

    We present our views on the CLEF log file analysis task. We argue for a task definition that focuses on the semantic enrichment of query logs. In addition, we discuss how additional information about the context in which queries are being made could further our understanding of users’ information

  18. Utilization and cost for animal logging operations

    Science.gov (United States)

    Suraj P. Shrestha; Bobby L. Lanford

    2001-01-01

    Forest harvesting with animals is a labor-intensive operation. Due to the development of efficient machines and high volume demands from the forest products industry, mechanization of logging developed very fast, leaving behind the traditional horse and mule logging. It is expensive to use machines on smaller woodlots, which require frequent moves if mechanically...

  19. Data logging system upgrade for Indus accelerator

    International Nuclear Information System (INIS)

    Mishra, R.; Merh, B.N.; Agrawal, R.K.; Fatnani, P.; Navathe, C.P.; Pal, S.

    2012-01-01

    An accelerator has various subsystems like Magnet Power Supply, Beam Diagnostics and Vacuum etc. which are required to work in a stable manner to ensure required machine performance. Logging of system parameters at a faster rate plays a crucial role in analysing and understanding machine behaviour. Logging all the machine parameters consistently at the rate of typically more than 1 Hz has been the aim of a recent data logging system upgrade. Nearly ten thousand parameters are being logged at varying intervals of one second to one minute in Indus accelerator complex. The present logging scheme is augmented to log all these parameters at a rate equal to or more than 1 Hz. The database schema is designed according to the data type of the parameter. The data is distributed into historical table and intermediate table which comprises of recent data. Machine control applications read the parameter values from the control system and store them into the text files of finite time duration for each sub-system. The logging application of each sub-system passes these text files to database for bulk insertion. The detail design of database, logging scheme and its architecture is presented in the paper. (author)

  20. Impacts of extended working hours in logging

    Science.gov (United States)

    Dana Mitchell; Tom Gallagher

    2008-01-01

    Last year at the 2007 AIM in Minneapolis, MN, the authors presented the human factors impacts to consider when implementing extended working hours in the logging industry. In a continuation of this project, we have researched existing literature to identify possible actions that logging business owners can take to reduce the impact of extended working hours on their...

  1. Neutron logging reliability techniques and apparatus

    International Nuclear Information System (INIS)

    Johnstone, C.W.

    1978-01-01

    This invention relates in general to neutron logging of earth formations, and in particular, to novel apparatus and procedures for determining the validity, or reliability, of data derived at least in part by logging neutron characteristics of earth formations and, if desired, for affording verifiably accurate indications of such data

  2. Neutron logging reliability techniques and apparatus

    International Nuclear Information System (INIS)

    Johnstone, C.W.

    1974-01-01

    This invention relates in general to neutron logging of earth formations, and in particular, to novel apparatus and procedures for determining the validity, or reliability, of data derived at least in part by logging neutron characteristics of earth formations and, if desired, for affording verifiably accurate indications of such data. (author)

  3. Logging methods and peeling of Aspen

    Science.gov (United States)

    T. Schantz-Hansen

    1948-01-01

    The logging of forest products is influenced by many factors, including the size of the trees, density of the stand, the soundness of the trees, size of the area logged, topography and soil, weather conditions, the degree of utilization, the skill of the logger and the equipment used, the distance from market, etc. Each of these factors influences not only the method...

  4. Log Analysis Using Splunk Hadoop Connect

    Science.gov (United States)

    2017-06-01

    23 A. INPUT SELECTION ...Conversion Resource Consumption .............................................. 28 Figure 8. Distribution of Events in Years...running a logging service puts a performance tax on the system and may cause the degradation of performance. More thorough 8 logging will cause a

  5. Grading sugar pine saw logs in trees.

    Science.gov (United States)

    John W. Henley

    1972-01-01

    Small limbs and small overgrown limbs cause problems when grading saw logs in sugar pine trees. Surface characteristics and lumber recovery information for 426 logs from 64 sugar pine trees were examined. Resulting modifications in the grading specification that allow a grader to ignore small limbs and small limb indicators do not appear to decrease the performance of...

  6. Log-ratio circuit for beam position monitoring

    International Nuclear Information System (INIS)

    Wells, F.D.; Shafer, R.E.; Gilpatrick, J.D.; Shurter, R.B.

    1990-01-01

    A synopsis is given of work in progress on a new signal processing technique for obtaining real-time normalized beam position information from sensing electrodes in accelerator beam pipes. The circuit employs wideband logarithmic amplifiers in a configuration that converts pickup electrode signals to position signals that are substantially independent of beam current. The circuit functions as a ratio detector that computes the logarithm of (A/B) as (Log A-Log B), and presents the result in a video (real-time analog) format representing beam position. It has potential benefits of greater dynamic range and better linearity than other techniques currently used and it may be able to operate at substantially higher frequencies. 4 refs., 8 figs

  7. Analysis of RIA standard curve by log-logistic and cubic log-logit models

    International Nuclear Information System (INIS)

    Yamada, Hideo; Kuroda, Akira; Yatabe, Tami; Inaba, Taeko; Chiba, Kazuo

    1981-01-01

    In order to improve goodness-of-fit in RIA standard analysis, programs for computing log-logistic and cubic log-logit were written in BASIC using personal computer P-6060 (Olivetti). Iterative least square method of Taylor series was applied for non-linear estimation of logistic and log-logistic. Hear ''log-logistic'' represents Y = (a - d)/(1 + (log(X)/c)sup(b)) + d As weights either 1, 1/var(Y) or 1/σ 2 were used in logistic or log-logistic and either Y 2 (1 - Y) 2 , Y 2 (1 - Y) 2 /var(Y), or Y 2 (1 - Y) 2 /σ 2 were used in quadratic or cubic log-logit. The term var(Y) represents squares of pure error and σ 2 represents estimated variance calculated using a following equation log(σ 2 + 1) = log(A) + J log(y). As indicators for goodness-of-fit, MSL/S sub(e)sup(2), CMD% and WRV (see text) were used. Better regression was obtained in case of alpha-fetoprotein by log-logistic than by logistic. Cortisol standard curve was much better fitted with cubic log-logit than quadratic log-logit. Predicted precision of AFP standard curve was below 5% in log-logistic in stead of 8% in logistic analysis. Predicted precision obtained using cubic log-logit was about five times lower than that with quadratic log-logit. Importance of selecting good models in RIA data processing was stressed in conjunction with intrinsic precision of radioimmunoassay system indicated by predicted precision. (author)

  8. Model wells for nuclear well logging

    International Nuclear Information System (INIS)

    Tittle, C.W.

    1989-01-01

    Considerations needed in the design and construction of model wells for nuclear log calibration are covered, with special attention to neutron porosity logging and total γ-ray logging. Pulsed neutron decay-time and spectral γ-ray logging are discussed briefly. The American Petroleum Institute calibration facility for nuclear logs is a good starting point for similar or expanded facilities. A few of its shortcomings are mentioned; they are minor. The problem of fluid saturation is emphasized. Attention is given to models made of consolidated rock and those containing unconsolidated material such as Ottawa sand. Needed precautions are listed. A similarity method is presented for estimating the porosity index of formations that are not fully saturated. (author)

  9. Processing of gamma-ray spectrometric logs

    International Nuclear Information System (INIS)

    Umiastowski, K.; Dumesnil, P.

    1984-10-01

    CEA (Commissariat a l'Energie Atomique) has developped a gamma-ray spectrometric tool, containing an analog-to-digital converter. This new tool permits to perform very precise uranium logs (natural gamma-ray spectrometry), neutron activation logs and litho-density logs (gamma-gamma spectrometric logs). Specific processing methods were developped to treate the particular problems of down-hole gamma-ray spectrometry. Extraction of the characteristic gamma-ray peak, even if they are superposed on the background radiation of very high intensity, is possible. This processing methode enables also to obtain geological informations contained in the continuous background of the spectrum. Computer programs are written in high level language for SIRIUS (VICTOR) and APOLLO computers. Exemples of uranium and neutron activation logs treatment are presented [fr

  10. Anatomy and Histology of an Epicanthal Fold.

    Science.gov (United States)

    Park, Jae Woo; Hwang, Kun

    2016-06-01

    The aim of this study is to elucidate the precise anatomical and histological detail of the epicanthal fold.Thirty-two hemifaces of 16 Korean adult cadavers were used in this study (30 hemifaces with an epicanthal fold, 2 without an epicanthal fold). In 2 patients who had an epicanthoplasty, the epicanthal folds were sampled.In a dissection, the periorbital skin and subcutaneous tissues were removed and the epicanthal fold was observed in relation to each part of the orbicularis oculi muscle. Specimens including the epicanthal fold were embeddedin in paraffin, sectioned at 10 um, and stained with Hematoxylin-Eosin. The horizontal section in the level of the paplebral fissure was made and the prepared slides were observed under a light microscope.In the specimens without an epicanthal fold, no connection between the upper preseptal muscle and the lower preseptal muscle was found. In the specimens with an epicanthal fold, a connection of the upper preseptal muscle to the lower preseptal muscle was observed. It was present in all 15 hemifaces (100%). There was no connection between the pretarsal muscles. In a horizontal section, the epicanthal fold was composed of 3 compartments: an outer skin lining, a core structure, and an innerskin lining. The core structure was mainly composed of muscular fibers and fibrotic tissue and they were intermingled.Surgeons should be aware of the anatomical details of an epicanthal fold. In removing or reconstructing an epicanthal fold, the fibromuscular core band should also be removed or reconstructed.

  11. Bilateral Vocal Fold Medialization: A Treatment for Abductor Spasmodic Dysphonia.

    Science.gov (United States)

    Dewan, Karuna; Berke, Gerald S

    2017-11-10

    Abductor spasmodic dysphonia, a difficult-to-treat laryngologic condition, is characterized by spasms causing the vocal folds to remain abducted despite efforts to adduct them during phonation. Traditional treatment for abductor spasmodic dysphonia-botulinum toxin injection into the posterior cricoarytenoid muscle-can be both technically challenging and uncomfortable. Due to the difficulty of needle placement, it is often unsuccessful. The purpose of this investigation is to present a previously undescribed treatment for abductor spasmodic dysphonia-bilateral vocal fold medialization. A retrospective case review of all cases of abductor spasmodic dysphonia treated in a tertiary care laryngology practice with bilateral vocal fold medialization over a 10-year period was performed. The Voice Handicap Index and the Voice-Related Quality of Life surveys were utilized to assess patient satisfaction with voice outcome. Six patients with abductor spasmodic dysphonia treated with bilateral vocal fold medialization were identified. Disease severity ranged from mild to severe. All six patients reported statistically significant improvement in nearly all Voice Handicap Index and Voice-Related Quality of Life parameters. They reported fewer voice breaks and greater ease of communication. Results were noted immediately and symptoms continue to be well controlled for many years following medialization. Bilateral vocal fold medialization is a safe and effective treatment for abductor spasmodic dysphonia. It is performed under local anesthesia and provides phonation improvement in the short and long term. Copyright © 2017 The Voice Foundation. Published by Elsevier Inc. All rights reserved.

  12. LOG2MARKUP: State module to transform a Stata text log into a markup document

    DEFF Research Database (Denmark)

    2016-01-01

    log2markup extract parts of the text version from the Stata log command and transform the logfile into a markup based document with the same name, but with extension markup (or otherwise specified in option extension) instead of log. The author usually uses markdown for writing documents. However...

  13. Processing well logging data, for example for verification and calibration of well logs

    International Nuclear Information System (INIS)

    Suau, J.; Boutemy, Y.

    1981-01-01

    A method is described of machine processing well logging data derived from borehole exploring devices which investigate earth formations traversed by boreholes. The method can be used for verifying and recalibrating logs, reconstructing missing logs and combining the data to form a statistical model of the traversed earth formations. (U.K.)

  14. [Autoerotic fatalities in Greater Dusseldorf].

    Science.gov (United States)

    Hartung, Benno; Hellen, Florence; Borchard, Nora; Huckenbeck, Wolfgang

    2011-01-01

    Autoerotic fatalities in the Greater Dusseldorf area correspond to the relevant medicolegal literature. Our results included exclusively young to middle-aged, usually single men who were found dead in their city apartments. Clothing and devices used showed a great variety. Women's or fetish clothing and complex shackling or hanging devices were disproportionately frequent. In most cases, death occurred due to hanging or ligature strangulation. There was no increased incidence of underlying psychiatric disorders. In most of the deceased no or at least no remarkable alcohol intoxication was found. Occasionally, it may be difficult to reliably differentiate autoerotic accidents, accidents occurring in connection with practices of bondage & discipline, dominance & submission (BDSM) from natural death, suicide or homicide.

  15. Planning for greater confinement disposal

    International Nuclear Information System (INIS)

    Gilbert, T.L.; Luner, C.; Meshkov, N.K.; Trevorrow, L.E.; Yu, C.

    1985-01-01

    A report that provides guidance for planning for greater-confinement disposal (GCD) of low-level radioactive waste is being prepared. The report addresses procedures for selecting a GCD technology and provides information for implementing these procedures. The focus is on GCD; planning aspects common to GCD and shallow-land burial are covered by reference. Planning procedure topics covered include regulatory requirements, waste characterization, benefit-cost-risk assessment and pathway analysis methodologies, determination of need, waste-acceptance criteria, performance objectives, and comparative assessment of attributes that support these objectives. The major technologies covered include augered shafts, deep trenches, engineered structures, hydrofracture, improved waste forms, and high-integrity containers. Descriptive information is provided, and attributes that are relevant for risk assessment and operational requirements are given. 10 refs., 3 figs., 2 tabs

  16. Asymmetric hindwing foldings in rove beetles.

    Science.gov (United States)

    Saito, Kazuya; Yamamoto, Shuhei; Maruyama, Munetoshi; Okabe, Yoji

    2014-11-18

    Foldable wings of insects are the ultimate deployable structures and have attracted the interest of aerospace engineering scientists as well as entomologists. Rove beetles are known to fold their wings in the most sophisticated ways that have right-left asymmetric patterns. However, the specific folding process and the reason for this asymmetry remain unclear. This study reveals how these asymmetric patterns emerge as a result of the folding process of rove beetles. A high-speed camera was used to reveal the details of the wing-folding movement. The results show that these characteristic asymmetrical patterns emerge as a result of simultaneous folding of overlapped wings. The revealed folding mechanisms can achieve not only highly compact wing storage but also immediate deployment. In addition, the right and left crease patterns are interchangeable, and thus each wing internalizes two crease patterns and can be folded in two different ways. This two-way folding gives freedom of choice for the folding direction to a rove beetle. The use of asymmetric patterns and the capability of two-way folding are unique features not found in artificial structures. These features have great potential to extend the design possibilities for all deployable structures, from space structures to articles of daily use.

  17. Kinetic partitioning mechanism of HDV ribozyme folding

    Energy Technology Data Exchange (ETDEWEB)

    Chen, Jiawen; Gong, Sha; Wang, Yujie; Zhang, Wenbing, E-mail: wbzhang@whu.edu.cn [Department of Physics, Wuhan University, Wuhan, Hubei 430072 (China)

    2014-01-14

    RNA folding kinetics is directly tied to RNA biological functions. We introduce here a new approach for predicting the folding kinetics of RNA secondary structure with pseudoknots. This approach is based on our previous established helix-based method for predicting the folding kinetics of RNA secondary structure. In this approach, the transition rates for an elementary step: (1) formation, (2) disruption of a helix stem, and (3) helix formation with concomitant partial melting of an incompatible helix, are calculated with the free energy landscape. The folding kinetics of the Hepatitis delta virus (HDV) ribozyme and the mutated sequences are studied with this method. The folding pathways are identified by recursive searching the states with high net flux-in(out) population starting from the native state. The theory results are in good agreement with that of the experiments. The results indicate that the bi-phasic folding kinetics for the wt HDV sequence is ascribed to the kinetic partitioning mechanism: Part of the population will quickly fold to the native state along the fast pathway, while another part of the population will fold along the slow pathway, in which the population is trapped in a non-native state. Single mutation not only changes the folding rate but also the folding pathway.

  18. Vocal Fold Vibratory Changes Following Surgical Intervention.

    Science.gov (United States)

    Chen, Wenli; Woo, Peak; Murry, Thomas

    2016-03-01

    High-speed videoendoscopy (HSV) captures direct cycle-to-cycle visualization of vocal fold movement in real time. This ultrafast recording rate is capable of visualizing the vibratory motion of the vocal folds in severely disordered phonation and provides a direct method for examining vibratory changes after vocal fold surgery. The purpose of this study was to examine the vibratory motion before and after surgical intervention. HSV was captured from two subjects with identifiable midvocal fold benign lesions and six subjects with highly aperiodic vocal fold vibration before and after phonosurgery. Digital kymography (DKG) was used to extract high-speed kymographic vocal fold images sampled at the midmembranous, anterior 1/3, and posterior 1/3 region. Spectral analysis was subsequently applied to the DKG to quantify the cycle-to-cycle movements of the left and the right vocal fold, expressed as a spectrum. Before intervention, the vibratory spectrum consisted of decreased and flat-like spectral peaks with robust power asymmetry. After intervention, increases in spectral power and decreases in power symmetry were noted. Spectral power increases were most remarkable in the midmembranous region of the vocal fold. Surgical modification resulted in improved lateral excursion of the vocal folds, vibratory function, and perceptual measures of Voice Handicap Index-10. These changes in vibratory behavior trended toward normal vocal fold vibration. Copyright © 2016 The Voice Foundation. Published by Elsevier Inc. All rights reserved.

  19. Did you smooth your well logs the right way for seismic interpretation?

    International Nuclear Information System (INIS)

    Duchesne, Mathieu J; Gaillot, Philippe

    2011-01-01

    Correlations between physical properties and seismic reflection data are useful to determine the geological nature of seismic reflections and the lateral extent of geological strata. The difference in resolution between well logs and seismic data is a major hurdle faced by seismic interpreters when tying both data sets. In general, log data have a resolution of at least two orders of magnitude greater than seismic data. Smoothing physical property logs improves correlation at the seismic scale. Three different approaches were used and compared to smooth a density log: binomial filtering, seismic wavelet filtering and discrete wavelet transform (DWT) filtering. Regression plots between the density logs and the acoustic impedance show that the data smoothed with the DWT is the only method that preserves the original relationship between the raw density data and the acoustic impedance. Smoothed logs were then used to generate synthetic seismograms that were tied to seismic data at the borehole site. Best ties were achieved using the synthetic seismogram computed with the density log processed with the DWT. The good performance of the DWT is explained by its adaptive multi-scale characteristic which preserved significant local changes of density on the high-resolution data series that were also pictured at the seismic scale. Since synthetic seismograms are generated using smoothed logs, the choice of the smoothing method impacts on the quality of seismic-to-well ties. This ultimately can have economical implications during hydrocarbon exploration or exploitation phases

  20. The impact of tropical forest logging and oil palm agriculture on the soil microbiome.

    Science.gov (United States)

    Tripathi, Binu M; Edwards, David P; Mendes, Lucas William; Kim, Mincheol; Dong, Ke; Kim, Hyoki; Adams, Jonathan M

    2016-05-01

    Selective logging and forest conversion to oil palm agriculture are rapidly altering tropical forests. However, functional responses of the soil microbiome to these land-use changes are poorly understood. Using 16S rRNA gene and shotgun metagenomic sequencing, we compared composition and functional attributes of soil biota between unlogged, once-logged and twice-logged rainforest, and areas converted to oil palm plantations in Sabah, Borneo. Although there was no significant effect of logging history, we found a significant difference between the taxonomic and functional composition of both primary and logged forests and oil palm. Oil palm had greater abundances of genes associated with DNA, RNA, protein metabolism and other core metabolic functions, but conversely, lower abundance of genes associated with secondary metabolism and cell-cell interactions, indicating less importance of antagonism or mutualism in the more oligotrophic oil palm environment. Overall, these results show a striking difference in taxonomic composition and functional gene diversity of soil microorganisms between oil palm and forest, but no significant difference between primary forest and forest areas with differing logging history. This reinforces the view that logged forest retains most features and functions of the original soil community. However, networks based on strong correlations between taxonomy and functions showed that network complexity is unexpectedly increased due to both logging and oil palm agriculture, which suggests a pervasive effect of both land-use changes on the interaction of soil microbes. © 2016 John Wiley & Sons Ltd.

  1. Logística del transporte

    OpenAIRE

    Robusté Antón, Francesc

    2005-01-01

    La logística se ha conformado como un proceso estratégico para organizar las actividades de producción y de distribución de las empresas. El concepto de sistema logístico ha incluido un amplio espectro de operaciones que condicionan la eficiencia y la competitividad empresarial en el actual contexto de globalización de la economía. En este sentido, este libro afronta y analiza los distintos aspectos que inciden en los procesos de planificación y gestión de los procesos logísticos relacionados...

  2. Nonblocking and orphan free message logging protocols

    Science.gov (United States)

    Alvisi, Lorenzo; Hoppe, Bruce; Marzullo, Keith

    1992-12-01

    Currently existing message logging protocols demonstrate a classic pessimistic vs. optimistic tradeoff. We show that the optimistic-pessimistic tradeoff is not inherent to the problem of message logging. We construct a message-logging protocol that has the positive features of both optimistic and pessimistic protocol: our protocol prevents orphans and allows simple failure recovery; however, it requires no blocking in failure-free runs. Furthermore, this protocol does not introduce any additional message overhead as compared to one implemented for a system in which messages may be lost but processes do not crash.

  3. Supply of Rubber Wood Log in Malaysia

    OpenAIRE

    Noraida, A. W.; Abdul-Rahim, A. S.

    2014-01-01

    Issue on shortage of raw material for wood processing solved by discovery of rubber wood log as one of the substitutes the natural log. This paper examines the supply of rubber wood log in Malaysia. We employ ARDL Bound Approach Test and time series data from 1980 to 2010 which represented the whole Malaysia are used to achieve the established objectives. The result shown, in the long run harvested area and wages have 1% and 10% significant level respectively. While in the short run, there wa...

  4. Adaptive Origami for Efficiently Folded Structures

    Science.gov (United States)

    2016-02-01

    heating. Although a large fold angle at a high temperature is desirable in order to extrapolate the origami geometry toward closure, more emphasis is...AFRL-RQ-WP-TR-2016-0020 ADAPTIVE ORIGAMI FOR EFFICIENTLY FOLDED STRUCTURES James J. Joo and Greg Reich Design and Analysis Branch... ORIGAMI FOR EFFICIENTLY FOLDED STRUCTURES 5a. CONTRACT NUMBER In-house 5b. GRANT NUMBER 5c. PROGRAM ELEMENT NUMBER 61102F 6. AUTHOR(S) James J

  5. Vocal fold paralysis secondary to phonotrauma.

    Science.gov (United States)

    Klein, Travis A L; Gaziano, Joy E; Ridley, Marion B

    2014-01-01

    A unique case of acute onset vocal fold paralysis secondary to phonotrauma is presented. The cause was forceful vocalization by a drill instructor on a firearm range. Imaging studies revealed extensive intralaryngeal and retropharyngeal hemorrhage. Laryngoscopy showed a complete left vocal fold paralysis. Relative voice rest was recommended, and the patient regained normal vocal fold mobility and function after approximately 12 weeks. Copyright © 2014 The Voice Foundation. All rights reserved.

  6. Waste management in Greater Vancouver

    Energy Technology Data Exchange (ETDEWEB)

    Carrusca, K. [Greater Vancouver Regional District, Burnaby, BC (Canada); Richter, R. [Montenay Inc., Vancouver, BC (Canada)]|[Veolia Environmental Services, Vancouver, BC (Canada)

    2006-07-01

    An outline of the Greater Vancouver Regional District (GVRD) waste-to-energy program was presented. The GVRD has an annual budget for solid waste management of $90 million. Energy recovery revenues from solid waste currently exceed $10 million. Over 1,660,00 tonnes of GVRD waste is recycled, and another 280,000 tonnes is converted from waste to energy. The GVRD waste-to-energy facility combines state-of-the-art combustion and air pollution control, and has processed over 5 million tonnes of municipal solid waste since it opened in 1988. Its central location minimizes haul distance, and it was originally sited to utilize steam through sales to a recycle paper mill. The facility has won several awards, including the Solid Waste Association of North America award for best facility in 1990. The facility focuses on continual improvement, and has installed a carbon injection system; an ammonia injection system; a flyash stabilization system; and heat capacity upgrades in addition to conducting continuous waste composition studies. Continuous air emissions monitoring is also conducted at the plant, which produces a very small percentage of the total air emissions in metropolitan Vancouver. The GVRD is now seeking options for the management of a further 500,000 tonnes per year of solid waste, and has received 23 submissions from a range of waste energy technologies which are now being evaluated. It was concluded that waste-to-energy plants can be located in densely populated metropolitan areas and provide a local disposal solution as well as a source of renewable energy. Other GVRD waste reduction policies were also reviewed. refs., tabs., figs.

  7. Spherical images and inextensible curved folding

    Science.gov (United States)

    Seffen, Keith A.

    2018-02-01

    In their study, Duncan and Duncan [Proc. R. Soc. London A 383, 191 (1982), 10.1098/rspa.1982.0126] calculate the shape of an inextensible surface folded in two about a general curve. They find the analytical relationships between pairs of generators linked across the fold curve, the shape of the original path, and the fold angle variation along it. They present two special cases of generator layouts for which the fold angle is uniform or the folded curve remains planar, for simplifying practical folding in sheet-metal processes. We verify their special cases by a graphical treatment according to a method of Gauss. We replace the fold curve by a piecewise linear path, which connects vertices of intersecting pairs of hinge lines. Inspired by the d-cone analysis by Farmer and Calladine [Int. J. Mech. Sci. 47, 509 (2005), 10.1016/j.ijmecsci.2005.02.013], we construct the spherical images for developable folding of successive vertices: the operating conditions of the special cases in Duncan and Duncan are then revealed straightforwardly by the geometric relationships between the images. Our approach may be used to synthesize folding patterns for novel deployable and shape-changing surfaces without need of complex calculation.

  8. Quantification of Porcine Vocal Fold Geometry.

    Science.gov (United States)

    Stevens, Kimberly A; Thomson, Scott L; Jetté, Marie E; Thibeault, Susan L

    2016-07-01

    The aim of this study was to quantify porcine vocal fold medial surface geometry and three-dimensional geometric distortion induced by freezing the larynx, especially in the region of the vocal folds. The medial surface geometries of five excised porcine larynges were quantified and reported. Five porcine larynges were imaged in a micro-CT scanner, frozen, and rescanned. Segmentations and three-dimensional reconstructions were used to quantify and characterize geometric features. Comparisons were made with geometry data previously obtained using canine and human vocal folds as well as geometries of selected synthetic vocal fold models. Freezing induced an overall expansion of approximately 5% in the transverse plane and comparable levels of nonuniform distortion in sagittal and coronal planes. The medial surface of the porcine vocal folds was found to compare reasonably well with other geometries, although the compared geometries exhibited a notable discrepancy with one set of published human female vocal fold geometry. Porcine vocal folds are qualitatively geometrically similar to data available for canine and human vocal folds, as well as commonly used models. Freezing of tissue in the larynx causes distortion of around 5%. The data can provide direction in estimating uncertainty due to bulk distortion of tissue caused by freezing, as well as quantitative geometric data that can be directly used in developing vocal fold models. Copyright © 2016 The Voice Foundation. Published by Elsevier Inc. All rights reserved.

  9. Fracture zones constrained by neutral surfaces in a fault-related fold: Insights from the Kelasu tectonic zone, Kuqa Depression

    Science.gov (United States)

    Sun, Shuai; Hou, Guiting; Zheng, Chunfang

    2017-11-01

    Stress variation associated with folding is one of the controlling factors in the development of tectonic fractures, however, little attention has been paid to the influence of neutral surfaces during folding on fracture distribution in a fault-related fold. In this study, we take the Cretaceous Bashijiqike Formation in the Kuqa Depression as an example and analyze the distribution of tectonic fractures in fault-related folds by core observation and logging data analysis. Three fracture zones are identified in a fault-related fold: a tensile zone, a transition zone and a compressive zone, which may be constrained by two neutral surfaces of fold. Well correlation reveals that the tensile zone and the transition zone reach the maximum thickness at the fold hinge and get thinner in the fold limbs. A 2D viscoelastic stress field model of a fault-related fold was constructed to further investigate the mechanism of fracturing. Statistical and numerical analysis reveal that the tensile zone and the transition zone become thicker with decreasing interlimb angle. Stress variation associated with folding is the first level of control over the general pattern of fracture distribution while faulting is a secondary control over the development of local fractures in a fault-related fold.

  10. Drilling and logging in uranium exploration

    International Nuclear Information System (INIS)

    Anon.

    1976-01-01

    The report reviews drilling and logging practices in exploration of uranium ores and summarizes the papers presented in the panel meeting. Recommendations for further research and development are given

  11. Neutron logging reliability techniques and apparatus

    International Nuclear Information System (INIS)

    Johnstone, C.W.

    1975-01-01

    Apparatus and methods for verifying the validity of data derived at least in part by neutron logging of earth formations, and, where indicated, for affording neutron diffusion-corrected values of such data, are disclosed. (WHK)

  12. Nuclear log interpretation by first principle

    International Nuclear Information System (INIS)

    Oelgaard, P.L.

    1988-07-01

    A weakness connected to the present interpretation of nuclear borehole logs is that the interdependence of the various logs and physical effects of importance for the tools are not always taken into account in a correct way. Therefore a new approach to the interpretation of nuclear borehole logs is considered. It is based on the logs obtained with the natural gamma, the neutron porosity, the gamma density, and the pulsed neutron tools. For each of these tools a model, taking into account the important physical effects, is established. These models are incorporated into a computer programme which from the tool signals calculates, by use of iteration, a consistent set of the corresponding formation properties. In the paper the models developed for the four tools and the interpretation programme are briefly described. An example of the use of the interpretation programme is given and compared with a conventional interpretation. (author)

  13. CMLOG: A common message logging system

    International Nuclear Information System (INIS)

    Chen, J.; Akers, W.; Bickley, M.; Wu, D.; Watson, W. III

    1997-01-01

    The Common Message Logging (CMLOG) system is an object-oriented and distributed system that not only allows applications and systems to log data (messages) of any type into a centralized database but also lets applications view incoming messages in real-time or retrieve stored data from the database according to selection rules. It consists of a concurrent Unix server that handles incoming logging or searching messages, a Motif browser that can view incoming messages in real-time or display stored data in the database, a client daemon that buffers and sends logging messages to the server, and libraries that can be used by applications to send data to or retrieve data from the database via the server. This paper presents the design and implementation of the CMLOG system meanwhile it will also address the issue of integration of CMLOG into existing control systems. CMLOG into existing control systems

  14. LATTE - Log and Time Tracking for Elections

    Data.gov (United States)

    Office of Personnel Management — LATTE - Log and Time Tracking for Elections is a time tracking and voucher preparation system used to schedule employees to cover elections, to document their time...

  15. Well Logging Equipment Updated in China

    Institute of Scientific and Technical Information of China (English)

    Xu Lili

    1996-01-01

    @@ As one of the ten principal disciplines in the petroleum industry, well logging has been developed for about 55years in China and is playing an increasingly important role in the country's oil and gas exploration and development.

  16. Bird species and traits associated with logged and unlogged forest in Borneo.

    Science.gov (United States)

    Cleary, Daniel F R; Boyle, Timothy J B; Setyawati, Titiek; Anggraeni, Celina D; Van Loon, E Emiel; Menken, Steph B J

    2007-06-01

    The ecological consequences of logging have been and remain a focus of considerable debate. In this study, we assessed bird species composition within a logging concession in Central Kalimantan, Indonesian Borneo. Within the study area (approximately 196 km2) a total of 9747 individuals of 177 bird species were recorded. Our goal was to identify associations between species traits and environmental variables. This can help us to understand the causes of disturbance and predict whether species with given traits will persist under changing environmental conditions. Logging, slope position, and a number of habitat structure variables including canopy cover and liana abundance were significantly related to variation in bird composition. In addition to environmental variables, spatial variables also explained a significant amount of variation. However, environmental variables, particularly in relation to logging, were of greater importance in structuring variation in composition. Environmental change following logging appeared to have a pronounced effect on the feeding guild and size class structure but there was little evidence of an effect on restricted range or threatened species although certain threatened species were adversely affected. For example, species such as the terrestrial insectivore Argusianus argus and the hornbill Buceros rhinoceros, both of which are threatened, were rare or absent in recently logged forest. In contrast, undergrowth insectivores such as Orthotomus atrogularis and Trichastoma rostratum were abundant in recently logged forest and rare in unlogged forest. Logging appeared to have the strongest negative effect on hornbills, terrestrial insectivores, and canopy bark-gleaning insectivores while moderately affecting canopy foliage-gleaning insectivores and frugivores, raptors, and large species in general. In contrast, undergrowth insectivores responded positively to logging while most understory guilds showed little pronounced effect

  17. Modulating Phonation Through Alteration of Vocal Fold Medial Surface Contour

    Science.gov (United States)

    Mau, Ted; Muhlestein, Joseph; Callahan, Sean; Chan, Roger W.

    2012-01-01

    Objectives 1. To test whether alteration of the vocal fold medial surface contour can improve phonation. 2. To demonstrate that implant material properties affect vibration even when implant is deep to the vocal fold lamina propria. Study Design Induced phonation of excised human larynges. Methods Thirteen larynges were harvested within 24 hours post-mortem. Phonation threshold pressure (PTP) and flow (PTF) were measured before and after vocal fold injections using either calcium hydroxylapatite (CaHA) or hyaluronic acid (HA). Small-volume injections (median 0.0625 mL) were targeted to the infero-medial aspect of the thyroarytenoid (TA) muscle. Implant locations were assessed histologically. Results The effect of implantation on PTP was material-dependent. CaHA tended to increase PTP, whereas HA tended to decrease PTP (Wilcoxon test P = 0.00013 for onset). In contrast, the effect of implantation on PTF was similar, with both materials tending to decrease PTF (P = 0.16 for onset). Histology confirmed implant presence in the inferior half of the vocal fold vertical thickness. Conclusions Taken together, these data suggested the implants may have altered the vocal fold medial surface contour, potentially resulting in a less convergent or more rectangular glottal geometry as a means to improve phonation. An implant with a closer viscoelastic match to vocal fold cover is desirable for this purpose, as material properties can affect vibration even when the implant is not placed within the lamina propria. This result is consistent with theoretical predictions and implies greater need for surgical precision in implant placement and care in material selection. PMID:22865592

  18. Log-Normality and Multifractal Analysis of Flame Surface Statistics

    Science.gov (United States)

    Saha, Abhishek; Chaudhuri, Swetaprovo; Law, Chung K.

    2013-11-01

    The turbulent flame surface is typically highly wrinkled and folded at a multitude of scales controlled by various flame properties. It is useful if the information contained in this complex geometry can be projected onto a simpler regular geometry for the use of spectral, wavelet or multifractal analyses. Here we investigate local flame surface statistics of turbulent flame expanding under constant pressure. First the statistics of local length ratio is experimentally obtained from high-speed Mie scattering images. For spherically expanding flame, length ratio on the measurement plane, at predefined equiangular sectors is defined as the ratio of the actual flame length to the length of a circular-arc of radius equal to the average radius of the flame. Assuming isotropic distribution of such flame segments we convolute suitable forms of the length-ratio probability distribution functions (pdfs) to arrive at corresponding area-ratio pdfs. Both the pdfs are found to be near log-normally distributed and shows self-similar behavior with increasing radius. Near log-normality and rather intermittent behavior of the flame-length ratio suggests similarity with dissipation rate quantities which stimulates multifractal analysis. Currently at Indian Institute of Science, India.

  19. Conversation Threads Hidden within Email Server Logs

    Science.gov (United States)

    Palus, Sebastian; Kazienko, Przemysław

    Email server logs contain records of all email Exchange through this server. Often we would like to analyze those emails not separately but in conversation thread, especially when we need to analyze social network extracted from those email logs. Unfortunately each mail is in different record and those record are not tided to each other in any obvious way. In this paper method for discussion threads extraction was proposed together with experiments on two different data sets - Enron and WrUT..

  20. Nuclear borehole logging for oil exploration

    International Nuclear Information System (INIS)

    Oelgaard, P.L.

    1989-01-01

    Reactor physics can be applied to the logging of boreholes for the exploration of oil and gas and the results obtained can be interpreted more correctly by use of reactor physics models, e.g. one-dimensional multi-group diffusion theory adapted for gamma quanta. The standard nuclear logging tools are: natural gamma, gamma density, neutron porosity and the pulsed-neutron tool. The models and interpretation procedures are discussed. 1 fig

  1. Geophysical logging of the Harwell boreholes

    International Nuclear Information System (INIS)

    Brightman, M.A.

    1983-08-01

    A comprehensive geophysical borehole logging survey was carried out on each of three deep boreholes drilled at the Harwell research site. KOALA and PETRA computer programs were used to analyse and interpret the logs to obtain continuous quantitative estimates of the geological and hydrogeological properties of the sequences penetrated at the Harwell site. Quantitative estimates of the mineral composition and porosity of the cores samples were made. (UK)

  2. Defect core detection in radiata pine logs

    International Nuclear Information System (INIS)

    Wallace, G.

    1993-01-01

    Internal defect cores in Pinus radiata logs arise primarily from the practice in New Zealand of pruning trees to increase the amount of clear wood. Realising the benefits of this practice when milling the logs is hampered by the lack of a practical method for detecting the defect cores. This report attempts to establish industry requirements for detections and examine techniques which may be suitable. Some trials of a novel technique are described. (author) 19 refs.; 11 figs

  3. A Generally Applicable Computer Algorithm Based on the Group Additivity Method for the Calculation of Seven Molecular Descriptors: Heat of Combustion, LogPO/W, LogS, Refractivity, Polarizability, Toxicity and LogBB of Organic Compounds; Scope and Limits of Applicability

    Directory of Open Access Journals (Sweden)

    Rudolf Naef

    2015-10-01

    Full Text Available A generally applicable computer algorithm for the calculation of the seven molecular descriptors heat of combustion, logPoctanol/water, logS (water solubility, molar refractivity, molecular polarizability, aqueous toxicity (protozoan growth inhibition and logBB (log (cblood/cbrain is presented. The method, an extendable form of the group-additivity method, is based on the complete break-down of the molecules into their constituting atoms and their immediate neighbourhood. The contribution of the resulting atom groups to the descriptor values is calculated using the Gauss-Seidel fitting method, based on experimental data gathered from literature. The plausibility of the method was tested for each descriptor by means of a k-fold cross-validation procedure demonstrating good to excellent predictive power for the former six descriptors and low reliability of logBB predictions. The goodness of fit (Q2 and the standard deviation of the 10-fold cross-validation calculation was >0.9999 and 25.2 kJ/mol, respectively, (based on N = 1965 test compounds for the heat of combustion, 0.9451 and 0.51 (N = 2640 for logP, 0.8838 and 0.74 (N = 1419 for logS, 0.9987 and 0.74 (N = 4045 for the molar refractivity, 0.9897 and 0.77 (N = 308 for the molecular polarizability, 0.8404 and 0.42 (N = 810 for the toxicity and 0.4709 and 0.53 (N = 383 for logBB. The latter descriptor revealing a very low Q2 for the test molecules (R2 was 0.7068 and standard deviation 0.38 for N = 413 training molecules is included as an example to show the limits of the group-additivity method. An eighth molecular descriptor, the heat of formation, was indirectly calculated from the heat of combustion data and correlated with published experimental heat of formation data with a correlation coefficient R2 of 0.9974 (N = 2031.

  4. Modeling Precipitation Extremes using Log-Histospline

    Science.gov (United States)

    Huang, W. K.; Nychka, D. W.; Zhang, H.

    2017-12-01

    One of the commonly used approaches to modeling univariate extremes is the peaks-overthreshold (POT) method. The POT method models exceedances over a (sufficiently high/low) threshold as a generalized Pareto distribution (GPD). To apply this method, a threshold has to be chosen and the estimates might be sensitive to the chosen threshold. Here we propose an alternative, the "Log-Histospline", to explore modeling the tail behavior and the remainder of the density in one step using the full range of the data. Log-Histospline applies a smoothing spline model on a finely binned histogram of the log transformed data to estimate its log density. By construction, we are able to preserve the polynomial upper tail behavior, a feature commonly observed in geophysical observations. The Log-Histospline can be extended to the spatial setting by treating the marginal (log) density at each location as spatially indexed functional data, and perform a dimension reduction and spatial smoothing. We illustrate the proposed method by analyzing precipitation data from regional climate model output (North American Regional Climate Change and Assessment Program (NARCCAP)).

