Antifoulant (butyltin and copper) concentrations in sediments from the Great Barrier Reef World Heritage Area, Australia

International Nuclear Information System (INIS)

Haynes, David; Loong, Dominica

2002-01-01

Antifoulant concentrations are generally low in the Great Barrier Reef, although ship grounding sites present a previously unidentified significant source of antifoulant pollutants in the Great Barrier Reef. - Antifoulant concentrations were determined in marine sediments collected from commercial harbours, marinas, mooring locations on mid-shelf continental islands, and outer reef sites in four regions within the Great Barrier Reef World Heritage Area in 1999. Highest copper concentrations were present in sediments collected from commercial harbour sampling sites (28-233 μg Cu g -1 dry wt.). In contrast, copper concentrations in sediments collected from boat mooring sites on mid-shelf continental islands and outer reef sites were at background concentrations (i.e. -1 dry wt.). Butyltin was only detectable in four of the 42 sediments sampled for analysis, and was only present in sediments collected from commercial harbours (18-1275 ng Sn g -1 dry wt.) and from marinas (4-5 ng Sn g -1 dry wt.). The detection of tributyltin at marina sites implies that this antifoulant may continue to be used illegally on the hulls of smaller recreational vessels. Sediment samples were also collected opportunistically from the site of a 22,000 t cargo ship grounding in May 1999 at Heath Reef, in the far northern Great Barrier Reef. Butyltin concentrations were grossly elevated (660-340,000 ng Sn g -1 dry wt.) at the grounding site. The impact of residual antifoulants at large ship grounding sites should be recognised as a significant, long-term environmental problem unless antfoulant clean-up strategies are undertaken

Integrating observational and modelling systems for the management of the Great Barrier Reef

Science.gov (United States)

Baird, M. E.; Jones, E. M.; Margvelashvili, N.; Mongin, M.; Rizwi, F.; Robson, B.; Schroeder, T.; Skerratt, J.; Steven, A. D.; Wild-Allen, K.

2016-02-01

Observational and modelling systems provide two sources of knowledge that must be combined to provide a more complete view than either observations or models alone can provide. Here we describe the eReefs coupled hydrodynamic, sediment and biogeochemical model that has been developed for the Great Barrier Reef; and the multiple observations that are used to constrain the model. Two contrasting examples of model - observational integration are highlighted. First we explore the carbon chemistry of the waters above the reef, for which observations are accurate, but expensive and therefore sparse, while model behaviour is highly skilful. For carbon chemistry, observations are used to constrain model parameterisation and quantify model error, with the model output itself providing the most useable knowledge for management purposes. In contrast, ocean colour provides inaccurate, but cheap and spatially and temporally extensive observations. Thus observations are best combined with the model in a data assimilating framework, where a custom-designed optical model has been developed for the purposes of incorporating ocean colour observations. The future management of Great Barrier Reef water quality will be based on an integration of observing and modelling systems, providing the most robust information available.

The distribution and abundance of reef-associated predatory fishes on the Great Barrier Reef

Science.gov (United States)

Emslie, Michael J.; Cheal, Alistair J.; Logan, Murray

2017-09-01

Predatory fishes are important components of coral-reef ecosystems of the Great Barrier Reef (GBR) through both the ecological functions they perform and their high value to recreational and commercial fisheries, estimated at 30 million in 2014. However, management of GBR predatory fish populations is hampered by a lack of knowledge of their distribution and abundance, aside from that of the highly targeted coral trout ( Plectropomus spp. and Variola spp.). Furthermore, there is little information on how these fishes respond to environmental stressors such as coral bleaching, outbreaks of coral-feeding starfishes ( Acanthaster planci) and storms, which limits adaptive management of their populations as the frequency or severity of such natural disturbances increases under climate change. Here, we document the distribution and abundance of 48 species of reef-associated predatory fishes and assess their vulnerability to a range of natural disturbances. There were clear differences in predatory fish assemblages across the continental shelf, but many species were widespread, with few species restricted to either inshore or offshore waters. There was weak latitudinal structure with only a few species restricted to either the northern or southern GBR. On the whole, predatory fishes were surprisingly resistant to the effects of disturbance, with few clear changes in abundance or species richness following 66 documented disturbances of varying magnitudes.

The evolution of the Great Barrier Reef during the Last Interglacial Period

Science.gov (United States)

Dechnik, Belinda; Webster, Jody M.; Webb, Gregory E.; Nothdurft, Luke; Dutton, Andrea; Braga, Juan-Carlos; Zhao, Jian-xin; Duce, Stephanie; Sadler, James

2017-02-01

Reef response to Last Interglacial (LIG) sea level and palaeoenvironmental change has been well documented at a limited number of far-field sites remote from former ice sheets. However, the age and development of LIG reefs in the Great Barrier Reef (GBR) remain poorly understood due to their location beneath modern living reefs. Here we report thirty-nine new mass spectrometry U-Th ages from seven LIG platform reefs across the northern, central and southern GBR. Two distinct geochemical populations of corals were observed, displaying activity ratios consistent with either closed or open system evolution. Our closed-system ages ( 129-126 ka) provide the first reliable LIG ages for the entire GBR. Combined with our open-system model ages, we are able to constrain the interval of significant LIG reef growth in the southern GBR to between 129-121 ka. Using age-elevation data in conjunction with newly defined coralgal assemblages and sedimentary facies analysis we have defined three distinct phases of LIG reef development in response to major sea level and oceanographic changes. These phases include: Phase 1 (> 129 ka), a shallow-water coralgal colonisation phase following initial flooding of the older, likely Marine Isotope Stage 7 (MIS7) antecedent platform; Phase 2 ( 129 ka), a near drowning event in response to rapid sea level rise and greater nutrient-rich upwelling and; Phase 3 ( 128-121 ka), establishment of significant reef framework through catch-up reef growth, initially characterised by deeper, more turbid coralgal assemblages (Phase 3a) that transition to shallow-water assemblages following sea level stabilisation (Phase 3b). Coralgal assemblage analysis indicates that the palaeoenvironments during initial reef growth phases (1 and 2) of the LIG were significantly different than the initial reef growth phases in the Holocene. However, the similar composition of ultimate shallow-water coralgal assemblages and slow reef accretion rates following stabilisation

Large-scale, multidirectional larval connectivity among coral reef fish populations in the Great Barrier Reef Marine Park

KAUST Repository

Williamson, David H.; Harrison, Hugo B.; Almany, Glenn R.; Berumen, Michael L.; Bode, Michael; Bonin, Mary C.; Choukroun, Severine; Doherty, Peter J.; Frisch, Ashley J.; Saenz-Agudelo, Pablo; Jones, Geoffrey P.

2016-01-01

Larval dispersal is the key process by which populations of most marine fishes and invertebrates are connected and replenished. Advances in larval tagging and genetics have enhanced our capacity to track larval dispersal, assess scales of population connectivity, and quantify larval exchange among no-take marine reserves and fished areas. Recent studies have found that reserves can be a significant source of recruits for populations up to 40 km away, but the scale and direction of larval connectivity across larger seascapes remain unknown. Here, we apply genetic parentage analysis to investigate larval dispersal patterns for two exploited coral reef groupers (Plectropomus maculatus and Plectropomus leopardus) within and among three clusters of reefs separated by 60–220 km within the Great Barrier Reef Marine Park, Australia. A total of 69 juvenile P. maculatus and 17 juvenile P. leopardus (representing 6% and 9% of the total juveniles sampled, respectively) were genetically assigned to parent individuals on reefs within the study area. We identified both short-distance larval dispersal within regions (200 m to 50 km) and long-distance, multidirectional dispersal of up to ~250 km among regions. Dispersal strength declined significantly with distance, with best-fit dispersal kernels estimating median dispersal distances of ~110 km for P. maculatus and ~190 km for P. leopardus. Larval exchange among reefs demonstrates that established reserves form a highly connected network and contribute larvae for the replenishment of fished reefs at multiple spatial scales. Our findings highlight the potential for long-distance dispersal in an important group of reef fishes, and provide further evidence that effectively protected reserves can yield recruitment and sustainability benefits for exploited fish populations.

Large-scale, multidirectional larval connectivity among coral reef fish populations in the Great Barrier Reef Marine Park

KAUST Repository

Williamson, David H.

2016-11-15

Larval dispersal is the key process by which populations of most marine fishes and invertebrates are connected and replenished. Advances in larval tagging and genetics have enhanced our capacity to track larval dispersal, assess scales of population connectivity, and quantify larval exchange among no-take marine reserves and fished areas. Recent studies have found that reserves can be a significant source of recruits for populations up to 40 km away, but the scale and direction of larval connectivity across larger seascapes remain unknown. Here, we apply genetic parentage analysis to investigate larval dispersal patterns for two exploited coral reef groupers (Plectropomus maculatus and Plectropomus leopardus) within and among three clusters of reefs separated by 60–220 km within the Great Barrier Reef Marine Park, Australia. A total of 69 juvenile P. maculatus and 17 juvenile P. leopardus (representing 6% and 9% of the total juveniles sampled, respectively) were genetically assigned to parent individuals on reefs within the study area. We identified both short-distance larval dispersal within regions (200 m to 50 km) and long-distance, multidirectional dispersal of up to ~250 km among regions. Dispersal strength declined significantly with distance, with best-fit dispersal kernels estimating median dispersal distances of ~110 km for P. maculatus and ~190 km for P. leopardus. Larval exchange among reefs demonstrates that established reserves form a highly connected network and contribute larvae for the replenishment of fished reefs at multiple spatial scales. Our findings highlight the potential for long-distance dispersal in an important group of reef fishes, and provide further evidence that effectively protected reserves can yield recruitment and sustainability benefits for exploited fish populations.

Prey Density Threshold and Tidal Influence on Reef Manta Ray Foraging at an Aggregation Site on the Great Barrier Reef.

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Asia O Armstrong

Full Text Available Large tropical and sub-tropical marine animals must meet their energetic requirements in a largely oligotrophic environment. Many planktivorous elasmobranchs, whose thermal ecologies prevent foraging in nutrient-rich polar waters, aggregate seasonally at predictable locations throughout tropical oceans where they are observed feeding. Here we investigate the foraging and oceanographic environment around Lady Elliot Island, a known aggregation site for reef manta rays Manta alfredi in the southern Great Barrier Reef. The foraging behaviour of reef manta rays was analysed in relation to zooplankton populations and local oceanography, and compared to long-term sighting records of reef manta rays from the dive operator on the island. Reef manta rays fed at Lady Elliot Island when zooplankton biomass and abundance were significantly higher than other times. The critical prey density threshold that triggered feeding was 11.2 mg m-3 while zooplankton size had no significant effect on feeding. The community composition and size structure of the zooplankton was similar when reef manta rays were feeding or not, with only the density of zooplankton changing. Higher zooplankton biomass was observed prior to low tide, and long-term (~5 years sighting data confirmed that more reef manta rays are also observed feeding during this tidal phase than other times. This is the first study to examine prey availability at an aggregation site for reef manta rays and it indicates that they feed in locations and at times of higher zooplankton biomass.

Perspectives on the Great Amazon Reef: Extension, Biodiversity, and Threats

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Ronaldo B. Francini-Filho

2018-04-01

Full Text Available Here we provide a broad overview of the Great Amazon Reef System (GARS based on the first-ever video surveys of the region. This footage supports four major hypotheses: (1 the GARS area may be six times larger than previously suggested (up to 56,000 km2; (2 the GARS may extend deeper than previously suggested (up to 220 m; (3 the GARS is composed of a greater complexity and diversity of habitats than previously recognized (e.g., reef platforms, reef walls, rhodolith beds, and sponge bottoms; and (4 the GARS represents a useful system to test whether a deep corridor connects the Caribbean Sea to the Southwest Atlantic Ocean. We also call attention to the urgent need to adopt precautionary conservation measures to protect the region in the face of increasing threats from extractive oil and gas practices. With less than 5% of the potential area of the GARS surveyed so far, more research will be required to inform a systematic conservation planning approach and determine how best to establish a network of marine protected areas. Such planning will be required to reconcile extractive activities with effective biodiversity conservation in the GARS.

Temporal and taxonomic contrasts in coral growth at Davies Reef, central Great Barrier Reef, Australia

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Anderson, Kristen D.; Cantin, Neal E.; Heron, Scott F.; Lough, Janice M.; Pratchett, Morgan S.

2018-06-01

Demographic processes, such as growth, can have an important influence on the population and community structure of reef-building corals. Importantly, ongoing changes in environmental conditions (e.g. ocean warming) are expected to affect coral growth, contributing to changes in the structure of coral populations and communities. This study quantified contemporary growth rates (linear extension and calcification) for the staghorn coral, Acropora muricata, at Davies Reef, central Great Barrier Reef, Australia. Growth rates were measured at three different depths (5, 10, and 15 m) over 2 yr (2012-2014) assessing both seasonal and inter-annual variability. Results of this study were compared to equivalent measurements made in 1980-1982 at the same location. To assist in understanding inter-annual variability in coral growth, we also examined annual growth bands from massive Porites providing continuous growth and records of flooding history for Davies Reef over the period 1979-2012. Linear extension rates of A. muricata were substantially (11-62%) lower in 2012-2014 compared to 1980-1982, especially at 10 and 15 m depths. These declines in growth coincide with a + 0.14 °C change in annual mean temperature. For massive Porites, however, calcification rates were highly variable among years and there was no discernible long-term change in growth despite sustained increases in temperature of 0.064 °C per decade. Apparent differences in the growth rates of Acropora between 1980-1982 and 2012-2014 may reflect inter-annual variation in coral growth (as seen for massive Porites), though it is known branching Acropora is much more sensitive to changing environmental conditions than massive corals. There are persistent issues in assessing the sensitivities of branching corals to environmental change due to limited capacity for retrospective analyses of growth, but given their disproportionate contribution to habitat complexity and reef structure, it is critical to ascertain

Evaluation of a New Prototype Geodetic Astrolabe for Measuring Deflections of the Vertical

Science.gov (United States)

Slater, J. A.; Thompson, N.; Angell, L. E.; Belenkii, M. S.; Bruns, D. G.; Johnson, D. O.

2009-12-01

During the last three years, the National Geospatial-Intelligence Agency (NGA), with assistance from the U.S. Naval Observatory (USNO), sponsored the development of a new electronic geodetic astrolabe for measuring deflections of the vertical (DoV). NGA’s current operational astrolabes, built in 1995, have a number of undesirable features including the need for a pool of liquid mercury as a reflecting surface. The new state-of-the-art prototype instrument, completed by Trex Enterprises in early 2009, was designed to meet a 0.2 arcsec accuracy requirement. It reduces the weight, eliminates the mercury, and dramatically reduces observation times. The new astrolabe consists of a 101 mm aperture telescope with a 1.5° field of view and an inclinometer mounted inside a 92-cm high, 30-cm diameter tube, an external GPS receiver for timing, and a laptop computer that controls and monitors the instrument and performs the computations. Star images are recorded by an astronomical-grade camera with a 2,048 x 2,048 pixel CCD sensor that is externally triggered by time pulses from the GPS receiver. The prototype was designed for nighttime observation of visible stars equal to or brighter than magnitude 10.0. The inclinometer is a system of two orthogonal pendula that define the local gravitational vertical, each consisting of a brass plumb bob suspended from an aluminized polymer ribbon set between two electrodes. An internal reference collimator is rigidly tied to the inclinometer and projects an array of reference points of light onto the CCD sensor. After the astrolabe is coarsely leveled to within 20 arcsec, voice coil actuators automatically adjust and maintain the inclinometer vertical to within 0.02 arcsec. Independent images are collected at 6 second intervals using a 200 msec exposure time. The CCD coordinates are determined for each star and a collimator reference point on each image. Stars are identified by referencing a customized star catalog produced by USNO. A

Climate change and environmentally responsible behavior on the Great Barrier Reef, Australia

Science.gov (United States)

Jee In Yoon; Gerard Kyle; Carena J. vanRiper; Stephen G. Sutton

2012-01-01

This study explored the relationship between Australians' perceptions of climate change, its impact on the Great Barrier Reef (GBR), and predictors of environmentally responsible behavior (ERB). Our hypothesized model suggested that general attitudes toward climate change, social pressure for engaging in ERBs (subjective norms), and perceived behavioral control (...

Geomorphology and sediment transport on a submerged back-reef sand apron: One Tree Reef, Great Barrier Reef

Science.gov (United States)

Harris, Daniel L.; Vila-Concejo, Ana; Webster, Jody M.

2014-10-01

Back-reef sand aprons are conspicuous and dynamic sedimentary features in coral reef systems. The development of these features influences the evolution and defines the maturity of coral reefs. However, the hydrodynamic processes that drive changes on sand aprons are poorly understood with only a few studies directly assessing sediment entrainment and transport. Current and wave conditions on a back-reef sand apron were measured during this study and a digital elevation model was developed through topographic and bathymetric surveying of the sand apron, reef flats and lagoon. The current and wave processes that may entrain and transport sediment were assessed using second order small amplitude (Stokes) wave theory and Shields equations. The morphodynamic interactions between current flow and geomorphology were also examined. The results showed that sediment transport occurs under modal hydrodynamic conditions with waves the main force entraining sediment rather than average currents. A morphodynamic relationship between current flow and geomorphology was also observed with current flow primarily towards the lagoon in shallow areas of the sand apron and deeper channel-like areas directing current off the sand apron towards the lagoon or the reef crest. These results show that the short-term mutual interaction of hydrodynamics and geomorphology in coral reefs can result in morphodynamic equilibrium.

Effectiveness of benthic foraminiferal and coral assemblages as water quality indicators on inshore reefs of the Great Barrier Reef, Australia

Science.gov (United States)

Uthicke, S.; Thompson, A.; Schaffelke, B.

2010-03-01

Although the debate about coral reef decline focuses on global disturbances (e.g., increasing temperatures and acidification), local stressors (nutrient runoff and overfishing) continue to affect reef health and resilience. The effectiveness of foraminiferal and hard-coral assemblages as indicators of changes in water quality was assessed on 27 inshore reefs along the Great Barrier Reef. Environmental variables (i.e., several water quality and sediment parameters) and the composition of both benthic foraminiferal and hard-coral assemblages differed significantly between four regions (Whitsunday, Burdekin, Fitzroy, and the Wet Tropics). Grain size and organic carbon and nitrogen content of sediments, and a composite water column parameter (based on turbidity and concentrations of particulate matter) explained a significant amount of variation in the data (tested by redundancy analyses) in both assemblages. Heterotrophic species of foraminifera were dominant in sediments with high organic content and in localities with low light availability, whereas symbiont-bearing mixotrophic species were dominant elsewhere. A similar suite of parameters explained 89% of the variation in the FORAM index (a Caribbean coral reef health indicator) and 61% in foraminiferal species richness. Coral richness was not related to environmental setting. Coral assemblages varied in response to environmental variables, but were strongly shaped by acute disturbances (e.g., cyclones, Acanthaster planci outbreaks, and bleaching), thus different coral assemblages may be found at sites with the same environmental conditions. Disturbances also affect foraminiferal assemblages, but they appeared to recover more rapidly than corals. Foraminiferal assemblages are effective bioindicators of turbidity/light regimes and organic enrichment of sediments on coral reefs.

Building resilience into practical conservation: identifying local management responses to global climate change in the southern Great Barrier Reef

Science.gov (United States)

Maynard, J. A.; Marshall, P. A.; Johnson, J. E.; Harman, S.

2010-06-01

Climate change is now considered the greatest long-term threat to coral reefs, with some future change inevitable despite mitigation efforts. Managers must therefore focus on supporting the natural resilience of reefs, requiring that resilient reefs and reef regions be identified. We develop a framework for assessing resilience and trial it by applying the framework to target management responses to climate change on the southern Great Barrier Reef. The framework generates a resilience score for a site based on the evaluation of 19 differentially weighted indicators known or thought to confer resilience to coral reefs. Scores are summed, and sites within a region are ranked in terms of (1) their resilience relative to the other sites being assessed, and (2) the extent to which managers can influence their resilience. The framework was applied to 31 sites in Keppel Bay of the southern Great Barrier Reef, which has a long history of disturbance and recovery. Resilience and ‘management influence potential’ were both found to vary widely in Keppel Bay, informing site selection for the staged implementation of resilience-based management strategies. The assessment framework represents a step towards making the concept of resilience operational to reef managers and conservationists. Also, it is customisable, easy to teach and implement and effective in building support among local communities and stakeholders for management responses to climate change.

Anthropogenic contaminants in Indo-Pacific humpback and Australian snubfin dolphins from the central and southern Great Barrier Reef

International Nuclear Information System (INIS)

Cagnazzi, Daniele; Fossi, Maria Cristina; Parra, Guido J.; Harrison, Peter L.; Maltese, Silvia; Coppola, Daniele; Soccodato, Alice; Bent, Michael; Marsili, Letizia

2013-01-01

We present the first evidence of accumulation of organochlorine compounds (DDTs, PCBs, HCB) and polycyclic aromatic hydrocarbons (PAHs) in Indo-Pacific humpback and Australian snubfin dolphins from the central and southern Great Barrier Reef. These dolphins are considered by the Great Barrier Marine Park Authority to be high priority species for management. Analyses of biopsy samples, collected from free ranging individuals, showed PAHs levels comparable to those reported from highly industrialized countries. DDTs and HCB were found at low levels, while in some individuals, PCBs were above thresholds over which immunosuppression and reproductive anomalies occur. These results highlight the need for ongoing monitoring of these and other contaminants, and their potential adverse effects on dolphins and other marine fauna. This is particularly important given the current strategic assessment of the Great Barrier Reef World Heritage Area being undertaken by the Australian Government and the Queensland Government. -- Potentially hazardous levels of some coastal contaminants were found in two species of dolphins inhabiting the Great Barrier Reef Marine Park coastal region

Coral-macroalgal phase shifts or reef resilience: links with diversity and functional roles of herbivorous fishes on the Great Barrier Reef

Science.gov (United States)

Cheal, A. J.; MacNeil, M. Aaron; Cripps, E.; Emslie, M. J.; Jonker, M.; Schaffelke, B.; Sweatman, H.

2010-12-01

Changes from coral to macroalgal dominance following disturbances to corals symbolize the global degradation of coral reefs. The development of effective conservation measures depends on understanding the causes of such phase shifts. The prevailing view that coral-macroalgal phase shifts commonly occur due to insufficient grazing by fishes is based on correlation with overfishing and inferences from models and small-scale experiments rather than on long-term quantitative field studies of fish communities at affected and resilient sites. Consequently, the specific characteristics of herbivorous fish communities that most promote reef resilience under natural conditions are not known, though this information is critical for identifying vulnerable ecosystems. In this study, 11 years of field surveys recorded the development of the most persistent coral-macroalgal phase shift (>7 years) yet observed on Australia’s Great Barrier Reef (GBR). This shift followed extensive coral mortality caused by thermal stress (coral bleaching) and damaging storms. Comparisons with two similar reefs that suffered similar disturbances but recovered relatively rapidly demonstrated that the phase shift occurred despite high abundances of one herbivore functional group (scraping/excavating parrotfishes: Labridae). However, the shift was strongly associated with low fish herbivore diversity and low abundances of algal browsers (predominantly Siganidae) and grazers/detritivores (Acanthuridae), suggesting that one or more of these factors underpin reef resilience and so deserve particular protection. Herbivorous fishes are not harvested on the GBR, and the phase shift was not enhanced by unusually high nutrient levels. This shows that unexploited populations of herbivorous fishes cannot ensure reef resilience even under benign conditions and suggests that reefs could lose resilience under relatively low fishing pressure. Predictions of more severe and widespread coral mortality due to global

Monitoring the environment and human sentiment on the Great Barrier Reef: Assessing the potential of collective sensing.

Science.gov (United States)

Becken, Susanne; Stantic, Bela; Chen, Jinyan; Alaei, Ali Reza; Connolly, Rod M

2017-12-01

With the growth of smartphone usage the number of social media posts has significantly increased and represents potentially valuable information for management, including of natural resources and the environment. Already, evidence of using 'human sensor' in crises management suggests that collective knowledge could be used to complement traditional monitoring. This research uses Twitter data posted from the Great Barrier Reef region, Australia, to assess whether the extent and type of data could be used to Great Barrier Reef organisations as part of their monitoring program. The analysis reveals that large amounts of tweets, covering the geographic area of interest, are available and that the pool of information providers is greatly enhanced by the large number of tourists to this region. A keyword and sentiment analysis demonstrates the usefulness of the Twitter data, but also highlights that the actual number of Reef-related tweets is comparatively small and lacks specificity. Suggestions for further steps towards the development of an integrative data platform that incorporates social media are provided. Copyright © 2017 Elsevier Ltd. All rights reserved.

Keeping the ‘Great’ in the Great Barrier Reef: large-scale governance of the Great Barrier Reef Marine Park

Directory of Open Access Journals (Sweden)

Louisa S. Evans

2014-08-01

Full Text Available As part of an international collaboration to compare large-scale commons, we used the Social-Ecological Systems Meta-Analysis Database (SESMAD to systematically map out attributes of and changes in the Great Barrier Reef Marine Park (GBRMP in Australia. We focus on eight design principles from common-pool resource (CPR theory and other key social-ecological systems governance variables, and explore to what extent they help explain the social and ecological outcomes of park management through time. Our analysis showed that commercial fisheries management and the re-zoning of the GBRMP in 2004 led to improvements in ecological condition of the reef, particularly fisheries. These boundary and rights changes were supported by effective monitoring, sanctioning and conflict resolution. Moderate biophysical connectivity was also important for improved outcomes. However, our analysis also highlighted that continued challenges to improved ecological health in terms of coral cover and biodiversity can be explained by fuzzy boundaries between land and sea, and the significance of external drivers to even large-scale social-ecological systems (SES. While ecological and institutional fit in the marine SES was high, this was not the case when considering the coastal SES. Nested governance arrangements become even more important at this larger scale. To our knowledge, our paper provides the first analysis linking the re-zoning of the GBRMP to CPR and SES theory. We discuss important challenges to coding large-scale systems for meta-analysis.

Effects of Great Barrier Reef degradation on recreational reef-trip demand: a contingent behaviour approach

NARCIS (Netherlands)

Kragt, M.E.; Roebeling, P.C.; Ruijs, A.J.W.

2009-01-01

There is a growing concern that increased nutrient and sediment runoff from river catchments are a potential source of coral reef degradation. Degradation of reefs may affect the number of tourists visiting the reef and, consequently, the economic sectors that rely on healthy reefs for their income

Climate change disables coral bleaching protection on the Great Barrier Reef.

Science.gov (United States)

Ainsworth, Tracy D; Heron, Scott F; Ortiz, Juan Carlos; Mumby, Peter J; Grech, Alana; Ogawa, Daisie; Eakin, C Mark; Leggat, William

2016-04-15

Coral bleaching events threaten the sustainability of the Great Barrier Reef (GBR). Here we show that bleaching events of the past three decades have been mitigated by induced thermal tolerance of reef-building corals, and this protective mechanism is likely to be lost under near-future climate change scenarios. We show that 75% of past thermal stress events have been characterized by a temperature trajectory that subjects corals to a protective, sub-bleaching stress, before reaching temperatures that cause bleaching. Such conditions confer thermal tolerance, decreasing coral cell mortality and symbiont loss during bleaching by over 50%. We find that near-future increases in local temperature of as little as 0.5°C result in this protective mechanism being lost, which may increase the rate of degradation of the GBR. Copyright © 2016, American Association for the Advancement of Science.

Elevated land runoff after European settlement perturbs persistent foraminiferal assemblages on the Great Barrier Reef.

Science.gov (United States)

Uthicke, S; Patel, F; Ditchburn, R

2012-01-01

Coral reefs are under pressure from a variety of human-induced disturbances, but demonstration of ecosystem changes and identification of stressors are often difficult. We tested whether global change or increased agricultural runoff after European settlement of Northeast Australia (ca. 1860) has affected inshore reefs of the Great Barrier Reef. Eleven sediment cores were retrieved from inner reefs, intermediate reefs, and outer-island reefs, and benthic foraminiferal assemblages were analyzed in dated (14C, 210Pb, 137Cs) core sections (N = 82 samples). Data were grouped into six age bands ( 1500 yr). Principal component analysis and two-factor (Zone and Age) permutational analysis of variance (PERMANOVA) suggested that assemblages from the three zones were significantly different from each other over several millennia, with symbiont-bearing (mixotrophic) species dominating the outer reefs. A significant interaction term indicated that within-zone patterns varied. Assemblages in outer reefs unaffected from increased land runoff were persistent until present times. In both other zones, assemblages were also persistent until 150 yr ago, suggesting that benthic foraminiferal assemblages are naturally highly persistent over long (> 2000 yr) timescales. Assemblages in core sections PERMANOVA. With some exceptions, changes on the inner and intermediate reefs were consistent with a model predicting that increased nutrients and higher turbidity enhance relative abundance of heterotrophic species. Given that assemblages did not change in outer-island reefs (not impacted by runoff) we argue that changes in assemblages due to global change can be rejected as an explanation. Thus, the findings are more consistent with the hypothesis that agricultural runoff since European settlement altered foraminiferal assemblages than with the hypothesis that global forcing caused changes.

Coral reefs of the turbid inner-shelf of the Great Barrier Reef, Australia: An environmental and geomorphic perspective on their occurrence, composition and growth

Science.gov (United States)

Browne, N. K.; Smithers, S. G.; Perry, C. T.

2012-10-01

Investigations of the geomorphic and sedimentary context in which turbid zone reefs exist, both in the modern and fossil reef record, can inform key ecological debates regarding species tolerances and adaptability to elevated turbidity and sedimentation. Furthermore, these investigations can address critical geological and palaeoecological questions surrounding longer-term coral-sediment interactions and reef growth histories. Here we review current knowledge about turbid zone reefs from the inner-shelf regions of the Great Barrier Reef (GBR) in Australia to consider these issues and to evaluate reef growth in the period prior to and post European settlement. We also consider the future prospects of these reefs under reported changing water quality regimes. Turbid zone reefs on the GBR are relatively well known compared to those in other reef regions. They occur within 20 km of the mainland coast where reef development may be influenced by continual or episodic terrigenous sediment inputs, fluctuating salinities (24-36 ppt), and reduced water quality through increased nutrient and pollutant delivery from urban and agricultural runoff. Individually, and in synergy, these environmental conditions are widely viewed as unfavourable for sustained and vigorous coral reef growth, and thus these reefs are widely perceived as marginal compared to clear water reef systems. However, recent research has revealed that this view is misleading, and that in fact many turbid zone reefs in this region are resilient, exhibit relatively high live coral cover (> 30%) and have distinctive community assemblages dominated by fast growing (Acropora, Montipora) and/or sediment tolerant species (Turbinaria, Goniopora, Galaxea, Porites). Palaeoecological reconstructions based on the analysis of reef cores show that community assemblages are relatively stable at millennial timescales, and that many reefs are actively accreting (average 2-7 mm/year) where accommodation space is available

Benthic Foraminifera as ecological indicators for water quality on the Great Barrier Reef

Science.gov (United States)

Uthicke, Sven; Nobes, Kristie

2008-07-01

Benthic foraminifera are established indicators for Water Quality (WQ) in Florida and the Caribbean. However, nearshore coral reefs of the Great Barrier Reef (GBR) and other Pacific regions are also subjected to increased nutrient and sediment loads. Here, we investigate the use of benthic foraminifera as indicators to assess status and trends of WQ on GBR reefs. We quantified several sediment parameters and the foraminiferan assemblage composition on 20 reefs in four geographic regions of the GBR, and along a water column nutrient and turbidity gradient. Twenty-seven easily recognisable benthic foraminiferan taxa (>63 μm) were distinguished. All four geographic regions differed significantly ( p turbid inner shelf towards clearer outer shelf reefs. A RDA separated symbiotic and aposymbiotic (heterotrophic) taxa. In addition, total suspended solid and water column chlorophyll a concentrations were negatively correlated, and optical depth and distance to the mainland were positively correlated, with the abundance of symbiont-bearing taxa. Several large foraminifera were identified as indicators for offshore, clear water conditions. In contrast, heterotrophic rotaliids and a species retaining plastids ( Elphidium sp.) where highly characteristic for low light, higher nutrient conditions. Application of the FORAM index to GBR assemblage composition showed a significant increase in the value of this index with increased distance from the mainland in the Whitsunday region ( r2 = 0.75, p < 0.001), and therefore with increasing light and decreased nutrient availability. We conclude that it will be possible to apply this index to GBR and possibly other Pacific reefs after some adaptations and additional experimental work on species-specific limiting factors.

Intra-annual variation in turbidity in response to terrestrial runoff on near-shore coral reefs of the Great Barrier Reef

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Fabricius, Katharina E.; De'ath, Glenn; Humphrey, Craig; Zagorskis, Irena; Schaffelke, Britta

2013-01-01

Seawater turbidity is a fundamental driver of the ecology of coastal marine systems, and is widely used as indicator for environmental reporting. However, the time scales and processes leading to changes in turbidity in tropical coastal waters remain poorly understood. This study investigates the main determinants of inshore turbidity in four inshore regions along ˜1000 km of the Australian Great Barrier Reef, based on ˜3 years of almost continuous in situ turbidity logger data on 14 reefs. Generalized additive mixed models were used to predict spatial and temporal variation in weekly mean turbidity based on variation in resuspension and runoff conditions. At any given wave height, wave period and tidal range, turbidity was significantly affected by river flow and rainfall. Averaged across all reefs, turbidity was 13% lower (range: 5-37%) in weeks with low compared with high rainfall and river flows. Additionally, turbidity was on average 43% lower 250 days into the dry season than at the start of the dry season on reefs with long-term mean turbidity >1.1 NTU. The data suggest the time scale of winnowing or consolidation of newly imported materials in this zone is months to years. In contrast, turbidity returned to low levels within weeks after river flows and rainfall on reefs with long-term mean turbidity of <1.1 NTU. Turbidity was also up to 10-fold higher on reefs near compared to away from river mouths, suggesting inter-annual accumulation of fine resuspendible sediments. The study suggests that a reduction in the river loads of fine sediments and nutrients through improved land management should lead to measurably improved inshore water clarity in the most turbid parts of the GBR.

Molecular confirmation of hybridization between Dascyllus reticulatus × Dascyllus aruanus from the Great Barrier Reef

KAUST Repository

He, Song; Johansen, Jacob L.; Hoey, Andrew S.; Pappas, Melissa; Berumen, Michael L.

2017-01-01

To date, more than 81 species of tropical coral reef fish have been reported to hybridize in nature, spanning multiple families, including the Chaetodontidae, Pomacanthidae, and Labridae. Hybridization, however, is seemingly rare among benthic nesting species that engage in pair spawning, such as the Pomacentridae. Here, we present evidence for the first molecularly confirmed record of hybridization within the genus Dascyllus; D. aruanus and D. reticulatus. Interestingly, although many hybridization events are attributed to peripheral range effects or areas of limited overlap among otherwise allopatric species, this hybrid individual was collected from the northern Great Barrier Reef, centrally located within the distribution ranges of both species. The hybrid exhibited coloration and meristic counts intermediate between D. aruanus and D. reticulatus. Diagnostic genetic markers and subsequent microsatellites analysis confirmed that this individual was a hybrid offspring of D. aruanus and D. reticulatus, with the latter providing the maternal contribution. The occurrence of the D. aruanus × D. reticulatus hybrid on the Great Barrier Reef represents an exception to the otherwise species-specific haplotypes. The nuclear diagnostic marker which was identified during this study could serve as a hybrid indicator and benefit future hybrid investigations for hybridization between these two species.

Molecular confirmation of hybridization between Dascyllus reticulatus × Dascyllus aruanus from the Great Barrier Reef

KAUST Repository

He, Song

2017-11-17

To date, more than 81 species of tropical coral reef fish have been reported to hybridize in nature, spanning multiple families, including the Chaetodontidae, Pomacanthidae, and Labridae. Hybridization, however, is seemingly rare among benthic nesting species that engage in pair spawning, such as the Pomacentridae. Here, we present evidence for the first molecularly confirmed record of hybridization within the genus Dascyllus; D. aruanus and D. reticulatus. Interestingly, although many hybridization events are attributed to peripheral range effects or areas of limited overlap among otherwise allopatric species, this hybrid individual was collected from the northern Great Barrier Reef, centrally located within the distribution ranges of both species. The hybrid exhibited coloration and meristic counts intermediate between D. aruanus and D. reticulatus. Diagnostic genetic markers and subsequent microsatellites analysis confirmed that this individual was a hybrid offspring of D. aruanus and D. reticulatus, with the latter providing the maternal contribution. The occurrence of the D. aruanus × D. reticulatus hybrid on the Great Barrier Reef represents an exception to the otherwise species-specific haplotypes. The nuclear diagnostic marker which was identified during this study could serve as a hybrid indicator and benefit future hybrid investigations for hybridization between these two species.

Lower Mesophotic Coral Communities (60-125 m Depth of the Northern Great Barrier Reef and Coral Sea.

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Norbert Englebert

Full Text Available Mesophotic coral ecosystems in the Indo-Pacific remain relatively unexplored, particularly at lower mesophotic depths (≥60 m, despite their potentially large spatial extent. Here, we used a remotely operated vehicle to conduct a qualitative assessment of the zooxanthellate coral community at lower mesophotic depths (60-125 m at 10 different locations in the Great Barrier Reef Marine Park and the Coral Sea Commonwealth Marine Reserve. Lower mesophotic coral communities were present at all 10 locations, with zooxanthellate scleractinian corals extending down to ~100 metres on walls and ~125 m on steep slopes. Lower mesophotic coral communities were most diverse in the 60-80 m zone, while at depths of ≥100 m the coral community consisted almost exclusively of the genus Leptoseris. Collections of coral specimens (n = 213 between 60 and 125 m depth confirmed the presence of at least 29 different species belonging to 18 genera, including several potential new species and geographic/depth range extensions. Overall, this study highlights that lower mesophotic coral ecosystems are likely to be ubiquitous features on the outer reefs of the Great Barrier Reef and atolls of the Coral Sea, and harbour a generic and species richness of corals that is much higher than thus far reported. Further research efforts are urgently required to better understand and manage these ecosystems as part of the Great Barrier Reef Marine Park and Coral Sea Commonwealth Marine Reserve.

Surviving coral bleaching events: porites growth anomalies on the Great Barrier Reef.

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Cantin, Neal E; Lough, Janice M

2014-01-01

Mass coral bleaching affected large parts of the Great Barrier Reef (GBR) in 1998 and 2002. In this study, we assessed if signatures of these major thermal stress events were recorded in the growth characteristics of massive Porites colonies. In 2005 a suite of short (bleaching. Sites included inshore (Nelly Bay, Pandora Reef), annually affected by freshwater flood events, midshelf (Rib Reef), only occasionally affected by freshwater floods and offshore (Myrmidon Reef) locations primarily exposed to open ocean conditions. Annual growth characteristics (extension, density and calcification) were measured in 144 cores from 79 coral colonies and analysed over the common 24-year period, 1980-2003. Visual examination of the annual density bands revealed growth hiatuses associated with the bleaching years in the form of abrupt decreases in annual linear extension rates, high density stress bands and partial mortality. The 1998 mass-bleaching event reduced Porites calcification by 13 and 18% on the two inshore locations for 4 years, followed by recovery to baseline calcification rates in 2002. Evidence of partial mortality was apparent in 10% of the offshore colonies in 2002; however no significant effects of the bleaching events were evident in the calcification rates at the mid shelf and offshore sites. These results highlight the spatial variation of mass bleaching events and that all reef locations within the GBR were not equally stressed by the 1998 and 2002 mass bleaching events, as some models tend to suggest, which enabled recovery of calcification on the GBR within 4 years. The dynamics in annual calcification rates and recovery displayed here should be used to improve model outputs that project how coral calcification will respond to ongoing warming of the tropical oceans.

Disease outbreaks, bleaching and a cyclone drive changes in coral assemblages on an inshore reef of the Great Barrier Reef

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Haapkylä, J.; Melbourne-Thomas, J.; Flavell, M.; Willis, B. L.

2013-09-01

Coral disease is a major threat to the resilience of coral reefs; thus, understanding linkages between disease outbreaks and disturbances predicted to increase with climate change is becoming increasingly important. Coral disease surveys conducted twice yearly between 2008 and 2011 at a turbid inshore reef in the central Great Barrier Reef spanned two disturbance events, a coral bleaching event in 2009 and a severe cyclone (cyclone `Yasi') in 2011. Surveys of coral cover, community structure and disease prevalence throughout this 4-yr study provide a unique opportunity to explore cumulative impacts of disturbance events and disease for inshore coral assemblages. The principal coral disease at the study site was atramentous necrosis (AtN), and it primarily affected the key inshore, reef-building coral Montipora aequituberculata. Other diseases detected were growth anomalies, white syndrome and brown band syndrome. Diseases affected eight coral genera, although Montipora was, by far, the genus mostly affected. The prevalence of AtN followed a clear seasonal pattern, with disease outbreaks occurring only in wet seasons. Mean prevalence of AtN on Montipora spp. (63.8 % ± 3.03) was three- to tenfold greater in the wet season of 2009, which coincided with the 2009 bleaching event, than in other years. Persistent wet season outbreaks of AtN combined with the impacts of bleaching and cyclone events resulted in a 50-80 % proportional decline in total coral cover. The greatest losses of branching and tabular acroporids occurred following the low-salinity-induced bleaching event of 2009, and the greatest losses of laminar montiporids occurred following AtN outbreaks in 2009 and in 2011 following cyclone Yasi. The shift to a less diverse coral assemblage and the concomitant loss of structural complexity are likely to have long-term consequences for associated vertebrate and invertebrate communities on Magnetic Island reefs.

Ocean acidification: Linking science to management solutions using the Great Barrier Reef as a case study.

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Albright, Rebecca; Anthony, Kenneth R N; Baird, Mark; Beeden, Roger; Byrne, Maria; Collier, Catherine; Dove, Sophie; Fabricius, Katharina; Hoegh-Guldberg, Ove; Kelly, Ryan P; Lough, Janice; Mongin, Mathieu; Munday, Philip L; Pears, Rachel J; Russell, Bayden D; Tilbrook, Bronte; Abal, Eva

2016-11-01

Coral reefs are one of the most vulnerable ecosystems to ocean acidification. While our understanding of the potential impacts of ocean acidification on coral reef ecosystems is growing, gaps remain that limit our ability to translate scientific knowledge into management action. To guide solution-based research, we review the current knowledge of ocean acidification impacts on coral reefs alongside management needs and priorities. We use the world's largest continuous reef system, Australia's Great Barrier Reef (GBR), as a case study. We integrate scientific knowledge gained from a variety of approaches (e.g., laboratory studies, field observations, and ecosystem modelling) and scales (e.g., cell, organism, ecosystem) that underpin a systems-level understanding of how ocean acidification is likely to impact the GBR and associated goods and services. We then discuss local and regional management options that may be effective to help mitigate the effects of ocean acidification on the GBR, with likely application to other coral reef systems. We develop a research framework for linking solution-based ocean acidification research to practical management options. The framework assists in identifying effective and cost-efficient options for supporting ecosystem resilience. The framework enables on-the-ground OA management to be the focus, while not losing sight of CO2 mitigation as the ultimate solution. Copyright © 2016 Elsevier Ltd. All rights reserved.

Joint estimation of crown of thorns (Acanthaster planci densities on the Great Barrier Reef

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M. Aaron MacNeil

2016-08-01

Full Text Available Crown-of-thorns starfish (CoTS; Acanthaster spp. are an outbreaking pest among many Indo-Pacific coral reefs that cause substantial ecological and economic damage. Despite ongoing CoTS research, there remain critical gaps in observing CoTS populations and accurately estimating their numbers, greatly limiting understanding of the causes and sources of CoTS outbreaks. Here we address two of these gaps by (1 estimating the detectability of adult CoTS on typical underwater visual count (UVC surveys using covariates and (2 inter-calibrating multiple data sources to estimate CoTS densities within the Cairns sector of the Great Barrier Reef (GBR. We find that, on average, CoTS detectability is high at 0.82 [0.77, 0.87] (median highest posterior density (HPD and [95% uncertainty intervals], with CoTS disc width having the greatest influence on detection. Integrating this information with coincident surveys from alternative sampling programs, we estimate CoTS densities in the Cairns sector of the GBR averaged 44 [41, 48] adults per hectare in 2014.

ENSO Weather and Coral Bleaching on the Great Barrier Reef, Australia

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McGowan, Hamish; Theobald, Alison

2017-10-01

The most devastating mass coral bleaching has occurred during El Niño events, with bleaching reported to be a direct result of increased sea surface temperatures (SSTs). However, El Niño itself does not cause SSTs to rise in all regions that experience bleaching. Nor is the upper ocean warming trend of 0.11°C per decade since 1971, attributed to global warming, sufficient alone to exceed the thermal tolerance of corals. Here we show that weather patterns during El Niño that result in reduced cloud cover, higher than average air temperatures and higher than average atmospheric pressures, play a crucial role in determining the extent and location of coral bleaching on the world's largest coral reef system, the World Heritage Great Barrier Reef (GBR), Australia. Accordingly, synoptic-scale weather patterns and local atmosphere-ocean feedbacks related to El Niño-Southern Oscillation (ENSO) and not large-scale SST warming due to El Niño alone and/or global warming are often the cause of coral bleaching on the GBR.

MtDNA barcode identification of fish larvae in the southern Great Barrier Reef – Australia

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Graham G. Pegg

2006-10-01

Full Text Available Planktonic larvae were captured above a shallow coral reef study site on the Great Barrier Reef (GBR around spring-summer new moon periods (October-February using light trap or net capture devices. Larvae were identified to the genus or species level by comparison with a phylogenetic tree of tropical marine fish species using mtDNA HVR1 sequence data. Further analysis showed that within-species HVR1 sequence variation was typically 1-3%, whereas between-species variation for the same genus ranged up to 50%, supporting the suitability of HVR1 for species identification. Given the current worldwide interest in DNA barcoding and species identification using an alternative mtDNA gene marker (cox1, we also explored the efficacy of different primer sets for amplification of cox1 in reef fish, and its suitability for species identification. Of those tested, the Fish-F1 and -R1 primer set recently reported by Ward et al. (2005 gave the best results.

Towards environmental management of water turbidity within open coastal waters of the Great Barrier Reef.

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Macdonald, Rachael K; Ridd, Peter V; Whinney, James C; Larcombe, Piers; Neil, David T

2013-09-15

Water turbidity and suspended sediment concentration (SSC) are commonly used as part of marine monitoring and water quality plans. Current management plans utilise threshold SSC values derived from mean-annual turbidity concentrations. Little published work documents typical ranges of turbidity for reefs within open coastal waters. Here, time-series turbidity measurements from 61 sites in the Great Barrier Reef (GBR) and Moreton Bay, Australia, are presented as turbidity exceedance curves and derivatives. This contributes to the understanding of turbidity and SSC in the context of environmental management in open-coastal reef environments. Exceedance results indicate strong spatial and temporal variability in water turbidity across inter/intraregional scales. The highest turbidity across 61 sites, at 50% exceedance (T50) is 15.3 NTU and at 90% exceedance (T90) 4.1 NTU. Mean/median turbidity comparisons show strong differences between the two, consistent with a strongly skewed turbidity regime. Results may contribute towards promoting refinement of water quality management protocols. Copyright © 2013 Elsevier Ltd. All rights reserved.

Deepwater Chondrichthyan Bycatch of the Eastern King Prawn Fishery in the Southern Great Barrier Reef, Australia.

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Cassandra L Rigby

Full Text Available The deepwater chondrichthyan fauna of the Great Barrier Reef is poorly known and life history information is required to enable their effective management as they are inherently vulnerable to exploitation. The chondrichthyan bycatch from the deepwater eastern king prawn fishery at the Swain Reefs in the southern Great Barrier Reef was examined to determine the species present and provide information on their life histories. In all, 1533 individuals were collected from 11 deepwater chondrichthyan species, with the Argus skate Dipturus polyommata, piked spurdog Squalus megalops and pale spotted catshark Asymbolus pallidus the most commonly caught. All but one species is endemic to Australia with five species restricted to waters offshore from Queensland. The extent of life history information available for each species varied but the life history traits across all species were characteristic of deep water chondrichthyans with relatively large length at maturity, small litters and low ovarian fecundity; all indicative of low biological productivity. However, variability among these traits and spatial and bathymetric distributions of the species suggests differing degrees of resilience to fishing pressure. To ensure the sustainability of these bycatch species, monitoring of their catches in the deepwater eastern king prawn fishery is recommended.

Biology and ecology of the vulnerable holothuroid, Stichopus herrmanni, on a high-latitude coral reef on the Great Barrier Reef

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Wolfe, Kennedy; Byrne, Maria

2017-12-01

Tropical aspidochirotid holothuroids are among the largest coral reef invertebrates, but gaps remain in our understanding of their ecological roles in lagoon sediment habitats, a vast component of coral-reef ecosystems. Stichopus herrmanni, listed as vulnerable (IUCN), is currently a major fishery species on the Great Barrier Reef (GBR) and throughout the Indo-Pacific. It is critical to characterise how this species interacts with its environment to understand how its removal may impact ecosystem functionality. We investigated seasonal variation in movement, bioturbation, feeding and gonad development of S. herrmanni over 3 yr at One Tree Reef, which has been a no-take area for decades. We determined the direct influence of the deposit-feeding activity of S. herrmanni on sediment turnover and granulometry, and on the abundance of infauna and benthic productivity in a comprehensive in situ analysis of tropical holothuroid feeding ecology. This species is highly mobile with identifiable individuals exhibiting site fidelity over 3 yr. With the potential to turn over an estimated 64-250 kg individual-1 yr-1, S. herrmanni is a major bioturbator. Stichopus herrmanni is a generalist feeder and influences trophic interactions by altering the abundance of infauna and microalgae. Stichopus herrmanni exhibited decreased feeding activity and gonad development in winter, the first documentation of a seasonal disparity in the bioturbation activity of a tropical holothuroid. Sediment digestion and dissolution by S. herrmanni has the potential to influence seawater chemistry, a particularly important feature in a changing ocean. Our results provide essential baseline data on the functional roles of this ecologically important species to inform development of ecosystem-based bêche-de-mer fisheries management on the GBR.

Eddy covariance measurement of the spatial heterogeneity of surface energy exchanges over Heron Reef, Great Barrier Reef, Australia

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MacKellar, M.; McGowan, H. A.; Phinn, S. R.

2011-12-01

Coral reefs cover 2.8 to 6.0 x 105 km2 of the Earth's surface and are warm, shallow regions that are believed to contribute enhanced sensible and latent heat to the atmosphere, relative to the surrounding ocean. To predict the impact of climate variability on coral reefs and their weather and climate including cloud, winds, rainfall patterns and cyclone genesis, accurate parameterisation of air-sea energy exchanges over coral reefs is essential. This is also important for the parameterisation and validation of regional to global scale forecast models to improve prediction of tropical and sub-tropical marine and coastal weather. Eddy covariance measurements of air-sea fluxes over coral reefs are rare due to the complexities of installing instrumentation over shallow, tidal water. Consequently, measurements of radiation and turbulent flux data for coral reefs have been captured remotely (satellite data) or via single measurement sites downwind of coral reefs (e.g. terrestrial or shipboard instrumentation). The resolution of such measurements and those that have been made at single locations on reefs may not capture the spatial heterogeneity of surface-atmosphere energy exchanges due to the different geomorphic and biological zones on coral reefs. Accordingly, the heterogeneity of coral reefs with regard to substrate, benthic communities and hydrodynamic processes are not considered in the characterization of the surface radiation energy flux transfers across the water-atmosphere interface. In this paper we present a unique dataset of concurrent in situ eddy covariance measurements made on instrumented pontoons of the surface energy balance over different geomorphic zones of a coral reef (shallow reef flat, shallow and deep lagoons). Significant differences in radiation transfers and air-sea turbulent flux exchanges over the reef were highlighted, with higher Bowen ratios over the shallow reef flat. Increasing wind speed was shown to increase flux divergence between

Climate change and the Great Barrier Reef

International Nuclear Information System (INIS)

Johnson, Johanna; Marshall, Paul

2007-01-01

Full text: Full text: Climate change is now recognised as the greatest long-term threat to the Great Barrier Reef (GBR). Managers face a future in which the impacts of climate change on tropical marine ecosystems are becoming increasingly frequent and severe. Further degradation is inevitable as the climate continues to change but the extent of the decline will depend on the rate and magnitude of climate change and the resilience of the ecosystem. Changes to the ecosystem have implications for the industries and regional communities that depend on the GBR. Climate projections for the GBR region include increasing air and sea temperatures, ocean acidification, nutrient enrichment (via changes in rainfall), altered light levels, more extreme weather events, changes to ocean circulation and sea level rise. Impacts have already been observed, with severe coral bleaching events in 1998 and 2002, and mass mortalities of seabirds linked to anomalously warm summer conditions. Climate change also poses significant threats to the industries and communities that depend on the GBR ecosystem, both directly and indirectly through loss of natural resources; industries such as recreational and commercial fishing, and tourism, which contributes to a regional tourism industry worth $6.1 billion (Access Economics 2005). A vulnerability assessment undertaken by leading experts in climate and marine science identified climate sensitivities for GBR species, habitats, key processes, GBR industries and communities (Johnson and Marshall 2007). This information has been used to develop a Climate Change Action Plan for the GBR. The Action Plan is a five-year program aimed at facilitating targeted science, building a resilient ecosystem, assisting adaptation of industries and communities, and reducing climate footprints. The Action Plan identifies strategies to review current management arrangements and raise awareness of the issue in order to work towards a resilient ecosystem. Integral to

Phytotoxicity induced in isolated zooxanthellae by herbicides extracted from Great Barrier Reef flood waters.

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Shaw, C M; Brodie, J; Mueller, J F

2012-01-01

To date there has been limited evidence anthropogenically sourced pollution from catchments reaching corals of the Great Barrier Reef (GBR). In this study, freshly isolated zooxanthellae were exposed to polar chemicals (chiefly herbicides) extracted from water samples collected in a flood plume in the GBR lagoon. Photosynthetic potential of the isolated zooxanthellae declined after exposure to concentrated extracts (10 times) from all but one of the sampling sites. Photosynthetic potential demonstrated a significant positive relationship with the concentration of diuron in the concentrated extracts and a significant inverse relationship with salinity measured at the sampling site. This study demonstrates that runoff from land based application of herbicides may reduce photosynthetic efficiency in corals of inshore reefs in the GBR. The ecological impacts of the chemicals in combination with other potential stressors on corals remain unclear. Copyright © 2012 Elsevier Ltd. All rights reserved.

The importance of coral larval recruitment for the recovery of reefs impacted by cyclone Yasi in the central Great Barrier Reef.

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Vimoksalehi Lukoschek

Full Text Available Cyclone Yasi, one of the most severe tropical storms on record, crossed the central Great Barrier Reef (GBR in February 2011, bringing wind speeds of up to 285 km hr⁻¹ and wave heights of at least 10 m, and causing massive destruction to exposed reefs in the Palm Island Group. Following the cyclone, mean (± S.E. hard coral cover ranged from just 2.1 (0.2 % to 5.3 (0.4 % on exposed reefs and no reproductively mature colonies of any species of Acropora remained. Although no fragments of Acropora were found at impacted exposed sites following the cyclone, small juvenile colonies of Acropora (<10 cm diameter were present, suggesting that their small size and compact morphologies enabled them to survive the cyclone. By contrast, sheltered reefs appeared to be unaffected by the cyclone. Mean (± S.E. hard coral cover ranged from 18.2 (2.4 % to 30.0 (1.0 % and a large proportion of colonies of Acropora were reproductively mature. Macroalgae accounted for 8 to 16% of benthic cover at exposed sites impacted by cyclone Yasi but were absent at sheltered sites. Mean (± S.E. recruitment of acroporids to settlement tiles declined from 25.3 (4.8 recruits tile⁻¹ in the pre-cyclone spawning event (2010 to 15.4 (2.2 recruits tile⁻¹ in the first post-cyclone spawning event (2011. Yet, post-cyclone recruitment did not differ between exposed (15.2±2.1 S.E. and sheltered sites (15.6±2.2 S.E., despite the loss of reproductive colonies at the exposed sites, indicating larval input from external sources. Spatial variation in impacts, the survival of small colonies, and larval replenishment to impacted reefs suggest that populations of Acropora have the potential to recover from this severe disturbance, provided that the Palm Islands are not impacted by acute disturbances or suffer additional chronic stressors in the near future.

Do clouds save the great barrier reef? satellite imagery elucidates the cloud-SST relationship at the local scale.

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Susannah M Leahy

Full Text Available Evidence of global climate change and rising sea surface temperatures (SSTs is now well documented in the scientific literature. With corals already living close to their thermal maxima, increases in SSTs are of great concern for the survival of coral reefs. Cloud feedback processes may have the potential to constrain SSTs, serving to enforce an "ocean thermostat" and promoting the survival of coral reefs. In this study, it was hypothesized that cloud cover can affect summer SSTs in the tropics. Detailed direct and lagged relationships between cloud cover and SST across the central Great Barrier Reef (GBR shelf were investigated using data from satellite imagery and in situ temperature and light loggers during two relatively hot summers (2005 and 2006 and two relatively cool summers (2007 and 2008. Across all study summers and shelf positions, SSTs exhibited distinct drops during periods of high cloud cover, and conversely, SST increases during periods of low cloud cover, with a three-day temporal lag between a change in cloud cover and a subsequent change in SST. Cloud cover alone was responsible for up to 32.1% of the variation in SSTs three days later. The relationship was strongest in both El Niño (2005 and La Niña (2008 study summers and at the inner-shelf position in those summers. SST effects on subsequent cloud cover were weaker and more variable among study summers, with rising SSTs explaining up to 21.6% of the increase in cloud cover three days later. This work quantifies the often observed cloud cooling effect on coral reefs. It highlights the importance of incorporating local-scale processes into bleaching forecasting models, and encourages the use of remote sensing imagery to value-add to coral bleaching field studies and to more accurately predict risks to coral reefs.

Advances in monitoring the human dimension of natural resource systems: an example from the Great Barrier Reef

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Marshall, N. A.; Bohensky, E.; Curnock, M.; Goldberg, J.; Gooch, M.; Nicotra, B.; Pert, P.; Scherl, L. M.; Stone-Jovicich, S.; Tobin, R. C.

2016-11-01

The aim of this paper is to demonstrate the feasibility and potential utility of decision-centric social-economic monitoring using data collected from Great Barrier Reef (Reef) region. The social and economic long term monitoring program (SELTMP) for the Reef is a novel attempt to monitor the social and economic dimensions of social-ecological change in a globally and nationally important region. It represents the current status and condition of the major user groups of the Reef with the potential to simultaneously consider trends, interconnections, conflicts, dependencies and vulnerabilities. Our approach was to combine a well-established conceptual framework with a strong governance structure and partnership arrangement that enabled the co-production of knowledge. The framework is a modification of the Millennium Ecosystem Assessment and it was used to guide indicator choice. Indicators were categorised as; (i) resource use and dependency, (ii) ecosystem benefits and well-being, and (iii) drivers of change. Data were collected through secondary datasets where existing and new datasets were created where not, using standard survey techniques. Here we present an overview of baseline results of new survey data from commercial-fishers (n = 210), marine-based tourism operators (n = 119), tourists (n = 2877), local residents (n = 3181), and other Australians (n = 2002). The indicators chosen describe both social and economic components of the Reef system and represent an unprecedented insight into the ways in which people currently use and depend on the Reef, the benefits that they derive, and how they perceive, value and relate to the Reef and each other. However, the success of a program such as the SELTMP can only occur with well-translated cutting-edge data and knowledge that are collaboratively produced, adaptive, and directly feeds into current management processes. We discuss how data from the SELTMP have already been incorporated into Reef management decision

Deposition of organic material in a coral reef lagoon, One Tree Island, Great Barrier Reef

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Koop, K.; Larkum, A. W. D.

1987-07-01

Deposition of organic material was measured at four sites on One Tree Island coral reef using fixed sediment traps. Although no reliable data were obtained for the reef crest area because of problems of resuspension, mean deposition in the backreef area amounted to some 4 g organic C m -2 day -1 whereas in the lagoon it was about 1·5 g C m -2 day -1. This amounted to mean nitrogen deposition rates of 160 and 95 mg N m -2 day -1, respectively. As primary production by turf algae, the principal producers at One Tree Island, has been estimated at about 2·3 g C m -2 day -1 for the whole reef system and the weighted mean carbon deposition is estimated at 2·2 g C m -2 day -1, it is clear that the carbon produced by plants is largely retained in the system. Nitrogen deposition, on the other hand, amounted to only about 60% of that produced by turf algae and it must be assumed that much of this leached into the water during sedimentation. Losses of nitrogen may be minimized by incorporation of dissolved nitrogen by pelagic microheterotrophs which may in turn be consumed by filter feeders before they leave the reef.

Early-phase dynamics in coral recovery following cyclone disturbance on the inshore Great Barrier Reef, Australia

Science.gov (United States)

Sato, Yui; Bell, Sara C.; Nichols, Cassandra; Fry, Kent; Menéndez, Patricia; Bourne, David G.

2018-06-01

Coral recovery (the restoration of abundance and composition of coral communities) after disturbance is a key process that determines the resilience of reef ecosystems. To understand the mechanisms underlying the recovery process of coral communities, colony abundance and size distribution were followed on reefs around Pelorus Island, located in the inshore central region of the Great Barrier Reef, following a severe tropical cyclone in 2011 that caused dramatic loss of coral communities. Permanent quadrats (600 m2) were monitored biannually between 2012 and 2016, and individual coral colonies were counted, sized and categorized into morphological types. The abundance of coral recruits and coral cover were also examined using permanent quadrats and random line intercept transects, respectively. The number of colonies in the smallest size class (4-10 cm) increased substantially during the study period, driving the recovery of coral populations. The total number of coral colonies 5 yr post-cyclone reached between 73 and 122% of pre-cyclone levels though coral cover remained between 16 and 31% of pre-cyclone levels, due to the dominance of small coral colonies in the recovering communities. Temporal transitions of coral demography (i.e., colony-size distributions) illustrated that the number of recently established coral populations overtook communities of surviving colonies. Coral recruits (coral recovery. A shift in morphological composition of coral communities was also observed, with the relative abundance of encrusting corals reduced post-cyclone in contrast to their dominance prior to the disturbance. This study identifies the fine-scale processes involved in the initial recovery of coral reefs, providing insights into the dynamics of coral demography that are essential for determining coral reef resilience following major disturbance.

The ecology of 'Acroporid white syndrome', a coral disease from the southern Great Barrier Reef.

