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Sample records for granular cytoplasmic pattern

  1. Granular patterns

    CERN Document Server

    Aranson, Igor S

    2009-01-01

    This title presents a review of experiments and novel theoretical concepts needed to understand the mechanisms of pattern formation in granular materials. An effort is made to connect concepts and ideas developed in granular physics with new emergent fields, especially in biology, such as cytoskeleton dynamics.

  2. Granular cell tumor in an endangered Puerto Rican Amazon parrot (Amazon vittata)

    Science.gov (United States)

    Quist, C.F.; Latimer, K.S.; Goldade, S.L.; Rivera, A.; Dein, F.J.

    1999-01-01

    A 3 cm diameter mass from the metacarpus of a Puerto Rican Amazon parrot was diagnosed as a granular cell tumour based on light microscopy. The cytoplasmic granules were periodic-acid Schiff positive and diastase resistant. Ultrastructural characteristics of the cells included convoluted nuclei and the presence of numerous cytoplasmic tertiary lysosomes. This is only the second granular cell tumour reported in a bird. We speculate that most granular cell tumours are derived from cells that are engaged in some type of cellular degradative process, creating a similar morphologic appearance, but lacking a uniform histogenesis.

  3. Mathematical modeling of high-rate Anammox UASB reactor based on granular packing patterns

    International Nuclear Information System (INIS)

    Tang, Chong-Jian; He, Rui; Zheng, Ping; Chai, Li-Yuan; Min, Xiao-Bo

    2013-01-01

    Highlights: ► A novel model was conducted to estimate volumetric nitrogen conversion rates. ► The packing patterns of the granules in Anammox reactor are investigated. ► The simple cubic packing pattern was simulated in high-rate Anammox UASB reactor. ► Operational strategies concerning sludge concentration were proposed by the modeling. -- Abstract: A novel mathematical model was developed to estimate the volumetric nitrogen conversion rates of a high-rate Anammox UASB reactor based on the packing patterns of granular sludge. A series of relationships among granular packing density, sludge concentration, hydraulic retention time and volumetric conversion rate were constructed to correlate Anammox reactor performance with granular packing patterns. It was suggested that the Anammox granules packed as the equivalent simple cubic pattern in high-rate UASB reactor with packing density of 50–55%, which not only accommodated a high concentration of sludge inside the reactor, but also provided large pore volume, thus prolonging the actual substrate conversion time. Results also indicated that it was necessary to improve Anammox reactor performance by enhancing substrate loading when sludge concentration was higher than 37.8 gVSS/L. The established model was carefully calibrated and verified, and it well simulated the performance of granule-based high-rate Anammox UASB reactor

  4. Mathematical modeling of high-rate Anammox UASB reactor based on granular packing patterns

    Energy Technology Data Exchange (ETDEWEB)

    Tang, Chong-Jian, E-mail: chjtangzju@yahoo.com.cn [Department of Environmental Engineering, School of Metallurgical Science and Engineering, Central South University, Changsha 410083 (China); National Engineering Research Center for Control and Treatment of Heavy Metal Pollution, Changsha 410083 (China); He, Rui; Zheng, Ping [Department of Environmental Engineering, Zhejiang University, Zijingang Campus, Hangzhou 310058 (China); Chai, Li-Yuan; Min, Xiao-Bo [Department of Environmental Engineering, School of Metallurgical Science and Engineering, Central South University, Changsha 410083 (China); National Engineering Research Center for Control and Treatment of Heavy Metal Pollution, Changsha 410083 (China)

    2013-04-15

    Highlights: ► A novel model was conducted to estimate volumetric nitrogen conversion rates. ► The packing patterns of the granules in Anammox reactor are investigated. ► The simple cubic packing pattern was simulated in high-rate Anammox UASB reactor. ► Operational strategies concerning sludge concentration were proposed by the modeling. -- Abstract: A novel mathematical model was developed to estimate the volumetric nitrogen conversion rates of a high-rate Anammox UASB reactor based on the packing patterns of granular sludge. A series of relationships among granular packing density, sludge concentration, hydraulic retention time and volumetric conversion rate were constructed to correlate Anammox reactor performance with granular packing patterns. It was suggested that the Anammox granules packed as the equivalent simple cubic pattern in high-rate UASB reactor with packing density of 50–55%, which not only accommodated a high concentration of sludge inside the reactor, but also provided large pore volume, thus prolonging the actual substrate conversion time. Results also indicated that it was necessary to improve Anammox reactor performance by enhancing substrate loading when sludge concentration was higher than 37.8 gVSS/L. The established model was carefully calibrated and verified, and it well simulated the performance of granule-based high-rate Anammox UASB reactor.

  5. Formation of periodic and localized patterns in an oscillating granular layer.

    Energy Technology Data Exchange (ETDEWEB)

    Aranson, I.; Tsimring, L. S.; Materials Science Division; Bar Ilan Univ.; Univ. of California at San Diego

    1998-02-01

    A simple phenomenological model for pattern formation in a vertically vibrated layer of granular particles is proposed. This model exhibits a variety of stable cellular patterns including standing rolls and squares as well as localized excitations (oscillons and worms), similar to recent experimental observations (Umbanhowar et al., 1996). The model is an order parameter equation for the parametrically excited waves coupled to the mass conservation law. The structure and dynamics of the solutions resemble closely the properties of patterns observed in the experiments.

  6. Granular neural networks, pattern recognition and bioinformatics

    CERN Document Server

    Pal, Sankar K; Ganivada, Avatharam

    2017-01-01

    This book provides a uniform framework describing how fuzzy rough granular neural network technologies can be formulated and used in building efficient pattern recognition and mining models. It also discusses the formation of granules in the notion of both fuzzy and rough sets. Judicious integration in forming fuzzy-rough information granules based on lower approximate regions enables the network to determine the exactness in class shape as well as to handle the uncertainties arising from overlapping regions, resulting in efficient and speedy learning with enhanced performance. Layered network and self-organizing analysis maps, which have a strong potential in big data, are considered as basic modules,. The book is structured according to the major phases of a pattern recognition system (e.g., classification, clustering, and feature selection) with a balanced mixture of theory, algorithm, and application. It covers the latest findings as well as directions for future research, particularly highlighting bioinf...

  7. Pattern recognition algorithms for data mining scalability, knowledge discovery and soft granular computing

    CERN Document Server

    Pal, Sankar K

    2004-01-01

    Pattern Recognition Algorithms for Data Mining addresses different pattern recognition (PR) tasks in a unified framework with both theoretical and experimental results. Tasks covered include data condensation, feature selection, case generation, clustering/classification, and rule generation and evaluation. This volume presents various theories, methodologies, and algorithms, using both classical approaches and hybrid paradigms. The authors emphasize large datasets with overlapping, intractable, or nonlinear boundary classes, and datasets that demonstrate granular computing in soft frameworks.Organized into eight chapters, the book begins with an introduction to PR, data mining, and knowledge discovery concepts. The authors analyze the tasks of multi-scale data condensation and dimensionality reduction, then explore the problem of learning with support vector machine (SVM). They conclude by highlighting the significance of granular computing for different mining tasks in a soft paradigm.