  5. Guiding the folding pathway of DNA origami.

    Science.gov (United States)

    Dunn, Katherine E; Dannenberg, Frits; Ouldridge, Thomas E; Kwiatkowska, Marta; Turberfield, Andrew J; Bath, Jonathan

    2015-09-03

    DNA origami is a robust assembly technique that folds a single-stranded DNA template into a target structure by annealing it with hundreds of short 'staple' strands. Its guiding design principle is that the target structure is the single most stable configuration. The folding transition is cooperative and, as in the case of proteins, is governed by information encoded in the polymer sequence. A typical origami folds primarily into the desired shape, but misfolded structures can kinetically trap the system and reduce the yield. Although adjusting assembly conditions or following empirical design rules can improve yield, well-folded origami often need to be separated from misfolded structures. The problem could in principle be avoided if assembly pathway and kinetics were fully understood and then rationally optimized. To this end, here we present a DNA origami system with the unusual property of being able to form a small set of distinguishable and well-folded shapes that represent discrete and approximately degenerate energy minima in a vast folding landscape, thus allowing us to probe the assembly process. The obtained high yield of well-folded origami structures confirms the existence of efficient folding pathways, while the shape distribution provides information about individual trajectories through the folding landscape. We find that, similarly to protein folding, the assembly of DNA origami is highly cooperative; that reversible bond formation is important in recovering from transient misfoldings; and that the early formation of long-range connections can very effectively enforce particular folds. We use these insights to inform the design of the system so as to steer assembly towards desired structures. Expanding the rational design process to include the assembly pathway should thus enable more reproducible synthesis, particularly when targeting more complex structures. We anticipate that this expansion will be essential if DNA origami is to continue its

  6. Single injection of basic fibroblast growth factor to treat severe vocal fold lesions and vocal fold paralysis.

    Science.gov (United States)

    Kanazawa, Takeharu; Komazawa, Daigo; Indo, Kanako; Akagi, Yusuke; Lee, Yogaku; Nakamura, Kazuhiro; Matsushima, Koji; Kunieda, Chikako; Misawa, Kiyoshi; Nishino, Hiroshi; Watanabe, Yusuke

    2015-10-01

    Severe vocal fold lesions such as vocal fold sulcus, scars, and atrophy induce a communication disorder due to severe hoarseness, but a treatment has not been established. Basic fibroblast growth factor (bFGF) therapies by either four-time repeated local injections or regenerative surgery for vocal fold scar and sulcus have previously been reported, and favorable outcomes have been observed. In this study, we modified bFGF therapy using a single of bFGF injection, which may potentially be used in office procedures. Retrospective chart review. Five cases of vocal fold sulcus, six cases of scars, seven cases of paralysis, and 17 cases of atrophy were treated by a local injection of bFGF. The injection regimen involved injecting 50 µg of bFGF dissolved in 0.5 mL saline only once into the superficial lamina propria using a 23-gauge injection needle. Two months to 3 months after the injection, phonological outcomes were evaluated. The maximum phonation time (MPT), mean airflow rate, pitch range, speech fundamental frequency, jitter, and voice handicap index improved significantly after the bFGF injection. Furthermore, improvement in the MPT was significantly greater in patients with (in increasing order) vocal fold atrophy, scar, and paralysis. The improvement in the MPT among all patients was significantly correlated with age; the MPT improved more greatly in younger patients. Regenerative treatments by bFGF injection—even a single injection—effectively improve vocal function in vocal fold lesions. 4 © 2015 The American Laryngological, Rhinological and Otological Society, Inc.

  7. Periodic and stochastic thermal modulation of protein folding kinetics.

    Science.gov (United States)

    Platkov, Max; Gruebele, Martin

    2014-07-21

    Chemical reactions are usually observed either by relaxation of a bulk sample after applying a sudden external perturbation, or by intrinsic fluctuations of a few molecules. Here we show that the two ideas can be combined to measure protein folding kinetics, either by periodic thermal modulation, or by creating artificial thermal noise that greatly exceeds natural thermal fluctuations. We study the folding reaction of the enzyme phosphoglycerate kinase driven by periodic temperature waveforms. As the temperature waveform unfolds and refolds the protein, its fluorescence color changes due to FRET (Förster resonant Energy Transfer) of two donor/acceptor fluorophores labeling the protein. We adapt a simple model of periodically driven kinetics that nicely fits the data at all temperatures and driving frequencies: The phase shifts of the periodic donor and acceptor fluorescence signals as a function of driving frequency reveal reaction rates. We also drive the reaction with stochastic temperature waveforms that produce thermal fluctuations much greater than natural fluctuations in the bulk. Such artificial thermal noise allows the recovery of weak underlying signals due to protein folding kinetics. This opens up the possibility for future detection of a stochastic resonance for protein folding subject to noise with controllable amplitude.

  8. Approaching climate-adaptive facades with foldings

    DEFF Research Database (Denmark)

    Sack-Nielsen, Torsten

    2014-01-01

    envelopes based on folding principles such as origami. Three major aspects cover the project’s interest in this topic: Shape, kinetics and the application of new multi-functional materials form the interdisciplinary framework of this research. Shape// Initially small paper sketch models demonstrate folding...

  9. Monadic Maps and Folds for Arbitrary Datatypes

    NARCIS (Netherlands)

    Fokkinga, M.M.

    Each datatype constructor comes equiped not only with a so-called map and fold (catamorphism), as is widely known, but, under some condition, also with a kind of map and fold that are related to an arbitrary given monad. This result follows from the preservation of initiality under lifting

  10. Fold and Fit: Space Conserving Shape Editing

    KAUST Repository

    Ibrahim, Mohamed; Yan, Dong-Ming

    2017-01-01

    We present a framework that folds man-made objects in a structure-aware manner for space-conserving storage and transportation. Given a segmented 3D mesh of a man-made object, our framework jointly optimizes for joint locations, the folding order

  11. Merging monads and folds for functional programming

    NARCIS (Netherlands)

    Meijer, E.; Jeuring, J.T.

    1995-01-01

    These notes discuss the simultaneous use of generalised fold operators and monads to structure functional programs. Generalised fold operators structure programs after the decomposition of the value they consume. Monads structure programs after the computation of the value they produce. Our programs

  12. Theoretical study of the folded waveguide

    International Nuclear Information System (INIS)

    Chen, G.L.; Owens, T.L.; Whealton, J.H.

    1988-01-01

    We have applied a three-dimensional (3-D) algorithm for solving Maxwell's equations to the analysis of foleded waveguides used for fusion plasma heating at the ion cyclotron resonance frequency. A rigorous analysis of the magnetic field structure in the folded waveguide is presented. The results are compared to experimenntal measurements. Optimum conditions for the folded waveguide are discussed. 6 refs., 10 figs

  13. Experimental investigation into the mechanism of folding

    NARCIS (Netherlands)

    Kuenen, Ph.H.; Sitter, de L.U.

    1938-01-01

    The investigation of geological structures due to folding led de Sitter to form an opinion on the mechanical problems involved (Bibl. 7). His principal contention is that in simple cases the relative movements of particles with respect to eachother during deformation leading to a fold, have been

  14. A comparison of RNA folding measures

    Directory of Open Access Journals (Sweden)

    Gardner Paul P

    2005-10-01

    Full Text Available Abstract Background In the last few decades there has been a great deal of discussion concerning whether or not noncoding RNA sequences (ncRNAs fold in a more well-defined manner than random sequences. In this paper, we investigate several existing measures for how well an RNA sequence folds, and compare the behaviour of these measures over a large range of Rfam ncRNA families. Such measures can be useful in, for example, identifying novel ncRNAs, and indicating the presence of alternate RNA foldings. Results Our analysis shows that ncRNAs, but not mRNAs, in general have lower minimal free energy (MFE than random sequences with the same dinucleotide frequency. Moreover, even when the MFE is significant, many ncRNAs appear to not have a unique fold, but rather several alternative folds, at least when folded in silico. Furthermore, we find that the six investigated measures are correlated to varying degrees. Conclusion Due to the correlations between the different measures we find that it is sufficient to use only two of them in RNA folding studies, one to test if the sequence in question has lower energy than a random sequence with the same dinucleotide frequency (the Z-score and the other to see if the sequence has a unique fold (the average base-pair distance, D.

  15. Muscular anatomy of the human ventricular folds.

    Science.gov (United States)

    Moon, Jerald; Alipour, Fariborz

    2013-09-01

    Our purpose in this study was to better understand the muscular anatomy of the ventricular folds in order to help improve biomechanical modeling of phonation and to better understand the role of these muscles during phonatory and nonphonatory tasks. Four human larynges were decalcified, sectioned coronally from posterior to anterior by a CryoJane tape transfer system, and stained with Masson's trichrome. The total and relative areas of muscles observed in each section were calculated and used for characterizing the muscle distribution within the ventricular folds. The ventricular folds contained anteriorly coursing thyroarytenoid and ventricularis muscle fibers that were in the lower half of the ventricular fold posteriorly, and some ventricularis muscle was evident in the upper and lateral portions of the fold more anteriorly. Very little muscle tissue was observed in the medial half of the fold, and the anterior half of the ventricular fold was largely devoid of any muscle tissue. All 4 larynges contained muscle bundles that coursed superiorly and medially through the upper half of the fold, toward the lateral margin of the epiglottis. Although variability of expression was evident, a well-defined thyroarytenoid muscle was readily apparent lateral to the arytenoid cartilage in all specimens.

  16. Graph-representation of oxidative folding pathways

    Directory of Open Access Journals (Sweden)

    Kaján László

    2005-01-01

    Full Text Available Abstract Background The process of oxidative folding combines the formation of native disulfide bond with conformational folding resulting in the native three-dimensional fold. Oxidative folding pathways can be described in terms of disulfide intermediate species (DIS which can also be isolated and characterized. Each DIS corresponds to a family of folding states (conformations that the given DIS can adopt in three dimensions. Results The oxidative folding space can be represented as a network of DIS states interconnected by disulfide interchange reactions that can either create/abolish or rearrange disulfide bridges. We propose a simple 3D representation wherein the states having the same number of disulfide bridges are placed on separate planes. In this representation, the shuffling transitions are within the planes, and the redox edges connect adjacent planes. In a number of experimentally studied cases (bovine pancreatic trypsin inhibitor, insulin-like growth factor and epidermal growth factor, the observed intermediates appear as part of contiguous oxidative folding pathways. Conclusions Such networks can be used to visualize folding pathways in terms of the experimentally observed intermediates. A simple visualization template written for the Tulip package http://www.tulip-software.org/ can be obtained from V.A.

  17. Pre-logging Treatment of Invasive Glossy Buckthorn (Frangula alnus Mill. Promotes Regeneration of Eastern White Pine (Pinus strobus L.

    Directory of Open Access Journals (Sweden)

    Thomas D. Lee

    2016-12-01

    Full Text Available Non-native glossy buckthorn (Frangula alnus Mill. is invasive in forests of the northeastern USA but little is known of its effects on tree regeneration. We tested whether killing buckthorn stems before logging reduces its post-logging abundance and increases the density and height of eastern white pine (Pinus strobus L. seedlings. Three 0.4 ha plots were clearcut, three were thinned, and three were left as controls. Each plot had previously been divided into three subplots that received different buckthorn treatments during the two years before logging. Buckthorn treatments were (1 stems cut at base five times; (2 stems cut once then heat killed four times; (3 untreated control. Three years post-logging, buckthorn density and stem height were unaffected by logging but equally reduced by the two buckthorn treatments. Buckthorn reduction increased density and height of pine seedlings, and seedling height also increased with logging. In the fifth year post-logging, pine height growth and biomass were greater in clearcut than in thinned treatments, greater in areas of buckthorn removal and, within treated subplots, greater in areas with low buckthorn density than in thickets of recovering buckthorn. Thus, although buckthorn inhibited regenerating pine, pre-logging destruction of buckthorn stems reduced such competition for at least four years.

  18. Geometric U-folds in four dimensions

    Science.gov (United States)

    Lazaroiu, C. I.; Shahbazi, C. S.

    2018-01-01

    We describe a general construction of geometric U-folds compatible with a non-trivial extension of the global formulation of four-dimensional extended supergravity on a differentiable spin manifold. The topology of geometric U-folds depends on certain flat fiber bundles which encode how supergravity fields are globally glued together. We show that smooth non-trivial U-folds of this type can exist only in theories where both the scalar and space-time manifolds have non-trivial fundamental group and in addition the scalar map of the solution is homotopically non-trivial. Consistency with string theory requires smooth geometric U-folds to be glued using subgroups of the effective discrete U-duality group, implying that the fundamental group of the scalar manifold of such solutions must be a subgroup of the latter. We construct simple examples of geometric U-folds in a generalization of the axion-dilaton model of \

  19. Fold and Fit: Space Conserving Shape Editing

    KAUST Repository

    Ibrahim, Mohamed

    2017-09-01

    We present a framework that folds man-made objects in a structure-aware manner for space-conserving storage and transportation. Given a segmented 3D mesh of a man-made object, our framework jointly optimizes for joint locations, the folding order, and folding angles for each part of the model, enabling it to transform into a spatially efficient configuration while keeping its original functionality as intact as possible. That is, if a model is supposed to withstand several forces in its initial state to serve its functionality, our framework places the joints between the parts of the model such that the model can withstand forces with magnitudes that are comparable to the magnitudes applied on the unedited model. Furthermore, if the folded shape is not compact, our framework proposes further segmentation of the model to improve its compactness in its folded state.

  20. [Clinical analysis of vocal fold firbrous mass].

    Science.gov (United States)

    Chen, Hao; Sun, Jing Wu; Wan, Guang Lun; Hu, Yan Ming

    2018-03-01

    To explore the character of laryngoscopy finding, voice, and therapy of vocal fold fibrous mass. Clinical data, morphology, voice character, surgery and pathology of 15 cases with vocal fold fibrous mass were analyzed. The morbidity of vocal fold fibrous mass might be related to overuse of voice and laryngopharyngeal reflex. Laryngoscopy revealed shuttle line appearance, smoothness and decreased mucosal wave of vocal fold. These patients were invalid for voice training and might be improved by surgery, but recovery is slow. The morbidity of vocal fold fibrous mass might be related to overuse of voice and laryngopharyngeal reflex. Conservative treatment is ineffective for this disease, and surgery might improve. Copyright© by the Editorial Department of Journal of Clinical Otorhinolaryngology Head and Neck Surgery.

  1. Sarcoidosis Presenting as Bilateral Vocal Fold Immobility.

    Science.gov (United States)

    Hintze, Justin M; Gnagi, Sharon H; Lott, David G

    2018-05-01

    Bilateral true vocal fold paralysis is rarely attributable to inflammatory diseases. Sarcoidosis is a rare but important etiology of bilateral true vocal fold paralysis by compressive lymphadenopathy, granulomatous infiltration, and neural involvement. We describe the first reported case of sarcoidosis presenting as bilateral vocal fold immobility caused by direct fixation by granulomatous infiltration severe enough to necessitate tracheostomy insertion. In addition, we discuss the presentation, the pathophysiology, and the treatment of this disease with a review of the literature of previously reported cases of sarcoidosis-related vocal fold immobility. Sarcoidosis should therefore be an important consideration for the otolaryngologist's differential diagnosis of true vocal fold immobility. Copyright © 2018 The Voice Foundation. Published by Elsevier Inc. All rights reserved.

  2. Microvascular lesions of the true vocal fold.

    Science.gov (United States)

    Postma, G N; Courey, M S; Ossoff, R H

    1998-06-01

    Microvascular lesions, also called varices or capillary ectasias, in contrast to vocal fold polyps with telangiectatic vessels, are relatively small lesions arising from the microcirculation of the vocal fold. Varices are most commonly seen in female professional vocalists and may be secondary to repetitive trauma, hormonal variations, or repeated inflammation. Microvascular lesions may either be asymptomatic or cause frank dysphonia by interrupting the normal vibratory pattern, mass, or closure of the vocal folds. They may also lead to vocal fold hemorrhage, scarring, or polyp formation. Laryngovideostroboscopy is the key in determining the functional significance of vocal fold varices. Management of patients with a varix includes medical therapy, speech therapy, and occasionally surgical vaporization. Indications for surgery are recurrent hemorrhage, enlargement of the varix, development of a mass in conjunction with the varix or hemorrhage, and unacceptable dysphonia after maximal medical and speech therapy due to a functionally significant varix.

  3. La logística integral como ventaja competitiva y sistema logístico

    Directory of Open Access Journals (Sweden)

    Mario Anselmo Martínez gallardo

    2013-07-01

    Full Text Available Esta investigación analiza la logística integral como una ventaja competitiva y el sistema logístico. Es opinión de los autores que la logística integral es esencial para el intercambio de mercancías, toda vez que reduce costos y hace más ágil la actividad comercial. La utilización de esta logística representa una ventaja competitiva con respecto de otras empresas por la optimización del capital y ahorro de tiempo.

  4. Well logging with natural gamma radiation

    International Nuclear Information System (INIS)

    Ellis, D.V.

    1983-01-01

    An invention is described for use in natural gamma radiation well logging in which measurements taken in a borehole are used in the search for valuable underground resources such as oil or gas. The invention comprises deriving a log of natural gamma radiation detected in selected energy windows for a selected borehole depth interval and converting it into a log of the selected subsurface materials, e.g. Th, U, K. This log is corrected for the effects of 1) either a gamma ray emitter in the borehole fluid, e.g. potassium salts and/or 2) a gamma ray attenuator in the borehole fluid, e.g. a strong attenuator such as barite and/or hematite. The Th, U, K log is particularly useful in the exploration of oil and gas resources since the Th, U, K concentrations are a good indication as to the presence, type and volume of shale and clay in the formations surrounding the borehole. (U.K.)

  5. AML (Advanced Mud Logging: First Among Equals

    Directory of Open Access Journals (Sweden)

    T. Loermans

    2017-09-01

    Full Text Available During the past ten years an enormous development in mud logging technology has been made. Traditional mud logging was only qualitative in nature, and mudlogs could not be used for the petrophysical well evaluations which form the basis for all subsequent activities on wells and fields. AML however can provide quantitative information, logs with a reliability, trueness and precision like LWD and WLL. Hence for well evaluation programmes there are now three different logging methods available, each with its own pros and cons on specific aspects: AML, LWD and WLL. The largest improvements have been made in mud gas analysis and elemental analysis of cuttings. Mud gas analysis can yield hydrocarbon fluid composition for some components with a quality like PVT analysis, hence not only revolutionising the sampling programme so far done with only LWD/WLL, but also making it possible to geosteer on fluid properties. Elemental analysis of cuttings, e.g. with XRF, with an ability well beyond the capabilities of the spectroscopy measurements possible earlier with LWD/WLL tools, is opening up improved ways to evaluate formations, especially of course where the traditional methods are falling short of requirements, such as in unconventional reservoirs. An overview and specific examples of these AML logs is given, from which it may be concluded that AML now ought to be considered as “first among its equals”.

  6. Coarsely resolved topography along protein folding pathways

    Science.gov (United States)

    Fernández, Ariel; Kostov, Konstantin S.; Berry, R. Stephen

    2000-03-01

    The kinetic data from the coarse representation of polypeptide torsional dynamics described in the preceding paper [Fernandez and Berry, J. Chem. Phys. 112, 5212 (2000), preceding paper] is inverted by using detailed balance to obtain a topographic description of the potential-energy surface (PES) along the dominant folding pathway of the bovine pancreatic trypsin inhibitor (BPTI). The topography is represented as a sequence of minima and effective saddle points. The dominant folding pathway displays an overall monotonic decrease in energy with a large number of staircaselike steps, a clear signature of a good structure-seeker. The diversity and availability of alternative folding pathways is analyzed in terms of the Shannon entropy σ(t) associated with the time-dependent probability distribution over the kinetic ensemble of contact patterns. Several stages in the folding process are evident. Initially misfolded states form and dismantle revealing no definite pattern in the topography and exhibiting high Shannon entropy. Passage down a sequence of staircase steps then leads to the formation of a nativelike intermediate, for which σ(t) is much lower and fairly constant. Finally, the structure of the intermediate is refined to produce the native state of BPTI. We also examine how different levels of tolerance to mismatches of side chain contacts influence the folding kinetics, the topography of the dominant folding pathway, and the Shannon entropy. This analysis yields upper and lower bounds of the frustration tolerance required for the expeditious and robust folding of BPTI.

  7. Pulsed neutron logging - a modern approach to petroleum exploration

    International Nuclear Information System (INIS)

    Navalkar, M.P.

    1978-01-01

    As hydrocarbons have strikingly different properties for neutrons as compared with rocks, neutronic methods are useful to prepare logs of bore holes drilled for petroleum exploration. The earlier neutron logs were based on steady neutron sources, but the superior logs, namely, neutron life time log and neutron induced spectral log are based on pulsed neutron sources. The methods of obtaining these logs, their limitations and the field equipment required are described briefly. As the two logs are complementary, a plea has been made to develop field equipment which can obtain two logs in a single run. (M.G.B.)

  8. Reconciling the Log-Linear and Non-Log-Linear Nature of the TSH-Free T4 Relationship: Intra-Individual Analysis of a Large Population.

    Science.gov (United States)

    Rothacker, Karen M; Brown, Suzanne J; Hadlow, Narelle C; Wardrop, Robert; Walsh, John P

    2016-03-01

    The TSH-T4 relationship was thought to be inverse log-linear, but recent cross-sectional studies report a complex, nonlinear relationship; large, intra-individual studies are lacking. Our objective was to analyze the TSH-free T4 relationship within individuals. We analyzed data from 13 379 patients, each with six or more TSH/free T4 measurements and at least a 5-fold difference between individual median TSH and minimum or maximum TSH. Linear and nonlinear regression models of log TSH on free T4 were fitted to data from individuals and goodness of fit compared by likelihood ratio testing. Comparing all models, the linear model achieved best fit in 31% of individuals, followed by quartic (27%), cubic (15%), null (12%), and quadratic (11%) models. After eliminating least favored models (with individuals reassigned to best fitting, available models), the linear model fit best in 42% of participants, quartic in 43%, and null model in 15%. As the number of observations per individual increased, so did the proportion of individuals in whom the linear model achieved best fit, to 66% in those with more than 20 observations. When linear models were applied to all individuals and averaged according to individual median free T4 values, variations in slope and intercept indicated a nonlinear log TSH-free T4 relationship across the population. The log TSH-free T4 relationship appears linear in some individuals and nonlinear in others, but is predominantly linear in those with the largest number of observations. A log-linear relationship within individuals can be reconciled with a non-log-linear relationship in a population.

  9. Melody discrimination and protein fold classification

    Directory of Open Access Journals (Sweden)

    Robert P. Bywater

    2016-10-01

    Full Text Available One of the greatest challenges in theoretical biophysics and bioinformatics is the identification of protein folds from sequence data. This can be regarded as a pattern recognition problem. In this paper we report the use of a melody generation software where the inputs are derived from calculations of evolutionary information, secondary structure, flexibility, hydropathy and solvent accessibility from multiple sequence alignment data. The melodies so generated are derived from the sequence, and by inference, of the fold, in ways that give each fold a sound representation that may facilitate analysis, recognition, or comparison with other sequences.

  10. A bidirectional shape memory alloy folding actuator

    International Nuclear Information System (INIS)

    Paik, Jamie K; Wood, Robert J

    2012-01-01

    This paper presents a low-profile bidirectional folding actuator based on annealed shape memory alloy sheets applicable for meso- and microscale systems. Despite the advantages of shape memory alloys—high strain, silent operation, and mechanical simplicity—their application is often limited to unidirectional operation. We present a bidirectional folding actuator that produces two opposing 180° motions. A laser-patterned nickel alloy (Inconel 600) heater localizes actuation to the folding sections. The actuator has a thin ( < 1 mm) profile, making it appropriate for use in robotic origami. Various design parameters and fabrication variants are described and experimentally explored in the actuator prototype. (paper)

  11. Folded Plate Structures as Building Envelopes

    DEFF Research Database (Denmark)

    Falk, Andreas; Buelow, Peter von; Kirkegaard, Poul Henning

    2012-01-01

    This paper treats applications of cross-laminated timber (CLT) in structural systems for folded façade solutions. Previous work on CLT-based systems for folded roofs has shown a widening range of structural possibilities to develop timber-based shells. Geometric and material properties play...... CLT-based systems, which are studied and analysed by using a combination of digital tools for structural and environmental design and analysis. The results show gainful, rational properties of folded systems and beneficial effects from an integration of architectural and environmental performance...... criteria in the design of CLT-based façades....

  12. Mechanical Models of Fault-Related Folding

    Energy Technology Data Exchange (ETDEWEB)

    Johnson, A. M.

    2003-01-09

    The subject of the proposed research is fault-related folding and ground deformation. The results are relevant to oil-producing structures throughout the world, to understanding of damage that has been observed along and near earthquake ruptures, and to earthquake-producing structures in California and other tectonically-active areas. The objectives of the proposed research were to provide both a unified, mechanical infrastructure for studies of fault-related foldings and to present the results in computer programs that have graphical users interfaces (GUIs) so that structural geologists and geophysicists can model a wide variety of fault-related folds (FaRFs).

  13. Fracture diagnostics with tube wave reflection logs

    International Nuclear Information System (INIS)

    Medlin, W.L.

    1991-01-01

    This paper reports on the Tube Wave Reflection Log (TWRL) which is acoustic logging method which provides information about the height, location and conductivity of hydraulically induced fractures behind perforated casing. The TWRL tool consists of a transmitter and closely spaced receiver. The transmitter is driven with a short, low frequency tone burst to generate long wavelength tube waves which are little attenuated in unperforated casing. They are partially reflected when they pass perforated intervals communicating with a hydraulically induced fracture. The tool listens for such reflections for 0.1 seconds following each excitation burst. As the tool is moved uphole at logging speed, the transmitter is excited at each foot of depth. VDL displays of the TWRL records provide reflection traces whose projections define the uppermost and lower-most perforations communicating with the fracture. The strength of the reflections depends on the ease of fluid flow into the fracture and thus, is an indicator of fracture conductivity

  14. Smartphone log data in a qualitative perspective

    DEFF Research Database (Denmark)

    Ørmen, Jacob; Thorhauge, Anne Mette

    2015-01-01

    into studies of smartphones in everyday life. Through an illustrative study, we explore a more nuanced perspective on what can be considered “log data” and how these types of data can be collected and analysed. A qualitative approach to log data analysis offers researchers new opportunities to situate......Log data from smartphones have primarily been used in large-scale research designs to draw statistical inferences from hundreds or even thousands of participants. In this article, we argue that more qualitatively oriented designs can also benefit greatly from integrating these rich data sources...... serve as cues to instigate discussion and reflection as well as act as resources for contextualizing and organizing related empirical material. In the discussion, the advantages of a qualitative perspective for research designs are assessed in relation to issues of validity. Further perspectives...

  15. Singular and interactive effects of blowdown, salvage logging, and wildfire in sub-boreal pine systems

    Science.gov (United States)

    D'Amato, A.W.; Fraver, S.; Palik, B.J.; Bradford, J.B.; Patty, L.

    2011-01-01

    The role of disturbance in structuring vegetation is widely recognized; however, we are only beginning to understand the effects of multiple interacting disturbances on ecosystem recovery and development. Of particular interest is the impact of post-disturbance management interventions, particularly in light of the global controversy surrounding the effects of salvage logging on forest ecosystem recovery. Studies of salvage logging impacts have focused on the effects of post-disturbance salvage logging within the context of a single natural disturbance event. There have been no formal evaluations of how these effects may differ when followed in short sequence by a second, high severity natural disturbance. To evaluate the impact of this management practice within the context of multiple disturbances, we examined the structural and woody plant community responses of sub-boreal Pinus banksiana systems to a rapid sequence of disturbances. Specifically, we compared responses to Blowdown (B), Fire (F), Blowdown-Fire, and Blowdown-Salvage-Fire (BSF) and compared these to undisturbed control (C) stands. Comparisons between BF and BSF indicated that the primary effect of salvage logging was a decrease in the abundance of structural legacies, such as downed woody debris and snags. Both of these compound disturbance sequences (BF and BSF), resulted in similar woody plant communities, largely dominated by Populus tremuloides; however, there was greater homogeneity in community composition in salvage logged areas. Areas experiencing solely fire (F stands) were dominated by P. banksiana regeneration, and blowdown areas (B stands) were largely characterized by regeneration from shade tolerant conifer species. Our results suggest that salvage logging impacts on woody plant communities are diminished when followed by a second high severity disturbance; however, impacts on structural legacies persist. Provisions for the retention of snags, downed logs, and surviving trees as part

  16. Financial feasibility of a log sort yard handling small-diameter logs: A preliminary study

    Science.gov (United States)

    Han-Sup Han; E. M. (Ted) Bilek; John (Rusty) Dramm; Dan Loeffler; Dave Calkin

    2011-01-01

    The value and use of the trees removed in fuel reduction thinning and restoration treatments could be enhanced if the wood were effectively evaluated and sorted for quality and highest value before delivery to the next manufacturing destination. This article summarizes a preliminary financial feasibility analysis of a log sort yard that would serve as a log market to...

  17. Geothermal well log interpretation midterm report

    Energy Technology Data Exchange (ETDEWEB)

    Sanyal, S.K.; Wells, L.E.; Bickham, R.E.

    1979-02-01

    Reservoir types are defined according to fluid phase and temperature, lithology, geologic province, pore geometry, and salinity and fluid chemistry. Improvements are needed in lithology and porosity definition, fracture detection, and thermal evaluation for more accurate interpretation. Further efforts are directed toward improving diagnostic techniques for relating rock characteristics and log response, developing petrophysical models for geothermal systems, and developing thermal evaluation techniques. The Geothermal Well Log Interpretation study and report has concentrated only on hydrothermal geothermal reservoirs. Other geothermal reservoirs (hot dry rock, geopressured, etc.) are not considered.

  18. New portable neutron generator for well logging

    International Nuclear Information System (INIS)

    Chicanov, A.E.; Gromov, E. V.; Gulko, V. M.; Izmailov, A. V.

    1994-01-01

    The information about the design, investigation and testing of new well neutron generator for the pulse neutron logging (PNL) is given in this paper. The main physical characteristics of new PNL apparatus are: Neutron flux 2.10 sup 8 n/s ; Pulse frequency>=400 Hz; Diameter= 90 mm; Logging velocity >200 m/h; Number of probes = 2; Resource > 300 h. The generator were provided by gas-filled neutron accelerative tube named NTF-2. The perspective of application and optimization shown PNL apparatus are considered. (author)

  19. Analyzing Log Files using Data-Mining

    Directory of Open Access Journals (Sweden)

    Marius Mihut

    2008-01-01

    Full Text Available Information systems (i.e. servers, applications and communication devices create a large amount of monitoring data that are saved as log files. For analyzing them, a data-mining approach is helpful. This article presents the steps which are necessary for creating an ‘analyzing instrument’, based on an open source software called Waikato Environment for Knowledge Analysis (Weka [1]. For exemplification, a system log file created by a Windows-based operating system, is used as input file.

  20. Kaizen aplicado à logística

    OpenAIRE

    Santos, Ana Catarina Almeida

    2011-01-01

    O presente trabalho propõe alcançar um aumento de produtividade e consequente redução de custos e desperdícios ajudando o departamento logístico da Empresa Revigrés – Industria de Revestimentos de Grés, Lda, a tornar-se mais eficiente, através da aplicação da filosofia kaizen que propõe melhorias no desempenho por implementação de pequenas ações. O objetivo deste projeto é a melhoria do departamento logístico globalmente, para isso houve o recurso a pesquisas e levantamento ...

  1. Geophysical borehole logging test procedure: Final draft

    International Nuclear Information System (INIS)

    1986-09-01

    The purpose of geophysical borehole logging from the At-Depth Facility (ADF) is to provide information which will assist in characterizing the site geologic conditions and in classifying the engineering characteristics of the rock mass in the vicinity of the ADF. The direct goals of borehole logging include identification of lithologic units and their correlation from hole to hole, identification of fractured or otherwise porous or permeable zones, quantitative or semi-quantitative estimation of various formation properties, and evaluation of factors such as the borehole diameter and orientation. 11 figs., 4 tabs

  2. CS model coil experimental log book

    International Nuclear Information System (INIS)

    Nishijima, Gen; Sugimoto, Makoto; Nunoya, Yoshihiko; Wakabayashi, Hiroshi; Tsuji, Hiroshi

    2001-02-01

    Charging test of the ITER CS Model Coil which is the world's largest superconducting pulse coil and the CS Insert Coil had started at April 11, 2000 and had completed at August 18, 2000. In the campaign, total shot numbers were 356 and the size of the data file in the DAS (Data Acquisition System) was over 20 GB. This report is a database that consists of the log list and the log sheets of every shot. One can access the database, make a search, and browse results via Internet (http://1ogwww.naka.jaeri.go.jp). The database will be useful to quick search to choose necessary shots. (author)

  3. Perfil logístico de Colombia

    OpenAIRE

    Cardozo Maglioni, María Victoria; Lozano Suarez, María Goretty

    2012-01-01

    El presente documento ofrece un estudio del perfil logístico de Colombia con la finalidad de dar a conocer el estado de arte de las ciudades, puertos e infraestructura principal para facilitar la toma de decisiones de los empresarios. Para el desarrollo de este trabajo se determinaron a partir de un análisis competitivo del país; las principales ciudades y puertos; logrando establecer un inventario de maquinaria y equipo e infraestructura logística; enmarcados en retos ya establecidos en las ...

  4. Well logging instrumental and methodological research

    International Nuclear Information System (INIS)

    Andrassy, L.; Barath, I.; Dorko, R.

    1983-01-01

    This part of the Annual Report of the Roland Eoetvoes Geophysical Institute (ELGI) of Hungary for 1982, summarizes the well logging instrumental and methodological researches of ELGI. The theoretical neutron diffusion fluxes for black and brown coals of Hungarian mines were calculated. A coal probe was developed and tested in boreholes using computerized data processing and interpretation. An X-ray radiometric method was used for the determination of Cu and Fe contents of minerals. Researches in the field of magnetic susceptibility and induced polarization logging are also summarized. A rapid analyzer for bauxite mining and a photorecorder for petroleum industry were developed by ELGI. (D.Gy.)

  5. Topology Explains Why Automobile Sunshades Fold Oddly

    Science.gov (United States)

    Feist, Curtis; Naimi, Ramin

    2009-01-01

    Automobile sunshades always fold into an "odd" number of loops. The explanation why involves elementary topology (braid theory and linking number, both explained in detail here with definitions and examples), and an elementary fact from algebra about symmetric group.

  6. Reinke Edema: Watch For Vocal Fold Cysts.

    Science.gov (United States)

    Tüzüner, Arzu; Demirci, Sule; Yavanoglu, Ahmet; Kurkcuoglu, Melih; Arslan, Necmi

    2015-06-01

    Reinke edema is one of the common cause of dysphonia middle-aged population, and severe thickening of vocal folds require surgical treatment. Smoking plays a major role on etiology. Vocal fold cysts are also benign lesions and vocal trauma blamed for acquired cysts. We would like to present 3 cases with vocal fold cyst related with Reinke edema. First case had a subepidermal epidermoid cyst with Reinke edema, which could be easily observed before surgery during laryngostroboscopy. Second case had a mucous retention cyst into the edematous Reinke tissue, which was detected during surgical intervention, and third case had a epidermoid cyst that occurred 2 months after before microlaryngeal operation regarding Reinke edema reduction. These 3 cases revealed that surgical management of Reinke edema needs a careful dissection and close follow-up after surgery for presence of vocal fold cysts.

  7. Origami: Paper Folding--The Algorithmic Way.

    Science.gov (United States)

    Heukerott, Pamela Beth

    1988-01-01

    Describes origami, the oriental art of paper folding as an activity to teach upper elementary students concepts and skills in geometry involving polygons, angles, measurement, symmetry, and congruence. (PK)

  8. Frustration in Condensed Matter and Protein Folding

    Science.gov (United States)

    Li, Z.; Tanner, S.; Conroy, B.; Owens, F.; Tran, M. M.; Boekema, C.

    2014-03-01

    By means of computer modeling, we are studying frustration in condensed matter and protein folding, including the influence of temperature and Thomson-figure formation. Frustration is due to competing interactions in a disordered state. The key issue is how the particles interact to reach the lowest frustration. The relaxation for frustration is mostly a power function (randomly assigned pattern) or an exponential function (regular patterns like Thomson figures). For the atomic Thomson model, frustration is predicted to decrease with the formation of Thomson figures at zero kelvin. We attempt to apply our frustration modeling to protein folding and dynamics. We investigate the homogeneous protein frustration that would cause the speed of the protein folding to increase. Increase of protein frustration (where frustration and hydrophobicity interplay with protein folding) may lead to a protein mutation. Research is supported by WiSE@SJSU and AFC San Jose.

  9. Self-folding miniature elastic electric devices

    International Nuclear Information System (INIS)

    Miyashita, Shuhei; Meeker, Laura; Rus, Daniela; Tolley, Michael T; Wood, Robert J

    2014-01-01

    Printing functional materials represents a considerable impact on the access to manufacturing technology. In this paper we present a methodology and validation of print-and-self-fold miniature electric devices. Polyvinyl chloride laminated sheets based on metalized polyester film show reliable self-folding processes under a heat application, and it configures 3D electric devices. We exemplify this technique by fabricating fundamental electric devices, namely a resistor, capacitor, and inductor. Namely, we show the development of a self-folded stretchable resistor, variable resistor, capacitive strain sensor, and an actuation mechanism consisting of a folded contractible solenoid coil. Because of their pre-defined kinematic design, these devices feature elasticity, making them suitable as sensors and actuators in flexible circuits. Finally, an RLC circuit obtained from the integration of developed devices is demonstrated, in which the coil based actuator is controlled by reading a capacitive strain sensor. (paper)

  10. Benign Lesions of The Vocal Fold

    Directory of Open Access Journals (Sweden)

    Ozgur Surmelioglu

    2013-02-01

    Full Text Available Benign lesions of vocal folds are common disorders. Fifty percent of patients who have sound complaints are found to have these lesions after endoscopic and stroboscopic examinations. Benign vocal fold diseases are primarily caused by vibratory trauma. However they may also occur as a result of viral infections and congenital causes. These lesions are often presented with the complaints of dysphonia. [Archives Medical Review Journal 2013; 22(1.000: 86-95

  11. Folding of non-Euclidean curved shells

    Science.gov (United States)

    Bende, Nakul; Evans, Arthur; Innes-Gold, Sarah; Marin, Luis; Cohen, Itai; Santangelo, Christian; Hayward, Ryan

    2015-03-01

    Origami-based folding of 2D sheets has been of recent interest for a variety of applications ranging from deployable structures to self-folding robots. Though folding of planar sheets follows well-established principles, folding of curved shells involves an added level of complexity due to the inherent influence of curvature on mechanics. In this study, we use principles from differential geometry and thin shell mechanics to establish fundamental rules that govern folding of prototypical creased shells. In particular, we show how the normal curvature of a crease line controls whether the deformation is smooth or discontinuous, and investigate the influence of shell thickness and boundary conditions. We show that snap-folding of shells provides a route to rapid actuation on time-scales dictated by the speed of sound. The simple geometric design principles developed can be applied at any length-scale, offering potential for bio-inspired soft actuators for tunable optics, microfluidics, and robotics. This work was funded by the National Science Foundation through EFRI ODISSEI-1240441 with additional support to S.I.-G. through the UMass MRSEC DMR-0820506 REU program.

  12. Vocal fold hemorrhage: factors predicting recurrence.

    Science.gov (United States)

    Lennon, Christen J; Murry, Thomas; Sulica, Lucian

    2014-01-01

    Vocal fold hemorrhage is an acute phonotraumatic injury treated with voice rest; recurrence is a generally accepted indication for surgical intervention. This study aims to identify factors predictive of recurrence based on outcomes of a large clinical series. Retrospective cohort. Retrospective review of cases of vocal fold hemorrhage presenting to a university laryngology service. Demographic information was compiled. Videostroboscopic exams were evaluated for hemorrhage extent, presence of varix, mucosal lesion, and/or vocal fold paresis. Vocal fold hemorrhage recurrence was the main outcome measure. Follow-up telephone survey was used to complement clinical data. Forty-seven instances of vocal fold hemorrhage were evaluated (25M:22F; 32 professional voice users). Twelve of the 47 (26%) patients experienced recurrence. Only the presence of varix demonstrated significant association with recurrence (P = 0.0089) on multivariate logistic regression. Vocal fold hemorrhage recurred in approximately 26% of patients. Varix was a predictor of recurrence, with 48% of those with varix experiencing recurrence. Monitoring, behavioral management and/or surgical intervention may be indicated to treat patients with such characteristics. © 2013 The American Laryngological, Rhinological and Otological Society, Inc.

  13. Extracting useful knowledge from event logs

    DEFF Research Database (Denmark)

    Djenouri, Youcef; Belhadi, Asma; Fournier-Viger, Philippe

    2018-01-01

    Business process analysis is a key activity that aims at increasing the efficiency of business operations. In recent years, several data mining based methods have been designed for discovering interesting patterns in event logs. A popular type of methods consists of applying frequent itemset mini...