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George Roff

Full Text Available Outbreaks of coral disease have increased worldwide over the last few decades. Despite this, remarkably little is known about the ecology of disease in the Indo-Pacific Region. Here we report the spatiotemporal dynamics of a coral disease termed 'Acroporid white syndrome' observed to affect tabular corals of the genus Acropora on the southern Great Barrier Reef. The syndrome is characterised by rapid tissue loss initiating in the basal margins of colonies, and manifests as a distinct lesion boundary between apparently healthy tissue and exposed white skeleton. Surveys of eight sites around Heron Reef in 2004 revealed a mean prevalence of 8.1±0.9%, affecting the three common species (Acropora cytherea, A. hyacinthus, A. clathrata and nine other tabular Acropora spp. While all sizes of colonies were affected, white syndrome disproportionately affected larger colonies of tabular Acroporids (>80 cm. The prevalence of white syndrome was strongly related to the abundance of tabular Acroporids within transects, yet the incidence of the syndrome appears unaffected by proximity to other colonies, suggesting that while white syndrome is density dependant, it does not exhibit a strongly aggregated spatial pattern consistent with previous coral disease outbreaks. Acroporid white syndrome was not transmitted by either direct contact in the field or by mucus in aquaria experiments. Monitoring of affected colonies revealed highly variable rates of tissue loss ranging from 0 to 1146 cm(-2 week(-1, amongst the highest documented for a coral disease. Contrary to previous links between temperature and coral disease, rates of tissue loss in affected colonies increased threefold during the winter months. Given the lack of spatial pattern and non-infectious nature of Acroporid white syndrome, further studies are needed to determine causal factors and longer-term implications of disease outbreaks on the Great Barrier Reef.

Excess seawater nutrients, enlarged algal symbiont densities and bleaching sensitive reef locations: 1. Identifying thresholds of concern for the Great Barrier Reef, Australia.

Science.gov (United States)

Wooldridge, Scott A

2016-05-23

Here, I contribute new insight into why excess seawater nutrients are an increasingly identified feature at reef locations that have low resistance to thermal stress. Specifically, I link this unfavourable synergism to the development of enlarged (suboptimal) zooxanthellae densities that paradoxically limit the capacity of the host coral to build tissue energy reserves needed to combat periods of stress. I explain how both theoretical predictions and field observations support the existence of species-specific 'optimal' zooxanthellae densities ~1.0-3.0×10 6 cellscm- 2 . For the central Great Barrier Reef (GBR), excess seawater nutrients that permit enlarged zooxanthellae densities beyond this optimum range are linked with seawater chlorophyll a>0.45μg·L -1 ; a eutrophication threshold previously shown to correlate with a significant loss in species for hard corals and phototrophic octocorals on the central GBR, and herein shown to correlate with enhanced bleaching sensitivity during the 1998 and 2002 mass bleaching events. Copyright © 2016 Elsevier Ltd. All rights reserved.

Soft coral abundance on the central Great Barrier Reef: effects of Acanthaster planci, space availability, and aspects of the physical environment

Science.gov (United States)

Fabricius, K. E.

1997-07-01

The distribution and abundance of soft coral genera on reefs of the central Great Barrier Reef was investigated in relation to reef position, recent history of disturbance, wave exposure, substratum slope and depth. Eighty-five 25 m long transects were surveyed at 10 m depth on windward sides of 14 mid- and outer-shelf reefs. A further 75 transects in different zones on one mid-shelf reef (Davies Reef) between 5 and 30 m depth were investigated. The crown-of-thorns starfish Acanthaster planci had caused large-scale mortality of scleractinians on eight of these reefs five to ten years prior to the study, and as a result, scleractinian cover was only 35-55% of that on the six unimpacted reefs. On the impacted reefs, stony corals with massive and encrusting growths form had smaller average colony diameters but similar or slightly lower numerical abundance. In contrast, mean colony size, cover and abundance of branching stony corals showed no difference between impacted and unimpacted reefs. Twenty-four genera of soft corals (in eight families) were recorded, and none showed different abundance or cover in areas of former A. planci impact, compared to unaffected sites. Similarly, no difference was detected among locations in the numbers or area cover of sponges, tunicates, zoanthids, Halimeda or other macro-algae. Mean soft coral cover was 2 to 5% at 10 m on sheltered mid-shelf reefs, and 12 to 17% on more current-exposed reefs. Highest cover and abundances generally occurred on platforms of outer-shelf reefs exposed to relatively strong currents but low wave energy. On Davies Reef, cover and colony numbers of the families Nephtheidae and Xeniidae were low within the zone of wave impact, in flow-protected bays and lagoons, on shaded steep slopes, and at depths above 10 and below 25 m. In contrast, distributions of genera of the family Alcyoniidae were not related to these physical parameters. The physical conditions of a large proportion of habitats appear "sub

Host-specific interactions with environmental factors shape the distribution of symbiodinium across the Great Barrier Reef.

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Linda Tonk

Full Text Available The endosymbiotic dinoflagellates (genus Symbiodinium within coral reef invertebrates are critical to the survival of the holobiont. The genetic variability of Symbiodinium may contribute to the tolerance of the symbiotic association to elevated sea surface temperatures (SST. To assess the importance of factors such as the local environment, host identity and biogeography in driving Symbiodinium distributions on reef-wide scales, data from studies on reef invertebrate-Symbiodinium associations from the Great Barrier Reef (GBR were compiled.The resulting database consisted of 3717 entries from 26 studies. It was used to explore ecological patterns such as host-specificity and environmental drivers structuring community complexity using a multi-scalar approach. The data was analyzed in several ways: (i frequently sampled host species were analyzed independently to investigate the influence of the environment on symbiont distributions, thereby excluding the influence of host specificity, (ii host species distributions across sites were added as an environmental variable to determine the contribution of host identity on symbiont distribution, and (iii data were pooled based on clade (broad genetic groups dividing the genus Symbiodinium to investigate factors driving Symbiodinium distributions using lower taxonomic resolution. The results indicated that host species identity plays a dominant role in determining the distribution of Symbiodinium and environmental variables shape distributions on a host species-specific level. SST derived variables (especially SSTstdev most often contributed to the selection of the best model. Clade level comparisons decreased the power of the predictive model indicating that it fails to incorporate the main drivers behind Symbiodinium distributions.Including the influence of different host species on Symbiodinium distributional patterns improves our understanding of the drivers behind the complexity of Symbiodinium

Diversity and Activity of Diazotrophs in Great Barrier Reef Surface Waters.

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Messer, Lauren F; Brown, Mark V; Furnas, Miles J; Carney, Richard L; McKinnon, A D; Seymour, Justin R

2017-01-01

Discrepancies between bioavailable nitrogen (N) concentrations and phytoplankton growth rates in the oligotrophic waters of the Great Barrier Reef (GBR) suggest that undetermined N sources must play a significant role in supporting primary productivity. One such source could be biological dinitrogen (N 2 ) fixation through the activity of "diazotrophic" bacterioplankton. Here, we investigated N 2 fixation and diazotroph community composition over 10° S of latitude within GBR surface waters. Qualitative N 2 fixation rates were found to be variable across the GBR but were relatively high in coastal, inner and outer GBR waters, reaching 68 nmol L -1 d -1 . Diazotroph assemblages, identified by amplicon sequencing of the nifH gene, were dominated by the cyanobacterium Trichodesmium erythraeum , γ-proteobacteria from the Gamma A clade, and δ-proteobacterial phylotypes related to sulfate-reducing genera. However, diazotroph communities exhibited significant spatial heterogeneity, correlated with shifts in dissolved inorganic nutrient concentrations. Specifically, heterotrophic diazotrophs generally increased in relative abundance with increasing concentrations of phosphate and N, while Trichodesmium was proportionally more abundant when concentrations of these nutrients were low. This study provides the first in-depth characterization of diazotroph community composition and N 2 fixation dynamics within the oligotrophic, N-limited surface waters of the GBR. Our observations highlight the need to re-evaluate N cycling dynamics within oligotrophic coral reef systems, to include diverse N 2 fixing assemblages as a potentially significant source of dissolved N within the water column.

A multi-criteria approach to Great Barrier Reef catchment (Queensland, Australia) diffuse-source pollution problem.

Science.gov (United States)

Greiner, R; Herr, A; Brodie, J; Haynes, D

2005-01-01

This paper presents a multi-criteria based tool for assessing the relative impact of diffuse-source pollution to the Great Barrier Reef (GBR) from the river basins draining into the GBR lagoon. The assessment integrates biophysical and ecological data of water quality and pollutant concentrations with socio-economic information pertaining to non-point source pollution and (potential) pollutant impact. The tool generates scores for each river basin against four criteria, thus profiling the basins and enabling prioritization of management alternatives between and within basins. The results support policy development for pollution control through community participation, scientific data integration and expert knowledge contributed by people from across the catchment. The results specifically provided support for the Reef Water Quality Protection Plan, released in October 2003. The aim of the plan is to provide a framework for reducing discharge of sediment, nutrient and other diffuse-source loads and (potential) impact of that discharge and for prioritising management actions both between and within river basins.

COLLABORATIVE GUIDE: A REEF MANAGER'S GUIDE TO ...

Science.gov (United States)

Innovative strategies to conserve the world's coral reefs are included in a new guide released today by NOAA, and the Australian Great Barrier Reef Marine Park Authority, with author contributions from a variety of international partners from government agencies, non-governmental organizations, and academic institutions. Referred to as A Reef Manager's Guide to Coral Bleaching, the guide will provide coral reef managers with the latest scientific information on the causes of coral bleaching and new management strategies for responding to this significant threat to coral reef ecosystems. Innovative strategies to conserve the world's coral reefs are included in a new guide released today by NOAA, and the Australian Great Barrier Reef Marine Park Authority, with author contributions from a variety of international partners from government agencies, non-governmental organizations, and academic institutions. Dr. Jordan West, of the National Center for Environmental Assessment, was a major contributor to the guide. Referred to as

SPATIAL HETEROGENEITY OF PHOTOSYNTHETIC ACTIVITY WITHIN DISEASED CORALS FROM THE GREAT BARRIER REEF

DEFF Research Database (Denmark)

Roff, George; Ulstrup, Karin Elizabeth; Fine, Maoz

2008-01-01

Morphological diagnosis and descriptions of seven disease-like syndromes affecting scleractinian corals were characterized from the southern Great Barrier Reef (GBR). Chl a fluorescence of PSII was measured using an Imaging-PAM (pulse amplitude modulated) fluorometer, enabling visualization...... with white patch syndrome appeared to impact primarily on the symbiotic dinoflagellates, as evidenced by declines in minimum fluorescence (F0) and maximum quantum yield (Fv/Fm), with no indication of degeneration in the host tissues. Our results suggest that for the majority of coral syndromes from the GBR......, pathogenesis occurs in the host tissue, while the impact on the zooxanthellae populations residing in affected corals is minimal....

A new gnathiid (Crustacea: Isopoda) parasitizing two species of requiem sharks from Lizard Island, Great Barrier Reef, Australia.

Science.gov (United States)

Coetzee, Maryke L; Smit, Nico J; Grutter, Alexandra S; Davies, Angela J

2008-06-01

Third-stage juveniles (praniza 3) of Gnathia grandilaris n. sp. were collected from the gill filaments and septa of 5 requiem sharks, including a white tip reef shark, Triaenodon obesus, and 4 grey reef sharks, Carcharhinus amblyrhynchos, at Lizard Island, Great Barrier Reef, Australia, in March 2002. Some juvenile gnathiids were then maintained in fresh sea water until they molted to adults. Adult males appeared 19 days following detachment of juveniles from host fishes, but no juveniles molted successfully into females. The current description is based, therefore, on bright field and scanning electron microscopy observations of adult males and third-stage juveniles. Unique features of the male include the triangular-shaped inferior medio-frontal process, 2 areolae on the dorsal surface of the pylopod, and a slender pleotelson (twice as long as wide) with lateral concavities. The third-stage juvenile has distinctive white pigmentation on the black pereon when alive, while the mandible has 9 triangular backwardly directed teeth. This species has the largest male and third-stage juvenile of any Gnathia spp. from Australia and of any gnathiid isopods associated with elasmobranchs.

Geographic and habitat partitioning of genetically distinct zooxanthellae (Symbiodinium) in Acropora corals on the Great Barrier Reef.

Science.gov (United States)

Ulstrup, K E; Van Oppen, M J H

2003-12-01

Intra- and intercolony diversity and distribution of zooxanthellae in acroporid corals is largely uncharted. In this study, two molecular methods were applied to determine the distribution of zooxanthellae in the branching corals Acropora tenuis and A. valida at several reef locations in the central section of the Great Barrier Reef. Sun-exposed and shaded parts of all colonies were examined. Single-stranded conformational polymorphism analysis showed that individual colonies of A. tenuis at two locations harbour two strains of Symbiodinium belonging to clade C (C1 and C2), whereas conspecific colonies at two other reefs harboured a single zooxanthella strain. A. valida was found to simultaneously harbour strains belonging to two distinct phylogenetic clades (C and D) at all locations sampled. A novel method with improved sensitivity (quantitative polymerase chain reaction using Taqman fluorogenic probes) was used to map the relative abundance distribution of the two zooxanthella clades. At two of the five sampling locations both coral species were collected. At these two locations, composition of the zooxanthella communities showed the same pattern in both coral species, i.e. correlation with ambient light in Pioneer Bay and an absence thereof in Nelly Bay. The results show that the distribution of genetically distinct zooxanthellae is correlated with light regime and possibly temperature in some (but not all) colonies of A. tenuis and A. valida and at some reef locations, which we interpret as acclimation to local environmental conditions.

A decadal analysis of bioeroding sponge cover on the inshore Great Barrier Reef.

Science.gov (United States)

Ramsby, Blake D; Hoogenboom, Mia O; Whalan, Steve; Webster, Nicole S; Thompson, Angus

2017-06-02

Decreasing coral cover on the Great Barrier Reef (GBR) may provide opportunities for rapid growth and expansion of other taxa. The bioeroding sponges Cliona spp. are strong competitors for space and may take advantage of coral bleaching, damage, and mortality. Benthic surveys of the inshore GBR (2005-2014) revealed that the percent cover of the most abundant bioeroding sponge species, Cliona orientalis, has not increased. However, considerable variation in C. orientalis cover, and change in cover over time, was evident between survey locations. We assessed whether biotic or environmental characteristics were associated with variation in C. orientalis distribution and abundance. The proportion of fine particles in the sediments was negatively associated with the presence-absence and the percent cover of C. orientalis, indicating that the sponge requires exposed habitat. The cover of corals and other sponges explained little variation in C. orientalis cover or distribution. The fastest increases in C. orientalis cover coincided with the lowest macroalgal cover and chlorophyll a concentration, highlighting the importance of macroalgal competition and local environmental conditions for this bioeroding sponge. Given the observed distribution and habitat preferences of C. orientalis, bioeroding sponges likely represent site-specific - rather than regional - threats to corals and reef accretion.

Diel coral reef acidification driven by porewater advection in permeable sands, Heron Island, Great Barrier Reef

DEFF Research Database (Denmark)

Santos, Isaac R.; Glud, Ronnie N.; Maher, Damien

2011-01-01

Little is known about how biogeochemical processes in permeable sediments affect the pH of coastal waters. We demonstrate that seawater recirculation in permeable sands can play a major role in proton (H+) cycling in a coral reef lagoon. The diel pH range (up to 0.75 units) in the Heron Island...... lagoon was the broadest ever reported for reef waters, and the night‐time pH (7.69) was comparable to worst‐case scenario predictions for seawater pH in 2100. The net contribution of coarse carbonate sands to the whole system H+ fluxes was only 9% during the day, but approached 100% at night when small...... scale (i.e., flow and topography‐induced pressure gradients) and large scale (i.e., tidal pumping as traced by radon) seawater recirculation processes were synergistic. Reef lagoon sands were a net sink for H+, and the sink strength was a function of porewater flushing rate. Our observations suggest...

A population genetic assessment of coral recovery on highly disturbed reefs of the Keppel Island archipelago in the southern Great Barrier Reef

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Madeleine J.H. van Oppen

2015-07-01

Full Text Available Coral reefs surrounding the islands lying close to the coast are unique to the Great Barrier Reef (GBR in that they are frequently exposed to disturbance events including floods caused by cyclonic rainfall, strong winds and occasional periods of prolonged above-average temperatures during summer. In one such group of islands in the southern GBR, the Keppel Island archipelago, climate-driven disturbances frequently result in major coral mortality. Whilst these island reefs have clearly survived such dramatic disturbances in the past, the consequences of extreme mortality events may include the loss of genetic diversity, and hence adaptive potential, and a reduction in fitness due to inbreeding, especially if new recruitment from external sources is limited. Here we examined the level of isolation of the Keppel Island group as well as patterns of gene flow within the Keppel Islands using 10 microsatellite markers in nine populations of the coral, Acropora millepora. Bayesian cluster analysis and assignment tests indicated gene flow is restricted, but not absent, between the outer and inner Keppel Island groups, and that extensive gene flow exists within each of these island groups. Comparison of the Keppel Island data with results from a previous GBR-wide study that included a single Keppel Island population, confirmed that A. millepora in the Keppel Islands is genetically distinct from populations elsewhere on the GBR, with exception of the nearby inshore High Peak Reef just north of the Keppel Islands. We compared patterns of genetic diversity in the Keppel Island populations with those from other GBR populations and found them to be slightly, but significantly lower, consistent with the archipelago being geographically isolated, but there was no evidence for recent bottlenecks or deviation from mutation-drift equilibrium. A high incidence of private alleles in the Keppel Islands, particularly in the outer islands, supports their relative

Organic biomarkers to describe the major carbon inputs and cycling of organic matter in the central Great Barrier Reef region

Science.gov (United States)

Burns, Kathryn; Brinkman, Diane

2011-06-01

Controversy surrounds the sources and transport of land derived pollutants in the Great Barrier Reef ecosystem because there is insufficient knowledge of the mechanism of movement of organic contaminants and the cycling of organic matter in this dynamic system. Thus a sediment and sediment trap study was used to describe the composition of resuspended and surface sediments in the south central Great Barrier Reef and its lagoon. This region is characterised by strong tides (6-8 m at Mackay) and trade winds regularly about 15-20 knots. A series of organic biomarkers detailed the cyclical processes of sediment resuspension, recolonising with marine algae and bacteria, packaging into zooplankton faecal pellets and resettlement to sediments where the organics undergo further diagenesis. With each cycle the inshore sediments are diluted with CaCO 3 reef sediments and moved further offshore with the strong ebb tide currents. This results in transport of land derived materials offshore and little storage of organic materials in the lagoon or reef sediments. These processes were detailed by inorganic measurements such as %CaCO 3 and Al/Ca ratios, and by the compositions of hydrocarbon, sterol, alcohol, and fatty acid lipid fractions. Persistent contaminants such as coal dust from a coastal loading facility can be detected in high concentration inshore and decreasing out to the shelf break at 180 m approximately 40 nautical miles offshore. The normal processes would likely be amplified during cyclonic and other storms. The lipids show the sources of carbon to include diatoms and other phytoplankton, creanaerchaeota, sulfate reducing and other bacteria, land plants including mangrove leaves, plus coal dust and other petroleum contaminants.

Coral reefs and eutrophication

International Nuclear Information System (INIS)

Stambler, N.

1999-01-01

Coral reefs are found in oligotrophic waters, which are poor in nutrients such as nitrogen, phosphate, and possibly iron. In spite of this, coral reefs exhibit high gross primary productivity rates. They thrive in oligotrophic conditions because of the symbiotic relationship between corals and dinoflagellate algae (zooxanthellae) embedded in the coral tissue. In their mutualistic symbiosis, the zooxanthellae contribute their photosynthetic capability as the basis for the metabolic energy of the whole association, and eventually of a great part of the entire reef ecosystem

Linking the Local and the Global. What Today’s Environmental Humanities Movement Can Learn from Their Predecessor’s Successful Leadership of the 1965–1975 War to Save the Great Barrier Reef

Directory of Open Access Journals (Sweden)

Iain McCalman

2017-10-01

Full Text Available For a decade from 1965–1975, an Australian poet, Judith Wright, and a Reef artist, John Busst, played a major role in helping to save the Great Barrier Reef. The Queensland State Government had declared its intention of mining up to eighty percent of the Reef’s corals for oil, gas, fertiliser and cement. The campaign of resistance led by these two humanists, in alliance with a forester, Dr. Len Webb, contributed substantively to the establishment of the Great Barrier Reef Marine Park in 1975 and to then to the Reef’s World Heritage listing in 1983 as ‘the most impressive marine environment in the world’. This paper explains the challenges facing today’s environmental scholars and activists as they attempt to replicate the success of their 1970s predecessors in helping to save the Great Barrier Reef from even graver and more immediate threats to its survival.

The Gulf of Carpentaria heated Torres Strait and the Northern Great Barrier Reef during the 2016 mass coral bleaching event

NARCIS (Netherlands)

Wolanski, E.; Andutta, Fernando P.; Deleersnijder, E.L.C.; Li, Y.; Thomas, C.J.

The 2015/16 ENSO event increased the temperature of waters surrounding northeast Australia to above 30 °C, with large patches of water reaching 32 °C, for over two months, which led to severe bleaching of corals of the Northern Great Barrier Reef (NGBR). This study provides evidence gained from

Assessing community values for reducing agricultural emissions to improve water quality and protect coral health in the Great Barrier Reef

Science.gov (United States)

Rolfe, John; Windle, Jill

2011-12-01

Policymakers wanting to increase protection of the Great Barrier Reef from pollutants generated by agriculture need to identify when measures to improve water quality generate benefits to society that outweigh the costs involved. The research reported in this paper makes a contribution in several ways. First, it uses the improved science understanding about the links between management changes and reef health to bring together the analysis of costs and benefits of marginal changes, helping to demonstrate the appropriate way of addressing policy questions relating to reef protection. Second, it uses the scientific relationships to frame a choice experiment to value the benefits of improved reef health, with the results of mixed logit (random parameter) models linking improvements explicitly to changes in "water quality units." Third, the research demonstrates how protection values are consistent across a broader population, with some limited evidence of distance effects. Fourth, the information on marginal costs and benefits that are reported provide policymakers with information to help improve management decisions. The results indicate that while there is potential for water quality improvements to generate net benefits, high cost water quality improvements are generally uneconomic. A major policy implication is that cost thresholds for key pollutants should be set to avoid more expensive water quality proposals being selected.

A method for risk analysis across governance systems: a Great Barrier Reef case study

International Nuclear Information System (INIS)

Dale, Allan; Vella, Karen; Potts, Ruth; Pressey, Robert L; Brodie, Jon; Yorkston, Hugh

2013-01-01

Healthy governance systems are key to delivering sound environmental management outcomes from global to local scales. There are, however, surprisingly few risk assessment methods that can pinpoint those domains and sub-domains within governance systems that are most likely to influence good environmental outcomes at any particular scale, or those if absent or dysfunctional, most likely to prevent effective environmental management. This paper proposes a new risk assessment method for analysing governance systems. This method is then tested through its preliminary application to a significant real-world context: governance as it relates to the health of Australia’s Great Barrier Reef (GBR). The GBR exists at a supra-regional scale along most of the north eastern coast of Australia. Brodie et al (2012 Mar. Pollut. Bull. 65 81–100) have recently reviewed the state and trend of the health of the GBR, finding that overall trends remain of significant concern. At the same time, official international concern over the governance of the reef has recently been signalled globally by the International Union for the Conservation of Nature (IUCN). These environmental and political contexts make the GBR an ideal candidate for use in testing and reviewing the application of improved tools for governance risk assessment. (letter)

Origins and Implications of a Primary Crown-of-Thorns Starfish Outbreak in the Southern Great Barrier Reef

Directory of Open Access Journals (Sweden)

Ian Miller

2015-01-01

Full Text Available The crown-of-thorns starfish (COTS is a major predator of hard corals. Repeated COTS outbreaks in the Cairns and Central sections of the Great Barrier Reef (GBR have been responsible for greater declines in coral cover than any other type of disturbance, including cyclones, disease, and coral bleaching. Knowledge of the precise timing and location of primary outbreaks could reveal the initial drivers of outbreaks and so could indicate possible management measures. In the central GBR, COTS outbreaks appear to follow major flooding events, but despite many years of observations, no primary outbreak has ever been unequivocally identified in the central and northern GBR. Here we locate a primary outbreak of COTS on the southern GBR which is not correlated with flooding. Instead it appears to have been the result of a combination of life history traits of COTS and prevailing oceanographic conditions. The hydrodynamic setting implies that the outbreak could disperse larvae to other reefs in the region.

Regional-scale variation in the distribution and abundance of farming damselfishes on Australia's Great Barrier Reef

KAUST Repository

Emslie, Michael J.; Logan, Murray; Ceccarelli, Daniela M.; Cheal, Alistair J.; Hoey, Andrew; Miller, Ian R.; Sweatman, Hugh P A

2012-01-01

Territorial damselfishes that manipulate ("farm") the algae in their territories can have a marked effect on benthic community structure and may influence coral recovery following disturbances. Despite the numerical dominance of farming species on many reefs, the importance of their grazing activities is often overlooked, with most studies only examining their roles over restricted spatial and temporal scales. We used the results of field surveys covering 9.5° of latitude of the Great Barrier Reef to describe the distribution, abundance and temporal dynamics of farmer communities. Redundancy analysis revealed unique subregional assemblages of farming species that were shaped by the combined effects of shelf position and, to a lesser extent, by latitude. These spatial patterns were largely stable through time, except when major disturbances altered the benthic community. Such disturbances affected the functional guilds of farmers in different ways. Since different guilds of farmers modify benthic community structure and affect survival of juvenile corals in different ways, these results have important implications for coral recovery following disturbances. © 2012 Springer-Verlag.

Regional-scale variation in the distribution and abundance of farming damselfishes on Australia's Great Barrier Reef

KAUST Repository

Emslie, Michael J.

2012-03-15

Territorial damselfishes that manipulate ("farm") the algae in their territories can have a marked effect on benthic community structure and may influence coral recovery following disturbances. Despite the numerical dominance of farming species on many reefs, the importance of their grazing activities is often overlooked, with most studies only examining their roles over restricted spatial and temporal scales. We used the results of field surveys covering 9.5° of latitude of the Great Barrier Reef to describe the distribution, abundance and temporal dynamics of farmer communities. Redundancy analysis revealed unique subregional assemblages of farming species that were shaped by the combined effects of shelf position and, to a lesser extent, by latitude. These spatial patterns were largely stable through time, except when major disturbances altered the benthic community. Such disturbances affected the functional guilds of farmers in different ways. Since different guilds of farmers modify benthic community structure and affect survival of juvenile corals in different ways, these results have important implications for coral recovery following disturbances. © 2012 Springer-Verlag.

RESEARCH: Influence of Social, Biophysical, and Managerial Conditions on Tourism Experiences Within the Great Barrier Reef World Heritage Area.

Science.gov (United States)

Shafer; Inglis

2000-07-01

/ Managing protected areas involves balancing the enjoyment of visitors with the protection of a variety of cultural and biophysical resources. Tourism pressures in the Great Barrier Reef World Heritage Area (GBRWHA) are creating concerns about how to strike this balance in a marine environment. Terrestrial-based research has led to conceptual planning and management frameworks that address issues of human use and resource protection. The limits of acceptable change (LAC) framework was used as a conceptual basis for a study of snorkeling at reef sites in the GBRWHA. The intent was to determine if different settings existed among tourism operators traveling to the reef and, if so, to identify specific conditions relating to those settings. Snorkelers (N = 1475) traveling with tourism operations of different sizes who traveled to different sites completed surveys. Results indicated that snorkelers who traveled with larger operations (more people and infrastructure) differed from those traveling with smaller operations (few people and little on-site infrastructure) on benefits received and in the way that specific conditions influenced their enjoyment. Benefits related to nature, escape, and family helped to define reef experiences. Conditions related to coral, fish, and operator staff had a positive influence on the enjoyment of most visitors but, number of people on the trip and site infrastructure may have the greatest potential as setting indicators. Data support the potential usefulness of visitor input in applying the LAC concept to a marine environment where tourism and recreational uses are rapidly changing.

Reef odor: a wake up call for navigation in reef fish larvae.

Directory of Open Access Journals (Sweden)

Claire B Paris

Full Text Available The behavior of reef fish larvae, equipped with a complex toolbox of sensory apparatus, has become a central issue in understanding their transport in the ocean. In this study pelagic reef fish larvae were monitored using an unmanned open-ocean tracking device, the drifting in-situ chamber (DISC, deployed sequentially in oceanic waters and in reef-born odor plumes propagating offshore with the ebb flow. A total of 83 larvae of two taxonomic groups of the families Pomacentridae and Apogonidae were observed in the two water masses around One Tree Island, southern Great Barrier Reef. The study provides the first in-situ evidence that pelagic reef fish larvae discriminate reef odor and respond by changing their swimming speed and direction. It concludes that reef fish larvae smell the presence of coral reefs from several kilometers offshore and this odor is a primary component of their navigational system and activates other directional sensory cues. The two families expressed differences in their response that could be adapted to maintain a position close to the reef. In particular, damselfish larvae embedded in the odor plume detected the location of the reef crest and swam westward and parallel to shore on both sides of the island. This study underlines the critical importance of in situ Lagrangian observations to provide unique information on larval fish behavioral decisions. From an ecological perspective the central role of olfactory signals in marine population connectivity raises concerns about the effects of pollution and acidification of oceans, which can alter chemical cues and olfactory responses.

Sensitivity of coral cays to climatic variations, southern Great Barrier Reef, Australia

Energy Technology Data Exchange (ETDEWEB)

Flood, P G

1986-01-01

Analysis of available wind data for the years 1962-80 from Heron Island which is located within the southern Great Barrier Reef indicates that the annual wind energy vector has oscillated within a 45 degree arc from the SSE in the early 1960's to ESE in the late 1970's. Such changes in wind direction influence the direction of propagation of the waves which mold the shape of coral sand cays in this region. Documentation is provided which shows that the variability of the shoreline positions on Erskine Island, an uninhabited vegetated sand cays reflects this change. The implication is that contemporary shoreline erosion on Heron Island is not caused by the development associated with the tourist resort there. It is a symptom of the change in the propagation direction of the wind-induced waves which is related to long-term climatic change.

Understanding Biophysical Interactions In The Great Barrier Reef Catchments: Better Landscape Management For Water Quality Outcomes

Science.gov (United States)

Bui, E. N.; Wilkinson, S. N.; Bartley, R.

2014-12-01

Sediment input to the Great Barrier Reef (GBR) lagoon has had deleterious impacts on seagrass and coral ecosystems. The response of the Australian government has been to develop policies to: (i) reverse the impact of threats from sediments and nutrients, and improve water quality and aquatic health of the GBR lagoon; and (ii) to facilitate the uptake of sustainable farming and land management practices that deliver improved ecosystem services, by at least 30 per cent of farmers. The Reef2050 Long term sustainability plan aims to identify priority locations for on-ground investment of remediation options that will result in a reduction of constituent loads to the GBR. Recent sediment tracing studies indicate that subsoil from erosion features such as gullies and channel banks are the dominant contributors of sediment in the GBR catchments. Better control of gully and streambank erosion and restoration of riparian habitats are therefore necessary. Here we review the evidence for bank erosion in the GBR catchments and how scientific evidence on feedback relationships between climate- geochemistry-vegetation-landforms can be used to develop better guidelines for streambank and gully re-vegetation.

The importance of coastal altimetry retracking and detiding: A case study around the Great Barrier Reef, Australia

DEFF Research Database (Denmark)

Idris, Nurul H.; Deng, Xiaoli; Andersen, Ole Baltazar

2014-01-01

, fuzzy-retracked SLAs become available within 5 km of the coast; meanwhile it becomes more important to use pointwise tide modelling rather than state-of-the-art global tidal models, as the latter leave residual ocean tide signals in retracked SLAs. These improvements are demonstrated for Jason-2...... waveforms in the area of the Great Barrier Reef, Australia. Comparing the retrieved SLAs with in situ tide gauge data from Townsville and Bundaberg stations showed that the SLAs from this study generally outperform those from conventional methods, demonstrating that adequate waveform retracking and detiding...

Microsatellites Reveal Genetic Homogeneity among Outbreak Populations of Crown-of-Thorns Starfish (Acanthaster cf. solaris) on Australia’s Great Barrier Reef

KAUST Repository

Harrison, Hugo

2017-03-10

Specific patterns in the initiation and spread of reef-wide outbreaks of crown-of-thorns starfish are important, both to understand potential causes (or triggers) of outbreaks and to develop more effective and highly targeted management and containment responses. Using analyses of genetic diversity and structure (based on 17 microsatellite loci), this study attempted to resolve the specific origin for recent outbreaks of crown-of-thorns on Australia’s Great Barrier Reef (GBR). We assessed the genetic structure amongst 2705 starfish collected from 13 coral reefs in four regions that spanned ~1000 km of the GBR. Our results indicate that populations sampled across the full length of the GBR are genetically homogeneous (G’ST = −0.001; p = 0.948) with no apparent genetic structure between regions. Approximate Bayesian computational analyses suggest that all sampled populations had a common origin and that current outbreaking populations of crown-of-thorns starfish (CoTS) in the Swains are not independent of outbreak populations in the northern GBR. Despite hierarchical sampling and large numbers of CoTS genotyped from individual reefs and regions, limited genetic structure meant we were unable to determine a putative source population for the current outbreak of CoTS on the GBR. The very high genetic homogeneity of sampled populations and limited evidence of inbreeding indicate rapid expansion in population size from multiple, undifferentiated latent populations.

Microsatellites Reveal Genetic Homogeneity among Outbreak Populations of Crown-of-Thorns Starfish (Acanthaster cf. solaris) on Australia’s Great Barrier Reef

KAUST Repository

Harrison, Hugo; Pratchett, Morgan; Messmer, Vanessa; Saenz-Agudelo, Pablo; Berumen, Michael L.

2017-01-01

Specific patterns in the initiation and spread of reef-wide outbreaks of crown-of-thorns starfish are important, both to understand potential causes (or triggers) of outbreaks and to develop more effective and highly targeted management and containment responses. Using analyses of genetic diversity and structure (based on 17 microsatellite loci), this study attempted to resolve the specific origin for recent outbreaks of crown-of-thorns on Australia’s Great Barrier Reef (GBR). We assessed the genetic structure amongst 2705 starfish collected from 13 coral reefs in four regions that spanned ~1000 km of the GBR. Our results indicate that populations sampled across the full length of the GBR are genetically homogeneous (G’ST = −0.001; p = 0.948) with no apparent genetic structure between regions. Approximate Bayesian computational analyses suggest that all sampled populations had a common origin and that current outbreaking populations of crown-of-thorns starfish (CoTS) in the Swains are not independent of outbreak populations in the northern GBR. Despite hierarchical sampling and large numbers of CoTS genotyped from individual reefs and regions, limited genetic structure meant we were unable to determine a putative source population for the current outbreak of CoTS on the GBR. The very high genetic homogeneity of sampled populations and limited evidence of inbreeding indicate rapid expansion in population size from multiple, undifferentiated latent populations.

CaCO3 dissolution by holothurians (sea cucumber): a case study from One Tree Reef, Great Barrier Reef

Science.gov (United States)

Schneider, K.; Silverman, J.; Kravitz, B.; Woolsey, E.; Eriksson, H.; Schneider-Mor, A.; Barbosa, S.; Rivlin, T.; Byrne, M.; Caldeira, K.

2012-12-01

Holothurians (sea cucumbers) are among the largest and most important deposit feeder in coral reefs. They play a role in nutrient and CaCO3 cycling within the reef structure. As a result of their digestive process they secrete alkalinity due to CaCO3 dissolution and organic matter degradation forming CO2 and ammonium. In a survey at station DK13 on One Three Reef we found that the population density of holothurians was > 1 individual m-2. The dominant sea cucumber species Holothuria leucospilota was collected from DK13. The increase in alkalinity due to CaCO3 dissolution in aquaria incubations was measured to be 47±7 μmol kg-1 in average per individual. Combining this dissolution rate with the sea cucumbers concentrations at DK13 suggest that they may account for a dissolution rate of 34.9±17.8 mmol m-2 day-1, which is equivalent to about half of night time community dissolution measured in DK13. This indicates that in reefs where the sea cucumber population is healthy and protected from fishing they can be locally important in the CaCO3 cycle. Preliminary result suggests that the CaCO3 dissolution rates are not affected by the chemistry of the sea water they are incubated in. Measurements of the empty digestive track volume of two sea cucumbers H. atra and Stichopus herrmanni were 36 ± 4 ml and 151 ± 14 ml, respectively. Based on these measurements it is estimated that these species process 19 ± 2kg and 80 ± 7kg CaCO3 sand yr-1 per individual, respectively. The annual dissolution rates of H. atra and S. herrmanni are 6.5±1.9g and 9.6±1.4g, respectively, suggest that 0.05±0.02% and 0.1±0.02% of the CaCO3 processed through their gut annually is dissolved. During the incubations the CaCO3 dissolution was 0.07±0.01%, 0.04±0.01% and 0.21±0.05% of the fecal casts for H. atra, H. leucospilota and S. herrmanni, respectively. Our result that the primary parameter determining the CaCO3 dissolution by sea cucumber is the amount of carbonate send in their gut

U-Th dating reveals regional-scale decline of branching Acropora corals on the Great Barrier Reef over the past century

Science.gov (United States)

Clark, Tara R.; Roff, George; Zhao, Jian-xin; Feng, Yue-xing; Done, Terence J.; McCook, Laurence J.; Pandolfi, John M.

2017-09-01

Hard coral cover on the Great Barrier Reef (GBR) is on a trajectory of decline. However, little is known about past coral mortality before the advent of long-term monitoring (circa 1980s). Using paleoecological analysis and high-precision uranium-thorium (U-Th) dating, we reveal an extensive loss of branching Acropora corals and changes in coral community structure in the Palm Islands region of the central GBR over the past century. In 2008, dead coral assemblages were dominated by large, branching Acropora and living coral assemblages by genera typically found in turbid inshore environments. The timing of Acropora mortality was found to be occasionally synchronous among reefs and frequently linked to discrete disturbance events, occurring in the 1920s to 1960s and again in the 1980s to 1990s. Surveys conducted in 2014 revealed low Acropora cover (shifted baseline.

Interactions between a Trawl fishery and spatial closures for biodiversity conservation in the Great Barrier Reef World Heritage Area, Australia.

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Alana Grech

Full Text Available BACKGROUND: The Queensland East Coast Otter Trawl Fishery (ECOTF for penaeid shrimp fishes within Australia's Great Barrier Reef World Heritage Area (GBRWHA. The past decade has seen the implementation of conservation and fisheries management strategies to reduce the impact of the ECOTF on the seabed and improve biodiversity conservation. New information from electronic vessel location monitoring systems (VMS provides an opportunity to review the interactions between the ECOTF and spatial closures for biodiversity conservation. METHODOLOGY AND RESULTS: We used fishing metrics and spatial information on the distribution of closures and modelled VMS data in a geographical information system (GIS to assess change in effort of the trawl fishery from 2001-2009 and to quantify the exposure of 70 reef, non-reef and deep water bioregions to trawl fishing. The number of trawlers and the number of days fished almost halved between 2001 and 2009 and new spatial closures introduced in 2004 reduced the area zoned available for trawl fishing by 33%. However, we found that there was only a relatively minor change in the spatial footprint of the fishery as a result of new spatial closures. Non-reef bioregions benefited the most from new spatial closures followed by deep and reef bioregions. CONCLUSIONS/SIGNIFICANCE: Although the catch of non target species remains an issue of concern for fisheries management, the small spatial footprint of the ECOTF relative to the size of the GBRWHA means that the impact on benthic habitats is likely to be negligible. The decline in effort as a result of fishing industry structural adjustment, increasing variable costs and business decisions of fishers is likely to continue a trend to fish only in the most productive areas. This will provide protection for most benthic habitats without any further legislative or management intervention.

Variation in the health and biochemical condition of the coral Acropora tenuis along two water quality gradients on the Great Barrier Reef, Australia.

Science.gov (United States)

Rocker, Melissa M; Francis, David S; Fabricius, Katharina E; Willis, Bette L; Bay, Line K

2017-06-30

This study explores how plasticity in biochemical attributes, used as indicators of health and condition, enables the coral Acropora tenuis to respond to differing water quality regimes in inshore regions of the Great Barrier Reef. Health attributes were monitored along a strong and weak water quality gradient, each with three reefs at increasing distances from a major river source. Attributes differed significantly only along the strong gradient; corals grew fastest, had the least dense skeletons, highest symbiont densities and highest lipid concentrations closest to the river mouth, where water quality was poorest. High nutrient and particulate loads were only detrimental to skeletal density, which decreased as linear extension increased, highlighting a trade-off. Our study underscores the importance of assessing multiple health attributes in coral reef monitoring. For example, autotrophic indices are poor indicators of coral health and condition, but improve when combined with attributes like lipid content and biomass. Copyright © 2017 Elsevier Ltd. All rights reserved.

Stars, Manuscripts, and Astrolabes-The Stellar Constellations in a Group of Medieval Manuscripts between Latin Literature and a New Science of the Stars

Science.gov (United States)

Metzger, W.

2011-06-01

The European Middle Ages inherited star names and constellations from Roman antiquity, mostly via Latin literary texts. When, from the 11th century onwards, Arabic texts and instruments became available, figures and vocabulary at first where not compatible with this tradition. The example of an excerpt from Pseudo-Hyginus De Astronomia shows, how a Roman text on the constellations was revised and supplemented with the names of the astrolabe-stars to combine the two different traditions.

Widespread hybridization and bidirectional introgression in sympatric species of coral reef fish

KAUST Repository

Harrison, Hugo B.; Berumen, Michael L.; Saenz-Agudelo, Pablo; Salas, Eva; Williamson, David H.; Jones, Geoffrey P.

2017-01-01

interspecific hybrids from a collection of 2,991 coral trout sampled in inshore and mid-shelf reefs of the southern Great Barrier Reef. Hybrids were ubiquitous among reefs, fertile and spanned multiple generations suggesting both ecological and evolutionary

Coralline reefs classification in Banco Chinchorro, Mexico

Science.gov (United States)

Contreras-Silva, Ameris I.; López-Caloca, Alejandra A.

2009-09-01

The coralline reefs in Banco Chinchorro, Mexico, are part of the great reef belt of the western Atlantic. This reef complex is formed by an extensive coralline structure with great biological richness and diversity of species. These colonies are considered highly valuable ecologically, economically, socially and culturally, and they also inherently provide biological services. Fishing and scuba diving have been the main economic activities in this area for decades. However, in recent years, there has been a bleaching process and a decrease of the coral colonies in Quintana Roo, Mexico. This drop is caused mainly by the production activities performed in the oil platforms and the presence of hurricanes among other climatic events. The deterioration of the reef system can be analyzed synoptically using remote sensing. Thanks to this type of analysis, it is possible to have updated information of the reef conditions. In this paper, satellite imagery in Landsat TM and SPOT 5 is applied in the coralline reefs classification in the 1980- 2006 time period. Thus, an integral analysis of the optical components of the water surrounding the coralline reefs, such as on phytoplankton, sediments, yellow substance and even on the same water adjacent to the coral colonies, is performed. The use of a texture algorithm (Markov Random Field) was a key tool for their identification. This algorithm, does not limit itself to image segmentation, but also works on edge detection. In future work the multitemporal analysis of the results will determine the deterioration degree of these habitats and the conservation status of the coralline areas.

Utility of Photochemical Traits as Diagnostics of Thermal Tolerance amongst Great Barrier Reef Corals

Directory of Open Access Journals (Sweden)

Matthew R. Nitschke

2018-02-01

Full Text Available Light availability is considered a key factor regulating the thermal sensitivity of reef building corals, where excessive excitation of photosystem II (PSII further exacerbates pressure on photochemical pathways already compromised by heat stress. Coral symbionts acclimate to changes in light availability (photoacclimation by continually fine-tuning the photochemical operating efficiency of PSII. However, how this process adjusts throughout the warmest months in naturally heat-tolerant or sensitive species is unknown, and whether this influences the capacity to tolerate transient heat stress is untested. We therefore examined the PSII photophysiology of 10 coral species (with known thermal tolerances from shallow reef environments at Heron Island (Great Barrier Reef, Australia, in spring (October-November, 2015 vs. summer (February-March, 2016. Corals were maintained in flow-through aquaria and rapid light curve (RLC protocols using pulse amplitude modulated (PAM fluorometry captured changes in the PSII photoacclimation strategy, characterized as the minimum saturating irradiance (Ek, and the extent of photochemical ([1 – C], operating efficiency vs. non-photochemical ([1 – Q] energy dissipation. Values of Ek across species were >2-fold higher in all coral species in spring, consistent with a climate of higher overall light exposure (i.e., higher PAR from lower cloud cover, rainfall and wind speed compared with summer. Summer decreases in Ek were combined with a shift toward preferential photochemical quenching in all species. All coral species were subsequently subjected to thermal stress assays. An equivalent temperature-ramping profile of 1°C increase per day and then maintenance at 32°C was applied in each season. Despite the significant seasonal photoacclimation, the species hierarchy of thermal tolerance [maximum quantum yields of PSII (Fv/Fm, monitored at dawn and dusk] did not shift between seasons, except for Pocillopora

Coral identity underpins architectural complexity on Caribbean reefs.

Science.gov (United States)

Alvarez-Filip, Lorenzo; Dulvy, Nicholas K; Côte, Isabelle M; Watkinson, Andrew R; Gill, Jennifer A

2011-09-01

The architectural complexity of ecosystems can greatly influence their capacity to support biodiversity and deliver ecosystem services. Understanding the components underlying this complexity can aid the development of effective strategies for ecosystem conservation. Caribbean coral reefs support and protect millions of livelihoods, but recent anthropogenic change is shifting communities toward reefs dominated by stress-resistant coral species, which are often less architecturally complex. With the regionwide decline in reef fish abundance, it is becoming increasingly important to understand changes in coral reef community structure and function. We quantify the influence of coral composition, diversity, and morpho-functional traits on the architectural complexity of reefs across 91 sites at Cozumel, Mexico. Although reef architectural complexity increases with coral cover and species richness, it is highest on sites that are low in taxonomic evenness and dominated by morpho-functionally important, reef-building coral genera, particularly Montastraea. Sites with similar coral community composition also tend to occur on reefs with very similar architectural complexity, suggesting that reef structure tends to be determined by the same key species across sites. Our findings provide support for prioritizing and protecting particular reef types, especially those dominated by key reef-building corals, in order to enhance reef complexity.

Ecosystem health of the Great Barrier Reef: Time for effective management action based on evidence

Science.gov (United States)

Brodie, Jon; Pearson, Richard G.

2016-12-01

The Great Barrier Reef (GBR) is a World Heritage site off the north-eastern coast of Australia. The GBR is worth A 15-20 billion/year to the Australian economy and provides approximately 64,000 full time jobs. Many of the species and ecosystems of the GBR are in poor condition and continue to decline. The principal causes of the decline are catchment pollutant runoff associated with agricultural and urban land uses, climate change impacts and the effects of fishing. Many important ecosystems of the GBR region are not included inside the boundaries of the World Heritage Area. The current management regime for catchment pollutant runoff and climate change is clearly inadequate to prevent further decline. We propose a refocus of management on a "Greater GBR" (containing not only the major ecosystems and species of the GBR, but also its catchment) and on a set of management actions to halt the decline of the GBR. Proposed actions include: (1) Strengthen management in the areas of the Greater GBR where ecosystems are in good condition, with Torres Strait, northern Cape York and Hervey Bay being the systems with highest current integrity; (2) Investigate methods of cross-boundary management to achieve simultaneous cost-effective terrestrial, freshwater and marine ecosystem protection in the Greater GBR; (3) Develop a detailed, comprehensive, costed water quality management plan for the Greater GBR; (4) Use the Great Barrier Reef Marine Park Act and the Environment Protection and Biodiversity Conservation Act to regulate catchment activities that lead to damage to the Greater GBR, in conjunction with the relevant Queensland legislation; (5) Fund catchment and coastal management to the required level to solve pollution issues for the Greater GBR by 2025, before climate change impacts on Greater GBR ecosystems become overwhelming; (6) Continue enforcement of the zoning plan; (7) Australia to show commitment to protecting the Greater GBR through greenhouse gas emissions

Fishing down the largest coral reef fish species.

Science.gov (United States)

Fenner, Douglas

2014-07-15

Studies on remote, uninhabited, near-pristine reefs have revealed surprisingly large populations of large reef fish. Locations such as the northwestern Hawaiian Islands, northern Marianas Islands, Line Islands, U.S. remote Pacific Islands, Cocos-Keeling Atoll and Chagos archipelago have much higher reef fish biomass than islands and reefs near people. Much of the high biomass of most remote reef fish communities lies in the largest species, such as sharks, bumphead parrots, giant trevally, and humphead wrasse. Some, such as sharks and giant trevally, are apex predators, but others such as bumphead parrots and humphead wrasse, are not. At many locations, decreases in large reef fish species have been attributed to fishing. Fishing is well known to remove the largest fish first, and a quantitative measure of vulnerability to fishing indicates that large reef fish species are much more vulnerable to fishing than small fish. The removal of large reef fish by fishing parallels the extinction of terrestrial megafauna by early humans. However large reef fish have great value for various ecological roles and for reef tourism. Copyright © 2014 Elsevier Ltd. All rights reserved.

Water use benefit index as a tool for community-based monitoring of water related trends in the Great Barrier Reef region

Science.gov (United States)

Smajgl, A.; Larson, S.; Hug, B.; De Freitas, D. M.

2010-12-01

SummaryThis paper presents a tool for documenting and monitoring water use benefits in the Great Barrier Reef catchments that allows temporal and spatial comparison along the region. Water, water use benefits and water allocations are currently receiving much attention from Australian policy makers and conservation practitioners. Because of the inherent complexity and variability in water quality, it is essential that scientific information is presented in a meaningful way to policy makers, managers and ultimately, to the general public who have to live with the consequences of the decisions. We developed an inexpensively populated and easily understandable water use benefit index as a tool for community-based monitoring of water related trends in the Great Barrier Reef region. The index is developed based on a comparative list of selected water-related indices integrating attributes across physico-chemical, economic, social, and ecological domains currently used in the assessment of water quality, water quantity and water use benefits in Australia. Our findings indicate that the proposed index allows the identification of water performance indicators by temporal and spatial comparisons. Benefits for decision makers and conservation practitioners include a flexible way of prioritization towards the domain with highest concern. The broader community benefits from a comprehensive and user-friendly tool, communicating changes in water quality trends more effectively.

Flood impacts in Keppel Bay, southern great barrier reef in the aftermath of cyclonic rainfall.

Directory of Open Access Journals (Sweden)

Alison M Jones

Full Text Available In December 2010, the highest recorded Queensland rainfall associated with Tropical Cyclone 'Tasha' caused flooding of the Fitzroy River in Queensland, Australia. A massive flood plume inundated coral reefs lying 12 km offshore of the Central Queensland coast near Yeppoon and caused 40-100% mortality to coral fringing many of the islands of Keppel Bay down to a depth of ∼8 m. The severity of coral mortality was influenced by the level of exposure to low salinity seawater as a result of the reef's distance from the flood plume and to a lesser extent, water depth and whether or not the reef faced the plume source. There was no evidence in this study of mortality resulting from pollutants derived from the nearby Fitzroy Catchment, at least in the short term, suggesting that during a major flood, the impact of low salinity on corals outweighs that of pollutants. Recovery of the reefs in Keppel Bay from the 2010/2011 Fitzroy River flood is likely to take 10-15 years based on historical recovery periods from a similar event in 1991; potentially impacting visitor numbers for tourism and recreational usage. In the meantime, activities like snorkeling, diving and coral viewing will be focused on the few shallow reefs that survived the flood, placing even further pressure on their recovery. Reef regeneration, restoration and rehabilitation are measures that may be needed to support tourism in the short term. However, predictions of a warming climate, lower rainfall and higher intensity summer rain events in the Central and Coastal regions of Australia over the next decade, combined with the current anthropogenic influences on water quality, are likely to slow regeneration with consequent impact on long-term reef resilience.

The Gulf of Carpentaria heated Torres Strait and the Northern Great Barrier Reef during the 2016 mass coral bleaching event

Science.gov (United States)

Wolanski, E.; Andutta, F.; Deleersnijder, E.; Li, Y.; Thomas, C. J.

2017-07-01

The 2015/16 ENSO event increased the temperature of waters surrounding northeast Australia to above 30 °C, with large patches of water reaching 32 °C, for over two months, which led to severe bleaching of corals of the Northern Great Barrier Reef (NGBR). This study provides evidence gained from remote-sensing data, oceanographic data and oceanographic modeling, that three factors caused this excessive heating, namely: 1) the shutdown of the North Queensland Coastal Current, which would otherwise have flushed and cooled the Northern Coral Sea and the NGBR through tidal mixing 2) the advection of warm (>30 °C) water from the Gulf of Carpentaria eastward through Torres Strait and then southward over the NGBR continental shelf, and 3) presumably local solar heating. The eastward flux of this warm water through Torres Strait was driven by a mean sea level difference on either side of the strait that in turn was controlled by the wind, which also generated the southward advection of this warm water onto the NGBR shelf. On the NGBR shelf, the residence time of this warm water was longer inshore than offshore, and this may explain the observed cross-shelf gradient of coral bleaching intensity. The fate of the Great Barrier Reef is thus controlled by the oceanography of surrounding seas.

Hurricanes, coral reefs and rainforests: resistance, ruin and recovery in the Caribbean

Science.gov (United States)

Lugo, Ariel E.; Rogers, Caroline S.; Nixon, Scott W.

2000-01-01

The coexistence of hurricanes, coral reefs, and rainforests in the Caribbean demonstrates that highly structured ecosystems with great diversity can flourish in spite of recurring exposure to intense destructive energy. Coral reefs develop in response to wave energy and resist hurricanes largely by virtue of their structural strength. Limited fetch also protects some reefs from fully developed hurricane waves. While storms may produce dramatic local reef damage, they appear to have little impact on the ability of coral reefs to provide food or habitat for fish and other animals. Rainforests experience an enormous increase in wind energy during hurricanes with dramatic structural changes in the vegetation. The resulting changes in forest microclimate are larger than those on reefs and the loss of fruit, leaves, cover, and microclimate has a great impact on animal populations. Recovery of many aspects of rainforest structure and function is rapid, though there may be long-term changes in species composition. While resistance and repair have maintained reefs and rainforests in the past, human impacts may threaten their ability to survive.

Unique Sequence of Events Triggers Manta Ray Feeding Frenzy in the Southern Great Barrier Reef, Australia

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Scarla J. Weeks

2015-03-01

Full Text Available Manta rays are classified as Vulnerable to Extinction on the IUCN Red List for Threatened Species. In Australia, a key aggregation site for reef manta rays is Lady Elliot Island (LEI on the Great Barrier Reef, ~7 km from the shelf edge. Here, we investigate the environmental processes that triggered the largest manta ray feeding aggregation yet observed in Australia, in early 2013. We use MODIS sea surface temperature (SST, chlorophyll-a concentration and photic depth data, together with in situ data, to show that anomalous river discharges led to high chlorophyll (anomalies: 10–15 mg∙m−3 and turbid (photic depth anomalies: −15 m river plumes extending out to LEI, and that these became entrained offshore around the periphery of an active cyclonic eddy. Eddy dynamics led to cold bottom intrusions along the shelf edge (6 °C temperature decrease, and at LEI (5 °C temperature decrease. Strongest SST gradients (>1 °C∙km−1 were at the convergent frontal zone between the shelf and eddy-influenced waters, directly overlying LEI. Here, the front intensified on the spring ebb tide to attract and shape the aggregation pattern of foraging manta rays. Future research could focus on mapping the probability and persistence of these ecologically significant frontal zones via remote sensing to aid the management and conservation of marine species.

Diuron tolerance and potential degradation by pelagic microbiomes in the Great Barrier Reef lagoon

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Florent E. Angly

2016-03-01

Full Text Available Diuron is a herbicide commonly used in agricultural areas where excess application causes it to leach into rivers, reach sensitive marine environments like the Great Barrier Reef (GBR lagoon and pose risks to marine life. To investigate the impact of diuron on whole prokaryotic communities that underpin the marine food web and are integral to coral reef health, GBR lagoon water was incubated with diuron at environmentally-relevant concentration (8 µg/L, and sequenced at specific time points over the following year. 16S rRNA gene amplicon profiling revealed no significant short- or long-term effect of diuron on microbiome structure. The relative abundance of prokaryotic phototrophs was not significantly altered by diuron, which suggests that they were largely tolerant at this concentration. Assembly of a metagenome derived from waters sampled at a similar location in the GBR lagoon did not reveal the presence of mutations in the cyanobacterial photosystem that could explain diuron tolerance. However, resident phages displayed several variants of this gene and could potentially play a role in tolerance acquisition. Slow biodegradation of diuron was reported in the incubation flasks, but no correlation with the relative abundance of heterotrophs was evident. Analysis of metagenomic reads supports the hypothesis that previously uncharacterized hydrolases carried by low-abundance species may mediate herbicide degradation in the GBR lagoon. Overall, this study offers evidence that pelagic phototrophs of the GBR lagoon may be more tolerant of diuron than other tropical organisms, and that heterotrophs in the microbial seed bank may have the potential to degrade diuron and alleviate local anthropogenic stresses to inshore GBR ecosystems.

Diuron tolerance and potential degradation by pelagic microbiomes in the Great Barrier Reef lagoon

Science.gov (United States)

Pantos, Olga; Morgan, Thomas C.; Rich, Virginia; Tonin, Hemerson; Bourne, David G.; Mercurio, Philip; Negri, Andrew P.; Tyson, Gene W.

2016-01-01

Diuron is a herbicide commonly used in agricultural areas where excess application causes it to leach into rivers, reach sensitive marine environments like the Great Barrier Reef (GBR) lagoon and pose risks to marine life. To investigate the impact of diuron on whole prokaryotic communities that underpin the marine food web and are integral to coral reef health, GBR lagoon water was incubated with diuron at environmentally-relevant concentration (8 µg/L), and sequenced at specific time points over the following year. 16S rRNA gene amplicon profiling revealed no significant short- or long-term effect of diuron on microbiome structure. The relative abundance of prokaryotic phototrophs was not significantly altered by diuron, which suggests that they were largely tolerant at this concentration. Assembly of a metagenome derived from waters sampled at a similar location in the GBR lagoon did not reveal the presence of mutations in the cyanobacterial photosystem that could explain diuron tolerance. However, resident phages displayed several variants of this gene and could potentially play a role in tolerance acquisition. Slow biodegradation of diuron was reported in the incubation flasks, but no correlation with the relative abundance of heterotrophs was evident. Analysis of metagenomic reads supports the hypothesis that previously uncharacterized hydrolases carried by low-abundance species may mediate herbicide degradation in the GBR lagoon. Overall, this study offers evidence that pelagic phototrophs of the GBR lagoon may be more tolerant of diuron than other tropical organisms, and that heterotrophs in the microbial seed bank may have the potential to degrade diuron and alleviate local anthropogenic stresses to inshore GBR ecosystems. PMID:26989611

Diuron tolerance and potential degradation by pelagic microbiomes in the Great Barrier Reef lagoon.

Science.gov (United States)

Angly, Florent E; Pantos, Olga; Morgan, Thomas C; Rich, Virginia; Tonin, Hemerson; Bourne, David G; Mercurio, Philip; Negri, Andrew P; Tyson, Gene W

2016-01-01

Diuron is a herbicide commonly used in agricultural areas where excess application causes it to leach into rivers, reach sensitive marine environments like the Great Barrier Reef (GBR) lagoon and pose risks to marine life. To investigate the impact of diuron on whole prokaryotic communities that underpin the marine food web and are integral to coral reef health, GBR lagoon water was incubated with diuron at environmentally-relevant concentration (8 µg/L), and sequenced at specific time points over the following year. 16S rRNA gene amplicon profiling revealed no significant short- or long-term effect of diuron on microbiome structure. The relative abundance of prokaryotic phototrophs was not significantly altered by diuron, which suggests that they were largely tolerant at this concentration. Assembly of a metagenome derived from waters sampled at a similar location in the GBR lagoon did not reveal the presence of mutations in the cyanobacterial photosystem that could explain diuron tolerance. However, resident phages displayed several variants of this gene and could potentially play a role in tolerance acquisition. Slow biodegradation of diuron was reported in the incubation flasks, but no correlation with the relative abundance of heterotrophs was evident. Analysis of metagenomic reads supports the hypothesis that previously uncharacterized hydrolases carried by low-abundance species may mediate herbicide degradation in the GBR lagoon. Overall, this study offers evidence that pelagic phototrophs of the GBR lagoon may be more tolerant of diuron than other tropical organisms, and that heterotrophs in the microbial seed bank may have the potential to degrade diuron and alleviate local anthropogenic stresses to inshore GBR ecosystems.

Coral reefs and the World Bank.

Science.gov (United States)

Hatziolos, M

1997-01-01

The World Bank¿s involvement in coral reef conservation is part of a larger effort to promote the sound management of coastal and marine resources. This involves three major thrusts: partnerships, investments, networks and knowledge. As an initial partner and early supporter of the International Coral Reef Initiative (ICRI), the Bank serves as the executive planning committee of ICRI. In partnership with the World Conservation Union and the Great Barrier Reef Marine Park Authority, the Bank promotes the efforts towards the establishment and maintenance of a globally representative system of marine protected areas. In addition, the Bank invested over $120 million in coral reef rehabilitation and protection programs in several countries. Furthermore, the Bank developed a ¿Knowledge Bank¿ that would market ideas and knowledge to its clients along with investment projects. This aimed to put the best global knowledge on environmentally sustainable development in the hands of its staff and clients. During the celebration of 1997, as the International Year of the Reef, the Bank planned to cosponsor an associated event that would highlight the significance of coral reefs and encourage immediate action to halt their degradation to conserve this unique ecosystem.

Dispersal of adult black marlin (Istiompax indica) from a Great Barrier Reef spawning aggregation.

Science.gov (United States)

Domeier, Michael L; Speare, Peter

2012-01-01

The black marlin (Istiompax indica) is one of the largest bony fishes in the world with females capable of reaching a mass of over 700 kg. This highly migratory predator occurs in the tropical regions of the Pacific and Indian Oceans, and is the target of regional recreational and commercial fisheries. Through the sampling of ichthyoplankton and ovaries we provide evidence that the relatively high seasonal abundance of black marlin off the Great Barrier Reef is, in fact, a spawning aggregation. Furthermore, through the tracking of individual black marlin via satellite popup tags, we document the dispersal of adult black marlin away from the spawning aggregation, thereby identifying the catchment area for this spawning stock. Although tag shedding is an issue when studying billfish, we tentatively identify the catchment area for this stock of black marlin to extend throughout the Coral Sea, including the waters of Papua New Guinea, the Solomon Islands, Micronesia, New Caledonia, Kiribati, Vanuatu, Fiji, Tuvalu and Nauru.

Dispersal of adult black marlin (Istiompax indica from a Great Barrier Reef spawning aggregation.

Directory of Open Access Journals (Sweden)

Michael L Domeier

Full Text Available The black marlin (Istiompax indica is one of the largest bony fishes in the world with females capable of reaching a mass of over 700 kg. This highly migratory predator occurs in the tropical regions of the Pacific and Indian Oceans, and is the target of regional recreational and commercial fisheries. Through the sampling of ichthyoplankton and ovaries we provide evidence that the relatively high seasonal abundance of black marlin off the Great Barrier Reef is, in fact, a spawning aggregation. Furthermore, through the tracking of individual black marlin via satellite popup tags, we document the dispersal of adult black marlin away from the spawning aggregation, thereby identifying the catchment area for this spawning stock. Although tag shedding is an issue when studying billfish, we tentatively identify the catchment area for this stock of black marlin to extend throughout the Coral Sea, including the waters of Papua New Guinea, the Solomon Islands, Micronesia, New Caledonia, Kiribati, Vanuatu, Fiji, Tuvalu and Nauru.