  8. Immunohistochemical study of Ulex europaeus agglutinin 1 (UEA-1) binding of megakaryocytes in bone marrow biopsy specimens: demonstration of heterogeneity in staining pattern reflecting the stages of differentiation.

    Science.gov (United States)

    Liu, S M; Li, C Y

    1996-01-01

    During differentiation, megakaryocytes undergo nuclear endoreplication, an increase in cell size, cytoplasmic granulation, and release of platelets. The changes in highly lobulated nuclei with varying degree of polyploidy and increasing cell size are easily recognized morphologically. However, the actual cytoplasmic changes are more difficult to perceive morphologically. With the peroxidase-antiperoxidase (PAP) method using UEA-1 as the binding protein to the alpha-L-fucose of glycoprotein synthesized by megakaryocytes, we observed significant variation in cytoplasmic staining of megakaryocytes in routinely processed bone marrow biopsy sections. A total of 3344 megakaryocytes in bone marrow sections from 10 patients with nonhematologic diseases and from 10 patients with idiopathic thrombocytopenic purpura (ITP) was studied. According to the intensity and pattern of cytoplasmic staining, we divided megakaryocytes into at least six groups: (1) low granular (LG), (2) diffuse granular (DG), (3) diffuse dense granular (DDG), (4) marginal granular (MG), (5) denuded (DMK), and (6) endomitotic (EndoM). Most of the megakaryocytes were DG (mean, 42.75% +/- 19.21%) and DDG (mean, 50.25% +/- 21.23%). In correlation with nuclear morphology and cell size, it appears that substances binding to UEA-1 are located in the paranuclear region in early megakaryocytes and produce a low granular focal staining pattern (LG cells). Next, the granules spread throughout the cytoplasm (DG cells) and increase in quantity (DDG). This is followed by migration of granules to the periphery of the cytoplasm (MG cells) and is associated with the liberation of platelets and eventual formation of DMK megakaryocytes. Endomitosis, regulated by unknown factors, occurred in the MG stage. In comparing the group with nonhematologic disease (mean DG, 35.4% +/- 18.48%; DDG, 58.4% +/- 21.8%) and the group with ITP (mean DG, 50.1% +/- 17.82%; DDG, 42.1% +/- 18.12%), we found an increasing proportion of DG

  9. Granular Silo collapse: an experimental study

    Science.gov (United States)

    Clement, Eric; Gutierriez, Gustavo; Boltenhagen, Philippe; Lanuza, Jose

    2008-03-01

    We present an experimental work that develop some basic insight into the pre-buckling behavior and the buckling transition toward plastic collapse of a granular silo. We study different patterns of deformation generated on thin paper cylindrical shells during granular discharge. We study the collapse threshold for different bed height, flow rates and grain sizes. We compare the patterns that appear during the discharge of spherical beads, with those obtained in the axially compressed cylindrical shells. When the height of the granular column is close to the collapse threshold, we describe a ladder like pattern that rises around the cylinder surface in a spiral path of diamond shaped localizations, and develops into a plastic collapsing fold that grows around the collapsing silo.

  10. DISCOVERING AND LABELLING OF TEMPORAL GRANULARITY PATTERNS IN ELECTRIC POWER DEMAND WITH A BRAZILIAN CASE STUDY

    Directory of Open Access Journals (Sweden)

    Gabriela Servidone

    Full Text Available ABSTRACT Clustering is commonly used to group data in order to represent the behaviour of a system as accurately as possible by obtaining patterns and profiles. In this paper, clustering is applied with partitioning-clustering techniques, specifically, Partitioning around Medoids (PAM to analyse load curves from a city of South-eastern Brazil in São Paulo state. A top-down approach in time granularity is performed to detect and to label profiles which could be affected by seasonal trends and daily/hourly time blocks. Time-granularity patterns are useful to support the improvement of activities related to distribution, transmission and scheduling of energy supply. Results indicated four main patterns which were post-processed in hourly blocks by using shades of grey to help final-user to understand demand thresholds according to the meaning of dark grey, light grey and white colours. A particular and different behaviour of load curve was identified for the studied city if it is compared to the classical behaviour of urban cities.

  11. Is fine needle aspiration cytology a useful diagnostic tool for granular cell tumors? A cytohistological review with emphasis on pitfalls

    Directory of Open Access Journals (Sweden)

    Jason Koshy

    2014-01-01

    Full Text Available Background: Granular cell tumors (GCT formerly known as Abrikossoff tumor or granular cell myoblastoma, are rare neoplasms encountered in the fine needle aspiration (FNA service. Named because of their highly granular cytoplasm which is invariably positive for the S-100 antibody, the classic GCT is thought to be of neural origin. The cytomorphological features range from highly cellular to scanty cellular smears with dispersed polygonal tumor cells. The cells have abundant eosinophilic granular cytoplasm, eccentric round to oval vesicular nuclei with small inconspicuous nucleoli. The fragility of the cells can result in many stripped nuclei in a granular background. The differential diagnosis occasionally can range from a benign or reactive process to features that are suspicious for malignancy. Some of the concerning cytologic features include necrosis, mitoses and nuclear pleomorphism. Methods: We identified 6 cases of suspected GCT on cytology within the last 10 years and compared them to their final histologic diagnoses. Results: Four had histologic correlation of GCT including one case that was suspicious for GCT on cytology and called atypical with features concerning for a malignant neoplasm. Of the other two cases where GCT was suspected, one showed breast tissue with fibrocystic changes, and the other was a Hurthle cell adenoma of the thyroid. Conclusions: These results imply that FNA has utility in the diagnosis of GCT, and should be included in the differential diagnoses when cells with abundant granular cytoplasm are seen on cytology. Careful attention to cytologic atypia, signs of reactive changes, use of immunohistochemistry, and clinical correlation are helpful in arriving at a definite diagnosis on FNA cytology.

  12. Granular-relational data mining how to mine relational data in the paradigm of granular computing ?

    CERN Document Server

    Hońko, Piotr

    2017-01-01

    This book provides two general granular computing approaches to mining relational data, the first of which uses abstract descriptions of relational objects to build their granular representation, while the second extends existing granular data mining solutions to a relational case. Both approaches make it possible to perform and improve popular data mining tasks such as classification, clustering, and association discovery. How can different relational data mining tasks best be unified? How can the construction process of relational patterns be simplified? How can richer knowledge from relational data be discovered? All these questions can be answered in the same way: by mining relational data in the paradigm of granular computing! This book will allow readers with previous experience in the field of relational data mining to discover the many benefits of its granular perspective. In turn, those readers familiar with the paradigm of granular computing will find valuable insights on its application to mining r...