  14. Potential for shared log transport services

    Science.gov (United States)

    Tim McDonald; Steve Taylor; Jorge Valenzuela

    2001-01-01

    A simulation model of a log transport logistics network was developed. The model could be structured to either share truck capacity among a group of loggers, or to assign a fixed number of trucks to individual loggers. Another variation of the model allowed the use of a staging yard to set out loaded trailers and deliver them to destinations using dedicated shuttle...

  15. Identifying unstable sites on logging roads

    Science.gov (United States)

    R. M. Rice; J. Lewis

    1986-01-01

    Logging roads are an important source of forestry-related erosion. The amount of erosion on a forest road is determined by the interaction between how the road is constructed and maintained and the environment in which it is built. The roads in this study were constructed with large bulldozers, and most excavated material was sidecast. The roads studied were...

  16. Narrating Illegal Logging Across the Globe

    DEFF Research Database (Denmark)

    Winkel, Georg; Leipold, Sina; Buhmann, Karin

    2017-01-01

    In the last decade illegal logging has triggered the attention of policy makers and scholars of international forest governance. The issue is multifaceted, involving aspects of social and environmental sustainability, development, trade, access to markets and competitiveness. A vivid academic deb...

  17. Modelling tropical forests response to logging

    Science.gov (United States)

    Cazzolla Gatti, Roberto; Di Paola, Arianna; Valentini, Riccardo; Paparella, Francesco

    2013-04-01

    Tropical rainforests are among the most threatened ecosystems by large-scale fragmentation due to human activity such as heavy logging and agricultural clearance. Although, they provide crucial ecosystem goods and services, such as sequestering carbon from the atmosphere, protecting watersheds and conserving biodiversity. In several countries forest resource extraction has experienced a shift from clearcutting to selective logging to maintain a significant forest cover and understock of living biomass. However the knowledge on the short and long-term effects of removing selected species in tropical rainforest are scarce and need to be further investigated. One of the main effects of selective logging on forest dynamics seems to be the local disturbance which involve the invasion of open space by weed, vines and climbers at the expense of the late-successional state cenosis. We present a simple deterministic model that describes the dynamics of tropical rainforest subject to selective logging to understand how and why weeds displace native species. We argue that the selective removal of tallest tropical trees carries out gaps of light that allow weeds, vines and climbers to prevail on native species, inhibiting the possibility of recovery of the original vegetation. Our results show that different regime shifts may occur depending on the type of forest management adopted. This hypothesis is supported by a dataset of trees height and weed/vines cover that we collected from 9 plots located in Central and West Africa both in untouched and managed areas.

  18. ADN* Density log estimation Using Rockcell*

    International Nuclear Information System (INIS)

    Okuku, C.; Iloghalu, Emeka. M.; Omotayo, O.

    2003-01-01

    This work is intended to inform on the possibilities of estimating good density data in zones associated with sliding in a reservoir with ADN* tool with or without ADOS in string in cases where repeat sections were not done, possibly due to hole stability or directional concerns. This procedure has been equally used to obtain a better density data in corkscrew holes. Density data (ROBB) was recomputed using neural network in RockCell* to estimate the density over zones of interest. RockCell* is a Schlumberger software that has neural network functionally which can be used to estimate missing logs using the combination of the responses of other log curves and intervals that are not affected by sliding. In this work, an interval was selected and within this interval twelve litho zones were defined using the unsupervised neural network. From this a training set was selected based on intervals of very good log responses outside the sliding zones. This training set was used to train and run the neural network for a specific lithostratigraphic interval. The results matched the known good density curve. Then after this, an estimation of the density curve was done using the supervised neural network. The output from this estimation matched very closely in the good portions of the log, thus providing some density measurements in the sliding zone. This methodology provides a scientific solution to missing data during the process of Formation evaluation

  19. Changes in the Logging Labor Force

    Science.gov (United States)

    Charles H. Wolf; Jean W. Nolley

    1977-01-01

    Employment in the logging industry dropped 28 percent between 1950 and 1970, while output of industrial roundwood increased 31 percent. Today's loggers are older, better educated, and more skilled. A large proportion are self-employed, many work less than a full year, and a substantial number have incomes below the poverty level. Mechanization of timber harvesting...

  20. Alaska midgrade logs: supply and offshore demand.

    Science.gov (United States)

    Donald F. Flora; Wendy J. McGinnis

    1989-01-01

    The outlook for shipments and prices of export logs from Alaska differs significantly by grade (quality class). For the majority lying in the middle of the value range, the trend of prices is projected to increase $200 per thousand board feet, or about 55 percent, by 2000. Shipments are expected to rise about 30 percent by 1995 and then subside about 10 percent. These...

  1. Analyzing Grid Log Data with Affinity Propagation

    NARCIS (Netherlands)

    Modena, G.; van Someren, M.W.; Ali, M; Bosse, T.; Hindriks, K.V.; Hoogendoorn, M.; Jonker, C.M; Treur, J.

    2013-01-01

    In this paper we present an unsupervised learning approach to detect meaningful job traffic patterns in Grid log data. Manual anomaly detection on modern Grid environments is troublesome given their increasing complexity, the distributed, dynamic topology of the network and heterogeneity of the jobs

  2. Exploration and grade control neutron logging

    International Nuclear Information System (INIS)

    Eisler, P.L.

    1982-01-01

    Techniques used in neutron logging in boreholes are discussed. They include the application of neutron probes to porosity measurements, to lithological determinations based on macroscopic cross-section measurements and measurements of the concentration of chemical constituents in rocks and ores

  3. Explorations in statistics: the log transformation.

    Science.gov (United States)

    Curran-Everett, Douglas

    2018-06-01

    Learning about statistics is a lot like learning about science: the learning is more meaningful if you can actively explore. This thirteenth installment of Explorations in Statistics explores the log transformation, an established technique that rescales the actual observations from an experiment so that the assumptions of some statistical analysis are better met. A general assumption in statistics is that the variability of some response Y is homogeneous across groups or across some predictor variable X. If the variability-the standard deviation-varies in rough proportion to the mean value of Y, a log transformation can equalize the standard deviations. Moreover, if the actual observations from an experiment conform to a skewed distribution, then a log transformation can make the theoretical distribution of the sample mean more consistent with a normal distribution. This is important: the results of a one-sample t test are meaningful only if the theoretical distribution of the sample mean is roughly normal. If we log-transform our observations, then we want to confirm the transformation was useful. We can do this if we use the Box-Cox method, if we bootstrap the sample mean and the statistic t itself, and if we assess the residual plots from the statistical model of the actual and transformed sample observations.

  4. Apache Flume distributed log collection for Hadoop

    CERN Document Server

    D'Souza, Subas

    2013-01-01

    A starter guide that covers Apache Flume in detail.Apache Flume: Distributed Log Collection for Hadoop is intended for people who are responsible for moving datasets into Hadoop in a timely and reliable manner like software engineers, database administrators, and data warehouse administrators

  5. 47 CFR 80.409 - Station logs.

    Science.gov (United States)

    2010-10-01

    ... primary office or available to the Commission via secured access to the licensee's Internet web site. Logs..., together with the time of such observation or occurrence and the position of the ship or other mobile unit... devices which do not have integral navigation receivers, including: VHF DSC, MF DSC, satellite EPIRB and...

  6. Geophysical logging for mineral exploration and development

    International Nuclear Information System (INIS)

    Plouffe, R.D.

    1981-01-01

    It is possible to retrieve from small-diameter holes geophysical data for qualitative interpretation in exploration and quantitative interpretation in the development of orebodies. The primary objectives in the exploration stage are to identify where, within a hole, economic minerals are, and to help in lithological interpretations. Other aspects, which are more quantitative, are the interpretation of downhole logs for parameters which can be used in surface geophysical methods (i.e. density for gravity surveys, acoustic velocities for seismic surveys, and magnetic susceptibility for airborne and ground magnetic surveys). Recent advances in equipment design, portability and durability have made downhole logging in exploration more inexpensive and reliable. This new equipment is being used to generate very precise quantitative results. This is especially true on uranium development projects. The interpretation of gamma logs for eU 3 O 8 values has finally become precise enough that they have begun to replace chemical values in reserve calculations. Another part of development data is density and equilibrium information, which, with today's technology, is being derived from downhole probing. In the years to come, the trends for many metals are toward neutron activation techniques, or in-situ assaying, and the use of multiple logs for better lithological and physical rock property determinations. (auth)

  7. Information needs for increasing log transport efficiency

    Science.gov (United States)

    Timothy P. McDonald; Steven E. Taylor; Robert B. Rummer; Jorge Valenzuela

    2001-01-01

    Three methods of dispatching trucks to loggers were tested using a log transport simulation model: random allocation, fixed assignment of trucks to loggers, and dispatch based on knowledge of the current status of trucks and loggers within the system. This 'informed' dispatch algorithm attempted to minimize the difference in time between when a logger would...

  8. Root cause analysis with enriched process logs

    NARCIS (Netherlands)

    Suriadi, S.; Ouyang, C.; Aalst, van der W.M.P.; Hofstede, ter A.H.M.; La Rosa, M.; Soffer, P.

    2013-01-01

    n the field of process mining, the use of event logs for the purpose of root cause analysis is increasingly studied. In such an analysis, the availability of attributes/features that may explain the root cause of some phenomena is crucial. Currently, the process of obtaining these attributes from

  9. Mining process performance from event logs

    NARCIS (Netherlands)

    Adriansyah, A.; Buijs, J.C.A.M.; La Rosa, M.; Soffer, P.

    2013-01-01

    In systems where process executions are not strictly enforced by a predefined process model, obtaining reliable performance information is not trivial. In this paper, we analyzed an event log of a real-life process, taken from a Dutch financial institute, using process mining techniques. In

  10. Lianas and logging in West Africa

    NARCIS (Netherlands)

    Parren, M.P.E.

    2003-01-01

    The role of lianas in relation to logging activities is analysed in a lowland moist forest in Cameroon. Lianas are an abundant, diverse, and conspicuous growth form in nearly all tropical forests. Lianas are mostly seen as a nuisance by foresters. Cutting of liana stems is an important operation in

  11. Logging Options to Minimize Soil Disturbance in the Northern Lake States

    Science.gov (United States)

    Douglas M. Stone

    2002-01-01

    Forest harvesting is likely to have greater impacts on site productivity than any other activity during the rotation. We determined effects of commercial, winter-logging of four aspen-dominated stands on site disturbance and development of regeneration on clay soils in western Upper Michigan. A large skidder caused deep rutting on 20% of a site in a thinning that...

  12. NUMERICAL STUDY OF ELECTROMAGNETIC WAVES GENERATED BY A PROTOTYPE DIELECTRIC LOGGING TOOL

    Science.gov (United States)

    To understand the electromagnetic waves generated by a prototype dielectric logging tool, a numerical study was conducted using both the finite-difference, time-domain method and a frequency- wavenumber method. When the propagation velocity in the borehole was greater than th...

  13. A watershed's response to logging and roads: South Fork of Caspar Creek, California, 1967-1976

    Science.gov (United States)

    Raymond M. Rice; Forest B. Tilley; Patricia A. Datzman

    1979-01-01

    The effect of logging and roadbuilding on erosion and sedimentation are analyzed by comparing the North Fork and South Fork of Caspar Creek, in northern California. Increased sediment production during the 4 years after road construction, was 326 cu yd/sq mi/yr—80 percent greater than that predicted by the predisturbance regression analysis. The average...

  14. Requirements-Driven Log Analysis Extended Abstract

    Science.gov (United States)

    Havelund, Klaus

    2012-01-01

    Imagine that you are tasked to help a project improve their testing effort. In a realistic scenario it will quickly become clear, that having an impact is diffcult. First of all, it will likely be a challenge to suggest an alternative approach which is significantly more automated and/or more effective than current practice. The reality is that an average software system has a complex input/output behavior. An automated testing approach will have to auto-generate test cases, each being a pair (i; o) consisting of a test input i and an oracle o. The test input i has to be somewhat meaningful, and the oracle o can be very complicated to compute. Second, even in case where some testing technology has been developed that might improve current practice, it is then likely difficult to completely change the current behavior of the testing team unless the technique is obviously superior and does everything already done by existing technology. So is there an easier way to incorporate formal methods-based approaches than the full edged test revolution? Fortunately the answer is affirmative. A relatively simple approach is to benefit from possibly already existing logging infrastructure, which after all is part of most systems put in production. A log is a sequence of events, generated by special log recording statements, most often manually inserted in the code by the programmers. An event can be considered as a data record: a mapping from field names to values. We can analyze such a log using formal methods, for example checking it against a formal specification. This separates running the system for analyzing its behavior. It is not meant as an alternative to testing since it does not address the important in- put generation problem. However, it offers a solution which testing teams might accept since it has low impact on the existing process. A single person might be assigned to perform such log analysis, compared to the entire testing team changing behavior.

  15. Anomalous self potential (sp) log signatures observed in a water ...

    African Journals Online (AJOL)

    Geophysical logging was done after drilling had been completed in a water well at Okwudor, South Eastern Nigeria. Three electric logs were run viz: Self Potential (SP), Resistivity N16″ and N64″ logs. An anomaly was observed in the SP log. The SP results from this well show some deviation from the standard norm.

  16. Using Web Server Logs in Evaluating Instructional Web Sites.

    Science.gov (United States)

    Ingram, Albert L.

    2000-01-01

    Web server logs contain a great deal of information about who uses a Web site and how they use it. This article discusses the analysis of Web logs for instructional Web sites; reviews the data stored in most Web server logs; demonstrates what further information can be gleaned from the logs; and discusses analyzing that information for the…

  17. Stress wave sorting of red maple logs for structural quality

    Science.gov (United States)

    Xiping Wang; Robert J. Ross; David W. Green; Brian Brashaw; Karl Englund; Michael Wolcott

    2004-01-01

    Existing log grading procedures in the United States make only visual assessments of log quality. These procedures do not incorporate estimates of the modulus of elasticity (MOE) of logs. It is questionable whether the visual grading procedures currently used for logs adequately assess the potential quality of structural products manufactured from them, especially...

  18. Tradeoffs and interdependence in the Alaska cant and log markets.

    Science.gov (United States)

    Donald Flora; Una Woller; Michael. Neergaard

    1990-01-01

    During the 1980s, log exports from Alaska have risen while cant (lumber) exports have declined. Eight explanations for the difference between cant and log market behavior are explored. It seems that declining demand for wood products in Japan and a surge of private-sector log harvests in Alaska are enough to account for the apparent substitution of logs for cants. It...

  19. Performance of sampling methods to estimate log characteristics for wildlife.

    Science.gov (United States)

    Lisa J. Bate; Torolf R. Torgersen; Michael J. Wisdom; Edward O. Garton

    2004-01-01

    Accurate estimation of the characteristics of log resources, or coarse woody debris (CWD), is critical to effective management of wildlife and other forest resources. Despite the importance of logs as wildlife habitat, methods for sampling logs have traditionally focused on silvicultural and fire applications. These applications have emphasized estimates of log volume...

  20. Advanced of X-ray fluorescence logging technique in China

    International Nuclear Information System (INIS)

    Zhou Sichun; Ge Liangquan; Lai Wanchang; Yang Qiang

    2010-01-01

    The paper discuses principle of X-ray fluorescence logging, and introduces advanced of X-ray fluorescence logging technique in China. By 2009, third generation XRF logging instrument has been developed in China, and good logging result has been obtained in Lala copper mine. (authors)

  1. Logging utilization in Idaho: Current and past trends

    Science.gov (United States)

    Eric A. Simmons; Todd A. Morgan; Erik C. Berg; Stanley J. Zarnoch; Steven W. Hayes; Mike T. Thompson

    2014-01-01

    A study of commercial timber-harvesting activities in Idaho was conducted during 2008 and 2011 to characterize current tree utilization, logging operations, and changes from previous Idaho logging utilization studies. A two-stage simple random sampling design was used to select sites and felled trees for measurement within active logging sites. Thirty-three logging...

  2. Experimental investigation of protein folding and misfolding.

    Science.gov (United States)

    Dobson, Christopher M

    2004-09-01

    Newly synthesised proteins need to fold, often to intricate and close-packed structures, in order to function. The underlying mechanism by which this complex process takes place both in vitro and in vivo is now becoming understood, at least in general terms, as a result of the application of a wide range of biophysical and computational methods used in combination with the techniques of biochemistry and protein engineering. It is increasingly apparent, however, that folding is not only crucial for generating biological activity, but that it is also coupled to a wide range of processes within the cell, ranging from the trafficking of proteins to specific organelles to the regulation of cell growth and differentiation. Not surprisingly, therefore, the failure of proteins to fold appropriately, or to remain correctly folded, is associated with a large number of cellular malfunctions that give rise to disease. Misfolding, and its consequences such as aggregation, can be investigated by extending the types of techniques used to study the normal folding process. Application of these techniques is enabling the development of a unified description of the interconversion and regulation of the different conformational states available to proteins in living systems. Such a description proves a generic basis for understanding the fundamental links between protein misfolding and its associated clinical disorders, such as Alzheimer's disease and Type II diabetes, and for exploring novel therapeutic strategies directed at their prevention and treatment on a rational basis.

  3. Kinetics and Thermodynamics of Membrane Protein Folding

    Directory of Open Access Journals (Sweden)

    Ernesto A. Roman

    2014-03-01

    Full Text Available Understanding protein folding has been one of the great challenges in biochemistry and molecular biophysics. Over the past 50 years, many thermodynamic and kinetic studies have been performed addressing the stability of globular proteins. In comparison, advances in the membrane protein folding field lag far behind. Although membrane proteins constitute about a third of the proteins encoded in known genomes, stability studies on membrane proteins have been impaired due to experimental limitations. Furthermore, no systematic experimental strategies are available for folding these biomolecules in vitro. Common denaturing agents such as chaotropes usually do not work on helical membrane proteins, and ionic detergents have been successful denaturants only in few cases. Refolding a membrane protein seems to be a craftsman work, which is relatively straightforward for transmembrane β-barrel proteins but challenging for α-helical membrane proteins. Additional complexities emerge in multidomain membrane proteins, data interpretation being one of the most critical. In this review, we will describe some recent efforts in understanding the folding mechanism of membrane proteins that have been reversibly refolded allowing both thermodynamic and kinetic analysis. This information will be discussed in the context of current paradigms in the protein folding field.

  4. Bifurcation of self-folded polygonal bilayers

    Science.gov (United States)

    Abdullah, Arif M.; Braun, Paul V.; Hsia, K. Jimmy

    2017-09-01

    Motivated by the self-assembly of natural systems, researchers have investigated the stimulus-responsive curving of thin-shell structures, which is also known as self-folding. Self-folding strategies not only offer possibilities to realize complicated shapes but also promise actuation at small length scales. Biaxial mismatch strain driven self-folding bilayers demonstrate bifurcation of equilibrium shapes (from quasi-axisymmetric doubly curved to approximately singly curved) during their stimulus-responsive morphing behavior. Being a structurally instable, bifurcation could be used to tune the self-folding behavior, and hence, a detailed understanding of this phenomenon is appealing from both fundamental and practical perspectives. In this work, we investigated the bifurcation behavior of self-folding bilayer polygons. For the mechanistic understanding, we developed finite element models of planar bilayers (consisting of a stimulus-responsive and a passive layer of material) that transform into 3D curved configurations. Our experiments with cross-linked Polydimethylsiloxane samples that change shapes in organic solvents confirmed our model predictions. Finally, we explored a design scheme to generate gripper-like architectures by avoiding the bifurcation of stimulus-responsive bilayers. Our research contributes to the broad field of self-assembly as the findings could motivate functional devices across multiple disciplines such as robotics, artificial muscles, therapeutic cargos, and reconfigurable biomedical devices.

  5. Limitations and developing directions of pulsed neutron logging

    International Nuclear Information System (INIS)

    Wu Wensheng; Xiao Lizhi

    2007-01-01

    The paper explains briefly the principle of pulsed neutron logging method, summarizes the system and uses of the method in petroleum logging. The paper points out the limitations of pulsed neutron logging such as low precise measurements, low logging speed, plenty of influence factors, low vertical resolution, bad adaptability, difficult logging interpretation and so on, and expounds its developing directions in hardware, software, method and principle. (authors)

  6. Certified and uncertified logging concessions compared in Gabon: changes in stand structure, tree species, and biomass.

    Science.gov (United States)

    Medjibe, V P; Putz, Francis E; Romero, Claudia

    2013-03-01

    Forest management certification is assumed to promote sustainable forest management, but there is little field-based evidence to support this claim. To help fill this gap, we compared a Forest Stewardship Council (FSC)-certified with an adjacent uncertified, conventionally logged concession (CL) in Gabon on the basis of logging damage, above-ground biomass (AGB), and tree species diversity and composition. Before logging, we marked, mapped, and measured all trees >10 cm dbh in 20 and twelve 1-ha permanent plots in the FSC and CL areas, respectively. Soil and tree damage due to felling, skidding, and road-related activities was then assessed 2-3 months after the 508 ha FSC study area and the 200 ha CL study area were selectively logged at respective intensities of 5.7 m(3)/ha (0.39 trees/ha) and 11.4 m(3)/ha (0.76 trees/ha). For each tree felled, averages of 9.1 and 20.9 other trees were damaged in the FSC and CL plots, respectively; when expressed as the impacts per timber volume extracted, the values did not differ between the two treatments. Skid trails covered 2.9 % more of the CL surface, but skid trail length per unit timber volume extracted was not greater. Logging roads were wider in the CL than FSC site and disturbed 4.7 % more of the surface. Overall, logging caused declines in AGB of 7.1 and 13.4 % at the FSC and CL sites, respectively. Changes in tree species composition were small but greater for the CL site. Based on these findings and in light of the pseudoreplicated study design with less-than perfect counterfactual, we cautiously conclude that certification yields environmental benefits even after accounting for differences in logging intensities.

  7. Non-cylindrical fold growth in the Zagros fold and thrust belt (Kurdistan, NE-Iraq)

    Science.gov (United States)

    Bartl, Nikolaus; Bretis, Bernhard; Grasemann, Bernhard; Lockhart, Duncan

    2010-05-01

    The Zagros mountains extends over 1800 km from Kurdistan in N-Iraq to the Strait of Hormuz in Iran and is one of the world most promising regions for the future hydrocarbon exploration. The Zagros Mountains started to form as a result of the collision between the Eurasian and Arabian Plates, whose convergence began in the Late Cretaceous as part of the Alpine-Himalayan orogenic system. Geodetic and seismological data document that both plates are still converging and that the fold and thrust belt of the Zagros is actively growing. Extensive hydrocarbon exploration mainly focuses on the antiforms of this fold and thrust belt and therefore the growth history of the folds is of great importance. This work investigates by means of structural field work and quantitative geomorphological techniques the progressive fold growth of the Permam, Bana Bawi- and Safeen- Anticlines located in the NE of the city of Erbil in the Kurdistan region of Northern Iraq. This part of the Zagros fold and thrust belt belongs to the so-called Simply Folded Belt, which is dominated by gentle to open folding. Faults or fault related folds have only minor importance. The mechanical anisotropy of the formations consisting of a succession of relatively competent (massive dolomite and limestone) and incompetent (claystone and siltstone) sediments essentially controls the deformation pattern with open to gentle parallel folding of the competent layers and flexural flow folding of the incompetent layers. The characteristic wavelength of the fold trains is around 10 km. Due to faster erosion of the softer rock layers in the folded sequence, the more competent lithologies form sharp ridges with steeply sloping sides along the eroded flanks of the anticlines. Using an ASTER digital elevation model in combination with geological field data we quantified 250 drainage basins along the different limbs of the subcylindrical Permam, Bana Bawi- and Safeen- Anticlines. Geomorphological indices of the drainage

  8. The Risk of Vocal Fold Atrophy after Serial Corticosteroid Injections of the Vocal Fold.

    Science.gov (United States)

    Shi, Lucy L; Giraldez-Rodriguez, Laureano A; Johns, Michael M

    2016-11-01

    The aim of this study was to illustrate the risk of vocal fold atrophy in patients who receive serial subepithelial steroid injections for vocal fold scar. This study is a retrospective case report of two patients who underwent a series of weekly subepithelial infusions of 10 mg/mL dexamethasone for benign vocal fold lesion. Shortly after the procedures, both patients developed a weak and breathy voice. The first patient was a 53-year-old man with radiation-induced vocal fold stiffness. Six injections were performed unilaterally, and 1 week later, he developed unilateral vocal fold atrophy with new glottal insufficiency. The second patient was a 67-year-old woman with severe vocal fold inflammation related to laryngitis and calcinosis, Raynaud's phenomenon, esophagean dysmotility, sclerodactyly, and telangiectasia (CREST) syndrome. Five injections were performed bilaterally, and 1 week later, she developed bilateral vocal fold atrophy with a large midline glottal gap during phonation. In both cases, the steroid-induced vocal atrophy resolved spontaneously after 4 months. Serial subepithelial steroid infusions of the vocal folds, although safe in the majority of patients, carry the risk of causing temporary vocal fold atrophy when given at short intervals. Copyright © 2016 The Voice Foundation. Published by Elsevier Inc. All rights reserved.

  9. Multiple Browsers Structure Tree Recruitment in Logged Temperate Forests.

    Directory of Open Access Journals (Sweden)

    Edward K Faison

    Full Text Available Historical extirpations have resulted in depauperate large herbivore assemblages in many northern forests. In eastern North America, most forests are inhabited by a single wild ungulate species, white-tailed deer (Odocoileus virginianus, and relationships between deer densities and impacts on forest regeneration are correspondingly well documented. Recent recolonizations by moose (Alces americanus in northeastern regions complicate established deer density thresholds and predictions of browsing impacts on forest dynamics because size and foraging differences between the two animals suggest a lack of functional redundancy. We asked to what extent low densities of deer + moose would structure forest communities differently from that of low densities of deer in recently logged patch cuts of Massachusetts, USA. In each site, a randomized block with three treatment levels of large herbivores-no-ungulates (full exclosure, deer (partial exclosure, and deer + moose (control was established. After 6-7 years, deer + moose reduced stem densities and basal area by 2-3-fold, Prunus pensylvanica and Quercus spp. recruitment by 3-6 fold, and species richness by 1.7 species (19%. In contrast, in the partial exclosures, deer had non-significant effects on stem density, basal area, and species composition, but significantly reduced species richness by 2.5 species on average (28%. Deer browsing in the partial exclosure was more selective than deer + moose browsing together, perhaps contributing to the decline in species richness in the former treatment and the lack of additional decline in the latter. Moose used the control plots at roughly the same frequency as deer (as determined by remote camera traps, suggesting that the much larger moose was the dominant browser species in terms of animal biomass in these cuts. A lack of functional redundancy with respect to foraging behavior between sympatric large herbivores may explain combined browsing effects that were

  10. Multiple browsers structure tree recruitment in logged temperate forests

    Science.gov (United States)

    Faison, Edward K.; DeStefano, Stephen; Foster, David R.; Rapp, Joshua M.; Compton, Justin A.

    2016-01-01

    Historical extirpations have resulted in depauperate large herbivore assemblages in many northern forests. In eastern North America, most forests are inhabited by a single wild ungulate species, white-tailed deer (Odocoileus virginianus), and relationships between deer densities and impacts on forest regeneration are correspondingly well documented. Recent recolonizations by moose (Alces americanus) in northeastern regions complicate established deer density thresholds and predictions of browsing impacts on forest dynamics because size and foraging differences between the two animals suggest a lack of functional redundancy. We asked to what extent low densities of deer + moose would structure forest communities differently from that of low densities of deer in recently logged patch cuts of Massachusetts, USA. In each site, a randomized block with three treatment levels of large herbivores–no-ungulates (full exclosure), deer (partial exclosure), and deer + moose (control) was established. After 6–7 years, deer + moose reduced stem densities and basal area by 2-3-fold, Prunus pensylvanica and Quercus spp. recruitment by 3–6 fold, and species richness by 1.7 species (19%). In contrast, in the partial exclosures, deer had non-significant effects on stem density, basal area, and species composition, but significantly reduced species richness by 2.5 species on average (28%). Deer browsing in the partial exclosure was more selective than deer + moose browsing together, perhaps contributing to the decline in species richness in the former treatment and the lack of additional decline in the latter. Moose used the control plots at roughly the same frequency as deer (as determined by remote camera traps), suggesting that the much larger moose was the dominant browser species in terms of animal biomass in these cuts. A lack of functional redundancy with respect to foraging behavior between sympatric large herbivores may explain combined browsing effects that were

  11. Improvement of a Vocal Fold Imaging System

    Energy Technology Data Exchange (ETDEWEB)

    Krauter, K. G. [Lawrence Livermore National Lab. (LLNL), Livermore, CA (United States)

    2017-02-01

    Medical professionals can better serve their patients through continual update of their imaging tools. A wide range of pathologies and disease may afflict human vocal cords or, as they’re also known, vocal folds. These diseases can affect human speech hampering the ability of the patient to communicate. Vocal folds must be opened for breathing and the closed to produce speech. Currently methodologies to image markers of potential pathologies are difficult to use and often fail to detect early signs of disease. These current methodologies rely on a strobe light and slower frame rate camera in an attempt to obtain images as the vocal folds travel over the full extent of their motion.

  12. Analysis of high-fold gamma data

    International Nuclear Information System (INIS)

    Radford, D. C.; Cromaz, M.; Beyer, C. J.

    1999-01-01

    Historically, γ-γ and γ-γ-γ coincidence spectra were utilized to build nuclear level schemes. With the development of large detector arrays, it has became possible to analyze higher fold coincidence data sets. This paper briefly reports on software to analyze 4-fold coincidence data sets that allows creation of 4-fold histograms (hypercubes) of at least 1024 channels per side (corresponding to a 43 gigachannel data space) that will fit onto a few gigabytes of disk space, and extraction of triple-gated spectra in a few seconds. Future detector arrays may have even much higher efficiencies, and detect as many as 15 or 20 γ rays simultaneously; such data will require very different algorithms for storage and analysis. Difficulties inherent in the analysis of such data are discussed, and two possible new solutions are presented, namely adaptive list-mode systems and 'list-list-mode' storage

  13. Extreme Mechanics: Self-Folding Origami

    Science.gov (United States)

    Santangelo, Christian D.

    2017-03-01

    Origami has emerged as a tool for designing three-dimensional structures from flat films. Because they can be fabricated by lithographic or roll-to-roll processing techniques, they have great potential for the manufacture of complicated geometries and devices. This article discusses the mechanics of origami and kirigami with a view toward understanding how to design self-folding origami structures. Whether an origami structure can be made to fold autonomously depends strongly on the geometry and kinematics of the origami fold pattern. This article collects some of the results on origami rigidity into a single framework, and discusses how these aspects affect the foldability of origami. Despite recent progress, most problems in origami and origami design remain completely open.

  14. In vitro folding of inclusion body proteins.

    Science.gov (United States)

    Rudolph, R; Lilie, H

    1996-01-01

    Insoluble, inactive inclusion bodies are frequently formed upon recombinant protein production in transformed microorganisms. These inclusion bodies, which contain the recombinant protein in an highly enriched form, can be isolated by solid/liquid separation. After solubilization, native proteins can be generated from the inactive material by using in vitro folding techniques. New folding procedures have been developed for efficient in vitro reconstitution of complex hydrophobic, multidomain, oligomeric, or highly disulfide-bonded proteins. These protocols take into account process parameters such as protein concentration, catalysis of disulfide bond formation, temperature, pH, and ionic strength, as well as specific solvent ingredients that reduce unproductive side reactions. Modification of the protein sequence has been exploited to improve in vitro folding.

  15. Solvent Effects on Protein Folding/Unfolding

    Science.gov (United States)

    García, A. E.; Hillson, N.; Onuchic, J. N.

    Pressure effects on the hydrophobic potential of mean force led Hummer et al. to postulate a model for pressure denaturation of proteins in which denaturation occurs by means of water penetration into the protein interior, rather than by exposing the protein hydrophobic core to the solvent --- commonly used to describe temperature denaturation. We study the effects of pressure in protein folding/unfolding kinetics in an off-lattice minimalist model of a protein in which pressure effects have been incorporated by means of the pair-wise potential of mean force of hydrophobic groups in water. We show that pressure slows down the kinetics of folding by decreasing the reconfigurational diffusion coefficient and moves the location of the folding transition state.

  16. Exact folded-band chaotic oscillator.

    Science.gov (United States)

    Corron, Ned J; Blakely, Jonathan N

    2012-06-01

    An exactly solvable chaotic oscillator with folded-band dynamics is shown. The oscillator is a hybrid dynamical system containing a linear ordinary differential equation and a nonlinear switching condition. Bounded oscillations are provably chaotic, and successive waveform maxima yield a one-dimensional piecewise-linear return map with segments of both positive and negative slopes. Continuous-time dynamics exhibit a folded-band topology similar to Rössler's oscillator. An exact solution is written as a linear convolution of a fixed basis pulse and a discrete binary sequence, from which an equivalent symbolic dynamics is obtained. The folded-band topology is shown to be dependent on the symbol grammar.

  17. SDEM modelling of fault-propagation folding

    DEFF Research Database (Denmark)

    Clausen, O.R.; Egholm, D.L.; Poulsen, Jane Bang

    2009-01-01

    and variations in Mohr-Coulomb parameters including internal friction. Using SDEM modelling, we have mapped the propagation of the tip-line of the fault, as well as the evolution of the fold geometry across sedimentary layers of contrasting rheological parameters, as a function of the increased offset......Understanding the dynamics and kinematics of fault-propagation-folding is important for evaluating the associated hydrocarbon play, for accomplishing reliable section balancing (structural reconstruction), and for assessing seismic hazards. Accordingly, the deformation style of fault-propagation...... a precise indication of when faults develop and hence also the sequential evolution of secondary faults. Here we focus on the generation of a fault -propagated fold with a reverse sense of motion at the master fault, and varying only the dip of the master fault and the mechanical behaviour of the deformed...

  18. Heterochiral Knottin Protein: Folding and Solution Structure.

    Science.gov (United States)

    Mong, Surin K; Cochran, Frank V; Yu, Hongtao; Graziano, Zachary; Lin, Yu-Shan; Cochran, Jennifer R; Pentelute, Bradley L

    2017-10-31

    Homochirality is a general feature of biological macromolecules, and Nature includes few examples of heterochiral proteins. Herein, we report on the design, chemical synthesis, and structural characterization of heterochiral proteins possessing loops of amino acids of chirality opposite to that of the rest of a protein scaffold. Using the protein Ecballium elaterium trypsin inhibitor II, we discover that selective β-alanine substitution favors the efficient folding of our heterochiral constructs. Solution nuclear magnetic resonance spectroscopy of one such heterochiral protein reveals a homogeneous global fold. Additionally, steered molecular dynamics simulation indicate β-alanine reduces the free energy required to fold the protein. We also find these heterochiral proteins to be more resistant to proteolysis than homochiral l-proteins. This work informs the design of heterochiral protein architectures containing stretches of both d- and l-amino acids.

  19. Vascular lesions of the vocal fold.

    Science.gov (United States)

    Gökcan, Kürşat Mustafa; Dursun, Gürsel

    2009-04-01

    The aim of the study was to present symptoms, laryngological findings, clinical course, management modalities, and consequences of vascular lesions of vocal fold. This study examined 162 patients, the majority professional voice users, with vascular lesions regarding their presenting symptoms, laryngological findings, clinical courses and treatment results. The most common complaint was sudden hoarseness with hemorrhagic polyp. Microlaryngoscopic surgery was performed in 108 cases and the main indication of surgery was the presence of vocal fold mass or development of vocal polyp during clinical course. Cold microsurgery was utilized for removal of vocal fold masses and feeding vessels cauterized using low power, pulsed CO(2) laser. Acoustic analysis of patients revealed a significant improvement of jitter, shimmer and harmonics/noise ratio values after treatment. Depending on our clinical findings, we propose treatment algorithm where voice rest and behavioral therapy is the integral part and indications of surgery are individualized for each patient.

  20. Theoretical and Numerical Study of Seismoelectric Logs for Logging While Drilling (LWD

    Directory of Open Access Journals (Sweden)

    Sun Xiang-Yang

    2017-01-01

    Full Text Available When the acoustic field propagates in the porous medium, the electromagnetic wave can be induced by the seismoelectric effects which can be used in the logging. This paper studies the seismoelectric wave field and deduces the formulations of the acoustic and electromagnetic field of the liquid in the well, and gives the acoustic and electromagnetic boundary conditions between the driller collar and the log liquid, when the driller collar is added. We also do the numerical simulation of the seismoelectric wave field excited by monopole source, study the velocity dispersion characteristics of the acoustic and electromagnetic field, and investigate the detective depth of the seismoelectric logs. Through the simulation we know the seismoelectric logs can avoid the interference of drill collar wave. This paper also provides theoretical guidance for the design of receiving antenna.

  1. Comparative analysis of nuclear magnetic resonance well logging and nuclear magnetic resonance mud logging

    International Nuclear Information System (INIS)

    Yuan Zugui

    2008-01-01

    The hydrogen atoms in oil and water are able to resonate and generate signals in the magnetic field, which is used by the NMR (nuclear magnetic resonance) technology in petroleum engineering to research and evaluate rock characteristics. NMR well logging was used to measure the physical property parameters of the strata in well bore, whereas NMR mud logging was used to analyze (while drilling) the physical property parameters of cores, cuttings and sidewall coring samples on surface (drilling site). Based on the comparative analysis of the porosity and permeability parameters obtained by NMR well logging and those from analysis of the cores, cuttings and sidewall coring samples by NMR mud logging in the same depth of 13 wells, these two methods are of certain difference, but their integral tendency is relatively good. (authors)

  2. Natural triple beta-stranded fibrous folds.

    Science.gov (United States)

    Mitraki, Anna; Papanikolopoulou, Katerina; Van Raaij, Mark J

    2006-01-01

    A distinctive family of beta-structured folds has recently been described for fibrous proteins from viruses. Virus fibers are usually involved in specific host-cell recognition. They are asymmetric homotrimeric proteins consisting of an N-terminal virus-binding tail, a central shaft or stalk domain, and a C-terminal globular receptor-binding domain. Often they are entirely or nearly entirely composed of beta-structure. Apart from their biological relevance and possible gene therapy applications, their shape, stability, and rigidity suggest they may be useful as blueprints for biomechanical design. Folding and unfolding studies suggest their globular C-terminal domain may fold first, followed by a "zipping-up" of the shaft domains. The C-terminal domains appear to be important for registration because peptides corresponding to shaft domains alone aggregate into nonnative fibers and/or amyloid structures. C-terminal domains can be exchanged between different fibers and the resulting chimeric proteins are useful as a way to solve structures of unknown parts of the shaft domains. The following natural triple beta-stranded fibrous folds have been discovered by X-ray crystallography: the triple beta-spiral, triple beta-helix, and T4 short tail fiber fold. All have a central longitudinal hydrophobic core and extensive intermonomer polar and nonpolar interactions. Now that a reasonable body of structural and folding knowledge has been assembled about these fibrous proteins, the next challenge and opportunity is to start using this information in medical and industrial applications such as gene therapy and nanotechnology.

  3. Folding models for elastic and inelastic scattering

    International Nuclear Information System (INIS)

    Satchler, G.R.

    1982-01-01

    The most widely used models are the optical model potential (OMP) for elastic scattering, and its generalization to non-spherical shapes, the deformed optical model potential (DOMP) for inelastic scattering. These models are simple and phenomenological; their parameters are adjusted so as to reproduce empirical data. Nonetheless, there are certain, not always well-defined, constraints to be imposed. The potential shapes and their parameter values must be reasonable and should vary in a smooth and systematic way with the masses of the colliding nuclei and their energy. One way of satisfying these constraints, without going back to a much more fundamental theory, is through the use of folding models. The basic justification for using potentials of the Woods-Saxon shape for nucleon-nucleus scattering, for example, is our knowledge that a nuclear density distribution is more-or-less constant in the nuclear interior with a diffuse surface. When this is folded with a short-range nucleon-nucleon interaction, the result is a similar shape with a more diffuse surface. Folding procedures allow us to incorporate many aspects of nuclear structure (although the nuclear size is one of the most important), as well as theoretical ideas about the effective interaction of two nucleons within nuclear matter. It also provides us with a means of linking information obtained from nuclear (hadronic) interactions with that from other sources, as well as correlating that from the use of different hadronic probes. Folding model potentials, single-folded potentials, and the double-folding model including applications to heavy-ion scattering are discussed

  4. Laryngeal ultrasound and pediatric vocal fold nodules.

    Science.gov (United States)

    Ongkasuwan, Julina; Devore, Danielle; Hollas, Sarah; Jones, Jeremy; Tran, Brandon

    2017-03-01

    The term vocal fold nodules refers to bilateral thickening of the membranous folds with minimal impairment of the vibratory properties of the mucosa. Nodules are thought to be related to repetitive mechanical stress, associated with voice use patterns. Diagnosis is typically made in the office via either rigid or flexible laryngeal stroboscopy. Depending on the individual child, obtaining an optimal view of the larynx can be difficult if not impossible. Recent advances in high-frequency ultrasonography allows for transcervical examination of laryngeal structures. The goal of this project was to determine if laryngeal ultrasound (LUS) can be used to identify vocal fold nodules in dysphonic children. Prospective case-control study in which the patient acted as his or her own control. Forty-six pediatric patients were recruited for participation in this study; the mean age was 4.8 years. Twenty-three did not have any vocal fold lesions and 23 had a diagnosis of vocal fold nodules on laryngeal stroboscopy. Recorded LUSs were reviewed by two pediatric radiologists who were blinded to the nodule status. There was substantial inter-rater agreement (κ = 0.70, 95% confidence interval [CI]: 0.50-0.89) between the two radiologists regarding the presence of nodules. There was also substantial agreement (κ = 0.87, 95% CI: 0.72-1) between LUS and laryngeal stroboscopy. Sensitivity of LUS was 100% (95% CI: 85%-100%) and specificity was 87% (95% CI: 66%-97%). LUS can be used to identify vocal fold nodules in children with substantial agreement with laryngeal stroboscopy. 3b Laryngoscope, 127:676-678, 2017. © 2016 The American Laryngological, Rhinological and Otological Society, Inc.