The relative abundance of dimethylsulfoniopropionate (DMSP) among other zwitterions in branching coral at Heron Island, southern Great Barrier Reef.

Science.gov (United States)

Swan, Hilton B; Deschaseaux, Elisabeth S M; Jones, Graham B; Eyre, Bradley D

2017-07-01

Dimethylsulfoniopropionate (DMSP) and eleven other target zwitterions were quantified in the branch tips of six Acropora species and Stylophora pistillata hard coral growing on the reef flat surrounding Heron Island in the southern Great Barrier Reef (GBR), Australia. Hydrophilic interaction liquid chromatography mass spectrometry (HILIC-MS) was used for sample analysis with isotope dilution MS applied to quantify DMSP. The concentration of DMSP was ten times greater in A. aspera than A. valida, with this difference being maintained throughout the spring, summer and winter seasons. In contrast, glycine betaine was present in significantly higher concentrations in these species during the summer than the winter. Exposure of branch tips of A. aspera to air and hypo-saline seawater for up to 1 h did not alter the concentrations of DMSP present in the coral when compared with control samples. DMSP was the most abundant target zwitterion in the six Acropora species examined, ranging from 44-78% of all target zwitterions in A. millepora and A. aspera, respectively. In contrast, DMSP only accounted for 7% in S. pistillata, with glycine betaine and stachydrine collectively accounting for 88% of all target zwitterions in this species. The abundance of DMSP in the six Acropora species examined points to Acropora coral being an important source for the biogeochemical cycling of sulfur throughout the GBR, since this reef-building branching coral dominates the coral cover of the GBR. Graphical Abstract HILIC-MS extracted ion chromatogram showing zwitterionic metabolites from the branching coral Acropora isopora.

Effects of High Dissolved Inorganic and Organic Carbon Availability on the Physiology of the Hard Coral Acropora millepora from the Great Barrier Reef.

Directory of Open Access Journals (Sweden)

Friedrich W Meyer

Full Text Available Coral reefs are facing major global and local threats due to climate change-induced increases in dissolved inorganic carbon (DIC and because of land-derived increases in organic and inorganic nutrients. Recent research revealed that high availability of labile dissolved organic carbon (DOC negatively affects scleractinian corals. Studies on the interplay of these factors, however, are lacking, but urgently needed to understand coral reef functioning under present and near future conditions. This experimental study investigated the individual and combined effects of ambient and high DIC (pCO2 403 μatm/ pHTotal 8.2 and 996 μatm/pHTotal 7.8 and DOC (added as Glucose 0 and 294 μmol L-1, background DOC concentration of 83 μmol L-1 availability on the physiology (net and gross photosynthesis, respiration, dark and light calcification, and growth of the scleractinian coral Acropora millepora (Ehrenberg, 1834 from the Great Barrier Reef over a 16 day interval. High DIC availability did not affect photosynthesis, respiration and light calcification, but significantly reduced dark calcification and growth by 50 and 23%, respectively. High DOC availability reduced net and gross photosynthesis by 51% and 39%, respectively, but did not affect respiration. DOC addition did not influence calcification, but significantly increased growth by 42%. Combination of high DIC and high DOC availability did not affect photosynthesis, light calcification, respiration or growth, but significantly decreased dark calcification when compared to both controls and DIC treatments. On the ecosystem level, high DIC concentrations may lead to reduced accretion and growth of reefs dominated by Acropora that under elevated DOC concentrations will likely exhibit reduced primary production rates, ultimately leading to loss of hard substrate and reef erosion. It is therefore important to consider the potential impacts of elevated DOC and DIC simultaneously to assess real world

Water Quality and River Plume Monitoring in the Great Barrier Reef: An Overview of Methods Based on Ocean Colour Satellite Data

Directory of Open Access Journals (Sweden)

Michelle J. Devlin

2015-09-01

Full Text Available A strong driver of water quality change in the Great Barrier Reef (GBR is the pulsed or intermittent nature of terrestrial inputs into the GBR lagoon, including delivery of increased loads of sediments, nutrients, and toxicants via flood river plumes (hereafter river plumes during the wet season. Cumulative pressures from extreme weather with a high frequency of large scale flooding in recent years has been linked to the large scale reported decline in the health of inshore seagrass systems and coral reefs in the central areas of the GBR, with concerns for the recovery potential of these impacted ecosystems. Management authorities currently rely on remotely-sensed (RS and in situ data for water quality monitoring to guide their assessment of water quality conditions in the GBR. The use of remotely-sensed satellite products provides a quantitative and accessible tool for scientists and managers. These products, coupled with in situ data, and more recently modelled data, are valuable for quantifying the influence of river plumes on seagrass and coral reef habitat in the GBR. This article reviews recent remote sensing techniques developed to monitor river plumes and water quality in the GBR. We also discuss emerging research that integrates hydrodynamic models with remote sensing and in situ data, enabling us to explore impacts of different catchment management strategies on GBR water quality.

Functionally diverse reef-fish communities ameliorate coral disease.

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Raymundo, Laurie J; Halford, Andrew R; Maypa, Aileen P; Kerr, Alexander M

2009-10-06

Coral reefs, the most diverse of marine ecosystems, currently experience unprecedented levels of degradation. Diseases are now recognized as a major cause of mortality in reef-forming corals and are complicit in phase shifts of reef ecosystems to algal-dominated states worldwide. Even so, factors contributing to disease occurrence, spread, and impact remain poorly understood. Ecosystem resilience has been linked to the conservation of functional diversity, whereas overfishing reduces functional diversity through cascading, top-down effects. Hence, we tested the hypothesis that reefs with trophically diverse reef fish communities have less coral disease than overfished reefs. We surveyed reefs across the central Philippines, including well-managed marine protected areas (MPAs), and found that disease prevalence was significantly negatively correlated with fish taxonomic diversity. Further, MPAs had significantly higher fish diversity and less disease than unprotected areas. We subsequently investigated potential links between coral disease and the trophic components of fish diversity, finding that only the density of coral-feeding chaetodontid butterflyfishes, seldom targeted by fishers, was positively associated with disease prevalence. These previously uncharacterized results are supported by a second large-scale dataset from the Great Barrier Reef. We hypothesize that members of the charismatic reef-fish family Chaetodontidae are major vectors of coral disease by virtue of their trophic specialization on hard corals and their ecological release in overfished areas, particularly outside MPAs.

In the other 90%: phytoplankton responses to enhanced nutrient availability in the Great Barrier Reef Lagoon

International Nuclear Information System (INIS)

Furnas, Miles; Mitchell, Alan; Skuza, Michele; Brodie, Jon

2005-01-01

Our view of how water quality effects ecosystems of the Great Barrier Reef (GBR) is largely framed by observed or expected responses of large benthic organisms (corals, algae, seagrasses) to enhanced levels of dissolved nutrients, sediments and other pollutants in reef waters. In the case of nutrients, however, benthic organisms and communities are largely responding to materials which have cycled through and been transformed by pelagic communities dominated by micro-algae (phytoplankton), protozoa, flagellates and bacteria. Because GBR waters are characterised by high ambient light intensities and water temperatures, inputs of nutrients from both internal and external sources are rapidly taken up and converted to organic matter in inter-reefal waters. Phytoplankton growth, pelagic grazing and remineralisation rates are very rapid. Dominant phytoplankton species in GBR waters have in situ growth rates which range from ∼1 to several doublings per day. To a first approximation, phytoplankton communities and their constituent nutrient content turn over on a daily basis. Relative abundances of dissolved nutrient species strongly indicate N limitation of new biomass formation. Direct ( 15 N) and indirect ( 14 C) estimates of N demand by phytoplankton indicate dissolved inorganic N pools have turnover times on the order of hours to days. Turnover times for inorganic phosphorus in the water column range from hours to weeks. Because of the rapid assimilation of nutrients by plankton communities, biological responses in benthic communities to changed water quality are more likely driven (at several ecological levels) by organic matter derived from pelagic primary production than by dissolved nutrient stocks alone

The Tinhare-Boipeba-Camamu reefs, Bahia, Brazil; Os recifes de Tinhare-Boipeba-Camamu, Bahia, Brasil

Energy Technology Data Exchange (ETDEWEB)

Kikuchi, Ruy K.P.; Oliveira, Marilia D.M.; Leao, Zelinda M.A.N. [Universidade Federal da Bahia (UFBA), Salvador, BA (Brazil); Silva, Rafael M. [AguaViva (Brazil); Martins, Pedro M.R. [El Paso Oleo e Gas, Natal, RN (Brazil)

2008-07-01

The coastal zone and continental shelf along Morro de Sao Paulo to Itacare, despite having a great quantity of reefs, have only received a closer attention on this aspect in the last 5 years. Until then, there was only one scientific reference published by Charles F. Hartti, more than a century ago, in his work Geology and Physical Geography of Brazil. The beginning of petroleum exploration in Camamu-Almada Basin demanded a great effort to enhance knowledge of the reef ecosystem in the area. The assessments developed by El Paso since 2002, used visual censuses in band and line intercept transects, organized in the AGRRA and PETRORISCO protocols. Nowadays we have a detailed digital map of the reefs, as part of a GIS, containing information about reef vitality, that include reefs attached to the coast and reef Banks of the region in the vicinity of Pratigi, once known only to fishermen. This article presents a overview of the reefs mapped and its vitality described up to now. (author)

Relationships between structural complexity, coral traits, and reef fish assemblages

Science.gov (United States)

Darling, Emily S.; Graham, Nicholas A. J.; Januchowski-Hartley, Fraser A.; Nash, Kirsty L.; Pratchett, Morgan S.; Wilson, Shaun K.

2017-06-01

With the ongoing loss of coral cover and the associated flattening of reef architecture, understanding the links between coral habitat and reef fishes is of critical importance. Here, we investigate whether considering coral traits and functional diversity provides new insights into the relationship between structural complexity and reef fish communities, and whether coral traits and community composition can predict structural complexity. Across 157 sites in Seychelles, Maldives, the Chagos Archipelago, and Australia's Great Barrier Reef, we find that structural complexity and reef zone are the strongest and most consistent predictors of reef fish abundance, biomass, species richness, and trophic structure. However, coral traits, diversity, and life histories provided additional predictive power for models of reef fish assemblages, and were key drivers of structural complexity. Our findings highlight that reef complexity relies on living corals—with different traits and life histories—continuing to build carbonate skeletons, and that these nuanced relationships between coral assemblages and habitat complexity can affect the structure of reef fish assemblages. Seascape-level estimates of structural complexity are rapid and cost effective with important implications for the structure and function of fish assemblages, and should be incorporated into monitoring programs.

Local-scale projections of coral reef futures and implications of the Paris Agreement.

Science.gov (United States)

van Hooidonk, Ruben; Maynard, Jeffrey; Tamelander, Jerker; Gove, Jamison; Ahmadia, Gabby; Raymundo, Laurie; Williams, Gareth; Heron, Scott F; Planes, Serge

2016-12-21

Increasingly frequent severe coral bleaching is among the greatest threats to coral reefs posed by climate change. Global climate models (GCMs) project great spatial variation in the timing of annual severe bleaching (ASB) conditions; a point at which reefs are certain to change and recovery will be limited. However, previous model-resolution projections (~1 × 1°) are too coarse to inform conservation planning. To meet the need for higher-resolution projections, we generated statistically downscaled projections (4-km resolution) for all coral reefs; these projections reveal high local-scale variation in ASB. Timing of ASB varies >10 years in 71 of the 87 countries and territories with >500 km 2 of reef area. Emissions scenario RCP4.5 represents lower emissions mid-century than will eventuate if pledges made following the 2015 Paris Climate Change Conference (COP21) become reality. These pledges do little to provide reefs with more time to adapt and acclimate prior to severe bleaching conditions occurring annually. RCP4.5 adds 11 years to the global average ASB timing when compared to RCP8.5; however, >75% of reefs still experience ASB before 2070 under RCP4.5. Coral reef futures clearly vary greatly among and within countries, indicating the projections warrant consideration in most reef areas during conservation and management planning.

An assessment of an environmental gradient using coral geochemical records, Whitsunday Islands, Great Barrier Reef, Australia

International Nuclear Information System (INIS)

Lewis, S.E.; Brodie, J.E.; McCulloch, M.T.; Mallela, J.; Jupiter, S.D.; Stuart Williams, H.; Lough, J.M.; Matson, E.G.

2012-01-01

Coral cores were collected along an environmental and water quality gradient through the Whitsunday Island group, Great Barrier Reef (Australia), for trace element and stable isotope analysis. The primary aim of the study was to examine if this gradient could be detected in coral records and, if so, whether the gradient has changed over time with changing land use in the adjacent river catchments. Y/Ca was the trace element ratio which varied spatially across the gradient, with concentrations progressively decreasing away from the river mouths. The Ba/Ca and Y/Ca ratios were the only indicators of change in the gradient through time, increasing shortly after European settlement. The Mn/Ca ratio responded to local disturbance related to the construction of tourism infrastructure. Nitrogen isotope ratios showed no apparent trend over time. This study highlights the importance of site selection when using coral records to record regional environmental signals.

Guiding principles for the improved governance of port and shipping impacts in the Great Barrier Reef.

Science.gov (United States)

Grech, A; Bos, M; Brodie, J; Coles, R; Dale, A; Gilbert, R; Hamann, M; Marsh, H; Neil, K; Pressey, R L; Rasheed, M A; Sheaves, M; Smith, A

2013-10-15

The Great Barrier Reef (GBR) region of Queensland, Australia, encompasses a complex and diverse array of tropical marine ecosystems of global significance. The region is also a World Heritage Area and largely within one of the world's best managed marine protected areas. However, a recent World Heritage Committee report drew attention to serious governance problems associated with the management of ports and shipping. We review the impacts of ports and shipping on biodiversity in the GBR, and propose a series of guiding principles to improve the current governance arrangements. Implementing these principles will increase the capacity of decision makers to minimize the impacts of ports and shipping on biodiversity, and will provide certainty and clarity to port operators and developers. A 'business as usual' approach could lead to the GBR's inclusion on the List of World Heritage in Danger in 2014. Copyright © 2013 Elsevier Ltd. All rights reserved.

Dissolved inorganic carbon, alkalinity, temperature, salinity and SEA SURFACE TEMPERATURE collected from discrete sample and profile observations using CTD, bottle and other instruments from L'ASTROLABE in the Indian Ocean, South Pacific Ocean and others from 2002-10-16 to 2012-03-06 (NCEI Accession 0157351)

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — NCEI Accession 0157351 includes chemical, discrete sample, physical and profile data collected from L'ASTROLABE in the Indian Ocean, South Pacific Ocean, Southern...

Microbial contributions to the persistence of coral reefs.

Science.gov (United States)

Webster, Nicole S; Reusch, Thorsten B H

2017-10-01

On contemplating the adaptive capacity of reef organisms to a rapidly changing environment, the microbiome offers significant and greatly unrecognised potential. Microbial symbionts contribute to the physiology, development, immunity and behaviour of their hosts, and can respond very rapidly to changing environmental conditions, providing a powerful mechanism for acclimatisation and also possibly rapid evolution of coral reef holobionts. Environmentally acquired fluctuations in the microbiome can have significant functional consequences for the holobiont phenotype upon which selection can act. Environmentally induced changes in microbial abundance may be analogous to host gene duplication, symbiont switching / shuffling as a result of environmental change can either remove or introduce raw genetic material into the holobiont; and horizontal gene transfer can facilitate rapid evolution within microbial strains. Vertical transmission of symbionts is a key feature of many reef holobionts and this would enable environmentally acquired microbial traits to be faithfully passed to future generations, ultimately facilitating microbiome-mediated transgenerational acclimatisation (MMTA) and potentially even adaptation of reef species in a rapidly changing climate. In this commentary, we highlight the capacity and mechanisms for MMTA in reef species, propose a modified Price equation as a framework for assessing MMTA and recommend future areas of research to better understand how microorganisms contribute to the transgenerational acclimatisation of reef organisms, which is essential if we are to reliably predict the consequences of global change for reef ecosystems.

The effects of river run-off on water clarity across the central Great Barrier Reef.

Science.gov (United States)

Fabricius, K E; Logan, M; Weeks, S; Brodie, J

2014-07-15

Changes in water clarity across the shallow continental shelf of the central Great Barrier Reef were investigated from ten years of daily river load, oceanographic and MODIS-Aqua data. Mean photic depth (i.e., the depth of 10% of surface irradiance) was related to river loads after statistical removal of wave and tidal effects. Across the ∼25,000 km(2) area, photic depth was strongly related to river freshwater and phosphorus loads (R(2)=0.65 and 0.51, respectively). In the six wetter years, photic depth was reduced by 19.8% and below water quality guidelines for 156 days, compared to 9 days in the drier years. After onset of the seasonal river floods, photic depth was reduced for on average 6-8 months, gradually returning to clearer baseline values. Relationships were strongest inshore and midshelf (∼12-80 km from the coast), and weaker near the chronically turbid coast. The data show that reductions in river loads would measurably improve shelf water clarity, with significant ecosystem health benefits. Crown Copyright © 2014. Published by Elsevier Ltd. All rights reserved.

Hurricanes, Coral Reefs and Rainforests: Resistance, Ruin and Recovery in the Caribbean

Science.gov (United States)

A. E. Lugo; C. S. Rogers; S. W Nixon

2000-01-01

The coexistence of hurricanes, coral reefs, and rainforests in the Caribbean demonstrates that highly structured ecosystems with great diversity can flourish in spite of recurring exposure to intense destructive energy. Coral reefs develop in response to wave energy and resist hurricanes largely by virtue of their structural strength. Limited fetch also protects some...

Using virtual reality to estimate aesthetic values of coral reefs

Science.gov (United States)

Clifford, Sam; Caley, M. Julian; Pearse, Alan R.; Brown, Ross; James, Allan; Christensen, Bryce; Bednarz, Tomasz; Anthony, Ken; González-Rivero, Manuel; Mengersen, Kerrie; Peterson, Erin E.

2018-01-01

Aesthetic value, or beauty, is important to the relationship between humans and natural environments and is, therefore, a fundamental socio-economic attribute of conservation alongside other ecosystem services. However, beauty is difficult to quantify and is not estimated well using traditional approaches to monitoring coral-reef aesthetics. To improve the estimation of ecosystem aesthetic values, we developed and implemented a novel framework used to quantify features of coral-reef aesthetics based on people's perceptions of beauty. Three observer groups with different experience to reef environments (Marine Scientist, Experienced Diver and Citizen) were virtually immersed in Australian's Great Barrier Reef (GBR) using 360° images. Perceptions of beauty and observations were used to assess the importance of eight potential attributes of reef-aesthetic value. Among these, heterogeneity, defined by structural complexity and colour diversity, was positively associated with coral-reef-aesthetic values. There were no group-level differences in the way the observer groups perceived reef aesthetics suggesting that past experiences with coral reefs do not necessarily influence the perception of beauty by the observer. The framework developed here provides a generic tool to help identify indicators of aesthetic value applicable to a wide variety of natural systems. The ability to estimate aesthetic values robustly adds an important dimension to the holistic conservation of the GBR, coral reefs worldwide and other natural ecosystems. PMID:29765676

Coral reefs will transition to net dissolving before end of century

Science.gov (United States)

Eyre, Bradley D.; Cyronak, Tyler; Drupp, Patrick; De Carlo, Eric Heinen; Sachs, Julian P.; Andersson, Andreas J.

2018-02-01

Ocean acidification refers to the lowering of the ocean’s pH due to the uptake of anthropogenic CO2 from the atmosphere. Coral reef calcification is expected to decrease as the oceans become more acidic. Dissolving calcium carbonate (CaCO3) sands could greatly exacerbate reef loss associated with reduced calcification but is presently poorly constrained. Here we show that CaCO3 dissolution in reef sediments across five globally distributed sites is negatively correlated with the aragonite saturation state (Ωar) of overlying seawater and that CaCO3 sediment dissolution is 10-fold more sensitive to ocean acidification than coral calcification. Consequently, reef sediments globally will transition from net precipitation to net dissolution when seawater Ωar reaches 2.92 ± 0.16 (expected circa 2050 CE). Notably, some reefs are already experiencing net sediment dissolution.

Seven new species of Paleanotus (Annelida: Chrysopetalidae) described from Lizard Island, Great Barrier Reef, and coral reefs of northern Australia and the Indo-Pacific: two cryptic species pairs revealed between western Pacific Ocean and the eastern Indian Ocean.

Science.gov (United States)

Watson, Charlotte

2015-09-18

Morphological investigation into the paleate genus Paleanotus Schmarda 1861 of the family Chrysopetalidae from northern Australian coral reefs, primarily Lizard Island and outlying reefs, included a complex of very small, slender individuals (length < 5 mm). This complex resolved into 7 new species, described herein: Paleanotus inornatus n. sp., P. adornatus n. sp., P. chrysos n. sp., P. aquifolia n. sp., P. latifolia n. sp., P. silus n. sp., and P. silopsis n. sp. A key is provided to the new species and Paleanotus distinguished from Treptopale and Hyalopale, two closely related genera. Diagnostic features of the apical structure and shape of the notochaetal main paleae plus median paleae shape and raised rib pattern, differentiates each species from the other. Gametous states are described. Two cryptic species pairs (Paleanotus silopsis n. sp. and P. silus n. sp.; Paleanotus aquifolia n. sp. and P. latifolia n. sp.) were identified. In each case one species is restricted to either the NE or NW Australian coast. In each pair the most eastern point for the NW Australian species range occurs at Darwin, western Arnhemland, Northern Territory. Additional material for each species pair extends their respective ranges northwards: NW Australia to Thailand, Andaman Sea, eastern Indian Ocean or NE Australia, Great Barrier Reef to the Philippines, western Pacific Ocean. Cryptic morphology and potential genetic diversity is discussed in Paleanotus inornatus n. sp. and P. adornatus n. sp. that possess overlapping widespread distribution patterns across northern Australia and Indo-Pacific reefs. The smallest bodied taxon, Paleanotus chrysos n. sp. is the only species with a Coral Sea range encompassing Lizard Island, Heron Island and New Caledonia.

Exposure of inshore corals to suspended sediments due to wave-resuspension and river plumes in the central Great Barrier Reef: A reappraisal

Science.gov (United States)

Orpin, Alan R.; Ridd, Peter V.

2012-09-01

Suspended sediment in the coastal zone is an important limiting factor for the growth and health of inshore coral reefs. The Great Barrier Reef (GBR) lagoon receives sediment from a number of tropical rivers and the physical and biological effects of riverine discharge and turbidity within the lagoon are of considerable scientific and public interest. Published data from two inshore regions of the GBR are reviewed herein to evaluate the relative influence of river plumes and wave resuspension on suspended sediment concentration (SSC) around coral communities over a range of timescales. Data from Cleveland Bay and from other sites near the mouth of the Tully River show that wave resuspension is the most dominant mechanism controlling SSC at inshore reefs. At many nearshore areas today fine-grained bed sediment is abundant, consistent with millennial-scale geological evidence of sediment dispersal prior to European settlement and catchment impacts. Flocculation, particle settling and dilution occurs within the river plume, and riverine sediment concentrations at reefs directly attributable to individual flood inputs is significantly reduced, suggesting that the plume component is a relatively small contribution to the total suspended sediment mass balance over inter-annual timescales. Resuspension events can generate higher ambient SSC than that measured in flood waters (e.g. Tully River). In addition, while visually spectacular, satellite and aerial images offer limited quantitative information of total sediment load carried by hypopycnal plumes, as many of these plumes may contain algal blooms but relatively low concentrations of suspended sediment (ca. processes common to many continental shelves globally. Despite the examples examined in detail herein, the role of frequency, magnitude and duration in determining the impact or exposure of corals to elevated SSCs is poorly constrained by limited quantitative measurements during events, and our ability to place

Chimerism in wild adult populations of the broadcast spawning coral Acropora millepora on the Great Barrier Reef.

Directory of Open Access Journals (Sweden)

Eneour Puill-Stephan

2009-11-01

Full Text Available Chimeras are organisms containing tissues or cells of two or more genetically distinct individuals, and are known to exist in at least nine phyla of protists, plants, and animals. Although widespread and common in marine invertebrates, the extent of chimerism in wild populations of reef corals is unknown.The extent of chimerism was explored within two populations of a common coral, Acropora millepora, on the Great Barrier Reef, Australia, by using up to 12 polymorphic DNA microsatellite loci. At least 2% and 5% of Magnetic Island and Pelorus Island populations of A. millepora, respectively, were found to be chimeras (3% overall, based on conservative estimates. A slightly less conservative estimate indicated that 5% of colonies in each population were chimeras. These values are likely to be vast underestimates of the true extent of chimerism, as our sampling protocol was restricted to a maximum of eight branches per colony, while most colonies consist of hundreds of branches. Genotypes within chimeric corals showed high relatedness, indicating that genetic similarity is a prerequisite for long-term acceptance of non-self genotypes within coral colonies.While some brooding corals have been shown to form genetic chimeras in their early life history stages under experimental conditions, this study provides the first genetic evidence of the occurrence of coral chimeras in the wild and of chimerism in a broadcast spawning species. We hypothesize that chimerism is more widespread in corals than previously thought, and suggest that this has important implications for their resilience, potentially enhancing their capacity to compete for space and respond to stressors such as pathogen infection.

Digital reef rugosity estimates coral reef habitat complexity.

Science.gov (United States)

Dustan, Phillip; Doherty, Orla; Pardede, Shinta

2013-01-01

Ecological habitats with greater structural complexity contain more species due to increased niche diversity. This is especially apparent on coral reefs where individual coral colonies aggregate to give a reef its morphology, species zonation, and three dimensionality. Structural complexity is classically measured with a reef rugosity index, which is the ratio of a straight line transect to the distance a flexible chain of equal length travels when draped over the reef substrate; yet, other techniques from visual categories to remote sensing have been used to characterize structural complexity at scales from microhabitats to reefscapes. Reef-scale methods either lack quantitative precision or are too time consuming to be routinely practical, while remotely sensed indices are mismatched to the finer scale morphology of coral colonies and reef habitats. In this communication a new digital technique, Digital Reef Rugosity (DRR) is described which utilizes a self-contained water level gauge enabling a diver to quickly and accurately characterize rugosity with non-invasive millimeter scale measurements of coral reef surface height at decimeter intervals along meter scale transects. The precise measurements require very little post-processing and are easily imported into a spreadsheet for statistical analyses and modeling. To assess its applicability we investigated the relationship between DRR and fish community structure at four coral reef sites on Menjangan Island off the northwest corner of Bali, Indonesia and one on mainland Bali to the west of Menjangan Island; our findings show a positive relationship between DRR and fish diversity. Since structural complexity drives key ecological processes on coral reefs, we consider that DRR may become a useful quantitative community-level descriptor to characterize reef complexity.

Partial pressure (or fugacity) of carbon dioxide, salinity and other variables collected from Surface underway observations using Barometric pressure sensor, Carbon dioxide (CO2) gas analyzer and other instruments from L'ASTROLABE in the Indian Ocean, South Pacific Ocean and others from 1996-10-21 to 1996-11-23 (NCEI Accession 0157233)

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — NCEI Accession 0157233 includes Surface underway, chemical, meteorological, optical and physical data collected from L'ASTROLABE in the Indian Ocean, South Pacific...

Partial pressure (or fugacity) of carbon dioxide, salinity and other variables collected from Surface underway observations using Barometric pressure sensor, Carbon dioxide (CO2) gas analyzer and other instruments from L'ASTROLABE in the Indian Ocean, South Pacific Ocean and others from 1997-02-02 to 1997-02-17 (NCEI Accession 0157416)

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — NCEI Accession 0157416 includes Surface underway, chemical, meteorological, optical and physical data collected from L'ASTROLABE in the Indian Ocean, South Pacific...

Partial pressure (or fugacity) of carbon dioxide, salinity and other variables collected from Surface underway observations using Barometric pressure sensor, Carbon dioxide (CO2) gas analyzer and other instruments from L'ASTROLABE in the Indian Ocean, South Pacific Ocean and others from 2002-10-16 to 2006-12-31 (NCEI Accession 0157276)

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — NCEI Accession 0157276 includes Surface underway, chemical, meteorological and physical data collected from L'ASTROLABE in the Indian Ocean, South Pacific Ocean,...

Understanding Resilience in a Vulnerable Industry: the Case of Reef Tourism in Australia

Directory of Open Access Journals (Sweden)

Duan Biggs

2011-03-01

Full Text Available Understanding the resilience of vulnerable sectors of social-ecological systems is critical in an era of escalating global change. The coral reef tourism sector is highly vulnerable not only to ecological effects of climate change and other anthropogenic disturbances on reefs, but also to shocks such as economic recession and energy price escalation. Commercial tourism enterprises are key players in reef tourism in Australia and elsewhere. However, the factors that confer resilience to reef-based tourism enterprises, or the reef tourism sector more broadly, in the face of large disturbances have not been investigated to date. This paper empirically examines the perceived resilience of reef tourism enterprises on Australia's Great Barrier Reef to large disturbances or shocks. Binary logistic regression analysis of two measures of enterprise resilience demonstrates the importance of human capital in strengthening enterprise resilience. Lifestyle identity, measured as the extent to which owners and senior managers are active in reef tourism as a lifestyle choice, is positively related to enterprise resilience. Finally, reef tourism enterprises indicate that financial and marketing support are the most important actions that government can take to support enterprises in the face of a large shock.

Future Scenarios as a Research Tool: Investigating Climate Change Impacts, Adaptation Options and Outcomes for the Great Barrier Reef, Australia.

Science.gov (United States)

Evans, Louisa S; Hicks, Christina C; Fidelman, Pedro; Tobin, Renae C; Perry, Allison L

2013-01-01

Climate change is a significant future driver of change in coastal social-ecological systems. Our knowledge of impacts, adaptation options, and possible outcomes for marine environments and coastal industries is expanding, but remains limited and uncertain. Alternative scenarios are a way to explore potential futures under a range of conditions. We developed four alternative future scenarios for the Great Barrier Reef and its fishing and tourism industries positing moderate and more extreme (2-3 °C above pre-industrial temperatures) warming for 2050 and contrasting 'limited' and 'ideal' ecological and social adaptation. We presented these scenarios to representatives of key stakeholder groups to assess the perceived viability of different social adaptation options to deliver desirable outcomes under varied contexts.

Sediments and herbivory as sensitive indicators of coral reef degradation

Directory of Open Access Journals (Sweden)

Christopher H. R. Goatley

2016-03-01

Full Text Available Around the world, the decreasing health of coral reef ecosystems has highlighted the need to better understand the processes of reef degradation. The development of more sensitive tools, which complement traditional methods of monitoring coral reefs, may reveal earlier signs of degradation and provide an opportunity for pre-emptive responses. We identify new, sensitive metrics of ecosystem processes and benthic composition that allow us to quantify subtle, yet destabilizing, changes in the ecosystem state of an inshore coral reef on the Great Barrier Reef. Following severe climatic disturbances over the period 2011-2012, the herbivorous reef fish community of the reef did not change in terms of biomass or functional groups present. However, fish-based ecosystem processes showed marked changes, with grazing by herbivorous fishes declining by over 90%. On the benthos, algal turf lengths in the epilithic algal matrix increased more than 50% while benthic sediment loads increased 37-fold. The profound changes in processes, despite no visible change in ecosystem state, i.e., no shift to macroalgal dominance, suggest that although the reef has not undergone a visible regime-shift, the ecosystem is highly unstable, and may sit on an ecological knife-edge. Sensitive, process-based metrics of ecosystem state, such as grazing or browsing rates thus appear to be effective in detecting subtle signs of degradation and may be critical in identifying ecosystems at risk for the future.

Global warming transforms coral reef assemblages.

Science.gov (United States)

Hughes, Terry P; Kerry, James T; Baird, Andrew H; Connolly, Sean R; Dietzel, Andreas; Eakin, C Mark; Heron, Scott F; Hoey, Andrew S; Hoogenboom, Mia O; Liu, Gang; McWilliam, Michael J; Pears, Rachel J; Pratchett, Morgan S; Skirving, William J; Stella, Jessica S; Torda, Gergely

2018-04-01

Global warming is rapidly emerging as a universal threat to ecological integrity and function, highlighting the urgent need for a better understanding of the impact of heat exposure on the resilience of ecosystems and the people who depend on them 1 . Here we show that in the aftermath of the record-breaking marine heatwave on the Great Barrier Reef in 2016 2 , corals began to die immediately on reefs where the accumulated heat exposure exceeded a critical threshold of degree heating weeks, which was 3-4 °C-weeks. After eight months, an exposure of 6 °C-weeks or more drove an unprecedented, regional-scale shift in the composition of coral assemblages, reflecting markedly divergent responses to heat stress by different taxa. Fast-growing staghorn and tabular corals suffered a catastrophic die-off, transforming the three-dimensionality and ecological functioning of 29% of the 3,863 reefs comprising the world's largest coral reef system. Our study bridges the gap between the theory and practice of assessing the risk of ecosystem collapse, under the emerging framework for the International Union for Conservation of Nature (IUCN) Red List of Ecosystems 3 , by rigorously defining both the initial and collapsed states, identifying the major driver of change, and establishing quantitative collapse thresholds. The increasing prevalence of post-bleaching mass mortality of corals represents a radical shift in the disturbance regimes of tropical reefs, both adding to and far exceeding the influence of recurrent cyclones and other local pulse events, presenting a fundamental challenge to the long-term future of these iconic ecosystems.

A diverse assemblage of reef corals thriving in a dynamic intertidal reef setting (Bonaparte Archipelago, Kimberley, Australia.

Directory of Open Access Journals (Sweden)

Zoe T Richards

Full Text Available The susceptibility of reef-building corals to climatic anomalies is well documented and a cause of great concern for the future of coral reefs. Reef corals are normally considered to tolerate only a narrow range of climatic conditions with only a small number of species considered heat-tolerant. Occasionally however, corals can be seen thriving in unusually harsh reef settings and these are cause for some optimism about the future of coral reefs. Here we document for the first time a diverse assemblage of 225 species of hard corals occurring in the intertidal zone of the Bonaparte Archipelago, north western Australia. We compare the environmental conditions at our study site (tidal regime, SST and level of turbidity with those experienced at four other more typical tropical reef locations with similar levels of diversity. Physical extremes in the Bonaparte Archipelago include tidal oscillations of up to 8 m, long subaerial exposure times (>3.5 hrs, prolonged exposure to high SST and fluctuating turbidity levels. We conclude the timing of low tide in the coolest parts of the day ameliorates the severity of subaerial exposure, and the combination of strong currents and a naturally high sediment regime helps to offset light and heat stress. The low level of anthropogenic impact and proximity to the Indo-west Pacific centre of diversity are likely to further promote resistance and resilience in this community. This assemblage provides an indication of what corals may have existed in other nearshore locations in the past prior to widespread coastal development, eutrophication, coral predator and disease outbreaks and coral bleaching events. Our results call for a re-evaluation of what conditions are optimal for coral survival, and the Bonaparte intertidal community presents an ideal model system for exploring how species resilience is conferred in the absence of confounding factors such as pollution.

Black reefs: iron-induced phase shifts on coral reefs.

Science.gov (United States)

Kelly, Linda Wegley; Barott, Katie L; Dinsdale, Elizabeth; Friedlander, Alan M; Nosrat, Bahador; Obura, David; Sala, Enric; Sandin, Stuart A; Smith, Jennifer E; Vermeij, Mark J A; Williams, Gareth J; Willner, Dana; Rohwer, Forest

2012-03-01

The Line Islands are calcium carbonate coral reef platforms located in iron-poor regions of the central Pacific. Natural terrestrial run-off of iron is non-existent and aerial deposition is extremely low. However, a number of ship groundings have occurred on these atolls. The reefs surrounding the shipwreck debris are characterized by high benthic cover of turf algae, macroalgae, cyanobacterial mats and corallimorphs, as well as particulate-laden, cloudy water. These sites also have very low coral and crustose coralline algal cover and are call black reefs because of the dark-colored benthic community and reduced clarity of the overlying water column. Here we use a combination of benthic surveys, chemistry, metagenomics and microcosms to investigate if and how shipwrecks initiate and maintain black reefs. Comparative surveys show that the live coral cover was reduced from 40 to 60% to reefs on Millennium, Tabuaeran and Kingman. These three sites are relatively large (>0.75 km(2)). The phase shift occurs rapidly; the Kingman black reef formed within 3 years of the ship grounding. Iron concentrations in algae tissue from the Millennium black reef site were six times higher than in algae collected from reference sites. Metagenomic sequencing of the Millennium Atoll black reef-associated microbial community was enriched in iron-associated virulence genes and known pathogens. Microcosm experiments showed that corals were killed by black reef rubble through microbial activity. Together these results demonstrate that shipwrecks and their associated iron pose significant threats to coral reefs in iron-limited regions.

Project Overview: A Reef Manager's Guide to Coral Bleaching ...

Science.gov (United States)

The purpose of this report is to provide the latest scientific knowledge and discuss available management options to assist local and regional managers in responding effectively to mass coral bleaching events. Background A Reef Manager’s Guide to Coral Bleaching is the result of a collaborative effort by over 50 scientists and managers to: (1) share the best available scientific information on climate-related coral bleaching; and (2) compile a tool kit of currently available strategies for adaptive management of coral reefs in a changing climate. The result is a compendium of current information, tools, and practical suggestions to aid managers in their efforts to protect reefs in a way that maximizes reef resilience in the face of continuing climate change. The Guide is a joint publication of the National Oceanic and Atmospheric Administration, the Great Barrier Reef Marine Park Authority, and The World Conservation Union, with author contributions from a variety of international partners from government agencies, non-governmental organizations, and academic institutions. EPA’s Office of Research and Development was a major contributor to the Guide through authorship and participation in the final review and editing process for the entire report. A Reef Manager’s Guide to Coral Bleaching is the result of a collaborative effort by over 50 scientists and managers to: (1) share the best available scientific information on climate-related coral blea

Coral mucus functions as an energy carrier and particle trap in the reef ecosystem

DEFF Research Database (Denmark)

Wild, C.; Huettel, M.; Klueter, A.

2004-01-01

Zooxanthellae, endosymbiotic algae of reef-building corals, substantially contribute to the high gross primary production of coral reefs(1), but corals exude up to half of the carbon assimilated by their zooxanthellae as mucus(2,3). Here we show that released coral mucus efficiently traps organic...... matter from the water column and rapidly carries energy and nutrients to the reef lagoon sediment, which acts as a biocatalytic mineralizing filter. In the Great Barrier Reef, the dominant genus of hard corals, Acropora, exudes up to 4.8 litres of mucus per square metre of reef area per day. Between 56......% and 80% of this mucus dissolves in the reef water, which is filtered through the lagoon sands. Here, coral mucus is degraded at a turnover rate of at least 7% per hour. Detached undissolved mucus traps suspended particles, increasing its initial organic carbon and nitrogen content by three orders...

Differences in demographic traits of four butterflyfish species between two reefs of the Great Barrier Reef separated by 1,200 km

KAUST Repository

Berumen, Michael L.

2011-11-16

Many species demonstrate variation in life history attributes in response to gradients in environmental conditions. For fishes, major drivers of life history variation are changes in temperature and food availability. This study examined large-scale variation in the demography of four species of butterflyfishes (Chaetodon citrinellus, Chaetodon lunulatus, Chaetodon melannotus, and Chaetodon trifascialis) between two locations on Australia\\'s Great Barrier Reef (Lizard Island and One Tree Island, separated by approximately 1,200 km). Variation in age-based demographic parameters was assessed using the re-parameterised von Bertalanffy growth function. All species displayed measurable differences in body size between locations, with individuals achieving a larger adult size at the higher latitude site (One Tree Island) for three of the four species examined. Resources and abundances of the study species were also measured, revealing some significant differences between locations. For example, for C. trifascialis, there was no difference in its preferred resource or in abundance between locations, yet it achieved a larger body size at the higher latitude location, suggesting a response to temperature. For some species, resources and abundances did vary between locations, limiting the ability to distinguish between a demographic response to temperature as opposed to a response to food or competition. Future studies of life histories and demographics at large spatial scales will need to consider the potentially confounding roles of temperature, resource usage and availability, and abundance/competition to disentangle the effects of these environmental variables. © 2011 Springer-Verlag.

A Modern Sr/Ca-δ18O-Sea Surface Temperature Calibration for Isopora Corals in the Great Barrier Reef

Science.gov (United States)

Brenner, L. D.; Linsley, B. K.; Potts, D. C.

2014-12-01

Most coral-based paleoceanographic studies have used massive colonies of Porites or Faviidae, due to their long, continuously accreted skeletal records and sub-annual resolution, but other sub-massive corals provide an untapped resource. The genus Isopora is a dominant reef builder in some high-energy environments in the tropical western Pacific, and was a major component of cores recovered on IODP Leg 325 off the Great Barrier Reef (GBR). Despite its abundance, Isopora remains largely unexplored and hence underutilized in paleoceanographic studies. We present a modern Sr/Ca-δ18O-Sea Surface Temperature (SST) calibration of modern Isopora corals (n=3) collected from inner and outer reef locations ranging from 1-13m depth by Heron Island in the southern GBR in 2012. Pairing the Isopora Sr/Ca record with monthly SST yielded an average relationship of SST=-11.48×(Sr/Ca)+131.1 (r2 = 0.42-0.78). The Sr/Ca sensitivity of -0.087 mmol/mol/°C is similar to the sensitivity for Porites that was corrected for tissue layer smoothing effects determined by Gagan et al. (2012). The similarity between our Sr/Ca-SST sensitivity and the corrected sensitivity for Porites suggests tissue layer effects are minimal in Isopora. The mean annual SST amplitude recorded by the corals from 2008-2011 (full annual cycles) was 5.3°C and the average δ18O annual cycle of 1.1‰ approximates that expected if salinity had little effect on coral δ18O, assuming a previously established conversion of -0.23‰ (δ18O)/°C for biogenic aragonite. The average annual salinity amplitude of 0.3 in gridded data from around Heron Island supports our conclusion that δ18O variability is forced almost completely by SST. This modern Sr/Ca-SST calibration will expand the paleoceanographic utility of Isopora and, by assisting interpretation of Sr/Ca data from fossil corals collected during IODP 325, will better constrain the timing and magnitude of sea level changes and surface conditions since the Last

Sedimentary and environmental history of the Late Permian Bonikowo Reef (Zechstein Limestone, Wuchiapingian, western Poland

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Paweł Raczyński

2017-07-01

Full Text Available The Bonikowo Reef occurs in the central part of the Zechstein Limestone Basin in western Poland and was growing on the topmost edges of tilted blocks and/or on the top of uplifted horsts of the Brandenburg–Wolsztyn–Pogorzela High. Its size is ca. 1.6 km2. The Bonikowo Reef shows the thickest reef section (90.5 m recorded in the High. The Zechstein Limestone unit is represented mostly by limestones, often thoroughly recrystallized, although the macrotextures and biota of the boundstone are identifiable in most cases. The drillcore section is a mixture of boundstones (microbial and bryozoan, wackestones, packstones and grainstones, which often co-occur. The δ13C and δ18O values for both calcite (avg. 3.8 ± 0.8‰ and −3.4 ± 1.7‰, respectively and dolomite (avg. 3.5 ± 0.7‰ and −5.2 ± 1.3‰, respectively are transitional between the values previously reported for condensed sequences of the basinal facies and larger reef complexes. The biofacies of the Bonikowo Reef are very similar to those recognized in other reefs of the Brandenburg–Wolsztyn–Pogorzela High, which owe their origin to the destruction of bryozoan boundstones. The biota composition is typical and characteristic of other Zechstein Limestone reefs. However, the Bonikowo Reef demonstrates the importance of microbialites, laminar and nodose encrustations, in the growth and cohesion of the Zechstein Limestone reefs. Such encrustations abound within the Zechstein Limestone although, in many cases, the real nature of the encrustations is difficult to ascertain. These laminated encrustations show great similarity to Archaeolithoporella that is one of the most important Permian reef-building organisms. The encrustations considered to represent Archaeolithoporella were also previously recorded in the Zechstein Limestone of western Poland and in its stratigraphic equivalent, the Middle Magnesian Limestone of Northeast England. The lower part of the sequence shows

Retention of habitat complexity minimizes disassembly of reef fish communities following disturbance: a large-scale natural experiment.

Directory of Open Access Journals (Sweden)

Michael J Emslie

Full Text Available High biodiversity ecosystems are commonly associated with complex habitats. Coral reefs are highly diverse ecosystems, but are under increasing pressure from numerous stressors, many of which reduce live coral cover and habitat complexity with concomitant effects on other organisms such as reef fishes. While previous studies have highlighted the importance of habitat complexity in structuring reef fish communities, they employed gradient or meta-analyses which lacked a controlled experimental design over broad spatial scales to explicitly separate the influence of live coral cover from overall habitat complexity. Here a natural experiment using a long term (20 year, spatially extensive (∼ 115,000 kms(2 dataset from the Great Barrier Reef revealed the fundamental importance of overall habitat complexity for reef fishes. Reductions of both live coral cover and habitat complexity had substantial impacts on fish communities compared to relatively minor impacts after major reductions in coral cover but not habitat complexity. Where habitat complexity was substantially reduced, species abundances broadly declined and a far greater number of fish species were locally extirpated, including economically important fishes. This resulted in decreased species richness and a loss of diversity within functional groups. Our results suggest that the retention of habitat complexity following disturbances can ameliorate the impacts of coral declines on reef fishes, so preserving their capacity to perform important functional roles essential to reef resilience. These results add to a growing body of evidence about the importance of habitat complexity for reef fishes, and represent the first large-scale examination of this question on the Great Barrier Reef.

The ugly face of tourism: Marine debris pollution linked to visitation in the southern Great Barrier Reef, Australia.

Science.gov (United States)

Wilson, Scott P; Verlis, Krista M

2017-04-15

Marine debris is one of the most significant issues facing oceans worldwide. The sources of this debris vary depending on proximity to urban centres and the nature of activities within an area. This paper examines the influence of tourism in the southern Great Barrier Reef (GBR), and its contribution to litter levels in the region. By conducting beach debris surveys on occupied and unoccupied islands, this study found that debris was prevalent throughout the region with significant differences in material types between locations. The greatest source of debris from publically accessible islands was tourist-related, with this source also influencing debris loads on nearby uninhabited islands. A focus on debris at Heron Island, showed that sites close to amenities had greater levels of tourist-sourced items like cigarette butts. These findings indicate the contribution of tourists to this problem and that working with operators and managers is needed to minimise visitor impacts. Copyright © 2017 Elsevier Ltd. All rights reserved.

Energetic differences between bacterioplankton trophic groups and coral reef resistance.

Science.gov (United States)

McDole Somera, Tracey; Bailey, Barbara; Barott, Katie; Grasis, Juris; Hatay, Mark; Hilton, Brett J; Hisakawa, Nao; Nosrat, Bahador; Nulton, James; Silveira, Cynthia B; Sullivan, Chris; Brainard, Russell E; Rohwer, Forest

2016-04-27

Coral reefs are among the most productive and diverse marine ecosystems on the Earth. They are also particularly sensitive to changing energetic requirements by different trophic levels. Microbialization specifically refers to the increase in the energetic metabolic demands of microbes relative to macrobes and is significantly correlated with increasing human influence on coral reefs. In this study, metabolic theory of ecology is used to quantify the relative contributions of two broad bacterioplankton groups, autotrophs and heterotrophs, to energy flux on 27 Pacific coral reef ecosystems experiencing human impact to varying degrees. The effective activation energy required for photosynthesis is lower than the average energy of activation for the biochemical reactions of the Krebs cycle, and changes in the proportional abundance of these two groups can greatly affect rates of energy and materials cycling. We show that reef-water communities with a higher proportional abundance of microbial autotrophs expend more metabolic energy per gram of microbial biomass. Increased energy and materials flux through fast energy channels (i.e. water-column associated microbial autotrophs) may dampen the detrimental effects of increased heterotrophic loads (e.g. coral disease) on coral reef systems experiencing anthropogenic disturbance. © 2016 The Author(s).

Structural and Psycho-Social Limits to Climate Change Adaptation in the Great Barrier Reef Region.

Science.gov (United States)

Evans, Louisa S; Hicks, Christina C; Adger, W Neil; Barnett, Jon; Perry, Allison L; Fidelman, Pedro; Tobin, Renae

2016-01-01

Adaptation, as a strategy to respond to climate change, has limits: there are conditions under which adaptation strategies fail to alleviate impacts from climate change. Research has primarily focused on identifying absolute bio-physical limits. This paper contributes empirical insight to an emerging literature on the social limits to adaptation. Such limits arise from the ways in which societies perceive, experience and respond to climate change. Using qualitative data from multi-stakeholder workshops and key-informant interviews with representatives of the fisheries and tourism sectors of the Great Barrier Reef region, we identify psycho-social and structural limits associated with key adaptation strategies, and examine how these are perceived as more or less absolute across levels of organisation. We find that actors experience social limits to adaptation when: i) the effort of pursuing a strategy exceeds the benefits of desired adaptation outcomes; ii) the particular strategy does not address the actual source of vulnerability, and; iii) the benefits derived from adaptation are undermined by external factors. We also find that social limits are not necessarily more absolute at higher levels of organisation: respondents perceived considerable opportunities to address some psycho-social limits at the national-international interface, while they considered some social limits at the local and regional levels to be effectively absolute.

Understanding Recreational Fishers' Compliance with No-take Zones in the Great Barrier Reef Marine Park

Directory of Open Access Journals (Sweden)

Adrian Arias

2013-12-01

Full Text Available Understanding fishers' compliance is essential for the successful management of marine protected areas. We used the random response technique (RRT to assess recreational fishers' compliance with no-take zones in the Great Barrier Reef Marine Park (GBRMP. The RRT allowed the asking of a sensitive question, i.e., "Did you, knowingly, fish within in a Green Zone during the last 12 months?" while protecting respondents' confidentiality. Application of the RRT through a survey of recreational fishers indicated that the majority of recreational fishers, 90%, comply with no-take zones. Likewise, most fishers, 92%, reported not personally knowing anyone who had intentionally fished in a no-take zone, indicating that fishers' perceive high levels of compliance among their peers. Fishers were motivated to comply with no-take zones primarily by their beliefs about penalties for noncompliance, followed by beliefs about the fishery benefits of no-take zones. Results suggest that compliance-related communication efforts by the managing authority have partially succeeded in maintaining appropriate compliance levels and that future efforts should accentuate normative compliance drivers that will encourage voluntary compliance. We conclude that compliance monitoring should be integrated into the adaptive management of the GBRMP and other protected areas; in this case social surveys using the RRT are effective tools.

Avoiding Implementation Failure in Catchment Landscapes: A Case Study in Governance of the Great Barrier Reef.

Science.gov (United States)

Dale, Allan P; Vella, Karen; Gooch, Margaret; Potts, Ruth; Pressey, Robert L; Brodie, Jon; Eberhard, Rachel

2017-10-04

Water quality outcomes affecting Australia's Great Barrier Reef (GBR) are governed by multi-level and multi-party decision-making that influences forested and agricultural landscapes. With international concern about the GBR's declining ecological health, this paper identifies and focuses on implementation failure (primarily at catchment scale) as a systemic risk within the overall GBR governance system. There has been limited integrated analysis of the full suite of governance subdomains that often envelop defined policies, programs and delivery activities that influence water quality in the GBR. We consider how the implementation of separate purpose-specific policies and programs at catchment scale operate against well-known, robust design concepts for integrated catchment governance. We find design concerns within ten important governance subdomains that operate within GBR catchments. At a whole-of-GBR scale, we find a weak policy focus on strengthening these delivery-oriented subdomains and on effort integration across these subdomains within catchments. These governance problems when combined may contribute to failure in the implementation of major national, state and local government policies focused on improving water quality in the GBR, a lesson relevant to landscapes globally.

Contrasting movements and connectivity of reef-associated sharks using acoustic telemetry: implications for management.

Science.gov (United States)

Espinoza, Mario; Lédée, Elodie J I; Simpfendorfer, Colin A; Tobin, Andrew J; Heupel, Michelle R

2015-12-01

Understanding the efficacy of marine protected areas (MPAs) for wide-ranging predators is essential to designing effective management and conservation approaches. The use of acoustic monitoring and network analysis can improve our understanding of the spatial ecology and functional connectivity of reef-associated species, providing a useful approach for reef-based conservation planning. This study compared and contrasted the movement and connectivity of sharks with different degrees of reef association. We examined the residency, dispersal, degree of reef connectivity, and MPA use of grey reef (Carcharhinus amblyrhynchos), silvertip (C. albimarginatus), and bull (C. leucas) sharks monitored in the central Great Barrier Reef (GBR). An array of 56 acoustic receivers was used to monitor shark movements on 17 semi-isolated reefs. Carcharhinus amblyrhynchos and C. albimarginatus were detected most days at or near their tagging reef. However, while C. amblyrhynchos spent 80% of monitoring days in the array, C. albimarginatus was only detected 50% of the time. Despite both species moving similar distances (sharks like C. leucas, a combination of spatial planning and other alternative measures is critical. Our findings demonstrate that acoustic monitoring can serve as a useful platform for designing more effective MPA networks for reef predators displaying a range of movement patterns.

Flinders Reef Extension, Density, and Calcification Data for 1718 to 1991

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Extension, Density, and Calcification data from 35 Porites coral cores covering the entire length of the Great Barrier Reef, Australia. Data set contains 35...

Yankee Reef Extension, Density, and Calcification Data for 1888 to 1984

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Extension, Density, and Calcification data from 35 Porites coral cores covering the entire length of the Great Barrier Reef, Australia. Data set contains 35...

Agincourt Reef Extension, Density, and Calcification Data for 1779 to 1988

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Extension, Density, and Calcification data from 35 Porites coral cores covering the entire length of the Great Barrier Reef, Australia. Data set contains 35...

Stanley Reef Extension, Density, and Calcification Data for 1912 to 1985

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Extension, Density, and Calcification data from 35 Porites coral cores covering the entire length of the Great Barrier Reef, Australia. Data set contains 35...

Otter Reef Extension, Density, and Calcification Data for 1792 to 1987

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Extension, Density, and Calcification data from 35 Porites coral cores covering the entire length of the Great Barrier Reef, Australia. Data set contains 35...

Pandora Reef Extension, Density, and Calcification Data for 1875 to 1982

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Extension, Density, and Calcification data from 35 Porites coral cores covering the entire length of the Great Barrier Reef, Australia. Data set contains 35...

Rib Reef Extension, Density, and Calcification Data for 1853 to 1983

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Extension, Density, and Calcification data from 35 Porites coral cores covering the entire length of the Great Barrier Reef, Australia. Data set contains 35...

Britomart Reef Extension, Density, and Calcification Data for 1574 to 1986

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Extension, Density, and Calcification data from 35 Porites coral cores covering the entire length of the Great Barrier Reef, Australia. Data set contains 35...

Abraham Reef Extension, Density, and Calcification Data for 1479 to 1985

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Extension, Density, and Calcification data from 35 Porites coral cores covering the entire length of the Great Barrier Reef, Australia. Data set contains 35...

Wheeler Reef Extension, Density, and Calcification Data for 1744 to 1984

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Extension, Density, and Calcification data from 35 Porites coral cores covering the entire length of the Great Barrier Reef, Australia. Data set contains 35...

Sanctuary Reef Extension, Density, and Calcification Data for 1501 to 1984

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Extension, Density, and Calcification data from 35 Porites coral cores covering the entire length of the Great Barrier Reef, Australia. Data set contains 35...

Estimating the Exposure of Coral Reefs and Seagrass Meadows to Land-Sourced Contaminants in River Flood Plumes of the Great Barrier Reef: Validating a Simple Satellite Risk Framework with Environmental Data

Directory of Open Access Journals (Sweden)

Caroline Petus

2016-03-01

Full Text Available River runoff and associated flood plumes (hereafter river plumes are a major source of land-sourced contaminants to the marine environment, and are a significant threat to coastal and marine ecosystems worldwide. Remote sensing monitoring products have been developed to map the spatial extent, composition and frequency of occurrence of river plumes in the Great Barrier Reef (GBR, Australia. There is, however, a need to incorporate these monitoring products into Risk Assessment Frameworks as management decision tools. A simple Satellite Risk Framework has been recently proposed to generate maps of potential risk to seagrass and coral reef ecosystems in the GBR focusing on the Austral tropical wet season. This framework was based on a “magnitude × likelihood” risk management approach and GBR plume water types mapped from satellite imagery. The GBR plume water types (so called “Primary” for the inshore plume waters, “Secondary” for the midshelf-plume waters and “Tertiary” for the offshore plume waters represent distinct concentrations and combinations of land-sourced and marine contaminants. The current study aimed to test and refine the methods of the Satellite Risk Framework. It compared predicted pollutant concentrations in plume water types (multi-annual average from 2005–2014 to published ecological thresholds, and combined this information with similarly long-term measures of seagrass and coral ecosystem health. The Satellite Risk Framework and newly-introduced multi-annual risk scores were successful in demonstrating where water conditions were, on average, correlated to adverse biological responses. Seagrass meadow abundance (multi-annual change in % cover was negatively correlated to the multi-annual risk score at the site level (R2 = 0.47, p < 0.05. Relationships between multi-annual risk scores and multi-annual changes in proportional macroalgae cover (as an index for coral reef health were more complex (R2 = 0.04, p

Movement patterns of silvertip sharks ( Carcharhinus albimarginatus) on coral reefs

Science.gov (United States)

Espinoza, Mario; Heupel, Michelle. R.; Tobin, Andrew J.; Simpfendorfer, Colin A.

2015-09-01

Understanding how sharks use coral reefs is essential for assessing risk of exposure to fisheries, habitat loss, and climate change. Despite a wide Indo-Pacific distribution, little is known about the spatial ecology of silvertip sharks ( Carcharhinus albimarginatus), compromising the ability to effectively manage their populations. We examined the residency and movements of silvertip sharks in the central Great Barrier Reef (GBR). An array of 56 VR2W acoustic receivers was used to monitor shark movements on 17 semi-isolated reefs. Twenty-seven individuals tagged with acoustic transmitters were monitored from 70 to 731 d. Residency index to the study site ranged from 0.05 to 0.97, with a mean residency (±SD) of 0.57 ± 0.26, but most individuals were detected at or near their tagging reef. Clear seasonal patterns were apparent, with fewer individuals detected between September and February. A large proportion of the tagged population (>71 %) moved regularly between reefs. Silvertip sharks were detected less during daytime and exhibited a strong diel pattern in depth use, which may be a strategy for optimizing energetic budgets and foraging opportunities. This study provides the first detailed examination of the spatial ecology and behavior of silvertip sharks on coral reefs. Silvertip sharks remained resident at coral reef habitats over long periods, but our results also suggest this species may have more complex movement patterns and use larger areas of the GBR than common reef shark species. Our findings highlight the need to further understand the movement ecology of silvertip sharks at different spatial and temporal scales, which is critical for developing effective management approaches.

The role of marine reserves in the replenishment of a locally-impacted population of anemonefish on the Great Barrier Reef

KAUST Repository

Bonin, Mary C.; Harrison, Hugo B.; Williamson, David H.; Frisch, Ashley J.; Saenz Agudelo, Pablo; Berumen, Michael L.; Jones, Geoffrey P.

2015-01-01

The development of parentage analysis to track the dispersal of juvenile offspring has given us unprecedented insight into the population dynamics of coral reef fishes. These tools now have the potential to inform fisheries management and species conservation, particularly for small fragmented populations under threat from exploitation and disturbance. In this study we resolve patterns of larval dispersal for a population of the anemonefish Amphiprion melanopus in the Keppel Islands (southern Great Barrier Reef). Habitat loss and fishing appear to have impacted this population and a network of no-take marine reserves currently protects 75% of the potential breeders. Using parentage analysis, we estimate that 21% of recruitment in the island group was generated locally, and that breeding adults living in reserves were responsible for 79% (31 out of 39) of these of locally-produced juveniles. Overall, the network of reserves was fully connected via larval dispersal; however one reserve was identified as a critical source of larvae for the island group. The population in the Keppel Islands also appears to be well-connected to other source populations at least 60 km away, given that 79% (145 out of 184) of the juveniles sampled remained unassigned in the parentage analysis. We estimated the effective size of the A. melanopus metapopulation to be 745 (582-993 95% CI) and recommend continued monitoring of its genetic status. Maintaining connectivity with populations beyond the Keppel Islands and recovery of local recruitment habitat, potentially through active restoration of host anemone populations, will be important for its long-term persistence.

The role of marine reserves in the replenishment of a locally-impacted population of anemonefish on the Great Barrier Reef

KAUST Repository

Bonin, Mary C.

2015-11-21

The development of parentage analysis to track the dispersal of juvenile offspring has given us unprecedented insight into the population dynamics of coral reef fishes. These tools now have the potential to inform fisheries management and species conservation, particularly for small fragmented populations under threat from exploitation and disturbance. In this study we resolve patterns of larval dispersal for a population of the anemonefish Amphiprion melanopus in the Keppel Islands (southern Great Barrier Reef). Habitat loss and fishing appear to have impacted this population and a network of no-take marine reserves currently protects 75% of the potential breeders. Using parentage analysis, we estimate that 21% of recruitment in the island group was generated locally, and that breeding adults living in reserves were responsible for 79% (31 out of 39) of these of locally-produced juveniles. Overall, the network of reserves was fully connected via larval dispersal; however one reserve was identified as a critical source of larvae for the island group. The population in the Keppel Islands also appears to be well-connected to other source populations at least 60 km away, given that 79% (145 out of 184) of the juveniles sampled remained unassigned in the parentage analysis. We estimated the effective size of the A. melanopus metapopulation to be 745 (582-993 95% CI) and recommend continued monitoring of its genetic status. Maintaining connectivity with populations beyond the Keppel Islands and recovery of local recruitment habitat, potentially through active restoration of host anemone populations, will be important for its long-term persistence.

Partial pressure (or fugacity) of carbon dioxide, salinity and other variables collected from underway - surface observations using Carbon dioxide (CO2) gas analyzer, Shower head chamber equilibrator for autonomous carbon dioxide (CO2) measurement and other instruments from the L'ASTROLABE in the Indian Ocean, South Pacific Ocean and Tasman Sea from 2011-10-22 to 2011-12-11 (NODC Accession 0115180)

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — NODC Accession 0115180 includes chemical, meteorological, physical and underway - surface data collected from L'ASTROLABE in the Indian Ocean, South Pacific Ocean...