  13. Immobilization patterns and dynamics of acetate-utilizing methanogens in sterile granular sludge from upflow anaerobic sludge blanket (UASB) reactors

    DEFF Research Database (Denmark)

    Schmidt, Jens Ejbye; Ahring, Birgitte Kiær

    1999-01-01

    Sterile granular sludge was inoculated with either Methanosarcina mazeii S-6, Methanosaeta concilii GP-6, or both species in acetate-fea upflow anaerobic sludge blanket (UASB) reactors to investigate the immobilization patterns and dynamics of aceticlastic methanogens in granular sludge. After......, but where the acetate concentration was low this strain was immobilized on support material as single cells or small clumps, The data clearly show that the two aceticlastic methanogens immobilize differently in UASB systems, depending on the conditions found throughout the UASB reactor....

  14. Immobilization patterns and dynamics of acetate-utilizing methanogens immobilized in sterile granular sludge in upflow anaerobic sludge blanket reactors

    DEFF Research Database (Denmark)

    Schmidt, Jens Ejbye; Ahring, Birgitte Kiær

    1999-01-01

    Sterile granular sludge was inoculated with either Methanosarcina mazeii S-6, Methanosaeta concilii GP-6, or both species in acetate-fea upflow anaerobic sludge blanket (UASB) reactors to investigate the immobilization patterns and dynamics of aceticlastic methanogens in granular sludge. After......, but where the acetate concentration was low this strain was immobilized on support material as single cells or small clumps, The data clearly show that the two aceticlastic methanogens immobilize differently in UASB systems, depending on the conditions found throughout the UASB reactor....

  15. Axial segregation of granular media rotated in a drum mixer: Pattern evolution

    International Nuclear Information System (INIS)

    Hill, K.M.; Kakalios, J.; Caprihan, A.

    1997-01-01

    In the traditional axial segregation effect, a homogeneous mixture of different types of granular material rotated in a drum mixer segregates into surface bands of relatively pure single concentrations along the axis of rotation. This effect primarily has been studied with respect to the initial segregation. However, the initial pattern is not stable, but evolves in time with continued rotation through metastable states of fewer and fewer bands. We describe two experimental studies of this evolution that provide a more complete picture of the dynamics involved in the pattern progression. The use of a charge coupled device camera in conjunction with digital analysis techniques provides a quantitative measure of the state of the surface as a function of time, while magnetic resonance imaging techniques provide a noninvasive method for studying the segregation beneath the surface. These methods indicate that the underlying mechanisms for the pattern evolution may originate in the bulk of the material, beneath the avalanching surface. copyright 1997 The American Physical Society

  16. Dynamic aerofracture or hydrofracture of dense granular packing: pressure and viscosity control of the fracture patterns

    Science.gov (United States)

    Niebling, Michael J.; Toussaint, Renaud; Flekkøy, Eirik G.; Jørgen Måløy, Knut

    2013-04-01

    Stress induced by fluid or gases can cause diverse materials to break and fracture. Such hydraulic fractures are a natural and common phenomenon in the field of volcanism and are artificially initiated to enhance the recovery of natural gas and mineral oil by fracturing the reservoir rock with pressurized fluids. A procedure also known as fracking. Recently a new perspective on hydrofractures was added with the storage of supercritical CO2. In this respect two scenarios are considered. First it is one option to inject CO2 into existing hydrofractures, and second the injection of the CO2 can create additional fractures. The typical components for such fractures are a porous material and a compressible gas. The dynamics of such fractures and displacement patterns are simulated and studied in a rectangular Hele-Shaw cell filled with a dense but permeable two-dimensional granular layer. The model used, mixing highly deformable solid and fluid components, can simulate sedimentation problems [1,2], as well as hydrofracture or aerofracture ones. The emerging displacement patterns and fractures variate according to the properties of the injected fluid or gas and the characteristics of the granular phase [3]. The physics behind these variations is discussed and explained. The role of the fluid viscosity and system size shows to lead to a transition from fracturing to compaction, depending on the dynamics of convection versus diffusion of overpressure. The dependence of the obtained patterns on the injection pressure is also explored [4]. References: [1] Niebling, M.J., E.G. Flekkøy, K.J. Måløy, R. Toussaint, Sedimentation instabilities: impact of the fluid compressibility and viscosity, Phys. Rev. E 82, 051302, 2010. doi: 10.1103/PhysRevE.82.051302 [2] Niebling, M.J., E.G. Flekkøy, K.J. Måløy, R. Toussaint, Mixing of a granular layer falling through a fluid, Phys. Rev. E 82, 011301 (2010) doi: 10.1103/PhysRevE.82.011301 [3] Niebling, M., R. Toussaint, E.G. Flekk

  17. Cytological and histological correlation of granular cell tumor in a series of three cases

    Directory of Open Access Journals (Sweden)

    Soutrik Das

    2018-01-01

    Full Text Available Granular cell tumor (GCT is an uncommon soft tissue tumor characterized by proliferation of cells with granular eosinophilic cytoplasm. We came across three such tumors, one in the tongue, one in the chest wall, and one in the right deltoid region, which were referred for fine-needle aspiration cytology. On cytological examination, the first two cases were diagnosed as GCT, and the mass in deltoid region was suggestive of proliferative myositis. The cytological details of these cases are discussed. The excision biopsies of the first two cases and Tru-cut biopsy of the deltoid mass confirmed the diagnosis of GCT.

  18. Detection of antineutrophil cytoplasmic antibodies (ANCAs)

    DEFF Research Database (Denmark)

    Damoiseaux, Jan; Csernok, Elena; Rasmussen, Niels

    2017-01-01

    of diagnosis) from 251 patients with ANCA-associated vasculitis (AAV), including granulomatosis with polyangiitis and microscopic polyangiitis, and from 924 disease controls were tested for the presence of cytoplasmic pattern/perinuclear pattern and atypical ANCA (A-ANCA) by indirect immunofluorescence (IIF...

  19. Cellular Subcompartments through Cytoplasmic Streaming.

    Science.gov (United States)

    Pieuchot, Laurent; Lai, Julian; Loh, Rachel Ann; Leong, Fong Yew; Chiam, Keng-Hwee; Stajich, Jason; Jedd, Gregory

    2015-08-24

    Cytoplasmic streaming occurs in diverse cell types, where it generally serves a transport function. Here, we examine streaming in multicellular fungal hyphae and identify an additional function wherein regimented streaming forms distinct cytoplasmic subcompartments. In the hypha, cytoplasm flows directionally from cell to cell through septal pores. Using live-cell imaging and computer simulations, we identify a flow pattern that produces vortices (eddies) on the upstream side of the septum. Nuclei can be immobilized in these microfluidic eddies, where they form multinucleate aggregates and accumulate foci of the HDA-2 histone deacetylase-associated factor, SPA-19. Pores experiencing flow degenerate in the absence of SPA-19, suggesting that eddy-trapped nuclei function to reinforce the septum. Together, our data show that eddies comprise a subcellular niche favoring nuclear differentiation and that subcompartments can be self-organized as a consequence of regimented cytoplasmic streaming. Copyright © 2015 Elsevier Inc. All rights reserved.