  5. Survival, persistence, and regeneration of the reindeer lichens, Cladina stellaris, C. rangiferina, and C. mitis following clearcut logging and forest fire in northwestern Ontario

    Directory of Open Access Journals (Sweden)

    Elizabeth T. Webb

    1998-03-01

    Full Text Available The responses of the reindeer lichens (Cladina stellaris, C. rangiferina, and C. mitis to logging and fire were compared in lichen-rich forest stands in northwestern Ontario. In the summer of 1992, reindeer lichen cover, in total and by species, was visually estimated and detailed notes were taken on reindeer lichen conditions, modes of reproduction, and substrate use on 34 undisturbed, burned, or logged sites. While virtually no reindeer lichens survived forest fire, much of the reindeer lichen cover remained after logging. Reindeer lichen cover increased with time since fire. Total reindeer lichen cover was not correlated with time since logging. Fragment growth was found to be an important mode of reproduction on logged sites, and occurred with greater frequency on logged sites than on burned sites. Colonization of organic substrates by reindeer lichens was observed on both logged and burned sites.

  6. Stretching and folding mechanism in foams

    International Nuclear Information System (INIS)

    Tufaile, Alberto; Pedrosa Biscaia Tufaile, Adriana

    2008-01-01

    We have described the stretching and folding of foams in a vertical Hele-Shaw cell containing air and a surfactant solution, from a sequence of upside-down flips. Besides the fractal dimension of the foam, we have observed the logistic growth for the soap film length. The stretching and folding mechanism is present during the foam formation, and this mechanism is observed even after the foam has reached its respective maximum fractal dimension. Observing the motion of bubbles inside the foam, large bubbles present power spectrum associated with random walk motion in both directions, while the small bubbles are scattered like balls in a Galton board

  7. Assessment of thyroplasty for vocal fold paralysis

    DEFF Research Database (Denmark)

    Grøntved, Ågot Møller; Faber, Christian; Jakobsen, John

    2009-01-01

    INTRODUCTION: Thyroplasty with silicone rubber implantation is a surgical procedure for treatment of patients with vocal fold paralysis. The aim of the present study was to evaluate the outcome of the operation and to monitor which of the analyses were the more beneficial. MATERIAL AND METHODS...... because it offers a quantitative measure of the voice capacity and intensity, which are the major problems experienced by patients with vocal fold paralysis. Used together, these tools are highly instrumental in guiding the patient's choice of surgery or no surgery. Udgivelsesdato: 2009-Jan-12...

  8. Stretching and folding mechanism in foams

    Energy Technology Data Exchange (ETDEWEB)

    Tufaile, Alberto [Escola de Artes, Ciencias e Humanidades, Soft Matter Laboratory, Universidade de Sao Paulo, 03828-000 Sao Paulo, SP (Brazil)], E-mail: tufaile@usp.br; Pedrosa Biscaia Tufaile, Adriana [Escola de Artes, Ciencias e Humanidades, Soft Matter Laboratory, Universidade de Sao Paulo, 03828-000 Sao Paulo, SP (Brazil)

    2008-10-13

    We have described the stretching and folding of foams in a vertical Hele-Shaw cell containing air and a surfactant solution, from a sequence of upside-down flips. Besides the fractal dimension of the foam, we have observed the logistic growth for the soap film length. The stretching and folding mechanism is present during the foam formation, and this mechanism is observed even after the foam has reached its respective maximum fractal dimension. Observing the motion of bubbles inside the foam, large bubbles present power spectrum associated with random walk motion in both directions, while the small bubbles are scattered like balls in a Galton board.

  9. CS model coil experimental log book

    Energy Technology Data Exchange (ETDEWEB)

    Nishijima, Gen; Sugimoto, Makoto; Nunoya, Yoshihiko; Wakabayashi, Hiroshi; Tsuji, Hiroshi [Japan Atomic Energy Research Inst., Naka, Ibaraki (Japan). Naka Fusion Research Establishment

    2001-02-01

    Charging test of the ITER CS Model Coil which is the world's largest superconducting pulse coil and the CS Insert Coil had started at April 11, 2000 and had completed at August 18, 2000. In the campaign, total shot numbers were 356 and the size of the data file in the DAS (Data Acquisition System) was over 20 GB. This report is a database that consists of the log list and the log sheets of every shot. One can access the database, make a search, and browse results via Internet (http://1ogwww.naka.jaeri.go.jp). The database will be useful to quick search to choose necessary shots. (author)

  10. High resolution gamma spectroscopy well logging system

    International Nuclear Information System (INIS)

    Giles, J.R.; Dooley, K.J.

    1997-01-01

    A Gamma Spectroscopy Logging System (GSLS) has been developed to study sub-surface radionuclide contamination. The absolute counting efficiencies of the GSLS detectors were determined using cylindrical reference sources. More complex borehole geometries were modeled using commercially available shielding software and correction factors were developed based on relative gamma-ray fluence rates. Examination of varying porosity and moisture content showed that as porosity increases, and as the formation saturation ratio decreases, relative gamma-ray fluence rates increase linearly for all energies. Correction factors for iron and water cylindrical shields were found to agree well with correction factors determined during previous studies allowing for the development of correction factors for type-304 stainless steel and low-carbon steel casings. Regression analyses of correction factor data produced equations for determining correction factors applicable to spectral gamma-ray well logs acquired under non-standard borehole conditions

  11. Well logging system with linearity control

    International Nuclear Information System (INIS)

    Jones, J.M.

    1973-01-01

    Apparatus is described for controlling the gain of a nuclear well logging system comprising: (1) means for measuring the energy spectrum of gamma rays produced by earth formation materials surrounding a well borehole; (2) means for measuring the number of counts of a gamma rays having an energy falling within each of at least two predetermined energy band portions of the gamma ray energy spectrum; (3) means for generating a signal proportional to the ratio of the gamma ray counts and for comparing the ratio signal with at least one constant ratio calibration signal; (4) means for generating an error signal representative of the difference of the ratio signal and the constant ratio calibration signal; and (5) means for using the error signal to control the linearity of the well logging system. (author)

  12. Assessment of radiation safety in well logging

    International Nuclear Information System (INIS)

    Alles, A.; Pérez, Y.; Duménigo, C.

    2015-01-01

    Radiation safety assessments required by current regulations are a means to verify compliance with the requirements. Different methods have been used for this purpose. In the paper the results of applying the method of risk matrices, applied for the first time in the practice of well logging are exposed. For each initiating event frequency of occurrence, the severity of its consequences and the probability of failure of the barriers identified were evaluated. Starting from these assumptions, the risk associated is determined for each of the identified accident sequences, using for this the SEVRRA code 'Risk Assessment System', originally designed for use in radiotherapy. As an result sequences increased risk associated with the practice of well logging were identified, which is the starting point for the further implementation of a coherent program of dose optimization in practice. [es

  13. No chiral truncation of quantum log gravity?

    Science.gov (United States)

    Andrade, Tomás; Marolf, Donald

    2010-03-01

    At the classical level, chiral gravity may be constructed as a consistent truncation of a larger theory called log gravity by requiring that left-moving charges vanish. In turn, log gravity is the limit of topologically massive gravity (TMG) at a special value of the coupling (the chiral point). We study the situation at the level of linearized quantum fields, focussing on a unitary quantization. While the TMG Hilbert space is continuous at the chiral point, the left-moving Virasoro generators become ill-defined and cannot be used to define a chiral truncation. In a sense, the left-moving asymptotic symmetries are spontaneously broken at the chiral point. In contrast, in a non-unitary quantization of TMG, both the Hilbert space and charges are continuous at the chiral point and define a unitary theory of chiral gravity at the linearized level.

  14. Modelo de custos logísticos

    Directory of Open Access Journals (Sweden)

    José Vanderlei Silva Borba

    2010-05-01

    Full Text Available Em contexto de globalização, a distância física entre produtores de bens e de serviços e consumidores deixa de ser relevante. Isso determina que o gerenciamento de custos logísticos venha agregar valor relevante aos produtos comercializados, pois procura identificar e determinar a eficácia dos recursos consumidos internamente pela empresa e, externamente, procura fazer a análise da cadeia de valor. Nessa perspectiva, a definição das variáveis de custos está além de seus muros. Este trabalho propõe um modelo de apuração de custos logísticos, que atenda, simultaneamente, os custos de suprimentos e os custos de distribuição, com impactos sobre o processo de tomada de decisão.

  15. Development of a digital log ratemeter

    International Nuclear Information System (INIS)

    Domienikan, Claudio; Brito, Andreia; Toledo, Fabio de; Zahn, Guilherme S.

    2011-01-01

    A compact log ratemeter that measures and displays an average count rate through a microcomputer is presented. This ratemeter was developed to be used to monitor a laboratory of production of radioactive samples and also for teaching purposes. The main features are log measurement range from .1 to 1.000 counts/sec and adjustable level alarm. The electronic circuit uses a Geiger tube LND7224, and the processed signal is applied to a National Instruments Multifunction I/O USB-6008 connected to a PC through USB input. A program developed in LabView allows storage of data and real-time observation of the rate of radiation evolution. This ratemeter was designed and constructed in the IPEN-CNEN/SP. (author)

  16. Glass scintillator pair for compensation neutron logging

    International Nuclear Information System (INIS)

    Ji Changsong; Li Xuezhi; Yiu Guangduo

    1985-01-01

    Glass scintillator pair types ST 1604 and ST 1605 for compensation of neutron logging is developed. The neutron sensitive material used is multistick lithium glass scintillators 3 and 4 mm in diameter respectively. Thermoneutron detection efficiencies are 50-60% and 100% respectively. The detection efficiency for 60 Co γ ray is lower than 0.3%. The type ST 1604 and ST 1605 may also be used as high sensitive neutron detectors in an intensive γ ray field

  17. Log Gaussian Cox processes on the sphere

    DEFF Research Database (Denmark)

    Pacheco, Francisco Andrés Cuevas; Møller, Jesper

    We define and study the existence of log Gaussian Cox processes (LGCPs) for the description of inhomogeneous and aggregated/clustered point patterns on the d-dimensional sphere, with d = 2 of primary interest. Useful theoretical properties of LGCPs are studied and applied for the description of sky...... positions of galaxies, in comparison with previous analysis using a Thomas process. We focus on simple estimation procedures and model checking based on functional summary statistics and the global envelope test....

  18. Log-Concavity Properties of Minkowski Valuations

    OpenAIRE

    Berg, Astrid; Parapatits, Lukas; Schuster, Franz E.; Weberndorfer, Manuel

    2014-01-01

    New Orlicz Brunn-Minkowski inequalities are established for rigid motion compatible Minkowski valuations of arbitrary degree. These extend classical log-concavity properties of intrinsic volumes and generalize seminal results of Lutwak and others. Two different approaches which refine previously employed techniques are explored. It is shown that both lead to the same class of Minkowski valuations for which these inequalities hold. An appendix by Semyon Alesker contains the proof of a new clas...

  19. Methods for calibrating radioactivity well logging tools

    International Nuclear Information System (INIS)

    Waggoner, J.A.; Turcotte, R.E.; Hunt-Grubbe, R.H.

    1981-01-01

    Field-calibrating of well-logging tools is achieved by means of a sleeve, which has radioactive material distributed therein, and which envelopes the portion of the tool housing containing the detector. Accurate calibration can be performed and the source can be made considerably weaker than those now in use as it can be brought very close to the detector thus lessening errors. (U.K.)

  20. SDSS Log Viewer: visual exploratory analysis of large-volume SQL log data

    Science.gov (United States)

    Zhang, Jian; Chen, Chaomei; Vogeley, Michael S.; Pan, Danny; Thakar, Ani; Raddick, Jordan

    2012-01-01

    User-generated Structured Query Language (SQL) queries are a rich source of information for database analysts, information scientists, and the end users of databases. In this study a group of scientists in astronomy and computer and information scientists work together to analyze a large volume of SQL log data generated by users of the Sloan Digital Sky Survey (SDSS) data archive in order to better understand users' data seeking behavior. While statistical analysis of such logs is useful at aggregated levels, efficiently exploring specific patterns of queries is often a challenging task due to the typically large volume of the data, multivariate features, and data requirements specified in SQL queries. To enable and facilitate effective and efficient exploration of the SDSS log data, we designed an interactive visualization tool, called the SDSS Log Viewer, which integrates time series visualization, text visualization, and dynamic query techniques. We describe two analysis scenarios of visual exploration of SDSS log data, including understanding unusually high daily query traffic and modeling the types of data seeking behaviors of massive query generators. The two scenarios demonstrate that the SDSS Log Viewer provides a novel and potentially valuable approach to support these targeted tasks.

  1. Estimation of the non records logs from existing logs using artificial neural networks

    Directory of Open Access Journals (Sweden)

    Mehdi Mohammad Salehi

    2017-12-01

    Full Text Available Finding the information of the hydrocarbon reservoirs from well logs is one of the main objectives of the engineers. But, missing the log records (due to many reasons such as broken instruments, unsuitable borehole and etc. is a major challenge to achieve it. Prediction of the density and resistivity logs (Rt, DT and LLS from the conventional wire-line logs in one of the Iranian southwest oil fields is the main purpose of this study. Multilayer neural network was applied to develop an intelligent predictive model for prediction of the logs. A total of 3000 data sets from 3 wells (A, B and C of the studied field were used. Among them, the data of A, B and C wells were used to constructing and testing the model, respectively. To evaluate the performance of the model, the mean square error (MSE and correlation coefficient (R2 in the test data were calculated. A comparison between the MSE of the proposed model and recently intelligent models shows that the proposed model is more accurate than others. Acceptable accuracy and using conventional well logging data are the highlight advantages of the proposed intelligent model.

  2. Chiral gravity, log gravity, and extremal CFT

    International Nuclear Information System (INIS)

    Maloney, Alexander; Song Wei; Strominger, Andrew

    2010-01-01

    We show that the linearization of all exact solutions of classical chiral gravity around the AdS 3 vacuum have positive energy. Nonchiral and negative-energy solutions of the linearized equations are infrared divergent at second order, and so are removed from the spectrum. In other words, chirality is confined and the equations of motion have linearization instabilities. We prove that the only stationary, axially symmetric solutions of chiral gravity are BTZ black holes, which have positive energy. It is further shown that classical log gravity--the theory with logarithmically relaxed boundary conditions--has finite asymptotic symmetry generators but is not chiral and hence may be dual at the quantum level to a logarithmic conformal field theories (CFT). Moreover we show that log gravity contains chiral gravity within it as a decoupled charge superselection sector. We formally evaluate the Euclidean sum over geometries of chiral gravity and show that it gives precisely the holomorphic extremal CFT partition function. The modular invariance and integrality of the expansion coefficients of this partition function are consistent with the existence of an exact quantum theory of chiral gravity. We argue that the problem of quantizing chiral gravity is the holographic dual of the problem of constructing an extremal CFT, while quantizing log gravity is dual to the problem of constructing a logarithmic extremal CFT.

  3. Gerencia logística y global

    Directory of Open Access Journals (Sweden)

    Pablo Cesar Ocampo Vélez

    2009-04-01

    Full Text Available La logística es una filosofía que se encarga de aplicar las buenas pá¡cticas en los macroprocesos, procesos, procedimientos, tareas y productos dentro de una organización, con el fin de satisfacer las necesidades del cliente, quien es la razón de ser de la empresa. Existen entes internacionales que velan porque las compañias en todo el mundo utilicen y difundan las diferentes disciplinas logísticas en toda la red de valor y tengan un mismo enfoque estratégico.El objetivo de este artículo es explicar la existencia de procesos y macroprocesos de clase mundial en la logística, gracias a los cuales hay una gran oportunidad de mejora para los empresarios colombianos, con el fin de reestructurar los procesos estratégicos, tácticos y operacionales de cada Unidad de Negocio, para que sean organizaciones más competitivas, que puedan enfrentar los tratados de libre comercio, brindando mayor sostenibilidad y óptimo nivel de servicio.

  4. A history of nuclear well logging in the oil industry

    International Nuclear Information System (INIS)

    Tittle, C.W.

    1989-01-01

    Spurred by an interest in logging through steel casing γ-ray logging began in the late 1930s followed soon by neutron logging for porosity. These were the first two nuclear well logs. Gamma-gamma density logging was developed during the 1950s. Pulsed neutron lifetime logging appeared in the 1960s; the slim tools came in the early 1970s. Developments since then have included dual detector devices of several types which offered improved measurements or interpretation, γ-ray spectrometry logging (natural and neutron-induced) which identifies certain chemical elements, induced radioactivity logging, and the photoelectric absorption log, which, combined with the density log in a single tool, is known as litho-density logging. A combination of several γ-ray spectrometers in one tool, designed to determine 10 formation elements, was recently introduced, and a new neutron porosity tool measuring epithermal neutron die-away time has been developed. Digital transmission of logging data was a step forward in about 1975. Also, log interpretation techniques have greatly expanded since the advent of digital computers, and the microcomputer has had a distinct impact. It is now practical and economical to do iterative analysis on a suite of logs to obtain an optimum overall interpretation. (author)

  5. Folding of multidomain proteins: biophysical consequences of tethering even in apparently independent folding.

    Science.gov (United States)

    Arviv, Oshrit; Levy, Yaakov

    2012-12-01

    Most eukaryotic and a substantial fraction of prokaryotic proteins are composed of more than one domain. The tethering of these evolutionary, structural, and functional units raises, among others, questions regarding the folding process of conjugated domains. Studying the folding of multidomain proteins in silico enables one to identify and isolate the tethering-induced biophysical determinants that govern crosstalks generated between neighboring domains. For this purpose, we carried out coarse-grained and atomistic molecular dynamics simulations of two two-domain constructs from the immunoglobulin-like β-sandwich fold. Each of these was experimentally shown to behave as the "sum of its parts," that is, the thermodynamic and kinetic folding behavior of the constituent domains of these constructs seems to occur independently, with the folding of each domain uncoupled from the folding of its partner in the two-domain construct. We show that the properties of the individual domains can be significantly affected by conjugation to another domain. The tethering may be accompanied by stabilizing as well as destabilizing factors whose magnitude depends on the size of the interface, the length, and the flexibility of the linker, and the relative stability of the domains. Accordingly, the folding of a multidomain protein should not be viewed as the sum of the folding patterns of each of its parts, but rather, it involves abrogating several effects that lead to this outcome. An imbalance between these effects may result in either stabilization or destabilization owing to the tethering. Copyright © 2012 Wiley Periodicals, Inc.

  6. A comparison of RNA folding measures

    DEFF Research Database (Denmark)

    Freyhult, E.; Gardner, P. P.; Moulton, V.

    2005-01-01

    the behaviour of these measures over a large range of Rfam ncRNA families. Such measures can be useful in, for example, identifying novel ncRNAs, and indicating the presence of alternate RNA foldings. Results Our analysis shows that ncRNAs, but not mRNAs, in general have lower minimal free energy (MFE) than....... Conclusion Due to the correlations between the different measures we find that it is sufficient to use only two of them in RNA folding studies, one to test if the sequence in question has lower energy than a random sequence with the same dinucleotide frequency (the Z-score) and the other to see......Background In the last few decades there has been a great deal of discussion concerning whether or not noncoding RNA sequences (ncRNAs) fold in a more well-defined manner than random sequences. In this paper, we investigate several existing measures for how well an RNA sequence folds, and compare...

  7. Mapping the universe of RNA tetraloop folds

    DEFF Research Database (Denmark)

    Bottaro, Sandro; Lindorff-Larsen, Kresten

    2017-01-01

    We report a map of RNA tetraloop conformations constructed by calculating pairwise distances among all experimentally determined four-nucleotide hairpin loops. Tetraloops with similar structures are clustered together and, as expected, the two largest clusters are the canonical GNRA and UNCG fold...

  8. Fold in Origami and Unfold Math

    Science.gov (United States)

    Georgeson, Joseph

    2011-01-01

    Students enjoy origami and like making everything from paper cranes to footballs out of small, colorful squares of paper. They can invent their own shapes and are intrigued by the polyhedrons that they can construct. Paper folding is fun, but where is the math? Unless teachers develop lessons that address mathematical objectives, origami could be…

  9. Self-folding graphene-polymer bilayers

    Energy Technology Data Exchange (ETDEWEB)

    Deng, Tao [Institute of Microelectronics, Tsinghua University, Beijing 100084 (China); Department of Chemical and Biomolecular Engineering, Johns Hopkins University, Baltimore, Maryland 21218 (United States); Yoon, ChangKyu [Department of Materials Science and Engineering, Johns Hopkins University, Baltimore, Maryland 21218 (United States); Jin, Qianru [Department of Chemical and Biomolecular Engineering, Johns Hopkins University, Baltimore, Maryland 21218 (United States); Li, Mingen [Department of Physics, Johns Hopkins University, Baltimore, Maryland 21218 (United States); Liu, Zewen [Institute of Microelectronics, Tsinghua University, Beijing 100084 (China); Gracias, David H., E-mail: dgracias@jhu.edu [Department of Materials Science and Engineering, Johns Hopkins University, Baltimore, Maryland 21218 (United States); Department of Chemical and Biomolecular Engineering, Johns Hopkins University, Baltimore, Maryland 21218 (United States)

    2015-05-18

    In order to incorporate the extraordinary intrinsic thermal, electrical, mechanical, and optical properties of graphene with three dimensional (3D) flexible substrates, we introduce a solvent-driven self-folding approach using graphene-polymer bilayers. A polymer (SU-8) film was spin coated atop chemically vapor deposited graphene films on wafer substrates and graphene-polymer bilayers were patterned with or without metal electrodes using photolithography, thin film deposition, and etching. After patterning, the bilayers were released from the substrates and they self-folded to form fully integrated, curved, and folded structures. In contrast to planar graphene sensors on rigid substrates, we assembled curved and folded sensors that are flexible and they feature smaller form factors due to their 3D geometry and large surface areas due to their multiple rolled architectures. We believe that this approach could be used to assemble a range of high performance 3D electronic and optical devices of relevance to sensing, diagnostics, wearables, and energy harvesting.

  10. Targeted transtracheal stimulation for vocal fold closure.

    Science.gov (United States)

    Hadley, Aaron J; Thompson, Paul; Kolb, Ilya; Hahn, Elizabeth C; Tyler, Dustin J

    2014-06-01

    Paralysis of the structures in the head and neck due to stroke or other neurological disorder often causes dysphagia (difficulty in swallowing). Patients with dysphagia have a significantly higher incidence of aspiration pneumonia and death. The recurrent laryngeal nerve (RLN), which innervates the intrinsic laryngeal muscles that control the vocal folds, travels superiorly in parallel to the trachea in the tracheoesophageal groove. This study tests the hypothesis that functional electrical stimulation (FES) applied via transtracheal electrodes can produce controlled vocal fold adduction. Bipolar electrodes were placed at 15° intervals around the interior mucosal surface of the canine trachea, and current was applied to the tissue while electromyography (EMG) from the intrinsic laryngeal muscles and vocal fold movement visualization via laryngoscopy were recorded. The lowest EMG thresholds were found at an average location of 100° to the left of the ventral midsagittal line and 128° to the right. A rotatable pair of bipolar electrodes spaced 230° apart were able to stimulate bilaterally both RLNs in every subject. Laryngoscopy showed complete glottal closure with transtracheal stimulation in six of the eight subjects, and this closure was maintained under simultaneous FES-induced laryngeal elevation. Transtracheal stimulation is an effective tool for minimally invasive application of FES to induce vocal fold adduction, providing an alternative mechanism to study airway protection.

  11. Amylose folding under the influence of lipids

    NARCIS (Netherlands)

    Lopez, Cesar A.; de Vries, Alex H.; Marrink, Siewert J.

    2012-01-01

    The molecular dynamics simulation technique was used to study the folding and complexation process of a short amylose fragment in the presence of lipids. In aqueous solution, the amylose chain remains as an extended left-handed helix. After the addition of lipids in the system, however, we observe

  12. MARATHON DESPITE UNILATERAL VOCAL FOLD PARALYSIS

    Directory of Open Access Journals (Sweden)

    Matthias Echternach

    2008-06-01

    Full Text Available The principal symptoms of unilateral vocal fold paralysis are hoarseness and difficulty in swallowing. Dyspnea is comparatively rare (Laccourreye et al., 2003. The extent to which unilateral vocal fold paralysis may lead to respiratory problems at all - in contrast to bilateral vocal fold paralysis- has not yet well been determined. On the one hand, inspiration is impaired with unilateral vocal fold paralysis; on the other hand, neither the position of the vocal fold paralysis nor the degree of breathiness correlates with respiratory parameters (Cantarella et al., 2003; 2005. The question of what respiratory stress a patient with a vocal fold paresis can endure has not yet been dealt with.A 43 year-old female patient was suffering from recurrent unspecific respiratory complaints for four months after physical activity. During training for a marathon, she experienced no difficulty in breathing. These unspecific respiratory complaints occurred only after athletic activity and persisted for hours. The patient observed neither an increased coughing nor a stridor. Her voice remained unaltered during the attacks, nor were there any signs of a symptomatic gastroesophageal reflux or infectious disease. A cardio-pulmonary and a radiological examination by means of an X-ray of the thorax also revealed no pathological phenomena. As antiallergic and antiobstructive therapy remained unsuccessful, a laryngological examination was performed in order to exclude a vocal cord dysfunction.Surprisingly enough, the laryngostroboscopy showed, as an initial description, a vocal fold paralysis of the left vocal fold in median position (Figure 1. The anamnestic background for the cause was unclear. The only clue was a thoracotomy on the left side due to a pleuritis in childhood. A subsequent laryngoscopic examination had never been performed. Good mucosa waves and amplitudes were shown bilateral with complete glottal closure. Neither in the acoustic analysis, nor in the

  13. Towards a systematic classification of protein folds

    DEFF Research Database (Denmark)

    Lindgård, Per-Anker; Bohr, Henrik

    1997-01-01

    structures are given a unique name, which simultaneously represent a linear string of physical coupling constants describing hinge spin interactions. We have defined a metric and a precise distance measure between the fold classes. An automated procedure is constructed in which any protein structure...

  14. Vocal fold submucosal infusion technique in phonomicrosurgery.

    Science.gov (United States)

    Kass, E S; Hillman, R E; Zeitels, S M

    1996-05-01

    Phonomicrosurgery is optimized by maximally preserving the vocal fold's layered microstructure (laminae propriae). The technique of submucosal infusion of saline and epinephrine into the superficial lamina propria (SLP) was examined to delineate how, when, and why it was helpful toward this surgical goal. A retrospective review revealed that the submucosal infusion technique was used to enhance the surgery in 75 of 152 vocal fold procedures that were performed over the last 2 years. The vocal fold epithelium was noted to be adherent to the vocal ligament in 29 of the 75 cases: 19 from previous surgical scarring, 4 from cancer, 3 from sulcus vocalis, 2 from chronic hemorrhage, and 1 from radiotherapy. The submucosal infusion technique was most helpful when the vocal fold epithelium required resection and/or when extensive dissection in the SLP was necessary. The infusion enhanced the surgery by vasoconstriction of the microvasculature in the SLP, which improved visualization during cold-instrument tangential dissection. Improved visualization facilitated maximal preservation of the SLP, which is necessary for optimal pliability of the overlying epithelium. The infusion also improved the placement of incisions at the perimeter of benign, premalignant, and malignant lesions, and thereby helped preserve epithelium uninvolved by the disorder.

  15. Unification of acoustic drillhole logging data

    International Nuclear Information System (INIS)

    Oehman, I.; Palmen, J.; Heikkinen, E.

    2009-04-01

    Posiva Oy prepares for disposal of spent nuclear fuel in bedrock in Olkiluoto, Eurajoki. This is in accordance of the application filed in 1999, the Decision-in-Principle of the State Council in 2000, and ratification by the Parliament in 2001. The site characterization at Olkiluoto has included comprehensive geological, hydrological, geochemical and geophysical investigations airborne, on ground and in drillholes since 1988. One of key techniques in geophysical drillhole surveys has been acoustic full waveform logging, which has been implemented since 1994. Various tools have been used in acquisition of acoustic data and several processing techniques have been applied. The logging work and processing to P and S wave velocities has been previously carried out on single drillhole basis. Comparisons to actual values and levels have not been made, and the results have not been calibrated. Therefore results for different drillholes have not been comparable. Resolution of the P and S wave velocity has been rather coarse, and depth correlation to the core data has been on tentative level. As the investigation data has been accumulating, it has become possible to correlate the results to geological and laboratory control data and to calibrate the results of separate measurement campaigns and different drillholes together onto same reference level and resolution. The presented technique has been applied for drillhole OL-KR29 onwards and has set the processing standard, settings and reference levels for later surveys. This approach will further assist the application of the method for mapping and numerical description of lithology variation and possible effect of alteration and deformation on it. Further on, the P and S wave velocity data together with density can be used in computing of dynamic in situ rock mechanical parameters, and possibly in correlating rock strength laboratory data to P and S wave velocity logging data. The acoustic logging data from drillholes OL-KR1

  16. Folding and Fracturing of Rocks: the background

    Science.gov (United States)

    Ramsay, John G.

    2017-04-01

    This book was generated by structural geology teaching classes at Imperial College. I was appointed lecturer during 1957 and worked together with Dr Gilbert Wilson teaching basic structural geology at B.Sc level. I became convinced that the subject, being essentially based on geometric field observations, required a firm mathematical basis for its future development. In particular it seemed to me to require a very sound understanding of stress and strain. My field experience suggested that a knowledge of two- and three-demensional strain was critical in understanding natural tectonic processes. I found a rich confirmation for this in early publications of deformed fossils, oolitic limestones and spotted slates made by several geologists around the beginning of the 20th century (Sorby, Philips, Haughton, Harker) often using surprisingly sophisticated mathematical methods. These methods were discussed and elaborated in Folding and Fracturing of Rocks in a practical way. The geometric features of folds were related to folding mechanisms and the fold related small scale structures such as cleavage, schistosity and lineation explained in terms of rock strain. My work in the Scottish Highlands had shown just how repeated fold superposition could produce very complex geometric features, while further work in other localities suggested that such geometric complications are common in many orogenic zones. From the development of structural geological studies over the past decades it seems that the readers of this book have found many of the ideas set out are still of practical application. The mapping of these outcrop-scale structures should be emphasised in all field studies because they can be seen as ''fingerprints'' of regional scale tectonic processes. My own understanding of structural geology has been inspired by field work and I am of the opinion that future progress in understanding will be likewise based on careful observation and measurement of the features of

  17. ETIOLOGICAL FACTORS FOR VOCAL FOLD POLYP FORMATION

    Directory of Open Access Journals (Sweden)

    DAŠA GLUVAJIĆ

    2016-05-01

    Full Text Available Background: Vocal fold polyp is one of the most common causes for hoarseness. Many different etiological factors contribute to vocal fold polyp formation. The aim of the study was to find out whether the etiological factors for polyp formation have changed in the last 30 years.Methods: Eighty-one patients with unilateral vocal fold polyp were included in the study. A control group was composed of 50 volunteers without voice problems who matched the patients by age and gender. The data about etiological factors and the findings of phoniatric examination were obtained from the patients' medical documentation and from the questionnaires for the control group. The incidence of etiological factors was compared between the two groups. The program SPSS, Version 18 was used for statistical analysis.Results: The most frequent etiological factors were occupational voice load, GER, allergy and smoking. In 79% of patients 2 – 6 contemporary acting risk factors were found. Occupational voice load (p=0,018 and GER (p=0,004 were significantly more frequent in the patients than in the controls. The other factors did not significantly influence the polyp formation.Conclusions: There are several factors involved simultaneously in the formation of vocal fold polyps both nowadays and 30 years ago. Some of the most common factors remain the same (voice load, smoking, others are new (GER, allergy, which is probably due to the different lifestyle and working conditions than 30 years ago. Occupational voice load and GER were significantly more frequently present in the patients with polyp than in the control group. Regarding the given results it is important to instruct workers with professional vocal load about etiological factors for vocal fold polyp formation.

  18. Inverse folding of RNA pseudoknot structures

    Directory of Open Access Journals (Sweden)

    Li Linda YM

    2010-06-01

    Full Text Available Abstract Background RNA exhibits a variety of structural configurations. Here we consider a structure to be tantamount to the noncrossing Watson-Crick and G-U-base pairings (secondary structure and additional cross-serial base pairs. These interactions are called pseudoknots and are observed across the whole spectrum of RNA functionalities. In the context of studying natural RNA structures, searching for new ribozymes and designing artificial RNA, it is of interest to find RNA sequences folding into a specific structure and to analyze their induced neutral networks. Since the established inverse folding algorithms, RNAinverse, RNA-SSD as well as INFO-RNA are limited to RNA secondary structures, we present in this paper the inverse folding algorithm Inv which can deal with 3-noncrossing, canonical pseudoknot structures. Results In this paper we present the inverse folding algorithm Inv. We give a detailed analysis of Inv, including pseudocodes. We show that Inv allows to design in particular 3-noncrossing nonplanar RNA pseudoknot 3-noncrossing RNA structures-a class which is difficult to construct via dynamic programming routines. Inv is freely available at http://www.combinatorics.cn/cbpc/inv.html. Conclusions The algorithm Inv extends inverse folding capabilities to RNA pseudoknot structures. In comparison with RNAinverse it uses new ideas, for instance by considering sets of competing structures. As a result, Inv is not only able to find novel sequences even for RNA secondary structures, it does so in the context of competing structures that potentially exhibit cross-serial interactions.

  19. Pentachlorophenol measurements in body fluids of people in log homes and workplaces

    Energy Technology Data Exchange (ETDEWEB)

    Cline, R.E.; Hill, R.H. Jr.; Phillips, D.L.; Needham, L.L.

    1989-07-01

    Human exposure to pentachlorophenol (PCP) was evaluated in the normal population (controls), residents of PCP-treated log homes, and persons exposed primarily in the workplace. Blood and urine samples were analyzed by gas chromatography after extraction and acetylation. For 34 controls, serum PCP values ranged from 15-75 ppb with a mean of 40 ppb. For 123 residents of log homes, serum levels ranged from 69-1,340 ppb with a mean of 420 ppb. In such homes, serum levels for children were significantly higher than those for parents, averaging 1.8 times greater. Serum and urine values for workers varied widely, depending on the workplace, with serum levels ranging from 26 to 84,900 ppb of PCP. Urinary concentrations when corrected for creatinine values correlated well (r = 0.92) with serum concentrations. Coating PCP-treated logs of home interiors with a sealant reduced serum PCP levels in the residents.

  20. Improving protein fold recognition by extracting fold-specific features from predicted residue-residue contacts.

    Science.gov (United States)

    Zhu, Jianwei; Zhang, Haicang; Li, Shuai Cheng; Wang, Chao; Kong, Lupeng; Sun, Shiwei; Zheng, Wei-Mou; Bu, Dongbo

    2017-12-01

    Accurate recognition of protein fold types is a key step for template-based prediction of protein structures. The existing approaches to fold recognition mainly exploit the features derived from alignments of query protein against templates. These approaches have been shown to be successful for fold recognition at family level, but usually failed at superfamily/fold levels. To overcome this limitation, one of the key points is to explore more structurally informative features of proteins. Although residue-residue contacts carry abundant structural information, how to thoroughly exploit these information for fold recognition still remains a challenge. In this study, we present an approach (called DeepFR) to improve fold recognition at superfamily/fold levels. The basic idea of our approach is to extract fold-specific features from predicted residue-residue contacts of proteins using deep convolutional neural network (DCNN) technique. Based on these fold-specific features, we calculated similarity between query protein and templates, and then assigned query protein with fold type of the most similar template. DCNN has showed excellent performance in image feature extraction and image recognition; the rational underlying the application of DCNN for fold recognition is that contact likelihood maps are essentially analogy to images, as they both display compositional hierarchy. Experimental results on the LINDAHL dataset suggest that even using the extracted fold-specific features alone, our approach achieved success rate comparable to the state-of-the-art approaches. When further combining these features with traditional alignment-related features, the success rate of our approach increased to 92.3%, 82.5% and 78.8% at family, superfamily and fold levels, respectively, which is about 18% higher than the state-of-the-art approach at fold level, 6% higher at superfamily level and 1% higher at family level. An independent assessment on SCOP_TEST dataset showed consistent

  1. Generalized localization for the double trigonometric Fourier series and the Walsh-Fourier series of functions in L log +L log + log +L

    International Nuclear Information System (INIS)

    Bloshanskaya, S K; Bloshanskii, I L; Roslova, T Y

    1998-01-01

    For an arbitrary open set Ω subset of I 2 =[0,1) 2 and an arbitrary function f element of L log + L log + log + L(I 2 ) such that f=0 on Ω the double Fourier series of f with respect to the trigonometric system Ψ=E and the Walsh-Paley system Ψ=W is shown to converge to zero (over rectangles) almost everywhere on Ω. Thus, it is proved that generalized localization almost everywhere holds on arbitrary open subsets of the square I 2 for the double trigonometric Fourier series and the Walsh-Fourier series of functions in the class L log + L log + log + L (in the case of summation over rectangles). It is also established that such localization breaks down on arbitrary sets that are not dense in I 2 , in the classes Φ Ψ (L)(I 2 ) for the orthonormal system Ψ=E and an arbitrary function such that Φ E (u)=o(u log + log + u) as u→∞ or for Φ W (u)=u( log + log + u) 1-ε , 0<ε<1

  2. Permeability log using new lifetime measurements

    International Nuclear Information System (INIS)

    Dowling, D.J.; Boyd, J.F.; Fuchs, J.A.

    1975-01-01

    Comparative measurements of thermal neutron decay time are obtained for a formation after irradiation with a pulsed neutron source. Chloride ions in formation fluids are concentrated by the electrosmosis effect using charged poles on a well logging sonde. The formation is irradiated with fast neutrons and a first comparative measure of the thermal neutron decay time or neutron lifetime is taken. The chloride ions are then dispersed by acoustic pumping with a magnetostrictive transducer. The formation is then again irradiated with fast neutrons and a comparative measure of neutron lifetime is taken. The comparison is a function of the variation in chloride concentration between the two measurements which is related to formation permeability

  3. Pulsed neutron source well logging system

    International Nuclear Information System (INIS)

    Dillingham, M.E.

    1975-01-01

    A pulsed neutron source arrangement is provided in which a sealed cylindrical chamber encloses a rotatable rotor member carrying a plurality of elongated target strips of material which emits neutrons when bombarded with alpha particles emitted by the plurality of source material strips. The rotor may be locked in a so-called ON position by an electromagnetic clutch drive mechanism controllable from the earth's surface so as to permit the making of various types of logs utilizing a continuously emitting neutron source. (Patent Office Record)

  4. On conditional independence and log-convexity

    Czech Academy of Sciences Publication Activity Database

    Matúš, František

    2012-01-01

    Roč. 48, č. 4 (2012), s. 1137-1147 ISSN 0246-0203 R&D Projects: GA AV ČR IAA100750603; GA ČR GA201/08/0539 Institutional support: RVO:67985556 Keywords : Conditional independence * Markov properties * factorizable distributions * graphical Markov models * log-convexity * Gibbs- Markov equivalence * Markov fields * Gaussian distributions * positive definite matrices * covariance selection model Subject RIV: BA - General Mathematics Impact factor: 0.933, year: 2012 http://library.utia.cas.cz/separaty/2013/MTR/matus-0386229.pdf

  5. New radio meteor detecting and logging software

    Science.gov (United States)

    Kaufmann, Wolfgang

    2017-08-01

    A new piece of software ``Meteor Logger'' for the radio observation of meteors is described. It analyses an incoming audio stream in the frequency domain to detect a radio meteor signal on the basis of its signature, instead of applying an amplitude threshold. For that reason the distribution of the three frequencies with the highest spectral power are considered over the time (3f method). An auto notch algorithm is developed to prevent the radio meteor signal detection from being jammed by a present interference line. The results of an exemplary logging session are discussed.

  6. Zope based electronic operation log system - Zlog

    International Nuclear Information System (INIS)

    Yoshii, K.; Satoh, Y.; Kitabayashi, T.