Diffusive boundary layers and photosynthesis of the epilithic algal community of coral reefs

DEFF Research Database (Denmark)

Larkum, Anthony W.D.; Koch, Eva-Maria W.; Kühl, Michael

2003-01-01

The effects of mass transfer resistance due to the presence of a diffusive boundary layer on the photosynthesis of the epilithic algal community (EAC) of a coral reef were studied. Photosynthesis and respiration of the EAC of dead coral surfaces were investigated for samples from two locations......: the Gulf of Aqaba, Eilat (Israel), and One Tree Reef on the Great Barrier Reef (Australia). Microsensors were used to measure O2 and pH at the EAC surface and above. Oxygen profiles in the light and dark indicated a diffusive boundary layer (DBL) thickness of 180–590 µm under moderate flow (~0.08 m s-1...

Partial pressure (or fugacity) of carbon dioxide, salinity and other variables collected from Surface underway observations using Carbon dioxide (CO2) gas analyzer, Shower head chamber equilibrator for autonomous carbon dioxide (CO2) measurement and other instruments from the L'ASTROLABE in the Indian Ocean, South Pacific Ocean and Tasman Sea from 2008-10-21 to 2011-03-05 (NODC Accession 0117499)

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — NODC Accession 0117499 includes Surface underway, chemical, meteorological and physical data collected from L'ASTROLABE in the Indian Ocean, South Pacific Ocean and...

Temporary refugia for coral reefs in a warming world

Science.gov (United States)

van Hooidonk, R.; Maynard, J. A.; Planes, S.

2013-05-01

Climate-change impacts on coral reefs are expected to include temperature-induced spatially extensive bleaching events. Bleaching causes mortality when temperature stress persists but exposure to bleaching conditions is not expected to be spatially uniform at the regional or global scale. Here we show the first maps of global projections of bleaching conditions based on ensembles of IPCC AR5 (ref. ) models forced with the new Representative Concentration Pathways (RCPs). For the three RCPs with larger CO2 emissions (RCP 4.5, 6.0 and 8.5) the onset of annual bleaching conditions is associated with ~ 510ppm CO2 equivalent; the median year of all locations is 2040 for the fossil-fuel aggressive RCP 8.5. Spatial patterns in the onset of annual bleaching conditions are similar for each of the RCPs. For RCP 8.5, 26% of reef cells are projected to experience annual bleaching conditions more than 5 years later than the median. Some of these temporary refugia include the western Indian Ocean, Thailand, the southern Great Barrier Reef and central French Polynesia. A reduction in the growth of greenhouse-gas emissions corresponding to the difference between RCP 8.5 and 6.0 delays annual bleaching in ~ 23% of reef cells more than two decades, which might conceivably increase the potential for these reefs to cope with these changes.

Inferring coastal processes from regional-scale mapping of 222Radon and salinity: examples from the Great Barrier Reef, Australia

International Nuclear Information System (INIS)

Stieglitz, Thomas C.; Cook, Peter G.; Burnett, William C.

2010-01-01

The radon isotope 222 Rn and salinity in coastal surface water were mapped on regional scales, to improve the understanding of coastal processes and their spatial variability. Radon was measured with a surface-towed, continuously recording multi-detector setup on a moving vessel. Numerous processes and locations of land-ocean interaction along the Central Great Barrier Reef coastline were identified and interpreted based on the data collected. These included riverine fluxes, terrestrially-derived fresh submarine groundwater discharge (SGD) and the tidal pumping of seawater through mangrove forests. Based on variations in the relationship of the tracers radon and salinity, some aspects of regional freshwater inputs to the coastal zone and to estuaries could be assessed. Concurrent mapping of radon and salinity allowed an efficient qualitative assessment of land-ocean interaction on various spatial and temporal scales, indicating that such surveys on coastal scales can be a useful tool to obtain an overview of SGD locations and processes.

Elevated temperatures and bleaching on a high latitude coral reef: the 1988 Bermuda event

Science.gov (United States)

Cook, Clayton B.; Logan, Alan; Ward, Jack; Luckhurst, Brian; Berg, Carl J.

1990-03-01

Sea temperatures were normal in Bermuda during 1987, when Bermuda escaped the episodes of coral bleaching which were prevalent throughout the Caribbean region. Survey transecs in 1988 on 4 6 m reefs located on the rim margin and on a lagoonal patch reef revealed bleaching only of zoanthids between May and July. Transect and tow surveys in August and September revealed bleaching of several coral species; Millepora alcicornis on rim reefs was the most extensively affected. The frequency of bleaching in this species, Montastrea annularis and perhaps Diploria labyrinthiformis was significantly higher on outer reefs than on inshore reefs. This bleaching period coincided with the longest period of elevated sea temperatures in Bermuda in 38 years (28.9 30.9°C inshore, >28° offshore). By December, when temperatures had returned to normal, bleaching of seleractinians continued, but bleaching of M. alcicornis on the outer reefs was greatly reduced. Our observations suggest that corals which normally experience wide temperature ranges are less sensitive to thermal stress, and that high-latitude reef corals are sensitive to elevated temperatures which are within the normal thermal range of corals at lower latitudes.

Project O.R.B (Operation Reef Ball): Creating Artificial Reefs, Educating the Community

Science.gov (United States)

Phipps, A.

2012-04-01

The Project O.R.B. (Operation Reef Ball) team at South Plantation High School's Everglades Restoration & Environmental Science Magnet Program is trying to help our ailing south Florida coral reefs by constructing, deploying, and monitoring designed artificial reefs. Students partnered with the Reef Ball Foundation, local concrete companies, state parks, Girl Scouts, Sea Scouts, local universities and environmental agencies to construct concrete reef balls, each weighing approximately 500 lbs (227 kg). Students then deployed two artificial reefs consisting of over 30 concrete reef balls in two sites previously permitted for artificial reef deployment. One artificial reef was placed approximately 1.5 miles (2.4 km) offshore of Golden Beach in Miami-Dade County with the assistance of Florida Atlantic University and their research vessel. A twin reef was deployed at the mouth of the river in Oleta River State Park in Miami. Monitoring and maintenance of the sites is ongoing with semi-annual reports due to the Reef Ball Foundation and DERM (Department of Environmental Resource Management) of Miami-Dade County. A second goal of Project O.R.B. is aligned with the Florida Local Action Strategy, the Southeast Florida Coral Reef Initiative, and the U.S. Coral Reef Task Force, all of which point out the importance of awareness and education as key components to the health of our coral reefs. Project O.R.B. team members developed and published an activity book targeting elementary school students. Outreach events incorporate cascade learning where high school students teach elementary and middle school students about various aspects of coral reefs through interactive "edu-tainment" modules. Attendees learn about water sampling, salinity, beach erosion, surface runoff, water cycle, ocean zones, anatomy of coral, human impact on corals, and characteristics of a well-designed artificial reef. Middle school students snorkel on the artificial reef to witness first-hand the success

Accretion history of mid-Holocene coral reefs from the southeast Florida continental reef tract, USA

Science.gov (United States)

Stathakopoulos, A.; Riegl, B. M.

2015-03-01

Sixteen new coral reef cores were collected to better understand the accretion history and composition of submerged relict reefs offshore of continental southeast (SE) Florida. Coral radiometric ages from three sites on the shallow inner reef indicate accretion initiated by 8,050 Cal BP and terminated by 5,640 Cal BP. The reef accreted up to 3.75 m of vertical framework with accretion rates that averaged 2.53 m kyr-1. The reef was composed of a nearly even mixture of Acropora palmata and massive corals. In many cases, cores show an upward transition from massives to A. palmata and may indicate local dominance by this species prior to reef demise. Quantitative macroscopic analyses of reef clasts for various taphonomic and diagenetic features did not correlate well with depth/environmental-related trends established in other studies. The mixed coral framestone reef lacks a classical Caribbean reef zonation and is best described as an immature reef and/or a series of fused patch reefs; a pattern that is evident in both cores and reef morphology. This is in stark contrast to the older and deeper outer reef of the SE Florida continental reef tract. Accretion of the outer reef lasted from 10,695-8,000 Cal BP and resulted in a larger and better developed structure that achieved a distinct reef zonation. The discrepancies in overall reef morphology and size as well as the causes of reef terminations remain elusive without further study, yet they likely point to different climatic/environmental conditions during their respective accretion histories.

Structural and Psycho-Social Limits to Climate Change Adaptation in the Great Barrier Reef Region.

Directory of Open Access Journals (Sweden)

Louisa S Evans

Full Text Available Adaptation, as a strategy to respond to climate change, has limits: there are conditions under which adaptation strategies fail to alleviate impacts from climate change. Research has primarily focused on identifying absolute bio-physical limits. This paper contributes empirical insight to an emerging literature on the social limits to adaptation. Such limits arise from the ways in which societies perceive, experience and respond to climate change. Using qualitative data from multi-stakeholder workshops and key-informant interviews with representatives of the fisheries and tourism sectors of the Great Barrier Reef region, we identify psycho-social and structural limits associated with key adaptation strategies, and examine how these are perceived as more or less absolute across levels of organisation. We find that actors experience social limits to adaptation when: i the effort of pursuing a strategy exceeds the benefits of desired adaptation outcomes; ii the particular strategy does not address the actual source of vulnerability, and; iii the benefits derived from adaptation are undermined by external factors. We also find that social limits are not necessarily more absolute at higher levels of organisation: respondents perceived considerable opportunities to address some psycho-social limits at the national-international interface, while they considered some social limits at the local and regional levels to be effectively absolute.

Topographical features of physiographic unit borders on reef flat in fringing reefs

OpenAIRE

Nakai, Tatsuo

2007-01-01

In coral reef ecosystem spatial structure of 10^1-10^3m scale provide very important aspect in coral reef conservation. Nakai (2007) showed that physiographic unit (PGU) could be set as well as zonation on reef flat of fringing reef. The borders of PGUs delimiting it from the open sea or an adjacent PGU are constituted by landforms such as reef crest or channels. In this article the landforms becoming the borders of PGUs were discussed and the PGU property was clarified.

Say what? Coral reef sounds as indicators of community assemblages and reef conditions

Science.gov (United States)

Mooney, T. A.; Kaplan, M. B.

2016-02-01

Coral reefs host some of the highest diversity of life on the planet. Unfortunately, reef health and biodiversity is declining or is threatened as a result of climate change and human influences. Tracking these changes is necessary for effective resource management, yet estimating marine biodiversity and tracking trends in ecosystem health is a challenging and expensive task, especially in many pristine reefs which are remote and difficult to access. Many fishes, mammals and invertebrates make sound. These sounds are reflective of a number of vital biological processes and are a cue for settling reef larvae. Biological sounds may be a means to quantify ecosystem health and biodiversity, however the relationship between coral reef soundscapes and the actual taxa present remains largely unknown. This study presents a comparative evaluation of the soundscape of multiple reefs, naturally differing in benthic cover and fish diversity, in the U.S. Virgin Islands National Park. Using multiple recorders per reef we characterized spacio-temporal variation in biological sound production within and among reefs. Analyses of sounds recorded over 4 summer months indicated diel trends in both fish and snapping shrimp acoustic frequency bands with crepuscular peaks at all reefs. There were small but statistically significant acoustic differences among sites on a given reef raising the possibility of potentially localized acoustic habitats. The strength of diel trends in lower, fish-frequency bands were correlated with coral cover and fish density, yet no such relationship was found with shrimp sounds suggesting that fish sounds may be of higher relevance to tracking certain coral reef conditions. These findings indicate that, in spite of considerable variability within reef soundscapes, diel trends in low-frequency sound production reflect reef community assemblages. Further, monitoring soundscapes may be an efficient means of establishing and monitoring reef conditions.

Marine protected areas increase resilience among coral reef communities.

Science.gov (United States)

Mellin, Camille; Aaron MacNeil, M; Cheal, Alistair J; Emslie, Michael J; Julian Caley, M

2016-06-01

With marine biodiversity declining globally at accelerating rates, maximising the effectiveness of conservation has become a key goal for local, national and international regulators. Marine protected areas (MPAs) have been widely advocated for conserving and managing marine biodiversity yet, despite extensive research, their benefits for conserving non-target species and wider ecosystem functions remain unclear. Here, we demonstrate that MPAs can increase the resilience of coral reef communities to natural disturbances, including coral bleaching, coral diseases, Acanthaster planci outbreaks and storms. Using a 20-year time series from Australia's Great Barrier Reef, we show that within MPAs, (1) reef community composition was 21-38% more stable; (2) the magnitude of disturbance impacts was 30% lower and (3) subsequent recovery was 20% faster that in adjacent unprotected habitats. Our results demonstrate that MPAs can increase the resilience of marine communities to natural disturbance possibly through herbivory, trophic cascades and portfolio effects. © 2016 John Wiley & Sons Ltd/CNRS.

The physiological response of two green calcifying algae from the Great Barrier Reef towards high dissolved inorganic and organic carbon (DIC and DOC availability.

Directory of Open Access Journals (Sweden)

Friedrich Wilhelm Meyer

Full Text Available Increasing dissolved inorganic carbon (DIC concentrations associated with ocean acidification can affect marine calcifiers, but local factors, such as high dissolved organic carbon (DOC concentrations through sewage and algal blooms, may interact with this global factor. For calcifying green algae of the genus Halimeda, a key tropical carbonate producer that often occurs in coral reefs, no studies on these interactions have been reported. These data are however urgently needed to understand future carbonate production. Thus, we investigated the independent and combined effects of DIC (pCO2 402 μatm/ pHtot 8.0 and 996 μatm/ pHtot 7.7 and DOC (added as glucose in 0 and 294 μmol L-1 on growth, calcification and photosynthesis of H. macroloba and H. opuntia from the Great Barrier Reef in an incubation experiment over 16 days. High DIC concentrations significantly reduced dark calcification of H. opuntia by 130 % and led to net dissolution, but did not affect H. macroloba. High DOC concentrations significantly reduced daily oxygen production of H. opuntia and H. macroloba by 78 % and 43 %, respectively, and significantly reduced dark calcification of H. opuntia by 70%. Combined high DIC and DOC did not show any interactive effects for both algae, but revealed additive effects for H. opuntia where the combination of both factors reduced dark calcification by 162 % compared to controls. Such species-specific differences in treatment responses indicate H. opuntia is more susceptible to a combination of high DIC and DOC than H. macroloba. From an ecological perspective, results further suggest a reduction of primary production for Halimeda-dominated benthic reef communities under high DOC concentrations and additional decreases of carbonate accretion under elevated DIC concentrations, where H. opuntia dominates the benthic community. This may reduce biogenic carbonate sedimentation rates and hence the buffering capacity against further ocean

The physiological response of two green calcifying algae from the Great Barrier Reef towards high dissolved inorganic and organic carbon (DIC and DOC) availability.

Science.gov (United States)

Meyer, Friedrich Wilhelm; Vogel, Nikolas; Teichberg, Mirta; Uthicke, Sven; Wild, Christian

2015-01-01

Increasing dissolved inorganic carbon (DIC) concentrations associated with ocean acidification can affect marine calcifiers, but local factors, such as high dissolved organic carbon (DOC) concentrations through sewage and algal blooms, may interact with this global factor. For calcifying green algae of the genus Halimeda, a key tropical carbonate producer that often occurs in coral reefs, no studies on these interactions have been reported. These data are however urgently needed to understand future carbonate production. Thus, we investigated the independent and combined effects of DIC (pCO2 402 μatm/ pHtot 8.0 and 996 μatm/ pHtot 7.7) and DOC (added as glucose in 0 and 294 μmol L-1) on growth, calcification and photosynthesis of H. macroloba and H. opuntia from the Great Barrier Reef in an incubation experiment over 16 days. High DIC concentrations significantly reduced dark calcification of H. opuntia by 130 % and led to net dissolution, but did not affect H. macroloba. High DOC concentrations significantly reduced daily oxygen production of H. opuntia and H. macroloba by 78 % and 43 %, respectively, and significantly reduced dark calcification of H. opuntia by 70%. Combined high DIC and DOC did not show any interactive effects for both algae, but revealed additive effects for H. opuntia where the combination of both factors reduced dark calcification by 162 % compared to controls. Such species-specific differences in treatment responses indicate H. opuntia is more susceptible to a combination of high DIC and DOC than H. macroloba. From an ecological perspective, results further suggest a reduction of primary production for Halimeda-dominated benthic reef communities under high DOC concentrations and additional decreases of carbonate accretion under elevated DIC concentrations, where H. opuntia dominates the benthic community. This may reduce biogenic carbonate sedimentation rates and hence the buffering capacity against further ocean acidification.

A modern Sr/Ca-δ18O-sea surface temperature calibration for Isopora corals on the Great Barrier Reef

Science.gov (United States)

Brenner, Logan D.; Linsley, Braddock K.; Potts, Donald C.

2017-02-01

Isopora (Acroporidae) is a genus of often encrusting, branching to submassive corals that are common in many shallow habitats on modern and fossil Indo-West Pacific reefs. Although abundant, Isopora is largely absent from paleoceanographic literature. The scarcity of large Porites and the abundance of Isopora retrieved from the Great Barrier Reef (GBR) on Integrated Ocean Drilling Program Expedition 325 focused paleoceanographic attention on Isopora. Here we provide the first independent high-resolution calibration of both Sr/Ca and δ18O for temperature analyses based on Isopora and demonstrate its consistency with Porites records. We developed modern skeletal Sr/Ca- and δ18O-sea surface temperature (SST) calibrations based on five modern Isopora colonies from Heron Island in the southern GBR. Pairing the coral Sr/Ca record with monthly SST data yielded Sr/Ca-SST sensitivities from -0.061 ± 0.004 (centered) to -0.083 ± 0.007 (raw) mmol/mol °C-1 based on reduced major axis regressions. These sensitivities are in the middle of the range of published Porites values and overlap most published values for Isopora, -0.075 ± 0.011 to -0.065 ± 0.011 mmol/mol °C-1. The δ18O-SST sensitivities range from -0.184 ± 0.014 (centered) to -0.185 ± 0.014 (raw) ‰ °C-1, assuming that all seasonal variation in δ18O was due to SST. These δ18O-SST sensitivities are smaller than the widely accepted value of -0.23‰ °C-1 for biogenic aragonite but are at the upper end of high-resolution Porites-defined sensitivities that are consistently less than the aforementioned established value. Our results validate the use of Isopora as an alternative source of paleoceanographic records in habitats where large massive Porites are scarce or absent.

Species Richness and Community Structure on a High Latitude Reef: Implications for Conservation and Management

Directory of Open Access Journals (Sweden)

Wayne Houston

2011-07-01

Full Text Available In spite of the wealth of research on the Great Barrier Reef, few detailed biodiversity assessments of its inshore coral communities have been conducted. Effective conservation and management of marine ecosystems begins with fine-scale biophysical assessments focused on diversity and the architectural species that build the structural framework of the reef. In this study, we investigate key coral diversity and environmental attributes of an inshore reef system surrounding the Keppel Bay Islands near Rockhampton in Central Queensland, Australia, and assess their implications for conservation and management. The Keppels has much higher coral diversity than previously found. The average species richness for the 19 study sites was ~40 with representatives from 68% of the ~244 species previously described for the southern Great Barrier Reef. Using scleractinian coral species richness, taxonomic distinctiveness and coral cover as the main criteria, we found that five out of 19 sites had particularly high conservation value. A further site was also considered to be of relatively high value. Corals at this site were taxonomically distinct from the others (representatives of two families were found here but not at other sites and a wide range of functionally diverse taxa were present. This site was associated with more stressful conditions such as high temperatures and turbidity. Highly diverse coral communities or biodiversity ‘hotspots’ and taxonomically distinct reefs may act as insurance policies for climatic disturbance, much like Noah’s Arks for reefs. While improving water quality and limiting anthropogenic impacts are clearly important management initiatives to improve the long-term outlook for inshore reefs, identifying, mapping and protecting these coastal ‘refugia’ may be the key for ensuring their regeneration against catastrophic climatic disturbance in the meantime.

Reef Development on Artificial Patch Reefs in Shallow Water of Panjang Island, Central Java

Science.gov (United States)

Munasik; Sugiyanto; Sugianto, Denny N.; Sabdono, Agus

2018-02-01

Reef restoration methods are generally developed by propagation of coral fragments, coral recruits and provide substrate for coral attachment using artificial reefs (ARs). ARs have been widely applied as a tool for reef restoration in degraded natural reefs. Successful of coral restoration is determined by reef development such as increasing coral biomass, natural of coral recruits and fauna associated. Artificial Patch Reefs (APRs) is designed by combined of artificial reefs and coral transplantation and constructed by modular circular structures in shape, were deployed from small boats by scuba divers, and are suitable near natural reefs for shallow water with low visibility of Panjang Island, Central Java. Branching corals of Acropora aspera, Montipora digitata and Porites cylindrica fragments were transplanted on to each module of two units of artificial patch reefs in different periods. Coral fragments of Acropora evolved high survival and high growth, Porites fragments have moderate survival and low growth, while fragment of Montipora show in low survival and moderate growth. Within 19 to 22 months of APRs deployment, scleractinian corals were recruited on the surface of artificial patch reef substrates. The most recruits abundant was Montastrea, followed by Poritids, Pocilloporids, and Acroporids. We conclude that artificial patch reefs with developed by coral fragments and natural coral recruitment is one of an alternative rehabilitation method in shallow reef with low visibility.

Gear and survey efficiency of patent tongs for oyster populations on restoration reefs.

Science.gov (United States)

Schulte, David M; Lipcius, Romuald N; Burke, Russell P

2018-01-01

Surveys of restored oyster reefs need to produce accurate population estimates to assess the efficacy of restoration. Due to the complex structure of subtidal oyster reefs, one effective and efficient means to sample is by patent tongs, rather than SCUBA, dredges, or bottom cores. Restored reefs vary in relief and oyster density, either of which could affect survey efficiency. This study is the first to evaluate gear (the first full grab) and survey (which includes selecting a specific half portion of the first grab for further processing) efficiencies of hand-operated patent tongs as a function of reef height and oyster density on subtidal restoration reefs. In the Great Wicomico River, a tributary of lower Chesapeake Bay, restored reefs of high- and low-relief (25-45 cm, and 8-12 cm, respectively) were constructed throughout the river as the first large-scale oyster sanctuary reef restoration effort (sanctuary acreage > 20 ha at one site) in Chesapeake Bay. We designed a metal frame to guide a non-hydraulic mechanical patent tong repeatedly into the same plot on a restored reef until all oysters within the grab area were captured. Full capture was verified by an underwater remotely-operated vehicle. Samples (n = 19) were taken on nine different reefs, including five low- (n = 8) and four high-relief reefs (n = 11), over a two-year period. The gear efficiency of the patent tong was estimated to be 76% (± 5% standard error), whereas survey efficiency increased to 81% (± 10%) due to processing. Neither efficiency differed significantly between young-of-the-year oysters (spat) and adults, high- and low-relief reefs, or years. As this type of patent tong is a common and cost-effective tool to evaluate oyster restoration projects as well as population density on fished habitat, knowing the gear and survey efficiencies allows for accurate and precise population estimates.

Habitat degradation negatively affects auditory settlement behavior of coral reef fishes.

Science.gov (United States)

Gordon, Timothy A C; Harding, Harry R; Wong, Kathryn E; Merchant, Nathan D; Meekan, Mark G; McCormick, Mark I; Radford, Andrew N; Simpson, Stephen D

2018-05-15

Coral reefs are increasingly degraded by climate-induced bleaching and storm damage. Reef recovery relies on recruitment of young fishes for the replenishment of functionally important taxa. Acoustic cues guide the orientation, habitat selection, and settlement of many fishes, but these processes may be impaired if degradation alters reef soundscapes. Here, we report spatiotemporally matched evidence of soundscapes altered by degradation from recordings taken before and after recent severe damage on Australia's Great Barrier Reef. Postdegradation soundscapes were an average of 15 dB re 1 µPa quieter and had significantly reduced acoustic complexity, richness, and rates of invertebrate snaps compared with their predegradation equivalents. We then used these matched recordings in complementary light-trap and patch-reef experiments to assess responses of wild fish larvae under natural conditions. We show that postdegradation soundscapes were 8% less attractive to presettlement larvae and resulted in 40% less settlement of juvenile fishes than predegradation soundscapes; postdegradation soundscapes were no more attractive than open-ocean sound. However, our experimental design does not allow an estimate of how much attraction and settlement to isolated postdegradation soundscapes might change compared with isolated predegradation soundscapes. Reductions in attraction and settlement were qualitatively similar across and within all trophic guilds and taxonomic groups analyzed. These patterns may lead to declines in fish populations, exacerbating degradation. Acoustic changes might therefore trigger a feedback loop that could impair reef resilience. To understand fully the recovery potential of coral reefs, we must learn to listen. Copyright © 2018 the Author(s). Published by PNAS.

Coral reef soundscapes may not be detectable far from the reef

Science.gov (United States)

Kaplan, Maxwell B.; Mooney, T. Aran

2016-08-01

Biological sounds produced on coral reefs may provide settlement cues to marine larvae. Sound fields are composed of pressure and particle motion, which is the back and forth movement of acoustic particles. Particle motion (i.e., not pressure) is the relevant acoustic stimulus for many, if not most, marine animals. However, there have been no field measurements of reef particle motion. To address this deficiency, both pressure and particle motion were recorded at a range of distances from one Hawaiian coral reef at dawn and mid-morning on three separate days. Sound pressure attenuated with distance from the reef at dawn. Similar trends were apparent for particle velocity but with considerable variability. In general, average sound levels were low and perhaps too faint to be used as an orientation cue except very close to the reef. However, individual transient sounds that exceeded the mean values, sometimes by up to an order of magnitude, might be detectable far from the reef, depending on the hearing abilities of the larva. If sound is not being used as a long-range cue, it might still be useful for habitat selection or other biological activities within a reef.

Residency and spatial use by reef sharks of an isolated seamount and its implications for conservation.

Science.gov (United States)

Barnett, Adam; Abrantes, Kátya G; Seymour, Jamie; Fitzpatrick, Richard

2012-01-01

Although marine protected areas (MPAs) are a common conservation strategy, these areas are often designed with little prior knowledge of the spatial behaviour of the species they are designed to protect. Currently, the Coral Sea area and its seamounts (north-east Australia) are under review to determine if MPAs are warranted. The protection of sharks at these seamounts should be an integral component of conservation plans. Therefore, knowledge on the spatial ecology of sharks at the Coral Sea seamounts is essential for the appropriate implementation of management and conservation plans. Acoustic telemetry was used to determine residency, site fidelity and spatial use of three shark species at Osprey Reef: whitetip reef sharks Triaenodon obesus, grey reef sharks Carcharhinus amblyrhynchos and silvertip sharks Carcharhinus albimarginatus. Most individuals showed year round residency at Osprey Reef, although five of the 49 individuals tagged moved to the neighbouring Shark Reef (~14 km away) and one grey reef shark completed a round trip of ~250 km to the Great Barrier Reef. Additionally, individuals of white tip and grey reef sharks showed strong site fidelity to the areas they were tagged, and there was low spatial overlap between groups of sharks tagged at different locations. Spatial use at Osprey Reef by adult sharks is generally restricted to the north-west corner. The high residency and limited spatial use of Osprey Reef suggests that reef sharks would be highly vulnerable to targeted fishing pressure and that MPAs incorporating no-take of sharks would be effective in protecting reef shark populations at Osprey and Shark Reef.

Residency and spatial use by reef sharks of an isolated seamount and its implications for conservation.

Directory of Open Access Journals (Sweden)

Adam Barnett

Full Text Available Although marine protected areas (MPAs are a common conservation strategy, these areas are often designed with little prior knowledge of the spatial behaviour of the species they are designed to protect. Currently, the Coral Sea area and its seamounts (north-east Australia are under review to determine if MPAs are warranted. The protection of sharks at these seamounts should be an integral component of conservation plans. Therefore, knowledge on the spatial ecology of sharks at the Coral Sea seamounts is essential for the appropriate implementation of management and conservation plans. Acoustic telemetry was used to determine residency, site fidelity and spatial use of three shark species at Osprey Reef: whitetip reef sharks Triaenodon obesus, grey reef sharks Carcharhinus amblyrhynchos and silvertip sharks Carcharhinus albimarginatus. Most individuals showed year round residency at Osprey Reef, although five of the 49 individuals tagged moved to the neighbouring Shark Reef (~14 km away and one grey reef shark completed a round trip of ~250 km to the Great Barrier Reef. Additionally, individuals of white tip and grey reef sharks showed strong site fidelity to the areas they were tagged, and there was low spatial overlap between groups of sharks tagged at different locations. Spatial use at Osprey Reef by adult sharks is generally restricted to the north-west corner. The high residency and limited spatial use of Osprey Reef suggests that reef sharks would be highly vulnerable to targeted fishing pressure and that MPAs incorporating no-take of sharks would be effective in protecting reef shark populations at Osprey and Shark Reef.

Residency and Spatial Use by Reef Sharks of an Isolated Seamount and Its Implications for Conservation

Science.gov (United States)

Barnett, Adam; Abrantes, Kátya G.; Seymour, Jamie; Fitzpatrick, Richard

2012-01-01

Although marine protected areas (MPAs) are a common conservation strategy, these areas are often designed with little prior knowledge of the spatial behaviour of the species they are designed to protect. Currently, the Coral Sea area and its seamounts (north-east Australia) are under review to determine if MPAs are warranted. The protection of sharks at these seamounts should be an integral component of conservation plans. Therefore, knowledge on the spatial ecology of sharks at the Coral Sea seamounts is essential for the appropriate implementation of management and conservation plans. Acoustic telemetry was used to determine residency, site fidelity and spatial use of three shark species at Osprey Reef: whitetip reef sharks Triaenodon obesus, grey reef sharks Carcharhinus amblyrhynchos and silvertip sharks Carcharhinus albimarginatus. Most individuals showed year round residency at Osprey Reef, although five of the 49 individuals tagged moved to the neighbouring Shark Reef (∼14 km away) and one grey reef shark completed a round trip of ∼250 km to the Great Barrier Reef. Additionally, individuals of white tip and grey reef sharks showed strong site fidelity to the areas they were tagged, and there was low spatial overlap between groups of sharks tagged at different locations. Spatial use at Osprey Reef by adult sharks is generally restricted to the north-west corner. The high residency and limited spatial use of Osprey Reef suggests that reef sharks would be highly vulnerable to targeted fishing pressure and that MPAs incorporating no-take of sharks would be effective in protecting reef shark populations at Osprey and Shark Reef. PMID:22615782

NOAA Coral Reef Watch Larval Connectivity, Florida Reef Tract

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Climate change threatens even the best-protected and most remote reefs. Reef recovery following catastrophic disturbance usually requires disturbed sites be reseeded...

Processes Driving Natural Acidification of Western Pacific Coral Reef Waters

Science.gov (United States)

Shamberger, K. E.; Cohen, A. L.; Golbuu, Y.; McCorkle, D. C.; Lentz, S. J.; Barkley, H. C.

2013-12-01

Rising levels of atmospheric carbon dioxide (CO2) are acidifying the oceans, reducing seawater pH, aragonite saturation state (Ωar) and the availability of carbonate ions (CO32-) that calcifying organisms use to build coral reefs. Today's most extensive reef ecosystems are located where open ocean CO32- concentration ([CO32-]) and Ωar exceed 200 μmol kg-1 and 3.3, respectively. However, high rates of biogeochemical cycling and long residence times of water can result in carbonate chemistry conditions within coral reef systems that differ greatly from those of nearby open ocean waters. In the Palauan archipelago, water moving across the reef platform is altered by both biological and hydrographic processes that combine to produce seawater pH, Ωar, [CO32-] significantly lower than that of open ocean source water. Just inshore of the barrier reefs, average Ωar values are 0.2 to 0.3 and pH values are 0.02 to 0.03 lower than they are offshore, declining further as water moves across the back reef, lagoon and into the meandering bays and inlets that characterize the Rock Islands. In the Rock Island bays, coral communities inhabit seawater with average Ωar values of 2.7 or less, and as low as 1.9. Levels of Ωar as low as these are not predicted to occur in the western tropical Pacific open ocean until near the end of the century. Calcification by coral reef organisms is the principal biological process responsible for lowering Ωar and pH, accounting for 68 - 99 % of the difference in Ωar between offshore source water and reef water at our sites. However, in the Rock Island bays where Ωar is lowest, CO2 production by net respiration contributes between 17 - 30 % of the difference in Ωar between offshore source water and reef water. Furthermore, the residence time of seawater in the Rock Island bays is much longer than at the well flushed exposed sites, enabling calcification and respiration to drive Ωar to very low levels despite lower net ecosystem

Inferring coastal processes from regional-scale mapping of {sup 222}Radon and salinity: examples from the Great Barrier Reef, Australia

Energy Technology Data Exchange (ETDEWEB)

Stieglitz, Thomas C., E-mail: thomas.stieglitz@jcu.edu.a [AIMS-JCU, Townsville (Australia); Australian Institute of Marine Science, PMB NO 3, Townsville QLD 4810 (Australia); School of Engineering and Physical Sciences, James Cook University, Townsville QLD 4811 (Australia); Cook, Peter G., E-mail: peter.g.cook@csiro.a [CSIRO Land and Water, Private Bag 2, Glen Osmond SA 5064 (Australia); Burnett, William C., E-mail: wburnett@mailer.fsu.ed [Department of Oceanography, Florida State University, Tallahassee, FL 32306 (United States)

2010-07-15

The radon isotope {sup 222}Rn and salinity in coastal surface water were mapped on regional scales, to improve the understanding of coastal processes and their spatial variability. Radon was measured with a surface-towed, continuously recording multi-detector setup on a moving vessel. Numerous processes and locations of land-ocean interaction along the Central Great Barrier Reef coastline were identified and interpreted based on the data collected. These included riverine fluxes, terrestrially-derived fresh submarine groundwater discharge (SGD) and the tidal pumping of seawater through mangrove forests. Based on variations in the relationship of the tracers radon and salinity, some aspects of regional freshwater inputs to the coastal zone and to estuaries could be assessed. Concurrent mapping of radon and salinity allowed an efficient qualitative assessment of land-ocean interaction on various spatial and temporal scales, indicating that such surveys on coastal scales can be a useful tool to obtain an overview of SGD locations and processes.

The significance of coral reefs as global carbon sinks - response to Greenhouse

Energy Technology Data Exchange (ETDEWEB)

Kinsey, D W; Hopley, D [Great Barrier Reef Marine Park Authority, Townsville, Qld. (Australia)

1991-03-01

Coral reefs are net sinks for C, principally as CaCO{sub 3} accretion. For the Great Barrier Reef (GBR) net production (G) 1 (kg CaCO{sub 3} m{sup -2} yr{sup -1}) for fringing reefs, G 1.9 for planar (infilled platform) reefs, and G 3 for ribbon reefs and lagoonal reefs is suggested. GBR is estimated to produce approximately 50 million tonnes yr{sup -1}. In a 50-100 year Greenhouse scenario of rising sealevel, recolonisation of present reef flats will be extensive. Production will increase perhaps by {approximately} 40% to give 70 million tonnes yr{sup -1} given a sealevel rise of 6-8 mm yr{sup -1}. An estimated 115,000 km{sup 2} of oceanic atolls worldwide, produce 160 million tonnes yr{sup -1}. A similar increase could be possible. Global reef production, at present {approximately} 900 million tonnes yr{sup -1}, could almost double to within the next 100 years. Long term (several centuries), the trend of recolonisation could result in the production of {gt}3000 million tonnes yr{sup -1} given a sealevel rise of 6-8 mm yr{sup -1}. However, the reefs could 'drown' if the sealevel rise significantly exceeds 6-8 mm yr{sup -1}. Coral reefs are a sink for 111 million tonnes C yr{sup -1}, the equivalent of 2% of anthropogenic CO{sub 2} output. This could increase to {approximately} 4% in the short term (100 years) and {approximately} 9% in the longer term. The immediate effect of CaCO{sub 3} precipitation is to raise the P{sub CO{sub 2}} of the surface oceans, giving a negative value in alleviating Greenhouse effects. Other Greenhouse changes e.g. increases in seawater temperature, and changes in dissolved CO{sub 2} concentration circulation may complicate the reef response. However, during the next 100 years, sealevel rise will be the dominant influence. 45 refs., 1 fig., 4 tabs.

A comparative study of modern carbonate mud in reefs and carbonate platforms: Mostly biogenic, some precipitated

Science.gov (United States)

Gischler, Eberhard; Dietrich, Sarah; Harris, Daniel; Webster, Jody M.; Ginsburg, Robert N.

2013-06-01

Carbonate mud from reefs and carbonate platforms in six locations of the Atlantic, Indian, and Pacific Oceans (Belize, Bahamas, Florida, the Maldives, French Polynesia, Great Barrier Reef) was systematically and quantitatively analyzed with regard to texture, composition, mineralogy, and geochemistry. Mud composition shows considerable variability, however, the data supports the contention that these muds are largely derived from the breakdown of skeletal grains and codiacean algae. Only mud from the Bahamas and northern Belize, areas which are characterized by common whitings, is interpreted to be mainly inorganically precipitated. Three grain-size fractions (63-20 μm, 20-4 μm, aragonite needles, nanograins, and coccoliths. Coccoliths are common in deeper lagoonal settings of the open ocean settings (Maldives, French Polynesia). The geochemistry of the aragonite contents and strontium concentrations, suggesting physico-chemical precipitation. The northern Belize and Great Barrier Reef samples show the highest magnesium calcite values and, accordingly, produced the lowest aragonite and strontium measurements. The high-magnesium calcite portion of the northern Belize mud is either precipitated or due to abundant micritized skeletal grains (e.g., foraminifera): more studies are needed to verify the origin. In the case of the Great Barrier Reef sample, coralline algae appear to be the source of abundant high-magnesium calcite. This study emphasizes that from a global perspective, modern muds in reefs and carbonate platforms exhibit different compositions but are in many cases biologically derived. Even though the composition of modern carbonate muds varies among the six locations investigated, they may serve as analogs for the formation of muds in Cenozoic and Mesozoic reefs and carbonate platforms. Limitations of the interpretation of carbonate-mud origin include the difficulty of identifying, quantifying, and analyzing small grains, the ease with which small

Spatiotemporal patterns of coral disease prevalence on Heron Island, Great Barrier Reef, Australia

Science.gov (United States)

Haapkylä, J.; Melbourne-Thomas, J.; Flavell, M.; Willis, B. L.

2010-12-01

Despite increasing research effort on coral diseases, little is known about factors driving disease dynamics on the Great Barrier Reef (GBR). This is the first study to investigate the temporal patterns of coral disease prevalence and potential drivers of disease around Heron Island, in the southern Capricorn Bunker sector of the GBR. Surveys were conducted in two austral summers and three winters between November 2007 and August 2009 on six sites around the island. Six diseases were detected: brown band syndrome (BrB), growth anomalies (GA), ulcerative white spots (UWS), white syndrome (WS), skeletal eroding band disease (SEB) and black band disease (BBD). The lowest overall mean disease prevalence was 1.87 ± 0.75% (mean ± SE) in November 2007 and the highest 4.22 ± 1.72% in August 2008. There was evidence of seasonality for two diseases: BrB and UWS. This is the first study to report a higher prevalence of BrB in the winter. BrB had a prevalence of 3.29 ± 0.58% in August 2008 and 1.53 ± 0.28% in August 2009, while UWS was the most common syndrome in the summer with a prevalence of 1.12 ± 0.31% in November 2007 and 2.67 ± 0.52% prevalence in January 2008. The prevalence of GAs and SEB did not depend on the season, although the prevalence of GAs increased throughout the study period. WS had a slightly higher prevalence in the summer, but its overall prevalence was low (disease prevalence (12% of Acropora and 3.3% of Montipora species were diseased respectively). These results highlight the correlations between coral disease prevalence, seasonally varying environmental parameters and coral community composition. Given that diseases are likely to reduce the resilience of corals, seasonal patterns in disease prevalence deserve further research.

Sense of place as a determinant of people's attitudes towards the environment: implications for natural resources management and planning in the Great Barrier Reef, Australia.

Science.gov (United States)

Larson, Silva; De Freitas, Debora M; Hicks, Christina C

2013-03-15

Integrating people's values and perceptions into planning is essential for the successful management of natural resources. However, successful implementation of natural resources management decisions on the ground is a complex task, which requires a comprehensive understanding of a system's social and ecological linkages. This paper investigates the relationship between sense of place and people's attitudes towards their natural environment. Sense of place contributes towards shaping peoples' beliefs, values and commitments. Here, we set out to explore how these theoretical contributions can be operationalized for natural resources management planning in the Great Barrier Reef region of Australia. We hypothesise that the region's diverse range of natural resources, conservation values and management pressures might be reflected in people's attachment to place. To tests this proposition, variables capturing socio-demographics, personal wellbeing and a potential for sense of place were collected via mail-out survey of 372 residents of the region, and tested for relationships using multivariate regression and redundancy orientation analyses. Results indicate that place of residence within the region, involvement in community activities, country of birth and the length of time respondents lived in the region are important determinants of the values assigned to factors related to the natural environment. This type of information is readily available from National Census and thus could be incorporated into the planning of community engagement strategies early in the natural resources management planning process. A better understanding of the characteristics that allow sense of place meanings to develop can facilitate a better understanding of people's perceptions towards environmental and biodiversity issues. We suggest that the insights gained from this study can benefit environmental decision making and planning in the Great Barrier Reef region; and that sense of place

Global Human Footprint on the Linkage between Biodiversity and Ecosystem Functioning in Reef Fishes

Science.gov (United States)

Mora, Camilo; Aburto-Oropeza, Octavio; Ayala Bocos, Arturo; Ayotte, Paula M.; Banks, Stuart; Bauman, Andrew G.; Beger, Maria; Bessudo, Sandra; Booth, David J.; Brokovich, Eran; Brooks, Andrew; Chabanet, Pascale; Cinner, Joshua E.; Cortés, Jorge; Cruz-Motta, Juan J.; Cupul Magaña, Amilcar; DeMartini, Edward E.; Edgar, Graham J.; Feary, David A.; Ferse, Sebastian C. A.; Friedlander, Alan M.; Gaston, Kevin J.; Gough, Charlotte; Graham, Nicholas A. J.; Green, Alison; Guzman, Hector; Hardt, Marah; Kulbicki, Michel; Letourneur, Yves; López Pérez, Andres; Loreau, Michel; Loya, Yossi; Martinez, Camilo; Mascareñas-Osorio, Ismael; Morove, Tau; Nadon, Marc-Olivier; Nakamura, Yohei; Paredes, Gustavo; Polunin, Nicholas V. C.; Pratchett, Morgan S.; Reyes Bonilla, Héctor; Rivera, Fernando; Sala, Enric; Sandin, Stuart A.; Soler, German; Stuart-Smith, Rick; Tessier, Emmanuel; Tittensor, Derek P.; Tupper, Mark; Usseglio, Paolo; Vigliola, Laurent; Wantiez, Laurent; Williams, Ivor; Wilson, Shaun K.; Zapata, Fernando A.

2011-01-01

Difficulties in scaling up theoretical and experimental results have raised controversy over the consequences of biodiversity loss for the functioning of natural ecosystems. Using a global survey of reef fish assemblages, we show that in contrast to previous theoretical and experimental studies, ecosystem functioning (as measured by standing biomass) scales in a non-saturating manner with biodiversity (as measured by species and functional richness) in this ecosystem. Our field study also shows a significant and negative interaction between human population density and biodiversity on ecosystem functioning (i.e., for the same human density there were larger reductions in standing biomass at more diverse reefs). Human effects were found to be related to fishing, coastal development, and land use stressors, and currently affect over 75% of the world's coral reefs. Our results indicate that the consequences of biodiversity loss in coral reefs have been considerably underestimated based on existing knowledge and that reef fish assemblages, particularly the most diverse, are greatly vulnerable to the expansion and intensity of anthropogenic stressors in coastal areas. PMID:21483714

Doom and boom on a resilient reef: climate change, algal overgrowth and coral recovery.

Directory of Open Access Journals (Sweden)

Guillermo Diaz-Pulido

Full Text Available Coral reefs around the world are experiencing large-scale degradation, largely due to global climate change, overfishing, diseases and eutrophication. Climate change models suggest increasing frequency and severity of warming-induced coral bleaching events, with consequent increases in coral mortality and algal overgrowth. Critically, the recovery of damaged reefs will depend on the reversibility of seaweed blooms, generally considered to depend on grazing of the seaweed, and replenishment of corals by larvae that successfully recruit to damaged reefs. These processes usually take years to decades to bring a reef back to coral dominance.In 2006, mass bleaching of corals on inshore reefs of the Great Barrier Reef caused high coral mortality. Here we show that this coral mortality was followed by an unprecedented bloom of a single species of unpalatable seaweed (Lobophora variegata, colonizing dead coral skeletons, but that corals on these reefs recovered dramatically, in less than a year. Unexpectedly, this rapid reversal did not involve reestablishment of corals by recruitment of coral larvae, as often assumed, but depended on several ecological mechanisms previously underestimated.These mechanisms of ecological recovery included rapid regeneration rates of remnant coral tissue, very high competitive ability of the corals allowing them to out-compete the seaweed, a natural seasonal decline in the particular species of dominant seaweed, and an effective marine protected area system. Our study provides a key example of the doom and boom of a highly resilient reef, and new insights into the variability and mechanisms of reef resilience under rapid climate change.

Fishing degrades size structure of coral reef fish communities.

Science.gov (United States)

Robinson, James P W; Williams, Ivor D; Edwards, Andrew M; McPherson, Jana; Yeager, Lauren; Vigliola, Laurent; Brainard, Russell E; Baum, Julia K

2017-03-01

Fishing pressure on coral reef ecosystems has been frequently linked to reductions of large fishes and reef fish biomass. Associated impacts on overall community structure are, however, less clear. In size-structured aquatic ecosystems, fishing impacts are commonly quantified using size spectra, which describe the distribution of individual body sizes within a community. We examined the size spectra and biomass of coral reef fish communities at 38 US-affiliated Pacific islands that ranged in human presence from near pristine to human population centers. Size spectra 'steepened' steadily with increasing human population and proximity to market due to a reduction in the relative biomass of large fishes and an increase in the dominance of small fishes. Reef fish biomass was substantially lower on inhabited islands than uninhabited ones, even at inhabited islands with the lowest levels of human presence. We found that on populated islands size spectra exponents decreased (analogous to size spectra steepening) linearly with declining biomass, whereas on uninhabited islands there was no relationship. Size spectra were steeper in regions of low sea surface temperature but were insensitive to variation in other environmental and geomorphic covariates. In contrast, reef fish biomass was highly sensitive to oceanographic conditions, being influenced by both oceanic productivity and sea surface temperature. Our results suggest that community size structure may be a more robust indicator than fish biomass to increasing human presence and that size spectra are reliable indicators of exploitation impacts across regions of different fish community compositions, environmental drivers, and fisheries types. Size-based approaches that link directly to functional properties of fish communities, and are relatively insensitive to abiotic variation across biogeographic regions, offer great potential for developing our understanding of fishing impacts in coral reef ecosystems. © 2016

Spatial patterns of fish standing biomass across Brazilian reefs.

Science.gov (United States)

Morais, R A; Ferreira, C E L; Floeter, S R

2017-12-01

A large fish-count dataset from the Brazilian province was used to describe spatial patterns in standing biomass and test if total biomass, taxonomic and functional trophic structure vary across nested spatial scales. Taxonomic and functional structure varied more among localities and sites than among regions. Total biomass was generally higher at oceanic islands and remote or protected localities along the coast. Lower level carnivores comprised a large part of the biomass at almost all localities (mean of 44%), zooplanktivores never attained more than 14% and omnivores were more representative of subtropical reefs and oceanic islands (up to 66% of total biomass). Small and large herbivores and detritivores varied greatly in their contribution to total biomass, with no clear geographical patterns. Macrocarnivores comprised less than 12% of the biomass anywhere, except for two remote localities. Top predators, such as sharks and very large groupers, were rare and restricted to a few reefs, suggesting that their ecological function might have already been lost in many Brazilian reefs. © 2017 The Fisheries Society of the British Isles.

Reefs for the future: Resilience of coral reefs in the main Hawaiian Islands

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Declining health of coral reef ecosystems led scientists to search for factors that support reef resilience: the ability of reefs to resist and recover from...

Widespread hybridization and bidirectional introgression in sympatric species of coral reef fish

KAUST Repository

Harrison, Hugo B.

2017-10-28

Coral reefs are highly diverse ecosystems, where numerous closely related species often coexist. How new species arise and are maintained in these high geneflow environments have been long-standing conundrums. Hybridization and patterns of introgression between sympatric species provide a unique insight into the mechanisms of speciation and the maintenance of species boundaries. In this study, we investigate the extent of hybridization between two closely related species of coral reef fish: the common coral trout (Plectropomus leopardus) and the bar-cheek coral trout (Plectropomus maculatus). Using a complementary set of 25 microsatellite loci, we distinguish pure genotype classes from first- and later-generation hybrids, identifying 124 interspecific hybrids from a collection of 2,991 coral trout sampled in inshore and mid-shelf reefs of the southern Great Barrier Reef. Hybrids were ubiquitous among reefs, fertile and spanned multiple generations suggesting both ecological and evolutionary processes are acting to maintain species barriers. We elaborate on these finding to investigate the extent of genomic introgression and admixture from 2,271 SNP loci recovered from a ddRAD library of pure and hybrid individuals. An analysis of genomic clines on recovered loci indicates that 261 SNP loci deviate from a model of neutral introgression, of which 132 indicate a pattern of introgression consistent with selection favouring both hybrid and parental genotypes. Our findings indicate genome-wide, bidirectional introgression between two sympatric species of coral reef fishes and provide further support to a growing body of evidence for the role of hybridization in the evolution of coral reef fishes.

Coral Reef Color: Remote and In-Situ Imaging Spectroscopy of Reef Structure and Function

Science.gov (United States)

Hochberg, E. J.

2016-02-01

Coral reefs are threatened at local to global scales by a litany of anthropogenic impacts, including overfishing, coastal development, marine and watershed pollution, rising ocean temperatures, and ocean acidification. However, available data for the primary indicator of coral reef condition — proportional cover of living coral — are surprisingly sparse and show patterns that contradict the prevailing understanding of how environment impacts reef condition. Remote sensing is the only available tool for acquiring synoptic, uniform data on reef condition at regional to global scales. Discrimination between coral and other reef benthos relies on narrow wavebands afforded by imaging spectroscopy. The same spectral information allows non-invasive quantification of photosynthetic pigment composition, which shows unexpected phenological trends. There is also potential to link biodiversity with optical diversity, though there has been no effort in that direction. Imaging spectroscopy underlies the light-use efficiency model for reef primary production by quantifying light capture, which in turn indicates biochemical capacity for CO2 assimilation. Reef calcification is strongly correlated with primary production, suggesting the possibility for an optics-based model of that aspect of reef function, as well. By scaling these spectral models for use with remote sensing, we can vastly improve our understanding of reef structure, function, and overall condition across regional to global scales. By analyzing those remote sensing products against ancillary environmental data, we can construct secondary models to predict reef futures in the era of global change. This final point is the objective of CORAL (COral Reef Airborne Laboratory), a three-year project funded under NASA's Earth Venture Suborbital-2 program to investigate the relationship between coral reef condition at the ecosystem scale and various nominal biogeophysical forcing parameters.

Coral reefs in the Anthropocene.

Science.gov (United States)

Hughes, Terry P; Barnes, Michele L; Bellwood, David R; Cinner, Joshua E; Cumming, Graeme S; Jackson, Jeremy B C; Kleypas, Joanie; van de Leemput, Ingrid A; Lough, Janice M; Morrison, Tiffany H; Palumbi, Stephen R; van Nes, Egbert H; Scheffer, Marten

2017-05-31

Coral reefs support immense biodiversity and provide important ecosystem services to many millions of people. Yet reefs are degrading rapidly in response to numerous anthropogenic drivers. In the coming centuries, reefs will run the gauntlet of climate change, and rising temperatures will transform them into new configurations, unlike anything observed previously by humans. Returning reefs to past configurations is no longer an option. Instead, the global challenge is to steer reefs through the Anthropocene era in a way that maintains their biological functions. Successful navigation of this transition will require radical changes in the science, management and governance of coral reefs.

Does reef architectural complexity influence resource availability for a large reef-dwelling invertebrate?

Science.gov (United States)

Lozano-Álvarez, Enrique; Luviano-Aparicio, Nelia; Negrete-Soto, Fernando; Barradas-Ortiz, Cecilia; Aguíñiga-García, Sergio; Morillo-Velarde, Piedad S.; Álvarez-Filip, Lorenzo; Briones-Fourzán, Patricia

2017-10-01

In coral reefs, loss of architectural complexity and its associated habitat degradation is expected to affect reef specialists in particular due to changes in resource availability. We explored whether these features could potentially affect populations of a large invertebrate, the spotted spiny lobster Panulirus guttatus, which is an obligate Caribbean coral reef-dweller with a limited home range. We selected two separate large coral reef patches in Puerto Morelos (Mexico) that differed significantly in structural complexity and level of degradation, as assessed via the rugosity index, habitat assessment score, and percent cover of various benthic components. On each reef, we estimated density of P. guttatus and sampled lobsters to analyze their stomach contents, three different condition indices, and stable isotopes (δ15N and δ13C) in muscle. Lobster density did not vary with reef, suggesting that available crevices in the less complex patch still provided adequate refuge to these lobsters. Lobsters consumed many food types, dominated by mollusks and crustaceans, but proportionally more crustaceans (herbivore crabs) in the less complex patch, which had more calcareous macroalgae and algal turf. Lobsters from both reefs had a similar condition (all three indices) and mean δ15N, suggesting a similar quality of diet between reefs related to their opportunistic feeding, but differed in mean δ13C values, reflecting the different carbon sources between reefs and providing indirect evidence of individuals of P. guttatus foraging exclusively over their home reef. Overall, we found no apparent effects of architectural complexity, at least to the degree observed in our less complex patch, on density, condition, or trophic level of P. guttatus.

Gear and survey efficiency of patent tongs for oyster populations on restoration reefs.

Directory of Open Access Journals (Sweden)

David M Schulte

Full Text Available Surveys of restored oyster reefs need to produce accurate population estimates to assess the efficacy of restoration. Due to the complex structure of subtidal oyster reefs, one effective and efficient means to sample is by patent tongs, rather than SCUBA, dredges, or bottom cores. Restored reefs vary in relief and oyster density, either of which could affect survey efficiency. This study is the first to evaluate gear (the first full grab and survey (which includes selecting a specific half portion of the first grab for further processing efficiencies of hand-operated patent tongs as a function of reef height and oyster density on subtidal restoration reefs. In the Great Wicomico River, a tributary of lower Chesapeake Bay, restored reefs of high- and low-relief (25-45 cm, and 8-12 cm, respectively were constructed throughout the river as the first large-scale oyster sanctuary reef restoration effort (sanctuary acreage > 20 ha at one site in Chesapeake Bay. We designed a metal frame to guide a non-hydraulic mechanical patent tong repeatedly into the same plot on a restored reef until all oysters within the grab area were captured. Full capture was verified by an underwater remotely-operated vehicle. Samples (n = 19 were taken on nine different reefs, including five low- (n = 8 and four high-relief reefs (n = 11, over a two-year period. The gear efficiency of the patent tong was estimated to be 76% (± 5% standard error, whereas survey efficiency increased to 81% (± 10% due to processing. Neither efficiency differed significantly between young-of-the-year oysters (spat and adults, high- and low-relief reefs, or years. As this type of patent tong is a common and cost-effective tool to evaluate oyster restoration projects as well as population density on fished habitat, knowing the gear and survey efficiencies allows for accurate and precise population estimates.

Carbon budget of coral reef systems: an overview of observations in fringing reefs, barrier reefs and atolls in the Indo-Pacific regions

International Nuclear Information System (INIS)

Suzuki, Atsushi; Kawahata, Hodaka

2003-01-01

The seawater CO 2 system and carbon budget were examined in coral reefs of wide variety with respect to topographic types and oceanographic settings in the Indo-Pacific oceans. A system-level net organic-to-inorganic carbon production ratio (ROI) is a master parameter for controlling the carbon cycle in coral reef systems, including their sink/source behavior for atmospheric CO 2 . A reef system with ROI less than approximately 0.6 has a potential for releasing CO 2 . The production ratio, however, is not easy to estimate on a particular reef. Instead, observations planned to detect the offshore-lagoon difference in partial pressure of CO 2 (pCO 2 ) and a graphic approach based on a total alkalinity-dissolved inorganic carbon diagram can reveal system-level performance of the carbon cycle in coral reefs. Surface pCO 2 values in the lagoons of atolls and barrier reefs were consistently higher than those in their offshore waters, showing differences between 6 and 46 atm, together with a depletion in total alkalinity up to 100 mol/kg, indicating predominant carbonate production relative to net organic carbon production. Reef topography, especially residence time of lagoon water, has a secondary effect on the magnitude of the offshore-lagoon pCO 2 difference. Terrestrial influence was recognized in coastal reefs, including the GBR lagoon and a fringing reef of the Ryukyu Islands. High carbon input appears to enhance CO 2 efflux to the atmosphere because of their high dissolved C:P ratios. Coral reefs, in general, act as an alkalinity sink and a potentially CO 2 -releasing site due to carbonate precipitation and land-derived carbon

The status of coral reef ecology research in the Red Sea

KAUST Repository

Berumen, Michael L.

2013-06-21

The Red Sea has long been recognized as a region of high biodiversity and endemism. Despite this diversity and early history of scientific work, our understanding of the ecology of coral reefs in the Red Sea has lagged behind that of other large coral reef systems. We carried out a quantitative assessment of ISI-listed research published from the Red Sea in eight specific topics (apex predators, connectivity, coral bleaching, coral reproductive biology, herbivory, marine protected areas, non-coral invertebrates and reef-associated bacteria) and compared the amount of research conducted in the Red Sea to that from Australia\\'s Great Barrier Reef (GBR) and the Caribbean. On average, for these eight topics, the Red Sea had 1/6th the amount of research compared to the GBR and about 1/8th the amount of the Caribbean. Further, more than 50 % of the published research from the Red Sea originated from the Gulf of Aqaba, a small area (<2 % of the area of the Red Sea) in the far northern Red Sea. We summarize the general state of knowledge in these eight topics and highlight the areas of future research priorities for the Red Sea region. Notably, data that could inform science-based management approaches are badly lacking in most Red Sea countries. The Red Sea, as a geologically "young" sea located in one of the warmest regions of the world, has the potential to provide insight into pressing topics such as speciation processes as well as the capacity of reef systems and organisms to adapt to global climate change. As one of the world\\'s most biodiverse coral reef regions, the Red Sea may yet have a significant role to play in our understanding of coral reef ecology at a global scale. © 2013 Springer-Verlag Berlin Heidelberg.

Ecology of the ciguatera causing dinoflagellates from the Northern Great Barrier Reef: changes in community distribution and coastal eutrophication.

Science.gov (United States)

Skinner, Mark P; Lewis, Richard J; Morton, Steve

2013-12-15

Ciguatera fish poisoning (CFP) is known to be caused by the ciguatoxins from the dinoflagellate genus Gambierdiscus, however, there is the potential for other toxins such as okadaic acid and dinophysistoxins from the genus Prorocentrum, and palytoxin from the genus Ostreopsis, to contaminate seafood. These genera may also be indicators of ecosystem health and potentially impact on coral reef ecosystems and the role they may play in the succession of coral to macroalgae dominated reefs has not been researched. Sixteen GBR field sites spanning inshore, mid-lagoon and outer lagoon (offshore) regions were studied. Samples were collected from September 2006 to December 2007 and abundance of benthic dinoflagellates on different host macroalgae and concentration of nutrients present in the water column were determined. The maximum abundance of Prorocentrum, Ostreopsis and Gambierdiscus found was 112, 793 and 50 cells per gram wet weight of host macroalgae, respectively. The average level of Dissolved Inorganic Nitrogen (DIN) in the water column across all sites (0.03 mg/L) was found to be more than double the threshold critical value (0.013 mg/L) for healthy coral reefs. Compared to a previous study 1984, there is evidence of a major shift in the distribution and abundance of these dinoflagellates. Inshore reefs have either of Prorocentrum (as at Green Island) or Ostreopsis (as at Magnetic Island) dominating the macroalgal surface niche which was once dominated by Gambierdiscus, whilst at offshore regions Gambierdiscus is still dominant. This succession may be linked to the ongoing eutrophication of the GBR lagoon and have consequences for the sources of toxins for ongoing cases of ciguatera. Published by Elsevier Ltd.

Carbon budget of coral reef systems: an overview of observations in fringing reefs, barrier reefs and atolls in the Indo-Pacific regions

Energy Technology Data Exchange (ETDEWEB)

Suzuki, Atsushi; Kawahata, Hodaka [National Inst. of Advanced Industrial Science and Technology, Ibaraki (Japan). Inst. for Marine Resources and Environment

2003-04-01

The seawater CO{sub 2} system and carbon budget were examined in coral reefs of wide variety with respect to topographic types and oceanographic settings in the Indo-Pacific oceans. A system-level net organic-to-inorganic carbon production ratio (ROI) is a master parameter for controlling the carbon cycle in coral reef systems, including their sink/source behavior for atmospheric CO{sub 2}. A reef system with ROI less than approximately 0.6 has a potential for releasing CO{sub 2}. The production ratio, however, is not easy to estimate on a particular reef. Instead, observations planned to detect the offshore-lagoon difference in partial pressure of CO{sub 2} (pCO{sub 2}) and a graphic approach based on a total alkalinity-dissolved inorganic carbon diagram can reveal system-level performance of the carbon cycle in coral reefs. Surface pCO{sub 2} values in the lagoons of atolls and barrier reefs were consistently higher than those in their offshore waters, showing differences between 6 and 46 atm, together with a depletion in total alkalinity up to 100 mol/kg, indicating predominant carbonate production relative to net organic carbon production. Reef topography, especially residence time of lagoon water, has a secondary effect on the magnitude of the offshore-lagoon pCO{sub 2} difference. Terrestrial influence was recognized in coastal reefs, including the GBR lagoon and a fringing reef of the Ryukyu Islands. High carbon input appears to enhance CO{sub 2} efflux to the atmosphere because of their high dissolved C:P ratios. Coral reefs, in general, act as an alkalinity sink and a potentially CO{sub 2}-releasing site due to carbonate precipitation and land-derived carbon.

Black reefs: iron-induced phase shifts on coral reefs

NARCIS (Netherlands)

Wegley Kelly, L.; Barott, K.L.; Dinsdale, E.; Friedlander, A.M.; Nosrat, B.; Obura, D.; Sala, E.; Sandin, S.A.; Smith, J.E.; Vermeij, M.J.A.; Williams, G.J.; Willner, D.; Rohwer, F.