  20. How granular vortices can help understanding rheological and mixing properties of dense granular flows

    Directory of Open Access Journals (Sweden)

    Rognon Pierre

    2017-01-01

    Full Text Available Dense granular flows exhibit fascinating kinematic patterns characterised by strong fluctuations in grain velocities. In this paper, we analyse these fluctuations and discuss their possible role on macroscopic properties such as effective viscosity, non-locality and shear-induced diffusion. The analysis is based on 2D experimental granular flows performed with the stadium shear device and DEM simulations. We first show that, when subjected to shear, grains self-organised into clusters rotating like rigid bodies. The average size of these so-called granular vortices is found to increase and diverge for lower inertial numbers, when flows decelerate and stop. We then discuss how such a microstructural entity and its associated internal length scale, possibly much larger than a grain, may be used to explain two important properties of dense granular flows: (i the existence of shear-induced diffusion of grains characterised by a shear-rate independent diffusivity and (ii the development of boundary layers near walls, where the viscosity is seemingly lower than the viscosity far from walls.

  1. Members of the HCMV US12 family of predicted heptaspanning membrane proteins have unique intracellular distributions, including association with the cytoplasmic virion assembly complex

    International Nuclear Information System (INIS)

    Das, Subhendu; Pellett, Philip E.

    2007-01-01

    The human cytomegalovirus (HCMV) US12 gene family is a group of 10 predicted seven-transmembrane domain proteins that have some features in common with G-protein-coupled receptors. Little is known of their patterns of expression, localization, or functional interactions. Here, we studied the intracellular localization of three US12 family members, US14, US17, and US18, with respect to various intracellular markers and the cytoplasmic virion assembly compartment (AC). The three proteins have distinct patterns of expression, which include associations with the AC. US14 is often distributed in a uniform granular manner throughout the cytoplasm, concentrating in the AC in some cells. US17 is expressed in a segmented manner, with its N-terminal domain localizing to the periphery of what we show here to be the AC and the C-terminal domain localizing to nuclei and the cytoplasm [Das, S., Skomorovska-Prokvolit, Y., Wang, F. Z., Pellett, P.E., 2006. Infection-dependent nuclear localization of US17, a member of the US12 family of human cytomegalovirus-encoded seven-transmembrane proteins. J. Virol. 80, 1191-1203]. Here, we show that the C-terminal domain is present at the center of the AC, in close association with markers of early endosomes; the N-terminal staining corresponds to an area stained by markers for the Golgi and trans-Golgi. US18 is distributed throughout the cytoplasm, concentrating in the AC at later stages of infection; it is localized more to the periphery of the AC than are US14 and US17C, in association with markers of the trans-Golgi. Although not detected in virions, their structures and localization in various zones within the AC suggest possible roles for these proteins in the process of virion maturation and egress

  2. Mechanics of Granular Materials : Constitutive Behavior and Pattern Transformation

    NARCIS (Netherlands)

    Göncü, F.

    2012-01-01

    From pharmaceutical to mining or traveling desert dunes to earthquakes, granular materials are at the heart of many industries and natural phenomena. Improving the efficiency of the machines handling them or, constructing safer buildings requires a critical understanding of their behavior. However,

  3. Nonlinear coherent structures in granular crystals

    Science.gov (United States)

    Chong, C.; Porter, Mason A.; Kevrekidis, P. G.; Daraio, C.

    2017-10-01

    The study of granular crystals, which are nonlinear metamaterials that consist of closely packed arrays of particles that interact elastically, is a vibrant area of research that combines ideas from disciplines such as materials science, nonlinear dynamics, and condensed-matter physics. Granular crystals exploit geometrical nonlinearities in their constitutive microstructure to produce properties (such as tunability and energy localization) that are not conventional to engineering materials and linear devices. In this topical review, we focus on recent experimental, computational, and theoretical results on nonlinear coherent structures in granular crystals. Such structures—which include traveling solitary waves, dispersive shock waves, and discrete breathers—have fascinating dynamics, including a diversity of both transient features and robust, long-lived patterns that emerge from broad classes of initial data. In our review, we primarily discuss phenomena in one-dimensional crystals, as most research to date has focused on such scenarios, but we also present some extensions to two-dimensional settings. Throughout the review, we highlight open problems and discuss a variety of potential engineering applications that arise from the rich dynamic response of granular crystals.

  4. Density-wave fronts on the brink of wet granular condensation

    Science.gov (United States)

    Huang, Kai; Zippelius, Andreas; Sand lab @ University of Bayreuth Team

    2017-11-01

    From sand dunes to Faraday heaping, driven granular matter, i.e., large agglomeration of macroscopic particles, is rich pattern forming system. When a granular material is partially wet (e.g., wet sand on the beach), a different pattern forming scenario arises due to the cohesive particle-particle interactions. Here, we focus on the formation of density-wave fronts in an oscillated wet granular layer undergoing a gas-liquid-like transition. The threshold of the instability is governed by the amplitude of the vertical vibrations. Fronts, which are curved into a spiral shape, propagate coherently along the circular rim of the container with leading edges. They are stable beyond a critical distance from the container center. Based on the measurement of the critical distance and the rotation frequency, we propose a model for the pattern formation by considering the competition between the time scale for the collapse of cohesive particles and that of the energy injection resisting this process. Deutsche Forschungsgemeinschaft (Grant No. HU1939 4-1).

  5. Granular flow

    DEFF Research Database (Denmark)

    Mitarai, Namiko; Nakanishi, Hiizu

    2012-01-01

    Granular material is a collection of macroscopic particles that are visible with naked eyes. The non-equilibrium nature of the granular materials makes their rheology quite different from that of molecular systems. In this minireview, we present the unique features of granular materials focusing...... on the shear flow of dry granular materials and granule-liquid mixture....

  6. Ulcerative Granular Cell Tumor: A Clinico pathological and Immunohistochemical Study

    International Nuclear Information System (INIS)

    El-Khalawan, M.; Mosbeh, A.; Abd-Al Salam, F.; Abou-Bakr, A.