    2004-01-01

    Since January 2004, the Zope based electronic operation logging system, named Zlog, has been running at the KEKB and AR accelerator facilities. Since Zope is the python based open source web application server software and python language is familiar for the members in the KEKB accelerator control group, we have developed the Zlog system rapidly. In this paper, we report the development history and the present status of Zlog system. Also we show some general plug-in components, called Zope products, have been useful for our Zlog development. (author)

  7. Greater trochanteric pain syndrome diagnosis and treatment.

    Science.gov (United States)

    Mallow, Michael; Nazarian, Levon N

    2014-05-01

    Lateral hip pain, or greater trochanteric pain syndrome, is a commonly seen condition; in this article, the relevant anatomy, epidemiology, and evaluation strategies of greater trochanteric pain syndrome are reviewed. Specific attention is focused on imaging of this syndrome and treatment techniques, including ultrasound-guided interventions. Copyright © 2014 Elsevier Inc. All rights reserved.

  8. Well logging. Acquisition and applications; Diagraphies. Acquisition et applications

    Energy Technology Data Exchange (ETDEWEB)

    Serra, O.; Serra, L.

    2001-07-01

    This reference book on wire-line and LWD well logging covers all geophysical methods of underground survey in a synthetic, visual and dynamical way. It treats of: the physical principle of well logging measurements, the different types of existing probes, the factors that can influence the measurements, and the applications of these measurements. The following well-logging methods are reviewed: resistivity; electromagnetic wave propagation; magnetic susceptibility and magnetic field; spontaneous potential; nuclear logging: natural gamma radioactivity, density logging, photoelectric index, neutron emission probes, hydrogen index or neutron porosity, neutron induced gamma spectroscopy, neutron relaxation time, NMR; acoustic measurements: sonic logging, seismic profiles; texture, structure and stratigraphy data acquisition; borehole diameter measurement; temperature measurement; wire sampling methods; place and role of well-logging in petroleum exploration; well-logging programs. (J.S.)

  9. Shiitake mushroom production on small diameter oak logs in Ohio

    Science.gov (United States)

    S.M. Bratkovich

    1991-01-01

    Yields of different strains of shiitake mushrooms (Lentinus edodes) were evaluated when produced on small diameter oak logs in Ohio. Logs averaging between 3-4 inches in diameter were inoculated with four spawn strains in 1985.

  10. Ca-Dependent Folding of Human Calumenin

    Science.gov (United States)

    Mazzorana, Marco; Hussain, Rohanah; Sorensen, Thomas

    2016-01-01

    Human calumenin (hCALU) is a six EF-hand protein belonging to the CREC family. As other members of the family, it is localized in the secretory pathway and regulates the activity of SERCA2a and of the ryanodine receptor in the endoplasmic reticulum (ER). We have studied the effects of Ca2+ binding to the protein and found it to attain a more compact structure upon ion binding. Circular Dichroism (CD) measurements suggest a major rearrangement of the protein secondary structure, which reversibly switches from disordered at low Ca2+ concentrations to predominantly alpha-helical when Ca2+ is added. SAXS experiments confirm the transition from an unfolded to a compact structure, which matches the structural prediction of a trilobal fold. Overall our experiments suggest that calumenin is a Ca2+ sensor, which folds into a compact structure, capable of interacting with its molecular partners, when Ca2+ concentration within the ER reaches the millimolar range. PMID:26991433

  11. Self-folding micropatterned polymeric containers.

    Science.gov (United States)

    Azam, Anum; Laflin, Kate E; Jamal, Mustapha; Fernandes, Rohan; Gracias, David H

    2011-02-01

    We demonstrate self-folding of precisely patterned, optically transparent, all-polymeric containers and describe their utility in mammalian cell and microorganism encapsulation and culture. The polyhedral containers, with SU-8 faces and biodegradable polycaprolactone (PCL) hinges, spontaneously assembled on heating. Self-folding was driven by a minimization of surface area of the liquefying PCL hinges within lithographically patterned two-dimensional (2D) templates. The strategy allowed for the fabrication of containers with variable polyhedral shapes, sizes and precisely defined porosities in all three dimensions. We provide proof-of-concept for the use of these polymeric containers as encapsulants for beads, chemicals, mammalian cells and bacteria. We also compare accelerated hinge degradation rates in alkaline solutions of varying pH. These optically transparent containers resemble three-dimensional (3D) micro-Petri dishes and can be utilized to sustain, monitor and deliver living biological components.

  12. Dynamics in thin folded polymer films

    Science.gov (United States)

    Croll, Andrew; Rozairo, Damith

    Origami and Kirigami inspired structures depend on a complex interplay between geometry and material properties. While clearly important to the overall function, very little attention has focused on how extreme curvatures and singularities in real materials influence the overall dynamic behaviour of folded structures. In this work we use a set of three polymer thin films in order to closely examine the interaction of material and geometry. Specifically, we use polydimethylsiloxane (PDMS), polystyrene (PS) and polycarbonate (PC) thin films which we subject to loading in several model geometries of varying complexity. Depending on the material, vastly different responses are noted in our experiments; D-cones can annihilate, cut or lead to a crumpling cascade when pushed through a film. Remarkably, order can be generated with additional perturbation. Finally, the role of adhesion in complex folded structures can be addressed. AFOSR under the Young Investigator Program (FA9550-15-1-0168).

  13. Folding pathways explored with artificial potential functions

    International Nuclear Information System (INIS)

    Ulutaş, B; Bozma, I; Haliloglu, T

    2009-01-01

    This paper considers the generation of trajectories to a given protein conformation and presents a novel approach based on artificial potential functions—originally proposed for multi-robot navigation. The artificial potential function corresponds to a simplified energy model, but with the novelty that—motivated by work on robotic navigation—a nonlinear compositional scheme of constructing the energy model is adapted instead of an additive formulation. The artificial potential naturally gives rise to a dynamic system for the protein structure that ensures collision-free motion to an equilibrium point. In cases where the equilibrium point is the native conformation, the motion trajectory corresponds to the folding pathway. This framework is used to investigate folding in a variety of protein structures, and the results are compared with those of other approaches including experimental studies

  14. Folded membrane dialyzer with mechanically sealed edges

    Energy Technology Data Exchange (ETDEWEB)

    Markley, F.W.

    A semipermeable membrane is folded in accordion fashion to form a stack of pleats and the edges are sealed so as to isolate the opposite surfaces of the membrane. The stack is contained within a case that provides ports for flow of blood in contact with one surface of the membrane through channels formed by the pleats and also provides ports for flow of a dialysate through channels formed by the pleats in contact with the other surface of the membrane. The serpentine side edges of the membrane are sealed by a solidified plastic material, whereas effective mechanical means are provided to seal the end edges of the folded membrane. The mechanical means include a clamping strip which biases case sealing flanges into a sealed relationship with end portions of the membrane near the end edges, which portions extend from the stack and between the sealing flanges.

  15. PREFACE Protein folding: lessons learned and new frontiers Protein folding: lessons learned and new frontiers

    Science.gov (United States)

    Pappu, Rohit V.; Nussinov, Ruth

    2009-03-01

    In appropriate physiological milieux proteins spontaneously fold into their functional three-dimensional structures. The amino acid sequences of functional proteins contain all the information necessary to specify the folds. This remarkable observation has spawned research aimed at answering two major questions. (1) Of all the conceivable structures that a protein can adopt, why is the ensemble of native-like structures the most favorable? (2) What are the paths by which proteins manage to robustly and reproducibly fold into their native structures? Anfinsen's thermodynamic hypothesis has guided the pursuit of answers to the first question whereas Levinthal's paradox has influenced the development of models for protein folding dynamics. Decades of work have led to significant advances in the folding problem. Mean-field models have been developed to capture our current, coarse grain understanding of the driving forces for protein folding. These models are being used to predict three-dimensional protein structures from sequence and stability profiles as a function of thermodynamic and chemical perturbations. Impressive strides have also been made in the field of protein design, also known as the inverse folding problem, thereby testing our understanding of the determinants of the fold specificities of different sequences. Early work on protein folding pathways focused on the specific sequence of events that could lead to a simplification of the search process. However, unifying principles proved to be elusive. Proteins that show reversible two-state folding-unfolding transitions turned out to be a gift of natural selection. Focusing on these simple systems helped researchers to uncover general principles regarding the origins of cooperativity in protein folding thermodynamics and kinetics. On the theoretical front, concepts borrowed from polymer physics and the physics of spin glasses led to the development of a framework based on energy landscape theories. These

  16. Image Analysis for Nail-fold Capillaroscopy

    OpenAIRE

    Vucic, Vladimir

    2015-01-01

    Detection of diseases in an early stage is very important since it can make the treatment of patients easier, safer and more ecient. For the detection of rheumatic diseases, and even prediction of tendencies towards such diseases, capillaroscopy is becoming an increasingly recognized method. Nail-fold capillaroscopy is a non-invasive imaging technique that is used for analysis of microcirculation abnormalities that may lead todisease like systematic sclerosis, Reynauds phenomenon and others. ...

  17. Coherent topological phenomena in protein folding

    DEFF Research Database (Denmark)

    Bohr, Henrik; Brunak, Søren; Bohr, Jakob

    1997-01-01

    A theory is presented for coherent topological phenomena in protein dynamics with implications for protein folding and stability. We discuss the relationship to the writhing number used in knot diagrams of DNA. The winding state defines a long-range order along the backbone of a protein with long......-range excitations, `wring' modes, that play an important role in protein denaturation and stability. Energy can be pumped into these excitations, either thermally or by an external force....

  18. Log and tree sawing times for hardwood mills

    Science.gov (United States)

    Everette D. Rast

    1974-01-01

    Data on 6,850 logs and 1,181 trees were analyzed to predict sawing times. For both logs and trees, regression equations were derived that express (in minutes) sawing time per log or tree and per Mbf. For trees, merchantable height is expressed in number of logs as well as in feet. One of the major uses for the tables of average sawing times is as a bench mark against...

  19. Empirical relationships between tree fall and landscape-level amounts of logging and fire.

    Science.gov (United States)

    Lindenmayer, David B; Blanchard, Wade; Blair, David; McBurney, Lachlan; Stein, John; Banks, Sam C

    2018-01-01

    Large old trees are critically important keystone structures in forest ecosystems globally. Populations of these trees are also in rapid decline in many forest ecosystems, making it important to quantify the factors that influence their dynamics at different spatial scales. Large old trees often occur in forest landscapes also subject to fire and logging. However, the effects on the risk of collapse of large old trees of the amount of logging and fire in the surrounding landscape are not well understood. Using an 18-year study in the Mountain Ash (Eucalyptus regnans) forests of the Central Highlands of Victoria, we quantify relationships between the probability of collapse of large old hollow-bearing trees at a site and the amount of logging and the amount of fire in the surrounding landscape. We found the probability of collapse increased with an increasing amount of logged forest in the surrounding landscape. It also increased with a greater amount of burned area in the surrounding landscape, particularly for trees in highly advanced stages of decay. The most likely explanation for elevated tree fall with an increasing amount of logged or burned areas in the surrounding landscape is change in wind movement patterns associated with cutblocks or burned areas. Previous studies show that large old hollow-bearing trees are already at high risk of collapse in our study area. New analyses presented here indicate that additional logging operations in the surrounding landscape will further elevate that risk. Current logging prescriptions require the protection of large old hollow-bearing trees on cutblocks. We suggest that efforts to reduce the probability of collapse of large old hollow-bearing trees on unlogged sites will demand careful landscape planning to limit the amount of timber harvesting in the surrounding landscape.

  20. Evolution of a protein folding nucleus.

    Science.gov (United States)

    Xia, Xue; Longo, Liam M; Sutherland, Mason A; Blaber, Michael

    2016-07-01

    The folding nucleus (FN) is a cryptic element within protein primary structure that enables an efficient folding pathway and is the postulated heritable element in the evolution of protein architecture; however, almost nothing is known regarding how the FN structurally changes as complex protein architecture evolves from simpler peptide motifs. We report characterization of the FN of a designed purely symmetric β-trefoil protein by ϕ-value analysis. We compare the structure and folding properties of key foldable intermediates along the evolutionary trajectory of the β-trefoil. The results show structural acquisition of the FN during gene fusion events, incorporating novel turn structure created by gene fusion. Furthermore, the FN is adjusted by circular permutation in response to destabilizing functional mutation. FN plasticity by way of circular permutation is made possible by the intrinsic C3 cyclic symmetry of the β-trefoil architecture, identifying a possible selective advantage that helps explain the prevalence of cyclic structural symmetry in the proteome. © 2015 The Protein Society.

  1. Folding Membrane Proteins by Deep Transfer Learning

    KAUST Repository

    Wang, Sheng

    2017-08-29

    Computational elucidation of membrane protein (MP) structures is challenging partially due to lack of sufficient solved structures for homology modeling. Here, we describe a high-throughput deep transfer learning method that first predicts MP contacts by learning from non-MPs and then predicts 3D structure models using the predicted contacts as distance restraints. Tested on 510 non-redundant MPs, our method has contact prediction accuracy at least 0.18 better than existing methods, predicts correct folds for 218 MPs, and generates 3D models with root-mean-square deviation (RMSD) less than 4 and 5 Å for 57 and 108 MPs, respectively. A rigorous blind test in the continuous automated model evaluation project shows that our method predicted high-resolution 3D models for two recent test MPs of 210 residues with RMSD ∼2 Å. We estimated that our method could predict correct folds for 1,345–1,871 reviewed human multi-pass MPs including a few hundred new folds, which shall facilitate the discovery of drugs targeting at MPs.

  2. Protein Folding: Search for Basic Physical Models

    Directory of Open Access Journals (Sweden)

    Ivan Y. Torshin

    2003-01-01

    Full Text Available How a unique three-dimensional structure is rapidly formed from the linear sequence of a polypeptide is one of the important questions in contemporary science. Apart from biological context of in vivo protein folding (which has been studied only for a few proteins, the roles of the fundamental physical forces in the in vitro folding remain largely unstudied. Despite a degree of success in using descriptions based on statistical and/or thermodynamic approaches, few of the current models explicitly include more basic physical forces (such as electrostatics and Van Der Waals forces. Moreover, the present-day models rarely take into account that the protein folding is, essentially, a rapid process that produces a highly specific architecture. This review considers several physical models that may provide more direct links between sequence and tertiary structure in terms of the physical forces. In particular, elaboration of such simple models is likely to produce extremely effective computational techniques with value for modern genomics.

  3. Hierarchical Diagnosis of Vocal Fold Disorders

    Science.gov (United States)

    Nikkhah-Bahrami, Mansour; Ahmadi-Noubari, Hossein; Seyed Aghazadeh, Babak; Khadivi Heris, Hossein

    This paper explores the use of hierarchical structure for diagnosis of vocal fold disorders. The hierarchical structure is initially used to train different second-level classifiers. At the first level normal and pathological signals have been distinguished. Next, pathological signals have been classified into neurogenic and organic vocal fold disorders. At the final level, vocal fold nodules have been distinguished from polyps in organic disorders category. For feature selection at each level of hierarchy, the reconstructed signal at each wavelet packet decomposition sub-band in 5 levels of decomposition with mother wavelet of (db10) is used to extract the nonlinear features of self-similarity and approximate entropy. Also, wavelet packet coefficients are used to measure energy and Shannon entropy features at different spectral sub-bands. Davies-Bouldin criterion has been employed to find the most discriminant features. Finally, support vector machines have been adopted as classifiers at each level of hierarchy resulting in the diagnosis accuracy of 92%.

  4. Thermostability in endoglucanases is fold-specific

    Science.gov (United States)

    2011-01-01

    Background Endoglucanases are usually considered to be synergistically involved in the initial stages of cellulose breakdown-an essential step in the bioprocessing of lignocellulosic plant materials into bioethanol. Despite their economic importance, we currently lack a basic understanding of how some endoglucanases can sustain their ability to function at elevated temperatures required for bioprocessing, while others cannot. In this study, we present a detailed comparative analysis of both thermophilic and mesophilic endoglucanases in order to gain insights into origins of thermostability. We analyzed the sequences and structures for sets of endoglucanase proteins drawn from the Carbohydrate-Active enZymes (CAZy) database. Results Our results demonstrate that thermophilic endoglucanases and their mesophilic counterparts differ significantly in their amino acid compositions. Strikingly, these compositional differences are specific to protein folds and enzyme families, and lead to differences in intramolecular interactions in a fold-dependent fashion. Conclusions Here, we provide fold-specific guidelines to control thermostability in endoglucanases that will aid in making production of biofuels from plant biomass more efficient. PMID:21291533

  5. Thermostability in endoglucanases is fold-specific

    Directory of Open Access Journals (Sweden)

    Wolt Jeffrey D

    2011-02-01

    Full Text Available Abstract Background Endoglucanases are usually considered to be synergistically involved in the initial stages of cellulose breakdown-an essential step in the bioprocessing of lignocellulosic plant materials into bioethanol. Despite their economic importance, we currently lack a basic understanding of how some endoglucanases can sustain their ability to function at elevated temperatures required for bioprocessing, while others cannot. In this study, we present a detailed comparative analysis of both thermophilic and mesophilic endoglucanases in order to gain insights into origins of thermostability. We analyzed the sequences and structures for sets of endoglucanase proteins drawn from the Carbohydrate-Active enZymes (CAZy database. Results Our results demonstrate that thermophilic endoglucanases and their mesophilic counterparts differ significantly in their amino acid compositions. Strikingly, these compositional differences are specific to protein folds and enzyme families, and lead to differences in intramolecular interactions in a fold-dependent fashion. Conclusions Here, we provide fold-specific guidelines to control thermostability in endoglucanases that will aid in making production of biofuels from plant biomass more efficient.

  6. Wrinkles, folds, and plasticity in granular rafts

    Science.gov (United States)

    Jambon-Puillet, Etienne; Josserand, Christophe; Protière, Suzie

    2017-09-01

    We investigate the mechanical response of a compressed monolayer of large and dense particles at a liquid-fluid interface: a granular raft. Upon compression, rafts first wrinkle; then, as the confinement increases, the deformation localizes in a unique fold. This characteristic buckling pattern is usually associated with floating elastic sheets, and as a result, particle laden interfaces are often modeled as such. Here, we push this analogy to its limits by comparing quantitative measurements of the raft morphology to a theoretical continuous elastic model of the interface. We show that, although powerful to describe the wrinkle wavelength, the wrinkle-to-fold transition, and the fold shape, this elastic description does not capture the finer details of the experiment. We describe an unpredicted secondary wavelength, a compression discrepancy with the model, and a hysteretic behavior during compression cycles, all of which are a signature of the intrinsic discrete and frictional nature of granular rafts. It suggests also that these composite materials exhibit both plastic transition and jamming dynamics.

  7. Araguaia fold belt, new geochronological data

    International Nuclear Information System (INIS)

    Lafon, J.M.; Macambira, J.B.; Macambira, M.J.B.; Moura, C.A.V.; Souza, A.C.C.

    1990-01-01

    The northern part of the Araguaia Fold Belt (AFB) outcrops in a N-S direction for about 400 km in the state of Tocantins. Dome-like structures occur in this fold belt also in a N-S direction. Both deformation and metamorphism increase from the West to the East. The basement of the AFB consist of Colmeia complex and Cantao gneiss, which crop out mainly in the core of the dome-like structures. The supracrustals rocks of the fold belt belongs to the Baixo Araguaia supergroup which is divided into the lower Estrondo group and the upper Tocantins group. Preliminary Sm-Nd data from the Colmeia complex (Grota Rica dome) gave Archean model ages of 2.8 Ga (TNd sub(DM)) while Rb-Sr data in the same rocks give an age of 2530 ± 200 Ma. In the others dome-like structures, the Rb-Sr systematics gave ages for the Colmeia a complex of 2239 ± 47 Ma (Colmeia structure) and 1972 ± 46 Ma (Lontra structure). These younger ages are believed to represent partial to total isotopic resetting of the Rb-Sr system during the Transamazonian Event. The Rb-Sr studies of the Cantao gneiss gave an age of 1774 ± 31 Ma. (author)

  8. THE INFLUENCE OF FOLD AND FRACTURE DEVELOPMENT ON RESERVOIR BEHAVIOR OF THE LISBURNE GROUP OF NORTHERN ALASKA

    Energy Technology Data Exchange (ETDEWEB)

    Wesley K. Wallace; Catherine L. Hanks; Michael T. Whalen; Jerry Jensen; Paul K. Atkinson; Joseph S. Brinton

    2000-05-01

    -and-thrust belt. The steep forelimbs of angular asymmetrical folds typically have been cut and displaced by thrust faults, resulting in superposition of a fault-bend fold geometry on the truncated folds. Remnant uncut folds within trains of thrust-truncated folds and the predominance of detachment folds to the north suggest that these folds originated as detachment folds. Fold asymmetry and a more uniformly competent Lisburne Limestone may have favored accommodation of a significant proportion of shortening by thrust faulting, in contrast with the dominance of fold shortening to the north. Two dominant sets of fractures are present in the least deformed Lisburne Limestone: Early extension fractures normal to the regional fold trend and late extension and shear fractures parallel to the regional fold trend. These two major fracture sets remain as deformation increases, but they are more variable in orientation, character, and relative age. Compared to fold limbs, the fold hinges display greater density and extent of fractures, more conjugate and shear fractures, and more evidence of penetrative strain. This suggests that hinges remained fixed during fold growth. Late extension fractures normal to the fold axis are common even where penetrative strain is greatest. Fracture density is greater in fine-grained carbonates than in coarse-grained carbonates over the entire spectrum of deformation.

  9. Education research: case logs in the assessment of medical students in the neurology outpatient clinic.

    Science.gov (United States)

    Albert, Dara V; Brorson, James R; Amidei, Christina; Lukas, Rimas V

    2014-04-22

    Using outpatient neurology clinic case logs completed by medical students on neurology clerkships, we examined the impact of outpatient clinical encounter volume per student on outcomes of knowledge assessed by the National Board of Medical Examiners (NBME) Clinical Neurology Subject Examination and clinical skills assessed by the Objective Structured Clinical Examination (OSCE). Data from 394 medical students from July 2008 to June 2012, representing 9,791 patient encounters, were analyzed retrospectively. Pearson correlations were calculated examining the relationship between numbers of cases logged per student and performance on the NBME examination. Similarly, correlations between cases logged and performance on the OSCE, as well as on components of the OSCE (history, physical examination, clinical formulation), were evaluated. There was a correlation between the total number of cases logged per student and NBME examination scores (r = 0.142; p = 0.005) and OSCE scores (r = 0.136; p = 0.007). Total number of cases correlated with the clinical formulation component of the OSCE (r = 0.172; p = 0.001) but not the performance on history or physical examination components. The volume of cases logged by individual students in the outpatient clinic correlates with performance on measures of knowledge and clinical skill. In measurement of clinical skill, seeing a greater volume of patients in the outpatient clinic is related to improved clinical formulation on the OSCE. These findings may affect methods employed in assessment of medical students, residents, and fellows.

  10. Features of the electric discharge logging system; Hoden hoshiki jiban tansa system no tokucho

    Energy Technology Data Exchange (ETDEWEB)

    Kudo, K; Yasuda, N [Tokyo Electric Power Co. Inc., Tokyo (Japan); Kuniyasu, T; Kanda, K; Tanaka, T

    1997-10-22

    Logging system has been developed, which performs discharge in the water in a bore hole relatively small in diameter. The part of this system to operate in the hole consists of an oscillator that triggers off discharge in the water and an oscillation receiving set that utilizes electrostriction proper to ceramics. The groundborne part of the system is comprised of a probe lift control and logging control. The logging process is carried out by causing discharge in the water in a bore hole filled with water. The energy generated by the oscillator is far greater than that produced in the sonic logging or suspension type logging method, and the wave generated and propagated in the hole is received by the receiving set in the same hole. The result indicates that the P-wave velocity in a hard rockbed is rather high and that values obtained on the spot by this system is quite similar to those obtained from the core sample from the hole. In the case of a rock bed abundant in cracks, thanks to the high S/N ratio such a bed presents and the merits of digital recording, investigations can be minutely conducted. The merit of this system is found in that it can damp the amplitude in dealing with the data collected on the spot. 3 refs., 7 figs.

  11. Regeneration of five commercially-valuable tree species after experimental logging in an Amazonian forest

    Directory of Open Access Journals (Sweden)

    Lima Albertina Pimentel

    2002-01-01

    Full Text Available This study investigated the regeneration variation of five commercially valuable tree species in relation to different intensities of felling in fourteen 4-ha plots in an area under experimental forest management. This experiment was carried out in a typical Amazonian tropical forest sample on "terra-firme," in Manaus (AM. Plots were logged 7 and 8 years (1987 and 1988, or 3 years (1993 before the study. All trees with height greater than 2 m, and diameter at breast height (DBH smaller than 10 cm were measured. Only Aniba hostmanniana, Ocotea aciphylla, Licaria pachycarpa, Eschweilera coriacea and Goupia glabra were sufficiently common for individual analyses. These species have high timber values in the local market. Eight years after logging, the species responded differently to logging intensities. The numbers of individuals of Goupia glabra and Aniba hostmanniana were positively related to the intensity of logging, while Ocotea aciphylla, Licaria pachycarpa, and Eschweilera coriacea showed no statistically significant response. In the most recently (1993 logged areas, Goupia glabra and Aniba hostmanniana had higher numbers of individuals than the control plots.

  12. Log-Log Convexity of Type-Token Growth in Zipf's Systems

    Science.gov (United States)

    Font-Clos, Francesc; Corral, Álvaro

    2015-06-01

    It is traditionally assumed that Zipf's law implies the power-law growth of the number of different elements with the total number of elements in a system—the so-called Heaps' law. We show that a careful definition of Zipf's law leads to the violation of Heaps' law in random systems, with growth curves that have a convex shape in log-log scale. These curves fulfill universal data collapse that only depends on the value of Zipf's exponent. We observe that real books behave very much in the same way as random systems, despite the presence of burstiness in word occurrence. We advance an explanation for this unexpected correspondence.

  13. Data Cleaning Methods for Client and Proxy Logs

    NARCIS (Netherlands)

    Weinreich, H.; Obendorf, H.; Herder, E.; Edmonds, A.; Hawkey, K.; Kellar, M.; Turnbull, D.

    2006-01-01

    In this paper we present our experiences with the cleaning of Web client and proxy usage logs, based on a long-term browsing study with 25 participants. A detailed clickstream log, recorded using a Web intermediary, was combined with a second log of user interface actions, which was captured by a

  14. Sediment transport and soil disturbance after postfire logging.

    Science.gov (United States)

    James D. McIver

    2003-01-01

    Recently there has been considerable debate on the practice of postfire logging, in which burned forests are entered soon after fire to recover commercially valuable trees. Proponents of the practice argue that postfire logging is part of a 'restoration package' that can be used to control erosion (e.g., contour logging) and can help to mitigate costs of...

  15. Why, What, and How to Log? Lessons from LISTEN

    Science.gov (United States)

    Mostow, Jack; Beck, Joseph E.

    2009-01-01

    The ability to log tutorial interactions in comprehensive, longitudinal, fine-grained detail offers great potential for educational data mining--but what data is logged, and how, can facilitate or impede the realization of that potential. We propose guidelines gleaned over 15 years of logging, exploring, and analyzing millions of events from…

  16. Economic incentives exist to support measures to reduce illegal logging

    Science.gov (United States)

    J.A. Turner; J. Buongiorno; A. Katz; S. Zhu; R. Li

    2008-01-01

    Three studies of the global economic implications of eliminating illegal logging are summarized. Processors of illegally sourced wood would lose from the elimination of illegal logging through high prices for logs and decreased production of wood products. Associated with these changes could be losses in employment and income. Beyond these losses to the processing...

  17. A survey of animal-powered logging in Alabama

    Science.gov (United States)

    Christopher W. Toms; Mark R. Dubois; John C. Bliss; John H. Wilhoit; Robert B. Rummer

    2001-01-01

    In a state with a very large, highly mechanized timber harvesting industry, animal-powered logging still occupies a niche in Alabama as a small-scale harvesting alternative. This article summarizes the results from a study that examined the extent of animal logging in Alabama. We investigated this topic by asking who is logging with animals, where are they working,...

  18. Interactive machine learning for postprocessing CT images of hardwood logs

    Science.gov (United States)

    Erol Sarigul; A. Lynn Abbott; Daniel L. Schmoldt

    2003-01-01

    This paper concerns the nondestructive evaluation of hardwood logs through the analysis of computed tomography (CT) images. Several studies have shown that the commercial value of resulting boards can be increased substantially if log sawing strategies are chosen using prior knowledge of internal log defects. Although CT imaging offers a potential means of obtaining...

  19. Financial and Economic Analysis of Reduced Impact Logging

    Science.gov (United States)

    Tom Holmes

    2016-01-01

    Concern regarding extensive damage to tropical forests resulting from logging increased dramatically after World War II when mechanized logging systems developed in industrialized countries were deployed in the tropics. As a consequence, tropical foresters began developing logging procedures that were more environmentally benign, and by the 1990s, these practices began...

  20. Environmental effects of postfire logging: literature review and annotated bibliography.

    Science.gov (United States)

    James D. McIver; Lynn Starr

    2000-01-01

    The scientific literature on logging after wildfire is reviewed, with a focus on environmental effects of logging and removal of large woody structure. Rehabilitation, the practice of planting or seeding after logging, is not reviewed here. Several publications are cited that can be described as “commentaries,” intended to help frame the public debate. We review 21...

  1. Utilization and cost of log production from animal loging operations

    Science.gov (United States)

    Suraj P. Shrestha; Bobby L. Lanford; Robert B. Rummer; Mark Dubois

    2006-01-01

    Forest harvesting with animals is a labor-intensive operation. It is expensive to use machines on smaller woodlots, which require frequent moves if mechanically logged. So, small logging systems using animals may be more cost effective. In this study, work sampling was used for five animal logging operations in Alabama to measure productive and non-productive time...

  2. Development of regional stump-to-mill logging cost estimators

    Science.gov (United States)

    Chris B. LeDoux; John E. Baumgras

    1989-01-01

    Planning logging operations requires estimating the logging costs for the sale or tract being harvested. Decisions need to be made on equipment selection and its application to terrain. In this paper a methodology is described that has been developed and implemented to solve the problem of accurately estimating logging costs by region. The methodology blends field time...

  3. Ultrafast CT scanning of an oak log for internal defects

    Science.gov (United States)

    Francis G. Wagner; Fred W. Taylor; Douglas S. Ladd; Charles W. McMillin; Fredrick L. Roder

    1989-01-01

    Detecting internal defects in sawlogs and veneer logs with computerized tomographic (CT) scanning is possible, but has been impractical due to the long scanning time required. This research investigated a new scanner able to acquire 34 cross-sectional log scans per second. This scanning rate translates to a linear log feed rate of 85 feet (25.91 m) per minute at one...

  4. Technology development for high temperature logging tools

    Energy Technology Data Exchange (ETDEWEB)

    Veneruso, A.F.; Coquat, J.A.

    1979-01-01

    A set of prototype, high temperature logging tools (temperature, pressure and flow) were tested successfully to temperatures up to 275/sup 0/C in a Union geothermal well during November 1978 as part of the Geothermal Logging Instrumentation Development Program. This program is being conducted by Sandia Laboratories for the Department of Energy's Division of Geothermal Energy. The progress and plans of this industry based program to develop and apply the high temperature instrumentation technology needed to make reliable geothermal borehole measurements are described. Specifically, this program is upgrading existing sondes for improved high temperature performance, as well as applying new materials (elastomers, polymers, metals and ceramics) and developing component technology such as high temperature cables, cableheads and electronics to make borehole measurements such as formation temperature, flow rate, high resolution pressure and fracture mapping. In order to satisfy critical existing needs, the near term goal is for operation up to 275/sup 0/C and 7000 psi by the end of FY80. The long term goal is for operation up to 350/sup 0/C and 20,000 psi by the end of FY84.

  5. Public PCs: Log Out or Lose Out

    CERN Multimedia

    Computer Security Team

    2013-01-01

    Do you regularly use one of the public Windows or Linux terminals in the CERN library or in front of the Users' Office? Or do you often give presentations or run meetings, workshops or conferences? Did you recently attend a training session in the CERN Training Centre? If you answered at least once with “yes”, we have a plea for you: LOG OUT when done in order to protect your data!   You might recall that CERN considers that “Your Privacy is Paramount”. But this does not come for free. In the few past months, we have received several reports from vigilant people who have spotted open user sessions on public PCs at CERN. Those users simply forgot to log out once their work, training or meeting was over. Their session continued without them being present. Worse, with CERN using a central Single Sign-On (SSO) portal, their login credentials would allow a malicious person at CERN to use those credentials to access that user’s mailbox, DFS ...

  6. Dual excitation acoustic paramagnetic logging tool

    Energy Technology Data Exchange (ETDEWEB)

    Vail, III, William B. (Bothell, WA)

    1989-01-01

    New methods and apparatus are disclosed which allow measurement of the presence of oil and water in gelogical formations using a new physical effect called the Acoustic Paramagnetic Logging Effect (APLE). The presence of petroleum in formation causes a slight increase in the earth's magnetic field in the vicinity of the reservoir. This is the phenomena of paramagnetism. Application of an acoustic source to a geological formation at the Larmor frequency of the nucleous present causes the paramagnetism of the formation to disappear. This results in a decrease in the earth's magnetic field in the vicinity of the oil bearing formation. Repetitively frequency sweeping the acoustic source through the Larmor frequency of the nucleons present (approx. 2 kHz) causes an amplitude modulation of the earth's magnetic field which is a consequence of the APLE. The amplitude modulation of the earth's magnetic field is measured with an induction coil gradiometer and provides a direct measure of the amount of oil and water in the excitation zone of the formation. The phase of the signal is used to infer the longitudinal relaxation times of the fluids present, which results in the ability in general to separate oil and water and to measure the viscosity of the oil present. Such measurements may be preformed in open boreholes and in cased well bores. The Dual Excitation Acoustic Paramagnetic Logging Tool employing two acoustic sources is also described.

  7. Radiation incident in oil well logging

    International Nuclear Information System (INIS)

    Lozada, J.A.

    1998-01-01

    On June 4th 1997 equipment failure and violation of approved procedures by a crew of workers initiated a series of events that resulted in the unnecessary exposure to neutron and gamma radiation, from a 666 GBq Am 241 Be source, of forty two workers from a well logging company in Venezuela. Due to the presence of dry mud or drilling fluids inside the logging tool, the nosepiece was screwed off the rest of the source holder; this piece was mistaken for the entire source holder thus leaving the source inside the tool. The tool was labelled for maintenance and electronic laboratory personal worked near the source for seven hours before they identify its presence. As soon as the incident was detected a contingency plan was implemented and the source could be retrieved from the tool and placed in its shipping container. The TLD badges indicate doses well below the annual limit of 20 mSv, and none of the workers involved in the incident seem to show serious health consequences from it. After the incident, in order to avoid the occurrence of similar situations, a better source and tool maintenance program was implemented, all the workers were re-trained, and area monitors were installed in all operations bases. (author)

  8. Effects of logging on macroinvertebrates in streams with and without buffer strips

    Energy Technology Data Exchange (ETDEWEB)

    Newbold, J D; Erman, D C; Roby, K B

    1980-01-01

    The impact of logging with and without buffer strip protection on stream macroinvertebrates was examined through comparisons of community structure in commercially logged and control watersheds throughout northern California. A nonparametric test of community dissimilarities within matched blocks of two control and one or two treated stations showed significant (P < 0.05) logging effects on unprotected streams when Euclidean distance and mutual information were used as dissimilarity indices, but not when chord distance was used. Shannon diversity in unprotected streams was lower (P < 0.01) than in control (unlogged) streams; densities of total macroinvertebrate fauna and of Chironomidae, Baetis, and Nemoura were higher in unprotected streams than in controls (P <0.05). Streams with narrow buffer strips (<30 m) showed significant effects by the Euclidean distance test, but diversity varied widely and was not significantly different from that in either unprotected or control streams than in controls (P < 0.05). Macroinvertebrate communities in streams with wide buffers (greater than or equal to 30m) could not be distinguished from those of controls by either Euclidean distance or diversity; however, diversity in wide-buffered streams was significantly greater than in streams without buffer strips, indicating effective protection from logging effects.

  9. Functional results after external vocal fold medialization thyroplasty with the titanium vocal fold medialization implant.

    Science.gov (United States)

    Schneider, Berit; Denk, Doris-Maria; Bigenzahn, Wolfgang

    2003-04-01

    A persistent insufficiency of glottal closure is mostly a consequence of a unilateral vocal fold movement impairment. It can also be caused by vocal fold atrophy or scarring processes with regular bilateral respiratory vocal fold function. Because of consequential voice, breathing, and swallowing impairments, a functional surgical treatment is required. The goal of the study was to outline the functional results after medialization thyroplasty with the titanium vocal fold medialization implant according to Friedrich. In the period of 1999 to 2001, an external vocal fold medialization using the titanium implant was performed on 28 patients (12 women and 16 men). The patients were in the age range of 19 to 84 years. Twenty-two patients had a paralysis of the left-side vocal fold, and six patients, of the right-side vocal fold. Detailed functional examinations were executed on all patients before and after the surgery: perceptive voice sound analysis according to the "roughness, breathiness, and hoarseness" method, judgment of the s/z ratio and voice dysfunction index, voice range profile measurements, videostroboscopy, and pulmonary function tests. In case of dysphagia/aspiration, videofluoroscopy of swallowing was also performed. The respective data were statistically analyzed (paired t test, Wilcoxon-test). All patients reported on improvement of voice, swallowing, and breathing functions postoperatively. Videostroboscopy revealed an almost complete glottal closure after surgery in all of the patients. All voice-related parameters showed a significant improvement. An increase of the laryngeal resistance by the medialization procedure could be excluded by analysis of the pulmonary function test. The results confirm the external medialization of the vocal folds as an adequate method in the therapy of voice, swallowing, and breathing impairment attributable to an insufficient glottal closure. The titanium implant offers, apart from good tissue tolerability, the

  10. Glass ionomer application for vocal fold augmentation: Histopathological analysis on rabbit vocal fold.

    Science.gov (United States)

    Demirci, Sule; Tuzuner, Arzu; Callıoglu, Elif Ersoy; Yumusak, Nihat; Arslan, Necmi; Baltacı, Bülent

    2016-04-01

    The aim of this study was to investigate the use of glass ionomer cement (GIC) as an injection material for vocal fold augmentation and to evaluate the biocompatibility of the material. Ten adult New Zealand rabbits were used. Under general anesthesia, 0.1-cc GIC was injected to one vocal fold and the augmentation of vocal fold was observed. No injection was applied to the opposite side, which was accepted as the control group. The animals were sacrificed after 3 months and the laryngeal specimens were histopathologically evaluated. The injected and the noninjected control vocal folds were analyzed. The GIC particles were observed in histological sections on the injected side, and no foreign body giant cells, granulomatous inflammation, necrosis, or marked chronic inflammation were detected around the glass ionomer particles. Mild inflammatory reactions were noticed in only two specimens. The noninjected sides of vocal folds were completely normal. The findings of this study suggest that GIC is biocompatible and may be further investigated as an alternative injection material for augmentation of the vocal fold. Further studies are required to examine the viscoelastic properties of GIC and the long-term effects in experimental studies. NA. © 2015 The American Laryngological, Rhinological and Otological Society, Inc.

  11. A Rat Excised Larynx Model of Vocal Fold Scar

    Science.gov (United States)

    Welham, Nathan V.; Montequin, Douglas W.; Tateya, Ichiro; Tateya, Tomoko; Choi, Seong Hee; Bless, Diane M.

    2009-01-01

    Purpose: To develop and evaluate a rat excised larynx model for the measurement of acoustic, aerodynamic, and vocal fold vibratory changes resulting from vocal fold scar. Method: Twenty-four 4-month-old male Sprague-Dawley rats were assigned to 1 of 4 experimental groups: chronic vocal fold scar, chronic vocal fold scar treated with 100-ng basic…

  12. Rill erosion in burned and salvage logged western montane forests: Effects of logging equipment type, traffic level, and slash treatment

    Science.gov (United States)

    J. W. Wagenbrenner; P. R. Robichaud; R. E. Brown

    2016-01-01

    Following wildfires, forest managers often consider salvage logging burned trees to recover monetary value of timber, reduce fuel loads, or to meet other objectives. Relatively little is known about the cumulative hydrologic effects of wildfire and subsequent timber harvest using logging equipment. We used controlled rill experiments in logged and unlogged (control)...

  13. AFSC/FMA/Vessel Assessment Logging

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Vessels fishing trawl gear, vessels fishing hook-and-line and pot gear that are also greater than 57.5 feet overall, and shoreside and floating processing facilities...

  14. Use of pulsed neutron logging to evaluate perforation washing

    International Nuclear Information System (INIS)

    Dimon, C.A.