2012-01-01

The Line Islands are calcium carbonate coral reef platforms located in iron-poor regions of the central Pacific. Natural terrestrial run-off of iron is non-existent and aerial deposition is extremely low. However, a number of ship groundings have occurred on these atolls. The reefs surrounding the

Human activities threaten coral reefs

International Nuclear Information System (INIS)

Tveitdal, Svein; Bjoerke, Aake

2002-01-01

Research indicates that 58 per cent of the coral reefs of the world are threatened by human activities. Pollution and global heating represent some of the threats. Coral reefs just beneath the surface of the sea are very sensitive to temperature changes. Since 1979, mass death of coral reefs has been reported increasingly often. More than 1000 marine species live in the coral reefs, among these are one fourth of all marine species of fish. It is imperative that the coral reefs be preserved, as coastal communities all over the world depend on them as sources of food and as they are the raw materials for important medicines. The article discusses the threats to the coral reefs in general and does not single out any particular energy-related activity as the principal threat. For instance, the El-Nino phenomenon of the Pacific Ocean is probably involved in mass death of coral reefs and in the North Sea large parts of deep-water reefs have been crushed by heavy beam trawlers fishing for bottom fish

Integration of coral reef ecosystem process studies and remote sensing: Chapter 5

Science.gov (United States)

Brook, John; Yates, Kimberly; Halley, Robert

2006-01-01

Worldwide, local-scale anthropogenic stress combined with global climate change is driving shifts in the state of reef benthic communities from coral-rich to micro- or macroalgal-dominated (Knowlton, 1992; Done, 1999). Such phase shifts in reef benthic communities may be either abrupt or gradual, and case studies from diverse ocean basins demonstrate that recovery, while uncertain (Hughes, 1994), typically involves progression through successional stages (Done, 1992). These transitions in benthic community structure involve changes in community metabolism, and accordingly, the holistic evaluation of associated biogeochemical variables is of great intrinsic value (Done, 1992). Effective reef management requires advance prediction of coral reef alteration in the face of anthropogenic stress and change in the global environment (Hatcher, 1997a). In practice, this goal requires techniques that can rapidly discern, at an early stage, sublethal effects that may cause long-term increases in mortality (brown, 1988; Grigg and Dollar, 1990). Such methods would improve our understanding of the differences in the population, community, and ecosystem structure, as well as function, between pristine and degraded reefs. This knowledge base could then support scientifically based management strategies (Done, 1992). Brown (1988) noted the general lack of rigor in the assessment of stress on coral reefs and suggested that more quantitative approaches than currently exist are needed to allow objective understanding of coral reef dynamics. Sensitive techniques for the timely appraisal of pollution effects or generalized endemic stress in coral reefs are sorely lacking (Grigg and Dollar, 1990; Wilkinsin, 1992). Moreover, monitoring methods based on population inventories, sclerochronology, or reproductive biology tend to myopic and may give inconsistent results. Ideally, an improved means of evaluating reef stress would discriminate mortality due to natural causes from morality to

The coral reef crisis: the critical importance of<350 ppm CO2.

Science.gov (United States)

Veron, J E N; Hoegh-Guldberg, O; Lenton, T M; Lough, J M; Obura, D O; Pearce-Kelly, P; Sheppard, C R C; Spalding, M; Stafford-Smith, M G; Rogers, A D

2009-10-01

Temperature-induced mass coral bleaching causing mortality on a wide geographic scale started when atmospheric CO(2) levels exceeded approximately 320 ppm. When CO(2) levels reached approximately 340 ppm, sporadic but highly destructive mass bleaching occurred in most reefs world-wide, often associated with El Niño events. Recovery was dependent on the vulnerability of individual reef areas and on the reef's previous history and resilience. At today's level of approximately 387 ppm, allowing a lag-time of 10 years for sea temperatures to respond, most reefs world-wide are committed to an irreversible decline. Mass bleaching will in future become annual, departing from the 4 to 7 years return-time of El Niño events. Bleaching will be exacerbated by the effects of degraded water-quality and increased severe weather events. In addition, the progressive onset of ocean acidification will cause reduction of coral growth and retardation of the growth of high magnesium calcite-secreting coralline algae. If CO(2) levels are allowed to reach 450 ppm (due to occur by 2030-2040 at the current rates), reefs will be in rapid and terminal decline world-wide from multiple synergies arising from mass bleaching, ocean acidification, and other environmental impacts. Damage to shallow reef communities will become extensive with consequent reduction of biodiversity followed by extinctions. Reefs will cease to be large-scale nursery grounds for fish and will cease to have most of their current value to humanity. There will be knock-on effects to ecosystems associated with reefs, and to other pelagic and benthic ecosystems. Should CO(2) levels reach 600 ppm reefs will be eroding geological structures with populations of surviving biota restricted to refuges. Domino effects will follow, affecting many other marine ecosystems. This is likely to have been the path of great mass extinctions of the past, adding to the case that anthropogenic CO(2) emissions could trigger the Earth's sixth

Great Palm Island Extension, Density, and Calcification Data for 1872 to 1985

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Extension, Density, and Calcification data from 35 Porites coral cores covering the entire length of the Great Barrier Reef, Australia. Data set contains 35...

Soundscapes from a Tropical Eastern Pacific reef and a Caribbean Sea reef

Science.gov (United States)

Staaterman, E.; Rice, A. N.; Mann, D. A.; Paris, C. B.

2013-06-01

Underwater soundscapes vary due to the abiotic and biological components of the habitat. We quantitatively characterized the acoustic environments of two coral reef habitats, one in the Tropical Eastern Pacific (Panama) and one in the Caribbean (Florida Keys), over 2-day recording durations in July 2011. We examined the frequency distribution, temporal variability, and biological patterns of sound production and found clear differences. The Pacific reef exhibited clear biological patterns and high temporal variability, such as the onset of snapping shrimp noise at night, as well as a 400-Hz daytime band likely produced by damselfish. In contrast, the Caribbean reef had high sound levels in the lowest frequencies, but lacked clear temporal patterns. We suggest that acoustic measures are an important element to include in reef monitoring programs, as the acoustic environment plays an important role in the ecology of reef organisms at multiple life-history stages.

Coral Reef Remote Sensing: Helping Managers Protect Reefs in a Changing Climate

Science.gov (United States)

Eakin, C.; Liu, G.; Li, J.; Muller-Karger, F. E.; Heron, S. F.; Gledhill, D. K.; Christensen, T.; Rauenzahn, J.; Morgan, J.; Parker, B. A.; Skirving, W. J.; Nim, C.; Burgess, T.; Strong, A. E.

2010-12-01

Climate change and ocean acidification are already having severe impacts on coral reef ecosystems. Warming oceans have caused corals to bleach, or expel their symbiotic algae (zooxanthellae) with alarming frequency and severity and have contributed to a rise in coral infectious diseases. Ocean acidification is reducing the availability of carbonate ions needed by corals and many other marine organisms to build structural components like skeletons and shells and may already be slowing the coral growth. These two impacts are already killing corals and slowing reef growth, reducing biodiversity and the structure needed to provide crucial ecosystem services. NOAA’s Coral Reef Watch (CRW) uses a combination of satellite data, in situ observations, and models to provide coral reef managers, scientists, and others with information needed to monitor threats to coral reefs. The advance notice provided by remote sensing and models allows resource managers to protect corals, coral reefs, and the services they provide, although managers often encounter barriers to implementation of adaptation strategies. This talk will focus on application of NOAA’s satellite and model-based tools that monitor the risk of mass coral bleaching on a global scale, ocean acidification in the Caribbean, and coral disease outbreaks in selected regions, as well as CRW work to train managers in their use, and barriers to taking action to adapt to climate change. As both anthropogenic CO2 and temperatures will continue to rise, local actions to protect reefs are becoming even more important.

Fire coral clones demonstrate phenotypic plasticity among reef habitats.

Science.gov (United States)

Dubé, Caroline E; Boissin, Emilie; Maynard, Jeffrey A; Planes, Serge

2017-08-01

Clonal populations are often characterized by reduced levels of genotypic diversity, which can translate into lower numbers of functional phenotypes, both of which impede adaptation. Study of partially clonal animals enables examination of the environmental settings under which clonal reproduction is favoured. Here, we gathered genotypic and phenotypic information from 3,651 georeferenced colonies of the fire coral Millepora platyphylla in five habitats with different hydrodynamic regimes in Moorea, French Polynesia. In the upper slope where waves break, most colonies grew as vertical sheets ("sheet tree") making them more vulnerable to fragmentation. Nearly all fire corals in the other habitats are encrusting or massive. The M. platyphylla population is highly clonal (80% of the colonies are clones), while characterized by the highest genotype diversity ever documented for terrestrial or marine populations (1,064 genotypes). The proportion of clones varies greatly among habitats (≥58%-97%) and clones (328 clonal lineages) are distributed perpendicularly from the reef crest, perfectly aligned with wave energy. There are six clonal lineages with clones dispersed in at least two adjacent habitats that strongly demonstrate phenotypic plasticity. Eighty per cent of the colonies in these lineages are "sheet tree" on the upper slope, while 80%-100% are encrusting or massive on the mid slope and back reef. This is a unique example of phenotypic plasticity among reef-building coral clones as corals typically have wave-tolerant growth forms in high-energy reef areas. © 2017 John Wiley & Sons Ltd.

Evidence of chronic anthropogenic nutrient within coastal lagoon reefs adjacent to urban and tourism centers, Kenya: A stable isotope approach.

Science.gov (United States)

Mwaura, Jelvas; Umezawa, Yu; Nakamura, Takashi; Kamau, Joseph

2017-06-30

The source of anthropogenic nutrient and its spatial extent in three fringing reefs with differing human population gradients in Kenya were investigated using stable isotope approaches. Nutrient concentrations and nitrate-δ 15 N in seepage water indicated that population density and tourism contributed greatly to the extent of nutrient loading to adjacent reefs. Although water-column nutrient analyses did not show any significant difference among the reefs, higher δ 15 N and N contents in macrophytes showed terrestrial nutrients affected primary producers in onshore areas in Nyali and Bamburi reefs, but were mitigated by offshore water intrusion especially at Nyali. On the offshore reef flat, where the same species of macroalgae were not available, complementary use of δ 15 N in sedimentary organic matter suggested inputs of nutrients originated from the urban city of Mombasa. If population increases in the future, nutrient conditions in the shallower reef, Vipingo, may be dramatically degraded due to lower water exchange ratio. Copyright © 2017 Elsevier Ltd. All rights reserved.

Modelling coral reef futures to inform management: can reducing local-scale stressors conserve reefs under climate change?

Science.gov (United States)

Gurney, Georgina G; Melbourne-Thomas, Jessica; Geronimo, Rollan C; Aliño, Perry M; Johnson, Craig R

2013-01-01

Climate change has emerged as a principal threat to coral reefs, and is expected to exacerbate coral reef degradation caused by more localised stressors. Management of local stressors is widely advocated to bolster coral reef resilience, but the extent to which management of local stressors might affect future trajectories of reef state remains unclear. This is in part because of limited understanding of the cumulative impact of multiple stressors. Models are ideal tools to aid understanding of future reef state under alternative management and climatic scenarios, but to date few have been sufficiently developed to be useful as decision support tools for local management of coral reefs subject to multiple stressors. We used a simulation model of coral reefs to investigate the extent to which the management of local stressors (namely poor water quality and fishing) might influence future reef state under varying climatic scenarios relating to coral bleaching. We parameterised the model for Bolinao, the Philippines, and explored how simulation modelling can be used to provide decision support for local management. We found that management of water quality, and to a lesser extent fishing, can have a significant impact on future reef state, including coral recovery following bleaching-induced mortality. The stressors we examined interacted antagonistically to affect reef state, highlighting the importance of considering the combined impact of multiple stressors rather than considering them individually. Further, by providing explicit guidance for management of Bolinao's reef system, such as which course of management action will most likely to be effective over what time scales and at which sites, we demonstrated the utility of simulation models for supporting management. Aside from providing explicit guidance for management of Bolinao's reef system, our study offers insights which could inform reef management more broadly, as well as general understanding of reef

Modelling Coral Reef Futures to Inform Management: Can Reducing Local-Scale Stressors Conserve Reefs under Climate Change?

Science.gov (United States)

Gurney, Georgina G.; Melbourne-Thomas, Jessica; Geronimo, Rollan C.; Aliño, Perry M.; Johnson, Craig R.

2013-01-01

Climate change has emerged as a principal threat to coral reefs, and is expected to exacerbate coral reef degradation caused by more localised stressors. Management of local stressors is widely advocated to bolster coral reef resilience, but the extent to which management of local stressors might affect future trajectories of reef state remains unclear. This is in part because of limited understanding of the cumulative impact of multiple stressors. Models are ideal tools to aid understanding of future reef state under alternative management and climatic scenarios, but to date few have been sufficiently developed to be useful as decision support tools for local management of coral reefs subject to multiple stressors. We used a simulation model of coral reefs to investigate the extent to which the management of local stressors (namely poor water quality and fishing) might influence future reef state under varying climatic scenarios relating to coral bleaching. We parameterised the model for Bolinao, the Philippines, and explored how simulation modelling can be used to provide decision support for local management. We found that management of water quality, and to a lesser extent fishing, can have a significant impact on future reef state, including coral recovery following bleaching-induced mortality. The stressors we examined interacted antagonistically to affect reef state, highlighting the importance of considering the combined impact of multiple stressors rather than considering them individually. Further, by providing explicit guidance for management of Bolinao's reef system, such as which course of management action will most likely to be effective over what time scales and at which sites, we demonstrated the utility of simulation models for supporting management. Aside from providing explicit guidance for management of Bolinao's reef system, our study offers insights which could inform reef management more broadly, as well as general understanding of reef

Modelling coral reef futures to inform management: can reducing local-scale stressors conserve reefs under climate change?

Directory of Open Access Journals (Sweden)

Georgina G Gurney

Full Text Available Climate change has emerged as a principal threat to coral reefs, and is expected to exacerbate coral reef degradation caused by more localised stressors. Management of local stressors is widely advocated to bolster coral reef resilience, but the extent to which management of local stressors might affect future trajectories of reef state remains unclear. This is in part because of limited understanding of the cumulative impact of multiple stressors. Models are ideal tools to aid understanding of future reef state under alternative management and climatic scenarios, but to date few have been sufficiently developed to be useful as decision support tools for local management of coral reefs subject to multiple stressors. We used a simulation model of coral reefs to investigate the extent to which the management of local stressors (namely poor water quality and fishing might influence future reef state under varying climatic scenarios relating to coral bleaching. We parameterised the model for Bolinao, the Philippines, and explored how simulation modelling can be used to provide decision support for local management. We found that management of water quality, and to a lesser extent fishing, can have a significant impact on future reef state, including coral recovery following bleaching-induced mortality. The stressors we examined interacted antagonistically to affect reef state, highlighting the importance of considering the combined impact of multiple stressors rather than considering them individually. Further, by providing explicit guidance for management of Bolinao's reef system, such as which course of management action will most likely to be effective over what time scales and at which sites, we demonstrated the utility of simulation models for supporting management. Aside from providing explicit guidance for management of Bolinao's reef system, our study offers insights which could inform reef management more broadly, as well as general

Predictable pollution: an assessment of weather balloons and associated impacts on the marine environment--an example for the Great Barrier Reef, Australia.

Science.gov (United States)

O'Shea, Owen R; Hamann, Mark; Smith, Walter; Taylor, Heidi

2014-02-15

Efforts to curb pollution in the marine environment are covered by national and international legislation, yet weather balloons are released into the environment with no salvage agenda. Here, we assess impacts associated with weather balloons in the Great Barrier Reef World Heritage Area (GBRWHA). We use modeling to assess the probability of ocean endpoints for released weather balloons and predict pathways post-release. In addition, we use 21 months of data from beach cleanup events to validate our results and assess the abundance and frequency of weather balloon fragments in the GBRWHA. We found between 65% and 70% of balloons land in the ocean and ocean currents largely determine final endpoints. Beach cleanup data revealed 2460 weather balloon fragments were recovered from 24 sites within the GBRWHA. This is the first attempt to quantify this problem and these data will add support to a much-needed mitigation strategy for weather balloon waste. Copyright © 2013 Elsevier Ltd. All rights reserved.

Unmixing-Based Denoising as a Pre-Processing Step for Coral Reef Analysis

Science.gov (United States)

Cerra, D.; Traganos, D.; Gege, P.; Reinartz, P.

2017-05-01

Coral reefs, among the world's most biodiverse and productive submerged habitats, have faced several mass bleaching events due to climate change during the past 35 years. In the course of this century, global warming and ocean acidification are expected to cause corals to become increasingly rare on reef systems. This will result in a sharp decrease in the biodiversity of reef communities and carbonate reef structures. Coral reefs may be mapped, characterized and monitored through remote sensing. Hyperspectral images in particular excel in being used in coral monitoring, being characterized by very rich spectral information, which results in a strong discrimination power to characterize a target of interest, and separate healthy corals from bleached ones. Being submerged habitats, coral reef systems are difficult to analyse in airborne or satellite images, as relevant information is conveyed in bands in the blue range which exhibit lower signal-to-noise ratio (SNR) with respect to other spectral ranges; furthermore, water is absorbing most of the incident solar radiation, further decreasing the SNR. Derivative features, which are important in coral analysis, result greatly affected by the resulting noise present in relevant spectral bands, justifying the need of new denoising techniques able to keep local spatial and spectral features. In this paper, Unmixing-based Denoising (UBD) is used to enable analysis of a hyperspectral image acquired over a coral reef system in the Red Sea based on derivative features. UBD reconstructs pixelwise a dataset with reduced noise effects, by forcing each spectrum to a linear combination of other reference spectra, exploiting the high dimensionality of hyperspectral datasets. Results show clear enhancements with respect to traditional denoising methods based on spatial and spectral smoothing, facilitating the coral detection task.

Coal ash artificial reef demonstration

International Nuclear Information System (INIS)

Livingston, R.J.; Brendel, G.F.; Bruzek, D.A.

1991-01-01

This experimental project evaluated the use of coal ash to construct artificial reefs. An artificial reef consisting of approximately 33 tons of cement-stabilized coal ash blocks was constructed in approximately 20 feet of water in the Gulf of Mexico approximately 9.3 miles west of Cedar Key, Florida. The project objectives were: (1) demonstrate that a durable coal ash/cement block can be manufactured by commercial block-making machines for use in artificial reefs, and (2) evaluate the possibility that a physically stable and environmentally acceptable coal ash/cement block reef can be constructed as a means of expanding recreational and commercial fisheries. The reef was constructed in February 1988 and biological surveys were made at monthly intervals from May 1988 to April 1989. The project provided information regarding: Development of an optimum design mix, block production and reef construction, chemical composition of block leachate, biological colonization of the reef, potential concentration of metals in the food web associated with the reef, acute bioassays (96-hour LC 50 ). The Cedar Key reef was found to be a habitat that was associated with a relatively rich assemblage of plants and animals. The reef did not appear to be a major source of heavy metals to species at various levels of biological organization. GAI Consultants, Inc (GAI) of Monroeville, Pennsylvania was the prime consultant for the project. The biological monitoring surveys and evaluations were performed by Environmental Planning and Analysis, Inc. of Tallahassee, Florida. The chemical analyses of biological organisms and bioassay elutriates were performed by Savannah Laboratories of Tallahassee, Florida. Florida Power Corporation of St. Petersburg, Florida sponsored the project and supplied ash from their Crystal River Energy Complex

Ocean acidification and calcifying reef organisms: a mesocosm investigation

Science.gov (United States)

Jokiel, P. L.; Rodgers, K. S.; Kuffner, I. B.; Andersson, A. J.; Cox, E. F.; MacKenzie, F. T.

2008-09-01

A long-term (10 months) controlled experiment was conducted to test the impact of increased partial pressure of carbon dioxide ( pCO2) on common calcifying coral reef organisms. The experiment was conducted in replicate continuous flow coral reef mesocosms flushed with unfiltered sea water from Kaneohe Bay, Oahu, Hawaii. Mesocosms were located in full sunlight and experienced diurnal and seasonal fluctuations in temperature and sea water chemistry characteristic of the adjacent reef flat. Treatment mesocosms were manipulated to simulate an increase in pCO2 to levels expected in this century [midday pCO2 levels exceeding control mesocosms by 365 ± 130 μatm (mean ± sd)]. Acidification had a profound impact on the development and growth of crustose coralline algae (CCA) populations. During the experiment, CCA developed 25% cover in the control mesocosms and only 4% in the acidified mesocosms, representing an 86% relative reduction. Free-living associations of CCA known as rhodoliths living in the control mesocosms grew at a rate of 0.6 g buoyant weight year-1 while those in the acidified experimental treatment decreased in weight at a rate of 0.9 g buoyant weight year-1, representing a 250% difference. CCA play an important role in the growth and stabilization of carbonate reefs, so future changes of this magnitude could greatly impact coral reefs throughout the world. Coral calcification decreased between 15% and 20% under acidified conditions. Linear extension decreased by 14% under acidified conditions in one experiment. Larvae of the coral Pocillopora damicornis were able to recruit under the acidified conditions. In addition, there was no significant difference in production of gametes by the coral Montipora capitata after 6 months of exposure to the treatments.

Ocean acidification and calcifying reef organisms: A mesocosm investigation

Science.gov (United States)

Jokiel, P.L.; Rodgers, K.S.; Kuffner, I.B.; Andersson, A.J.; Cox, E.F.; MacKenzie, F.T.

2008-01-01

A long-term (10 months) controlled experiment was conducted to test the impact of increased partial pressure of carbon dioxide (pCO2) on common calcifying coral reef organisms. The experiment was conducted in replicate continuous flow coral reef mesocosms flushed with unfiltered sea water from Kaneohe Bay, Oahu, Hawaii. Mesocosms were located in full sunlight and experienced diurnal and seasonal fluctuations in temperature and sea water chemistry characteristic of the adjacent reef flat. Treatment mesocosms were manipulated to simulate an increase in pCO2 to levels expected in this century [midday pCO2 levels exceeding control mesocosms by 365 ?? 130 ??atm (mean ?? sd)]. Acidification had a profound impact on the development and growth of crustose coralline algae (CCA) populations. During the experiment, CCA developed 25% cover in the control mesocosms and only 4% in the acidified mesocosms, representing an 86% relative reduction. Free-living associations of CCA known as rhodoliths living in the control mesocosms grew at a rate of 0.6 g buoyant weight year-1 while those in the acidified experimental treatment decreased in weight at a rate of 0.9 g buoyant weight year-1, representing a 250% difference. CCA play an important role in the growth and stabilization of carbonate reefs, so future changes of this magnitude could greatly impact coral reefs throughout the world. Coral calcification decreased between 15% and 20% under acidified conditions. Linear extension decreased by 14% under acidified conditions in one experiment. Larvae of the coral Pocillopora damicornis were able to recruit under the acidified conditions. In addition, there was no significant difference in production of gametes by the coral Montipora capitata after 6 months of exposure to the treatments. ?? 2008 Springer-Verlag.

Mesopredator trophodynamics on thermally stressed coral reefs

Science.gov (United States)

Hempson, Tessa N.; Graham, Nicholas A. J.; MacNeil, M. Aaron; Hoey, Andrew S.; Almany, Glenn R.

2018-03-01

Ecosystems are becoming vastly modified through disturbance. In coral reef ecosystems, the differential susceptibility of coral taxa to climate-driven bleaching is predicted to shift coral assemblages towards reefs with an increased relative abundance of taxa with high thermal tolerance. Many thermally tolerant coral species are characterised by low structural complexity, with reduced habitat niche space for the small-bodied coral reef fishes on which piscivorous mesopredators feed. This study used a patch reef array to investigate the potential impacts of climate-driven shifts in coral assemblages on the trophodynamics of reef mesopredators and their prey communities. The `tolerant' reef treatment consisted only of coral taxa of low susceptibility to bleaching, while `vulnerable' reefs included species of moderate to high thermal vulnerability. `Vulnerable' reefs had higher structural complexity, and the fish assemblages that established on these reefs over 18 months had higher species diversity, abundance and biomass than those on `tolerant' reefs. Fish assemblages on `tolerant' reefs were also more strongly influenced by the introduction of a mesopredator ( Cephalopholis boenak). Mesopredators on `tolerant' reefs had lower lipid content in their muscle tissue by the end of the 6-week experiment. Such sublethal energetic costs can compromise growth, fecundity, and survivorship, resulting in unexpected population declines in long-lived mesopredators. This study provides valuable insight into the altered trophodynamics of future coral reef ecosystems, highlighting the potentially increased vulnerability of reef fish assemblages to predation as reef structure declines, and the cost of changing prey availability on mesopredator condition.

Notes on common macrobenthic reef invertebrates of Tubbataha Reefs Natural Park, Philippines

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Jean Beth S. Jontila

2012-12-01

Full Text Available Macrobenthic reef invertebrates are important reef health indicators and fishery resources but are not very well documented in Tubbataha Reefs Natural Park. To provide notes on the species composition and the abundance and size of commonly encountered macrobenthic reef invertebrates, belt transects survey in intertidal, shallow, and deep subtidal reef habitats were conducted. In total, 18 species were recorded, six of which were echinoderms and 12 were mollusks, which include the rare giant clam Hippopusporcellanus. Only the giant clam Tridacna crocea and the top shell Trochus niloticus occurred in all seven permanent monitoring sites but the two species varied in densities across depths. There was also an outbreak of crown-of-thorns (COTs sea stars in some sites. The large variation in the density of each species across sites and depths suggests niche differences, overharvesting, or their recovery fromhaving been overly exploited. Separate monitoring areas for each commercially important species are suggested to determine how their populations respond to poaching and their implications on the park’s long term management.

Comparison of retracked coastal altimetry sea levels against high frequency radar on the continental shelf of the Great Barrier Reef, Australia

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Idris, Nurul Hazrina; Deng, Xiaoli; Idris, Nurul Hawani

2017-07-01

Comparison of Jason-1 altimetry retracked sea levels and high frequency (HF) radar velocity is examined within the region of the Great Barrier Reef, Australia. The comparison between both datasets is not direct because the altimetry derives only the geostrophic component, while the HF radar velocity includes information on both geostrophic and ageostrophic components, such as tides and winds. The comparison of altimetry and HF radar data is performed based on the parameter of surface velocity inferred from both datasets. The results show that 48% (10 out of 21 cases) of data have high (≥0.5) spatial correlation. The mean of spatial correlation for all 21 cases is 0.43. This value is within the range (0.42 to 0.5) observed by other studies. Low correlation is observed due to disagreement in the trend of velocity signals in which sometimes they have contradictions in the signal direction and the position of the peak is shifted. In terms of standard deviation of difference and root mean square error, both datasets show reasonable agreement with ≤2.5 cm s-1.

Fish attraction to artificial reefs not always harmful: a simulation study.

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Smith, James A; Lowry, Michael B; Suthers, Iain M

2015-10-01

The debate on whether artificial reefs produce new fish or simply attract existing fish biomass continues due to the difficulty in distinguishing these processes, and there remains considerable doubt as to whether artificial reefs are a harmful form of habitat modification. The harm typically associated with attraction is that fish will be easier to harvest due to the existing biomass aggregating at a newly deployed reef. This outcome of fish attraction has not progressed past an anecdotal form, however, and is always perceived as a harmful process. We present a numerical model that simulates the effect that a redistributed fish biomass, due to an artificial reef, has on fishing catch per unit effort (CPUE). This model can be used to identify the scenarios (in terms of reef, fish, and harvest characteristics) that pose the most risk of exploitation due to fish attraction. The properties of this model were compared to the long-standing predictions by Bohnsack (1989) on the factors that increase the risk or the harm of attraction. Simulations revealed that attraction is not always harmful because it does not always increase maximum fish density. Rather, attraction sometimes disperses existing fish biomass making them harder to catch. Some attraction can be ideal, with CPUE lowest when attraction leads to an equal distribution of biomass between natural and artificial reefs. Simulations also showed that the outcomes from attraction depend on the characteristics of the target fish species, such that transient or pelagic species are often at more risk of harmful attraction than resident species. Our findings generally agree with Bohnsack's predictions, although we recommend distinguishing "mobility" and "fidelity" when identifying species most at risk from attraction, as these traits had great influence on patterns of harvest of attracted fish biomass.

Reef Sharks Exhibit Site-Fidelity and Higher Relative Abundance in Marine Reserves on the Mesoamerican Barrier Reef

Science.gov (United States)

Bond, Mark E.; Babcock, Elizabeth A.; Pikitch, Ellen K.; Abercrombie, Debra L.; Lamb, Norlan F.; Chapman, Demian D.

2012-01-01

Carcharhinid sharks can make up a large fraction of the top predators inhabiting tropical marine ecosystems and have declined in many regions due to intense fishing pressure. There is some support for the hypothesis that carcharhinid species that complete their life-cycle within coral reef ecosystems, hereafter referred to as “reef sharks”, are more abundant inside no-take marine reserves due to a reduction in fishing pressure (i.e., they benefit from marine reserves). Key predictions of this hypothesis are that (a) individual reef sharks exhibit high site-fidelity to these protected areas and (b) their relative abundance will generally be higher in these areas compared to fished reefs. To test this hypothesis for the first time in Caribbean coral reef ecosystems we combined acoustic monitoring and baited remote underwater video (BRUV) surveys to measure reef shark site-fidelity and relative abundance, respectively. We focused on the Caribbean reef shark (Carcharhinus perezi), the most common reef shark in the Western Atlantic, at Glover's Reef Marine Reserve (GRMR), Belize. Acoustically tagged sharks (N = 34) were detected throughout the year at this location and exhibited strong site-fidelity. Shark presence or absence on 200 BRUVs deployed at GRMR and three other sites (another reserve site and two fished reefs) showed that the factor “marine reserve” had a significant positive effect on reef shark presence. We rejected environmental factors or site-environment interactions as predominant drivers of this pattern. These results are consistent with the hypothesis that marine reserves can benefit reef shark populations and we suggest new hypotheses to determine the underlying mechanism(s) involved: reduced fishing mortality or enhanced prey availability. PMID:22412965

Diving down the reefs? Intensive diving tourism threatens the reefs of the northern Red Sea

DEFF Research Database (Denmark)

Hasler-Sheetal, Harald; Ott, Jörg A.

2008-01-01

Intensive recreational SCUBA diving threatens coral reef ecosystems. The reefs at Dahab, South Sinai, Egypt, are among the world’s most dived (>30,000dives y−1). We compared frequently dived sites to sites with no or little diving. Benthic communities and condition of corals were examined...... to intensive SCUBA diving showed a significantly higher number of broken and damaged corals and significantly lower coral cover. Reef crest coral communities were significantly more affected than those of the reef slope: 95% of the broken colonies were branching ones. No effect of diving on the abundance...... by the point intercept sampling method in the reef crest zone (3 m) and reef slope zone (12 m). Additionally, the abundance of corallivorous and herbivorous fish was estimated based on the visual census method. Sediments traps recorded the sedimentation rates caused by SCUBA divers. Zones subject...

Artificial Reefs in Motion: Legacy of changes and degradation at the Redbird Reef Site

Science.gov (United States)

Trembanis, A. C.; DuVal, C.; Peter, B.

2016-12-01

Artificial reefs are used for a variety of purposes at sites throughout the U.S. and around the globe, yet little, if any, long-term monitoring has been conducted with the goal of understanding inter-annual changes to the emplaced structures. Throughout the U.S. Mid-Atlantic region, several programs utilized retired subway cars as disposal structures to form artificial reefs. One such site, known as site 11, or "Redbird Reef", is located off the coast of Delaware and was at one time home to 997 former NYC subway cars. Opportunistic sonar surveys at the site have been conducted between 2008 and 2016 providing one of the most extensive and repeated mapping studies for this type of reef. Previous studies conducted by our group at the site have focused on understanding wave orbital ripple dynamics and scour patterns. In this present study, we analyze the changes apparent at the site itself, focused on the storm-response dynamics of the subway cars. Results have shown that Superstorm Sandy in 2012 produced dramatic changes to the reef structures resulting in the total or partial destruction of eight subway cars within a small (.45 x .2km) portion of the reef site. Winter Storm Jonas in 2016 resulted in the destruction of fewer cars, but rotated a previously static 47m long Navy barge nearly 60 degrees. Once destroyed or collapsed by waves the subway cars go from providing positive structural relief and thus beneficial habitat above the surrounding seabed to being reduced to scattered low relief marine debris. A once popular consideration for reef material, the event and inter-annual decay of subway cars as observed at the Redbird reef provides both a stark indication of the power of storm dynamics on the inner-shelf and a cautionary tale with regards to the selection of seabed reef material.

DIVERSITY OF REEF FISH FUNGSIONAL GROUPS IN TERMS OF CORAL REEF RESILIENCES

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Isa Nagib edrus

2017-01-01

Full Text Available Infrastructure development in the particular sites of  Seribu Islands as well as those in main land of Jakarta City increased with coastal population this phenomenon is likely to increase the effects to the adjacent coral waters of Seribu Islands.  Chemical pollutants, sedimentation, and domestic wastes are the common impact and threatening, the survival of coral reef ecosystem. Coral reef resiliences naturaly remained on their processes under many influences of supporting factors. One of the major factor is the role of reef fish functional groups on controling algae growth to recolonize coral juveniles. The  aim of this study to obtain data of a herbivory and other fish functional groups of reef fishes in the Pari Islands that are resilience indicators, or that may indicate the effectiveness of management actions. A conventional scientific approach on fish diversity and abundance data gathering was conducted by the underwater visual cencus. Diversity values of the reef fish functional groups, such as the abundance of individual fish including species, were collected and tabulated by classes and weighted as a baseline to understand the resilience of coral reed based on Obura and Grimsditch (2009 techniques. The results succesfully identified several fish functional groups such as harbivores (21 species, carnivores (13 species and fish indicator (5 species occurred in the area. Regarding the aspects of fish density and its diversity, especially herbivorous fish functional group, were presumably in the state of rarely available to support the coral reef resiliences. Resilience indices ranged from 1 (low level to 3 (moderate level and averages of the quality levels ranged from 227 to 674. These levels were inadequate to support coral reef recolonization.

Will Coral Islands maintain their growth over the next century? A deterministic model of sediment availability at Lady Elliot Island, Great Barrier Reef.

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Sarah Hamylton

Full Text Available A geomorphic assessment of reef system calcification is conducted for past (3200 Ka to present, present and future (2010-2100 time periods. Reef platform sediment production is estimated at 569 m3 yr-1 using rate laws that express gross community carbonate production as a function of seawater aragonite saturation, community composition and rugosity and incorporating estimates of carbonate removal from the reef system. Key carbonate producers including hard coral, crustose coralline algae and Halimeda are mapped accurately (mean R2 = 0.81. Community net production estimates correspond closely to independent census-based estimates made in-situ (R2 = 0.86. Reef-scale outputs are compared with historic rates of production generated from (i radiocarbon evidence of island deposition initiation around 3200 years ago, and (ii island volume calculated from a high resolution island digital elevation model. Contemporary carbonate production rates appear to be remarkably similar to historical values of 573 m3 yr-1. Anticipated future seawater chemistry parameters associated with an RCP8.5 emissions scenario are employed to model rates of net community calcification for the period 2000-2100 on the basis of an inorganic aragonite precipitation law, under the assumption of constant benthic community character. Simulations indicate that carbonate production will decrease linearly to a level of 118 m3 yr-1 by 2100 and that by 2150 aragonite saturation levels may no longer support the positive budgetary status necessary to sustain island accretion. Novel aspects of this assessment include the development of rate law parameters to realistically represent the variable composition of coral reef benthic carbonate producers, incorporation of three dimensional rugosity of the entire reef platform and the coupling of model outputs with both historical radiocarbon dating evidence and forward hydrochemical projections to conduct an assessment of island evolution

Will Coral Islands maintain their growth over the next century? A deterministic model of sediment availability at Lady Elliot Island, Great Barrier Reef.

Science.gov (United States)

Hamylton, Sarah

2014-01-01

A geomorphic assessment of reef system calcification is conducted for past (3200 Ka to present), present and future (2010-2100) time periods. Reef platform sediment production is estimated at 569 m3 yr-1 using rate laws that express gross community carbonate production as a function of seawater aragonite saturation, community composition and rugosity and incorporating estimates of carbonate removal from the reef system. Key carbonate producers including hard coral, crustose coralline algae and Halimeda are mapped accurately (mean R2 = 0.81). Community net production estimates correspond closely to independent census-based estimates made in-situ (R2 = 0.86). Reef-scale outputs are compared with historic rates of production generated from (i) radiocarbon evidence of island deposition initiation around 3200 years ago, and (ii) island volume calculated from a high resolution island digital elevation model. Contemporary carbonate production rates appear to be remarkably similar to historical values of 573 m3 yr-1. Anticipated future seawater chemistry parameters associated with an RCP8.5 emissions scenario are employed to model rates of net community calcification for the period 2000-2100 on the basis of an inorganic aragonite precipitation law, under the assumption of constant benthic community character. Simulations indicate that carbonate production will decrease linearly to a level of 118 m3 yr-1 by 2100 and that by 2150 aragonite saturation levels may no longer support the positive budgetary status necessary to sustain island accretion. Novel aspects of this assessment include the development of rate law parameters to realistically represent the variable composition of coral reef benthic carbonate producers, incorporation of three dimensional rugosity of the entire reef platform and the coupling of model outputs with both historical radiocarbon dating evidence and forward hydrochemical projections to conduct an assessment of island evolution through time

Oceanic forcing of coral reefs.

Science.gov (United States)

Lowe, Ryan J; Falter, James L

2015-01-01

Although the oceans play a fundamental role in shaping the distribution and function of coral reefs worldwide, a modern understanding of the complex interactions between ocean and reef processes is still only emerging. These dynamics are especially challenging owing to both the broad range of spatial scales (less than a meter to hundreds of kilometers) and the complex physical and biological feedbacks involved. Here, we review recent advances in our understanding of these processes, ranging from the small-scale mechanics of flow around coral communities and their influence on nutrient exchange to larger, reef-scale patterns of wave- and tide-driven circulation and their effects on reef water quality and perceived rates of metabolism. We also examine regional-scale drivers of reefs such as coastal upwelling, internal waves, and extreme disturbances such as cyclones. Our goal is to show how a wide range of ocean-driven processes ultimately shape the growth and metabolism of coral reefs.

40 CFR 230.44 - Coral reefs.

Science.gov (United States)

2010-07-01

... 40 Protection of Environment 24 2010-07-01 2010-07-01 false Coral reefs. 230.44 Section 230.44... Aquatic Sites § 230.44 Coral reefs. (a) Coral reefs consist of the skeletal deposit, usually of calcareous... organisms present in growing portions of the reef. (b) Possible loss of values: The discharge of dredged or...

Cumulative Human Impacts on Coral Reefs: Assessing Risk and Management Implications for Brazilian Coral Reefs

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Rafael A. Magris

2018-04-01

Full Text Available Effective management of coral reefs requires strategies tailored to cope with cumulative disturbances from human activities. In Brazil, where coral reefs are a priority for conservation, intensifying threats from local and global stressors are of paramount concern to management agencies. Using a cumulative impact assessment approach, our goal was to inform management actions for coral reefs in Brazil by assessing their exposure to multiple stressors (fishing, land-based activities, coastal development, mining, aquaculture, shipping, and global warming. We calculated an index of the risk to cumulative impacts: (i assuming uniform sensitivity of coral reefs to stressors; and (ii using impact weights to reflect varying tolerance levels of coral reefs to each stressor. We also predicted the index in both the presence and absence of global warming. We found that 16% and 37% of coral reefs had high to very high risk of cumulative impacts, without and with information on sensitivity respectively, and 42% of reefs had low risk to cumulative impacts from both local and global stressors. Our outputs are the first comprehensive spatial dataset of cumulative impact on coral reefs in Brazil, and show that areas requiring attention mostly corresponded to those closer to population centres. We demonstrate how the relationships between risks from local and global stressors can be used to derive strategic management actions.

Correlation Between Existence of Reef Sharks with Abundance of Reef Fishes in South Waters of Morotai Island (North Moluccas)

Science.gov (United States)

Mukharror, Darmawan Ahmad; Tiara Baiti, Isnaini; Ichsan, Muhammad; Pridina, Niomi; Triutami, Sanny

2017-10-01

Despite increasing academic research citation on biology, abundance, and the behavior of the blacktip reef sharks, the influence of reef fish population on the density of reef sharks: Carcharhinus melanopterus and Triaenodon obesus population in its habitat were largely unassessed. This present study examined the correlation between abundance of reef fishes family/species with the population of reef sharks in Southern Waters of Morotai Island. The existence of reef sharks was measured with the Audible Stationary Count (ASC) methods and the abundance of reef fishes was surveyed using Underwater Visual Census (UVC) combined with Diver Operated Video (DOV) census. The coefficient of Determination (R2) was used to investigate the degree of relationships between sharks and the specific reef fishes species. The research from 8th April to 4th June 2015 showed the strong positive correlations between the existence of reef sharks with abundance of reef fishes. The correlation values between Carcharhinus melanopterus/Triaenodon obesus with Chaetodon auriga was 0.9405, blacktip/whitetip reef sharks versus Ctenochaetus striatus was 0.9146, and Carcharhinus melanopterus/Triaenodon obesus to Chaetodon kleinii was 0.8440. As the shark can be worth more alive for shark diving tourism than dead in a fish market, the abundance of these reef fishes was important as an early indication parameter of shark existence in South Water of Morotai Island. In the long term, this highlights the importance of reef fishes abundance management in Morotai Island’s Waters to enable the establishment of appropriate and effective reef sharks conservation.

Physiology can contribute to better understanding, management, and conservation of coral reef fishes.

Science.gov (United States)

Illing, Björn; Rummer, Jodie L

2017-01-01

Coral reef fishes, like many other marine organisms, are affected by anthropogenic stressors such as fishing and pollution and, owing to climate change, are experiencing increasing water temperatures and ocean acidification. Against the backdrop of these various stressors, a mechanistic understanding of processes governing individual organismal performance is the first step for identifying drivers of coral reef fish population dynamics. In fact, physiological measurements can help to reveal potential cause-and-effect relationships and enable physiologists to advise conservation management by upscaling results from cellular and individual organismal levels to population levels. Here, we highlight studies that include physiological measurements of coral reef fishes and those that give advice for their conservation. A literature search using combined physiological, conservation and coral reef fish key words resulted in ~1900 studies, of which only 99 matched predefined requirements. We observed that, over the last 20 years, the combination of physiological and conservation aspects in studies on coral reef fishes has received increased attention. Most of the selected studies made their physiological observations at the whole organism level and used their findings to give conservation advice on population dynamics, habitat use or the potential effects of climate change. The precision of the recommendations differed greatly and, not surprisingly, was least concrete when studies examined the effects of projected climate change scenarios. Although more and more physiological studies on coral reef fishes include conservation aspects, there is still a lack of concrete advice for conservation managers, with only very few published examples of physiological findings leading to improved management practices. We conclude with a call to action to foster better knowledge exchange between natural scientists and conservation managers to translate physiological findings more

Effects of seawater acidification on a coral reef meiofauna community

Science.gov (United States)

Sarmento, V. C.; Souza, T. P.; Esteves, A. M.; Santos, P. J. P.

2015-09-01

Despite the increasing risk that ocean acidification will modify benthic communities, great uncertainty remains about how this impact will affect the lower trophic levels, such as members of the meiofauna. A mesocosm experiment was conducted to investigate the effects of water acidification on a phytal meiofauna community from a coral reef. Community samples collected from the coral reef subtidal zone (Recife de Fora Municipal Marine Park, Porto Seguro, Bahia, Brazil), using artificial substrate units, were exposed to a control pH (ambient seawater) and to three levels of seawater acidification (pH reductions of 0.3, 0.6, and 0.9 units below ambient) and collected after 15 and 30 d. After 30 d of exposure, major changes in the structure of the meiofauna community were observed in response to reduced pH. The major meiofauna groups showed divergent responses to acidification. Harpacticoida and Polychaeta densities did not show significant differences due to pH. Nematoda, Ostracoda, Turbellaria, and Tardigrada exhibited their highest densities in low-pH treatments (especially at the pH reduction of 0.6 units, pH 7.5), while harpacticoid nauplii were strongly negatively affected by low pH. This community-based mesocosm study supports previous suggestions that ocean acidification induces important changes in the structure of marine benthic communities. Considering the importance of meiofauna in the food web of coral reef ecosystems, the results presented here demonstrate that the trophic functioning of coral reefs is seriously threatened by ocean acidification.

Insights into the history and timing of post-European land use disturbance on sedimentation rates in catchments draining to the Great Barrier Reef.

Science.gov (United States)

Bartley, Rebecca; Thompson, Chris; Croke, Jacky; Pietsch, Tim; Baker, Brett; Hughes, Kate; Kinsey-Henderson, Anne

2018-06-01

Sediment runoff has been cited as a major contributor to the declining health of the Great Barrier Reef (GBR), however, climate and land use drivers have not been jointly evaluated. This study used alluvial archives from fluvial benches in two tributaries of the Upper Burdekin catchment together with the best available land use history and climate proxy records to provide insights into the timing of depositional events in this region over the past 500 years. This study suggests that mining and the increased runoff variability in the latter half of the nineteenth century are the likely sources of the original excess sediment that was used to build the bench features in these catchments. Grazing also contributed to increased bench sedimentation prior to 1900, however, the contribution of grazing was likely more significant in the second half of the 20th century, and continues to be a dominant land use contributor today. Copyright © 2018 Elsevier Ltd. All rights reserved.

Global microbialization of coral reefs.

Science.gov (United States)

Haas, Andreas F; Fairoz, Mohamed F M; Kelly, Linda W; Nelson, Craig E; Dinsdale, Elizabeth A; Edwards, Robert A; Giles, Steve; Hatay, Mark; Hisakawa, Nao; Knowles, Ben; Lim, Yan Wei; Maughan, Heather; Pantos, Olga; Roach, Ty N F; Sanchez, Savannah E; Silveira, Cynthia B; Sandin, Stuart; Smith, Jennifer E; Rohwer, Forest

2016-04-25

Microbialization refers to the observed shift in ecosystem trophic structure towards higher microbial biomass and energy use. On coral reefs, the proximal causes of microbialization are overfishing and eutrophication, both of which facilitate enhanced growth of fleshy algae, conferring a competitive advantage over calcifying corals and coralline algae. The proposed mechanism for this competitive advantage is the DDAM positive feedback loop (dissolved organic carbon (DOC), disease, algae, microorganism), where DOC released by ungrazed fleshy algae supports copiotrophic, potentially pathogenic bacterial communities, ultimately harming corals and maintaining algal competitive dominance. Using an unprecedented data set of >400 samples from 60 coral reef sites, we show that the central DDAM predictions are consistent across three ocean basins. Reef algal cover is positively correlated with lower concentrations of DOC and higher microbial abundances. On turf and fleshy macroalgal-rich reefs, higher relative abundances of copiotrophic microbial taxa were identified. These microbial communities shift their metabolic potential for carbohydrate degradation from the more energy efficient Embden-Meyerhof-Parnas pathway on coral-dominated reefs to the less efficient Entner-Doudoroff and pentose phosphate pathways on algal-dominated reefs. This 'yield-to-power' switch by microorganism directly threatens reefs via increased hypoxia and greater CO2 release from the microbial respiration of DOC.

Novel tradable instruments in the conservation of coral reefs, based on the coral gardening concept for reef restoration.

Science.gov (United States)

Rinkevich, Baruch

2015-10-01

Nearly all coral reefs bordering nations have experienced net losses in reef biodiversity, goods and services, even without considering the ever-developing global change impacts. In response, this overview wishes to reveal through prospects of active reef-restoration, the currently non-marketed or poorly marketed reef services, focusing on a single coral species (Stylophora pistillata). It is implied that the integration of equity capitals and other commodification with reef-restoration practices will improve total reef services. Two tiers of market-related activities are defined, the traditional first-tier instruments (valuating costs/gains for extracting tradable goods and services) and novel second-tier instruments (new/expanded monetary tools developed as by-products of reef restoration measures). The emerging new suite of economic mechanisms based on restoration methodologies could be served as an incentive for ecosystem conservation, enhancing the sum values of all services generated by coral reefs, where the same stocks of farmed/transplanted coral colonies will be used as market instruments. I found that active restoration measures disclose 12 classes of second-tier goods and services, which may partly/wholly finance restoration acts, bringing to light reef capitalizations that allow the expansion of markets with products that have not been considered before. The degree to which the second tier of market-related services could buffer coral-reef degradation is still unclear and would vary with different reef types and in various reef restoration scenarios; however, reducing the uncertainty associated with restoration. It is expected that the expansion of markets with the new products and the enhancement of those already existing will be materialized even if reef ecosystems will recover into different statuses. Copyright © 2015 Elsevier Ltd. All rights reserved.

ReefLink Database: A decision support tool for Linking Coral Reefs and Society Through Systems Thinking

Science.gov (United States)

Coral reefs provide the ecological foundation for productive and diverse fish and invertebrate communities that support multibillion dollar reef fishing and tourism industries. Yet reefs are threatened by growing coastal development, climate change, and over-exploitation. A key i...

Macroalgae in the coral reefs of Eilat (Gulf of Aqaba, Red Sea) as a possible indicator of reef degradation

International Nuclear Information System (INIS)

Bahartan, Karnit; Zibdah, Mohammad; Ahmed, Yousef; Israel, Alvaro; Brickner, Itzchak; Abelson, Avigdor

2010-01-01

The current state of health of the coral reefs in the northern Gulf of Aqaba (Red Sea), notably the Eilat reefs, is under debate regarding both their exact condition and the causes of degradation. A dearth of earlier data and unequivocal reliable indices are the major problems hinder a clear understanding of the reef state. Our research objective was to examine coral-algal dynamics as a potential cause and an indication of reef degradation. The community structure of stony corals and algae along the northern Gulf of Aqaba reveal non-seasonal turf algae dominancy in the shallow Eilat reefs (up to 72%), while the proximate Aqaba reefs present negligible turf cover (<6%). We believe that turf dominancy can indicate degradation in these reefs, based on the reduction in essential reef components followed by proliferation of perennial turf algae. Our findings provide further evidence for the severe state of the Eilat coral reefs.

NMFS Reef Survey Forms

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — The Reef Environmental Survey Project (REEF) mission to educate and enlist divers in the conservation of marine habitats is accomplished primarily through its Fish...

Coral reefs - Specialized ecosystems

Digital Repository Service at National Institute of Oceanography (India)

Wafar, M.V.M.

This paper discusses briefly some aspects that characterize and differentiate coral reef ecosystems from other tropical marine ecosystems. A brief account on the resources that are extractable from coral reefs, their susceptibility to natural...

Coral reef fish assemblages at Clipperton Atoll (Eastern Tropical Pacific and their relationship with coral cover

Directory of Open Access Journals (Sweden)

Aurora M. Ricart

2016-11-01

Full Text Available Clipperton Atoll, one of the most isolated coral reefs worldwide, is of great scientific interest due to its geomorphology and high levels of endemism. This study explored the reef fish assemblage structure of Clipperton Atoll and its relationship with live coral cover. Nine stations were sampled at three sites and three depths (6, 12 and 20 m around the reef, measuring fish species richness and biomass and hermatypic coral cover (at genus level. We evaluated variation in species richness, biomass and diversity of fish assemblages among sites and depths, as well as the relationship between the entire fish assemblage composition and live coral cover. The results showed that species richness and biomass were similar among sites, but differed across depths, increasing with depth. In contrast, diversity differed among sites but not among depths. Multivariate analyses indicated that fish assemblage composition differed among sites and depths in relation to changes in cover of coral of the genera Pocillopora, Porites, Pavona and Leptoseris, which dominate at different depths. The results showed that fish species richness and diversity were low at Clipperton Atoll and that, in isolated coral reefs with a low habitat heterogeneity and low human disturbance, live coral cover has a significant influence on the spatial variation of the reef fish assemblages. This study highlights the importance of coral habitat structure in shaping coral reef fish assemblages.

Modelling the fate of marine debris along a complex shoreline: Lessons from the Great Barrier Reef

Science.gov (United States)

Critchell, K.; Grech, A.; Schlaefer, J.; Andutta, F. P.; Lambrechts, J.; Wolanski, E.; Hamann, M.

2015-12-01

The accumulation of floating anthropogenic debris in marine and coastal areas has environmental, economic, aesthetic, and human health impacts. Until now, modelling the transport of such debris has largely been restricted to the large-scales of open seas. We used oceanographic modelling to identify potential sites of debris accumulation along a rugged coastline with headlands, islands, rocky coasts and beaches. Our study site was the Great Barrier Reef World Heritage Area that has an emerging problem with debris accumulation. We found that the classical techniques of modelling the transport of floating debris models are only moderately successful due to a number of unknowns or assumptions, such as the value of the wind drift coefficient, the variability of the oceanic forcing and of the wind, the resuspension of some floating debris by waves, and the poorly known relative contribution of floating debris from urban rivers and commercial and recreational shipping. Nevertheless the model was successful in reproducing a number of observations such as the existence of hot spots of accumulation. The orientation of beaches to the prevailing wind direction affected the accumulation rate of debris. The wind drift coefficient and the exact timing of the release of the debris at sea affected little the movement of debris originating from rivers but it affected measurably that of debris originating from ships. It was thus possible to produce local hotspot maps for floating debris, especially those originating from rivers. Such modelling can be used to inform local management decisions, and it also identifies likely priority research areas to more reliably predict the trajectory and landing points of floating debris.

Coral Reef and Hardbottom from Unified Florida Reef Tract Map (NODC Accession 0123059)

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — This dataset is a subset of the Unified Map representing Coral reef and Hardbottom areas. Version 1.1 - December 2013. The Unified Florida Reef Tract Map (Unified...

Ontogenetic dietary changes of coral reef fishes in the mangrove-seagress-reef continuum: stable isotope and gut-content analysis

NARCIS (Netherlands)

Cocheret de la Morinière, E.; Pollux, B.J.A.; Nagelkerken, I.; Hemminga, M.A.; Huiskes, A.H.L.; Van der Velde, G.

2003-01-01

Juveniles of a number of reef fish species develop in shallow-water 'nursery' habitats such as mangroves and seagrass beds, and then migrate to the coral reef. This implies that some reef fish species are distributed over the mangrove-seagrass-reef continuum in subpopulations with different size

Spatial and tidal variation in food supply to shallow cold-water coral reefs of the Mingulay Reef complex (Outer Hebrides, Scotland)

NARCIS (Netherlands)

Duineveld, G.C.A.; Jeffreys, R.M.; Lavaleye, M.S.S.; Davies, A.J.; Bergman, M.J.N.; Watmough, T.; Witbaard, R.

2012-01-01

The finding of a previously undescribed cold-water coral reef (Banana Reef) in the Scottish Mingulay reef complex, with denser coverage of living Lophelia pertusa than the principal Mingulay 1 Reef, was the incentive for a comparative study of the food supply to the 2 reefs. Suspended particulate

The Great Barrier Reef World Heritage Area seagrasses: Managing this iconic Australian ecosystem resource for the future

Science.gov (United States)

Coles, Robert G.; Rasheed, Michael A.; McKenzie, Len J.; Grech, Alana; York, Paul H.; Sheaves, Marcus; McKenna, Skye; Bryant, Catherine

2015-02-01

The Great Barrier Reef World Heritage Area (GBRWHA) includes one of the world's largest areas of seagrass (35,000 km2) encompassing approximately 20% of the world's species. Mapping and monitoring programs sponsored by the Australian and Queensland Governments and Queensland Port Authorities have tracked a worrying decrease in abundance and area since 2007. This decline has almost certainly been the result of a series of severe tropical storms and associated floods exacerbating existing human induced stressors. A complex variety of marine and terrestrial management actions and plans have been implemented to protect seagrass and other habitats in the GBRWHA. For seagrasses, these actions are inadequate. They provide an impression of effective protection of seagrasses; reduce the sense of urgency needed to trigger action; and waste the valuable and limited supply of "conservation capital". There is a management focus on ports, driven by public concerns about high profile development projects, which exaggerates the importance of these relatively concentrated impacts in comparison to the total range of threats and stressors. For effective management of seagrass at the scale of the GBRWHA, more emphasis needs to be placed on the connectivity between seagrass meadow health, watersheds, and all terrestrial urban and agricultural development associated with human populations. The cumulative impacts to seagrass from coastal and marine processes in the GBRWHA are not evenly distributed, with a mosaic of high and low vulnerability areas. This provides an opportunity to make choices for future coastal development plans that minimise stress on seagrass meadows.

Climate change in the Cairns and Great Barrier Reef region. Scope and Focus for an Integrated Assessment

International Nuclear Information System (INIS)

Crimp, S.; Balston, J.; Ash, A.; Anderson-Berry, L.; Done, T.; Greiner, R.; Hilbert, D.; Howden, M.; Jones, R.; Stokes, C.; Stoeckl, N.; Sutherst, B.; Whetton, P.

2004-07-01

This study was undertaken to determine the scope and focus for an integrated assessment of climate change impacts on, and adaptation options for, the Cairns Great Barrier Reef (CGBR) region. To achieve this, the authors employed both technical expertise and regional stakeholder input. This document describes the study objectives and the process used to meet these objectives, and provides an overview of the CGBR region, the views of technical experts on potential climate change impacts, stakeholder prioritisation of impacts and adaptation options, a list of perceived knowledge gaps, and a recommended structure for a future integrated assessment in the region. The aim of the study was to determine the scope and focus for an integrated regional assessment of climate change impacts on, and adaptation options for, the CGBR region. The key objectives of the study were: Define and describe the study region; Develop a process for the study, which includes key stakeholders in the region; Prepare a comprehensive list of the regional stakeholders; Brief regional stakeholders about potential climate changes in the region; Gain insight from stakeholders into the climatic dependencies of key sectors and issues in the region (agriculture, fishing, forestry, tourism, natural ecosystems, infrastructure, pests, diseases and human health); Identify possible adaptation and/or amelioration strategies for each sector; Identify synergies with other sectors, and possible barriers to undertaking climate change adaptation strategies; Identify knowledge gaps, research priorities and current activities that may need alteration or enhancement; Define the scope of a possible integrated assessment of climate change impacts on, and adaptation options for, the region

Cryptic Coral Reef Diversity Across the Pacific Assessed using Autonomous Reef Monitoring Structures and Multi-omic Methods

Science.gov (United States)

Ransome, E. J.; Timmers, M.; Hartmann, A.; Collins, A.; Meyer, C.

2016-02-01

Coral reefs harbor diverse and distinct eukaryotic, bacterial and viral communities, which are critically important for their success. The lack of standardized measures for comprehensively assessing reef diversity has been a major obstacle in understanding the complexity of eukaryotic and microbial associations, and the processes that drive ecosystem shifts on reefs. ARMS, which mimic the structural complexity of the reef using artificial settlement plates, were used to systematically measure reef biodiversity across the Indo-Pacific. This device allows for standardized sampling of reef microbes to metazoans, providing the opportunity to investigate the fundamental links between these groups at an ecosystem level. We integrate the use of traditional ecology methods with metagenomics and metabolomics (metabolic predictors) to quantify the taxonomic composition of one of the planet's most diverse ecosystems and to assess the fundamental links between these cryptic communities and ecosystem function along geographical and anthropogenic stress gradients.

Cyanobacteria in Coral Reef Ecosystems: A Review

Directory of Open Access Journals (Sweden)

L. Charpy

2012-01-01

Full Text Available Cyanobacteria have dominated marine environments and have been reef builders on Earth for more than three million years (myr. Cyanobacteria still play an essential role in modern coral reef ecosystems by forming a major component of epiphytic, epilithic, and endolithic communities as well as of microbial mats. Cyanobacteria are grazed by reef organisms and also provide nitrogen to the coral reef ecosystems through nitrogen fixation. Recently, new unicellular cyanobacteria that express nitrogenase were found in the open ocean and in coral reef lagoons. Furthermore, cyanobacteria are important in calcification and decalcification. All limestone surfaces have a layer of boring algae in which cyanobacteria often play a dominant role. Cyanobacterial symbioses are abundant in coral reefs; the most common hosts are sponges and ascidians. Cyanobacteria use tactics beyond space occupation to inhibit coral recruitment. Cyanobacteria can also form pathogenic microbial consortia in association with other microbes on living coral tissues, causing coral tissue lysis and death, and considerable declines in coral reefs. In deep lagoons, coccoid cyanobacteria are abundant and are grazed by ciliates, heteroflagellates, and the benthic coral reef community. Cyanobacteria produce metabolites that act as attractants for some species and deterrents for some grazers of the reef communities.

Pleistocene reef development in Bulukumba, South Sulawesi

Directory of Open Access Journals (Sweden)

Muhammad Imran Andi

2017-01-01

Full Text Available Quaternary reefs are commonly studied right now to explain climate change during that time. They act as a good archive of climate change, because their development is influenced by climate condition. The research area is located in the southern tip of Bulukumba Regency, South Sulawesi. The objective of this research is to define the development of the reef. Methods applied in this research are field survey of 4 line transects along reef cliff. Laboratory work is mostly on petrographic and biofacies analyses in order to reconstruct the reef development. Four reef biofacies have developed in this study namely 1 Coralgal framestone - wackestone, 2 Massive coral framestone facies, 3 Platylike coral Bindstone facies, and 4 Branching Coral Bafflestone facies. Based on the facies association and organism accumulation, the reefs are interpreted to be developed within a reef complex in a shallow marine environment.

National Coral Reef Monitoring Program: Assessing and Monitoring Cryptic Reef Diversity of Colonizing Marine Invertebrates using Autonomous Reef Monitoring Structure (ARMS) Deployed at Coral Reef Sites across American Samoa from 2012 to 2015

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Autonomous Reef Monitoring Structures (ARMS) are used to assess and monitor cryptic reef diversity of colonizing marine invertebrates in the Hawaiian and Mariana...

Photography of Coral Reefs from ISS

Science.gov (United States)

Robinson, Julie A.

2009-01-01

This viewgraph presentation reviews the uses of photography from the International Space Station (ISS) in studying Earth's coral reefs. The photographs include reefs in various oceans . The photographs have uses for science in assisting NASA mapping initiatives, distribution worldwide through ReefBase, and by biologist in the field.

Environmental quality and preservation; reefs, corals, and carbonate sands; guides to reef-ecosystem health and environment

Science.gov (United States)

Lidz, Barbara H.

2001-01-01

Introduction In recent years, the health of the entire coral reef ecosystem that lines the outer shelf off the Florida Keys has declined markedly. In particular, loss of those coral species that are the building blocks of solid reef framework has significant negative implications for economic vitality of the region. What are the reasons for this decline? Is it due to natural change, or are human activities (recreational diving, ship groundings, farmland runoff, nutrient influx, air-borne contaminants, groundwater pollutants) a contributing factor and if so, to what extent? At risk of loss are biologic resources of the reefs, including habitats for endangered species in shoreline mangroves, productive marine and wetland nurseries, and economic fisheries. A healthy reef ecosystem builds a protective offshore barrier to catastrophic wave action and storm surges generated by tropical storms and hurricanes. In turn, a healthy reef protects the homes, marinas, and infrastructure on the Florida Keys that have been designed to capture a lucrative tourism industry. A healthy reef ecosystem also protects inland agricultural and livestock areas of South Florida whose produce and meat feed much of the United States and other parts of the world. In cooperation with the National Oceanic and Atmospheric Administration's (NOAA) National Marine Sanctuary Program, the U.S. Geological Survey (USGS) continues longterm investigations of factors that may affect Florida's reefs. One of the first steps in distinguishing between natural change and the effects of human activities, however, is to determine how coral reefs have responded to past environmental change, before the advent of man. By so doing, accurate scientific information becomes available for Marine Sanctuary management to understand natural change and thus to assess and regulate potential human impact better. The USGS studies described here evaluate the distribution (location) and historic vitality (thickness) of Holocene

Cyanotoxins are not implicated in the etiology of coral black band disease outbreaks on Pelorus Island, Great Barrier Reef.