    2011-01-01

    Granular cell tumor (GCT) is uncommonly presented with cutaneous ulcer. We examined the clinico pathological and immunohistochemical features of this ulcerative form in fourteen cases that may raise the awareness of this variant. The study included 11 males and 3 females with a mean age 31.5± 7.42 years. All cases were presented with large solitary ulcer with indurated base, elevated border, skin colored margin, and necrotic floor. Twelve lesions were located on the extremities and two lesions on the genital region. Histologically, the lesions showed dermal infiltrate composed of large polygonal cells with granular cytoplasm and characteristic infiltration of the dermal muscles in all cases. Immunostaining showed positive reaction for S100 (14/14), NSE (14/14), CD68 (5/14), and Vimentin (7/14) while HMB45, CK, EMA, and Desmin were negative. We hope that this paper increases the awareness of ulcerative GCT and consider it in the differential diagnosis of ulcerative lesions

  7. A constitutive law for dense granular flows.

    Science.gov (United States)

    Jop, Pierre; Forterre, Yoël; Pouliquen, Olivier

    2006-06-08

    A continuum description of granular flows would be of considerable help in predicting natural geophysical hazards or in designing industrial processes. However, the constitutive equations for dry granular flows, which govern how the material moves under shear, are still a matter of debate. One difficulty is that grains can behave like a solid (in a sand pile), a liquid (when poured from a silo) or a gas (when strongly agitated). For the two extreme regimes, constitutive equations have been proposed based on kinetic theory for collisional rapid flows, and soil mechanics for slow plastic flows. However, the intermediate dense regime, where the granular material flows like a liquid, still lacks a unified view and has motivated many studies over the past decade. The main characteristics of granular liquids are: a yield criterion (a critical shear stress below which flow is not possible) and a complex dependence on shear rate when flowing. In this sense, granular matter shares similarities with classical visco-plastic fluids such as Bingham fluids. Here we propose a new constitutive relation for dense granular flows, inspired by this analogy and recent numerical and experimental work. We then test our three-dimensional (3D) model through experiments on granular flows on a pile between rough sidewalls, in which a complex 3D flow pattern develops. We show that, without any fitting parameter, the model gives quantitative predictions for the flow shape and velocity profiles. Our results support the idea that a simple visco-plastic approach can quantitatively capture granular flow properties, and could serve as a basic tool for modelling more complex flows in geophysical or industrial applications.

  8. Dermatofibroma-like granular cell tumour: a potential diagnostic pitfall

    Directory of Open Access Journals (Sweden)

    Jiri Soukup

    2016-11-01

    Full Text Available Dermatofibroma-like granular cell tumour (GCT is a rare entity, with only two cases having been described so far. We report another case in a 62-year-old woman, discuss histopathological features, and review other tumours in which granular changes have been observed. Our tumour was composed predominantly of oval-to-spindle granular cells with prominent nucleoli, arranged in short fascicles and storiform pattern, infiltrating around collagen bundles. Immunohistochemical analysis with antibodies against CD31, CD56, CD68, CD117, S-100 protein, inhibin, calretinin, EMA, p53 and MIB-1 was performed, showing expression of CD56, CD68, S-100 protein, inhibin and calretinin. The diagnosis of atypical dermatofibroma-like GCT was made.

  9. Structural evolution of a granular medium during simultaneous penetration

    Science.gov (United States)

    González-Gutiérrez, Jorge; Carreón, Yojana J. P.; Moctezuma, R. E.

    2018-01-01

    Typically, fluidized beds are granular systems composed of solid particles through which a fluid flows. They are relevant to a wide variety of disciplines such as physics, chemistry, engineering, among others. Generally, the fluidized beds are characterized by different flow regimes such as particulate, bubbling, slugging, turbulent, fast fluidization, and pneumatic conveying. Here, we report the experimental study of the structural evolution of a granular system due to simultaneous penetration of intruders in the presence of an upward airflow. We found that the granular medium evolves from the static state to the turbulent regime showing the coexistence of three regions in different flow regimes. Interestingly, the cooperative dynamic of intruders correlate with the formation of such regions. As a non-invasive method, we use lacunarity and fractal dimension to quantitatively describe the patterns arising within the system during the different stages of the penetration process. Finally, we found that our results would allow us to relate the evolution of the visual patterns appearing in the process with different physical properties of the system.

  10. Measurements of granular flow dynamics with high speed digital images

    Energy Technology Data Exchange (ETDEWEB)

    Lee, Jingeol [Univ. of Florida, Gainesville, FL (United States)

    1994-01-01

    The flow of granular materials is common to many industrial processes. This dissertation suggests and validates image processing algorithms applied to high speed digital images to measure the dynamics (velocity, temperature and volume fraction) of dry granular solids flowing down an inclined chute under the action of gravity. Glass and acrylic particles have been used as granular solids in the experiment. One technique utilizes block matching for spatially averaged velocity measurements of the glass particles. This technique is compared with the velocity measurement using an optic probe which is a conventional granular flow velocity measurement device. The other technique for measuring the velocities of individual acrylic particles is developed with correspondence using a Hopfield network. This technique first locates the positions of particles with pattern recognition techniques, followed by a clustering technique, which produces point patterns. Also, several techniques are compared for particle recognition: synthetic discriminant function (SDF), minimum average correlation energy (MACE) filter, modified minimum average correlation energy (MMACE) filter and variance normalized correlation. The author proposes an MMACE filter which improves generalization of the MACE filter by adjusting the amount of averaged spectrum of training images in the spectrum whitening stages of the MACE filter. Variance normalized correlation is applied to measure the velocity and temperature of flowing glass particles down the inclined chute. The measurements are taken for the steady and wavy flow and qualitatively compared with a theoretical model of granular flow.

  11. Cahn-Hiliard theory for unstable granular fluids

    NARCIS (Netherlands)

    van Noije, T.P.C.; Ernst, M.H.

    A Cahn-Hilliard-type theory for hydrodynamic fluctuations is proposed that gives a quantitative description of the slowly evolving spatial correlations and structures in density and flow fields in the early stages of evolution of freely cooling granular fluids. Two mechanisms for pattern selection

  12. Immobilization Patterns and Dynamics of Acetate-Utilizing Methanogens Immobilized in Sterile Granular Sludge in Upflow Anaerobic Sludge Blanket Reactors

    Science.gov (United States)

    Schmidt, Jens Ejbye; Ahring, Birgitte Kjær

    1999-01-01

    Sterile granular sludge was inoculated with either Methanosarcina mazeii S-6, Methanosaeta concilii GP-6, or both species in acetate-fed upflow anaerobic sludge blanket (UASB) reactors to investigate the immobilization patterns and dynamics of aceticlastic methanogens in granular sludge. After several months of reactor operation, the methanogens were immobilized, either separately or together. The fastest immobilization was observed in the reactor containing M. mazeii S-6. The highest effluent concentration of acetate was observed in the reactor with only M. mazeii S-6 immobilized, while the lowest effluent concentration of acetate was observed in the reactor where both types of methanogens were immobilized together. No changes were observed in the kinetic parameters (Ks and μmax) of immobilized M. concilii GP-6 or M. mazeii S-6 compared with suspended cultures, indicating that immobilization does not affect the growth kinetics of these methanogens. An enzyme-linked immunosorbent assay using polyclonal antibodies against either M. concilii GP-6 or M. mazeii S-6 showed significant variations in the two methanogenic populations in the different reactors. Polyclonal antibodies were further used to study the spatial distribution of the two methanogens. M. concilii GP-6 was immobilized only on existing support material without any specific pattern. M. mazeii S-6, however, showed a different immobilization pattern: large clumps were formed when the concentration of acetate was high, but where the acetate concentration was low this strain was immobilized on support material as single cells or small clumps. The data clearly show that the two aceticlastic methanogens immobilize differently in UASB systems, depending on the conditions found throughout the UASB reactor. PMID:10049862