    1986-01-01

    This invention relates to the use of pulsed neutron logging techniques before and after perforation washing operations are performed to evaluate the degree of success of the perforation washing operations. Well logging operations of a type designed to respond to the difference between a formation immediately behind the well sheath and voids in the formation are performed both before and after the perforation washing operation. differences between the two resulting logs are then indicative of voids created by perforation washing. In a preferred embodiment, pulsed neutron logging is used as the logging technique, while a weighted brine having a high absorption cross section to pulsed neutrons is used as the perforation washing fluid

  15. Study of the reservoirs of Jurassic and Cretaceous periods in the south-cast slope of Central Kara-Kum vault using combination of acoustic logging, neutron-gamma logging, gamma logging, and electrical logging

    International Nuclear Information System (INIS)

    Meredov, T.M.; Baranov, M.I.

    1978-01-01

    Considered is the possibility of application of the combination of neutron-gamma logging, gamma logging al partitioncoustic logging and electrical logging to lithologica of sections, discovery reservoir layers in carbonate and terrigeneous sections as well as quantitative estimation of the porosity coefficients values at prospecting areas in the south-east slope of Central Kara-Kum vault. Neutron-gamma logging mostly makes it possible to partition carbonate rocks into limestones, dolomites and their interstitial variaties and to indicate sand stone layers with different degree of carbonate content

  16. KFM 01A. Q-logging

    International Nuclear Information System (INIS)

    Barton, Nick

    2003-03-01

    The first Forsmark potential repository site borehole KFM 01A provided core from 101.8 to 1000.7 m depth. This was independently Q-logged during a two-day period (19th-20th February, 2003), without access to BORMAP results or regional jointing frequencies or orientations. The Q-logging was intended to be an independent check for subsequent BORMAP-derived Q-parameter estimation. The Q-logging was accomplished using the manually-recorded 'histogram method' which allows the logger to enter Q-parameter ranges and depths directly into the appropriate histograms, which facilitates subsequent data processing using Excel spreadsheets. Successive pairs of core boxes, which contain an average of 11 meters of core in ten rows, were the source of ten opinions of each of the six Q-parameters, giving a total of 4920 recordings of Q-parameter values for the 164 core boxes. Data processing was divided into several parts, with successively increasing detail. The report therefore contains Q-histograms for the whole core, for four identified fracture(d) zones combined as if one unit, and then for the whole core minus these fracture(d) zones. This background rock mass quality is subsequently divided into nine depth zones or slices, and trends of variation with depth are tabulated. The four identified fracture(d) zones, which are actually of reasonable quality, are also analysed separately, and similarities and subtle differences are discerned between them. The overall quality of this first core is very good to excellent, with Q(mean) of 48.4, and a most frequent Q-value of 100. The range of quality is from 2.1 to 2130, which is the complete upper half of the six order of magnitude Q scale. Even the relatively fracture(d) zones, representing some 13% of the 900 m cored, have a combined Q(mean) of 13.9 and a range of quality of 2.1 to 150

  17. Combinatorial pattern discovery approach for the folding trajectory analysis of a beta-hairpin.

    Directory of Open Access Journals (Sweden)

    Laxmi Parida

    2005-06-01

    Full Text Available The study of protein folding mechanisms continues to be one of the most challenging problems in computational biology. Currently, the protein folding mechanism is often characterized by calculating the free energy landscape versus various reaction coordinates, such as the fraction of native contacts, the radius of gyration, RMSD from the native structure, and so on. In this paper, we present a combinatorial pattern discovery approach toward understanding the global state changes during the folding process. This is a first step toward an unsupervised (and perhaps eventually automated approach toward identification of global states. The approach is based on computing biclusters (or patterned clusters-each cluster is a combination of various reaction coordinates, and its signature pattern facilitates the computation of the Z-score for the cluster. For this discovery process, we present an algorithm of time complexity c in RO((N + nm log n, where N is the size of the output patterns and (n x m is the size of the input with n time frames and m reaction coordinates. To date, this is the best time complexity for this problem. We next apply this to a beta-hairpin folding trajectory and demonstrate that this approach extracts crucial information about protein folding intermediate states and mechanism. We make three observations about the approach: (1 The method recovers states previously obtained by visually analyzing free energy surfaces. (2 It also succeeds in extracting meaningful patterns and structures that had been overlooked in previous works, which provides a better understanding of the folding mechanism of the beta-hairpin. These new patterns also interconnect various states in existing free energy surfaces versus different reaction coordinates. (3 The approach does not require calculating the free energy values, yet it offers an analysis comparable to, and sometimes better than, the methods that use free energy landscapes, thus validating the

  18. Combinatorial Pattern Discovery Approach for the Folding Trajectory Analysis of a beta-Hairpin.

    Directory of Open Access Journals (Sweden)

    2005-06-01

    Full Text Available The study of protein folding mechanisms continues to be one of the most challenging problems in computational biology. Currently, the protein folding mechanism is often characterized by calculating the free energy landscape versus various reaction coordinates, such as the fraction of native contacts, the radius of gyration, RMSD from the native structure, and so on. In this paper, we present a combinatorial pattern discovery approach toward understanding the global state changes during the folding process. This is a first step toward an unsupervised (and perhaps eventually automated approach toward identification of global states. The approach is based on computing biclusters (or patterned clusters-each cluster is a combination of various reaction coordinates, and its signature pattern facilitates the computation of the Z-score for the cluster. For this discovery process, we present an algorithm of time complexity cinRO((N + nm log n, where N is the size of the output patterns and (n x m is the size of the input with n time frames and m reaction coordinates. To date, this is the best time complexity for this problem. We next apply this to a beta-hairpin folding trajectory and demonstrate that this approach extracts crucial information about protein folding intermediate states and mechanism. We make three observations about the approach: (1 The method recovers states previously obtained by visually analyzing free energy surfaces. (2 It also succeeds in extracting meaningful patterns and structures that had been overlooked in previous works, which provides a better understanding of the folding mechanism of the beta-hairpin. These new patterns also interconnect various states in existing free energy surfaces versus different reaction coordinates. (3 The approach does not require calculating the free energy values, yet it offers an analysis comparable to, and sometimes better than, the methods that use free energy landscapes, thus validating the

  19. FPGA based computation of average neutron flux and e-folding period for start-up range of reactors

    International Nuclear Information System (INIS)

    Ram, Rajit; Borkar, S.P.; Dixit, M.Y.; Das, Debashis

    2013-01-01

    Pulse processing instrumentation channels used for reactor applications, play a vital role to ensure nuclear safety in startup range of reactor operation and also during fuel loading and first approach to criticality. These channels are intended for continuous run time computation of equivalent reactor core neutron flux and e-folding period. This paper focuses only the computational part of these instrumentation channels which is implemented in single FPGA using 32-bit floating point arithmetic engine. The computations of average count rate, log of average count rate, log rate and reactor period are done in VHDL using digital circuit realization approach. The computation of average count rate is done using fully adaptive window size moving average method, while Taylor series expansion for logarithms is implemented in FPGA to compute log of count rate, log rate and reactor e-folding period. This paper describes the block diagrams of digital logic realization in FPGA and advantage of fully adaptive window size moving average technique over conventional fixed size moving average technique for pulse processing of reactor instrumentations. (author)

  20. Method and apparatus for logging inclined earth boreholes

    International Nuclear Information System (INIS)

    Youmans, A.H.

    1981-01-01

    An improved technique is provided for comparing the velocity of an elongated well logging instrument traversing an inclined earth borehole with the playout velocity of the well logging cable at the earth's surface to control both the cable hoist drum rotation and the rate of movement of the subsurface instrument and thus insure cable playout is in equilibrium with the logging instrument movement. Method and apparatus are described for detecting any reduction in movement of the logging instrument through the borehole and for reducing the velocity of the logging cable playout in response thereto by reducing drum rotation. Further, when the velocity of cable playout slows to a preselected value, a monitoring circuit generates control signals which actuate a means of power attached to or integral with the logging instrument which, upon initiation, apply a force to move the logging instrument upward or downward within the borehole

  1. DOE-Grand Junction logging model data synopsis

    International Nuclear Information System (INIS)

    Mathews, M.A.; Koizumi, C.J.; Evans, H.B.

    1978-05-01

    This synopsis provides the available data concerning the logging models at the DoE-Grand Junction facility, to date (1976). Because gamma-ray logs are used in uranium exploration to estimate the grade (percent U 3 O 8 ) and the thickness of uranium ore zones in exploration drill holes, logging models are required to calibrate the gamma-ray logging equipment in order to obtain accuracy, uniformity, standardization, and repeatability during logging. This quality control is essential for accurate ore reserve calculations and for estimates of ore potential. The logging models at the DoE-Grand Junction facility are available for use by private industry in calibrating their gamma-ray logging equipment. 21 figures, 26 tables

  2. Applicability estimation of flowmeter logging for detecting hydraulic pass

    International Nuclear Information System (INIS)

    Miyakawa, Kimio; Tanaka, Yasuji; Tanaka, Kazuhiro

    1997-01-01

    Estimation of the hydraulic pass governing hydrogeological structure contributes significantly to the siting HLW repository. Flowmeter logging can detect hydraulic passes by measuring vertical flow velocity of groundwater in the borehole. We reviewed application of this logging in situ. The hydraulic pass was detected with combination of ambient flow logging, with pumping and/or injecting induced flow logging. This application showed that the flowmeter logging detected hydraulic passes conveniently and accurately compared with other hydraulic tests. Hydraulic conductivity by using flowmeter logging was assessed above 10 -6 m/sec and within one order from comparison with injection packer tests. We suggest that appropriate application of the flowmeter logging for the siting is conducted before hydraulic tests because test sections and monitoring sections are decided rationally for procurement of quantitative hydraulic data. (author)

  3. Nanoscale Dewetting Transition in Protein Complex Folding

    Science.gov (United States)

    Hua, Lan; Huang, Xuhui; Liu, Pu; Zhou, Ruhong; Berne, Bruce J.

    2011-01-01

    In a previous study, a surprising drying transition was observed to take place inside the nanoscale hydrophobic channel in the tetramer of the protein melittin. The goal of this paper is to determine if there are other protein complexes capable of displaying a dewetting transition during their final stage of folding. We searched the entire protein data bank (PDB) for all possible candidates, including protein tetramers, dimers, and two-domain proteins, and then performed the molecular dynamics (MD) simulations on the top candidates identified by a simple hydrophobic scoring function based on aligned hydrophobic surface areas. Our large scale MD simulations found several more proteins, including three tetramers, six dimers, and two two-domain proteins, which display a nanoscale dewetting transition in their final stage of folding. Even though the scoring function alone is not sufficient (i.e., a high score is necessary but not sufficient) in identifying the dewetting candidates, it does provide useful insights into the features of complex interfaces needed for dewetting. All top candidates have two features in common: (1) large aligned (matched) hydrophobic areas between two corresponding surfaces, and (2) large connected hydrophobic areas on the same surface. We have also studied the effect on dewetting of different water models and different treatments of the long-range electrostatic interactions (cutoff vs PME), and found the dewetting phenomena is fairly robust. This work presents a few proteins other than melittin tetramer for further experimental studies of the role of dewetting in the end stages of protein folding. PMID:17608515

  4. Acoustic--nuclear permeability logging system

    International Nuclear Information System (INIS)

    Dowling, D.J.; Arnold, D.M.

    1978-01-01

    A down hole logging tool featuring a neutron generator, an acoustic disturbance generator, and a radiation detection system is described. An array of acoustic magnetostriction transducers is arranged about the target of a neutron accelerator. Two gamma ray sensors are separated from the accelerator target by shielding. According to the method of the invention, the underground fluid at the level of a formation is bombarded by neutrons which react with oxygen in the fluid to produce unstable nitrogen 16 particles according to the reaction 16 O(n,p) 16 N. Acoustic pulses are communicated to the fluid, and are incident on the boundary of the borehole at the formation. The resulting net flow of fluid across the boundary is determined from radiation detection measurements of the decaying 16 N particles in the fluid. A measure of the permeability of the formation is obtained from the determination of net fluid flow across the boundary

  5. Logging-while-drilling (LWD) pressure test

    Energy Technology Data Exchange (ETDEWEB)

    Thirud, Aase P.

    2003-07-01

    Statoil and Halliburton have completed a successful test of a new ground-breaking formation evaluation technology on the Norwegian shelf. An LWD formation tester, the GeoTapTM sensor, was used to quantify formation pressure during drilling operations. The inaugural job was completed by Halliburton's Sperry-Sun product service line onboard the Bideford Dolphin at the Borg Field while drilling a horizontal production well in the Vigdis Extension development. The GeoTap tool, part of Sperry-Sun's StellarTM MWD/LWT suite, was run in combination with a complete logging-while-drilling sensor package and the Geo-Pilot rotary steerable drilling system. Repeat formation pressures were taken and successfully transmitted to surface. This is the first time this type of technology has been successfully applied on the Norwegian shelf.

  6. Water injection profiling by nuclear logging

    International Nuclear Information System (INIS)

    Arnold, D.M.

    1980-01-01

    This invention relates to nuclear logging techniques for determining the volume flow rates and flow directions of injected water moving behind a wellbore casing. The apparatus includes a sonde equipped with a neutron source and dual radiation detectors. Oxygen in the neutron irradiated water is transmitted to 16 N and the resultant primary and Compton scattered gamma rays are detected in two energy windows by both detectors. Count rate data is analysed in terms of the windows to obtain linear flow velocities for water flow within and behind the casing. Volume flow rates are determined for upward and downward flow, and horizontal volume flow into the surrounding formation is calculated. A complete injection profile may thus be obtained. (U.K.)

  7. Simulation Control Graphical User Interface Logging Report

    Science.gov (United States)

    Hewling, Karl B., Jr.

    2012-01-01

    One of the many tasks of my project was to revise the code of the Simulation Control Graphical User Interface (SIM GUI) to enable logging functionality to a file. I was also tasked with developing a script that directed the startup and initialization flow of the various LCS software components. This makes sure that a software component will not spin up until all the appropriate dependencies have been configured properly. Also I was able to assist hardware modelers in verifying the configuration of models after they have been upgraded to a new software version. I developed some code that analyzes the MDL files to determine if any error were generated due to the upgrade process. Another one of the projects assigned to me was supporting the End-to-End Hardware/Software Daily Tag-up meeting.

  8. Incremental fold tests of remagnetized carbonate rocks

    Science.gov (United States)

    Van Der Voo, R.; van der Pluijm, B.

    2017-12-01

    Many unmetamorphosed carbonates all over the world are demonstrably remagnetized, with the age of the secondary magnetizations typically close to that of the nearest orogeny in space and time. This observation did not become compelling until the mid-1980's, when the incremental fold test revealed the Appalachian carbonates to carry a syn-deformational remanence of likely Permian age (Scotese et al., 1982, Phys. Earth Planet. Int., v. 30, p. 385-395; Cederquist et al., 2006, Tectonophysics v. 422, p. 41-54). Since that time scores of Appalachian and Rocky Mountain carbonate rocks have added results to the growing database of paleopoles representing remagnetizations. Late Paleozoic remagnetizations form a cloud of results surrounding the reference poles of the Laurentian APWP. Remagnetizations in other locales and with inferred ages coeval with regional orogenies (e.g., Taconic, Sevier/Laramide, Variscan, Indosinian) are also ubiquitous. To be able to transform this cornucopia into valuable anchor-points on the APWP would be highly desirable. This may indeed become feasible, as will be explained next. Recent studies of faulted and folded carbonate-shale sequences have shown that this deformation enhances the illitization of smectite (Haines & van der Pluijm, 2008, Jour. Struct. Geol., v. 30, p. 525-538; Fitz-Diaz et al., 2014, International Geol. Review, v. 56, p. 734-755). 39Ar-40Ar dating of the authigenic illite (neutralizing any detrital illite contribution by taking the intercept of a mixing line) yields, therefore, the age of the deformation. We know that this date is also the age of the syndeformational remanence; thus we have the age of the corresponding paleopole. Results so far are obtained for the Canadian and U.S. Rocky Mountains and for the Spanish Cantabrian carbonates (Tohver et al., 2008, Earth Planet. Sci. Lett., v. 274, p. 524-530) and make good sense in accord with geological knowledge. Incremental fold tests are the tools used for this

  9. Synovial folds in the knee joint

    International Nuclear Information System (INIS)

    Schaefer, H.

    1987-01-01

    Stimulated by arthroscopic insight into central abnormalities of the knee joint and by the large number of unexplained case of 'anterior knee pain', we have studied the synovia in more than 2000 contrast examinations of the joint. Surprisingly, and contrary to the views expressed in the literature, the clinically significant plica parapatellaris medialis was seen as frequently during pneumo-arthrography as during more complex procedures. Abnormalities in the synovial fold emerged as a discreet disease identified as the 'medial shelf syndrome' and should be included in the differential diagnosis of causes of pain round the lower end of the femur and patella. (orig.) [de

  10. Tropical forest recovery from logging: a 24 year silvicultural experiment from Central Africa.

    Science.gov (United States)

    Gourlet-Fleury, Sylvie; Mortier, Frédéric; Fayolle, Adeline; Baya, Fidèle; Ouédraogo, Dakis; Bénédet, Fabrice; Picard, Nicolas

    2013-01-01

    Large areas of African moist forests are being logged in the context of supposedly sustainable management plans. It remains however controversial whether harvesting a few trees per hectare can be maintained in the long term while preserving other forest services as well. We used a unique 24 year silvicultural experiment, encompassing 10 4 ha plots established in the Central African Republic, to assess the effect of disturbance linked to logging (two to nine trees ha⁻¹ greater than or equal to 80 cm DBH) and thinning (11-41 trees ha⁻¹ greater than or equal to 50 cm DBH) on the structure and dynamics of the forest. Before silvicultural treatments, above-ground biomass (AGB) and timber stock (i.e. the volume of commercial trees greater than or equal to 80 cm DBH) in the plots amounted 374.5 ± 58.2 Mg ha⁻¹ and 79.7 ± 45.9 m³ ha⁻¹, respectively. We found that (i) natural control forest was increasing in AGB (2.58 ± 1.73 Mg dry mass ha⁻¹ yr⁻¹) and decreasing in timber stock (-0.33 ± 1.57 m³ ha⁻¹ yr⁻¹); (ii) the AGB recovered very quickly after logging and thinning, at a rate proportional to the disturbance intensity (mean recovery after 24 years: 144%). Compared with controls, the gain almost doubled in the logged plots (4.82 ± 1.22 Mg ha⁻¹ yr⁻¹) and tripled in the logged + thinned plots (8.03 ± 1.41 Mg ha⁻¹ yr⁻¹); (iii) the timber stock recovered slowly (mean recovery after 24 years: 41%), at a rate of 0.75 ± 0.51 m³ ha⁻¹ yr⁻¹ in the logged plots, and 0.81 ± 0.74 m³ ha⁻¹ yr⁻¹ in the logged + thinned plots. Although thinning significantly increased the gain in biomass, it had no effect on the gain in timber stock. However, thinning did foster the growth and survival of small- and medium-sized timber trees and should have a positive effect over the next felling cycle.

  11. Observations from borehole dilution logging experiments in fractured crystalline rock under variable hydraulic conditions

    Science.gov (United States)

    Harte, Philip T.; Anderson, Alton; Williams, John H.

    2014-01-01

    Identifying hydraulically active fractures in low permeability, crystalline-bedrock aquifers requires a variety of geophysical and hydrogeophysical borehole tools and approaches. One such approach is Single Borehole Dilution Tests (SBDT), which in some low flow cases have been shown to provide greater resolution of borehole flow than other logging procedures, such as vertical differential Heat Pulse Flowmeter (HPFM) logging. Because the tools used in SBDT collect continuous profiles of water quality or dye changes, they can identify horizontal flow zones and vertical flow. We used SBDT with a food grade blue dye as a tracer and dual photometer-nephelometer measurements to identify low flow zones.SBDT were conducted at seven wells with open boreholes (exceeding 300 ft). At most of the wells HPFM logs were also collected. The seven wells are set in low-permeability, fractured granite and gneiss rocks underlying a former tetrachloroeythylene (PCE) source area at the Savage Municipal Well Superfund site in Milford, NH. Time series SBDT logs were collected at each of the seven wells under three distinct hydraulic conditions: (1) ambient conditions prior to a pump test at an adjacent well, (2) mid test, after 2-3 days of the start of the pump test, and (3) at the end of the test, after 8-9 days of the pump test. None of the SBDT were conducted under pumping conditions in the logged well. For each condition, wells were initially passively spiked with blue dye once and subsequent time series measurements were made.Measurement accuracy and precision of the photometer tool is important in SBDT when attempting to detect low rates of borehole flow. Tests indicate that under ambient conditions, none of the wells had detectable flow as measured with HPFM logging. With SBDT, 4 of the 7 showed the presence of some very low flow. None of 5 (2 of the 7 wells initially logged with HPFM under ambient conditions were not re-logged) wells logged with the HPFM during the pump test had

  12. Simultaneous bilateral isolated greater trochanter fracture

    Directory of Open Access Journals (Sweden)

    Maruti Kambali

    2013-01-01

    Full Text Available A 48-year-old woman sustained simultaneous isolated bilateral greater trochanteric fracture, following a road traffic accident. The patient presented to us 1 month after the injury. She presented with complaints of pain in the left hip and inability to walk. Roentgenograms revealed displaced comminuted bilateral greater trochanter fractures. The fracture of the left greater trochanter was reduced and fixed internally using the tension band wiring technique. The greater trochanter fracture on the right side was asymptomatic and was managed conservatively. The patient regained full range of motion and use of her hips after a postoperative follow-up of 6 months. Isolated fractures of the greater trochanter are unusual injuries. Because of their relative rarity and the unsettled controversy regarding their etiology and pathogenesis, several methods of treatment have been advocated. Furthermore, the reports of this particular type of injury are not plentiful and the average textbook coverage afforded to this entity is limited. In our study we discuss the mechanism of injury and the various treatment options available.

  13. Folding model analysis of alpha radioactivity

    International Nuclear Information System (INIS)

    Basu, D N

    2003-01-01

    Radioactive decay of nuclei via emission of α-particles has been studied theoretically in the framework of a superasymmetric fission model using the double folding (DF) procedure for obtaining the α-nucleus interaction potential. The DF nuclear potential has been obtained by folding in the density distribution functions of the α nucleus and the daughter nucleus with a realistic effective interaction. The M3Y effective interaction has been used for calculating the nuclear interaction potential which has been supplemented by a zero-range pseudo-potential for exchange along with the density dependence. The nuclear microscopic α-nucleus potential thus obtained has been used along with the Coulomb interaction potential to calculate the action integral within the WKB approximation. This subsequently yields calculations for the half-lives of α decays of nuclei. The density dependence and the exchange effects have not been found to be very significant. These calculations provide reasonable estimates for the lifetimes of α-radioactivity of nuclei

  14. Specific features of well logging of boreholes drilled on electrical nonconducting solutions

    International Nuclear Information System (INIS)

    Ruchkin, A.F.; Fomenko, V.G.

    1978-01-01

    Methods for identification of permeable strata and determination of their porosity and oil-gas saturation using standard combination of geophysical investigations in the boreholes drilled with nonaqueous and inert drilling fluids are considered. Geophysical combination consists of the methods indications of which are independent on electrical conductivity of drilling fluids. They are all modifications of radioactivity logging (gamma logging, neutron logging, neutron-gamma logging, gamma-gamma logging, pulsed neutron logging, nuclear-magnetic logging), acoustic logging and thermal logging

  15. Development of an Intelligent System to Synthesize Petrophysical Well Logs

    Directory of Open Access Journals (Sweden)

    Morteza Nouri Taleghani

    2013-07-01

    Full Text Available Porosity is one of the fundamental petrophysical properties that should be evaluated for hydrocarbon bearing reservoirs. It is a vital factor in precise understanding of reservoir quality in a hydrocarbon field. Log data are exceedingly crucial information in petroleum industries, for many of hydrocarbon parameters are obtained by virtue of petrophysical data. There are three main petrophysical logging tools for the determination of porosity, namely neutron, density, and sonic well logs. Porosity can be determined by the use of each of these tools; however, a precise analysis requires a complete set of these tools. Log sets are commonly either incomplete or unreliable for many reasons (i.e. incomplete logging, measurement errors, and loss of data owing to unsuitable data storage. To overcome this drawback, in this study several intelligent systems such as fuzzy logic (FL, neural network (NN, and support vector machine are used to predict synthesized petrophysical logs including neutron, density, and sonic. To accomplish this, the petrophysical well logs data were collected from a real reservoir in one of Iran southwest oil fields. The corresponding correlation was obtained through the comparison of synthesized log values with real log values. The results showed that all intelligent systems were capable of synthesizing petrophysical well logs, but SVM had better accuracy and could be used as the most reliable method compared to the other techniques.

  16. Pulsed neutron uranium borehole logging with prompt fission neutrons

    International Nuclear Information System (INIS)

    Bivens, H.M.; Smith, G.W.; Jensen, D.H.

    1976-01-01

    The gross count natural gamma log normally used for uranium borehole logging is seriously affected by disequilibrium. Methods for the direct measurement of uranium, such as neutron logging, which are not affected by disequilibrium have been the object of considerable effort in recent years. This paper describes a logging system for uranium which uses a small accelerator to generate pulses of 14 MeV neutrons to detect and assay uranium by the measurement of prompt fission neutrons in the epithermal energy range. After an initial feasibility study, a prototype logging probe was built for field evaluation which began in January 1976. Physical and operational characteristics of the prototype probe, the neutron tube-transformer assembly, and the neutron tube are described. In logging operations, only the epithermal prompt fission neutrons detected between 250 microseconds to 2500 microseconds following the excitation neutron pulse are counted. Comparison of corrected neutron logs with the conventional gross count natural gamma logs and the chemical assays of cores from boreholes are shown. The results obtained with this neutron probe clearly demonstrate its advantages over the gross count natural gamma log, although at this time the accuracy of the neutron log assay is not satisfactory under some conditions. The necessary correction factors for various borehole and formation parameters are being determined and, when applied, should improve the assay accuracy

  17. Intelligent approaches for the synthesis of petrophysical logs

    International Nuclear Information System (INIS)

    Rezaee, M Reza; Kadkhodaie-Ilkhchi, Ali; Alizadeh, Pooya Mohammad

    2008-01-01

    Log data are of prime importance in acquiring petrophysical data from hydrocarbon reservoirs. Reliable log analysis in a hydrocarbon reservoir requires a complete set of logs. For many reasons, such as incomplete logging in old wells, destruction of logs due to inappropriate data storage and measurement errors due to problems with logging apparatus or hole conditions, log suites are either incomplete or unreliable. In this study, fuzzy logic and artificial neural networks were used as intelligent tools to synthesize petrophysical logs including neutron, density, sonic and deep resistivity. The petrophysical data from two wells were used for constructing intelligent models in the Fahlian limestone reservoir, Southern Iran. A third well from the field was used to evaluate the reliability of the models. The results showed that fuzzy logic and artificial neural networks were successful in synthesizing wireline logs. The combination of the results obtained from fuzzy logic and neural networks in a simple averaging committee machine (CM) showed a significant improvement in the accuracy of the estimations. This committee machine performed better than fuzzy logic or the neural network model in the problem of estimating petrophysical properties from well logs

  18. One less trip : logging with less tripping, more protection

    Energy Technology Data Exchange (ETDEWEB)

    Byfield, M.

    2005-12-15

    New logging technology by Datalog Technology Inc. was described. Logging-while-tripping (LWT) technology uses a slim petrophysical sensor package that is moved to the targeted geological formation through a drill pipe, which reduces the exposure to vibration and shock involved in logging-while-drilling (LWD). The equipment features standard components in a patented configuration and comes in 2 segments: the receiver sub and the sensor package electronics. A receiver sub is inserted into the bottomhole assembly at the end of the drill string. Drilling progresses with the LWT sub in the bottomhole assembly until the borehole approaches the logging depth. The sensor package and electronics are then lowered into the drill string. If the well is horizontal, rig pumps push the package into the drill string until it lands in the LWT sub. Drill pipes are moved across the zone of interest and logs are recorded on downhole memory contained within the LWT package. As the logging operation progresses, a depth recorder at the surface records depth information along with the downhole recorders. When logging is completed, downhole tools are retrieved, and data downloaded from the LWT onboard memory is merged with the surface depth information to generate well logs. Retrieval via the drill string greatly reduces the risk of losing the logging gear, which contains radioactive material. Federal officials now routinely insist on extensive fishing operations to retrieve lost tools. If a well gets a gas kick while logging is in progress, the operator can still pump down mud or close the blowout preventer rams if necessary, and save time in determining where to perforate shallow gas wells. Compensated neutron logs, gamma rays, spectrum gamma rays, and induction have been tested with the LWT system. It was concluded that Petro-Canada has deployed the logs recently and has achieved results that compared satisfactorily with conventional logs. 2 figs.

  19. The effect of vocal fold augmentation on cough symptoms in the presence of glottic insufficiency.

    Science.gov (United States)

    Litts, Juliana K; Fink, Daniel S; Clary, Matthew S

    2017-10-08

    To determine the effect of injection augmentation of the vocal folds on chronic cough symptoms in patients with glottic insufficiency. Medical records from 146 consecutive patients who underwent vocal fold injection augmentation by a fellowship-trained laryngologist between 2013 and 2015 were reviewed. Twenty-three patients (12 male) met inclusion criteria of a vocal fold augmentation injection, cough symptoms lasting more than 8 weeks, and glottic insufficiency as determined by shortened closed phase on stroboscopy. Exclusion criteria included lack of cough complaints, diagnosis of vocal fold immobility, previous history of vocal fold augmentation, and incomplete data sets. Data collected included age, gender, pre- and 1-month postinjection Cough Severity Index (CSI) scores, location of injection (unilateral or bilateral), and patient statement of percent change in symptoms that was recorded at 1-month postinjection visit. Paired t test indicated a significant decrease in CSI scores from pre- (m = 18.5) to 1-month postinjection (m = 12.1) (P = 0.004). Eighteen patients (78.2%) reported a 50% or greater improvement in cough symptoms at the 1-month postinjection visit. Injection augmentation of the vocal folds in the presence of glottic insufficiency appears to improve cough symptoms, as was reported by CSI in patients who are refractory to other medical and behavioral treatments. 4. Laryngoscope, 2017. © 2017 The American Laryngological, Rhinological and Otological Society, Inc.

  20. Vitrectomy and internal limiting membrane peeling for macular folds secondary to hypotony in myopes

    Directory of Open Access Journals (Sweden)

    Nadal J

    2015-05-01

    Full Text Available Jeroni Nadal,1–3 Elisa Carreras,2,3 Maria Isabel Canut,1–3 Rafael I Barraquer1–3 1Centro de Oftalmologia Barraquer, 2Universitat Autònoma de Barcelona, 3Instituto Barraquer, Barcelona, Spain Background: Hypotony maculopathy (HM changes may persist, and visual acuity remains poor, despite normalization of intraocular pressure (IOP. The aim of this study was to evaluate the visual and anatomical results of pars plana vitrectomy (PPV, internal limiting membrane (ILM peeling, and 20% SF6 gas tamponade in five myopic patients with HM.Methods: This retrospective interventional study was conducted at the Barraquer Center of Ophthalmology, a tertiary care center in Barcelona, Spain, and included five eyes from five consecutive patients (aged 55.4±13.1 years with HM caused by different conditions. All the patients were treated with 23-gauge PPV, ILM peeling, and 20% SF6 gas tamponade. Preoperative and postoperative evaluation was performed using anterior and posterior biomicroscopy and best corrected visual acuity (BCVA by logMAR charts.Results: Before surgery, median spherical equivalent was -13.1 (range -7, -19 diopters of myopia. Preoperatively, four cases presented IOP <6.5 mmHg for 3 (range 2–8 weeks. In three of these four cases, IOP >6.5 mmHg was achieved over 16 (range 16–28 weeks, without resolution of HM; increased IOP was not achieved in the remaining case treated 2 weeks after diagnosis of HM. One case presented IOP >6.5 mmHg with HM for 28 weeks before surgery. Preoperative BCVA was 0.7 (range 0.26–2.3 logMAR, and 0.6 (range 0.3–0.7 logMAR and 0.5 (range 0.2–1 logMAR, respectively, at 4 and 12 months after surgery. There was no statistically significant difference between preoperative and postoperative BCVA. Hyperpigmentation lines in the macular area were observed in three cases with hypotony. These lines progressed after surgery despite resolution of the retinal folds in the three cases, and BCVA decreased in parallel

  1. TH-AB-201-12: Using Machine Log-Files for Treatment Planning and Delivery QA

    Energy Technology Data Exchange (ETDEWEB)

    Stanhope, C [Beaumont Health System, Royal Oak MI and Wayne State University, Detroit, MI (United States); Liang, J; Drake, D; Yan, D [Beaumont Health System, Royal Oak, MI (United States)

    2016-06-15

    Purpose: To determine the segment reduction and dose resolution necessary for machine log-files to effectively replace current phantom-based patient-specific quality assurance, while minimizing computational cost. Methods: Elekta’s Log File Convertor R3.2 records linac delivery parameters (dose rate, gantry angle, leaf position) every 40ms. Five VMAT plans [4 H&N, 1 Pulsed Brain] comprised of 2 arcs each were delivered on the ArcCHECK phantom. Log-files were reconstructed in Pinnacle on the phantom geometry using 1/2/3/4° control point spacing and 2/3/4mm dose grid resolution. Reconstruction effectiveness was quantified by comparing 2%/2mm gamma passing rates of the original and log-file plans. Modulation complexity scores (MCS) were calculated for each beam to correlate reconstruction accuracy and beam modulation. Percent error in absolute dose for each plan-pair combination (log-file vs. ArcCHECK, original vs. ArcCHECK, log-file vs. original) was calculated for each arc and every diode greater than 10% of the maximum measured dose (per beam). Comparing standard deviations of the three plan-pair distributions, relative noise of the ArcCHECK and log-file systems was elucidated. Results: The original plans exhibit a mean passing rate of 95.1±1.3%. The eight more modulated H&N arcs [MCS=0.088±0.014] and two less modulated brain arcs [MCS=0.291±0.004] yielded log-file pass rates most similar to the original plan when using 1°/2mm [0.05%±1.3% lower] and 2°/3mm [0.35±0.64% higher] log-file reconstructions respectively. Log-file and original plans displayed percent diode dose errors 4.29±6.27% and 3.61±6.57% higher than measurement. Excluding the phantom eliminates diode miscalibration and setup errors; log-file dose errors were 0.72±3.06% higher than the original plans – significantly less noisy. Conclusion: For log-file reconstructed VMAT arcs, 1° control point spacing and 2mm dose resolution is recommended, however, less modulated arcs may allow less

  2. SVM-Fold: a tool for discriminative multi-class protein fold and superfamily recognition.

    Science.gov (United States)

    Melvin, Iain; Ie, Eugene; Kuang, Rui; Weston, Jason; Stafford, William Noble; Leslie, Christina

    2007-05-22

    Predicting a protein's structural class from its amino acid sequence is a fundamental problem in computational biology. Much recent work has focused on developing new representations for protein sequences, called string kernels, for use with support vector machine (SVM) classifiers. However, while some of these approaches exhibit state-of-the-art performance at the binary protein classification problem, i.e. discriminating between a particular protein class and all other classes, few of these studies have addressed the real problem of multi-class superfamily or fold recognition. Moreover, there are only limited software tools and systems for SVM-based protein classification available to the bioinformatics community. We present a new multi-class SVM-based protein fold and superfamily recognition system and web server called SVM-Fold, which can be found at http://svm-fold.c2b2.columbia.edu. Our system uses an efficient implementation of a state-of-the-art string kernel for sequence profiles, called the profile kernel, where the underlying feature representation is a histogram of inexact matching k-mer frequencies. We also employ a novel machine learning approach to solve the difficult multi-class problem of classifying a sequence of amino acids into one of many known protein structural classes. Binary one-vs-the-rest SVM classifiers that are trained to recognize individual structural classes yield prediction scores that are not comparable, so that standard "one-vs-all" classification fails to perform well. Moreover, SVMs for classes at different levels of the protein structural hierarchy may make useful predictions, but one-vs-all does not try to combine these multiple predictions. To deal with these problems, our method learns relative weights between one-vs-the-rest classifiers and encodes information about the protein structural hierarchy for multi-class prediction. In large-scale benchmark results based on the SCOP database, our code weighting approach

  3. Water saturation in shaly sands: logging parameters from log-derived values

    International Nuclear Information System (INIS)

    Miyairi, M.; Itoh, T.; Okabe, F.

    1976-01-01

    The methods are presented for determining the relation of porosity to formation factor and that of true resistivity of formation to water saturation, which were investigated through the log interpretation of one of the oil and gas fields of northern Japan Sea. The values of the coefficients ''a'' and ''m'' in porosity-formation factor relation are derived from cross-plot of porosity and resistivity of formation corrected by clay content. The saturation exponent ''n'' is determined from cross-plot of porosity and resistivity index on the assumption that the product of porosity and irreducible water saturation is constant. The relation of porosity to irreducible water saturation is also investigated from core analysis. The new logging parameters determined from the methods, a = 1, m = 2, n = 1.4, improved the values of water saturation by 6 percent in average, and made it easy to distinguish the points which belong to the productive zone and ones belonging to the nonproductive zone

  4. Greater trochanteric fracture with occult intertrochanteric extension.

    Science.gov (United States)

    Reiter, Michael; O'Brien, Seth D; Bui-Mansfield, Liem T; Alderete, Joseph

    2013-10-01

    Proximal femoral fractures are frequently encountered in the emergency department (ED). Prompt diagnosis is paramount as delay will exacerbate the already poor outcomes associated with these injuries. In cases where radiography is negative but clinical suspicion remains high, magnetic resonance imaging (MRI) is the study of choice as it has the capability to depict fractures which are occult on other imaging modalities. Awareness of a particular subset of proximal femoral fractures, namely greater trochanteric fractures, is vital for both radiologists and clinicians since it has been well documented that they invariably have an intertrochanteric component which may require surgical management. The detection of intertrochanteric or cervical extension of greater trochanteric fractures has been described utilizing MRI but is underestimated with both computed tomography (CT) and bone scan. Therefore, if MRI is unavailable or contraindicated, the diagnosis of an isolated greater trochanteric fracture should be met with caution. The importance of avoiding this potential pitfall is demonstrated in the following case of an elderly woman with hip pain and CT demonstrating an isolated greater trochanteric fracture who subsequently returned to the ED with a displaced intertrochanteric fracture.

  5. Butterfly valves: greater use in power plants

    International Nuclear Information System (INIS)

    McCoy, M.

    1975-01-01

    Improvements in butterfly valves, particularly in the areas of automatic control and leak tightness are described. The use of butterfly valves in nuclear power plants is discussed. These uses include service in component cooling, containment cooling, and containment isolation. The outlook for further improvements and greater uses is examined. (U.S.)

  6. Greater Somalia, the never-ending dream?

    DEFF Research Database (Denmark)

    Zoppi, Marco

    2015-01-01

    This paper provides an historical analysis of the concept of Greater Somalia, the nationalist project that advocates the political union of all Somali-speaking people, including those inhabiting areas in current Djibouti, Ethiopia and Kenya. The Somali territorial unification project of “lost...

  7. Dysphonia and vocal fold telangiectasia in hereditary hemorrhagic telangiectasia.

    Science.gov (United States)

    Chang, Joseph; Yung, Katherine C

    2014-11-01

    This case report is the first documentation of dysphonia and vocal fold telangiectasia as a complication of hereditary hemorrhagic telangiectasia (HHT). Case report of a 40-year-old man with HHT presenting with 2 years of worsening hoarseness. Hoarseness corresponded with a period of anticoagulation. Endoscopy revealed vocal fold scarring, vocal fold telangiectasias, and plica ventricular is suggestive of previous submucosal vocal fold hemorrhage and subsequent counterproductive compensation with ventricular phonation. Hereditary hemorrhagic telangiectasia may present as dysphonia with vocal fold telangiectasias and place patients at risk of vocal fold hemorrhage. © The Author(s) 2014.

  8. Factors limiting SOS expression in log-phase cells of Escherichia coli.

    Science.gov (United States)

    Massoni, Shawn C; Leeson, Michael C; Long, Jarukit Edward; Gemme, Kristin; Mui, Alice; Sandler, Steven J

    2012-10-01

    In Escherichia coli, RecA-single-stranded DNA (RecA-ssDNA) filaments catalyze DNA repair, recombination, and induction of the SOS response. It has been shown that, while many (15 to 25%) log-phase cells have RecA filaments, few (about 1%) are induced for SOS. It is hypothesized that RecA's ability to induce SOS expression in log-phase cells is repressed because of the potentially detrimental effects of SOS mutagenesis. To test this, mutations were sought to produce a population where the number of cells with SOS expression more closely equaled the number of RecA filaments. Here, it is shown that deleting radA (important for resolution of recombination structures) and increasing recA transcription 2- to 3-fold with a recAo1403 operator mutation act independently to minimally satisfy this condition. This allows 24% of mutant cells to have elevated levels of SOS expression, a percentage similar to that of cells with RecA-green fluorescent protein (RecA-GFP) foci. In an xthA (exonuclease III gene) mutant where there are 3-fold more RecA loading events, recX (a destabilizer of RecA filaments) must be additionally deleted to achieve a population of cells where the percentage having elevated SOS expression (91%) nearly equals the percentage with at least one RecA-GFP focus (83%). It is proposed that, in the xthA mutant, there are three independent mechanisms that repress SOS expression in log-phase cells. These are the rapid processing of RecA filaments by RadA, maintaining the concentration of RecA below a critical level, and the destabilizing of RecA filaments by RecX. Only the first two mechanisms operate independently in a wild-type cell.