Science.gov (United States)

Glas, Martin S; Motti, Cherie A; Negri, Andrew P; Sato, Yui; Froscio, Suzanne; Humpage, Andrew R; Krock, Bernd; Cembella, Allan; Bourne, David G

2010-07-01

Cyanobacterial toxins (i.e. microcystins) produced within the microbial mat of coral black band disease (BBD) have been implicated in disease pathogenicity. This study investigated the presence of toxins within BBD lesions and other cyanobacterial patch (CP) lesions, which, in some instances ( approximately 19%), facilitated the onset of BBD, from an outbreak site at Pelorus Island on the inshore, central Great Barrier Reef (GBR). Cyanobacterial species that dominated the biomass of CP and BBD lesions were cultivated and identified, based on morphology and 16S rRNA gene sequences, as Blennothrix- and Oscillatoria-affiliated species, respectively, and identical to cyanobacterial sequences retrieved from previous molecular studies from this site. The presence of the cyanotoxins microcystin, cylindrospermopsin, saxitoxin, nodularin and anatoxin and their respective gene operons in field samples of CP and BBD lesions and their respective culture isolations was tested using genetic (PCR-based screenings), chemical (HPLC-UV, FTICR-MS and LC/MS(n)) and biochemical (PP2A) methods. Cyanotoxins and cyanotoxin synthetase genes were not detected in any of the samples. Cyanobacterial species dominant within CP and BBD lesions were phylogenetically distinct from species previously shown to produce cyanotoxins and isolated from BBD lesions. The results from this study demonstrate that cyanobacterial toxins appear to play no role in the pathogenicity of CP and BBD at this site on the GBR.

Cumulative Human Impacts on Coral Reefs: Assessing Risk and Management Implications for Brazilian Coral Reefs

OpenAIRE

Rafael A. Magris; Alana Grech; Robert L. Pressey

2018-01-01

Effective management of coral reefs requires strategies tailored to cope with cumulative disturbances from human activities. In Brazil, where coral reefs are a priority for conservation, intensifying threats from local and global stressors are of paramount concern to management agencies. Using a cumulative impact assessment approach, our goal was to inform management actions for coral reefs in Brazil by assessing their exposure to multiple stressors (fishing, land-based activities, coastal de...

Long-term monitoring of coral reef fish assemblages in the Western central pacific.

Science.gov (United States)

Heenan, Adel; Williams, Ivor D; Acoba, Tomoko; DesRochers, Annette; Kosaki, Randall K; Kanemura, Troy; Nadon, Marc O; Brainard, Russell E

2017-12-05

Throughout the tropics, coral reef ecosystems, which are critically important to people, have been greatly altered by humans. Differentiating human impacts from natural drivers of ecosystem state is essential to effective management. Here we present a dataset from a large-scale monitoring program that surveys coral reef fish assemblages and habitats encompassing the bulk of the US-affiliated tropical Pacific, and spanning wide gradients in both natural drivers and human impact. Currently, this includes >5,500 surveys from 39 islands and atolls in Hawaii (including the main and Northwestern Hawaiian Islands) and affiliated geo-political regions of American Samoa, the Commonwealth of the Northern Mariana Islands, Guam, and the Pacific Remote Islands Areas. The dataset spans 2010-2017, during which time, each region was visited at least every three years, and ~500-1,000 surveys performed annually. This standardised dataset is a powerful resource that can be used to understand how human, environmental and oceanographic conditions influence coral reef fish community structure and function, providing a basis for research to support effective management outcomes.

Impacts of Artificial Reefs on Surrounding Ecosystems

Science.gov (United States)

Manoukian, Sarine

Artificial reefs are becoming a popular biological and management component in shallow water environments characterized by soft seabed, representing both important marine habitats and tools to manage coastal fisheries and resources. An artificial reef in the marine environment acts as an open system with exchange of material and energy, altering the physical and biological characteristics of the surrounding area. Reef stability will depend on the balance of scour, settlement, and burial resulting from ocean conditions over time. Because of the unstable nature of sediments, they require a detailed and systematic investigation. Acoustic systems like high-frequency multibeam sonar are efficient tools in monitoring the environmental evolution around artificial reefs, whereas water turbidity can limit visual dive and ROV inspections. A high-frequency multibeam echo sounder offers the potential of detecting fine-scale distribution of reef units, providing an unprecedented level of resolution, coverage, and spatial definition. How do artificial reefs change over time in relation to the coastal processes? How accurately does multibeam technology map different typologies of artificial modules of known size and shape? How do artificial reefs affect fish school behavior? What are the limitations of multibeam technology for investigating fish school distribution as well as spatial and temporal changes? This study addresses the above questions and presents results of a new approach for artificial reef seafloor mapping over time, based upon an integrated analysis of multibeam swath bathymetry data and geoscientific information (backscatter data analysis, SCUBA observations, physical oceanographic data, and previous findings on the geology and sedimentation processes, integrated with unpublished data) from Senigallia artificial reef, northwestern Adriatic Sea (Italy) and St. Petersburg Beach Reef, west-central Florida continental shelf. A new approach for observation of fish

High refuge availability on coral reefs increases the vulnerability of reef-associated predators to overexploitation.

Science.gov (United States)

Rogers, Alice; Blanchard, Julia L; Newman, Steven P; Dryden, Charlie S; Mumby, Peter J

2018-02-01

Refuge availability and fishing alter predator-prey interactions on coral reefs, but our understanding of how they interact to drive food web dynamics, community structure and vulnerability of different trophic groups is unclear. Here, we apply a size-based ecosystem model of coral reefs, parameterized with empirical measures of structural complexity, to predict fish biomass, productivity and community structure in reef ecosystems under a broad range of refuge availability and fishing regimes. In unfished ecosystems, the expected positive correlation between reef structural complexity and biomass emerges, but a non-linear effect of predation refuges is observed for the productivity of predatory fish. Reefs with intermediate complexity have the highest predator productivity, but when refuge availability is high and prey are less available, predator growth rates decrease, with significant implications for fisheries. Specifically, as fishing intensity increases, predators in habitats with high refuge availability exhibit vulnerability to over-exploitation, resulting in communities dominated by herbivores. Our study reveals mechanisms for threshold dynamics in predators living in complex habitats and elucidates how predators can be food-limited when most of their prey are able to hide. We also highlight the importance of nutrient recycling via the detrital pathway, to support high predator biomasses on coral reefs. © 2018 by the Ecological Society of America.

An exceptionally preserved Eocene shark and the rise of modern predator-prey interactions in the coral reef food web.

Science.gov (United States)

Fanti, Federico; Minelli, Daniela; Conte, Gabriele Larocca; Miyashita, Tetsuto

2016-01-01

Following extreme climatic warming events, Eocene Lagerstätten document aquatic and terrestrial vertebrate faunas surprisingly similar to modern counterparts. This transition in marine systems is best documented in the earliest teleost-dominated coral reef assemblage of Pesciara di Bolca, northern Italy, from near the end of the Eocene Climatic Optimum. Its rich fauna shows similarities with that of the modern Great Barrier Reef in niche exploitation by and morphological disparity among teleost primary consumers. However, such paleoecological understanding has not transcended trophic levels above primary consumers, particularly in carcharhiniform sharks. We report an exceptionally preserved fossil school shark (Galeorhinus cuvieri) from Pesciara di Bolca. In addition to the spectacular preservation of soft tissues, including brain, muscles, and claspers, this male juvenile shark has stomach contents clearly identifiable as a sphyraenid acanthomorph (barracuda). This association provides evidence that a predator-prey relationship between Galeorhinus and Sphyraena in the modern coral reefs has roots in the Eocene. A growth curve of the living species of Galeorhinus fitted to G. cuvieri suggests that all specimens of G. cuvieri from the lagoonal deposits of Bolca represent sexually and somatically immature juveniles. The modern trophic association between higher-degree consumers (Galeorhinus and Sphyraena) has a counterpart in the Eocene Bolca, just as Bolca and the Great Barrier Reef show parallels among teleost primary consumers. Given the age of Bolca, trophic networks among consumers observed in modern coral reefs arose by the exit from the Climatic Optimum. The biased representation of juveniles suggests that the Bolca Lagerstätte served as a nursery habitat for G. cuvieri. Ultraviolet photography may be useful in probing for exceptional soft tissue preservation before common acid preparation methods.

Sanctuaries for lake trout in the Great Lakes

Science.gov (United States)

Stanley, Jon G.; Eshenroder, Randy L.; Hartman, Wilbur L.

1987-01-01

Populations of lake trout, severely depleted in Lake Superior and virtually extirpated from the other Great Lakes because of sea lamprey predation and intense fishing, are now maintained by annual plantings of hatchery-reared fish in Lakes Michigan, Huron, and Ontario and parts of Lake Superior. The extensive coastal areas of the Great Lakes and proximity to large populations resulted in fishing pressure on planted lake trout heavy enough to push annual mortality associated with sport and commercial fisheries well above the critical level needed to reestablish self-sustaining stocks. The interagency, international program for rehabilitating lake trout includes controlling sea lamprey abundance, stocking hatchery-reared lake trout, managing the catch, and establishing sanctuaries where harvest is prohibited. Three lake trout sanctuaries have been established in Lake Michigan: the Fox Island Sanctuary of 121, 500 ha, in the Chippewa-Ottawa Treaty fishing zone in the northern region of the lake; the Milwaukee Reef Sanctuary of 160, 000 ha in midlake, in boundary waters of Michigan and Wisconsin; and Julian's Reef Sanctuary of 6, 500 ha, in Illinois waters. In northern Lake Huron, Drummond Island Sanctuary of 55, 000 ha is two thirds in Indian treaty-ceded waters in Michigan and one third in Ontario waters of Canada. A second sanctuary, Six Fathom Bank-Yankee Reef Sanctuary, in central Lake Huron contains 168, 000 ha. Sanctuary status for the Canadian areas remains to be approved by the Provincial government. In Lake Superior, sanctuaries protect the spawning grounds of Gull Island Shoal (70, 000 ha) and Devils Island Shoal (44, 000 ha) in Wisconsin's Apostle Island area. These seven sanctuaries, established by the several States and agreed upon by the States, Indian tribes, the U.S. Department of the Interior, and the Province of Ontario, contribute toward solving an interjurisdictional fishery problem.

Impacts of Artificial Reefs and Diving Tourism

Directory of Open Access Journals (Sweden)

Sandra Jakšić

2013-10-01

Full Text Available Coral reefs are currently endangered throughout the world. One of the main activities responsible for this is scuba-diving. Scuba-diving on coral reefs was not problematic in the begging, but due to popularization of the new sport, more and more tourists desired to participate in the activity. Mass tourism, direct contact of the tourists with the coral reefs and unprofessional behavior underwater has a negative effect on the coral reefs. The conflict between nature preservation and economy benefits related to scuba-diving tourism resulted in the creation of artificial reefs, used both to promote marine life and as tourists attractions, thereby taking the pressure off the natural coral reefs. Ships, vehicles and other large structures can be found on the coastal sea floor in North America, Australia, Japan and Europe. The concept of artificial reefs as a scuba-diving attraction was developed in Florida. The main goal was to promote aquaculture, with the popularization of scuba-diving attractions being a secondary effect. The aim of this paper is to determine the effects of artificial reefs on scuba-diving tourism, while taking into account the questionnaire carried out among 18 divers

Reef Visual Census (RVC) data.

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Provide data on frequency of occurrence , density abundance, and length frequency of reef fish throughout Florida reef tract from 1978 forward.

High Latitude Reefs: A Potential Refuge for Reef Builders

Science.gov (United States)

Amat, A.; Bates, N.

2003-04-01

Coral reefs globally show variable signs of deterioration or community structure changes due to a host of anthropogenic and natural factors. In these global scenarios, rates of calcification by reef builders such as Scleractinian corals are predicted to significantly decline in the future due to the increase in atmospheric CO_2. When considering the response of reefs to the present climate change, temperature effects should also be taken into account. Here, we investigate the simultaneous impact of temperature and CO_2 on the high-latitude Bermuda coral reef system (32^oN, 64^oE)through a series of in vitro experiments at different CO_2 levels and seasonally different summer (27^oC) and winter (20^oC) temperature conditions. Four species of Scleractinian corals (Porites astreoides, Diploria labyrinthiformis, Madracis mirabilis and decactis) were acclimated for three months at: 20^oC and 27^oC (both with CO_2 levels at 400 ppm (control) and 700 ppm). Growth was assessed by buoyant weight techniques during the acclimation period. Photosynthesis, respiration and calcification were measured at the end of this period using respirometric chambers. A reproduction experiment was also undertaken under 27^oC. Photosynthesis mainly remains constant or increases under high CO_2 conditions. The results of the integrated calcification measurements confirm the hypothesis that an increase in CO_2 induces a decrease in calcification. However an increase in photosynthesis can be observed when CO_2 is unfavorable for calcification suggesting that a biological control of calcification through photosynthesis could prevent a drop in the calcification potential. Buoyant weight results indicate that the CO_2 impact could be less detrimental under lower temperature. This result will be compared with the instantaneous calcification measurements in the chambers and some in situ coral growth assessments in winter and summer conditions. The consequences for the response of marginal reefs

The Açu Reef morphology, distribution, and inter reef sedimentation on the outer shelf of the NE Brazil equatorial margin

Science.gov (United States)

do Nascimento Silva, Luzia Liniane; Gomes, Moab Praxedes; Vital, Helenice

2018-05-01

Submerged reefs, referred to as the Açu Reefs, have been newly observed on both sides of the Açu Incised Valley on the northeastern equatorial Brazilian outer shelf. This study aims to understand the roles of shelf physiography, its antecedent morphologies, and its inter reef sedimentation on the different development stages of the biogenic reef during last deglacial sea-level rise. The data sets consist of side-scan sonar imagery, one sparker seismic profile, 76 sediment samples, and underwater photography. Seven backscatter patterns (P1 to P7) were identified and associated with eleven sedimentary carbonate and siliciclastic facies. The inherited relief, the mouth of the paleo incised valley, and the interreef sediment distribution play major controls on the deglacial reef evolution. The reefs occur in a depth-limited 25-55 m water depth range and in a 6 km wide narrow zone of the outer shelf. The reefs crop out in a surface area over 100 km2 and occur as a series of NW-SE preferentially orientated ridges composed of three parallel ridge sets at 45, 35, and 25 m of water depth. The reefs form a series of individual, roughly linear ridges, tens of km in length, acting as barriers in addition to scattered reef mounds or knolls, averaging 4 m in height and grouped in small patches and aggregates. The reefs, currently limited at the transition between the photic and mesophotic zones, are thinly covered by red algae and scattered coral heads and sponges. Taking into account the established sea-level curves from the equatorial Brazilian northeastern shelf / Rochas Atoll and Barbados, the shelf physiography, and the shallow bedrock, the optimal conditions for reef development had to occur during a time interval (11-9 kyr BP) characterized by a slowdown of the outer shelf flooding, immediately following Meltwater Pulse-1B. This 2 kyr short interval provided unique conditions for remarkable reef backstepping into distinct parallel ridge sets. Furthermore, the Açu Reefs

National Coral Reef Monitoring Program: Assessing and Monitoring Cryptic Reef Diversity of Colonizing Marine Invertebrates using Autonomous Reef Monitoring Structure (ARMS) Deployed at Coral Reef Sites across the Marianas Archipelago from 2011 to 2014

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Autonomous Reef Monitoring Structures (ARMS) are used to assess and monitor cryptic reef diversity of colonizing marine invertebrates in the Hawaiian and Mariana...

National Coral Reef Monitoring Program: Assessing and Monitoring Cryptic Reef Diversity of Colonizing Marine Invertebrates using Autonomous Reef Monitoring Structure (ARMS) Deployed at Coral Reef Sites across the Hawaiian Archipelago from 2010 to 2016

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Autonomous Reef Monitoring Structures (ARMS) are used to assess and monitor cryptic reef diversity of colonizing marine invertebrates in the Hawaiian and Mariana...

Social Resilience and Commercial Fishers' Responses to Management Changes in the Great Barrier Reef Marine Park

Directory of Open Access Journals (Sweden)

Stephen G. Sutton

2012-09-01

Full Text Available Understanding how social resilience influences resource users' responses to policy change is important for ensuring the sustainability of social-ecological systems and resource-dependent communities. We use the conceptualization and operationalization of social resilience proposed by Marshall and Marshall (2007 to investigate how resilience level influenced commercial fishers' perceptions about and adaptation to the 2004 rezoning of the Great Barrier Reef Marine Park. We conducted face-to-face interviews with 114 commercial and charter fishers to measure their social resilience level and their responses and adaptation strategies to the 2004 zoning plan. Fishers with higher resilience were more likely to believe that the zoning plan was necessary, more likely to be supportive of the plan, and more likely to have adapted their fishing business and fishing activity to the plan than were fishers with lower social resilience. High-resilience fishers were also less likely to perceive negative impacts of the plan on their fishing business, less likely to have negative attitudes toward the consultation process used to develop and implement the plan, and less likely to have applied for financial compensation under the structural adjustment program. Results confirm the utility of the social resilience construct for identifying fishers who are likely to be vulnerable to changes, and those who are struggling to cope with change events. We conclude that managing for social resilience in the GBR would aid in the design and implementation of policies that minimize the impacts on resource users and lead to more inclusive and sustainable management, but that further research is necessary to better understand social resilience, how it can be fostered and sustained, and how it can be effectively incorporated into management.

The Ecological Role of Sharks on Coral Reefs.

Science.gov (United States)

Roff, George; Doropoulos, Christopher; Rogers, Alice; Bozec, Yves-Marie; Krueck, Nils C; Aurellado, Eleanor; Priest, Mark; Birrell, Chico; Mumby, Peter J

2016-05-01

Sharks are considered the apex predator of coral reefs, but the consequences of their global depletion are uncertain. Here we explore the ecological roles of sharks on coral reefs and, conversely, the importance of reefs for sharks. We find that most reef-associated shark species do not act as apex predators but instead function as mesopredators along with a diverse group of reef fish. While sharks perform important direct and indirect ecological roles, the evidence to support hypothesised shark-driven trophic cascades that benefit corals is weak and equivocal. Coral reefs provide some functional benefits to sharks, but sharks do not appear to favour healthier reef environments. Restoring populations of sharks is important and can yet deliver ecological surprise. Copyright © 2016 Elsevier Ltd. All rights reserved.

Coral settlement on a highly disturbed equatorial reef system.

Science.gov (United States)

Bauman, Andrew G; Guest, James R; Dunshea, Glenn; Low, Jeffery; Todd, Peter A; Steinberg, Peter D

2015-01-01

Processes occurring early in the life stages of corals can greatly influence the demography of coral populations, and successful settlement of coral larvae that leads to recruitment is a critical life history stage for coral reef ecosystems. Although corals in Singapore persist in one the world's most anthropogenically impacted reef systems, our understanding of the role of coral settlement in the persistence of coral communities in Singapore remains limited. Spatial and temporal patterns of coral settlement were examined at 7 sites in the southern islands of Singapore, using settlement tiles deployed and collected every 3 months from 2011 to 2013. Settlement occurred year round, but varied significantly across time and space. Annual coral settlement was low (~54.72 spat m(-2) yr(-1)) relative to other equatorial regions, but there was evidence of temporal variation in settlement rates. Peak settlement occurred between March-May and September-November, coinciding with annual coral spawning periods (March-April and October), while the lowest settlement occurred from December-February during the northeast monsoon. A period of high settlement was also observed between June and August in the first year (2011/12), possibly due to some species spawning outside predicted spawning periods, larvae settling from other locations or extended larval settlement competency periods. Settlement rates varied significantly among sites, but spatial variation was relatively consistent between years, suggesting the strong effects of local coral assemblages or environmental conditions. Pocilloporidae were the most abundant coral spat (83.6%), while Poritidae comprised only 6% of the spat, and Acroporidae coral spat. These results indicate that current settlement patterns are reinforcing the local adult assemblage structure ('others'; i.e. sediment-tolerant coral taxa) in Singapore, but that the replenishment capacity of Singapore's reefs appears relatively constrained, which could lead

High natural gene expression variation in the reef-building coral Acropora millepora: potential for acclimative and adaptive plasticity.

Science.gov (United States)

Granados-Cifuentes, Camila; Bellantuono, Anthony J; Ridgway, Tyrone; Hoegh-Guldberg, Ove; Rodriguez-Lanetty, Mauricio

2013-04-08

Ecosystems worldwide are suffering the consequences of anthropogenic impact. The diverse ecosystem of coral reefs, for example, are globally threatened by increases in sea surface temperatures due to global warming. Studies to date have focused on determining genetic diversity, the sequence variability of genes in a species, as a proxy to estimate and predict the potential adaptive response of coral populations to environmental changes linked to climate changes. However, the examination of natural gene expression variation has received less attention. This variation has been implicated as an important factor in evolutionary processes, upon which natural selection can act. We acclimatized coral nubbins from six colonies of the reef-building coral Acropora millepora to a common garden in Heron Island (Great Barrier Reef, GBR) for a period of four weeks to remove any site-specific environmental effects on the physiology of the coral nubbins. By using a cDNA microarray platform, we detected a high level of gene expression variation, with 17% (488) of the unigenes differentially expressed across coral nubbins of the six colonies (jsFDR-corrected, p natural variation between reef corals when assessing experimental gene expression differences. The high transcriptional variation detected in this study is interpreted and discussed within the context of adaptive potential and phenotypic plasticity of reef corals. Whether this variation will allow coral reefs to survive to current challenges remains unknown.

Coral Reefs at the Northernmost Tip of Borneo: An Assessment of Scleractinian Species Richness Patterns and Benthic Reef Assemblages.

Directory of Open Access Journals (Sweden)

Zarinah Waheed

Full Text Available The coral reefs at the northernmost tip of Sabah, Borneo will be established under a marine protected area: the Tun Mustapha Park (TMP by the end of 2015. This area is a passage where the Sulu Sea meets the South China Sea and it is situated at the border of the area of maximum marine biodiversity, the Coral Triangle. The TMP includes fringing and patch reefs established on a relatively shallow sea floor. Surveys were carried out to examine features of the coral reefs in terms of scleractinian species richness, and benthic reef assemblages following the Reef Check substrate categories, with emphasis on hard coral cover. Variation in scleractinian diversity was based on the species composition of coral families Fungiidae (n = 39, Agariciidae (n = 30 and Euphylliidae (n = 15. The number of coral species was highest at reefs with a larger depth gradient i.e. at the periphery of the study area and in the deep South Banggi Channel. Average live hard coral cover across the sites was 49%. Only 7% of the examined reefs had > 75% hard coral cover, while the majority of the reef sites were rated fair (51% and good (38%. Sites with low coral cover and high rubble fragments are evidence of blast fishing, although the observed damage appeared old. Depth was a dominant factor in influencing the coral species composition and benthic reef communities in the TMP. Besides filling in the information gaps regarding species richness and benthic cover for reef areas that were previously without any data, the results of this study together with information that is already available on the coral reefs of TMP will be used to make informed decisions on zoning plans for conservation priorities in the proposed park.

Coral Reefs at the Northernmost Tip of Borneo: An Assessment of Scleractinian Species Richness Patterns and Benthic Reef Assemblages.

Science.gov (United States)

Waheed, Zarinah; van Mil, Harald G J; Syed Hussein, Muhammad Ali; Jumin, Robecca; Golam Ahad, Bobita; Hoeksema, Bert W

2015-01-01

The coral reefs at the northernmost tip of Sabah, Borneo will be established under a marine protected area: the Tun Mustapha Park (TMP) by the end of 2015. This area is a passage where the Sulu Sea meets the South China Sea and it is situated at the border of the area of maximum marine biodiversity, the Coral Triangle. The TMP includes fringing and patch reefs established on a relatively shallow sea floor. Surveys were carried out to examine features of the coral reefs in terms of scleractinian species richness, and benthic reef assemblages following the Reef Check substrate categories, with emphasis on hard coral cover. Variation in scleractinian diversity was based on the species composition of coral families Fungiidae (n = 39), Agariciidae (n = 30) and Euphylliidae (n = 15). The number of coral species was highest at reefs with a larger depth gradient i.e. at the periphery of the study area and in the deep South Banggi Channel. Average live hard coral cover across the sites was 49%. Only 7% of the examined reefs had > 75% hard coral cover, while the majority of the reef sites were rated fair (51%) and good (38%). Sites with low coral cover and high rubble fragments are evidence of blast fishing, although the observed damage appeared old. Depth was a dominant factor in influencing the coral species composition and benthic reef communities in the TMP. Besides filling in the information gaps regarding species richness and benthic cover for reef areas that were previously without any data, the results of this study together with information that is already available on the coral reefs of TMP will be used to make informed decisions on zoning plans for conservation priorities in the proposed park.

Coral Reefs at the Northernmost Tip of Borneo: An Assessment of Scleractinian Species Richness Patterns and Benthic Reef Assemblages

Science.gov (United States)

Waheed, Zarinah; van Mil, Harald G. J.; Syed Hussein, Muhammad Ali; Jumin, Robecca; Golam Ahad, Bobita; Hoeksema, Bert W.

2015-01-01

The coral reefs at the northernmost tip of Sabah, Borneo will be established under a marine protected area: the Tun Mustapha Park (TMP) by the end of 2015. This area is a passage where the Sulu Sea meets the South China Sea and it is situated at the border of the area of maximum marine biodiversity, the Coral Triangle. The TMP includes fringing and patch reefs established on a relatively shallow sea floor. Surveys were carried out to examine features of the coral reefs in terms of scleractinian species richness, and benthic reef assemblages following the Reef Check substrate categories, with emphasis on hard coral cover. Variation in scleractinian diversity was based on the species composition of coral families Fungiidae (n = 39), Agariciidae (n = 30) and Euphylliidae (n = 15). The number of coral species was highest at reefs with a larger depth gradient i.e. at the periphery of the study area and in the deep South Banggi Channel. Average live hard coral cover across the sites was 49%. Only 7% of the examined reefs had > 75% hard coral cover, while the majority of the reef sites were rated fair (51%) and good (38%). Sites with low coral cover and high rubble fragments are evidence of blast fishing, although the observed damage appeared old. Depth was a dominant factor in influencing the coral species composition and benthic reef communities in the TMP. Besides filling in the information gaps regarding species richness and benthic cover for reef areas that were previously without any data, the results of this study together with information that is already available on the coral reefs of TMP will be used to make informed decisions on zoning plans for conservation priorities in the proposed park. PMID:26719987

The role of turtles as coral reef macroherbivores

KAUST Repository

Goatley, Christopher H. R.

2012-06-29

Herbivory is widely accepted as a vital function on coral reefs. To date, the majority of studies examining herbivory in coral reef environments have focused on the roles of fishes and/or urchins, with relatively few studies considering the potential role of macroherbivores in reef processes. Here, we introduce evidence that highlights the potential role of marine turtles as herbivores on coral reefs. While conducting experimental habitat manipulations to assess the roles of herbivorous reef fishes we observed green turtles (Chelonia mydas) and hawksbill turtles (Eretmochelys imbricata) showing responses that were remarkably similar to those of herbivorous fishes. Reducing the sediment load of the epilithic algal matrix on a coral reef resulted in a forty-fold increase in grazing by green turtles. Hawksbill turtles were also observed to browse transplanted thalli of the macroalga Sargassum swartzii in a coral reef environment. These responses not only show strong parallels to herbivorous reef fishes, but also highlight that marine turtles actively, and intentionally, remove algae from coral reefs. When considering the size and potential historical abundance of marine turtles we suggest that these potentially valuable herbivores may have been lost from many coral reefs before their true importance was understood. © 2012 Goatley et al.

The role of turtles as coral reef macroherbivores

KAUST Repository

Goatley, Christopher H. R.; Hoey, Andrew; Bellwood, David R.

2012-01-01

Herbivory is widely accepted as a vital function on coral reefs. To date, the majority of studies examining herbivory in coral reef environments have focused on the roles of fishes and/or urchins, with relatively few studies considering the potential role of macroherbivores in reef processes. Here, we introduce evidence that highlights the potential role of marine turtles as herbivores on coral reefs. While conducting experimental habitat manipulations to assess the roles of herbivorous reef fishes we observed green turtles (Chelonia mydas) and hawksbill turtles (Eretmochelys imbricata) showing responses that were remarkably similar to those of herbivorous fishes. Reducing the sediment load of the epilithic algal matrix on a coral reef resulted in a forty-fold increase in grazing by green turtles. Hawksbill turtles were also observed to browse transplanted thalli of the macroalga Sargassum swartzii in a coral reef environment. These responses not only show strong parallels to herbivorous reef fishes, but also highlight that marine turtles actively, and intentionally, remove algae from coral reefs. When considering the size and potential historical abundance of marine turtles we suggest that these potentially valuable herbivores may have been lost from many coral reefs before their true importance was understood. © 2012 Goatley et al.

The role of turtles as coral reef macroherbivores.

Directory of Open Access Journals (Sweden)

Christopher H R Goatley

Full Text Available Herbivory is widely accepted as a vital function on coral reefs. To date, the majority of studies examining herbivory in coral reef environments have focused on the roles of fishes and/or urchins, with relatively few studies considering the potential role of macroherbivores in reef processes. Here, we introduce evidence that highlights the potential role of marine turtles as herbivores on coral reefs. While conducting experimental habitat manipulations to assess the roles of herbivorous reef fishes we observed green turtles (Chelonia mydas and hawksbill turtles (Eretmochelys imbricata showing responses that were remarkably similar to those of herbivorous fishes. Reducing the sediment load of the epilithic algal matrix on a coral reef resulted in a forty-fold increase in grazing by green turtles. Hawksbill turtles were also observed to browse transplanted thalli of the macroalga Sargassum swartzii in a coral reef environment. These responses not only show strong parallels to herbivorous reef fishes, but also highlight that marine turtles actively, and intentionally, remove algae from coral reefs. When considering the size and potential historical abundance of marine turtles we suggest that these potentially valuable herbivores may have been lost from many coral reefs before their true importance was understood.

A Global Estimate of the Number of Coral Reef Fishers.

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Louise S L Teh

Full Text Available Overfishing threatens coral reefs worldwide, yet there is no reliable estimate on the number of reef fishers globally. We address this data gap by quantifying the number of reef fishers on a global scale, using two approaches - the first estimates reef fishers as a proportion of the total number of marine fishers in a country, based on the ratio of reef-related to total marine fish landed values. The second estimates reef fishers as a function of coral reef area, rural coastal population, and fishing pressure. In total, we find that there are 6 million reef fishers in 99 reef countries and territories worldwide, of which at least 25% are reef gleaners. Our estimates are an improvement over most existing fisher population statistics, which tend to omit accounting for gleaners and reef fishers. Our results suggest that slightly over a quarter of the world's small-scale fishers fish on coral reefs, and half of all coral reef fishers are in Southeast Asia. Coral reefs evidently support the socio-economic well-being of numerous coastal communities. By quantifying the number of people who are employed as reef fishers, we provide decision-makers with an important input into planning for sustainable coral reef fisheries at the appropriate scale.

A Global Estimate of the Number of Coral Reef Fishers.

Science.gov (United States)

Teh, Louise S L; Teh, Lydia C L; Sumaila, U Rashid

2013-01-01

Overfishing threatens coral reefs worldwide, yet there is no reliable estimate on the number of reef fishers globally. We address this data gap by quantifying the number of reef fishers on a global scale, using two approaches - the first estimates reef fishers as a proportion of the total number of marine fishers in a country, based on the ratio of reef-related to total marine fish landed values. The second estimates reef fishers as a function of coral reef area, rural coastal population, and fishing pressure. In total, we find that there are 6 million reef fishers in 99 reef countries and territories worldwide, of which at least 25% are reef gleaners. Our estimates are an improvement over most existing fisher population statistics, which tend to omit accounting for gleaners and reef fishers. Our results suggest that slightly over a quarter of the world's small-scale fishers fish on coral reefs, and half of all coral reef fishers are in Southeast Asia. Coral reefs evidently support the socio-economic well-being of numerous coastal communities. By quantifying the number of people who are employed as reef fishers, we provide decision-makers with an important input into planning for sustainable coral reef fisheries at the appropriate scale.

The wicked problem of China's disappearing coral reefs.

Science.gov (United States)

Hughes, Terry P; Huang, Hui; Young, Matthew A L

2013-04-01

We examined the development of coral reef science and the policies, institutions, and governance frameworks for management of coral reefs in China in order to highlight the wicked problem of preserving reefs while simultaneously promoting human development and nation building. China and other sovereign states in the region are experiencing unprecedented economic expansion, rapid population growth, mass migration, widespread coastal development, and loss of habitat. We analyzed a large, fragmented literature on the condition of coral reefs in China and the disputed territories of the South China Sea. We found that coral abundance has declined by at least 80% over the past 30 years on coastal fringing reefs along the Chinese mainland and adjoining Hainan Island. On offshore atolls and archipelagos claimed by 6 countries in the South China Sea, coral cover has declined from an average of >60% to around 20% within the past 10-15 years. Climate change has affected these reefs far less than coastal development, pollution, overfishing, and destructive fishing practices. Ironically, these widespread declines in the condition of reefs are unfolding as China's research and reef-management capacity are rapidly expanding. Before the loss of corals becomes irreversible, governance of China's coastal reefs could be improved by increasing public awareness of declining ecosystem services, by providing financial support for training of reef scientists and managers, by improving monitoring of coral reef dynamics and condition to better inform policy development, and by enforcing existing regulations that could protect coral reefs. In the South China Sea, changes in policy and legal frameworks, refinement of governance structures, and cooperation among neighboring countries are urgently needed to develop cooperative management of contested offshore reefs. © 2012 Society for Conservation Biology.

Coral reef bleaching: ecological perspectives

Science.gov (United States)

Glynn, P. W.

1993-03-01

Coral reef bleaching, the whitening of diverse invertebrate taxa, results from the loss of symbiotic zooxanthellae and/or a reduction in photosynthetic pigment concentrations in zooxanthellae residing within the gastrodermal tissues of host animals. Of particular concern are the consequences of bleaching of large numbers of reef-building scleractinian corals and hydrocorals. Published records of coral reef bleaching events from 1870 to the present suggest that the frequency (60 major events from 1979 to 1990), scale (co-occurrence in many coral reef regions and often over the bathymetric depth range of corals) and severity (>95% mortality in some areas) of recent bleaching disturbances are unprecedented in the scientific literature. The causes of small scale, isolated bleaching events can often be explained by particular stressors (e.g., temperature, salinity, light, sedimentation, aerial exposure and pollutants), but attempts to explain large scale bleaching events in terms of possible global change (e.g., greenhouse warming, increased UV radiation flux, deteriorating ecosystem health, or some combination of the above) have not been convincing. Attempts to relate the severity and extent of large scale coral reef bleaching events to particular causes have been hampered by a lack of (a) standardized methods to assess bleaching and (b) continuous, long-term data bases of environmental conditions over the periods of interest. An effort must be made to understand the impact of bleaching on the remainder of the reef community and the long-term effects on competition, predation, symbioses, bioerosion and substrate condition, all factors that can influence coral recruitment and reef recovery. If projected rates of sea warming are realized by mid to late AD 2000, i.e. a 2°C increase in high latitude coral seas, the upper thermal tolerance limits of many reef-building corals could be exceeded. Present evidence suggests that many corals would be unable to adapt

Artificial reefs: “Attraction versus Production”

Directory of Open Access Journals (Sweden)

Eduardo Barros Fagundes Netto

2011-04-01

Full Text Available The production of fish is the most common reason for the construction and installation of an artificial reef. More recently, environmental concerns and conservation of biological resources have been instrumental to the formulation of new goals of the research. One of the issues to be resolved is the biological function of “attraction vs. production” as a result of the use of artificial reefs. The uncertainty as to the answer to the question whether the artificial reefs will or not benefit the development of fish stocks could be solved if the artificial reefs would be managed as marine protected areas.

Coral mortality in reefs: The cause and effect; A central concern for reef monitoring

Digital Repository Service at National Institute of Oceanography (India)

Raghukumar, C.

stream_size 4 stream_content_type text/plain stream_name Region_Workshop_Conserv_Sustain_Mgmt_Coral_Reefs_1997_C83.pdf.txt stream_source_info Region_Workshop_Conserv_Sustain_Mgmt_Coral_Reefs_1997_C83.pdf.txt Content-Encoding ISO-8859...

Satellite remote sensing reveals a positive impact of living oyster reefs on microalgal biofilm development

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C. Echappé

2018-02-01

Full Text Available Satellite remote sensing (RS is routinely used for the large-scale monitoring of microphytobenthos (MPB biomass in intertidal mudflats and has greatly improved our knowledge of MPB spatio-temporal variability and its potential drivers. Processes operating on smaller scales however, such as the impact of benthic macrofauna on MPB development, to date remain underinvestigated. In this study, we analysed the influence of wild Crassostrea gigas oyster reefs on MPB biofilm development using multispectral RS. A 30-year time series (1985–2015 combining high-resolution (30 m Landsat and SPOT data was built in order to explore the relationship between C. gigas reefs and MPB spatial distribution and seasonal dynamics, using the normalized difference vegetation index (NDVI. Emphasis was placed on the analysis of a before–after control-impact (BACI experiment designed to assess the effect of oyster killing on the surrounding MPB biofilms. Our RS data reveal that the presence of oyster reefs positively affects MPB biofilm development. Analysis of the historical time series first showed the presence of persistent, highly concentrated MPB patches around oyster reefs. This observation was supported by the BACI experiment which showed that killing the oysters (while leaving the physical reef structure, i.e. oyster shells, intact negatively affected both MPB biofilm biomass and spatial stability around the reef. As such, our results are consistent with the hypothesis of nutrient input as an explanation for the MPB growth-promoting effect of oysters, whereby organic and inorganic matter released through oyster excretion and biodeposition stimulates MPB biomass accumulation. MPB also showed marked seasonal variations in biomass and patch shape, size and degree of aggregation around the oyster reefs. Seasonal variations in biomass, with higher NDVI during spring and autumn, were consistent with those observed on broader scales in other European mudflats. Our

Satellite remote sensing reveals a positive impact of living oyster reefs on microalgal biofilm development

Science.gov (United States)

Echappé, Caroline; Gernez, Pierre; Méléder, Vona; Jesus, Bruno; Cognie, Bruno; Decottignies, Priscilla; Sabbe, Koen; Barillé, Laurent

2018-02-01

Satellite remote sensing (RS) is routinely used for the large-scale monitoring of microphytobenthos (MPB) biomass in intertidal mudflats and has greatly improved our knowledge of MPB spatio-temporal variability and its potential drivers. Processes operating on smaller scales however, such as the impact of benthic macrofauna on MPB development, to date remain underinvestigated. In this study, we analysed the influence of wild Crassostrea gigas oyster reefs on MPB biofilm development using multispectral RS. A 30-year time series (1985-2015) combining high-resolution (30 m) Landsat and SPOT data was built in order to explore the relationship between C. gigas reefs and MPB spatial distribution and seasonal dynamics, using the normalized difference vegetation index (NDVI). Emphasis was placed on the analysis of a before-after control-impact (BACI) experiment designed to assess the effect of oyster killing on the surrounding MPB biofilms. Our RS data reveal that the presence of oyster reefs positively affects MPB biofilm development. Analysis of the historical time series first showed the presence of persistent, highly concentrated MPB patches around oyster reefs. This observation was supported by the BACI experiment which showed that killing the oysters (while leaving the physical reef structure, i.e. oyster shells, intact) negatively affected both MPB biofilm biomass and spatial stability around the reef. As such, our results are consistent with the hypothesis of nutrient input as an explanation for the MPB growth-promoting effect of oysters, whereby organic and inorganic matter released through oyster excretion and biodeposition stimulates MPB biomass accumulation. MPB also showed marked seasonal variations in biomass and patch shape, size and degree of aggregation around the oyster reefs. Seasonal variations in biomass, with higher NDVI during spring and autumn, were consistent with those observed on broader scales in other European mudflats. Our study provides the

Wave Dissipation on Low- to Super-Energy Coral Reefs

Science.gov (United States)

Harris, D. L.

2016-02-01

Coral reefs are valuable, complex and bio-diverse ecosystems and are also known to be one of the most effective barriers to swell events in coastal environments. Previous research has found coral reefs to be remarkably efficient in removing most of the wave energy during the initial breaking and transformation on the reef flats. The rate of dissipation is so rapid that coral reefs have been referred to as rougher than any known coastal barrier. The dissipation of wave energy across reef flats is crucial in maintaining the relatively low-energy conditions in the back reef and lagoonal environments providing vital protection to adjacent beach or coastal regions from cyclone and storm events. A shift in the regulation of wave energy by reef flats could have catastrophic consequences ecologically, socially, and economically. This study examined the dissipation of wave energy during two swell events in Tahiti and Moorea, French Polyesia. Field sites were chosen in varying degrees of exposure and geomorphology from low-energy protected sites (Tiahura, Moorea) to super-energy sites (Teahupo'o, Tahiti). Waves were measured during two moderate to large swell events in cross reef transects using short-term high-resolution pressure transducers. Wave conditions were found to be similar in all back reef locations despite the very different wave exposure at each reef site. However, wave conditions on the reef flats were different and mirrored the variation in wave exposure with depth over the reef flat the primary regulator of reef flat wave height. These results indicate that coral reef flats evolve morphodynamically with the wave climate, which creates coral reef geomorphologies capable of dissipating wave energy that results in similar back reef wave conditions regardless of the offshore wave climate.

Warm-water coral reefs and climate change.

Science.gov (United States)

Spalding, Mark D; Brown, Barbara E

2015-11-13

Coral reefs are highly dynamic ecosystems that are regularly exposed to natural perturbations. Human activities have increased the range, intensity, and frequency of disturbance to reefs. Threats such as overfishing and pollution are being compounded by climate change, notably warming and ocean acidification. Elevated temperatures are driving increasingly frequent bleaching events that can lead to the loss of both coral cover and reef structural complexity. There remains considerable variability in the distribution of threats and in the ability of reefs to survive or recover from such disturbances. Without significant emissions reductions, however, the future of coral reefs is increasingly bleak. Copyright © 2015, American Association for the Advancement of Science.

Satellite-Derived Photic Depth on the Great Barrier Reef: Spatio-Temporal Patterns of Water Clarity

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Scarla Weeks

2012-11-01

Full Text Available Detecting changes to the transparency of the water column is critical for understanding the responses of marine organisms, such as corals, to light availability. Long-term patterns in water transparency determine geographical and depth distributions, while acute reductions cause short-term stress, potentially mortality and may increase the organisms’ vulnerability to other environmental stressors. Here, we investigated the optimal, operational algorithm for light attenuation through the water column across the scale of the Great Barrier Reef (GBR, Australia. We implemented and tested a quasi-analytical algorithm to determine the photic depth in GBR waters and matched regional Secchi depth (ZSD data to MODIS-Aqua (2002–2010 and SeaWiFS (1997–2010 satellite data. The results of the in situ ZSD/satellite data matchup showed a simple bias offset between the in situ and satellite retrievals. Using a Type II linear regression of log-transformed satellite and in situ data, we estimated ZSD and implemented the validated ZSD algorithm to generate a decadal satellite time series (2002–2012 for the GBR. Water clarity varied significantly in space and time. Seasonal effects were distinct, with lower values during the austral summer, most likely due to river runoff and increased vertical mixing, and a decline in water clarity between 2008–2012, reflecting a prevailing La Niña weather pattern. The decline in water clarity was most pronounced in the inshore area, where a significant decrease in mean inner shelf ZSD of 2.1 m (from 8.3 m to 6.2 m occurred over the decade. Empirical Orthogonal Function Analysis determined the dominance of Mode 1 (51.3%, with the greatest variation in water clarity along the mid-shelf, reflecting the strong influence of oceanic intrusions on the spatio-temporal patterns of water clarity. The newly developed photic depth product has many potential applications for the GBR from water quality monitoring to analyses of

Effects of reduced water quality on coral reefs in and out of no-take marine reserves.

Science.gov (United States)

Wenger, Amelia S; Williamson, David H; da Silva, Eduardo T; Ceccarelli, Daniela M; Browne, Nicola K; Petus, Caroline; Devlin, Michelle J

2016-02-01

Near-shore marine environments are increasingly subjected to reduced water quality, and their ability to withstand it is critical to their persistence. The potential role marine reserves may play in mitigating the effects of reduced water quality has received little attention. We investigated the spatial and temporal variability in live coral and macro-algal cover and water quality during moderate and major flooding events of the Fitzroy River within the Keppel Bay region of the Great Barrier Reef Marine Park from 2007 to 2013. We used 7 years of remote sensing data on water quality and data from long-term monitoring of coral reefs to quantify exposure of coral reefs to flood plumes. We used a distance linear model to partition the contribution of abiotic and biotic factors, including zoning, as drivers of the observed changes in coral and macro-algae cover. Moderate flood plumes from 2007 to 2009 did not affect coral cover on reefs in the Keppel Islands, suggesting the reef has intrinsic resistance against short-term exposure to reduced water quality. However, from 2009 to 2013, live coral cover declined by ∼ 50% following several weeks of exposure to turbid, low salinity water from major flood plume events in 2011 and subsequent moderate events in 2012 and 2013. Although the flooding events in 2012 and 2013 were smaller than the flooding events between 2007 to 2009, the ability of the reefs to withstand these moderate floods was lost, as evidenced by a ∼ 20% decline in coral cover between 2011 to 2013. Although zoning (no-take reserve or fished) was identified a significant driver of coral cover, we recorded consistently lower coral cover on reserve reefs than on fished reefs throughout the study period and significantly lower cover in 2011. Our findings suggest that even reefs with an inherent resistance to reduced water quality are not able to withstand repeated disturbance events. The limitations of reserves in mitigating the effects of reduced water

Fecal bacterial communities of wild-captured and stranded green turtles (Chelonia mydas) on the Great Barrier Reef.

Science.gov (United States)

Ahasan, Md Shamim; Waltzek, Thomas B; Huerlimann, Roger; Ariel, Ellen

2017-12-01

Green turtles (Chelonia mydas) are endangered marine herbivores that break down food particles, primarily sea grasses, through microbial fermentation. However, the microbial community and its role in health and disease is still largely unexplored. In this study, we investigated and compared the fecal bacterial communities of eight wild-captured green turtles to four stranded turtles in the central Great Barrier Reef regions that include Bowen and Townsville. We used high-throughput sequencing analysis targeting the hypervariable V1-V3 regions of the bacterial 16S rRNA gene. At the phylum level, Firmicutes predominated among wild-captured green turtles, followed by Bacteroidetes and Proteobacteria. In contrast, Proteobacteria (Gammaproteobacteria) was the most significantly dominant phylum among all stranded turtles, followed by Bacteroidetes and Firmicutes. In addition, Fusobacteria was also significantly abundant in stranded turtles. No significant differences were found between the wild-captured turtles in Bowen and Townsville. At the family level, the core bacterial community consisted of 25 families that were identified in both the wild-captured and stranded green turtles, while two unique sets of 14 families each were only found in stranded or wild-captured turtles. The predominance of Bacteroides in all groups indicates the importance of these bacteria in turtle gut health. In terms of bacterial diversity and richness, wild-captured green turtles showed a higher bacterial diversity and richness compared with stranded turtles. The marked differences in the bacterial communities between wild-captured and stranded turtles suggest the possible dysbiosis in stranded turtles in addition to potential causal agents. © FEMS 2017. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

Epilithic Cyanobacterial Communities of a Marine Tropical Beach Rock (Heron Island, Great Barrier Reef): Diversity and Diazotrophy▿

Science.gov (United States)

Díez, Beatriz; Bauer, Karolina; Bergman, Birgitta

2007-01-01

The diversity and nitrogenase activity of epilithic marine microbes in a Holocene beach rock (Heron Island, Great Barrier Reef, Australia) with a proposed biological calcification “microbialite” origin were examined. Partial 16S rRNA gene sequences from the dominant mat (a coherent and layered pink-pigmented community spread over the beach rock) and biofilms (nonstratified, differently pigmented microbial communities of small shallow depressions) were retrieved using denaturing gradient gel electrophoresis (DGGE), and a clone library was retrieved from the dominant mat. The 16S rRNA gene sequences and morphological analyses revealed heterogeneity in the cyanobacterial distribution patterns. The nonheterocystous filamentous genus Blennothrix sp., phylogenetically related to Lyngbya, dominated the mat together with unidentified nonheterocystous filaments of members of the Pseudanabaenaceae and the unicellular genus Chroococcidiopsis. The dominance and three-dimensional intertwined distribution of these organisms were confirmed by nonintrusive scanning microscopy. In contrast, the less pronounced biofilms were dominated by the heterocystous cyanobacterial genus Calothrix, two unicellular Entophysalis morphotypes, Lyngbya spp., and members of the Pseudanabaenaceae family. Cytophaga-Flavobacterium-Bacteroides and Alphaproteobacteria phylotypes were also retrieved from the beach rock. The microbial diversity of the dominant mat was accompanied by high nocturnal nitrogenase activities (as determined by in situ acetylene reduction assays). A new DGGE nifH gene optimization approach for cyanobacterial nitrogen fixers showed that the sequences retrieved from the dominant mat were related to nonheterocystous uncultured cyanobacterial phylotypes, only distantly related to sequences of nitrogen-fixing cultured cyanobacteria. These data stress the occurrence and importance of nonheterocystous epilithic cyanobacteria, and it is hypothesized that such epilithic cyanobacteria

Prevalence of virus-like particles within a staghorn scleractinian coral ( Acropora muricata) from the Great Barrier Reef

Science.gov (United States)

Patten, N. L.; Harrison, P. L.; Mitchell, J. G.

2008-09-01

Transmission electron microscopy (TEM) was used to determine whether Acropora muricata coral colonies from the Great Barrier Reef (GBR), Australia, harboured virus-like particles (VLPs). VLPs were present in all coral colonies sampled at Heron Island (southern GBR) and in tagged coral colonies sampled in at least two of the three sampling periods at Lizard Island (northern GBR). VLPs were observed within gastrodermal and epidermal tissues, and on rarer occasions, within the mesoglea. These VLPs had similar morphologies to known prokaryotic and eukaryotic viruses in other systems. Icosahedral VLPs were observed most frequently, however, filamentous VLPs (FVLPs) and phage were also noted. There were no clear differences in VLP size, morphology or location within the tissues with respect to sample date, coral health status or site. The most common VLP morphotype exhibited icosahedral symmetry, 120-150 nm in diameter, with an electron-dense core and an electronlucent membrane. Larger VLPs of similar morphology were also common. VLPs occurred as single entities, in groups, or in dense clusters, either as free particles within coral tissues, or within membrane-bound vacuoles. VLPs were commonly observed within the perinuclear region, with mitochondria, golgi apparatus and crescent-shaped particles frequently observed within close proximity. The host(s) of these observed VLPs was not clear; however, the different sizes and morphologies of VLPs observed within A. muricata tissues suggest that viruses are infecting either the coral animal, zooxanthellae, intracellular bacteria and/or other coral-associated microbiota, or that the one host is susceptible to infection from more than one type of virus. These results add to the limited but emerging body of evidence that viruses represent another potentially important component of the coral holobiont.

Benthic meiofaunal community response to the cascading effects of herbivory within an algal halo system of the Great Barrier Reef.

Science.gov (United States)

Ollivier, Quinn R; Hammill, Edward; Booth, David J; Madin, Elizabeth M P; Hinchliffe, Charles; Harborne, Alastair R; Lovelock, Catherine E; Macreadie, Peter I; Atwood, Trisha B

2018-01-01

Benthic fauna play a crucial role in organic matter decomposition and nutrient cycling at the sediment-water boundary in aquatic ecosystems. In terrestrial systems, grazing herbivores have been shown to influence below-ground communities through alterations to plant distribution and composition, however whether similar cascading effects occur in aquatic systems is unknown. Here, we assess the relationship between benthic invertebrates and above-ground fish grazing across the 'grazing halos' of Heron Island lagoon, Australia. Grazing halos, which occur around patch reefs globally, are caused by removal of seagrass or benthic macroalgae by herbivorous fish that results in distinct bands of unvegetated sediments surrounding patch reefs. We found that benthic algal canopy height significantly increased with distance from patch reef, and that algal canopy height was positively correlated with the abundances of only one invertebrate taxon (Nematoda). Both sediment carbon to nitrogen ratios (C:N) and mean sediment particle size (μm) demonstrated a positive correlation with Nematoda and Arthropoda (predominantly copepod) abundances, respectively. These positive correlations indicate that environmental conditions are a major contributor to benthic invertebrate community distribution, acting on benthic communities in conjunction with the cascading effects of above-ground algal grazing. These results suggest that benthic communities, and the ecosystem functions they perform in this system, may be less responsive to changes in above-ground herbivorous processes than those previously studied in terrestrial systems. Understanding how above-ground organisms, and processes, affect their benthic invertebrate counterparts can shed light on how changes in aquatic communities may affect ecosystem function in previously unknown ways.

Impact of conservation areas on trophic interactions between apex predators and herbivores on coral reefs.

Science.gov (United States)

Rizzari, Justin R; Bergseth, Brock J; Frisch, Ashley J

2015-04-01

Apex predators are declining at alarming rates due to exploitation by humans, but we have yet to fully discern the impacts of apex predator loss on ecosystem function. In a management context, it is critically important to clarify the role apex predators play in structuring populations of lower trophic levels. Thus, we examined the top-down influence of reef sharks (an apex predator on coral reefs) and mesopredators on large-bodied herbivores. We measured the abundance, size structure, and biomass of apex predators, mesopredators, and herbivores across fished, no-take, and no-entry management zones in the Great Barrier Reef Marine Park, Australia. Shark abundance and mesopredator size and biomass were higher in no-entry zones than in fished and no-take zones, which indicates the viability of strictly enforced human exclusion areas as tools for the conservation of predator communities. Changes in predator populations due to protection in no-entry zones did not have a discernible influence on the density, size, or biomass of different functional groups of herbivorous fishes. The lack of a relationship between predators and herbivores suggests that top-down forces may not play a strong role in regulating large-bodied herbivorous coral reef fish populations. Given this inconsistency with traditional ecological theories of trophic cascades, trophic structures on coral reefs may need to be reassessed to enable the establishment of appropriate and effective management regimes. © 2014 Society for Conservation Biology.

Mapping Oyster Reef Habitats in Mobile Bay

Science.gov (United States)

Bolte, Danielle

2011-01-01

Oyster reefs around the world are declining rapidly, and although they haven t received as much attention as coral reefs, they are just as important to their local ecosystems and economies. Oyster reefs provide habitats for many species of fish, invertebrates, and crustaceans, as well as the next generations of oysters. Oysters are also harvested from many of these reefs and are an important segment of many local economies, including that of Mobile Bay, where oysters rank in the top five commercial marine species both by landed weight and by dollar value. Although the remaining Mobile Bay oyster reefs are some of the least degraded in the world, projected climate change could have dramatic effects on the health of these important ecosystems. The viability of oyster reefs depends on water depth and temperature, appropriate pH and salinity levels, and the amount of dissolved oxygen in the water. Projected increases in sea level, changes in precipitation and runoff patterns, and changes in pH resulting from increases in the amount of carbon dioxide dissolved in the oceans could all affect the viability of oyster reefs in the future. Human activities such as dredging and unsustainable harvesting practices are also adversely impacting the oyster reefs. Fortunately, several projects are already under way to help rebuild or support existing or previously existing oyster reefs. The success of these projects will depend on the local effects of climate change on the current and potential habitats and man s ability to recognize and halt unsustainable harvesting practices. As the extent and health of the reefs changes, it will have impacts on the Mobile Bay ecosystem and economy, changing the resources available to the people who live there and to the rest of the country, since Mobile Bay is an important national source of seafood. This project identified potential climate change impacts on the oyster reefs of Mobile Bay, including the possible addition of newly viable

Hierarchical drivers of reef-fish metacommunity structure.

Science.gov (United States)

MacNeil, M Aaron; Graham, Nicholas A J; Polunin, Nicholas V C; Kulbicki, Michel; Galzin, René; Harmelin-Vivien, Mireille; Rushton, Steven P

2009-01-01

Coral reefs are highly complex ecological systems, where multiple processes interact across scales in space and time to create assemblages of exceptionally high biodiversity. Despite the increasing frequency of hierarchically structured sampling programs used in coral-reef science, little progress has been made in quantifying the relative importance of processes operating across multiple scales. The vast majority of reef studies are conducted, or at least analyzed, at a single spatial scale, ignoring the implicitly hierarchical structure of the overall system in favor of small-scale experiments or large-scale observations. Here we demonstrate how alpha (mean local number of species), beta diversity (degree of species dissimilarity among local sites), and gamma diversity (overall species richness) vary with spatial scale, and using a hierarchical, information-theoretic approach, we evaluate the relative importance of site-, reef-, and atoll-level processes driving the fish metacommunity structure among 10 atolls in French Polynesia. Process-based models, representing well-established hypotheses about drivers of reef-fish community structure, were assembled into a candidate set of 12 hierarchical linear models. Variation in fish abundance, biomass, and species richness were unevenly distributed among transect, reef, and atoll levels, establishing the relative contribution of variation at these spatial scales to the structure of the metacommunity. Reef-fish biomass, species richness, and the abundance of most functional-groups corresponded primarily with transect-level habitat diversity and atoll-lagoon size, whereas detritivore and grazer abundances were largely correlated with potential covariates of larval dispersal. Our findings show that (1) within-transect and among-atoll factors primarily drive the relationship between alpha and gamma diversity in this reef-fish metacommunity; (2) habitat is the primary correlate with reef-fish metacommunity structure at

A Time Series Study of Lophelia pertusa and Reef Megafauna Responses to Drill Cuttings Exposure on the Norwegian Margin.

Directory of Open Access Journals (Sweden)

Autun Purser

Full Text Available As hotspots of local biodiversity in the deep sea, preservation of cold-water coral reef communities is of great importance. In European waters the most extensive reefs are found at depths of 300 - 500 m on the continental margin. In Norwegian waters many of these reefs are located in areas of interest for oil and gas exploration and production. In this study drilling was carried out in the Morvin drill field in proximity to a number of small Lophelia pertusa coral reefs (closest reefs 100 m upstream and 350 m downstream of point of waste drill material release. In a novel monitoring study, ROV video surveys of 9 reefs were conducted prior, during, immediately after and >1 year after drilling operations. Behavior of coral polyps inhabiting reefs exposed to differing concentrations of drill cuttings and drilling fluids (waste drilling material were compared. Levels of expected exposure to these waste materials were determined for each reef by modelling drill cutting transport following release, using accurate in-situ hydrodynamic data collected during the drilling period and drill cutting discharge data as parameters of a dispersal model. The presence / absence of associate reef species (Acesta excavata, Paragorgia arborea and Primnoa resedaeformis were also determined from each survey video. There were no significant differences in Lophelia pertusa polyp behavior in corals modelled to have been exposed to pulses of >25 ppm drill cutting material and those modelled to be exposed to negligible concentrations of material. From the video data collected, there were no observed degradations of reef structure over time, nor reductions of associate fauna abundance, regardless of modelled exposure concentration at any of the surveyed reefs. This study focused exclusively on adult fauna, and did not assess the potential hazard posed by waste drilling material to coral or other larvae. Video data was collected by various ROV's, using different camera and

Revealing the regime of shallow coral reefs at patch scale by continuous spatial modeling

Directory of Open Access Journals (Sweden)

Antoine eCollin

2014-11-01

Full Text Available Reliably translating real-world spatial patterns of ecosystems is critical for understanding processes susceptible to reinforce resilience. However the great majority of studies in spatial ecology use thematic maps to describe habitats and species in a binary scheme. By discretizing the transitional areas and neglecting the gradual replacement across a given space, the thematic approach may suffer from substantial limitations when interpreting patterns created by many continuous variables. Here, local and regional spectral proxies were used to design and spatially map at very fine scale a continuous index dedicated to one of the most complex seascapes, the coral reefscape. Through a groundbreaking merge of bottom-up and top-down approach, we demonstrate that three to seven-habitat continuous indices can be modeled by nine, six, four and three spectral proxies, respectively, at 0.5 m spatial resolution using hand- and spaceborne measurements. We map the seven-habitat continuous index, spanning major Indo-Pacific coral reef habitats through the far red-green normalized difference ratio over the entire lagoon of a low (Tetiaroa atoll and a high volcanic (Moorea island in French Polynesia with 84% and 82% accuracy, respectively. Further examinations of the two resulting spatial models using a customized histoscape (density function of model values distributed on a concentric strip across the reef crest-coastline distance show that Tetiaroa exhibits a greater variety of coral reef habitats than Moorea. By designing such easy-to-implement, transferrable spectral proxies of coral reef regime, this study initiates a framework for spatial ecologists tackling coral reef biodiversity, responses to stresses, perturbations and shifts. We discuss the limitations and contributions of our findings towards the study of worldwide coral reef resilience following stochastic environmental change.

Sediment-induced turbidity impairs foraging performance and prey choice of planktivorous coral reef fishes.

Science.gov (United States)

Johansen, J L; Jones, G P

2013-09-01

Sedimentation is a substantial threat to aquatic ecosystems and a primary cause of habitat degradation on near-shore coral reefs. Although numerous studies have demonstrated major impacts of sedimentation and turbidity on corals, virtually nothing is known of the sensitivity of reef fishes. Planktivorous fishes are an important trophic group that funnels pelagic energy sources into reef ecosystems. These fishes are visual predators whose foraging is likely to be impaired by turbidity, but the threshold for such effects and their magnitude are unknown. This study examined the effect of sediment-induced turbidity on foraging in four species of planktivorous damselfishes (Pomacentridae) of the Great Barrier Reef, including inshore and offshore species that potentially differ in tolerance for turbidity. An experimental flow tunnel was used to quantify their ability to catch mobile and immobile planktonic prey under different levels of turbidity and velocity in the range encountered on natural and disturbed reefs. Turbidity of just 4 NTU (nephelometric turbidity units) reduced average attack success by up to 56%, with higher effect sizes for species with offshore distributions. Only the inshore species (Neopomacentrus bankieri), which frequently encounters this turbidity on coastal reefs, could maintain high prey capture success. At elevated turbidity similar to that found on disturbed reefs (8 NTU), attack success was reduced in all species examined by up to 69%. These reductions in attack success led to a 21-24% decrease in foraging rates for all mid to outer-shelf species, in spite of increasing attack rates at high turbidity. Although effects of turbidity varied among species, it always depended heavily on prey mobility and ambient velocity. Attack success was up to 14 times lower on mobile prey, leaving species relatively incapable of foraging on anything but immobile prey at high turbidity. Effects of turbidity were particularly prominent at higher velocities, as

Not finding Nemo: limited reef-scale retention in a coral reef fish

KAUST Repository

Nanninga, Gerrit B.