  13. Anticorpos contra o citoplasma de neutrófilos Antineutrophil cytoplasmic antibodies

    Directory of Open Access Journals (Sweden)

    Ari Stiel Radu

    2005-07-01

    Full Text Available A descoberta do marcador sorológico denominado anticorpo anticitoplasma de neutrófilos revolucionou o diagnóstico e o seguimento das vasculites pulmonares, especialmente da granulomatose de Wegener. Seu padrão pode ser citoplasmático e perinuclear. Sua titulação auxilia no diagnóstico e no seguimento das vasculites pulmonares.The discovery of the serological markers known as antineutrophil cytoplasmic antibodies revolutionized the diagnosis and follow-up treatment of the various forms of pulmonary vasculitis, especially that of Wegener's granulomatosis. The antineutrophil cytoplasmic antibodies pattern can be cytoplasmic or perinuclear. Determination of antineutrophil cytoplasmic antibodies titers aids the diagnosis and follow-up treatment of pulmonary vasculitis.

  14. Uptake and degradation of natural surfactant by isolated rat granular pneumocytes

    International Nuclear Information System (INIS)

    Fisher, A.B.; Chander, A.; Reicherter, J.

    1987-01-01

    It has been previously shown that isolated granular pneumocytes internalize and degrade dipalmitoylphosphatidylcholine (DPPC) in synthetic lipid vesicles and reutilize degradation products for phosphatidylcholine (PC) synthesis. In this study, the authors evaluated the uptake and degradation of radiolabeled natural surfactant (NS) isolated from lung lavage after perfusing isolated rat lungs with [ 3 H]choline. Uptake of NS by isolated granular pneumocytes was increased approximately fourfold compared with synthetic liposomes, suggesting that physical form or a component (e.g., a protein) of NS plays a role in phospholipid uptake by these cells. Uptake was significantly decreased by metabolic inhibitors, indicating an energy requirement for this process. After 2-h incubation, the pattern of radioactivity in cells compared with NS showed a significant decrease in PC and DSPC and increase in free choline, choline phosphate, and CDP-choline. This pattern of metabolism indicates degradation of PC and metabolic reutilization of products. These studies support the hypothesis that alveolar phospholipids are accumulated and reutilized by granular pneumocytes for surfactant synthesis

  15. Using a Time Granularity Table for Gradual Granular Data Aggregation

    DEFF Research Database (Denmark)

    Iftikhar, Nadeem; Pedersen, Torben Bach

    2010-01-01

    solution for data reduction based on gradual granular data aggregation. With the gradual granular data aggregation mechanism, older data can be made coarse-grained while keeping the newest data fine-grained. For instance, when data is 3 months old aggregate to 1 minute level from 1 second level, when data...... and improve query performance, especially on resource-constrained systems with limited storage and query processing capabilities. A number of data reduction solutions have been developed, however an effective solution particularly based on gradual data reduction is missing. This paper presents an effective...... is 6 months old aggregate to 2 minutes level from 1 minute level and so on. The proposed solution introduces a time granularity based data structure, namely a relational time granularity table that enables long term storage of old data by maintaining it at different levels of granularity and effective...

  16. Granular chaos and mixing: Whirled in a grain of sand

    Energy Technology Data Exchange (ETDEWEB)

    Shinbrot, Troy, E-mail: shinbrot@rutgers.edu [Department of Biomedical Engineering, Rutgers University, Piscataway, New Jersey 08854 (United States)

    2015-09-15

    In this paper, we overview examples of chaos in granular flows. We begin by reviewing several remarkable behaviors that have intrigued researchers over the past few decades, and we then focus on three areas in which chaos plays an intrinsic role in granular behavior. First, we discuss pattern formation in vibrated beds, which we show is a direct result of chaotic scattering combined with dynamical dissipation. Next, we consider stick-slip motion, which involves chaotic scattering on the micro-scale, and which results in complex and as yet unexplained peculiarities on the macro-scale. Finally, we examine granular mixing, which we show combines micro-scale chaotic scattering and macro-scale stick-slip motion into behaviors that are well described by dynamical systems tools, such as iterative mappings.

  17. Granular chaos and mixing: Whirled in a grain of sand.

    Science.gov (United States)

    Shinbrot, Troy

    2015-09-01

    In this paper, we overview examples of chaos in granular flows. We begin by reviewing several remarkable behaviors that have intrigued researchers over the past few decades, and we then focus on three areas in which chaos plays an intrinsic role in granular behavior. First, we discuss pattern formation in vibrated beds, which we show is a direct result of chaotic scattering combined with dynamical dissipation. Next, we consider stick-slip motion, which involves chaotic scattering on the micro-scale, and which results in complex and as yet unexplained peculiarities on the macro-scale. Finally, we examine granular mixing, which we show combines micro-scale chaotic scattering and macro-scale stick-slip motion into behaviors that are well described by dynamical systems tools, such as iterative mappings.

  18. Characterization of cytoplasmic male sterility of rice with Lead Rice cytoplasm in comparison with that with Chinsurah Boro II cytoplasm.

    Science.gov (United States)

    Itabashi, Etsuko; Kazama, Tomohiko; Toriyama, Kinya

    2009-02-01

    Rice with LD-type cytoplasmic male sterility (CMS) possesses the cytoplasm of 'Lead Rice' and its fertility is recovered by a nuclear fertility restorer gene Rf1. Rf1 promotes processing of a CMS-associated mitochondrial RNA of atp6-orf79, which consists of atp6 and orf79, in BT-CMS with the cytoplasm of 'Chinsurah Boro II'. In this study, we found that LD-cytoplasm contained a sequence variant of orf79 downstream of atp6. Northern blot analysis showed that atp6-orf79 RNA of LD-cytoplasm was co-transcribed and was processed in the presence of Rf1 in the same manner as in BT-cytoplasm. Western blot analysis showed that the ORF79 peptide did not accumulate in an LD-CMS line, while ORF79 accumulated in a BT-CMS line and was diminished by Rf1. These results suggest that accumulation of ORF79 is not the cause of CMS in LD-cytoplasm and the mechanism of male-sterility induction/fertility restoration in LD-CMS is different from that in BT-CMS.