  9. Fold classification based on secondary structure – how much is gained by including loop topology?

    Directory of Open Access Journals (Sweden)

    Przytycka Teresa

    2006-03-01

    Full Text Available Abstract Background It has been proposed that secondary structure information can be used to classify (to some extend protein folds. Since this method utilizes very limited information about the protein structure, it is not surprising that it has a higher error rate than the approaches that use full 3D fold description. On the other hand, the comparing of 3D protein structures is computing intensive. This raises the question to what extend the error rate can be decreased with each new source of information, especially if the new information can still be used with simple alignment algorithms. We consider the question whether the information about closed loops can improve the accuracy of this approach. While the answer appears to be obvious, we had to overcome two challenges. First, how to code and to compare topological information in such a way that local alignment of strings will properly identify similar structures. Second, how to properly measure the effect of new information in a large data sample. We investigate alternative ways of computing and presenting this information. Results We used the set of beta proteins with at most 30% pairwise identity to test the approach; local alignment scores were used to build a tree of clusters which was evaluated using a new log-odd cluster scoring function. In particular, we derive a closed formula for the probability of obtaining a given score by chance.Parameters of local alignment function were optimized using a genetic algorithm. Of 81 folds that had more than one representative in our data set, log-odds scores registered significantly better clustering in 27 cases and significantly worse in 6 cases, and small differences in the remaining cases. Various notions of the significant change or average change were considered and tried, and the results were all pointing in the same direction. Conclusion We found that, on average, properly presented information about the loop topology improves noticeably

  10. Folded tandem ion accelerator facility at BARC

    International Nuclear Information System (INIS)

    Agarwal, Arun; Padmakumar, Sapna; Subrahmanyam, N.B.V.; Singh, V.P.; Bhatt, J.P.; Ware, Shailaja V.; Pol, S.S; Basu, A.; Singh, S.K.; Krishnagopal, S.; Bhagwat, P.V.

    2017-01-01

    The 5.5 MV single stage Van de Graaff (VDG) accelerator was in continuous operation at Nuclear Physics Division (NPD), Bhabha Atomic Research Centre (BARC) since its inception in 1962. During 1993-96, VDG accelerator was converted to a Folded Tandem Ion Accelerator (FOTIA). The scientists and engineers of NPD, IADD (then a part of NPD) along with several other divisions of BARC joined hands together in designing, fabrication, installation and commissioning of the FOTIA for the maximum terminal voltage of 6 MV. After experiencing the first accelerated ion beam on the target from FOTIA during April 2000, different ion species were accelerated and tested. Now this accelerator FOTIA is in continuous use for different kind of experiments

  11. Electrotransfection of Polyamine Folded DNA Origami Structures.

    Science.gov (United States)

    Chopra, Aradhana; Krishnan, Swati; Simmel, Friedrich C

    2016-10-12

    DNA origami structures are artificial molecular nanostructures in which DNA double helices are forced into a closely packed configuration by a multitude of DNA strand crossovers. We show that three different types of origami structures (a flat sheet, a hollow tube, and a compact origami block) can be formed in magnesium-free buffer solutions containing low (origami folding is proportional to the DNA concentration. At excessive amounts, the structures aggregate and precipitate. In contrast to origami structures formed in conventional buffers, the resulting structures are stable in the presence of high electric field pulses, such as those commonly used for electrotransfection experiments. We demonstrate that spermidine-stabilized structures are stable in cell lysate and can be delivered into mammalian cells via electroporation.

  12. Some physical approaches to protein folding

    Science.gov (United States)

    Bascle, J.; Garel, T.; Orland, H.

    1993-02-01

    To understand how a protein folds is a problem which has important biological implications. In this article, we would like to present a physics-oriented point of view, which is twofold. First of all, we introduce simple statistical mechanics models which display, in the thermodynamic limit, folding and related transitions. These models can be divided into (i) crude spin glass-like models (with their Mattis analogs), where one may look for possible correlations between the chain self-interactions and the folded structure, (ii) glass-like models, where one emphasizes the geometrical competition between one- or two-dimensional local order (mimicking α helix or β sheet structures), and the requirement of global compactness. Both models are too simple to predict the spatial organization of a realistic protein, but are useful for the physicist and should have some feedback in other glassy systems (glasses, collapsed polymers .... ). These remarks lead us to the second physical approach, namely a new Monte-Carlo method, where one grows the protein atom-by-atom (or residue-by-residue), using a standard form (CHARMM .... ) for the total energy. A detailed comparison with other Monte-Carlo schemes, or Molecular Dynamics calculations, is then possible; we will sketch such a comparison for poly-alanines. Our twofold approach illustrates some of the difficulties one encounters in the protein folding problem, in particular those associated with the existence of a large number of metastable states. Le repliement des protéines est un problème qui a de nombreuses implications biologiques. Dans cet article, nous présentons, de deux façons différentes, un point de vue de physicien. Nous introduisons tout d'abord des modèles simples de mécanique statistique qui exhibent, à la limite thermodynamique, des transitions de repliement. Ces modèles peuvent être divisés en (i) verres de spin (éventuellement à la Mattis), où l'on peut chercher des corrélations entre les

  13. Human Adipose Tissue Derived Extracellular Matrix and Methylcellulose Hydrogels Augments and Regenerates the Paralyzed Vocal Fold.

    Directory of Open Access Journals (Sweden)

    Dong Wook Kim

    Full Text Available Vocal fold paralysis results from various etiologies and can induce voice changes, swallowing complications, and issues with aspiration. Vocal fold paralysis is typically managed using injection laryngoplasty with fat or synthetic polymers. Injection with autologous fat has shown excellent biocompatibility. However, it has several disadvantages such as unpredictable resorption rate, morbidities associated with liposuction procedure which has to be done in operating room under general anesthesia. Human adipose-derived extracellular matrix (ECM grafts have been reported to form new adipose tissue and have greater biostability than autologous fat graft. Here, we present an injectable hydrogel that is constructed from adipose tissue derived soluble extracellular matrix (sECM and methylcellulose (MC for use in vocal fold augmentation. Human sECM derived from adipose tissue was extracted using two major steps-ECM was isolated from human adipose tissue and was subsequently solubilized. Injectable sECM/MC hydrogels were prepared by blending of sECM and MC. Sustained vocal fold augmentation and symmetric vocal fold vibration were accomplished by the sECM/MC hydrogel in paralyzed vocal fold which were confirmed by laryngoscope, histology and a high-speed imaging system. There were increased number of collagen fibers and fatty granules at the injection site without significant inflammation or fibrosis. Overall, these results indicate that the sECM/MC hydrogel can enhance vocal function in paralyzed vocal folds without early resorption and has potential as a promising material for injection laryngoplasty for stable vocal fold augmentation which can overcome the shortcomings of autologous fat such as unpredictable duration and morbidity associated with the fat harvest.

  14. Human Adipose Tissue Derived Extracellular Matrix and Methylcellulose Hydrogels Augments and Regenerates the Paralyzed Vocal Fold.

    Science.gov (United States)

    Kim, Dong Wook; Kim, Eun Ji; Kim, Eun Na; Sung, Myung Whun; Kwon, Tack-Kyun; Cho, Yong Woo; Kwon, Seong Keun

    2016-01-01

    Vocal fold paralysis results from various etiologies and can induce voice changes, swallowing complications, and issues with aspiration. Vocal fold paralysis is typically managed using injection laryngoplasty with fat or synthetic polymers. Injection with autologous fat has shown excellent biocompatibility. However, it has several disadvantages such as unpredictable resorption rate, morbidities associated with liposuction procedure which has to be done in operating room under general anesthesia. Human adipose-derived extracellular matrix (ECM) grafts have been reported to form new adipose tissue and have greater biostability than autologous fat graft. Here, we present an injectable hydrogel that is constructed from adipose tissue derived soluble extracellular matrix (sECM) and methylcellulose (MC) for use in vocal fold augmentation. Human sECM derived from adipose tissue was extracted using two major steps-ECM was isolated from human adipose tissue and was subsequently solubilized. Injectable sECM/MC hydrogels were prepared by blending of sECM and MC. Sustained vocal fold augmentation and symmetric vocal fold vibration were accomplished by the sECM/MC hydrogel in paralyzed vocal fold which were confirmed by laryngoscope, histology and a high-speed imaging system. There were increased number of collagen fibers and fatty granules at the injection site without significant inflammation or fibrosis. Overall, these results indicate that the sECM/MC hydrogel can enhance vocal function in paralyzed vocal folds without early resorption and has potential as a promising material for injection laryngoplasty for stable vocal fold augmentation which can overcome the shortcomings of autologous fat such as unpredictable duration and morbidity associated with the fat harvest.

  15. Geophysical borehole logging in the unsaturated zone, Yucca Mountain, Nevada

    International Nuclear Information System (INIS)

    Schimschal, U.; Nelson, P.H.

    1991-01-01

    Borehole geophysical logging for site characterization in the volcanic rocks at the proposed nuclear waste repository at Yucca Mountain, Nevada, requires data collection under rather unusual conditions. Logging tools must operate in rugose, dry holes above the water table in the unsaturated zone. Not all logging tools will operate in this environment, therefore; careful consideration must be given to selection and calibration. A sample suite of logs is presented that demonstrates correlation of geological formations from borehole to borehole, the definition of zones of altered mineralogy, and the quantitative estimates of rock properties. The authors show the results of an exploratory calculation of porosity and water saturation based upon density and epithermal neutron logs. Comparison of the results with a few core samples is encouraging, particularly because the logs can provide continuous data in boreholes where core samples are not available

  16. Aespoe Hard Rock Laboratory. BIPS logging in borehole KAS09

    International Nuclear Information System (INIS)

    Gustafsson, Jaana; Gustafsson, Christer

    2010-01-01

    This report includes the data gained in BIPS logging performed at the Aespoe Hard Rock Laboratory. The logging operation presented here includes BIPS logging in the core drilled borehole KAS09. The objective for the BIPS logging was to observe the condition of KAS09 in order to restore the borehole in the hydrogeological monitoring programme.All measurements were conducted by Malaa Geoscience AB on October 9th 2009. The objective of the BIPS logging is to achieve information of the borehole including occurrence of rock types as well as determination of fracture distribution and orientation. This report describes the equipment used as well as the measurement procedures and data gained. For the BIPS survey, the result is presented as images. The basic conditions of the BIPS logging for geological mapping and orientation of structures are satisfying for borehole KAS09, although induced affects from the drilling on the borehole walls limit the visibility

  17. Aespoe Hard Rock Laboratory. BIPS logging in borehole KAS09

    Energy Technology Data Exchange (ETDEWEB)

    Gustafsson, Jaana; Gustafsson, Christer (Malaa Geoscience AB (Sweden))

    2010-01-15

    This report includes the data gained in BIPS logging performed at the Aespoe Hard Rock Laboratory. The logging operation presented here includes BIPS logging in the core drilled borehole KAS09. The objective for the BIPS logging was to observe the condition of KAS09 in order to restore the borehole in the hydrogeological monitoring programme.All measurements were conducted by Malaa Geoscience AB on October 9th 2009. The objective of the BIPS logging is to achieve information of the borehole including occurrence of rock types as well as determination of fracture distribution and orientation. This report describes the equipment used as well as the measurement procedures and data gained. For the BIPS survey, the result is presented as images. The basic conditions of the BIPS logging for geological mapping and orientation of structures are satisfying for borehole KAS09, although induced affects from the drilling on the borehole walls limit the visibility

  18. Geophysical well logging operations and log analysis in Geothermal Well Desert Peak No. B-23-1

    Energy Technology Data Exchange (ETDEWEB)

    Sethi, D.K.; Fertl, W.H.

    1980-03-01

    Geothermal Well Desert Peak No. B-23-1 was logged by Dresser Atlas during April/May 1979 to a total depth of 2939 m (9642 ft). A temperature of 209/sup 0/C (408/sup 0/F) was observed on the maximum thermometer run with one of the logging tools. Borehole tools rated to a maximum temperature of 204.4/sup 0/C (400/sup 0/F) were utilized for logging except for the Densilog tool, which was from the other set of borehole instruments, rated to a still higher temperature, i.e., 260/sup 0/C (500/sup 0/F). The quality of the logs recorded and the environmental effects on the log response have been considered. The log response in the unusual lithologies of igneous and metamorphic formations encountered in this well could be correlated with the drill cutting data. An empirical, statistical log interpretation approach has made it possible to obtain meaningful information on the rocks penetrated. Various crossplots/histograms of the corrected log data have been generated on the computer. These are found to provide good resolution between the lithological units in the rock sequence. The crossplotting techniques and the statistical approach were combined with the drill cutting descriptions in order to arrive at the lithological characteristics. The results of log analysis and recommendations for logging of future wells have been included.

  19. Circular induction accelerator for borehole logging

    International Nuclear Information System (INIS)

    Chen, F.K.; Bertozzi, W.; Corris, G.W.; Diamond, W.; Doucet, J.A.; Schweitzer, J.S.

    1992-01-01

    This patent describes a downhole logging sonde adapted to be moved through a borehole, a source of gamma rays in the sonde for irradiating earth formations traversed by the borehole, one or more gamma ray detectors for detecting gamma rays scattered back to the sonde from the irradiated earth formations, and means for transmitting signals representative of the detected gamma rays to the earth's surface for processing. This patent describes improvement in the gamma ray source comprises a magnetic induction particle accelerator, including: a magnetic circuit having a field magnet, generally circular opposed pole pieces, and a core magnet metal ions from the group consisting of Mn, Zn and Ni; an excitation circuit including a field coil surrounding the field magnet and the core magnet and a core coil surrounding the central axially leg of the core magnet; an annular acceleration chamber interposed between the pole pieces; means for applying time-varying acceleration voltage pulses across the primary excitation circuit; means for injecting charged particles into orbit within the acceleration chamber; means for compressing the particle orbits to trap particles within generally circular orbits within the acceleration chamber; means for generating a particle accelerating magnetic flux in the magnetic circuit; and means for ejecting charged particles from the generally circular orbits and into contact with a target to produce gamma ray photons

  20. Acoustic and Optical Televiewer Borehole Logging

    International Nuclear Information System (INIS)

    Ahmad Hasnulhadi Che Kamaruddin; Nik Marzukee Nik Ibrahim; Zaidi Ibrahim; Nurul Wahida Ahmad Khairuddin; Azmi Ibrahim

    2016-01-01

    This review paper is focused on Borehole Televiewer. Borehole Televiewer or (BHTV) was used to obtain high-resolution acoustical images from the borehole wall. A probe with a high resolution downward looking camera is used. The camera has specific optics (a conical mirror with a ring of bulbs) with just one shot needed to capture the entire borehole circumference as a 360 panoramic view. Settings similar to traditional cameras (exposure, quality, light, frame rate and resolution) make it effective in almost any type of borehole fluid. After each shot, a series of horizontal pixel strings are acquired, giving a rasterized RGB picture in real-time which is transmitted to the console and finally to a monitor. The orientation device embedded in the tool, which is made of 3 inclinometers and 3 magnetometers, allows the inclination and azimuth of the probe to be computed in real-time, correctly orienting the borehole images. Besides, Acoustic and Optical Televiewer has been introduced as its advanced in technological research. Its logging has been successfully applied to geotechnical investigations and mineral exploration (Schepers et al., 2001) due to advances in beam focusing, increased dynamic range, digital recording techniques, and digital data processing (Schepers, 1991). Thus, this paper will go through to the basic principle of (BHTV) as one type of data collection today. (author)

  1. MCNP capabilities for nuclear well logging calculations

    International Nuclear Information System (INIS)

    Forster, R.A.; Little, R.C.; Briesmeister, J.F.; Hendricks, J.S.

    1990-01-01

    The Los Alamos Radiation Transport Code System (LARTCS) consists of state-of-the-art Monte Carlo and discrete ordinates transport codes and data libraries. This paper discusses how the general-purpose continuous-energy Monte Carlo code MCNP (Monte Carlo neutron photon), part of the LARTCS, provides a computational predictive capability for many applications of interest to the nuclear well logging community. The generalized three-dimensional geometry of MCNP is well suited for borehole-tool models. SABRINA, another component of the LARTCS, is a graphics code that can be used to interactively create a complex MCNP geometry. Users can define many source and tally characteristics with standard MCNP features. The time-dependent capability of the code is essential when modeling pulsed sources. Problems with neutrons, photons, and electrons as either single particle or coupled particles can be calculated with MCNP. The physics of neutron and photon transport and interactions is modeled in detail using the latest available cross-section data

  2. Acoustic reflection log in transversely isotropic formations

    Science.gov (United States)

    Ronquillo Jarillo, G.; Markova, I.; Markov, M.

    2018-01-01

    We have calculated the waveforms of sonic reflection logging for a fluid-filled borehole located in a transversely isotropic rock. Calculations have been performed for an acoustic impulse source with the characteristic frequency of tens of kilohertz that is considerably less than the frequencies of acoustic borehole imaging tools. It is assumed that the borehole axis coincides with the axis of symmetry of the transversely isotropic rock. It was shown that the reflected wave was excited most efficiently at resonant frequencies. These frequencies are close to the frequencies of oscillations of a fluid column located in an absolutely rigid hollow cylinder. We have shown that the acoustic reverberation is controlled by the acoustic impedance of the rock Z = Vphρs for fixed parameters of the borehole fluid, where Vph is the velocity of horizontally propagating P-wave; ρs is the rock density. The methods of waveform processing to determine the parameters characterizing the reflected wave have been discussed.

  3. The review on tessellation origami inspired folded structure

    Science.gov (United States)

    Chu, Chai Chen; Keong, Choong Kok

    2017-10-01

    Existence of folds enhances the load carrying capacity of a folded structure which makes it suitable to be used for application where large open space is required such as large span roof structures and façade. Folded structure is closely related to origami especially the tessellation origami. Tessellation origami provides a folded configuration with facetted surface as a result from repeated folding pattern. Besides that, tessellation origami has flexible folding mechanism that produced a variety of 3-dimensional folded configurations. Despite the direct relationship between fold in origami and folded structure, the idea of origami inspired folded structure is not properly reviewed in the relevant engineering field. Hence, this paper aims to present the current studies from related discipline which has direct relation with application of tessellation origami in folded structure. First, tessellation origami is properly introduced and defined. Then, the review covers the topic on the origami tessellation design suitable for folded structure, its modeling and simulation method, and existing studies and applications of origami as folded structure is presented. The paper also includes the discussion on the current issues related to each topic.

  4. Improving Protein Fold Recognition by Deep Learning Networks

    Science.gov (United States)

    Jo, Taeho; Hou, Jie; Eickholt, Jesse; Cheng, Jianlin

    2015-12-01

    For accurate recognition of protein folds, a deep learning network method (DN-Fold) was developed to predict if a given query-template protein pair belongs to the same structural fold. The input used stemmed from the protein sequence and structural features extracted from the protein pair. We evaluated the performance of DN-Fold along with 18 different methods on Lindahl’s benchmark dataset and on a large benchmark set extracted from SCOP 1.75 consisting of about one million protein pairs, at three different levels of fold recognition (i.e., protein family, superfamily, and fold) depending on the evolutionary distance between protein sequences. The correct recognition rate of ensembled DN-Fold for Top 1 predictions is 84.5%, 61.5%, and 33.6% and for Top 5 is 91.2%, 76.5%, and 60.7% at family, superfamily, and fold levels, respectively. We also evaluated the performance of single DN-Fold (DN-FoldS), which showed the comparable results at the level of family and superfamily, compared to ensemble DN-Fold. Finally, we extended the binary classification problem of fold recognition to real-value regression task, which also show a promising performance. DN-Fold is freely available through a web server at http://iris.rnet.missouri.edu/dnfold.

  5. Improving Protein Fold Recognition by Deep Learning Networks.

    Science.gov (United States)

    Jo, Taeho; Hou, Jie; Eickholt, Jesse; Cheng, Jianlin

    2015-12-04

    For accurate recognition of protein folds, a deep learning network method (DN-Fold) was developed to predict if a given query-template protein pair belongs to the same structural fold. The input used stemmed from the protein sequence and structural features extracted from the protein pair. We evaluated the performance of DN-Fold along with 18 different methods on Lindahl's benchmark dataset and on a large benchmark set extracted from SCOP 1.75 consisting of about one million protein pairs, at three different levels of fold recognition (i.e., protein family, superfamily, and fold) depending on the evolutionary distance between protein sequences. The correct recognition rate of ensembled DN-Fold for Top 1 predictions is 84.5%, 61.5%, and 33.6% and for Top 5 is 91.2%, 76.5%, and 60.7% at family, superfamily, and fold levels, respectively. We also evaluated the performance of single DN-Fold (DN-FoldS), which showed the comparable results at the level of family and superfamily, compared to ensemble DN-Fold. Finally, we extended the binary classification problem of fold recognition to real-value regression task, which also show a promising performance. DN-Fold is freely available through a web server at http://iris.rnet.missouri.edu/dnfold.

  6. Cost of skid roads for arch logging in West Virginia

    Science.gov (United States)

    George R., Jr. Trimble; Carl R. Barr

    1960-01-01

    In the mountain hardwood country of the northern Appalachians, tree-length skidding with tractor and arch has proved to be economical logging. One essential part of this type of logging is that tree-length logs are winched to the skid roads: tractor and arch do not run around through the woods. Winching distance is commonly 200 to 300 feet; and occasionally an extra...

  7. Western tight gas sands advanced logging workshop proceedings

    Energy Technology Data Exchange (ETDEWEB)

    Jennings, J B; Carroll, Jr, H B [eds.

    1982-04-01

    An advanced logging research program is one major aspect of the Western Tight Sands Program. Purpose of this workshop is to help BETC define critical logging needs for tight gas sands and to allow free interchange of ideas on all aspects of the current logging research program. Sixteen papers and abstracts are included together with discussions. Separate abstracts have been prepared for the 12 papers. (DLC)

  8. An artificial intelligence approach to well log correlation

    International Nuclear Information System (INIS)

    Startzman, R.A.; Kuo, T.B.

    1986-01-01

    This paper shows how an expert computer system was developed to correlate two well logs in at least moderately difficult situations. A four step process was devised to process log trace information and apply a set of rules to identify zonal correlations. Some of the advantages and problems with the artificial intelligence approach are shown using field logs. The approach is useful and, if properly and systematically applied, it can result in good correlations

  9. RNAiFold: a web server for RNA inverse folding and molecular design.

    Science.gov (United States)

    Garcia-Martin, Juan Antonio; Clote, Peter; Dotu, Ivan

    2013-07-01

    Synthetic biology and nanotechnology are poised to make revolutionary contributions to the 21st century. In this article, we describe a new web server to support in silico RNA molecular design. Given an input target RNA secondary structure, together with optional constraints, such as requiring GC-content to lie within a certain range, requiring the number of strong (GC), weak (AU) and wobble (GU) base pairs to lie in a certain range, the RNAiFold web server determines one or more RNA sequences, whose minimum free-energy secondary structure is the target structure. RNAiFold provides access to two servers: RNA-CPdesign, which applies constraint programming, and RNA-LNSdesign, which applies the large neighborhood search heuristic; hence, it is suitable for larger input structures. Both servers can also solve the RNA inverse hybridization problem, i.e. given a representation of the desired hybridization structure, RNAiFold returns two sequences, whose minimum free-energy hybridization is the input target structure. The web server is publicly accessible at http://bioinformatics.bc.edu/clotelab/RNAiFold, which provides access to two specialized servers: RNA-CPdesign and RNA-LNSdesign. Source code for the underlying algorithms, implemented in COMET and supported on linux, can be downloaded at the server website.

  10. Glycoprotein folding and quality-control mechanisms in protein-folding diseases

    Directory of Open Access Journals (Sweden)

    Sean P. Ferris

    2014-03-01

    Full Text Available Biosynthesis of proteins – from translation to folding to export – encompasses a complex set of events that are exquisitely regulated and scrutinized to ensure the functional quality of the end products. Cells have evolved to capitalize on multiple post-translational modifications in addition to primary structure to indicate the folding status of nascent polypeptides to the chaperones and other proteins that assist in their folding and export. These modifications can also, in the case of irreversibly misfolded candidates, signal the need for dislocation and degradation. The current Review focuses on the glycoprotein quality-control (GQC system that utilizes protein N-glycosylation and N-glycan trimming to direct nascent glycopolypeptides through the folding, export and dislocation pathways in the endoplasmic reticulum (ER. A diverse set of pathological conditions rooted in defective as well as over-vigilant ER quality-control systems have been identified, underlining its importance in human health and disease. We describe the GQC pathways and highlight disease and animal models that have been instrumental in clarifying our current understanding of these processes.

  11. Effect of Vocal Fold Medialization on Dysphagia in Patients with Unilateral Vocal Fold Immobility.

    Science.gov (United States)

    Cates, Daniel J; Venkatesan, Naren N; Strong, Brandon; Kuhn, Maggie A; Belafsky, Peter C

    2016-09-01

    The effect of vocal fold medialization (VFM) on vocal improvement in persons with unilateral vocal fold immobility (UVFI) is well established. The effect of VFM on the symptom of dysphagia is uncertain. The purpose of this study is to evaluate dysphagia symptoms in patients with UVFI pre- and post-VFM. Case series with chart review. Academic tertiary care medical center. The charts of 44 persons with UVFI who underwent VFM between June 1, 2013, and December 31, 2014, were abstracted from a prospectively maintained database at the University of California, Davis, Voice and Swallowing Center. Patient demographics, indications, and type of surgical procedure were recorded. Self-reported swallowing impairment was assessed with the validated 10-item Eating Assessment Tool (EAT-10) before and after surgery. A paired samples t test was used to compare pre- and postmedialization EAT-10 scores. Forty-four patients met criteria and underwent either vocal fold injection (73%) or thyroplasty (27%). Etiologies of vocal fold paralysis were iatrogenic (55%), idiopathic (29%), benign or malignant neoplastic (9%), traumatic (5%), or related to the late effects of radiation (2%). EAT-10 (mean ± SD) scores improved from 12.2 ± 11.1 to 7.7 ± 7.2 after medialization (P dysphagia and report significant improvement in swallowing symptoms following VFM. The symptomatic improvement appears to be durable over time. © American Academy of Otolaryngology—Head and Neck Surgery Foundation 2016.

  12. Towards an entropy-based analysis of log variability

    DEFF Research Database (Denmark)

    Back, Christoffer Olling; Debois, Søren; Slaats, Tijs

    2017-01-01

    the development of hybrid miners: given a (sub-)log, can we determine a priori whether the log is best suited for imperative or declarative mining? We propose using the concept of entropy, commonly used in information theory. We consider different measures for entropy that could be applied and show through...... experimentation on both synthetic and real-life logs that these entropy measures do indeed give insights into the complexity of the log and can act as an indicator of which mining paradigm should be used....

  13. Towards an Entropy-based Analysis of Log Variability

    DEFF Research Database (Denmark)

    Back, Christoffer Olling; Debois, Søren; Slaats, Tijs

    2018-01-01

    the development of hybrid miners: given a log, can we determine a priori whether the log is best suited for imperative or declarative mining? We propose using the concept of entropy, commonly used in information theory. We consider different measures for entropy that could be applied and show through...... experimentation on both synthetic and real-life logs that these entropy measures do indeed give insights into the complexity of the log and can act as an indicator of which mining paradigm should be used....

  14. Real Time Face Quality Assessment for Face Log Generation

    DEFF Research Database (Denmark)

    Kamal, Nasrollahi; Moeslund, Thomas B.

    2009-01-01

    Summarizing a long surveillance video to just a few best quality face images of each subject, a face-log, is of great importance in surveillance systems. Face quality assessment is the back-bone for face log generation and improving the quality assessment makes the face logs more reliable....... Developing a real time face quality assessment system using the most important facial features and employing it for face logs generation are the concerns of this paper. Extensive tests using four databases are carried out to validate the usability of the system....

  15. Self-folding origami at any energy scale

    Science.gov (United States)

    Pinson, Matthew B.; Stern, Menachem; Carruthers Ferrero, Alexandra; Witten, Thomas A.; Chen, Elizabeth; Murugan, Arvind

    2017-05-01

    Programmable stiff sheets with a single low-energy folding motion have been sought in fields ranging from the ancient art of origami to modern meta-materials research. Despite such attention, only two extreme classes of crease patterns are usually studied; special Miura-Ori-based zero-energy patterns, in which crease folding requires no sheet bending, and random patterns with high-energy folding, in which the sheet bends as much as creases fold. We present a physical approach that allows systematic exploration of the entire space of crease patterns as a function of the folding energy. Consequently, we uncover statistical results in origami, finding the entropy of crease patterns of given folding energy. Notably, we identify three classes of Mountain-Valley choices that have widely varying `typical' folding energies. Our work opens up a wealth of experimentally relevant self-folding origami designs not reliant on Miura-Ori, the Kawasaki condition or any special symmetry in space.

  16. Kinematics of large scale asymmetric folds and associated smaller ...

    Indian Academy of Sciences (India)

    The present work reiterates the importance of analysis of ... these models is the assumption that the folds are passive folds ... applicability of these models is thus limited in the case of ...... with contrasted rheological properties, a theory for the.

  17. Phonosurgery of vocal fold polyps, cysts and nodules is beneficial

    DEFF Research Database (Denmark)

    Jensen, Jane Bjerg; Rasmussen, Niels

    2013-01-01

    This study reports our experience with microscopic phonosurgery (PS) of benign lesions of the vocal folds.......This study reports our experience with microscopic phonosurgery (PS) of benign lesions of the vocal folds....

  18. Utilization of wind energy in greater Hanover

    International Nuclear Information System (INIS)

    Sahling, U.

    1993-01-01

    Since the beginning of the Eighties, the association of communities of Greater Hanover has dealt intensively with energy and ecopolitical questions in the scope of regional planning. Renewable energy sources play a dominant role in this context. This brochure is the third contribution to the subject ''Energy policy and environmental protection''. Experts as well as possibly interested parties are addressed especially. For all 8 contributions contained, separate entries have been recorded in this database. (BWI) [de

  19. Small cities face greater impact from automation

    OpenAIRE

    Frank, Morgan R.; Sun, Lijun; Cebrian, Manuel; Youn, Hyejin; Rahwan, Iyad

    2017-01-01

    The city has proven to be the most successful form of human agglomeration and provides wide employment opportunities for its dwellers. As advances in robotics and artificial intelligence revive concerns about the impact of automation on jobs, a question looms: How will automation affect employment in cities? Here, we provide a comparative picture of the impact of automation across U.S. urban areas. Small cities will undertake greater adjustments, such as worker displacement and job content su...

  20. The Greater Sekhukhune-CAPABILITY outreach project.

    Science.gov (United States)

    Gregersen, Nerine; Lampret, Julie; Lane, Tony; Christianson, Arnold

    2013-07-01

    The Greater Sekhukhune-CAPABILITY Outreach Project was undertaken in a rural district in Limpopo, South Africa, as part of the European Union-funded CAPABILITY programme to investigate approaches for capacity building for the translation of genetic knowledge into care and prevention of congenital disorders. Based on previous experience of a clinical genetic outreach programme in Limpopo, it aimed to initiate a district clinical genetic service in Greater Sekhukhune to gain knowledge and experience to assist in the implementation and development of medical genetic services in South Africa. Implementing the service in Greater Sekhukhune was impeded by a developing staff shortage in the province and pressure on the health service from the existing HIV/AIDS and TB epidemics. This situation underscores the need for health needs assessment for developing services for the care and prevention of congenital disorders in middle- and low-income countries. However, these impediments stimulated the pioneering of innovate ways to offer medical genetic services in these circumstances, including tele-teaching of nurses and doctors, using cellular phones to enhance clinical care and adapting and assessing the clinical utility of a laboratory test, QF-PCR, for use in the local circumstances.

  1. Operational technology for greater confinement disposal

    International Nuclear Information System (INIS)

    Dickman, P.T.; Vollmer, A.T.; Hunter, P.H.

    1984-12-01

    Procedures and methods for the design and operation of a greater confinement disposal facility using large-diameter boreholes are discussed. It is assumed that the facility would be located at an operating low-level waste disposal site and that only a small portion of the wastes received at the site would require greater confinement disposal. The document is organized into sections addressing: facility planning process; facility construction; waste loading and handling; radiological safety planning; operations procedures; and engineering cost studies. While primarily written for low-level waste management site operators and managers, a detailed economic assessment section is included that should assist planners in performing cost analyses. Economic assessments for both commercial and US government greater confinement disposal facilities are included. The estimated disposal costs range from $27 to $104 per cubic foot for a commercial facility and from $17 to $60 per cubic foot for a government facility. These costs are based on average site preparation, construction, and waste loading costs for both contact- and remote-handled wastes. 14 figures, 22 tables

  2. Systematic logging utilizing a log sheet designed for drill core descriptions. An example in uranium exploration activities

    International Nuclear Information System (INIS)

    Sasao, Eiji; Tsuruta, Tadahiko; Iida, Yoshimasa

    2000-01-01

    We describe the log sheets used during uranium exploration activities for unconformity-related uranium deposits by JNC. The purpose of using the logging sheets is to standardize the objects which all geologists must observe and for data quality assurance. The log sheets are a three-part set describing basement lithology, sandstone lithology and geotechnics. We devised our own log sheets to describe both the sandstone and the underlying basement rock when we started exploration in Athabasca Basin, Canada. We modified the sheets to gain a better understanding of the geological features related to uranium mineralization, and made final improvements to satisfy required quality based on the criteria of descriptive objects and accuracy. Use of the log sheets resulted in effective performance of core logging and improvement in the display of data. (author)

  3. Diagnostic and therapeutic pitfalls in benign vocal fold diseases

    Science.gov (United States)

    Bohlender, Jörg

    2013-01-01

    More than half of patients presenting with hoarseness show benign vocal fold changes. The clinician should be familiar with the anatomy, physiology and functional aspects of voice disorders and also the modern diagnostic and therapeutic possibilities in order to ensure an optimal and patient specific management. This review article focuses on the diagnostic and therapeutic limitations and difficulties of treatment of benign vocal fold tumors, the management and prevention of scarred vocal folds and the issue of unilateral vocal fold paresis. PMID:24403969

  4. Folds in multilayered rocks of Proterozoic age, Rajasthan, India

    Indian Academy of Sciences (India)

    R. Narasimhan (Krishtel eMaging) 1461 1996 Oct 15 13:05:22

    Johnson and Johnson 2002 etc) shows that the fold shape modification may be brought about by buckling and flattening operating simultaneously throughout the development of fold. In the present paper a series of F1 folds devel- oped in slates with interlayered alternations with quartzite of Proterozoic age and unaffected ...

  5. Nomenclature proposal to describe vocal fold motion impairment

    NARCIS (Netherlands)

    Rosen, Clark A.; Mau, Ted; Remacle, Marc; Hess, Markus; Eckel, Hans E.; Young, VyVy N.; Hantzakos, Anastasios; Yung, Katherine C.; Dikkers, Frederik G.

    2016-01-01

    The terms used to describe vocal fold motion impairment are confusing and not standardized. This results in a failure to communicate accurately and to major limitations of interpreting research studies involving vocal fold impairment. We propose standard nomenclature for reporting vocal fold

  6. Nomenclature proposal to describe vocal fold motion impairment

    NARCIS (Netherlands)

    Rosen, Clark A.; Mau, Ted; Remacle, Marc; Hess, Markus; Eckel, Hans E.; Young, VyVy N.; Hantzakos, Anastasios; Yung, Katherine C.; Dikkers, Frederik G.

    The terms used to describe vocal fold motion impairment are confusing and not standardized. This results in a failure to communicate accurately and to major limitations of interpreting research studies involving vocal fold impairment. We propose standard nomenclature for reporting vocal fold

  7. Technique to achieve the symmetry of the new inframammary fold

    Science.gov (United States)

    Pozzi, Marcello; Zoccali, Giovanni; Buccheri, Ernesto Maria; de Vita, Roy

    2014-01-01

    Summary The literature outlines several surgical techniques to restore inframmammary fold definition, but symmetry of the fold is often left to irreproducible procedures. We report our personal technique to restore the symmetry of the inframmammary fold during multistep breast reconstruction. PMID:25078934

  8. Static dictionaries on AC0 RAMs: query time (√log n/log log n) is necessary and sufficient

    DEFF Research Database (Denmark)

    Andersson, Arne; Miltersen, Peter Bro; Riis, Søren

    1996-01-01

    ) on the time for answering membership queries in a set of size n when reasonable space is used for the data structure storing the set; the upper bound can be obtained using O(n) space, and the lower bound holds even if we allow space 2polylog n. Several variations of this result are also obtained. Among others......, we show a tradeoff between time and circuit depth under the unit-cost assumption: any RAM instruction set which permits a linear space, constant query time solution to the static dictionary problem must have an instruction of depth Ω(log w/log log to), where w is the word size of the machine (and log...

  9. Folding very short peptides using molecular dynamics.

    Directory of Open Access Journals (Sweden)

    Bosco K Ho

    2006-04-01

    Full Text Available Peptides often have conformational preferences. We simulated 133 peptide 8-mer fragments from six different proteins, sampled by replica-exchange molecular dynamics using Amber7 with a GB/SA (generalized-Born/solvent-accessible electrostatic approximation to water implicit solvent. We found that 85 of the peptides have no preferred structure, while 48 of them converge to a preferred structure. In 85% of the converged cases (41 peptides, the structures found by the simulations bear some resemblance to their native structures, based on a coarse-grained backbone description. In particular, all seven of the beta hairpins in the native structures contain a fragment in the turn that is highly structured. In the eight cases where the bioinformatics-based I-sites library picks out native-like structures, the present simulations are largely in agreement. Such physics-based modeling may be useful for identifying early nuclei in folding kinetics and for assisting in protein-structure prediction methods that utilize the assembly of peptide fragments.

  10. Delayed Collapse of Wooden Folding Stairs

    Science.gov (United States)

    Krentowski, Janusz; Chyzy, Tadeusz

    2017-10-01

    During operation of folding stairs, a fastener joining the ladder hanger with the frame was torn off. A person using the stairs sustained serious injury. In several dozen other locations similar accidents were observed. As a result of inspections, some threaded parts of the screws were found in the gaps between the wooden elements of the stairs’ flaps. In the construction a hatch made of wooden strips is attached to an external frame by means of metal hangers. Laboratory strength tests were conducted on three samples made of wooden elements identical to the ones used in the damaged stairs. Due to complex load distribution mechanism acting on the base of the structure, a three-dimensional FEM model was created. An original software was used for calculations. Five computational model variants were considered. As a result of the numerical analyses, it was unquestionably shown that faulty connections were the cause of the destruction of the stairs. The weakest link in the load transmission chain were found to have been the screws connecting the hatch board with the hangers.

  11. Folding and unfolding phylogenetic trees and networks.

    Science.gov (United States)

    Huber, Katharina T; Moulton, Vincent; Steel, Mike; Wu, Taoyang

    2016-12-01

    Phylogenetic networks are rooted, labelled directed acyclic graphswhich are commonly used to represent reticulate evolution. There is a close relationship between phylogenetic networks and multi-labelled trees (MUL-trees). Indeed, any phylogenetic network N can be "unfolded" to obtain a MUL-tree U(N) and, conversely, a MUL-tree T can in certain circumstances be "folded" to obtain aphylogenetic network F(T) that exhibits T. In this paper, we study properties of the operations U and F in more detail. In particular, we introduce the class of stable networks, phylogenetic networks N for which F(U(N)) is isomorphic to N, characterise such networks, and show that they are related to the well-known class of tree-sibling networks. We also explore how the concept of displaying a tree in a network N can be related to displaying the tree in the MUL-tree U(N). To do this, we develop aphylogenetic analogue of graph fibrations. This allows us to view U(N) as the analogue of the universal cover of a digraph, and to establish a close connection between displaying trees in U(N) and reconciling phylogenetic trees with networks.