2015-02-03

The spatial scale of larval dispersal is a key predictor of marine metapopulation dynamics and an important factor in the design of reserve networks. Over the past 15 yr, studies of larval dispersal in coral reef fishes have generated accumulating evidence of consistently high levels of self-recruitment and local retention at various spatial scales. These findings have, to a certain degree, created a paradigm shift toward the perception that large fractions of locally produced recruitment may be the rule rather than the exception. Here we examined the degree of localized settlement in an anemonefish, Amphiprion bicinctus, at a solitary coral reef in the central Red Sea by integrating estimates of self-recruitment obtained from genetic parentage analysis with predictions of local retention derived from a biophysical dispersal model parameterized with real-time physical forcing. Self-recruitment at the reef scale (c. 0.7 km2) was virtually absent during two consecutive January spawning events (1.4 % in 2012 and 0 % in 2013). Predicted levels of local retention at the reef scale varied temporally, but were comparatively low for both simulations (7 % in 2012 and 0 % in 2013). At the same time, the spatial scale of simulated dispersal was restricted to approximately 20 km from the source. Model predictions of reef-scale larval retention were highly dependent on biological parameters, underlining the need for further empirical validations of larval traits over a range of species. Overall, our findings present an urgent caution when assuming the potential for self-replenishment in small marine reserves.

Performance Evaluation of CRW Reef-Scale and Broad-Scale SST-Based Coral Monitoring Products in Fringing Reef Systems of Tobago

Directory of Open Access Journals (Sweden)

Shaazia S. Mohammed

2015-12-01

Full Text Available Satellite-derived sea surface temperature (SST is used to monitor coral bleaching through the National Oceanic and Atmospheric Administration’s Coral Reef Watch (CRW Decision Support System (DSS. Since 2000, a broad-scale 50 km SST was used to monitor thermal stress for coral reefs globally. However, some discrepancies were noted when applied to small-scale fringing coral reefs. To address this, CRW created a new DSS, specifically targeted at or near reef scales. Here, we evaluated the new reef-scale (5 km resolution products using in situ temperature data and coral bleaching surveys which were also compared with the heritage broad-scale (50 km for three reefs (Buccoo Reef, Culloden and Speyside of the southern Caribbean island of Tobago. Seasonal and annual biases indicated the new 5 km SST generally represents the conditions at these reefs more accurately and more consistently than the 50 km SST. Consistency between satellite and in situ temperature data influences the performance of anomaly-based predictions of bleaching: the 5 km DHW product showed better consistency with bleaching observations than the 50 km product. These results are the first to demonstrate the improvement of the 5 km products over the 50 km predecessors and support their use in monitoring thermal stress of reefs in the southern Caribbean.

Pacific Reef Assessment and Monitoring Program: Assessing and Monitoring Cryptic Reef Diversity of Colonizing Marine Invertebrates using Autonomous Reef Monitoring Structures (ARMS) Deployed at Coral Reef Sites across the U.S. Pacific from 2008 to 2012

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — To support a long-term program for sustainable management and conservation of coral reef ecosystems, from 2008, Autonomous Reef Monitoring Structures (ARMS) have...

National Coral Reef Monitoring Program: Assessing and Monitoring Cryptic Reef Diversity of Colonizing Marine Invertebrates using Autonomous Reef Monitoring Structure (ARMS) Deployed at Coral Reef Sites across the Pacific Remote Island Areas from 2011 to 2015

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Autonomous Reef Monitoring Structures (ARMS) are used to assess and monitor cryptic reef diversity of colonizing marine invertebrates in the Hawaiian and Mariana...

Transport of Calcareous Fragments by Reef Fishes.

Science.gov (United States)

Bardach, J E

1961-01-13

The weight of sand, coral scrapings, algal fragments, and other calcareous materials which pass through the intestines of reef fishes was calculated on a hectare-per-year basis. It was found that browsing omnivorous reef fishes which rely, in part, on a plant diet ingested and redeposited at least 2300 kg of such material on a 1-hectare study reef near Bermuda. Reasons are presented why this estimate, certainly in order of magnitude, should be applicable to coral reefs in general.

Nursery function of tropical back-reef systems

NARCIS (Netherlands)

Adams, A.J.; Dahlgren, C.P.; Kellison, G.T.; Kendall, M.S.; Layman, C.A.; Ley, J.A.; Nagelkerken, I.; Serafy, J.E.

2006-01-01

Similar to nearshore systems in temperate latitudes, the nursery paradigm for tropical back-reef systems is that they provide a habitat for juveniles of species that subsequently make ontogenetic shifts to adult populations on coral reefs (we refer to this as the nursery function of back-reef

Length-weight relationships of coral reef fishes from the Alacran Reef, Yucatan, Mexico

OpenAIRE

Gonzalez-Gandara, C.; Perez-Diaz, E.; Santos-Rodriguez, L.; Arias-Gonzalez, J.E.

2003-01-01

Length-weight relationships were computed for 42 species of coral reef fishes from 14 families from the Alacran Reef (Yucatan, Mexico). A total of 1 892 individuals was used for this purpose. The fish species were caught by different fishing techniques such as fishhooks, harpoons, gill and trawl nets. The sampling period was from March 1998 to January 2000.

Role of coral reefs in global ocean production

Energy Technology Data Exchange (ETDEWEB)

Crossland, C J; Hatcher, B G; Smith, S V [CSIRO Institute of Natural Resources and Environment, Dickson, ACT (Australia)

1991-01-01

Coral reefs cover some 600 thousand square kilometres of the earth's surface (0.17% of the ocean surface). First order estimates show coral reefs to contribute about 0.05% of the estimated net CO{sub 2} fixation rate of the global oceans. Gross CO{sub 2} fixation is relatively high (of the order 700 x 10{sup 12}g C year{sup -1}), but most of this material is recycled within the reefs. Excess (net) production of organic material (E) is much smaller, of the order 20 x 10{sup 12}g C year{sup -1}. 75% of E is available for export from coral reefs to adjacent areas. Comparison of estimates for net production by reefs and their surrounding oceans indicates that the excess production by coral reefs is similar to new production in the photic zone of oligotrophic oceans. Consequently, estimates for global ocean production should as a first approximation include reefal areas with the surrounding ocean when assigning average net production rates. It can be concluded that organic production by reefs plays a relatively minor role in the global scale of fluxes and storage of elements. In comparison, the companion process of biologically-mediated inorganic carbon precipitation represents a major role for reefs. While reef production does respond on local scales to variation in ocean climate, neither the absolute rates nor the amount accumulated into organic pools appear to be either sensitive indicators or accurate recorders of climatic change in most reef systems. Similarly, the productivity of most reefs should be little affected by currently predicted environmental changes resulting from the greenhouse effect. 86 refs., 2 figs., 1 tab.

Assessing cryptic reef diversity of colonizing marine invertebrates using Autonomous Reef Monitoring Structures (ARMS) deployed at coral reef sites in Batangas, Philippines from 2012-03-12 to 2015-05-31 (NCEI Accession 0162829)

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Autonomous Reef Monitoring Structures (ARMS) are used by the NOAA Coral Reef Ecosystem Program (CREP) to assess and monitor cryptic reef diversity across the...

The continuing decline of coral reefs in Bahrain.

Science.gov (United States)

Burt, John A; Al-Khalifa, Khalifa; Khalaf, Ebtesam; Alshuwaikh, Bassem; Abdulwahab, Ahmed

2013-07-30

Historically coral reefs of Bahrain were among the most extensive in the southern basin of the Arabian Gulf. However, Bahrain's reefs have undergone significant decline in the last four decades as a result of large-scale coastal development and elevated sea surface temperature events. Here we quantitatively surveyed six sites including most major coral reef habitats around Bahrain and a reef located 72 km offshore. Fleshy and turf algae now dominate Bahrain's reefs (mean: 72% cover), and live coral cover is low (mean: 5.1%). Formerly dominant Acropora were not observed at any site. The offshore Bulthama reef had the highest coral cover (16.3%) and species richness (22 of the 23 species observed, 13 of which were exclusive to this site). All reefs for which recent and historical data are available show continued degradation, and it is unlikely that they will recover under continuing coastal development and projected climate change impacts. Copyright © 2012 Elsevier Ltd. All rights reserved.

Status and review of health of Indian coral reefs

Digital Repository Service at National Institute of Oceanography (India)

Rajan, R.; Satyanarayan, C.; Raghunathan, C.; Koya, S.S.; Ravindran, J.; Manikandan, B.; Venkataraman, K.

Status of reef health incorporating species-wise cover of scleractinians has been reported covering 61 stations in 29 reef locations of the four major reef regions in India as of March 2011, alongside a review of available reef health data since...

Deposition of calcium carbonate into postglacial reefs: a test on a 'coral reef hypothesis'. Kohyoki no sangosho eno tansan calcium taiseki sokudo

Energy Technology Data Exchange (ETDEWEB)

Kayanne, H [Geological Survey of Japan, Tsukuba (Japan)

1993-06-15

This paper describes the following matters on changes in rates of deposition of calcium carbonate into postglacial coral reefs: Estimation was made on change in CaCO3 deposition in four coral reefs the data of which relating to all cross sections down to reef base have been acquired by drilling; the main deposition periods in the coral reefs formed in the postglacial period were five to six thousand years ago; the maximum deposition rate is estimated to be 2.7 [times] 10[sup 14] gC per one thousand years under an assumption that the total deposition amount in postglacial coral reefs is 1.2 [times] 10[sup 18] gC (converted to carbon amount); the recent deposition rate is (1/7.5) that of the former rate; from information obtained on submerged coral reefs, deposition amounts in coral reefs before 10,000 years ago are judged to have been smaller than those thereafter; and the above knowledges do not support the 'coral reef hypothesis' by Berger et al. that deposition of calcium carbonate into postglacial coral reefs has occurred from 15,000 years ago to 10,000 years ago. 30 refs., 2 figs.

Microbial to reef scale interactions between the reef-building coral Montastraea annularis and benthic algae

NARCIS (Netherlands)

Barott, K.L.; Rodriguez-Mueller, B; Youle, M.; Marhaver, K.L.; Vermeij, M.J.A.; Smith, J.E.; Rohwer, F.L.

2012-01-01

Competition between reef-building corals and benthic algae is of key importance for reef dynamics. These interactions occur on many spatial scales, ranging from chemical to regional. Using microprobes, 16S rDNA pyrosequencing and underwater surveys, we examined the interactions between the

Macroalgal herbivory on recovering versus degrading coral reefs

Science.gov (United States)

Chong-Seng, K. M.; Nash, K. L.; Bellwood, D. R.; Graham, N. A. J.

2014-06-01

Macroalgal-feeding fishes are considered to be a key functional group on coral reefs due to their role in preventing phase shifts from coral to macroalgal dominance, and potentially reversing the shift should it occur. However, assessments of macroalgal herbivory using bioassay experiments are primarily from systems with relatively high coral cover. This raises the question of whether continued functionality can be ensured in degraded systems. It is clearly important to determine whether the species that remove macroalgae on coral-dominated reefs will still be present and performing significant algal removal on macroalgal-dominated reefs. We compared the identity and effectiveness of macroalgal-feeding fishes on reefs in two conditions post-disturbance—those regenerating with high live coral cover (20-46 %) and those degrading with high macroalgal cover (57-82 %). Using filmed Sargassum bioassays, we found significantly different Sargassum biomass loss between the two conditions; mean assay weight loss due to herbivory was 27.9 ± 4.9 % on coral-dominated reefs and 2.2 ± 1.1 % on reefs with high macroalgal cover. However, once standardised for the availability of macroalgae on the reefs, the rates of removal were similar between the two reef conditions (4.8 ± 4.1 g m-2 h-1 on coral-dominated and 5.3 ± 2.1 g m-2 h-1 on macroalgal-dominated reefs). Interestingly, the Sargassum-assay consumer assemblages differed between reef conditions; nominally grazing herbivores, Siganus puelloides and Chlorurus sordidus, and the browser , Siganus sutor, dominated feeding on high coral cover reefs, whereas browsing herbivores, Naso elegans, Naso unicornis, and Leptoscarus vaigiensis, prevailed on macroalgal-dominated reefs. It appeared that macroalgal density in the surrounding habitat had a strong influence on the species driving the process of macroalgal removal. This suggests that although the function of macroalgal removal may continue, the species responsible may change

Reef-fidelity and migration of tiger sharks, Galeocerdo cuvier, across the coral sea

KAUST Repository

Werry, Jonathan M.

2014-01-08

Knowledge of the habitat use and migration patterns of large sharks is important for assessing the effectiveness of large predator Marine Protected Areas (MPAs), vulnerability to fisheries and environmental influences, and management of shark-human interactions. Here we compare movement, reef-fidelity, and ocean migration for tiger sharks, Galeocerdo cuvier, across the Coral Sea, with an emphasis on New Caledonia. Thirty-three tiger sharks (1.54 to 3.9 m total length) were tagged with passive acoustic transmitters and their localised movements monitored on receiver arrays in New Caledonia, the Chesterfield and Lord Howe Islands in the Coral Sea, and the east coast of Queensland, Australia. Satellite tags were also used to determine habitat use and movements among habitats across the Coral Sea. Sub-adults and one male adult tiger shark displayed year-round residency in the Chesterfields with two females tagged in the Chesterfields and detected on the Great Barrier Reef, Australia, after 591 and 842 days respectively. In coastal barrier reefs, tiger sharks were transient at acoustic arrays and each individual demonstrated a unique pattern of occurrence. From 2009 to 2013, fourteen sharks with satellite and acoustic tags undertook wide-ranging movements up to 1114 km across the Coral Sea with eight detected back on acoustic arrays up to 405 days after being tagged. Tiger sharks dove 1136 m and utilised three-dimensional activity spaces averaged at 2360 km3. The Chesterfield Islands appear to be important habitat for sub-adults and adult male tiger sharks. Management strategies need to consider the wide-ranging movements of large (sub-adult and adult) male and female tiger sharks at the individual level, whereas fidelity to specific coastal reefs may be consistent across groups of individuals. Coastal barrier reef MPAs, however, only afford brief protection for large tiger sharks, therefore determining the importance of other oceanic Coral Sea reefs should be a

Reef-fidelity and migration of tiger sharks, Galeocerdo cuvier, across the coral sea

KAUST Repository

Werry, Jonathan M.; Planes, Serge; Berumen, Michael L.; Lee, Kate A.; Braun, Camrin D.; Clua, Eric

2014-01-01

Knowledge of the habitat use and migration patterns of large sharks is important for assessing the effectiveness of large predator Marine Protected Areas (MPAs), vulnerability to fisheries and environmental influences, and management of shark-human interactions. Here we compare movement, reef-fidelity, and ocean migration for tiger sharks, Galeocerdo cuvier, across the Coral Sea, with an emphasis on New Caledonia. Thirty-three tiger sharks (1.54 to 3.9 m total length) were tagged with passive acoustic transmitters and their localised movements monitored on receiver arrays in New Caledonia, the Chesterfield and Lord Howe Islands in the Coral Sea, and the east coast of Queensland, Australia. Satellite tags were also used to determine habitat use and movements among habitats across the Coral Sea. Sub-adults and one male adult tiger shark displayed year-round residency in the Chesterfields with two females tagged in the Chesterfields and detected on the Great Barrier Reef, Australia, after 591 and 842 days respectively. In coastal barrier reefs, tiger sharks were transient at acoustic arrays and each individual demonstrated a unique pattern of occurrence. From 2009 to 2013, fourteen sharks with satellite and acoustic tags undertook wide-ranging movements up to 1114 km across the Coral Sea with eight detected back on acoustic arrays up to 405 days after being tagged. Tiger sharks dove 1136 m and utilised three-dimensional activity spaces averaged at 2360 km3. The Chesterfield Islands appear to be important habitat for sub-adults and adult male tiger sharks. Management strategies need to consider the wide-ranging movements of large (sub-adult and adult) male and female tiger sharks at the individual level, whereas fidelity to specific coastal reefs may be consistent across groups of individuals. Coastal barrier reef MPAs, however, only afford brief protection for large tiger sharks, therefore determining the importance of other oceanic Coral Sea reefs should be a

Reef-fidelity and migration of tiger sharks, Galeocerdo cuvier, across the Coral Sea.

Science.gov (United States)

Werry, Jonathan M; Planes, Serge; Berumen, Michael L; Lee, Kate A; Braun, Camrin D; Clua, Eric

2014-01-01

Knowledge of the habitat use and migration patterns of large sharks is important for assessing the effectiveness of large predator Marine Protected Areas (MPAs), vulnerability to fisheries and environmental influences, and management of shark-human interactions. Here we compare movement, reef-fidelity, and ocean migration for tiger sharks, Galeocerdo cuvier, across the Coral Sea, with an emphasis on New Caledonia. Thirty-three tiger sharks (1.54 to 3.9 m total length) were tagged with passive acoustic transmitters and their localised movements monitored on receiver arrays in New Caledonia, the Chesterfield and Lord Howe Islands in the Coral Sea, and the east coast of Queensland, Australia. Satellite tags were also used to determine habitat use and movements among habitats across the Coral Sea. Sub-adults and one male adult tiger shark displayed year-round residency in the Chesterfields with two females tagged in the Chesterfields and detected on the Great Barrier Reef, Australia, after 591 and 842 days respectively. In coastal barrier reefs, tiger sharks were transient at acoustic arrays and each individual demonstrated a unique pattern of occurrence. From 2009 to 2013, fourteen sharks with satellite and acoustic tags undertook wide-ranging movements up to 1114 km across the Coral Sea with eight detected back on acoustic arrays up to 405 days after being tagged. Tiger sharks dove 1136 m and utilised three-dimensional activity spaces averaged at 2360 km³. The Chesterfield Islands appear to be important habitat for sub-adults and adult male tiger sharks. Management strategies need to consider the wide-ranging movements of large (sub-adult and adult) male and female tiger sharks at the individual level, whereas fidelity to specific coastal reefs may be consistent across groups of individuals. Coastal barrier reef MPAs, however, only afford brief protection for large tiger sharks, therefore determining the importance of other oceanic Coral Sea reefs should be a

Diving down the reefs? Intensive diving tourism threatens the reefs of the northern Red Sea.

Science.gov (United States)

Hasler, Harald; Ott, Jörg A

2008-10-01

Intensive recreational SCUBA diving threatens coral reef ecosystems. The reefs at Dahab, South Sinai, Egypt, are among the world's most dived (>30,000 dives y(-1)). We compared frequently dived sites to sites with no or little diving. Benthic communities and condition of corals were examined by the point intercept sampling method in the reef crest zone (3m) and reef slope zone (12 m). Additionally, the abundance of corallivorous and herbivorous fish was estimated based on the visual census method. Sediments traps recorded the sedimentation rates caused by SCUBA divers. Zones subject to intensive SCUBA diving showed a significantly higher number of broken and damaged corals and significantly lower coral cover. Reef crest coral communities were significantly more affected than those of the reef slope: 95% of the broken colonies were branching ones. No effect of diving on the abundance of corallivorous and herbivorous fish was evident. At heavily used dive sites, diver-related sedimentation rates significantly decreased with increasing distance from the entrance, indicating poor buoyancy regulation at the initial phase of the dive. The results show a high negative impact of current SCUBA diving intensities on coral communities and coral condition. Corallivorous and herbivorous fishes are apparently not yet affected, but are endangered if coral cover decline continues. Reducing the number of dives per year, ecologically sustainable dive plans for individual sites, and reinforcing the environmental education of both dive guides and recreational divers are essential to conserve the ecological and the aesthetic qualities of these dive sites.

75 FR 48934 - Coral Reef Conservation Program Implementation Guidelines

Science.gov (United States)

2010-08-12

...-01] RIN 0648-ZC19 Coral Reef Conservation Program Implementation Guidelines AGENCY: National Oceanic... Guidelines (Guidelines) for the Coral Reef Conservation Program (CRCP or Program) under the Coral Reef... assistance for coral reef conservation projects under the Act. NOAA revised the Implementation Guidelines for...

Pattern and intensity of human impact on coral reefs depend on depth along the reef profile and on the descriptor adopted

Science.gov (United States)

Nepote, Ettore; Bianchi, Carlo Nike; Chiantore, Mariachiara; Morri, Carla; Montefalcone, Monica

2016-09-01

Coral reefs are threatened by multiple global and local disturbances. The Maldives, already heavily hit by the 1998 mass bleaching event, are currently affected also by growing tourism and coastal development that may add to global impacts. Most of the studies investigating effects of local disturbances on coral reefs assessed the response of communities along a horizontal distance from the impact source. This study investigated the status of a Maldivian coral reef around an island where an international touristic airport has been recently (2009-2011) built, at different depths along the reef profile (5-20 m depth) and considering the change in the percentage of cover of five different non-taxonomic descriptors assessed through underwater visual surveys: hard corals, soft corals, other invertebrates, macroalgae and abiotic attributes. Eight reefs in areas not affected by any coastal development were used as controls and showed a reduction of hard coral cover and an increase of abiotic attributes (i.e. sand, rock, coral rubble) at the impacted reef. However, hard coral cover, the most widely used descriptor of coral reef health, was not sufficient on its own to detect subtle indirect effects that occurred down the reef profile. Selecting an array of descriptors and considering different depths, where corals may find a refuge from climate impacts, could guide the efforts of minimising local human pressures on coral reefs.

Coral Reef and Coastal Ecosystems Decision Support Workshop April 27-29, 2010 Caribbean Coral Reef Institute, La Parguera, Puerto Rico

Science.gov (United States)

The U.S. Environmental Protection Agency (EPA) and Caribbean Coral Reef Institute (CCRI) hosted a Coral Reef and Coastal Ecosystems Decision Support Workshop on April 27-28, 2010 at the Caribbean Coral Reef Institute in La Parguera, Puerto Rico. Forty-three participants, includin...

Re-creating missing population baselines for Pacific reef sharks.

Science.gov (United States)

Nadon, Marc O; Baum, Julia K; Williams, Ivor D; McPherson, Jana M; Zgliczynski, Brian J; Richards, Benjamin L; Schroeder, Robert E; Brainard, Russell E

2012-06-01

Sharks and other large predators are scarce on most coral reefs, but studies of their historical ecology provide qualitative evidence that predators were once numerous in these ecosystems. Quantifying density of sharks in the absence of humans (baseline) is, however, hindered by a paucity of pertinent time-series data. Recently researchers have used underwater visual surveys, primarily of limited spatial extent or nonstandard design, to infer negative associations between reef shark abundance and human populations. We analyzed data from 1607 towed-diver surveys (>1 ha transects surveyed by observers towed behind a boat) conducted at 46 reefs in the central-western Pacific Ocean, reefs that included some of the world's most pristine coral reefs. Estimates of shark density from towed-diver surveys were substantially lower (sharks observed in towed-diver surveys and human population in models that accounted for the influence of oceanic primary productivity, sea surface temperature, reef area, and reef physical complexity. We used these models to estimate the density of sharks in the absence of humans. Densities of gray reef sharks (Carcharhinus amblyrhynchos), whitetip reef sharks (Triaenodon obesus), and the group "all reef sharks" increased substantially as human population decreased and as primary productivity and minimum sea surface temperature (or reef area, which was highly correlated with temperature) increased. Simulated baseline densities of reef sharks under the absence of humans were 1.1-2.4/ha for the main Hawaiian Islands, 1.2-2.4/ha for inhabited islands of American Samoa, and 0.9-2.1/ha for inhabited islands in the Mariana Archipelago, which suggests that density of reef sharks has declined to 3-10% of baseline levels in these areas. ©2012 Society for Conservation Biology No claim to original US government works.

Coral Reef Coverage Percentage on Binor Paiton-Probolinggo Seashore

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Dwi Budi Wiyanto

2016-01-01

Full Text Available The coral reef damage in Probolinggo region was expected to be caused by several factors. The first one comes from its society that exploits fishery by using cyanide toxin and bomb. The second one goes to the extraction of coral reef, which is used as decoration or construction materials. The other factor is likely caused by the existence of large industry on the seashore, such as Electric Steam Power Plant (PLTU Paiton and others alike. Related to the development of coral reef ecosystem, availability of an accurate data is crucially needed to support the manner of future policy, so the research of coral reef coverage percentage needs to be conducted continuously. The aim of this research is to collect biological data of coral reef and to identify coral reef coverage percentage in the effort of constructing coral reef condition basic data on Binor, Paiton, and Probolinggo regency seashore. The method used in this research is Line Intercept Transect (LIT method. LIT method is a method that used to decide benthic community on coral reef based on percentage growth, and to take note of benthic quantity along transect line. Percentage of living coral coverage in 3 meters depth on this Binor Paiton seashore that may be categorized in a good condition is 57,65%. While the rest are dead coral that is only 1,45%, other life form in 23,2%, and non-life form in 17,7%. A good condition of coral reef is caused by coral reef transplantation on the seashore, so this coral reef is dominated by Acropora Branching. On the other hand, Mortality Index (IM of coral reef resulted in 24,5%. The result from observation and calculation of coral reef is dominated by Hard Coral in Acropora Branching (ACB with coral reef coverage percentage of 39%, Coral Massive (CM with coral reef coverage percentage of 2,85%, Coral Foliose (CF with coral reef coverage percentage of 1,6%, and Coral Mushroom (CRM with coral reef coverage percentage of 8,5%. Observation in 10 meters depth

Coral Reef Coverage Percentage on Binor Paiton-Probolinggo Seashore

Directory of Open Access Journals (Sweden)

Dwi Budi Wiyanto

2016-02-01

Full Text Available The coral reef damage in Probolinggo region was expected to be caused by several factors. The first one comes from its society that exploits fishery by using cyanide toxin and bomb. The second one goes to the extraction of coral reef, which is used as decoration or construction materials. The other factor is likely caused by the existence of large industry on the seashore, such as Electric Steam Power Plant (PLTU Paiton and others alike. Related to the development of coral reef ecosystem, availability of an accurate data is crucially needed to support the manner of future policy, so the research of coral reef coverage percentage needs to be conducted continuously. The aim of this research is to collect biological data of coral reef and to identify coral reef coverage percentage in the effort of constructing coral reef condition basic data on Binor, Paiton, and Probolinggo regency seashore. The method used in this research is Line Intercept Transect (LIT method. LIT method is a method that used to decide benthic community on coral reef based on percentage growth, and to take note of benthic quantity along transect line. Percentage of living coral coverage in 3 meters depth on this Binor Paiton seashore that may be categorized in a good condition is 57,65%. While the rest are dead coral that is only 1,45%, other life form in 23,2%, and non-life form in 17,7%. A good condition of coral reef is caused by coral reef transplantation on the seashore, so this coral reef is dominated by Acropora Branching. On the other hand, Mortality Index (IM of coral reef resulted in 24,5%. The result from observation and calculation of coral reef is dominated by Hard Coral in Acropora Branching (ACB with coral reef coverage percentage of 39%, Coral Massive (CM with coral reef coverage percentage of 2,85%, Coral Foliose (CF with coral reef coverage percentage of 1,6%, and Coral Mushroom (CRM with coral reef coverage percentage of 8,5%. Observation in 10 meters depth

Reef sharks: recent advances in ecological understanding to inform conservation.

Science.gov (United States)

Osgood, G J; Baum, J K

2015-12-01

Sharks are increasingly being recognized as important members of coral-reef communities, but their overall conservation status remains uncertain. Nine of the 29 reef-shark species are designated as data deficient in the IUCN Red List, and three-fourths of reef sharks had unknown population trends at the time of their assessment. Fortunately, reef-shark research is on the rise. This new body of research demonstrates reef sharks' high site restriction, fidelity and residency on coral reefs, their broad trophic roles connecting reef communities and their high population genetic structure, all information that should be useful for their management and conservation. Importantly, recent studies on the abundance and population trends of the three classic carcharhinid reef sharks (grey reef shark Carcharhinus amblyrhynchos, blacktip reef shark Carcharhinus melanopterus and whitetip reef shark Triaenodon obesus) may contribute to reassessments identifying them as more vulnerable than currently realized. Because over half of the research effort has focused on only these three reef sharks and the nurse shark Ginglymostoma cirratum in only a few locales, there remain large taxonomic and geographic gaps in reef-shark knowledge. As such, a large portion of reef-shark biodiversity remains uncharacterized despite needs for targeted research identified in their red list assessments. A research agenda for the future should integrate abundance, life history, trophic ecology, genetics, habitat use and movement studies, and expand the breadth of such research to understudied species and localities, in order to better understand the conservation requirements of these species and to motivate effective conservation solutions. © 2015 The Fisheries Society of the British Isles.

Octocoral Species Assembly and Coexistence in Caribbean Coral Reefs.

Science.gov (United States)

Velásquez, Johanna; Sánchez, Juan A

2015-01-01

What are the determinant factors of community assemblies in the most diverse ecosystem in the ocean? Coral reefs can be divided in continental (i.e., reefs that develop on the continental shelf, including siliciclastic reefs) and oceanic (i.e., far off the continental shelf, usually on volcanic substratum); whether or not these habitat differences impose community-wide ecological divergence or species exclusion/coexistence with evolutionary consequences, is unknown. Studying Caribbean octocorals as model system, we determined the phylogenetic community structure in a coral reef community, making emphasis on species coexistence evidenced on trait evolution and environmental feedbacks. Forty-nine species represented in five families constituted the species pool from which a phylogenetic tree was reconstructed using mtDNA. We included data from 11 localities in the Western Caribbean (Colombia) including most reef types. To test diversity-environment and phenotype-environment relationships, phylogenetic community structure and trait evolution we carried out comparative analyses implementing ecological and evolutionary approaches. Phylogenetic inferences suggest clustering of oceanic reefs (e.g., atolls) contrasting with phylogenetic overdispersion of continental reefs (e.g., reefs banks). Additionally, atolls and barrier reefs had the highest species diversity (Shannon index) whereas phylogenetic diversity was higher in reef banks. The discriminant component analysis supported this differentiation between oceanic and continental reefs, where continental octocoral species tend to have greater calyx apertures, thicker branches, prominent calyces and azooxanthellate species. This analysis also indicated a clear separation between the slope and the remaining habitats, caused by the presence or absence of Symbiodinium. K statistic analysis showed that this trait is conserved as well as the branch shape. There was strong octocoral community structure with opposite diversity

Octocoral Species Assembly and Coexistence in Caribbean Coral Reefs.

Directory of Open Access Journals (Sweden)

Johanna Velásquez

Full Text Available What are the determinant factors of community assemblies in the most diverse ecosystem in the ocean? Coral reefs can be divided in continental (i.e., reefs that develop on the continental shelf, including siliciclastic reefs and oceanic (i.e., far off the continental shelf, usually on volcanic substratum; whether or not these habitat differences impose community-wide ecological divergence or species exclusion/coexistence with evolutionary consequences, is unknown.Studying Caribbean octocorals as model system, we determined the phylogenetic community structure in a coral reef community, making emphasis on species coexistence evidenced on trait evolution and environmental feedbacks. Forty-nine species represented in five families constituted the species pool from which a phylogenetic tree was reconstructed using mtDNA. We included data from 11 localities in the Western Caribbean (Colombia including most reef types. To test diversity-environment and phenotype-environment relationships, phylogenetic community structure and trait evolution we carried out comparative analyses implementing ecological and evolutionary approaches.Phylogenetic inferences suggest clustering of oceanic reefs (e.g., atolls contrasting with phylogenetic overdispersion of continental reefs (e.g., reefs banks. Additionally, atolls and barrier reefs had the highest species diversity (Shannon index whereas phylogenetic diversity was higher in reef banks. The discriminant component analysis supported this differentiation between oceanic and continental reefs, where continental octocoral species tend to have greater calyx apertures, thicker branches, prominent calyces and azooxanthellate species. This analysis also indicated a clear separation between the slope and the remaining habitats, caused by the presence or absence of Symbiodinium. K statistic analysis showed that this trait is conserved as well as the branch shape.There was strong octocoral community structure with opposite

Parrotfish size: a simple yet useful alternative indicator of fishing effects on Caribbean reefs?

Science.gov (United States)

Vallès, Henri; Oxenford, Hazel A

2014-01-01

There is great need to identify simple yet reliable indicators of fishing effects within the multi-species, multi-gear, data-poor fisheries of the Caribbean. Here, we investigate links between fishing pressure and three simple fish metrics, i.e. average fish weight (an estimate of average individual fish size), fish density and fish biomass, derived from (1) the parrotfish family, a ubiquitous herbivore family across the Caribbean, and (2) three fish groups of "commercial" carnivores including snappers and groupers, which are widely-used as indicators of fishing effects. We hypothesize that, because most Caribbean reefs are being heavily fished, fish metrics derived from the less vulnerable parrotfish group would exhibit stronger relationships with fishing pressure on today's Caribbean reefs than those derived from the highly vulnerable commercial fish groups. We used data from 348 Atlantic and Gulf Rapid Reef Assessment (AGRRA) reef-surveys across the Caribbean to assess relationships between two independent indices of fishing pressure (one derived from human population density data, the other from open to fishing versus protected status) and the three fish metrics derived from the four aforementioned fish groups. We found that, although two fish metrics, average parrotfish weight and combined biomass of selected commercial species, were consistently negatively linked to the indices of fishing pressure across the Caribbean, the parrotfish metric consistently outranked the latter in the strength of the relationship, thus supporting our hypothesis. Overall, our study highlights that (assemblage-level) average parrotfish size might be a useful alternative indicator of fishing effects over the typical conditions of most Caribbean shallow reefs: moderate-to-heavy levels of fishing and low abundance of highly valued commercial species.

Tourism, Reef Condition and Visitor Satisfaction in Watamu Marine ...

African Journals Online (AJOL)

Abstract—Reef-based tourism is known to put environmental pressure on reefs but its consequences on the ecological and economic sustainability of Marine. Protected Areas is unknown. Previous research suggests that, if reef conditions decline, then tourism on a reef will also suffer, but is this always the case? This.

Unraveling the structure and composition of Varadero Reef, an improbable and imperiled coral reef in the Colombian Caribbean

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Valeria Pizarro

2017-12-01

Full Text Available Coral reefs are commonly associated with oligotrophic, well-illuminated waters. In 2013, a healthy coral reef was discovered in one of the least expected places within the Colombian Caribbean: at the entrance of Cartagena Bay, a highly-polluted system that receives industrial and sewage waste, as well as high sediment and freshwater loads from an outlet of the Magdalena River (the longest and most populated river basin in Colombia. Here we provide the first characterization of Varadero Reef’s geomorphology and biological diversity. We also compare these characteristics with those of a nearby reference reef, Barú Reef, located in an area much less influenced by the described polluted system. Below the murky waters, we found high coral cover of 45.1% (±3.9; up to 80% in some sectors, high species diversity, including 42 species of scleractinian coral, 38 of sponge, three of lobster, and eight of sea urchin; a fish community composed of 61 species belonging to 24 families, and the typical zonation of a Caribbean fringing reef. All attributes found correspond to a reef that, according to current standards should be considered in “good condition”. Current plans to dredge part of Varadero threaten the survival of this reef. There is, therefore, an urgent need to describe the location and characteristics of Varadero as a first step towards gaining acknowledgement of its existence and garnering inherent legal and environmental protections.

Compsopogon cf. coeruleus, a benthic red alga (Rhodophyta) new to the Laurentian Great Lakes

Science.gov (United States)

Manny, Bruce A.; Edsall, Thomas A.; Wujek, Daniel E.

1991-01-01

We found Compsopogon cf. coeruleus for the first time in the Laurentian Great Lakes, growing on limestone rocks at a depth of 21 m on Six Fathom Bank in central Lake Huron. It is the first freshwater red alga to be found in the Great Lakes and the only red alga ever found on an offshore reef in the Great Lakes. However, because this alga usually inhabits water 10–28 °C and has not survived freezing winter temperatures elsewhere, it may not be a permanent member of the flora.

Challenges of transferring models of fish abundance between coral reefs.

Science.gov (United States)

Sequeira, Ana M M; Mellin, Camille; Lozano-Montes, Hector M; Meeuwig, Jessica J; Vanderklift, Mathew A; Haywood, Michael D E; Babcock, Russell C; Caley, M Julian

2018-01-01

Reliable abundance estimates for species are fundamental in ecology, fisheries, and conservation. Consequently, predictive models able to provide reliable estimates for un- or poorly-surveyed locations would prove a valuable tool for management. Based on commonly used environmental and physical predictors, we developed predictive models of total fish abundance and of abundance by fish family for ten representative taxonomic families for the Great Barrier Reef (GBR) using multiple temporal scenarios. We then tested if models developed for the GBR (reference system) could predict fish abundances at Ningaloo Reef (NR; target system), i.e., if these GBR models could be successfully transferred to NR. Models of abundance by fish family resulted in improved performance (e.g., 44.1% fish abundance (9% fish species richness from the GBR to NR, transferability for these fish abundance models was poor. When compared with observations of fish abundance collected in NR, our transferability results had low validation scores ( R 2   0.05). High spatio-temporal variability of patterns in fish abundance at the family and population levels in both reef systems likely affected the transferability of these models. Inclusion of additional predictors with potential direct effects on abundance, such as local fishing effort or topographic complexity, may improve transferability of fish abundance models. However, observations of these local-scale predictors are often not available, and might thereby hinder studies on model transferability and its usefulness for conservation planning and management.

Interspecific Hybridization May Provide Novel Opportunities for Coral Reef Restoration

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Wing Yan Chan

2018-05-01

Full Text Available Climate change and other anthropogenic disturbances have created an era characterized by the inability of most ecosystems to maintain their original, pristine states, the Anthropocene. Investigating new and innovative strategies that may facilitate ecosystem restoration is thus becoming increasingly important, particularly for coral reefs around the globe which are deteriorating at an alarming rate. The Great Barrier Reef (GBR lost half its coral cover between 1985 and 2012, and experienced back-to-back heat-induced mass bleaching events and high coral mortality in 2016 and 2017. Here we investigate the efficacy of interspecific hybridization as a tool to develop coral stock with enhanced climate resilience. We crossed two Acropora species pairs from the GBR and examined several phenotypic traits over 28 weeks of exposure to ambient and elevated temperature and pCO2. While elevated temperature and pCO2 conditions negatively affected size and survival of both purebreds and hybrids, higher survival and larger recruit size were observed in some of the hybrid offspring groups under both ambient and elevated conditions. Further, interspecific hybrids had high fertilization rates, normal embryonic development, and similar Symbiodinium uptake and photochemical efficiency as purebred offspring. While the fitness of these hybrids in the field and their reproductive and backcrossing potential remain to be investigated, current findings provide proof-of-concept that interspecific hybridization may produce genotypes with enhanced climate resilience, and has the potential to increase the success of coral reef restoration initiatives.

CORAL REEF BIOLOGICAL CRITERIA: USING THE CLEAN ...

Science.gov (United States)

Coral reefs are declining at unprecedented rates worldwide due to multiple interactive stressors including climate change and land-based sources of pollution. The Clean Water Act (CWA) can be a powerful legal instrument for protecting water resources, including the biological inhabitants of coral reefs. The objective of the CWA is to restore and maintain the chemical, physical and biological integrity of water resources. Coral reef protection and restoration under the Clean Water Act begins with water quality standards - provisions of state or Federal law that consist of a designated use(s) for the waters of the United States and water quality criteria sufficient to protect the uses. Aquatic life use is the designated use that is measured by biological criteria (biocriteria). Biocriteria are expectations set by a jurisdiction for the quality and quantity of living aquatic resources in a defined waterbody. Biocriteria are an important addition to existing management tools for coral reef ecosystems. The Technical Support Document “Coral Reef Biological Criteria: Using the Clean Water Act to Protect a National Treasure” will provide a framework to aid States and Territories in their development, adoption, and implementation of coral reef biocriteria in their respective water quality standards. The Technical Support Document “Coral Reef Biological Criteria: Using the Clean Water Act to Protect a National Treasure” will provide a framework for coral re

Social interactions among grazing reef fish drive material flux in a coral reef ecosystem.

Science.gov (United States)

Gil, Michael A; Hein, Andrew M

2017-05-02

In human financial and social systems, exchanges of information among individuals cause speculative bubbles, behavioral cascades, and other correlated actions that profoundly influence system-level function. Exchanges of information are also widespread in ecological systems, but their effects on ecosystem-level processes are largely unknown. Herbivory is a critical ecological process in coral reefs, where diverse assemblages of fish maintain reef health by controlling the abundance of algae. Here, we show that social interactions have a major effect on fish grazing rates in a reef ecosystem. We combined a system for observing and manipulating large foraging areas in a coral reef with a class of dynamical decision-making models to reveal that reef fish use information about the density and actions of nearby fish to decide when to feed on algae and when to flee foraging areas. This "behavioral coupling" causes bursts of feeding activity that account for up to 68% of the fish community's consumption of algae. Moreover, correlations in fish behavior induce a feedback, whereby each fish spends less time feeding when fewer fish are present, suggesting that reducing fish stocks may not only reduce total algal consumption but could decrease the amount of algae each remaining fish consumes. Our results demonstrate that social interactions among consumers can have a dominant effect on the flux of energy and materials through ecosystems, and our methodology paves the way for rigorous in situ measurements of the behavioral rules that underlie ecological rates in other natural systems.

Species identity and depth predict bleaching severity in reef-building corals: shall the deep inherit the reef?

Science.gov (United States)

Muir, Paul R; Marshall, Paul A; Abdulla, Ameer; Aguirre, J David

2017-10-11

Mass bleaching associated with unusually high sea temperatures represents one of the greatest threats to corals and coral reef ecosystems. Deeper reef areas are hypothesized as potential refugia, but the susceptibility of Scleractinian species over depth has not been quantified. During the most severe bleaching event on record, we found up to 83% of coral cover severely affected on Maldivian reefs at a depth of 3-5 m, but significantly reduced effects at 24-30 m. Analysis of 153 species' responses showed depth, shading and species identity had strong, significant effects on susceptibility. Overall, 73.3% of the shallow-reef assemblage had individuals at a depth of 24-30 m with reduced effects, potentially mitigating local extinction and providing a source of recruits for population recovery. Although susceptibility was phylogenetically constrained, species-level effects caused most lineages to contain some partially resistant species. Many genera showed wide variation between species, including Acropora, previously considered highly susceptible. Extinction risk estimates showed species and lineages of concern and those likely to dominate following repeated events. Our results show that deeper reef areas provide refuge for a large proportion of Scleractinian species during severe bleaching events and that the deepest occurring individuals of each population have the greatest potential to survive and drive reef recovery. © 2017 The Author(s).

Mapping Mesophotic Reefs Along the Brazilian Continental Margin

Science.gov (United States)

Bastos, A.; Moura, R.; Amado Filho, G.; Ferreira, L.; Boni, G.; Vedoato, F.; D'Agostini, D.; Lavagnino, A. C.; Leite, M. D.; Quaresma, V.

2017-12-01

Submerged or drowned reefs constitute an important geological record of sea level variations, forming the substrate for the colonization of modern benthic mesophotic communities. Although mapping mesophotic reefs has increased in the last years, their spatial distribution is poorly known and the worldwide occurrence of this reef habitat maybe underestimated. The importance in recognizing the distribution of mesophotic reefs is that they can act as a refuge for corals during unsuitable environmental conditions and a repository for shallow water corals. Here we present the result of several acoustic surveys that mapped and discovered new mesophotic reefs along the Eastern and Equatorial Brazilian Continental Margin. Seabed mapping was carried out using multibeam and side scan sonars. Ground truthing was obtained using drop camera or scuba diving. Mesophotic reefs were mapped in water depths varying from 30 to 100m and under distinct oceanographic conditions, especially in terms of river load input and shelf width. Reefs showed distinct morphologies, from low relief banks and paleovalleys to shelf edge ridges. Extensive occurrence of low relief banks were mapped along the most important coralline complex province in the South Atlantic, the Abrolhos Shelf. These 30 to 40m deep banks, have no more than 3 meters in height and may represent fringing reefs formed during sea level stabilization. Paleovalleys mapped along the eastern margin showed the occurrence of coralgal ledges along the channel margins. Paleovalleys are usually deeper than 45m and are associated with outer shelf rhodolith beds. Shelf edge ridges (80 to 120m deep) were mapped along both margins and are related to red algal encrusting irregular surfaces that have more than 3m in height, forming a rigid substrate for coral growth. Along the Equatorial Margin, off the Amazon mouth, shelf edge patch reefs and rhodolith beds forming encrusting surfaces and shelf edge ridges were mapped in water depths greater

Developing a multi-stressor gradient for coral reefs

Science.gov (United States)

Coral reefs are often found near coastal waters where multiple anthropogenic stressors co-occur at areas of human disturbance. Developing coral reef biocriteria under the U.S. Clean Water Act requires relationships between anthropogenic stressors and coral reef condition to be es...

Modeling Reef Island Morphodynamics in Profile and Plan View

Science.gov (United States)

Ashton, A. D.; Ortiz, A. C.; Lorenzo-Trueba, J.

2016-12-01

Reef islands are carbonate detrital landforms perched atop shallow reef flats of atolls and barrier reef systems. Often comprising the only subaerial, inhabitable land of many island chains and island nations, these low-lying, geomorphically active landforms face considerable hazards from climate change. While there hazards include wave overtopping and groundwater salinization, sea-level rise and wave climate change will affect sediment transport and shoreline dynamics, including the possibility for wholesale reorganization of the islands themselves. Here we present a simplified morphodynamic model that can spatially quantify the potential impacts of climate change on reef islands. Using parameterizations of sediment transport pathways and feedbacks from previously presented XBeach modeling results, we investigate how sea-level rise, change in storminess, and different carbonate production rates can affect the profile evolution of reef islands, including feedbacks with the shallow reef flat that bounds the islands offshore (and lagoonward). Model results demonstrate that during rising sea levels, the reef flat can serve as a sediment trap, starving reef islands of detrital sediment that could otherwise fortify the shore against sea-level-rise-driven erosion. On the other hand, if reef flats are currently shallow (likely due to geologic inheritance or biologic cementation processes) such that sea-level rise does not result in sediment accumulation on the flat, reef island shorelines may be more resilient to rising seas. We extend the model in plan view to examine how long-term (decadal) changes in wave approach direction could affect reef island shoreline orientation. We compare model results to historical and geologic change for different case studies on the Marshall Islands. This simplified modeling approach, focusing on boundary dynamics and mass fluxes, provides a quantitative tool to predict the response of reef island environments to climate change.

Biomimetric sentinel reef structures for optical sensing and communications

Science.gov (United States)

Fries, David; Hutcheson, Tim; Josef, Noam; Millie, David; Tate, Connor

2017-05-01

Traditional artificial reef structures are designed with uniform cellular architectures and topologies and do not mimic natural reef forms. Strings and ropes are a proven, common fisheries and mariculture construction element throughout the world and using them as artificial reef scaffolding can enable a diversity of ocean sensing, communications systems including the goal of sentinel reefs. The architecture and packaging of electronics is key to enabling such structures and systems. The distributed sensor reef concept leads toward a demonstrable science-engineering-informed framework for 3D smart habitat designs critical to stock fish development and coastal monitoring and protection. These `nature-inspired' reef infrastructures, can enable novel instrumented `reef observatories' capable of collecting real-time ecosystem data. Embedding lighting and electronic elements into artificial reef systems are the first systems conceptualized. This approach of bringing spatial light to the underwater world for optical sensing, communication and even a new breed of underwater robotic vehicle is an interdisciplinary research activity which integrates principles of electronic packaging, and ocean technology with art/design.

No Reef Is an Island: Integrating Coral Reef Connectivity Data into the Design of Regional-Scale Marine Protected Area Networks.

Science.gov (United States)

Schill, Steven R; Raber, George T; Roberts, Jason J; Treml, Eric A; Brenner, Jorge; Halpin, Patrick N

2015-01-01

We integrated coral reef connectivity data for the Caribbean and Gulf of Mexico into a conservation decision-making framework for designing a regional scale marine protected area (MPA) network that provides insight into ecological and political contexts. We used an ocean circulation model and regional coral reef data to simulate eight spawning events from 2008-2011, applying a maximum 30-day pelagic larval duration and 20% mortality rate. Coral larval dispersal patterns were analyzed between coral reefs across jurisdictional marine zones to identify spatial relationships between larval sources and destinations within countries and territories across the region. We applied our results in Marxan, a conservation planning software tool, to identify a regional coral reef MPA network design that meets conservation goals, minimizes underlying threats, and maintains coral reef connectivity. Our results suggest that approximately 77% of coral reefs identified as having a high regional connectivity value are not included in the existing MPA network. This research is unique because we quantify and report coral larval connectivity data by marine ecoregions and Exclusive Economic Zones (EZZ) and use this information to identify gaps in the current Caribbean-wide MPA network by integrating asymmetric connectivity information in Marxan to design a regional MPA network that includes important reef network connections. The identification of important reef connectivity metrics guides the selection of priority conservation areas and supports resilience at the whole system level into the future.

No Reef Is an Island: Integrating Coral Reef Connectivity Data into the Design of Regional-Scale Marine Protected Area Networks.

Directory of Open Access Journals (Sweden)

Steven R Schill

Full Text Available We integrated coral reef connectivity data for the Caribbean and Gulf of Mexico into a conservation decision-making framework for designing a regional scale marine protected area (MPA network that provides insight into ecological and political contexts. We used an ocean circulation model and regional coral reef data to simulate eight spawning events from 2008-2011, applying a maximum 30-day pelagic larval duration and 20% mortality rate. Coral larval dispersal patterns were analyzed between coral reefs across jurisdictional marine zones to identify spatial relationships between larval sources and destinations within countries and territories across the region. We applied our results in Marxan, a conservation planning software tool, to identify a regional coral reef MPA network design that meets conservation goals, minimizes underlying threats, and maintains coral reef connectivity. Our results suggest that approximately 77% of coral reefs identified as having a high regional connectivity value are not included in the existing MPA network. This research is unique because we quantify and report coral larval connectivity data by marine ecoregions and Exclusive Economic Zones (EZZ and use this information to identify gaps in the current Caribbean-wide MPA network by integrating asymmetric connectivity information in Marxan to design a regional MPA network that includes important reef network connections. The identification of important reef connectivity metrics guides the selection of priority conservation areas and supports resilience at the whole system level into the future.

78 FR 67128 - Coral Reef Conservation Program; Meeting

Science.gov (United States)

2013-11-08

... DEPARTMENT OF COMMERCE National Oceanic and Atmospheric Administration Coral Reef Conservation Program; Meeting AGENCY: Coral Reef Conservation Program, Office of Ocean and Coastal Resource Management... meeting of the U.S. Coral Reef Task Force (USCRTF). The meeting will be held in Christiansted, U.S. Virgin...

Status of coral reefs of India

Digital Repository Service at National Institute of Oceanography (India)

Muley, E.V.; Venkataraman, K.; Alfred, J.R.B.; Wafar, M.V.M.

and economic significance of coral reefs and the threat perceptions, Government of India has initiated measures for their intensive conservation and management. Present paper deals with ecological status of coral reefs in the country and various national...

Biology of corals and coral reefs

Digital Repository Service at National Institute of Oceanography (India)

Rajkumar, R.; Parulekar, A.H.

on the systematic position is presented. The general structure is depicted with illustrations. Physiology part is updated to current knowledge on reproduction, nutrition and excretion of corals. The coral reefs section begins with status of world reefs...

Contribution to origin of the reefs in northeastern

International Nuclear Information System (INIS)

Nobrega Coutinho, P. da; Farias, C.C.

1979-01-01

Several reef lines parallel to the seashore are encountered on the heaches of north east Brazil, composing one of the most characteristic morphological phenomena of the region. The textural and mineralogical composition of the reefs is very similar to the sediments met in the submarine beach. The initial comentation seems to take place beach. X-ray diffraction analyses showed that the cement of the first reef line of the intertidal zone is constituited of 60% aragonite and of 40% magnesium calcite with approximately 15-18 mol. %MgCO 3 in the calcite. The cement of the second reef line in the submarine beach is made up of solely calcite with only 3 mol. %MgCO 3 . This proportion becomes even smaller in the cement in the reefs beneath the sand bank. The cement of these reefs is a result of the dissolution and precipitation of organic fragments present in the submarine beach sediments, especial Halimeda. The composition of these fragments appeared to be identical to the reefs of the intertidal zone. The magnesium calcite is mainly a result to the alteration of the aragonite, being the marine inorganic precipitation as a secondary process. (author) [pt

Watershed processes from ridge to reef: consequences of feral ungulates for coral reef and effects of watershed management

Science.gov (United States)

Gordon Tribble; Jonathan Stock; Jim Jacobi

2016-01-01

Molokai’s south shore has some of Hawaii’s most extensive and best-developed coral reefs. Historic terrigenous sedimentation appears to have impacted coral growth along several miles of fringing reef. The land upslope of the reef consists of small watersheds with streams that flow intermittently to the ocean. A USGS gage at the outlet of one of the most impacted...

Coral reef ecosystem

Digital Repository Service at National Institute of Oceanography (India)

Wafar, M.V.M.; Wafar, S.

), on submerged banks like Gave shani bank (13°24'N; 73°45'E) (Nair and Qasim 1978) andSidere~ko Bank (13°43.5' N; 73°42'E) (Rao 1972) and as stray individual units off Visakhapatnam (Bakus, G. personal communication) and Pondicherry (Ramesh, A. personal... communication). Fossil reefs, drowned as a result of the Holocene sea level rise, occur at 92, 85, 75 and 55 m depth along .. ~ !! ":2 0. ~ Figure 3.1 Graphical Representation of the SO-Box Model of a Caribbean Coral Reef Key: 1. Benthic producers. 2. Detritus...

Identification of Coral Reefs in Mamburit Waters, Sumenep Regency

OpenAIRE

Sawiya, Sawiya; Mahmudi, Mohammad; Guntur, Guntur

2014-01-01

This research was conducted in September to October 2013 in Mamburit Waters, Sumenep Regency. This study was aimed to assess the percentage of coral reefs and acknowkedge the type of the coral reefs. Coral reefs was observed with the Line Intercept (LIT) method laid parallel to the coastline in the depth of 3 m and 10 m in windward and leeward area. Total of 59.88% coral reefs lived in leeward area in 3 m depth includes in good category and the percentage of dead coral reefs and other fauna f...

Hypoxia tolerance in coral-reef triggerfishes (Balistidae)

Science.gov (United States)

Wong, Corrie C.; Drazen, Jeffrey C.; Callan, Chatham K.; Korsmeyer, Keith E.

2018-03-01

Despite high rates of photosynthetic oxygen production during the day, the warm waters of coral reefs are susceptible to hypoxia at night due to elevated respiration rates at higher temperatures that also reduce the solubility of oxygen. Hypoxia may be a challenge for coral-reef fish that hide in the reef to avoid predators at night. Triggerfishes (Balistidae) are found in a variety of reef habitats, but they also are known to find refuge in reef crevices and holes at night, which may expose them to hypoxic conditions. The critical oxygen tension ( P crit) was determined as the point below which oxygen uptake could not be maintained to support standard metabolic rate (SMR) for five species of triggerfish. The triggerfishes exhibited similar levels of hypoxia tolerance as other coral-reef and coastal marine fishes that encounter low oxygen levels in their environment. Two species, Rhinecanthus rectangulus and R. aculeatus, had the lowest P crit ( 3.0 kPa O2), comparable to the most hypoxia-tolerant obligate coral-dwelling gobies, while Odonus niger and Sufflamen bursa were moderately tolerant to hypoxia ( P crit 4.5 kPa), and Xanthichthys auromarginatus was intermediate ( P crit 3.7 kPa). These differences in P crit were not due to differences in oxygen demand, as all the species had a similar SMR once mass differences were taken into account. The results suggest that triggerfish species are adapted for different levels of hypoxia exposure during nocturnal sheltering within the reef.

National Coral Reef Monitoring Program: Assessing and Monitoring Cryptic Reef Diversity of Colonizing Marine Invertebrates using Autonomous Reef Monitoring Structure (ARMS) Deployed at Coral Reef Sites across the Marianas Archipelago from 2011-04-07 to 2014-05-04 (NCEI Accession 0162461)

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Autonomous Reef Monitoring Structures (ARMS) are used to assess and monitor cryptic reef diversity of colonizing marine invertebrates in the Hawaiian and Mariana...

National Coral Reef Monitoring Program: Assessing and Monitoring Cryptic Reef Diversity of Colonizing Marine Invertebrates using Autonomous Reef Monitoring Structure (ARMS) Deployed at Coral Reef Sites across Wake Island from 2011-03-23 to 2014-03-19 (NCEI Accession 0162467)

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Autonomous Reef Monitoring Structures (ARMS) are used to assess and monitor cryptic reef diversity of colonizing marine invertebrates in the Hawaiian and Mariana...

National Coral Reef Monitoring Program: Assessing and Monitoring Cryptic Reef Diversity of Colonizing Marine Invertebrates using Autonomous Reef Monitoring Structure (ARMS) Deployed at Coral Reef Sites across the Hawaiian Archipelago from 2013-08-03 to 2016-09-24 (NCEI Accession 0162465)

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Autonomous Reef Monitoring Structures (ARMS) are used to assess and monitor cryptic reef diversity of colonizing marine invertebrates in the Hawaiian and Mariana...

National Coral Reef Monitoring Program: Assessing and Monitoring Cryptic Reef Diversity of Colonizing Marine Invertebrates using Autonomous Reef Monitoring Structure (ARMS) Deployed at Coral Reef Sites across the Hawaiian Archipelago from 2008-10-07 to 2013-09-13 (NCEI Accession 0162470)

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Autonomous Reef Monitoring Structures (ARMS) are used to assess and monitor cryptic reef diversity of colonizing marine invertebrates in the Hawaiian and Mariana...

National Coral Reef Monitoring Program: Assessing and Monitoring Cryptic Reef Diversity of Colonizing Marine Invertebrates using Autonomous Reef Monitoring Structure (ARMS) Deployed at Coral Reef Sites across American Samoa from 2012-04-03 to 2015-03-26 (NCEI Accession 0162468)

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Autonomous Reef Monitoring Structures (ARMS) are used to assess and monitor cryptic reef diversity of colonizing marine invertebrates in the Hawaiian and Mariana...

The coral reef of South Moloka'i, Hawai'i - Portrait of a sediment-threatened fringing reef

Science.gov (United States)

Field, Michael E.; Cochran, Susan A.; Logan, Joshua; Storlazzi, Curt D.

2008-01-01

Moloka‘i, with the most extensive coral reef in the main Hawaiian Islands, is especially sacred to Hina, the Goddess of the Moon. As Hinaalo, she is the Mother of the Hawaiian people; as Hinapuku‘a, she is the Goddess of Fishermen; and in the form Hina‘opuhalako‘a, she is the Goddess who gave birth to coral, coral reefs, and all spiny marine organisms. Interdependence between the reef’s living resources, the people, and their cosmology was the basis for management of Moloka‘i’s coastal waters for over a thousand years.The ancient residents of Moloka‘i built the greatest concentration of fishponds known anywhere, but their mastery of mariculture, something needed now more than ever, was lost after near genocide from exotic Western diseases. Subsequent destruction of the native vegetation for exotic cattle, goats, pigs, sugar cane, and pineapple caused soil erosion and sedimentation on the reef flat. This masterful volume clearly documents that soil washing into the sea is the major threat to the reef today. Abandoned fishponds, choked with sediment, now act as barriers and mud traps, making damage to corals less than it would otherwise would have been.The role of mud and freshwater from land in preventing coral reef growth, clearly articulated in Charles Darwin’s first book, The Structure and Distribution of Coral Reefs, is the major theme of this book. All around the tropics, coral reefs have died from huge increases in terrestrial sedimentation that resulted from destruction of hillside forests for cash-crop agriculture and pastures in the colonial era, especially in Latin America, Asia, and the islands of the Caribbean and Indo-Pacific. It is obvious that one cannot manage the coastal zone as a unit separate from the watersheds that drain into it. Yet there has been surprisingly little comprehensive scientific study of these impacts.In this landmark volume, U.S. Geological Survey researchers and their colleagues have developed and applied a

State of the coralline reefs

International Nuclear Information System (INIS)

Garzon Ferreira, Jaime; Rodriguez Ramirez, Alberto; Bejarano Chavarro, Sonia; Navas Camacho, Raul; Reyes Nivia, Catalina

2002-01-01

A diagnosis is made based primarily on the data obtained inside the national system of monitoring of coralline reefs in Colombia, under the coordination of the INVEMAR and with the support of several institutions. The paper does a diagnostic of the covering of the reef substrate, bleaching and coralline illnesses, wealth and abundance of fishes among other topics

Ecological Processes and Contemporary Coral Reef Management

Directory of Open Access Journals (Sweden)

Angela Dikou

2010-05-01

Full Text Available Top-down controls of complex foodwebs maintain the balance among the critical groups of corals, algae, and herbivores, thus allowing the persistence of corals reefs as three-dimensional, biogenic structures with high biodiversity, heterogeneity, resistance, resilience and connectivity, and the delivery of essential goods and services to societies. On contemporary reefs world-wide, however, top-down controls have been weakened due to reduction in herbivory levels (overfishing or disease outbreak while bottom-up controls have increased due to water quality degradation (increase in sediment and nutrient load and climate forcing (seawater warming and acidification leading to algal-dominated alternate benthic states of coral reefs, which are indicative of a trajectory towards ecological extinction. Management to reverse common trajectories of degradation for coral reefs necessitates a shift from optimization in marine resource use and conservation towards building socio-economic resilience into coral reef systems while attending to the most manageable human impacts (fishing and water quality and the global-scale causes (climate change.

Artificial Reefs

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — An artificial reef is a human-made underwater structure, typically built to promote marine life in areas with a generally featureless bottom, control erosion, block...

Influence of landscape structure on reef fish assemblages

Science.gov (United States)

Grober-Dunsmore, R.; Frazer, T.K.; Beets, J.P.; Lindberg, W.J.; Zwick, P.; Funicelli, N.A.

2008-01-01

Management of tropical marine environments calls for interdisciplinary studies and innovative methodologies that consider processes occurring over broad spatial scales. We investigated relationships between landscape structure and reef fish assemblage structure in the US Virgin Islands. Measures of landscape structure were transformed into a reduced set of composite indices using principal component analyses (PCA) to synthesize data on the spatial patterning of the landscape structure of the study reefs. However, composite indices (e.g., habitat diversity) were not particularly informative for predicting reef fish assemblage structure. Rather, relationships were interpreted more easily when functional groups of fishes were related to individual habitat features. In particular, multiple reef fish parameters were strongly associated with reef context. Fishes responded to benthic habitat structure at multiple spatial scales, with various groups of fishes each correlated to a unique suite of variables. Accordingly, future experiments should be designed to test functional relationships based on the ecology of the organisms of interest. Our study demonstrates that landscape-scale habitat features influence reef fish communities, illustrating promise in applying a landscape ecology approach to better understand factors that structure coral reef ecosystems. Furthermore, our findings may prove useful in design of spatially-based conservation approaches such as marine protected areas (MPAs), because landscape-scale metrics may serve as proxies for areas with high species diversity and abundance within the coral reef landscape. ?? 2007 Springer Science+Business Media B.V.

Coral reefs as drivers of cladogenesis: expanding coral reefs, cryptic extinction events, and the development of biodiversity hotspots.