  19. Granular computing: perspectives and challenges.

    Science.gov (United States)

    Yao, JingTao; Vasilakos, Athanasios V; Pedrycz, Witold

    2013-12-01

    Granular computing, as a new and rapidly growing paradigm of information processing, has attracted many researchers and practitioners. Granular computing is an umbrella term to cover any theories, methodologies, techniques, and tools that make use of information granules in complex problem solving. The aim of this paper is to review foundations and schools of research and to elaborate on current developments in granular computing research. We first review some basic notions of granular computing. Classification and descriptions of various schools of research in granular computing are given. We also present and identify some research directions in granular computing.

  20. Evaluating Energy Flux in Vibrofluidized Granular Bed

    Directory of Open Access Journals (Sweden)

    N. A. Sheikh

    2013-01-01

    Full Text Available Granular flows require sustained input of energy for fluidization. A level of fluidization depends on the amount of heat flux provided to the flow. In general, the dissipation of the grains upon interaction balances the heat inputs and the resultant flow patterns can be described using hydrodynamic models. However, with the increase in packing fraction, the heat fluxes prediction of the cell increases. Here, a comparison is made for the proposed theoretical models against the MD simulations data. It is observed that the variation of packing fraction in the granular cell influences the heat flux at the base. For the elastic grain-base interaction, the predictions vary appreciably compared to MD simulations, suggesting the need to accurately model the velocity distribution of grains for averaging.

  1. Kinetics of the association of dengue virus capsid protein with the granular component of nucleolus.

    Science.gov (United States)

    Tiwary, Ashish Kumar; Cecilia, D

    2017-02-01

    Dengue virus (DENV) replicates in the cytoplasm but translocation of the capsid protein (C) to the nucleoli of infected cells has been shown to facilitate virus multiplication for DENV-2. This study demonstrates that the nucleolar localization of C occurs with all four serotypes of DENV. The interaction of C with the nucleolus was found to be dynamic with a mobile fraction of 66% by FRAP. That the C shuttled between the nucleus and cytoplasm was suggested by FLIP and translation inhibition experiments. Colocalization with B23 indicated that DENV C targeted the granular component (GC) of the nucleolus. Presence of DENV C in the nucleolus affected the recovery kinetics of B23 in infected and transfected cells. Sub-nucleolar localization of DENV C of all serotypes to the GC, its mobility in and out of the nucleolus and its affect on the dynamics of B23 is being shown for the first time. Copyright © 2016 Elsevier Inc. All rights reserved.

  2. Template-controlled mineralization: Determining film granularity and structure by surface functionality patterns

    Directory of Open Access Journals (Sweden)

    Nina J. Blumenstein

    2015-08-01

    Full Text Available We present a promising first example towards controlling the properties of a self-assembling mineral film by means of the functionality and polarity of a substrate template. In the presented case, a zinc oxide film is deposited by chemical bath deposition on a nearly topography-free template structure composed of a pattern of two self-assembled monolayers with different chemical functionality. We demonstrate the template-modulated morphological properties of the growing film, as the surface functionality dictates the granularity of the growing film. This, in turn, is a key property influencing other film properties such as conductivity, piezoelectric activity and the mechanical properties. A very pronounced contrast is observed between areas with an underlying fluorinated, low energy template surface, showing a much more (almost two orders of magnitude coarse-grained film with a typical agglomerate size of around 75 nm. In contrast, amino-functionalized surface areas induce the growth of a very smooth, fine-grained surface with a roughness of around 1 nm. The observed influence of the template on the resulting clear contrast in morphology of the growing film could be explained by a contrast in surface adhesion energies and surface diffusion rates of the nanoparticles, which nucleate in solution and subsequently deposit on the functionalized substrate.

  3. Spatial patterns of FUS-immunoreactive neuronal cytoplasmic inclusions (NCI) in neuronal intermediate filament inclusion disease (NIFID).

    Science.gov (United States)

    Armstrong, Richard A; Gearing, Marla; Bigio, Eileen H; Cruz-Sanchez, Felix F; Duyckaerts, Charles; Mackenzie, Ian R A; Perry, Robert H; Skullerud, Kari; Yokoo, Hideaki; Cairns, Nigel J

    2011-11-01

    Neuronal intermediate filament inclusion disease (NIFID), a rare form of frontotemporal lobar degeneration (FTLD), is characterized neuropathologically by focal atrophy of the frontal and temporal lobes, neuronal loss, gliosis, and neuronal cytoplasmic inclusions (NCI) containing epitopes of ubiquitin and neuronal intermediate filament (IF) proteins. Recently, the 'fused in sarcoma' (FUS) protein (encoded by the FUS gene) has been shown to be a component of the inclusions of NIFID. To further characterize FUS proteinopathy in NIFID, we studied the spatial patterns of the FUS-immunoreactive NCI in frontal and temporal cortex of 10 cases. In the cerebral cortex, sectors CA1/2 of the hippocampus, and the dentate gyrus (DG), the FUS-immunoreactive NCI were frequently clustered and the clusters were regularly distributed parallel to the tissue boundary. In a proportion of cortical gyri, cluster size of the NCI approximated to those of the columns of cells was associated with the cortico-cortical projections. There were no significant differences in the frequency of different types of spatial patterns with disease duration or disease stage. Clusters of NCI in the upper and lower cortex were significantly larger using FUS compared with phosphorylated, neurofilament heavy polypeptide (NEFH) or α-internexin (INA) immunohistochemistry (IHC). We concluded: (1) FUS-immunoreactive NCI exhibit similar spatial patterns to analogous inclusions in the tauopathies and synucleinopathies, (2) clusters of FUS-immunoreactive NCI are larger than those revealed by NEFH or ΙΝΑ, and (3) the spatial patterns of the FUS-immunoreactive NCI suggest the degeneration of the cortico-cortical projections in NIFID.

  4. Pediatric Inflammatory Bowel Disease with Cytoplasmic Staining of Antineutrophil Cytoplasmic Antibodies

    Directory of Open Access Journals (Sweden)

    Omar I. Saadah

    2013-01-01

    Full Text Available Background. It is unusual for the antineutrophil cytoplasmic antibody with cytoplasmic pattern (cANCA to present in patients with inflammatory bowel disease (IBD without vasculitis. The purpose of this study was to describe the occurrence and characteristics of pediatrics IBD with cANCA. Methods. A retrospective review of pediatric IBD associated with cANCA serology in patients from King Abdulaziz University Hospital, Saudi Arabia, between September 2002 and February 2012. Results. Out of 131 patients with IBD screened for cANCAs, cANCA was positive in 7 (5.3% patients of whom 4 had ulcerative colitis and 3 had Crohn's disease. The median age was 8.8 years (2–14.8 years. Six (86% were males. Of the 7 patients, 5 (71% were Saudi Arabians and 2 were of Indian ethnicity. The most common symptoms were diarrhea, abdominal pain, weight loss, and rectal bleeding. None had family history or clinical features suggestive of vasculitis involving renal and respiratory systems. No difference in the disease location or severity was observed between cANCA positive and cANCA negative patients apart from male preponderance in cANCA positive patients. Conclusion. The occurrence of cANCA in pediatric IBD is rare. Apart from male preponderance, there were no peculiar characteristics for the cANCA positive patients.