  12. Greater happiness for a greater number: Is that possible in Austria?

    NARCIS (Netherlands)

    R. Veenhoven (Ruut)

    2011-01-01

    textabstractWhat is the final goal of public policy? Jeremy Bentham (1789) would say: greater happiness for a greater number. He thought of happiness as subjective enjoyment of life; in his words as “the sum of pleasures and pains”. In his time the happiness of the great number could not be measured

  13. Greater happiness for a greater number: Is that possible? If so how? (Arabic)

    NARCIS (Netherlands)

    R. Veenhoven (Ruut); E. Samuel (Emad)

    2012-01-01

    textabstractWhat is the final goal of public policy? Jeremy Bentham (1789) would say: greater happiness for a greater number. He thought of happiness as subjective enjoyment of life; in his words as “the sum of pleasures and pains”. In his time, the happiness of the great number could not be

  14. Greater happiness for a greater number: Is that possible in Germany?

    NARCIS (Netherlands)

    R. Veenhoven (Ruut)

    2009-01-01

    textabstractWhat is the final goal of public policy? Jeremy Bentham (1789) would say: greater happiness for a greater number. He thought of happiness as subjective enjoyment of life; in his words as “the sum of pleasures and pains”. In his time the Happiness of the great number could not be measured

  15. The pathophysiology of the nodular and micronodular small bowel fold

    International Nuclear Information System (INIS)

    Olmsted, W.W.; Ros, P.R.; Moser, R.P.; Shekita, K.M.; Lichtenstein, J.E.

    1986-01-01

    The normal small bowel fold is easily seen on conventional studies of the small intestine, but visualization of the small bowel villus is at the limit of resolution of current roentgenographic technique. When the villi are enlarged, they appear radiographically as an irregularity or micronodularity of the small bowel fold. The anatomy of the fold and the pathophysiology of diseases producing fold nodularity (tumor,inflammatory disease, NLH, mastocytosis) and micronodularity (lymphangiectasia, Waldenstrom macroglobulinemia, Whipple disease) are presented, with an emphasis on radiologic-pathologic correlation. The radiologist should suggest certain diseases or conditions based on the roentgenographic characteristics of the closely analyzed small bowel fold

  16. Pathophysiology of the nodular and micronodular small bowel fold

    International Nuclear Information System (INIS)

    Olmstead, W.W.; Ros, P.R.; Moser, R.P.; Shekitka, K.M.; Lichtenstein, J.E.; Buck, J.L.

    1987-01-01

    The normal small bowel fold is easily seen on conventional studies of the small intestine, but visualization of the small bowel villus is just at the resolution of current roentgenographic technique. When the villi are enlarged, they can be seen radiographically as an irregularity or micronodularity of the small bowel fold. The anatomy of the fold and the pathophysiology of diseases producing fold nodularity (tumor, inflammatory disease, NLH, mastocytosis) and micronodularity (lymphangiectasia, Waldenstrom macroglobulinemia, Whipple disease) are presented, with an emphasis on radiologic-pathologic correlation. The radiologist should suggest certain diseases or conditions based on the roentgenographic characteristics of the closely analyzed small bowel fold

  17. Logging a roadside stand to protect scenic values

    Science.gov (United States)

    Philip M. McDonald; Raymond V. Whiteley

    1972-01-01

    A case study on the Challenge Experimental Forest, California, demonstrated that logging along roadsides need not despoil roadside stands. Nearly every tree was "viewed" before marking. Because of the "special-care" procedures followed, combined logging and slash-disposal cost was about twice that of a single-tree selection cut.

  18. Condition and fate of logged forests in the Brazilian Amazon.

    Science.gov (United States)

    Gregory P. Asner; Eben N. Broadbent; Paulo J. C. Oliveira; Michael Keller; David E. Knapp; Jose N. M. Silva

    2006-01-01

    The long-term viability of a forest industry in the Amazon region of Brazil depends on the maintenance of adequate timber volume and growth in healthy forests. Using extensive high-resolution satellite analyses, we studied the forest damage caused by recent logging operations and the likelihood that logged forests would be cleared within 4 years after timber harvest....

  19. Veneer-log production and receipts, North Central Region, 1976.

    Science.gov (United States)

    James E. Blyth; Jerold T. Hahn

    1978-01-01

    Shows 1976 veneer-log production and receipts by species in the Lake States (Michigan, Minnesota, and Wisconsin) and in the Central States (Illinois, Indiana, Iowa, and Missouri). Comparisons are made with similar data for 1974. Includes tables showing veneer-log production and receipts (for selected years) since 1946 in the Lake States and since 1956 in the Central...

  20. Veneer-log production and receipts, North Central Region, 1974.

    Science.gov (United States)

    James E. Blyth; Jerold T. Hahn

    1976-01-01

    Shows 1974 veneer-log production and receipts by species in the Lake States (Michigan, Minnesota, and Wisconsin) and in the Central States (Illinois, Indiana, Iowa, and Missouri). Comparisons are made with similar data for 1972. Includes tables showing veneer-log production and receipts (for selected years) since 1946 in the Lake States and since 1956 in the Central...

  1. A selective logging mechanism for hardware transactional memory systems

    OpenAIRE

    Lupon Navazo, Marc; Magklis, Grigorios; González Colás, Antonio María

    2011-01-01

    Log-based Hardware Transactional Memory (HTM) systems offer an elegant solution to handle speculative data that overflow transactional L1 caches. By keeping the pre-transactional values on a software-resident log, speculative values can be safely moved across the memory hierarchy, without requiring expensive searches on L1 misses or commits.

  2. Teaching an Old Log New Tricks with Machine Learning.

    Science.gov (United States)

    Schnell, Krista; Puri, Colin; Mahler, Paul; Dukatz, Carl

    2014-03-01

    To most people, the log file would not be considered an exciting area in technology today. However, these relatively benign, slowly growing data sources can drive large business transformations when combined with modern-day analytics. Accenture Technology Labs has built a new framework that helps to expand existing vendor solutions to create new methods of gaining insights from these benevolent information springs. This framework provides a systematic and effective machine-learning mechanism to understand, analyze, and visualize heterogeneous log files. These techniques enable an automated approach to analyzing log content in real time, learning relevant behaviors, and creating actionable insights applicable in traditionally reactive situations. Using this approach, companies can now tap into a wealth of knowledge residing in log file data that is currently being collected but underutilized because of its overwhelming variety and volume. By using log files as an important data input into the larger enterprise data supply chain, businesses have the opportunity to enhance their current operational log management solution and generate entirely new business insights-no longer limited to the realm of reactive IT management, but extending from proactive product improvement to defense from attacks. As we will discuss, this solution has immediate relevance in the telecommunications and security industries. However, the most forward-looking companies can take it even further. How? By thinking beyond the log file and applying the same machine-learning framework to other log file use cases (including logistics, social media, and consumer behavior) and any other transactional data source.

  3. The log-linear return approximation, bubbles, and predictability

    DEFF Research Database (Denmark)

    Engsted, Tom; Pedersen, Thomas Quistgaard; Tanggaard, Carsten

    We study in detail the log-linear return approximation introduced by Campbell and Shiller (1988a). First, we derive an upper bound for the mean approximation error, given stationarity of the log dividendprice ratio. Next, we simulate various rational bubbles which have explosive conditional expec...

  4. The Log-Linear Return Approximation, Bubbles, and Predictability

    DEFF Research Database (Denmark)

    Engsted, Tom; Pedersen, Thomas Quistgaard; Tanggaard, Carsten

    2012-01-01

    We study in detail the log-linear return approximation introduced by Campbell and Shiller (1988a). First, we derive an upper bound for the mean approximation error, given stationarity of the log dividend-price ratio. Next, we simulate various rational bubbles which have explosive conditional expe...

  5. Predictive models of forest logging residues of Triplochiton ...

    African Journals Online (AJOL)

    The model developed indicated that logarithmic functions performed better than other form of equation. The findings of this study revealed that there is significant logging residues left to waste in the forest after timber harvest and quantifying this logging residue in terms of biomass model can serve as management tools in ...

  6. Secure Audit Logging with Tamper-Resistant Hardware

    NARCIS (Netherlands)

    Chong, C.N.; Peng, Z.; Peng, Z.; Hartel, Pieter H.; Gritzalis, D.; De Capitani di Vimercati, S.; Katsikas, S.K.; Samarati, P.

    Secure perimeter schemes (e.g. DRM) and tracing traitor schemes (e.g. watermarking, audit logging) strive to mitigate the problems of content escaping the control of the rights holder. Secure audit logging records the user's actions on content and enables detection of some forms of tampering with

  7. Ubiquitous Learning Project Using Life-Logging Technology in Japan

    Science.gov (United States)

    Ogata, Hiroaki; Hou, Bin; Li, Mengmeng; Uosaki, Noriko; Mouri, Kosuke; Liu, Songran

    2014-01-01

    A Ubiquitous Learning Log (ULL) is defined as a digital record of what a learner has learned in daily life using ubiquitous computing technologies. In this paper, a project which developed a system called SCROLL (System for Capturing and Reusing Of Learning Log) is presented. The aim of developing SCROLL is to help learners record, organize,…

  8. 14 CFR 125.407 - Maintenance log: Airplanes.

    Science.gov (United States)

    2010-01-01

    ... 14 Aeronautics and Space 3 2010-01-01 2010-01-01 false Maintenance log: Airplanes. 125.407 Section... OPERATIONS: AIRPLANES HAVING A SEATING CAPACITY OF 20 OR MORE PASSENGERS OR A MAXIMUM PAYLOAD CAPACITY OF 6... Maintenance log: Airplanes. (a) Each person who takes corrective action or defers action concerning a reported...

  9. Ontology-driven extraction of event logs from relational databases

    NARCIS (Netherlands)

    Calvanese, Diego; Montali, Marco; Syamsiyah, Alifah; van der Aalst, Wil M P; Reichert, M.; Reijers, H.A.

    2015-01-01

    Process mining is an emerging discipline whose aim is to discover, monitor and improve real processes by extracting knowledge from event logs representing actual process executions in a given organizational setting. In this light, it can be applied only if faithful event logs, adhering to accepted

  10. Prediction of Log "P": ALOGPS Application in Medicinal Chemistry Education

    Science.gov (United States)

    Kujawski, Jacek; Bernard, Marek K.; Janusz, Anna; Kuzma, Weronika

    2012-01-01

    Molecular hydrophobicity (lipophilicity), usually quantified as log "P" where "P" is the partition coefficient, is an important molecular characteristic in medicinal chemistry and drug design. The log "P" coefficient is one of the principal parameters for the estimation of lipophilicity of chemical compounds and pharmacokinetic properties. The…

  11. Log-periodic dipole antenna with low cross-polarization

    DEFF Research Database (Denmark)

    Pivnenko, Sergey

    2006-01-01

    In this work, log-periodic antennas with improved cross-polarization level were studied. It was found that some modifications of the traditional design lead to an essential improvement of the co-to-cross polarization ratio up to 40 dB. An improved design of a log-periodic dipole antenna with low...

  12. The analog CTS communication interface in nuclear logging

    International Nuclear Information System (INIS)

    Li Min

    2000-01-01

    The author introduced a micro-controller-based CTS communication interface in nuclear logging, which provided convenience for the overhaul and regulation of the logging tool in CTS communication system. The use of micro-controller simplified the hardware structure of the interface, made the soft structure more rational and the whole system more flexible to control

  13. 21 CFR 211.182 - Equipment cleaning and use log.

    Science.gov (United States)

    2010-04-01

    ... 21 Food and Drugs 4 2010-04-01 2010-04-01 false Equipment cleaning and use log. 211.182 Section 211.182 Food and Drugs FOOD AND DRUG ADMINISTRATION, DEPARTMENT OF HEALTH AND HUMAN SERVICES... Reports § 211.182 Equipment cleaning and use log. A written record of major equipment cleaning...

  14. Logging residues under different stand and harvesting conditions, Rocky Mountains

    Science.gov (United States)

    Robert E. Benson; Cameron M. Johnston

    1976-01-01

    Volume and characteristics of logging residues from 34 harvest areas are presented. Clearcuts and partial cuts logged to conventional utilization levels and to close utilization levels are included. Residue volumes ranged from almost 3, 600 ft3 /acre of wood 3-inches-plus down to about 550 ft3 /acre, depending on treatment. More than 60 percent of the residues were...

  15. Fates of trees damaged by logging in Amazonian Bolivia

    NARCIS (Netherlands)

    Shenkin, A.; Bolker, B.; Peña Claros, M.; Licona, J.C.; Putz, F.E.

    2015-01-01

    Estimation of carbon losses from trees felled and incidentally-killed during selective logging of tropical forests is relatively straightforward and well-documented, but less is known about the fates of collaterally-damaged trees that initially survive. Tree response to logging damage is an

  16. Protein Folding Free Energy Landscape along the Committor - the Optimal Folding Coordinate.

    Science.gov (United States)

    Krivov, Sergei V

    2018-06-06

    Recent advances in simulation and experiment have led to dramatic increases in the quantity and complexity of produced data, which makes the development of automated analysis tools very important. A powerful approach to analyze dynamics contained in such data sets is to describe/approximate it by diffusion on a free energy landscape - free energy as a function of reaction coordinates (RC). For the description to be quantitatively accurate, RCs should be chosen in an optimal way. Recent theoretical results show that such an optimal RC exists; however, determining it for practical systems is a very difficult unsolved problem. Here we describe a solution to this problem. We describe an adaptive nonparametric approach to accurately determine the optimal RC (the committor) for an equilibrium trajectory of a realistic system. In contrast to alternative approaches, which require a functional form with many parameters to approximate an RC and thus extensive expertise with the system, the suggested approach is nonparametric and can approximate any RC with high accuracy without system specific information. To avoid overfitting for a realistically sampled system, the approach performs RC optimization in an adaptive manner by focusing optimization on less optimized spatiotemporal regions of the RC. The power of the approach is illustrated on a long equilibrium atomistic folding simulation of HP35 protein. We have determined the optimal folding RC - the committor, which was confirmed by passing a stringent committor validation test. It allowed us to determine a first quantitatively accurate protein folding free energy landscape. We have confirmed the recent theoretical results that diffusion on such a free energy profile can be used to compute exactly the equilibrium flux, the mean first passage times, and the mean transition path times between any two points on the profile. We have shown that the mean squared displacement along the optimal RC grows linear with time as for

  17. Search for greater stability in nuclear regulation

    International Nuclear Information System (INIS)

    Asselstine, J.K.

    1985-01-01

    The need for greater stability in nuclear regulation is discussed. Two possible approaches for dealing with the problems of new and rapidly changing regulatory requirements are discussed. The first approach relies on the more traditional licensing reform initiatives that have been considered off and on for the past decade. The second approach considers a new regulator philosophy aimed at the root causes of the proliferation of new safety requirements that have been imposed in recent years. For the past few years, the concepts of deregulation and regulatory reform have been in fashion in Washington, and the commercial nuclear power program has not remained unaffected. Many look to these concepts to provide greater stability in the regulatory program. The NRC, the nuclear industry and the administration have all been avidly pursuing regulatory reform initiatives, which take the form of both legislative and administrative proposals. Many of these proposals look to the future, and, if adopted, would have little impact on currently operating nuclear power plants or plants now under construction

  18. Greater Sudbury fuel efficient driving handbook

    Energy Technology Data Exchange (ETDEWEB)

    NONE

    2009-12-15

    Reducing the amount of fuel that people use for personal driving saves money, improves local air quality, and reduces personal contributions to climate change. This handbook was developed to be used as a tool for a fuel efficient driving pilot program in Greater Sudbury in 2009-2010. Specifically, the purpose of the handbook was to provide greater Sudbury drivers with information on how to drive and maintain their personal vehicles in order to maximize fuel efficiency. The handbook also provides tips for purchasing fuel efficient vehicles. It outlines the benefits of fuel maximization, with particular reference to reducing contributions to climate change; reducing emissions of air pollutants; safe driving; and money savings. Some tips for efficient driving are to avoid aggressive driving; use cruise control; plan trips; and remove excess weight. Tips for efficient winter driving are to avoid idling to warm up the engine; use a block heater; remove snow and ice; use snow tires; and check tire pressure. The importance of car maintenance and tire pressure was emphasized. The handbook also explains how fuel consumption ratings are developed by vehicle manufacturers. refs., figs.

  19. Women at greater risk of HIV infection.

    Science.gov (United States)

    Mahathir, M

    1997-04-01

    Although many people believe that mainly men get infected with HIV/AIDS, women are actually getting infected at a faster rate than men, especially in developing countries, and suffer more from the adverse impact of AIDS. As of mid-1996, the Joint UN Program on AIDS estimated that more than 10 million of the 25 million adults infected with HIV since the beginning of the epidemic are women. The proportion of HIV-positive women is growing, with almost half of the 7500 new infections daily occurring among women. 90% of HIV-positive women live in a developing country. In Asia-Pacific, 1.4 million women have been infected with HIV out of an estimated total 3.08 million adults from the late 1970s until late 1994. Biologically, women are more vulnerable than men to infection because of the greater mucus area exposed to HIV during penile penetration. Women under age 17 years are at even greater risk because they have an underdeveloped cervix and low vaginal mucus production. Concurrent sexually transmitted diseases increase the risk of HIV transmission. Women's risk is also related to their exposure to gender inequalities in society. The social and economic pressures of poverty exacerbate women's risk. Prevention programs are discussed.

  20. A log-sinh transformation for data normalization and variance stabilization

    Science.gov (United States)

    Wang, Q. J.; Shrestha, D. L.; Robertson, D. E.; Pokhrel, P.

    2012-05-01

    When quantifying model prediction uncertainty, it is statistically convenient to represent model errors that are normally distributed with a constant variance. The Box-Cox transformation is the most widely used technique to normalize data and stabilize variance, but it is not without limitations. In this paper, a log-sinh transformation is derived based on a pattern of errors commonly seen in hydrological model predictions. It is suited to applications where prediction variables are positively skewed and the spread of errors is seen to first increase rapidly, then slowly, and eventually approach a constant as the prediction variable becomes greater. The log-sinh transformation is applied in two case studies, and the results are compared with one- and two-parameter Box-Cox transformations.

  1. MC simulation of the collimation effects on measurement precision of high-resolution logging

    International Nuclear Information System (INIS)

    Wu Wensheng; Xiao Lizhi

    2010-01-01

    In this paper,the MCNP code is used to calculate responses to detector counting rate and formation sensitivity in oil-well logging with different opening shapes and angles of the γ-ray source aperture and detector collimator. The results show that the opening shape and angle of the source aperture affect the measurement precision far more than the opening shape and angle of the detector collimator, and the influences are greater than that of the formation sensitivity. A logging system that is equipped with a γ-ray source having a cuniform aperture of 45 degree opening angle, and a window aperture of 0 degree opening angle for a long-spacing detector or a short-spacing detector, and 5 degree-15 degree opening angle for a middle-spacing detector, will improve the measurement precision. (authors)

  2. The log mean heat transfer rate method of heat exchanger considering the influence of heat radiation

    International Nuclear Information System (INIS)

    Wong, K.-L.; Ke, M.-T.; Ku, S.-S.

    2009-01-01

    The log mean temperature difference (LMTD) method is conventionally used to calculate the total heat transfer rate of heat exchangers. Because the heat radiation equation contains the 4th order exponential of temperature which is very complicate in calculations, thus LMTD method neglects the influence of heat radiation. From the recent investigation of a circular duct in some practical situations, it is found that even in the situation of the temperature difference between outer duct surface and surrounding is low to 1 deg. C, the heat radiation effect can not be ignored in the situations of lower ambient convective heat coefficient and greater surface emissivities. In this investigation, the log mean heat transfer rate (LMHTR) method which considering the influence of heat radiation, is developed to calculate the total heat transfer rate of heat exchangers.

  3. Design and simulation of origami structures with smooth folds.

    Science.gov (United States)

    Peraza Hernandez, E A; Hartl, D J; Lagoudas, D C

    2017-04-01

    Origami has enabled new approaches to the fabrication and functionality of multiple structures. Current methods for origami design are restricted to the idealization of folds as creases of zeroth-order geometric continuity. Such an idealization is not proper for origami structures of non-negligible fold thickness or maximum curvature at the folds restricted by material limitations. For such structures, folds are not properly represented as creases but rather as bent regions of higher-order geometric continuity. Such fold regions of arbitrary order of continuity are termed as smooth folds . This paper presents a method for solving the following origami design problem: given a goal shape represented as a polygonal mesh (termed as the goal mesh ), find the geometry of a single planar sheet, its pattern of smooth folds, and the history of folding motion allowing the sheet to approximate the goal mesh. The parametrization of the planar sheet and the constraints that allow for a valid pattern of smooth folds are presented. The method is tested against various goal meshes having diverse geometries. The results show that every determined sheet approximates its corresponding goal mesh in a known folded configuration having fold angles obtained from the geometry of the goal mesh.

  4. Single-Chain Folding of Synthetic Polymers: A Critical Update.

    Science.gov (United States)

    Altintas, Ozcan; Barner-Kowollik, Christopher

    2015-11-23

    The current contribution serves as a critical update to a previous feature article from us (Macromol. Rapid Commun. 2012, 33, 958-971), and highlights the latest advances in the preparation of single chain polymeric nanoparticles and initial-yet promising-attempts towards mimicking the structure of natural biomacromolecules via single-chain folding of well-defined linear polymers via so-called single chain selective point folding and repeat unit folding. The contribution covers selected examples from the literature published up to ca. September 2015. Our aim is not to provide an exhaustive review but rather highlight a selection of new and exciting examples for single-chain folding based on advanced macromolecular precision chemistry. Initially, the discussion focuses on the synthesis and characterization of single-chain folded structures via selective point folding. The second part of the feature article addresses the folding of well-defined single-chain polymers by means of repeat unit folding. The current state of the art in the field of single-chain folding indicates that repeat unit folding-driven nanoparticle preparation is well-advanced, while initial encouraging steps towards building selective point folding systems have been taken. In addition, a summary of the-in our view-open key questions is provided that may guide future biomimetic design efforts. © 2015 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

  5. Inversion of a lateral log using neural networks

    International Nuclear Information System (INIS)

    Garcia, G.; Whitman, W.W.

    1992-01-01

    In this paper a technique using neural networks is demonstrated for the inversion of a lateral log. The lateral log is simulated by a finite difference method which in turn is used as an input to a backpropagation neural network. An initial guess earth model is generated from the neural network, which is then input to a Marquardt inversion. The neural network reacts to gross and subtle data features in actual logs and produces a response inferred from the knowledge stored in the network during a training process. The neural network inversion of lateral logs is tested on synthetic and field data. Tests using field data resulted in a final earth model whose simulated lateral is in good agreement with the actual log data

  6. Cased-hole log analysis and reservoir performance monitoring

    CERN Document Server

    Bateman, Richard M

    2015-01-01

    This book addresses vital issues, such as the evaluation of shale gas reservoirs and their production. Topics include the cased-hole logging environment, reservoir fluid properties; flow regimes; temperature, noise, cement bond, and pulsed neutron logging; and casing inspection. Production logging charts and tables are included in the appendices. The work serves as a comprehensive reference for production engineers with upstream E&P companies, well logging service company employees, university students, and petroleum industry training professionals. This book also: ·       Provides methods of conveying production logging tools along horizontal well segments as well as measurements of formation electrical resistivity through casing ·       Covers new information on fluid flow characteristics in inclined pipe and provides new and improved nuclear tool measurements in cased wells ·       Includes updates on cased-hole wireline formation testing  

  7. Toward an Automated Labeling of Event Log Attributes

    DEFF Research Database (Denmark)

    Abbad Andaloussi, Amine; Burattin, Andrea; Weber, Barbara

    2018-01-01

    information systems often do not comply with the required maturity level, since they lack the notion of process instance, also referred in process mining as “case id”. Without a proper identification of the case id attribute in log files, the outcome of process mining algorithms is unpredictable. This paper...... proposes a new approach that aims to overcome this challenge by automatically inferring the case id attribute from log files. The approach has been implemented as a ProM plugin and evaluated with several real-world event logs. The results demonstrate a high accuracy in inferring the case id attribute.......Process mining aims at exploring the data produced by executable business processes to mine the underlying control-flow and dataflow. Most of the process mining algorithms assume the existence of an event log with a certain maturity level. Unfortunately, the logs provided by process unaware...

  8. Rock mass characterization for Copenhagen Metro using face logs

    DEFF Research Database (Denmark)

    Hansen, Sanne Louise; Galsgaard, Jens; Foged, Niels Nielsen

    2015-01-01

    An extension of the existing Metro in central Copenhagen is currently under construction. We present a comparison of the different field logging techniques available from a large number of borehole logs and face logs carried out during the construction in cooperation with the constructor and client......, describing rock mass characteristics using detailed face logging with geological description and recording of induration and fracturing, giving a field RQD value during excavation, combined with televiewer logs, when available, has shown to be a valuable tool for rock mass characterization compared......’s representatives, which illustrate and approve the applied methods. The new ‘Cityringen’ Metro will consist of two 16 km single track tunnels, with 17 stations and 3 construction and ventilation shafts. The geological ground conditions are dominated by glacial and postglacial deposits overlying Paleocene Greensand...

  9. Quantification of Drive-Response Relationships Between Residues During Protein Folding.

    Science.gov (United States)

    Qi, Yifei; Im, Wonpil

    2013-08-13

    Mutual correlation and cooperativity are commonly used to describe residue-residue interactions in protein folding/function. However, these metrics do not provide any information on the causality relationships between residues. Such drive-response relationships are poorly studied in protein folding/function and difficult to measure experimentally due to technical limitations. In this study, using the information theory transfer entropy (TE) that provides a direct measurement of causality between two times series, we have quantified the drive-response relationships between residues in the folding/unfolding processes of four small proteins generated by molecular dynamics simulations. Instead of using a time-averaged single TE value, the time-dependent TE is measured with the Q-scores based on residue-residue contacts and with the statistical significance analysis along the folding/unfolding processes. The TE analysis is able to identify the driving and responding residues that are different from the highly correlated residues revealed by the mutual information analysis. In general, the driving residues have more regular secondary structures, are more buried, and show greater effects on the protein stability as well as folding and unfolding rates. In addition, the dominant driving and responding residues from the TE analysis on the whole trajectory agree with those on a single folding event, demonstrating that the drive-response relationships are preserved in the non-equilibrium process. Our study provides detailed insights into the protein folding process and has potential applications in protein engineering and interpretation of time-dependent residue-based experimental observables for protein function.

  10. A new chlorine logging tool: Application in the oilfield development with high salinity formation water

    International Nuclear Information System (INIS)

    Qing-Yuan, He; Xin-Miao, Hu; Geng-Fei, Wu; Wen-DA, J.

    1997-01-01

    Radiating formations with isotopes neutron source (Am-Be), and using chlorine element contained in the formation water as a tracer indicator, the chlorine spectrum well logging tool has been regarded as the important and useful tool in the determination of water flooding intensity of formation intervals, especially in the oilfield development stages with high salinity formation water. However, the accuracy of determination of the oil/water-bearings needs to be improved. A new chlorine spectrum logging tool with two detectors has been developed. The short (near) detector uses a He-3 counter tube to measure formation epithermal neutron intensity, the long (far) detector uses a BGO crystal detector to replace traditional Nal detector for measuring the captured X gamma ray spectrum produced by the thermal neutron capture process in the formation. Although the energy resolution of BGO detector to gamma rays is less effective than that of Nal detector, the efficiency of BGO detector to high energy gamma rays is much better. This advantage helps to detect captured chlorine gamma rays, which increases the ability of chlorine element detection. The effect of statistical errors is also reduced. The spectrum autostabilization function in the downhole tool improves the reliability of the whole system. The new chlorine spectrum logging tool can give three log curves simultaneously, these curves are formation porosity, chlorine content, and the ratio of chlorine content and thermal neutron intensity. When formation porosity is larger than 10 p.u, formation water salinity is greater than 40,000 ppm, the resolution to the oil/water-bearings is increased to about 10% compared with the old version tool. Field tests show that the accuracy of water flooding intensity evaluation has been upgraded considerably with the use of new chlorine spectrum logging tool, which contributes greatly to the oilfield development with high salinity formation water

  11. A new chlorine logging tool: Application in the oilfield development with high salinity formation water

    Energy Technology Data Exchange (ETDEWEB)

    Qing-Yuan, He; Xin-Miao, Hu; Geng-Fei, Wu [China National Petroleum Corp. (China). Jianghan Well Logging Institute; Wen-DA, J. [China National Petroleum Corp. (China). Development Bureau

    1997-10-01

    Radiating formations with isotopes neutron source (Am-Be), and using chlorine element contained in the formation water as a tracer indicator, the chlorine spectrum well logging tool has been regarded as the important and useful tool in the determination of water flooding intensity of formation intervals, especially in the oilfield development stages with high salinity formation water. However, the accuracy of determination of the oil/water-bearings needs to be improved. A new chlorine spectrum logging tool with two detectors has been developed. The short (near) detector uses a He-3 counter tube to measure formation epithermal neutron intensity, the long (far) detector uses a BGO crystal detector to replace traditional Nal detector for measuring the captured X gamma ray spectrum produced by the thermal neutron capture process in the formation. Although the energy resolution of BGO detector to gamma rays is less effective than that of Nal detector, the efficiency of BGO detector to high energy gamma rays is much better. This advantage helps to detect captured chlorine gamma rays, which increases the ability of chlorine element detection. The effect of statistical errors is also reduced. The spectrum autostabilization function in the downhole tool improves the reliability of the whole system. The new chlorine spectrum logging tool can give three log curves simultaneously, these curves are formation porosity, chlorine content, and the ratio of chlorine content and thermal neutron intensity. When formation porosity is larger than 10 p.u, formation water salinity is greater than 40,000 ppm, the resolution to the oil/water-bearings is increased to about 10% compared with the old version tool. Field tests show that the accuracy of water flooding intensity evaluation has been upgraded considerably with the use of new chlorine spectrum logging tool, which contributes greatly to the oilfield development with high salinity formation water 4 refs., 2 tabs., 7 figs.

  12. Physiological and morphological responses of pine and willow saplings to post-fire salvage logging

    Science.gov (United States)

    Millions, E. L.; Letts, M. G.; Harvey, T.; Rood, S. B.

    2015-12-01

    With global warming, forest fires may be increasing in frequency, and post-fire salvage logging may become more common. The ecophysiological impacts of this practice on tree saplings remain poorly understood. In this study, we examined the physiological and morphological impacts of increased light intensity, due to post-fire salvage logging, on the conifer Pinus contorta (pine) and deciduous broadleaf Salix lucida (willow) tree and shrub species in the Crowsnest Pass region of southern Alberta. Photosynthetic gas-exchange and plant morphological measurements were taken throughout the summer of 2013 on approximately ten year-old saplings of both species. Neither species exhibited photoinhibition, but different strategies were observed to acclimate to increased light availability. Willow saplings were able to slightly elevate their light-saturated rate of net photosynthesis (Amax) when exposed to higher photosynthetic photon flux density (PPFD), thus increasing their growth rate. Willow also exhibited increased leaf inclination angles and leaf mass per unit area (LMA), to decrease light interception in the salvage-logged plot. By contrast, pine, which exhibited lower Amax and transpiration (E), but higher water-use efficiency (WUE = Amax/E) than willow, increased the rate at which electrons were moved through and away from the photosynthetic apparatus in order to avoid photoinhibition. Acclimation indices were higher in willow saplings, consistent with the hypothesis that species with short-lived foliage exhibit greater acclimation. LMA was higher in pine saplings growing in the logged plot, but whole-plant and branch-level morphological acclimation was limited and more consistent with a response to decreased competition in the logged plot, which had much lower stand density.

  13. The impact of post-fire salvage logging on microbial nitrogen cyclers in Mediterranean forest soil.

    Science.gov (United States)

    Pereg, Lily; Mataix-Solera, Jorge; McMillan, Mary; García-Orenes, Fuensanta

    2018-04-01

    Forest fires are a regular occurrence in the Mediterranean basin. High severity fires and post-fire management can affect biological, chemical and physical properties of soil, including the composition and abundance of soil microbial communities. Salvage logging is a post-fire management strategy, which involves the removal of burnt wood from land after a fire. The main objective of this work was to evaluate the impact of post-fire salvage logging and microaggregation on soil microbial communities, specifically on the abundance of nitrogen cyclers and, thus, the potential of the soil for microbial nitrogen cycling. The abundance of nitrogen cyclers was assessed by quantification of microbial nitrogen cycling genes in soil DNA, including nifH (involved in nitrogen fixation), nirS/K and nosZ (involved in denitrification), amoA-B and amoA-Arch (involved in bacterial and archaeal nitrification, respectively). It was demonstrated that salvage logging reduced bacterial load post-fire when compared to tree retention control and resulted in significant changes to the abundance of functional bacteria involved in nitrogen cycling. Microbial gene pools involved in various stages of the nitrogen cycle were larger in control soil than in soil subjected to post-fire salvage logging and were significantly correlated with organic matter, available phosphorous, nitrogen and aggregate stability. The microaggregate fraction of the soil, which has been associated with greater organic carbon, was shown to be a hotspot for nitrogen cyclers particularly under salvage logging. The impact of post-fire management strategies on soil microbial communities needs to be considered in relation to maintaining ecosystem productivity, resilience and potential impact on climate change. Copyright © 2017 Elsevier B.V. All rights reserved.

  14. Automated recognition of stratigraphic marker shales from geophysical logs in iron ore deposits

    Science.gov (United States)

    Silversides, Katherine; Melkumyan, Arman; Wyman, Derek; Hatherly, Peter

    2015-04-01

    The mining of stratiform ore deposits requires a means of determining the location of stratigraphic boundaries. A variety of geophysical logs may provide the required data but, in the case of banded iron formation hosted iron ore deposits in the Hamersley Ranges of Western Australia, only one geophysical log type (natural gamma) is collected for this purpose. The information from these logs is currently processed by slow manual interpretation. In this paper we present an alternative method of automatically identifying recurring stratigraphic markers in natural gamma logs from multiple drill holes. Our approach is demonstrated using natural gamma geophysical logs that contain features corresponding to the presence of stratigraphically important marker shales. The host stratigraphic sequence is highly consistent throughout the Hamersley and the marker shales can therefore be used to identify the stratigraphic location of the banded iron formation (BIF) or BIF hosted ore. The marker shales are identified using Gaussian Processes (GP) trained by either manual or active learning methods and the results are compared to the existing geological interpretation. The manual method involves the user selecting the signatures for improving the library, whereas the active learning method uses the measure of uncertainty provided by the GP to select specific examples for the user to consider for addition. The results demonstrate that both GP methods can identify a feature, but the active learning approach has several benefits over the manual method. These benefits include greater accuracy in the identified signatures, faster library building, and an objective approach for selecting signatures that includes the full range of signatures across a deposit in the library. When using the active learning method, it was found that the current manual interpretation could be replaced in 78.4% of the holes with an accuracy of 95.7%.

  15. Log-concavity property for some well-known distributions

    Directory of Open Access Journals (Sweden)

    G. R. Mohtashami Borzadaran

    2011-12-01

    Full Text Available Interesting properties and propositions, in many branches of science such as economics have been obtained according to the property of cumulative distribution function of a random variable as a concave function. Caplin and Nalebuff (1988,1989, Bagnoli and Khanna (1989 and Bagnoli and Bergstrom (1989 , 1989, 2005 have discussed the log-concavity property of probability distributions and their applications, especially in economics. Log-concavity concerns twice differentiable real-valued function g whose domain is an interval on extended real line. g as a function is said to be log-concave on the interval (a,b if the function ln(g is a concave function on (a,b. Log-concavity of g on (a,b is equivalent to g'/g being monotone decreasing on (a,b or (ln(g" 6] have obtained log-concavity for distributions such as normal, logistic, extreme-value, exponential, Laplace, Weibull, power function, uniform, gamma, beta, Pareto, log-normal, Student's t, Cauchy and F distributions. We have discussed and introduced the continuous versions of the Pearson family, also found the log-concavity for this family in general cases, and then obtained the log-concavity property for each distribution that is a member of Pearson family. For the Burr family these cases have been calculated, even for each distribution that belongs to Burr family. Also, log-concavity results for distributions such as generalized gamma distributions, Feller-Pareto distributions, generalized Inverse Gaussian distributions and generalized Log-normal distributions have been obtained.

  16. Influence of borehole-eccentred tools on wireline and logging-while-drilling sonic logging measurements

    KAUST Repository

    Pardo, David

    2013-02-13

    We describe a numerical study to quantify the influence of tool-eccentricity on wireline (WL) and logging-while-drilling (LWD) sonic logging measurements. Simulations are performed with a height-polynomial-adaptive (hp) Fourier finite-element method that delivers highly accurate solutions of linear visco-elasto-acoustic problems in the frequency domain. The analysis focuses on WL instruments equipped with monopole or dipole sources and LWD instruments with monopole excitation. Analysis of the main propagation modes obtained from frequency dispersion curves indicates that the additional high-order modes arising as a result of borehole-eccentricity interfere with the main modes (i.e., Stoneley, pseudo-Rayleigh and flexural). This often modifies (decreases) the estimation of shear and compressional formation velocities, which should be corrected (increased) to account for borehole-eccentricity effects. Undesired interferences between different modes can occur at different frequencies depending upon the properties of the formation and fluid annulus size, which may difficult the estimation of the formation velocities. © 2013 European Association of Geoscientists & Engineers.

  17. Lithologic log and interpretation of instrument logs NURE project, Carson Sink, Nevada, borehole

    International Nuclear Information System (INIS)

    Horton, R.C.

    1978-04-01

    No uranium mineralization was penetrated by the drilling. The uranium content of the rock units are within the usual range for unmineralized rocks of the types penetrated. Although the instrument logs indicated ample porosity in the sedimentary section, drill-stem tests in the intervals 699 to 722 ft, 3,692 to 3,734 ft, and 3,920 to 3,995 ft failed to recover any formation fluid. The instrument logs generally indicated low porosity and permeability in the volcanic rocks. The low permeability may have prohibited the circulation of ground water and possible supergene enrichment. The Carson Sink is a closed basin and all water is lost by evaporation, although there may be minor subsurface interbasin transfer. As the basin subsided dense connate water (brines) may have been trapped within the sediments making circulation of less dense water impossible. At present, nonsaline water is found only at shallow depths and is underlain by saline water. The hydrologic regime of the basin is complex and general assumptions should be made with care. Detailed analysis of hydrologic data may reveal zones of deep circulation. Reducing conditions, as evidenced by thin beds of organic rich material and pyrite, are present at depth. However, the unconsolidated sediments are young (Pleistocene to Recent) and perhaps too youthful for substantial mineralization to have occurred. No further deep drilling is recommended until the complex prehistoric hydrologic regime is studied. The study should include the geologic structural history of the basin and influence of Pleistocene and earlier pluvial cycles

  18. Small cities face greater impact from automation.

    Science.gov (United States)

    Frank, Morgan R; Sun, Lijun; Cebrian, Manuel; Youn, Hyejin; Rahwan, Iyad

    2018-02-01

    The city has proved to be the most successful form of human agglomeration and provides wide employment opportunities for its dwellers. As advances in robotics and artificial intelligence revive concerns about the impact of automation on jobs, a question looms: how will automation affect employment in cities? Here, we provide a comparative picture of the impact of automation across US urban areas. Small cities will undertake greater adjustments, such as worker displacement and job content substitutions. We demonstrate that large cities exhibit increased occupational and skill specialization due to increased abundance of managerial and technical professions. These occupations are not easily automatable, and, thus, reduce the potential impact of automation in large cities. Our results pass several robustness checks including potential errors in the estimation of occupational automation and subsampling of occupations. Our study provides the first empirical law connecting two societal forces: urban agglomeration and automation's impact on employment. © 2018 The Authors.

  19. Small cities face greater impact from automation

    Science.gov (United States)

    Sun, Lijun; Cebrian, Manuel; Rahwan, Iyad

    2018-01-01

    The city has proved to be the most successful form of human agglomeration and provides wide employment opportunities for its dwellers. As advances in robotics and artificial intelligence revive concerns about the impact of automation on jobs, a question looms: how will automation affect employment in cities? Here, we provide a comparative picture of the impact of automation across US urban areas. Small cities will undertake greater adjustments, such as worker displacement and job content substitutions. We demonstrate that large cities exhibit increased occupational and skill specialization due to increased abundance of managerial and technical professions. These occupations are not easily automatable, and, thus, reduce the potential impact of automation in large cities. Our results pass several robustness checks including potential errors in the estimation of occupational automation and subsampling of occupations. Our study provides the first empirical law connecting two societal forces: urban agglomeration and automation's impact on employment. PMID:29436514

  20. Planning for greater-confinement disposal

    International Nuclear Information System (INIS)

    Gilbert, T.L.; Luner, C.; Meshkov, N.K.; Trevorrow, L.E.; Yu, C.

    1984-01-01

    This contribution is a progress report for preparation of a document that will summarize procedures and technical information needed to plan for and implement greater-confinement disposal (GCD) of low-level radioactive waste. Selection of a site and a facility design (Phase I), and construction, operation, and extended care (Phase II) will be covered in the document. This progress report is limited to Phase I. Phase I includes determination of the need for GCD, design alternatives, and selection of a site and facility design. Alternative designs considered are augered shafts, deep trenches, engineered structures, high-integrity containers, hydrofracture, and improved waste form. Design considerations and specifications, performance elements, cost elements, and comparative advantages and disadvantages of the different designs are covered. Procedures are discussed for establishing overall performance objectives and waste-acceptance criteria, and for comparative assessment of the performance and cost of the different alternatives. 16 references