Science.gov (United States)

Cowman, P F; Bellwood, D R

2011-12-01

Diversification rates within four conspicuous coral reef fish families (Labridae, Chaetodontidae, Pomacentridae and Apogonidae) were estimated using Bayesian inference. Lineage through time plots revealed a possible late Eocene/early Oligocene cryptic extinction event coinciding with the collapse of the ancestral Tethyan/Arabian hotspot. Rates of diversification analysis revealed elevated cladogenesis in all families in the Oligocene/Miocene. Throughout the Miocene, lineages with a high percentage of coral reef-associated taxa display significantly higher net diversification rates than expected. The development of a complex mosaic of reef habitats in the Indo-Australian Archipelago (IAA) during the Oligocene/Miocene appears to have been a significant driver of cladogenesis. Patterns of diversification suggest that coral reefs acted as a refuge from high extinction, as reef taxa are able to sustain diversification at high extinction rates. The IAA appears to support both cladogenesis and survival in associated lineages, laying the foundation for the recent IAA marine biodiversity hotspot. © 2011 The Authors. Journal of Evolutionary Biology © 2011 European Society For Evolutionary Biology.

Can mesophotic reefs replenish shallow reefs? Reduced coral reproductive performance casts a doubt.

Science.gov (United States)

Shlesinger, Tom; Grinblat, Mila; Rapuano, Hanna; Amit, Tal; Loya, Yossi

2018-02-01

Mesophotic coral ecosystems (i.e., deep coral reefs at 30-120 m depth) appear to be thriving while many shallow reefs in the world are declining. Amid efforts to understand and manage their decline, it was suggested that mesophotic reefs might serve as natural refuges and a possible source of propagules for the shallow reefs. However, our knowledge of how reproductive performance of corals alters with depth is sparse. Here, we present a comprehensive study of the reproductive phenology, fecundity, and abundance of seven reef-building conspecific corals in shallow and mesophotic habitats. Significant differences were found in the synchrony and timing of gametogenesis and spawning between shallow and mesophotic coral populations. Thus, mesophotic populations exhibited delayed or protracted spawning events, which led to spawning of the mesophotic colonies in large proportions at times where the shallow ones had long been depleted of reproductive material. All species investigated demonstrated a substantial reduction in fecundity and/or oocyte sizes at mesophotic depths (40-60 m). Two species (Seriatopora hystrix and Galaxea fascicularis) displayed a reduction in both fecundity and oocyte size at mesophotic depths. Turbinaria reniformis had only reduced fecundity and Acropora squarrosa and Acropora valida only reduced oocyte size. In Montipora verrucosa, reduced fecundity was found during one annual reproductive season while, in the following year, only reduced oocyte size was found. In contrast, reduced oocyte size in mesophotic populations of Acropora squarrosa was consistent along three studied years. One species, Acropora pharaonis, was found to be infertile at mesophotic depths along two studied years. This indicates that reproductive performance decreases with depth; and that although some species are capable of reproducing at mesophotic depths, their contribution to the replenishment of shallow reefs may be inconsequential. Reduced reproductive performance

Linking social and ecological systems to sustain coral reef fisheries.

Science.gov (United States)

Cinner, Joshua E; McClanahan, Timothy R; Daw, Tim M; Graham, Nicholas A J; Maina, Joseph; Wilson, Shaun K; Hughes, Terence P

2009-02-10

The ecosystem goods and services provided by coral reefs are critical to the social and economic welfare of hundreds of millions of people, overwhelmingly in developing countries [1]. Widespread reef degradation is severely eroding these goods and services, but the socioeconomic factors shaping the ways that societies use coral reefs are poorly understood [2]. We examine relationships between human population density, a multidimensional index of socioeconomic development, reef complexity, and the condition of coral reef fish populations in five countries across the Indian Ocean. In fished sites, fish biomass was negatively related to human population density, but it was best explained by reef complexity and a U-shaped relationship with socioeconomic development. The biomass of reef fishes was four times lower at locations with intermediate levels of economic development than at locations with both low and high development. In contrast, average biomass inside fishery closures was three times higher than in fished sites and was not associated with socioeconomic development. Sustaining coral reef fisheries requires an integrated approach that uses tools such as protected areas to quickly build reef resources while also building capacities and capital in societies over longer time frames to address the complex underlying causes of reef degradation.

Sensitivity of calcification to thermal stress varies among genera of massive reef-building corals.

Directory of Open Access Journals (Sweden)

Juan P Carricart-Ganivet

Full Text Available Reductions in calcification in reef-building corals occur when thermal conditions are suboptimal, but it is unclear how they vary between genera in response to the same thermal stress event. Using densitometry techniques, we investigate reductions in the calcification rate of massive Porites spp. from the Great Barrier Reef (GBR, and P. astreoides, Montastraea faveolata, and M. franksi from the Mesoamerican Barrier Reef (MBR, and correlate them to thermal stress associated with ocean warming. Results show that Porites spp. are more sensitive to increasing temperature than Montastraea, with calcification rates decreasing by 0.40 g cm(-2 year(-1 in Porites spp. and 0.12 g cm(-2 year(-1 in Montastraea spp. for each 1°C increase. Under similar warming trends, the predicted calcification rates at 2100 are close to zero in Porites spp. and reduced by 40% in Montastraea spp. However, these predictions do not account for ocean acidification. Although yearly mean aragonite saturation (Ω(ar at MBR sites has recently decreased, only P. astreoides at Chinchorro showed a reduction in calcification. In corals at the other sites calcification did not change, indicating there was no widespread effect of Ω(ar changes on coral calcification rate in the MBR. Even in the absence of ocean acidification, differential reductions in calcification between Porites spp. and Montastraea spp. associated with warming might be expected to have significant ecological repercussions. For instance, Porites spp. invest increased calcification in extension, and under warming scenarios it may reduce their ability to compete for space. As a consequence, shifts in taxonomic composition would be expected in Indo-Pacific reefs with uncertain repercussions for biodiversity. By contrast, Montastraea spp. use their increased calcification resources to construct denser skeletons. Reductions in calcification would therefore make them more susceptible to both physical and biological

Oyster Reef Communities in the Chesapeake Bay: A Brief Primer. VORTEX: Virginia's Oyster Reef Teaching EXperience.

Science.gov (United States)

Harding, Juliana M.; Mann, Roger; Clark, Vicki P.

This document introduces Virginia's Oyster Reef Teaching EXperience (VORTEX), which is an interdisciplinary program focusing on the importance of oyster reef communities in the Chesapeake Bay ecosystem. The VORTEX program uses field and laboratory experience supported by multimedia instruction. This document presents an overview on the biology of…

Determining the extent and characterizing coral reef habitats of the northern latitudes of the Florida Reef Tract (Martin County).

Science.gov (United States)

Walker, Brian K; Gilliam, David S

2013-01-01

Climate change has recently been implicated in poleward shifts of many tropical species including corals; thus attention focused on higher-latitude coral communities is warranted to investigate possible range expansions and ecosystem shifts due to global warming. As the northern extension of the Florida Reef Tract (FRT), the third-largest barrier reef ecosystem in the world, southeast Florida (25-27° N latitude) is a prime region to study such effects. Most of the shallow-water FRT benthic habitats have been mapped, however minimal data and limited knowledge exist about the coral reef communities of its northernmost reaches off Martin County. First benthic habitat mapping was conducted using newly acquired high resolution LIDAR bathymetry and aerial photography where possible to map the spatial extent of coral reef habitats. Quantitative data were collected to characterize benthic cover and stony coral demographics and a comprehensive accuracy assessment was performed. The data were then analyzed in a habitat biogeography context to determine if a new coral reef ecosystem region designation was warranted. Of the 374 km(2) seafloor mapped, 95.2% was Sand, 4.1% was Coral Reef and Colonized Pavement, and 0.7% was Other Delineations. Map accuracy assessment yielded an overall accuracy of 94.9% once adjusted for known map marginal proportions. Cluster analysis of cross-shelf habitat type and widths indicated that the benthic habitats were different than those further south and warranted designation of a new coral reef ecosystem region. Unlike the FRT further south, coral communities were dominated by cold-water tolerant species and LIDAR morphology indicated no evidence of historic reef growth during warmer climates. Present-day hydrographic conditions may be inhibiting poleward expansion of coral communities along Florida. This study provides new information on the benthic community composition of the northern FRT, serving as a baseline for future community shift and

Scientific Frontiers in the Management of Coral Reefs

Directory of Open Access Journals (Sweden)

Shankar eAswani

2015-07-01

Full Text Available Coral reefs are subjected globally to a variety of natural and anthropogenic stressors that often act synergistically. Today, reversing ongoing and future coral reef degradation presents significant challenges and countering this negative trend will take considerable efforts and investments. Scientific knowledge can inform and guide the requisite decision-making process and offer practical solutions to the problem of protection as the effects of climate change exacerbate. However, implementation of solutions presently lags far behind the pace required to reverse global declines, and there is a need for an urgent and significant step-up in the extent and range of strategies being implemented. In this paper, we consider scientific frontiers in natural and social science research that can help build stronger support for reef management and improve the efficacy of interventions. We cover various areas including: (1 enhancing the case for reef conservation and management, (2 dealing with local stressors on reefs, (3 addressing global climate change impacts, (4 and reviewing various approaches to the governance of coral reefs. In sum, we consider scientific frontiers in natural and social science that will require further attention in coming years as managers’ work towards building stronger support for reef management and improve the efficacy of local interventions.

Coral Reefs: A Gallery Program, Grades 7-12.

Science.gov (United States)

National Aquarium in Baltimore, MD. Dept. of Education.

Gallery classes at the National Aquarium in Baltimore give the opportunity to study specific aquarium exhibits which demonstrate entire natural habitats. The coral reef gallery class features the gigantic western Atlantic coral reef (325,000 gallons) with over 1,000 fish. The exhibit simulates a typical Caribbean coral reef and nearby sandy…

Recent and relict topography of Boo Bee patch reef, Belize

Science.gov (United States)

Halley, R.B.; Shinn, E.A.; Hudson, J.H.; Lidz, B.; Taylor, D.L.

1977-01-01

Five core borings were taken on and around Boo Bee Patch Reef to better understand the origin of such shelf lagoon reefs. The cores reveal 4 stages of development: (1) subaerial exposure of a Pleistocene "high" having about 8 meters of relief, possibly a Pleistocene patch reef; (2) deposition of peat and impermeable terrigenous clay 3 meters thick around the high; (3) initiation of carbonate sediment production by corals and algae on the remaining 5 meters of hard Pleistocene topography and carbonate mud on the surrounding terrigenous clay; and (4) accelerated organic accumulation on the patch reef. Estimates of patch reef sedimentation rates (1.6 m/1000 years) are 3 to 4 times greater than off-reef sedimentation rates (0.4-0.5 m/1000 years). During periods of Pleistocene sedimentation on the Belize shelf, lagoon patch reefs may have grown above one another, stacking up to form reef accumulation of considerable thickness.

National Coral Reef Monitoring Program: Coral Reef Fish collected in Fl Keys Reef Tract (2014)

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Divers conducted reef visual census (RVC) fish surveys and habitat assessments at 433 sites in the Florida Keys, 436 sites in the Dry Tortugas and 320 sites in the...

In situ coral reef oxygen metabolism: an eddy correlation study.

Directory of Open Access Journals (Sweden)

Matthew H Long

Full Text Available Quantitative studies of coral reefs are challenged by the three-dimensional hard structure of reefs and the high spatial variability and temporal dynamics of their metabolism. We used the non-invasive eddy correlation technique to examine respiration and photosynthesis rates, through O2 fluxes, from reef crests and reef slopes in the Florida Keys, USA. We assessed how the photosynthesis and respiration of different reef habitats is controlled by light and hydrodynamics. Numerous fluxes (over a 0.25 h period were as high as 4500 mmol O2 m(-2 d(-1, which can only be explained by efficient light utilization by the phototrophic community and the complex canopy structure of the reef, having a many-fold larger surface area than its horizontal projection. Over diel cycles, the reef crest was net autotrophic, whereas on the reef slope oxygen production and respiration were balanced. The autotrophic nature of the shallow reef crests implies that the export of organics is an important source of primary production for the larger area. Net oxygen production on the reef crest was proportional to the light intensity, up to 1750 µmol photons m(-2 s(-1 and decreased thereafter as respiration was stimulated by high current velocities coincident with peak light levels. Nighttime respiration rates were also stimulated by the current velocity, through enhanced ventilation of the porous framework of the reef. Respiration rates were the highest directly after sunset, and then decreased during the night suggesting that highly labile photosynthates produced during the day fueled early-night respiration. The reef framework was also important to the acquisition of nutrients as the ambient nitrogen stock in the water had sufficient capacity to support these high production rates across the entire reef width. These direct measurements of complex reefs systems yielded high metabolic rates and dynamics that can only be determined through in situ, high temporal resolution

Introduction of geospatial perspective to the ecology of fish-habitat relationships in Indonesian coral reefs: A remote sensing approach

Science.gov (United States)

Sawayama, Shuhei; Nurdin, Nurjannah; Akbar AS, Muhammad; Sakamoto, Shingo X.; Komatsu, Teruhisa

2015-06-01

Coral reef ecosystems worldwide are now being harmed by various stresses accompanying the degradation of fish habitats and thus knowledge of fish-habitat relationships is urgently required. Because conventional research methods were not practical for this purpose due to the lack of a geospatial perspective, we attempted to develop a research method integrating visual fish observation with a seabed habitat map and to expand knowledge to a two-dimensional scale. WorldView-2 satellite imagery of Spermonde Archipelago, Indonesia obtained in September 2012 was analyzed and classified into four typical substrates: live coral, dead coral, seagrass and sand. Overall classification accuracy of this map was 81.3% and considered precise enough for subsequent analyses. Three sub-areas (CC: continuous coral reef, BC: boundary of coral reef and FC: few live coral zone) around reef slopes were extracted from the map. Visual transect surveys for several fish species were conducted within each sub-area in June 2013. As a result, Mean density (Ind. / 300 m2) of Chaetodon octofasciatus, known as an obligate feeder of corals, was significantly higher at BC than at the others (p < 0.05), implying that this species' density is strongly influenced by spatial configuration of its habitat, like the "edge effect." This indicates that future conservation procedures for coral reef fishes should consider not only coral cover but also its spatial configuration. The present study also indicates that the introduction of a geospatial perspective derived from remote sensing has great potential to progress conventional ecological studies on coral reef fishes.

Nitrification in reef corals

Digital Repository Service at National Institute of Oceanography (India)

Wafar, M.V.M.; Wafar, S.; David, J.J.

. An estimate of the density of nitrifying bacteria on living corals can be made by comparing the nitrifying rates of bacterial cells and the rate of production of NO,-. Kaplan (1983) summarized the growth con- stants of marine nitrifying bacteria... Reef Con=. 3: 395-399. -, C. R. WILKINSON, V. p. VICENTE, J. M. MORELL, AND E. OTERO. 1988. Nitrate release by Carib- bean reef sponges. Limnol. Oceanogr. 33: 114- 120. CROSSLAND, C. J., AND D. J. BARNES. 1983. Dissolved nutrients and organic...

Coral Reef Functioning Along a Cross‐shelf Environmental Gradient: Abiotic and Biotic Drivers of Coral Reef Growth in the Red Sea

KAUST Repository

Roik, Anna

2016-06-01

Despite high temperature and salinity conditions that challenge reef growth in other oceans, the Red Sea maintains amongst the most biodiverse and productive coral reefs worldwide. It is therefore an important region for the exploration of coral reef functioning, and expected to contribute valuable insights towards the understanding of coral reefs in challenging environments. This dissertation assessed the baseline variability of in situ abiotic conditions (temperature, dissolved oxygen, pH, and total alkalinity, among others) in the central Red Sea and highlights these environmental regimes in a global context. Further, focus was directed on biotic factors (biofilm community dynamics, calcification and bioerosion), which underlie reef growth processes and are crucial for maintaining coral reef functioning and ecosystem services. Using full‐year data from an environmental cross‐shelf gradient, the dynamic interplay of abiotic and biotic factors was investigated. In situ observations demonstrate that central Red Sea coral reefs were highly variable on spatial, seasonal, and diel scales, and exhibited comparably high temperature, high salinity, and low dissolved oxygen levels, which on the one hand reflect future ocean predictions. Under these conditions epilithic bacterial and algal assemblages were mainly driven by variables (i.e., temperature, salinity, dissolved oxygen) which are predicted to change strongly in the progression of global climate change, implying an influential bottom up effect on reef‐building communities. On the other hand, measured alkalinity and other carbonate chemistry value were close to the estimates of preindustrial global ocean surface water and thus in favor of reef growth processes. Despite this beneficial carbonate chemistry, calcification and carbonate budgets in the reefs were not higher than in other coral reef regions. In this regard, seasonal calcification patterns suggest that summer temperatures may be exceeding the optima

Patterns of coral species richness and reef connectivity in Malaysia

NARCIS (Netherlands)

Waheed, Z.

2016-01-01

Much remains to be discovered about the biodiversity of coral reefs in Malaysia, making this area a priority for coral reef research. This thesis aims to provide insights into the patterns of reef coral species richness and the degree of reef connectivity across Malaysia. For the species richness

Coral reef connectivity within the Western Gulf of Mexico

Science.gov (United States)

Salas-Monreal, David; Marin-Hernandez, Mark; Salas-Perez, Jose de Jesus; Salas-de-Leon, David Alberto; Monreal-Gomez, Maria Adela; Perez-España, Horacio

2018-03-01

The yearlong monthly mean satellite data of the geostrophic velocities, the sea surface temperature and the chlorophyll-a values were used to elucidate any possible pathway among the different coral reef systems of the Western Gulf of Mexico (WGM). The geostrophic current velocities suggested different pathways connecting the coral reef areas. The typical coastal alongshore pathway constricted to the continental shelf, and two open ocean pathway, the first connecting the Campeche Reef System (CRS) with the Veracruz (VRS) and Tuxpan-Lobos Reef Systems (TLRS), and the second pathway connecting the Tuxpan-Lobos Reef System with the Flower Garden Reef System (FGRS). According to the pathways there should be more larvae transport from the southern Gulf of Mexico reef systems toward the FGRS than the other way. The connection from the southern Gulf of Mexico toward the FGRS took place during January, May, July, August and September (2015), while the connection from the FGRS toward the southern Gulf of Mexico reef system took place during January and February (2015), this was also suggested via model outputs. The density radio (R) was used as a first approximation to elucidate the influence of the freshwater continental discharges within the continental shelf. All coral reef areas were located where the Chlorophyll-a monthly mean values had values bellow 1 mg m- 2 with a density radio between 0 and 1, i.e. under the influence of continental discharges.

Status and conservation of coral reefs in Costa Rica.

Science.gov (United States)

Cortés, Jorge; Jiménez, Carlos E; Fonseca, Ana C; Alvarado, Juan José

2010-05-01

Costa Rica has coral communities and reefs on the Caribbean coast and on the Pacific along the coast and off-shore islands. The Southern section of the Caribbean coast has fringing and patch reefs, carbonate banks, and an incipient algal ridge. The Pacific coast has coral communities, reefs and isolated coral colonies. Coral reefs have been seriously impacted in the last 30 years, mainly by sediments (Caribbean coast and some Pacific reefs) and by El Niño warming events (both coasts). Monitoring is being carried out at three sites on each coast. Both coasts suffered significant reductions in live coral cover in the 1980's, but coral cover is now increasing in most sites. The government of Costa Rica is aware of the importance of coral reefs and marine environments in general, and in recent years decrees have been implemented (or are in the process of approval) to protect them, but limited resources endanger their proper management and conservation, including proper outreach to reef users and the general public.

Coral Reefs Under Rapid Climate Change and Ocean Acidification

Science.gov (United States)

Hoegh-Guldberg, O.; Mumby, P. J.; Hooten, A. J.; Steneck, R. S.; Greenfield, P.; Gomez, E.; Harvell, C. D.; Sale, P. F.; Edwards, A. J.; Caldeira, K.; Knowlton, N.; Eakin, C. M.; Iglesias-Prieto, R.; Muthiga, N.; Bradbury, R. H.; Dubi, A.; Hatziolos, M. E.

2007-12-01

Atmospheric carbon dioxide concentration is expected to exceed 500 parts per million and global temperatures to rise by at least 2°C by 2050 to 2100, values that significantly exceed those of at least the past 420,000 years during which most extant marine organisms evolved. Under conditions expected in the 21st century, global warming and ocean acidification will compromise carbonate accretion, with corals becoming increasingly rare on reef systems. The result will be less diverse reef communities and carbonate reef structures that fail to be maintained. Climate change also exacerbates local stresses from declining water quality and overexploitation of key species, driving reefs increasingly toward the tipping point for functional collapse. This review presents future scenarios for coral reefs that predict increasingly serious consequences for reef-associated fisheries, tourism, coastal protection, and people. As the International Year of the Reef 2008 begins, scaled-up management intervention and decisive action on global emissions are required if the loss of coral-dominated ecosystems is to be avoided.

Radiography of X-ray in coral reefs

International Nuclear Information System (INIS)

Djoli Soembogo

2016-01-01

The application of X-ray radiography has been developed and it is already widely used in metal materials such as metal steel and carbon steel. This radiography using a source of radiation from X-ray machines. This research attempts to use the application of digital radiography X-ray source and use scanner Epson V700 positive films media for digitization results of conventional radiographic films on coral reefs. It has been testing radiography using Fuji film 100 to get the contrast medium, the sensitivity of the medium and image quality is good, Single Wall Single Image method , and using the media scanner films positive and X-ray sources, observation parameter are density radiographic film and the defect shape. Radiography uses Fuji film 100 to obtain a good contrast medium, good medium sensitivity and good quality image. Radiography of X-ray on coral reefs aims to find defects or discontinuities coral reefs such as porosity which would interfere with the determination of the age of the coral reefs. X-ray exposure time is 1 seconds for a thickness of 5.45 mm and 5.60 mm coral reefs by using a high voltage X-ray machine Rigaku of 130 kV. The result of the positive film scanner in the form of digital radiography that allows for the transfer of digital data or digital computerized data storage. The test results of radiographic on coral reefs with Single Wall Single Image method obtained radiographic film density parameter for Fuji film 100 on coral reefs No. 2 are 2.55; 2.53; 2.59 and on coral reefs No. 4 are 2.62; 2.65; 2.66, unsharpness geometric of radiographic results obtained 0.022 mm and 0.023 mm, sensitivity radiography are 1.648% and 1.604%. No defect found of Porosity that is significant. Status is acceptable for Fuji film 100, because the density of the film is in conformity with the standards referred to. Status of coral reefs No. 2 and No. 4 can be accepted, because it has conformed with the standards referred. (author)

Holocene coral patch reef ecology and sedimentary architecture, Northern Belize, Central America

Energy Technology Data Exchange (ETDEWEB)

Mazzullo, S.J.; Anderson-Underwood, K.E.; Burke, C.D.; Bischoff, W.D. (Wichita State Univ., KS (United States))

1992-12-01

Coral patch reefs are major components of Holocene platform carbonate facies systems in tropical and subtropical areas. The biotic composition, growth and relationship to sea level history, and diagenetic attributes of a representative Holocene patch reef ([open quotes]Elmer Reef[close quotes]) in the Mexico Rocks complex in northern Belize are described and compared to those of Holocene patch reefs in southern Belize. Elmer Reef has accumulated in shallow (2.5 m) water over the last 420 yr, under static sea level conditions. Rate of vertical construction is 0.3-0.5 m/100 yr, comparable to that of patch reefs in southern Belize. A pronounced coral zonation exists across Elmer Reef, with Monastrea annularis dominating on its crest and Acropora cervicornis occurring on its windward and leeward flanks. The dominance of Montastrea on Elmer Reef is unlike that of patch reefs in southern Belize, in which this coral assumes only a subordinate role in reef growth relative to that of Acropora palmata. Elmer Reef locally is extensively biodegraded and marine, fibrous aragonite and some bladed high-magnesium calcite cements occur throughout the reef section, partially occluding corallites and interparticle pores in associated sands. Patch reefs in southern Belize have developed as catch-up and keep-up reefs in a transgressive setting. In contrast, the dominant mode of growth of Elmer Reef, and perhaps other patch reefs in Mexico Rocks, appears to be one of lateral rather than vertical accretion. This style of growth occurs in a static sea level setting where there is only limited accommodation space because of the shallowness of the water, and such reefs are referred to as [open quotes]expansion reefs[close quotes]. 39 refs., 8 figs., 2 tabs.

Accretion history and stratigraphy of mid-Holocene coral reefs from Southeast Florida, USA

Science.gov (United States)

Stathakopoulos, A.; Riegl, B. M.; Swart, P. K.

2013-05-01

The southeast Florida shelf is a well-studied coral reef region previously used in studies of late Quaternary sea-level, reef geomorphology, and paleoecology in the sub-tropical Atlantic. Situated on the shelf is the southeast Florida continental reef tract; a ~125 km long Holocene fringing/barrier coral reef complex, composed of three shore-parallel linear reefs ('outer', 'middle', and 'inner' reefs) of varying age. Since few detailed stratigraphic descriptions exist, drill cores were extracted to further understand the composition, character, and radiometric ages of reef material in order to reconstruct the accretion history. Sixteen reef cores from the shallow inner reef were collected along and across the reef axes and were combined with lidar bathymetric data for stratigraphic and geomorphologic analyses. Macroscopic and microscopic (petrographic thin sections) examinations of reef clasts were performed to identify coral and reef infauna species compositions, diagenetic facies, and taphonomic features for interpretation of former reef environments/zonation. The southeast Florida continental reef tract was characterized by dynamic reef terminations, backstepping, and re-initiation in response to post-glacial sea-level rise and flooding of topography suitable for reef initiation and growth. Results suggest that the outer reef accreted from ~10.6-8.0 ka cal BP, the middle reef from at least ~5.8-3.7 ka cal BP, and the inner reef from ~7.8-5.5 ka cal BP. The outer reef is the best-developed reef, followed by the inner reef, while the middle reef apparently has relatively little framework buildup. New data from this study and a lack of significant age overlaps confirm that reef backstepping from the outer to the inner reef occurred within a few hundred years after outer reef termination. This is consistent with temporal and spatial scales reported from backstepped reefs in St. Croix and Puerto Rico. The cause of the backstep is still unknown however some studies

Coral Reefs: An English Compilation of Activities for Middle School Students.

Science.gov (United States)

Walker, Sharon H.; Newton, R. Amanda; Ortiz, Alida

This activity book on coral reefs for middle school students is divided into 10 sections. Section 1 contains the introduction. Section 2 describes what coral reefs are while section 3 describes how coral reefs reproduce and grow. Section 4 discusses where coral reefs are found and section 5 describes life on a coral reef. Section 6 discusses the…

Pacific Reef Assessment and Monitoring Program: Assessing and Monitoring Cryptic Reef Diversity of Colonizing Marine Invertebrates using Autonomous Reef Monitoring Structures (ARMS) Deployed at Coral Reef Sites across the U.S. Pacific from 2008-02-06 to 2012-05-18 (NCEI Accession 0162469)

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — To support a long-term program for sustainable management and conservation of coral reef ecosystems, from 2008, Autonomous Reef Monitoring Structures (ARMS) have...

National Coral Reef Monitoring Program: Assessing and Monitoring Cryptic Reef Diversity of Colonizing Marine Invertebrates using Autonomous Reef Monitoring Structure (ARMS) Deployed at Coral Reef Sites across the Pacific Remote Island Areas from 2012-05-03 to 2015-04-28 (NCEI Accession 0162464)

Data.gov (United States)

National Oceanic and Atmospheric Administration, Department of Commerce — Autonomous Reef Monitoring Structures (ARMS) are used to assess and monitor cryptic reef diversity of colonizing marine invertebrates in the Hawaiian and Mariana...

The DNA of coral reef biodiversity: predicting and protecting genetic diversity of reef assemblages.

Science.gov (United States)

Selkoe, Kimberly A; Gaggiotti, Oscar E; Treml, Eric A; Wren, Johanna L K; Donovan, Mary K; Toonen, Robert J

2016-04-27

Conservation of ecological communities requires deepening our understanding of genetic diversity patterns and drivers at community-wide scales. Here, we use seascape genetic analysis of a diversity metric, allelic richness (AR), for 47 reef species sampled across 13 Hawaiian Islands to empirically demonstrate that large reefs high in coral cover harbour the greatest genetic diversity on average. We found that a species's life history (e.g. depth range and herbivory) mediates response of genetic diversity to seascape drivers in logical ways. Furthermore, a metric of combined multi-species AR showed strong coupling to species richness and habitat area, quality and stability that few species showed individually. We hypothesize that macro-ecological forces and species interactions, by mediating species turnover and occupancy (and thus a site's mean effective population size), influence the aggregate genetic diversity of a site, potentially allowing it to behave as an apparent emergent trait that is shaped by the dominant seascape drivers. The results highlight inherent feedbacks between ecology and genetics, raise concern that genetic resilience of entire reef communities is compromised by factors that reduce coral cover or available habitat, including thermal stress, and provide a foundation for new strategies for monitoring and preserving biodiversity of entire reef ecosystems. © 2016 The Authors.

Extinction vulnerability of coral reef fishes.

Science.gov (United States)

Graham, Nicholas A J; Chabanet, Pascale; Evans, Richard D; Jennings, Simon; Letourneur, Yves; Aaron Macneil, M; McClanahan, Tim R; Ohman, Marcus C; Polunin, Nicholas V C; Wilson, Shaun K

2011-04-01

With rapidly increasing rates of contemporary extinction, predicting extinction vulnerability and identifying how multiple stressors drive non-random species loss have become key challenges in ecology. These assessments are crucial for avoiding the loss of key functional groups that sustain ecosystem processes and services. We developed a novel predictive framework of species extinction vulnerability and applied it to coral reef fishes. Although relatively few coral reef fishes are at risk of global extinction from climate disturbances, a negative convex relationship between fish species locally vulnerable to climate change vs. fisheries exploitation indicates that the entire community is vulnerable on the many reefs where both stressors co-occur. Fishes involved in maintaining key ecosystem functions are more at risk from fishing than climate disturbances. This finding is encouraging as local and regional commitment to fisheries management action can maintain reef ecosystem functions pending progress towards the more complex global problem of stabilizing the climate. © 2011 Blackwell Publishing Ltd/CNRS.

Quantifying climatological ranges and anomalies for Pacific coral reef ecosystems.

Science.gov (United States)

Gove, Jamison M; Williams, Gareth J; McManus, Margaret A; Heron, Scott F; Sandin, Stuart A; Vetter, Oliver J; Foley, David G

2013-01-01

Coral reef ecosystems are exposed to a range of environmental forcings that vary on daily to decadal time scales and across spatial scales spanning from reefs to archipelagos. Environmental variability is a major determinant of reef ecosystem structure and function, including coral reef extent and growth rates, and the abundance, diversity, and morphology of reef organisms. Proper characterization of environmental forcings on coral reef ecosystems is critical if we are to understand the dynamics and implications of abiotic-biotic interactions on reef ecosystems. This study combines high-resolution bathymetric information with remotely sensed sea surface temperature, chlorophyll-a and irradiance data, and modeled wave data to quantify environmental forcings on coral reefs. We present a methodological approach to develop spatially constrained, island- and atoll-scale metrics that quantify climatological range limits and anomalous environmental forcings across U.S. Pacific coral reef ecosystems. Our results indicate considerable spatial heterogeneity in climatological ranges and anomalies across 41 islands and atolls, with emergent spatial patterns specific to each environmental forcing. For example, wave energy was greatest at northern latitudes and generally decreased with latitude. In contrast, chlorophyll-a was greatest at reef ecosystems proximate to the equator and northern-most locations, showing little synchrony with latitude. In addition, we find that the reef ecosystems with the highest chlorophyll-a concentrations; Jarvis, Howland, Baker, Palmyra and Kingman are each uninhabited and are characterized by high hard coral cover and large numbers of predatory fishes. Finally, we find that scaling environmental data to the spatial footprint of individual islands and atolls is more likely to capture local environmental forcings, as chlorophyll-a concentrations decreased at relatively short distances (>7 km) from 85% of our study locations. These metrics will help

Quantifying Climatological Ranges and Anomalies for Pacific Coral Reef Ecosystems

Science.gov (United States)

Gove, Jamison M.; Williams, Gareth J.; McManus, Margaret A.; Heron, Scott F.; Sandin, Stuart A.; Vetter, Oliver J.; Foley, David G.

2013-01-01

Coral reef ecosystems are exposed to a range of environmental forcings that vary on daily to decadal time scales and across spatial scales spanning from reefs to archipelagos. Environmental variability is a major determinant of reef ecosystem structure and function, including coral reef extent and growth rates, and the abundance, diversity, and morphology of reef organisms. Proper characterization of environmental forcings on coral reef ecosystems is critical if we are to understand the dynamics and implications of abiotic–biotic interactions on reef ecosystems. This study combines high-resolution bathymetric information with remotely sensed sea surface temperature, chlorophyll-a and irradiance data, and modeled wave data to quantify environmental forcings on coral reefs. We present a methodological approach to develop spatially constrained, island- and atoll-scale metrics that quantify climatological range limits and anomalous environmental forcings across U.S. Pacific coral reef ecosystems. Our results indicate considerable spatial heterogeneity in climatological ranges and anomalies across 41 islands and atolls, with emergent spatial patterns specific to each environmental forcing. For example, wave energy was greatest at northern latitudes and generally decreased with latitude. In contrast, chlorophyll-a was greatest at reef ecosystems proximate to the equator and northern-most locations, showing little synchrony with latitude. In addition, we find that the reef ecosystems with the highest chlorophyll-a concentrations; Jarvis, Howland, Baker, Palmyra and Kingman are each uninhabited and are characterized by high hard coral cover and large numbers of predatory fishes. Finally, we find that scaling environmental data to the spatial footprint of individual islands and atolls is more likely to capture local environmental forcings, as chlorophyll-a concentrations decreased at relatively short distances (>7 km) from 85% of our study locations. These metrics will

Quantifying climatological ranges and anomalies for Pacific coral reef ecosystems.

Directory of Open Access Journals (Sweden)

Jamison M Gove

Full Text Available Coral reef ecosystems are exposed to a range of environmental forcings that vary on daily to decadal time scales and across spatial scales spanning from reefs to archipelagos. Environmental variability is a major determinant of reef ecosystem structure and function, including coral reef extent and growth rates, and the abundance, diversity, and morphology of reef organisms. Proper characterization of environmental forcings on coral reef ecosystems is critical if we are to understand the dynamics and implications of abiotic-biotic interactions on reef ecosystems. This study combines high-resolution bathymetric information with remotely sensed sea surface temperature, chlorophyll-a and irradiance data, and modeled wave data to quantify environmental forcings on coral reefs. We present a methodological approach to develop spatially constrained, island- and atoll-scale metrics that quantify climatological range limits and anomalous environmental forcings across U.S. Pacific coral reef ecosystems. Our results indicate considerable spatial heterogeneity in climatological ranges and anomalies across 41 islands and atolls, with emergent spatial patterns specific to each environmental forcing. For example, wave energy was greatest at northern latitudes and generally decreased with latitude. In contrast, chlorophyll-a was greatest at reef ecosystems proximate to the equator and northern-most locations, showing little synchrony with latitude. In addition, we find that the reef ecosystems with the highest chlorophyll-a concentrations; Jarvis, Howland, Baker, Palmyra and Kingman are each uninhabited and are characterized by high hard coral cover and large numbers of predatory fishes. Finally, we find that scaling environmental data to the spatial footprint of individual islands and atolls is more likely to capture local environmental forcings, as chlorophyll-a concentrations decreased at relatively short distances (>7 km from 85% of our study locations

Mg/Ca and Sr/Ca as novel geochemical proxies for understanding sediment transport processes within coral reefs

Science.gov (United States)

Gacutan, J.; Vila-Concejo, A.; Nothdurft, L. D.; Fellowes, T. E.; Cathey, H. E.; Opdyke, B. N.; Harris, D. L.; Hamylton, S.; Carvalho, R. C.; Byrne, M.; Webster, J. M.

2017-10-01

Sediment transport is a key driver of reef zonation and biodiversity, where an understanding of sediment dynamics gives insights into past reef processes and allows the prediction of geomorphic responses to changing environmental conditions. However, modal conditions within the back-reef seldom promote sediment transport, hence direct observation is inherently difficult. Large benthic foraminifera (LBF) have previously been employed as 'tracers' to infer sediment transport pathways on coral reefs, as their habitat is largely restricted to the algal flat and post-mortem, their calcium carbonate test is susceptible to sediment transport forces into the back-reef. Foraminiferal test abundance and post-depositional test alteration have been used as proxies for sediment transport, although the resolution of these measures becomes limited by low test abundance and the lack of variation within test alteration. Here we propose the novel use of elemental ratios as a proxy for sediment transport. Two species, Baculogypsina sphaerulata and Calcarina capricornia, were analysed using a taphonomic index within One Tree and Lady Musgrave reefs, Great Barrier Reef (Australia). Inductively coupled plasma-atomic emission spectrometry (ICP-AES) was used to determine Mg/Ca and Sr/Ca and these ratios were compared with taphonomic data. Decreases in test Mg/Ca accompany increases in Sr/Ca in specimens from algal-flat to lagoonal samples in both species, mirroring trends indicated by taphonomic values, therefore indicating a relationship with test alteration. To delineate mechanisms driving changes in elemental ratios, back-scattered electron (BSE) images, elemental mapping and in situ quantitative spot analyses by electron microprobe microanalysis (EPMA) using wavelength dispersive X-ray spectrometers (WDS) were performed on un-altered algal flat and heavily abraded tests for both species. EPMA analyses reveal heterogeneity in Mg/Ca between spines and the test wall, implying the loss of

Reef fishes in biodiversity hotspots are at greatest risk from loss of coral species.

Science.gov (United States)

Holbrook, Sally J; Schmitt, Russell J; Messmer, Vanessa; Brooks, Andrew J; Srinivasan, Maya; Munday, Philip L; Jones, Geoffrey P

2015-01-01

Coral reef ecosystems are under a variety of threats from global change and anthropogenic disturbances that are reducing the number and type of coral species on reefs. Coral reefs support upwards of one third of all marine species of fish, so the loss of coral habitat may have substantial consequences to local fish diversity. We posit that the effects of habitat degradation will be most severe in coral regions with highest biodiversity of fishes due to greater specialization by fishes for particular coral habitats. Our novel approach to this important but untested hypothesis was to conduct the same field experiment at three geographic locations across the Indo-Pacific biodiversity gradient (Papua New Guinea; Great Barrier Reef, Australia; French Polynesia). Specifically, we experimentally explored whether the response of local fish communities to identical changes in diversity of habitat-providing corals was independent of the size of the regional species pool of fishes. We found that the proportional reduction (sensitivity) in fish biodiversity to loss of coral diversity was greater for regions with larger background species pools, reflecting variation in the degree of habitat specialization of fishes across the Indo-Pacific diversity gradient. This result implies that habitat-associated fish in diversity hotspots are at greater risk of local extinction to a given loss of habitat diversity compared to regions with lower species richness. This mechanism, related to the positive relationship between habitat specialization and regional biodiversity, and the elevated extinction risk this poses for biodiversity hotspots, may apply to species in other types of ecosystems.

Reef fishes in biodiversity hotspots are at greatest risk from loss of coral species.

Directory of Open Access Journals (Sweden)

Sally J Holbrook

Full Text Available Coral reef ecosystems are under a variety of threats from global change and anthropogenic disturbances that are reducing the number and type of coral species on reefs. Coral reefs support upwards of one third of all marine species of fish, so the loss of coral habitat may have substantial consequences to local fish diversity. We posit that the effects of habitat degradation will be most severe in coral regions with highest biodiversity of fishes due to greater specialization by fishes for particular coral habitats. Our novel approach to this important but untested hypothesis was to conduct the same field experiment at three geographic locations across the Indo-Pacific biodiversity gradient (Papua New Guinea; Great Barrier Reef, Australia; French Polynesia. Specifically, we experimentally explored whether the response of local fish communities to identical changes in diversity of habitat-providing corals was independent of the size of the regional species pool of fishes. We found that the proportional reduction (sensitivity in fish biodiversity to loss of coral diversity was greater for regions with larger background species pools, reflecting variation in the degree of habitat specialization of fishes across the Indo-Pacific diversity gradient. This result implies that habitat-associated fish in diversity hotspots are at greater risk of local extinction to a given loss of habitat diversity compared to regions with lower species richness. This mechanism, related to the positive relationship between habitat specialization and regional biodiversity, and the elevated extinction risk this poses for biodiversity hotspots, may apply to species in other types of ecosystems.

Predicting climate-driven regime shifts versus rebound potential in coral reefs.

Science.gov (United States)

Graham, Nicholas A J; Jennings, Simon; MacNeil, M Aaron; Mouillot, David; Wilson, Shaun K

2015-02-05

Climate-induced coral bleaching is among the greatest current threats to coral reefs, causing widespread loss of live coral cover. Conditions under which reefs bounce back from bleaching events or shift from coral to algal dominance are unknown, making it difficult to predict and plan for differing reef responses under climate change. Here we document and predict long-term reef responses to a major climate-induced coral bleaching event that caused unprecedented region-wide mortality of Indo-Pacific corals. Following loss of >90% live coral cover, 12 of 21 reefs recovered towards pre-disturbance live coral states, while nine reefs underwent regime shifts to fleshy macroalgae. Functional diversity of associated reef fish communities shifted substantially following bleaching, returning towards pre-disturbance structure on recovering reefs, while becoming progressively altered on regime shifting reefs. We identified threshold values for a range of factors that accurately predicted ecosystem response to the bleaching event. Recovery was favoured when reefs were structurally complex and in deeper water, when density of juvenile corals and herbivorous fishes was relatively high and when nutrient loads were low. Whether reefs were inside no-take marine reserves had no bearing on ecosystem trajectory. Although conditions governing regime shift or recovery dynamics were diverse, pre-disturbance quantification of simple factors such as structural complexity and water depth accurately predicted ecosystem trajectories. These findings foreshadow the likely divergent but predictable outcomes for reef ecosystems in response to climate change, thus guiding improved management and adaptation.

Conservation genetics and the resilience of reef-building corals.

Science.gov (United States)

van Oppen, Madeleine J H; Gates, Ruth D

2006-11-01

Coral reefs have suffered long-term decline due to a range of anthropogenic disturbances and are now also under threat from climate change. For appropriate management of these vulnerable and valuable ecosystems it is important to understand the factors and processes that determine their resilience and that of the organisms inhabiting them, as well as those that have led to existing patterns of coral reef biodiversity. The scleractinian (stony) corals deposit the structural framework that supports and promotes the maintenance of biological diversity and complexity of coral reefs, and as such, are major components of these ecosystems. The success of reef-building corals is related to their obligate symbiotic association with dinoflagellates of the genus Symbiodinium. These one-celled algal symbionts (zooxanthellae) live in the endodermal tissues of their coral host, provide most of the host's energy budget and promote rapid calcification. Furthermore, zooxanthellae are the main primary producers on coral reefs due to the oligotrophic nature of the surrounding waters. In this review paper, we summarize and critically evaluate studies that have employed genetics and/or molecular biology in examining questions relating to the evolution and ecology of reef-building corals and their algal endosymbionts, and that bear relevance to coral reef conservation. We discuss how these studies can focus future efforts, and examine how these approaches enhance our understanding of the resilience of reef-building corals.

Coral recovery may not herald the return of fishes on damaged coral reefs

KAUST Repository

Bellwood, David R.; Baird, Andrew Hamilton; Depczynski, Martial R.; Gonzá lez-Cabello, Alonso; Hoey, Andrew; Lefé vre, Carine D.; Tanner, Jennifer K.

2012-01-01

The dynamic nature of coral reefs offers a rare opportunity to examine the response of ecosystems to disruption due to climate change. In 1998, the Great Barrier Reef experienced widespread coral bleaching and mortality. As a result, cryptobenthic fish assemblages underwent a dramatic phase-shift. Thirteen years, and up to 96 fish generations later, the cryptobenthic fish assemblage has not returned to its pre-bleach configuration. This is despite coral abundances returning to, or exceeding, pre-bleach values. The post-bleach fish assemblage exhibits no evidence of recovery. If these short-lived fish species are a model for their longer-lived counterparts, they suggest that (1) the full effects of the 1998 bleaching event on long-lived fish populations have yet to be seen, (2) it may take decades, or more, before recovery or regeneration of these long-lived species will begin, and (3) fish assemblages may not recover to their previous composition despite the return of corals. © 2012 Springer-Verlag.

Coral recovery may not herald the return of fishes on damaged coral reefs

KAUST Repository

Bellwood, David R.

2012-03-25

The dynamic nature of coral reefs offers a rare opportunity to examine the response of ecosystems to disruption due to climate change. In 1998, the Great Barrier Reef experienced widespread coral bleaching and mortality. As a result, cryptobenthic fish assemblages underwent a dramatic phase-shift. Thirteen years, and up to 96 fish generations later, the cryptobenthic fish assemblage has not returned to its pre-bleach configuration. This is despite coral abundances returning to, or exceeding, pre-bleach values. The post-bleach fish assemblage exhibits no evidence of recovery. If these short-lived fish species are a model for their longer-lived counterparts, they suggest that (1) the full effects of the 1998 bleaching event on long-lived fish populations have yet to be seen, (2) it may take decades, or more, before recovery or regeneration of these long-lived species will begin, and (3) fish assemblages may not recover to their previous composition despite the return of corals. © 2012 Springer-Verlag.

Shifting paradigms in restoration of the world's coral reefs.

Science.gov (United States)

van Oppen, Madeleine J H; Gates, Ruth D; Blackall, Linda L; Cantin, Neal; Chakravarti, Leela J; Chan, Wing Y; Cormick, Craig; Crean, Angela; Damjanovic, Katarina; Epstein, Hannah; Harrison, Peter L; Jones, Thomas A; Miller, Margaret; Pears, Rachel J; Peplow, Lesa M; Raftos, David A; Schaffelke, Britta; Stewart, Kristen; Torda, Gergely; Wachenfeld, David; Weeks, Andrew R; Putnam, Hollie M

2017-09-01

Many ecosystems around the world are rapidly deteriorating due to both local and global pressures, and perhaps none so precipitously as coral reefs. Management of coral reefs through maintenance (e.g., marine-protected areas, catchment management to improve water quality), restoration, as well as global and national governmental agreements to reduce greenhouse gas emissions (e.g., the 2015 Paris Agreement) is critical for the persistence of coral reefs. Despite these initiatives, the health and abundance of corals reefs are rapidly declining and other solutions will soon be required. We have recently discussed options for using assisted evolution (i.e., selective breeding, assisted gene flow, conditioning or epigenetic programming, and the manipulation of the coral microbiome) as a means to enhance environmental stress tolerance of corals and the success of coral reef restoration efforts. The 2014-2016 global coral bleaching event has sharpened the focus on such interventionist approaches. We highlight the necessity for consideration of alternative (e.g., hybrid) ecosystem states, discuss traits of resilient corals and coral reef ecosystems, and propose a decision tree for incorporating assisted evolution into restoration initiatives to enhance climate resilience of coral reefs. © 2017 John Wiley & Sons Ltd.

Habitat dynamics, marine reserve status, and the decline and recovery of coral reef fish communities

Science.gov (United States)

Williamson, David H; Ceccarelli, Daniela M; Evans, Richard D; Jones, Geoffrey P; Russ, Garry R

2014-01-01

Severe climatic disturbance events often have major impacts on coral reef communities, generating cycles of decline and recovery, and in some extreme cases, community-level phase shifts from coral-to algal-dominated states. Benthic habitat changes directly affect reef fish communities, with low coral cover usually associated with low fish diversity and abundance. No-take marine reserves (NTRs) are widely advocated for conserving biodiversity and enhancing the sustainability of exploited fish populations. Numerous studies have documented positive ecological and socio-economic benefits of NTRs; however, the ability of NTRs to ameliorate the effects of acute disturbances on coral reefs has seldom been investigated. Here, we test these factors by tracking the dynamics of benthic and fish communities, including the important fishery species, coral trout (Plectropomus spp.), over 8 years in both NTRs and fished areas in the Keppel Island group, Great Barrier Reef, Australia. Two major disturbances impacted the reefs during the monitoring period, a coral bleaching event in 2006 and a freshwater flood plume in 2011. Both disturbances generated significant declines in coral cover and habitat complexity, with subsequent declines in fish abundance and diversity, and pronounced shifts in fish assemblage structure. Coral trout density also declined in response to the loss of live coral, however, the approximately 2:1 density ratio between NTRs and fished zones was maintained over time. The only post-disturbance refuges for coral trout spawning stocks were within the NTRs that escaped the worst effects of the disturbances. Although NTRs had little discernible effect on the temporal dynamics of benthic or fish communities, it was evident that the post-disturbance refuges for coral trout spawning stocks within some NTRs may be critically important to regional-scale population persistence and recovery. PMID:24634720

Coral reefs as indicators of marine environmental health

International Nuclear Information System (INIS)

Kumaraguru, A.K.

2007-01-01

Coral reefs are one of the most productive and diverse of all ecosystems on the Earth. Although they occupy less than 0.25 percent of the marine environment, the reefs support more than a quarter of all known fish species. They serve as critical habitats for numerous tropical species including reef fishes of ornamental nature and edible fishes. They protect the shores from storms and wave actions

Reef demise and back-stepping during the last interglacial, northeast Yucatan

Science.gov (United States)

Blanchon, Paul

2010-06-01

The elevation of reefs and coastal deposits during the last Interglaciation (MIS-5e) indicates that sea level reached a highstand of as much as 6 m above the present, but it is uncertain how rapidly this level was attained and how it impacted reef development. To investigate this problem, I made a detailed sedimentological analysis of a well-dated reef from the northeast coast of the stable Yucatan Peninsula. Two linear reef tracts were delineated which are offset and at different elevations. The lower reef tract crops out along northern shore for 575 m and extends from below present mean sea level to +3 m. The reef crest facies consists of large Acropora palmata colonies dispersed within a coral boulder-gravel and is flanked by an A. cervicornis-dominated reef-front and a large area of lagoonal framework formed by coalesced patches of A. cervicornis and Montastraea spp. Constituents in the upper centimetre of the lower tract are heavily encrusted by a cap of crustose corallines and, in places, are levelled by a discontinuous marine-erosion surface. The upper reef tract crops out ~150 m inland up to an elevation of +5.8 m and parallels the southern section of shore for ~400 m. It also consist of an A. palmata-dominated crest facies flanked by reef-front, back-reef and lagoonal frameworks. In this case, however, lagoonal frameworks are dominated by a sediment-tolerant assemblage of branching coralline algae. Also different is the lack of encrustation by corallines, and the infiltration of upper tract facies by beach-derived shell-gravels from regressive shoreface deposits above. These results indicate that the lower reef tract and lagoonal patch-reefs formed at a sea level of +3 m. Final capping by crustose corallines and discontinuous marine erosion indicates that the lower tract was terminated by the complete demise of corals on the crest but only patchy demise in the lagoon. Areas of continuous framework accretion between the lagoonal patch reefs and the upper

Hyperspectral remote sensing of wild oyster reefs

Science.gov (United States)

Le Bris, Anthony; Rosa, Philippe; Lerouxel, Astrid; Cognie, Bruno; Gernez, Pierre; Launeau, Patrick; Robin, Marc; Barillé, Laurent

2016-04-01

The invasion of the wild oyster Crassostrea gigas along the western European Atlantic coast has generated changes in the structure and functioning of intertidal ecosystems. Considered as an invasive species and a trophic competitor of the cultivated conspecific oyster, it is now seen as a resource by oyster farmers following recurrent mass summer mortalities of oyster spat since 2008. Spatial distribution maps of wild oyster reefs are required by local authorities to help define management strategies. In this work, visible-near infrared (VNIR) hyperspectral and multispectral remote sensing was investigated to map two contrasted intertidal reef structures: clusters of vertical oysters building three-dimensional dense reefs in muddy areas and oysters growing horizontally creating large flat reefs in rocky areas. A spectral library, collected in situ for various conditions with an ASD spectroradiometer, was used to run Spectral Angle Mapper classifications on airborne data obtained with an HySpex sensor (160 spectral bands) and SPOT satellite HRG multispectral data (3 spectral bands). With HySpex spectral/spatial resolution, horizontal oysters in the rocky area were correctly classified but the detection was less efficient for vertical oysters in muddy areas. Poor results were obtained with the multispectral image and from spatially or spectrally degraded HySpex data, it was clear that the spectral resolution was more important than the spatial resolution. In fact, there was a systematic mud deposition on shells of vertical oyster reefs explaining the misclassification of 30% of pixels recognized as mud or microphytobenthos. Spatial distribution maps of oyster reefs were coupled with in situ biomass measurements to illustrate the interest of a remote sensing product to provide stock estimations of wild oyster reefs to be exploited by oyster producers. This work highlights the interest of developing remote sensing techniques for aquaculture applications in coastal

Plastic waste associated with disease on coral reefs.

Science.gov (United States)

Lamb, Joleah B; Willis, Bette L; Fiorenza, Evan A; Couch, Courtney S; Howard, Robert; Rader, Douglas N; True, James D; Kelly, Lisa A; Ahmad, Awaludinnoer; Jompa, Jamaluddin; Harvell, C Drew

2018-01-26

Plastic waste can promote microbial colonization by pathogens implicated in outbreaks of disease in the ocean. We assessed the influence of plastic waste on disease risk in 124,000 reef-building corals from 159 reefs in the Asia-Pacific region. The likelihood of disease increases from 4% to 89% when corals are in contact with plastic. Structurally complex corals are eight times more likely to be affected by plastic, suggesting that microhabitats for reef-associated organisms and valuable fisheries will be disproportionately affected. Plastic levels on coral reefs correspond to estimates of terrestrial mismanaged plastic waste entering the ocean. We estimate that 11.1 billion plastic items are entangled on coral reefs across the Asia-Pacific and project this number to increase 40% by 2025. Plastic waste management is critical for reducing diseases that threaten ecosystem health and human livelihoods. Copyright © 2018, The Authors, some rights reserved; exclusive licensee American Association for the Advancement of Science. No claim to original U.S. Government Works.

U.S. coral reefs; imperiled national treasures

Science.gov (United States)

Field, M.E.; Cochran, S.A.; Evans, K.R.

2002-01-01

Coral reefs are home to 25% of all marine species. However, the tiny colonial animals that build these intricate limestone masses are dying at alarming rates. If this trend continues, in 20 years the living corals on many of the world's reefs will be dead and the ecosystems that depend on them severely damaged. As part of the effort to protect our Nation's extensive reefs, U.S. Geological Survey (USGS) scientists are working to better understand the processes that affect the health of these ecologically and economically important ecosystems.

Coastal nutrification and coral health at Porto Seguro reefs, Brazil

Science.gov (United States)

Costa, O.; Attrill, M.; Nimmo, M.

2003-04-01

Human activities have substantially increased the natural flux of nutrients to coastal systems worldwide. In Brazilian reefs, all major stresses (sedimentation, overfishing, tourism-related activities and nutrification) are human induced. To assess nutrification levels in Brazilian coastal reefs, measurements of the distribution patterns of nutrients and chlorophyll concentrations were conducted in three nearshore and offshore reefs with distinct nutrient inputs along the south coast of Bahia State. Seawater and porewater samples were analysed for soluble reactive phosphorus, total oxidised nitrogen and reactive silica. Benthic surveys were performed at all sites to investigate the relationships between benthic community composition and nutrient and chlorophyll concentrations. Sampling was undertaken in dry and rainy seasons. Results of both seawater and porewater nutrient measurements revealed the occurrence of consistent spatial and temporal patterns. An inshore-offshore gradient reflects the occurrence of land-based point sources, with significant amount of nutrients being delivered by human activities on the coast (untreated sewage and groundwater seepage). Another spatial gradient is related to distance from a localized source of pollution (an urban settlement without sewerage treatment) with two nearshore reefs presenting distinct nutrient and chlorophyll concentrations. Seasonal variations suggest that submarine groundwater discharge (SGD) is the primary source of nutrients for the coastal reefs during rainy season. The data also suggests that the SGD effect is not restricted to nearshore reefs, and may be an important factor controlling the differences between landward and seaward sides on the offshore reef. Benthic community assessment revealed that turf alga is the dominant group in all studied reefs and that zoanthids are the organisms most adapted to take advantage of nutrient increase in coastal areas. At nearshore reefs, there was a negative

Conservation status and spatial patterns of AGRRA vitality indices in Southwestern Atlantic reefs.

Science.gov (United States)

Kikuchi, Ruy K P; Leão, Zelinda M A N; Oliveira, Marília D M

2010-05-01

Coral reefs along the Eastern Brazilian coast extend for a distance of 800 km from 12 degrees to 18 degrees S. They are the largest and the richest reefs of Brazil coasts, and represent the Southernmost coral reefs of the Southwestern Atlantic Ocean. Few reef surveys were performed in the 90's in reef areas of Bahia State, particularly in the Abrolhos reef complex, in the Southernmost side of the state. A monitoring program applying the Atlantic and Gulf Rapid Reef Assessment (AGRRA) protocol was initiated in 2000, in the Abrolhos National Marine Park, after the creation of the South Tropical America (STA) Regional Node of the Global Coral Reef Monitoring Network (GCRMN) by the end of 1999. From that time up to 2005, nine reef surveys were conducted along the coast of the State of Bahia, including 26 reefs, with 95 benthic sites, 280 benthic transects, 2025 quadrats and 3537 stony corals. Eighteen of the 26 investigated reefs were assessed once and eight reefs of Abrolhos were surveyed twice to four times. The MDS ordination, analysis of similarity (ANOSIM, one way and two-way nested layouts) and similarity percentages (SIMPER) tests were applied to investigate the spatial and temporal patterns of reef vitality. Four indicators of the coral vitality: live coral cover, the density of the larger corals (colonics > 20cm per reef site) and of the coral recruits (colonies coast, are in poorer condition than the reefs located more than 5 km off the coast. A higher density of coral colonies, lower macroalgal index, higher relative percent of turf algae and higher density of coral recruits in offshore reefs compared to the nearshore reefs are the conditions that contribute more than 80% to the dissimilarity between them. The offshore reefs are in better vital condition than the nearshore reefs and have a set of vitality indices more closely related to the Northwestern Atlantic reefs than the nearshore reef. These have been most severely impacted by the effects of direct

Human disturbances on coral reefs in Sri Lanka: A case study

Energy Technology Data Exchange (ETDEWEB)

Oehman, M C; Linden, O [Stockholm Univ. (Sweden). Dept. of Zoology; Rajasuriya, A [NARA, Crow Island, Colombo (Sri Lanka)

1993-01-01

The degradation of coral reefs in Sri Lanka has increased substantially over the last decades. Human activities causing this degradation include: mining for lime production, sewage discharges, discharges of oil and other pollutants in connection with shipping and port activities, destructive fishing practices, land and mangrove destruction, tourism and the collecting of fauna such as fish, shells and corals. In this study, three adjacent coral reefs; Bar Reef, Talawila Reef, and Kandakuliya Reef, which are widely scattered patch reefs off Kalpitiya Peninsula, northwestern Sri Lanka, were surveyed and compared in terms of their fish and coral diversity and abundance as well as human and natural disturbances. Information was gathered by snorkeling in visual overview surveys and by scuba diving in detailed transect surveys. When each reef was ranked according to the extent of live coral cover, and chaetodontid diversity, the results indicated that Bar Reef was in excellent condition, Talawila Reef was intermediate, and Kandakuliya Reef was in poor condition. The diversity of coral genera, the topographic relief and the proportion of coral rubble, did not follow the same pattern. The number of coral genera found was 49, while 283 fish species belonging to 51 families were recorded. Human disturbance factors on the reefs were found to be net fishing, boat anchoring and ornamental fish collection for the aquarium trade. Bottom.set nylon nets in particular were found to have a very destructive impact on the bottom fauna. 33 refs, 7 figs, 1 tab

Coral Reef Ecosystems under Climate Change and Ocean Acidification

Directory of Open Access Journals (Sweden)

Ove Hoegh-Guldberg

2017-05-01

Full Text Available Coral reefs are found in a wide range of environments, where they provide food and habitat to a large range of organisms as well as providing many other ecological goods and services. Warm-water coral reefs, for example, occupy shallow sunlit, warm, and alkaline waters in order to grow and calcify at the high rates necessary to build and maintain their calcium carbonate structures. At deeper locations (40–150 m, “mesophotic” (low light coral reefs accumulate calcium carbonate at much lower rates (if at all in some cases yet remain important as habitat for a wide range of organisms, including those important for fisheries. Finally, even deeper, down to 2,000 m or more, the so-called “cold-water” coral reefs are found in the dark depths. Despite their importance, coral reefs are facing significant challenges from human activities including pollution, over-harvesting, physical destruction, and climate change. In the latter case, even lower greenhouse gas emission scenarios (such as Representative Concentration Pathway RCP 4.5 are likely drive the elimination of most warm-water coral reefs by 2040–2050. Cold-water corals are also threatened by warming temperatures and ocean acidification although evidence of the direct effect of climate change is less clear. Evidence that coral reefs can adapt at rates which are sufficient for them to keep up with rapid ocean warming and acidification is minimal, especially given that corals are long-lived and hence have slow rates of evolution. Conclusions that coral reefs will migrate to higher latitudes as they warm are equally unfounded, with the observations of tropical species appearing at high latitudes “necessary but not sufficient” evidence that entire coral reef ecosystems are shifting. On the contrary, coral reefs are likely to degrade rapidly over the next 20 years, presenting fundamental challenges for the 500 million people who derive food, income, coastal protection, and a range of

Mesoscale variation in the photophysiology of the reef building coral Pocillopora damicornis along an environmental gradient

Science.gov (United States)

Cooper, Timothy F.; Ulstrup, Karin E.

2009-06-01

Spatial variation in the photophysiology of symbiotic dinoflagellates (zooxanthellae) of the scleractinian coral Pocillopora damicornis was examined along an environmental gradient in the Whitsunday Islands (Great Barrier Reef) at two depths (3 m and 6 m). Chlorophyll a fluorescence of photosystem II (PSII) and PAR-absorptivity measurements were conducted using an Imaging-PAM (pulse-amplitude-modulation) fluorometer. Most photophysiological parameters correlated with changes in environmental conditions quantified by differences in water quality along the gradient. For example, maximum quantum yield ( Fv/ Fm) increased and PAR-absorptivity decreased as water quality improved along the gradient from nearshore reefs (low irradiance, elevated nutrients and sediments) to outer islands (high irradiance, low nutrients and sediments). For apparent photosynthetic rate (PS max) and minimum saturating irradiance ( Ek), the direction of change differed depending on sampling depth, suggesting that different mechanisms of photo-acclimatisation operated between shallow and deep corals. Deep corals conformed to typical patterns of light/shade acclimatisation whereas shallow corals exhibited reduced PS max and Ek with improving water quality coinciding with greater heat dissipation (NPQ 241). Furthermore, deep corals on nearshore reefs exhibited elevated Q241 in comparison to outer islands possibly due to effects of sedimentation and/or pollutants rather than irradiance. These results highlight the importance of mesoscale sampling to obtain useful estimates of the variability of photophysiological parameters, particularly if such measures are to be used as bioindicators of the condition of coral reefs.