  5. Cytoplasmic Control of Sense-Antisense mRNA Pairs

    Directory of Open Access Journals (Sweden)

    Flore Sinturel

    2015-09-01

    Full Text Available Transcriptome analyses have revealed that convergent gene transcription can produce many 3′-overlapping mRNAs in diverse organisms. Few studies have examined the fate of 3′-complementary mRNAs in double-stranded RNA-dependent nuclear phenomena, and nothing is known about the cytoplasmic destiny of 3′-overlapping messengers or their impact on gene expression. Here, we demonstrate that the complementary tails of 3′-overlapping mRNAs can interact in the cytoplasm and promote post-transcriptional regulatory events including no-go decay (NGD in Saccharomyces cerevisiae. Genome-wide experiments confirm that these messenger-interacting mRNAs (mimRNAs form RNA duplexes in wild-type cells and thus have potential roles in modulating the mRNA levels of their convergent gene pattern under different growth conditions. We show that the post-transcriptional fate of hundreds of mimRNAs is controlled by Xrn1, revealing the extent to which this conserved 5′-3′ cytoplasmic exoribonuclease plays an unexpected but key role in the post-transcriptional control of convergent gene expression.

  6. Cytoplasmic Control of Sense-Antisense mRNA Pairs.

    Science.gov (United States)

    Sinturel, Flore; Navickas, Albertas; Wery, Maxime; Descrimes, Marc; Morillon, Antonin; Torchet, Claire; Benard, Lionel

    2015-09-22

    Transcriptome analyses have revealed that convergent gene transcription can produce many 3'-overlapping mRNAs in diverse organisms. Few studies have examined the fate of 3'-complementary mRNAs in double-stranded RNA-dependent nuclear phenomena, and nothing is known about the cytoplasmic destiny of 3'-overlapping messengers or their impact on gene expression. Here, we demonstrate that the complementary tails of 3'-overlapping mRNAs can interact in the cytoplasm and promote post-transcriptional regulatory events including no-go decay (NGD) in Saccharomyces cerevisiae. Genome-wide experiments confirm that these messenger-interacting mRNAs (mimRNAs) form RNA duplexes in wild-type cells and thus have potential roles in modulating the mRNA levels of their convergent gene pattern under different growth conditions. We show that the post-transcriptional fate of hundreds of mimRNAs is controlled by Xrn1, revealing the extent to which this conserved 5'-3' cytoplasmic exoribonuclease plays an unexpected but key role in the post-transcriptional control of convergent gene expression. Copyright © 2015 The Authors. Published by Elsevier Inc. All rights reserved.

  7. Cytoplasmic streaming in plant cells emerges naturally by microfilament self-organization.

    Science.gov (United States)

    Woodhouse, Francis G; Goldstein, Raymond E

    2013-08-27

    Many cells exhibit large-scale active circulation of their entire fluid contents, a process termed cytoplasmic streaming. This phenomenon is particularly prevalent in plant cells, often presenting strikingly regimented flow patterns. The driving mechanism in such cells is known: myosin-coated organelles entrain cytoplasm as they process along actin filament bundles fixed at the periphery. Still unknown, however, is the developmental process that constructs the well-ordered actin configurations required for coherent cell-scale flow. Previous experimental works on streaming regeneration in cells of Characean algae, whose longitudinal flow is perhaps the most regimented of all, hint at an autonomous process of microfilament self-organization driving the formation of streaming patterns during morphogenesis. Working from first principles, we propose a robust model of streaming emergence that combines motor dynamics with both microscopic and macroscopic hydrodynamics to explain how several independent processes, each ineffectual on its own, can reinforce to ultimately develop the patterns of streaming observed in the Characeae and other streaming species.

  8. Granular gas dynamics

    CERN Document Server

    Brilliantov, Nikolai

    2003-01-01

    While there is not yet any general theory for granular materials, significant progress has been achieved for dilute systems, also called granular gases. The contributions in this book address both the kinetic approach one using the Boltzmann equation for dissipative gases as well as the less established hydrodynamic description. The last part of the book is devoted to driven granular gases and their analogy with molecular fluids. Care has been taken so as to present the material in a pedagogical and self-contained way and this volume will thus be particularly useful to nonspecialists and newcomers to the field.

  9. Spreading of a granular droplet

    Science.gov (United States)

    Clement, Eric; Sanchez, Ivan; Raynaud, Franck; Lanuza, Jose; Andreotti, Bruno; Aranson, Igor

    2008-03-01

    The influence of controlled vibrations on the granular rheology is investigated in a specifically designed experiment in which a granular film spreads under the action of horizontal vibrations. A nonlinear diffusion equation is derived theoretically that describes the evolution of the deposit shape. A self-similar parabolic shape (the``granular droplet'') and a spreading dynamics are predicted that both agree quantitatively with the experimental results. The theoretical analysis is used to extract effective friction coefficients between the base and the granular layer under sustained and controlled vibrations. A shear thickening regime characteristic of dense granular flows is evidenced at low vibration energy, both for glass beads and natural sand. Conversely, shear thinning is observed at high agitation.

  10. Chip-scale pattern modification method for equalizing residual layer thickness in nanoimprint lithography

    Science.gov (United States)

    Youn, Sung-Won; Suzuki, Kenta; Hiroshima, Hiroshi

    2018-06-01

    A software program for modifying a mold design to obtain a uniform residual layer thickness (RLT) distribution has been developed and its validity was verified by UV-nanoimprint lithography (UV-NIL) simulation. First, the effects of granularity (G) on both residual layer uniformity and filling characteristics were characterized. For a constant complementary pattern depth and a granularity that was sufficiently larger than the minimum pattern width, filling time decreased with the decrease in granularity. For a pattern design with a wide density range and an irregular distribution, the choice of a small granularity was not always a good strategy since the etching depth required for a complementary pattern occasionally exceptionally increased with the decrease in granularity. On basis of the results obtained, the automated method was applied to a chip-scale pattern modification. Simulation results showed a marked improvement in residual layer thickness uniformity for a capacity-equalized (CE) mold. For the given conditions, the standard deviation of RLT decreased in the range from 1/3 to 1/5 in accordance with pattern designs.

  11. Type-2 fuzzy granular models

    CERN Document Server

    Sanchez, Mauricio A; Castro, Juan R

    2017-01-01

    In this book, a series of granular algorithms are proposed. A nature inspired granular algorithm based on Newtonian gravitational forces is proposed. A series of methods for the formation of higher-type information granules represented by Interval Type-2 Fuzzy Sets are also shown, via multiple approaches, such as Coefficient of Variation, principle of justifiable granularity, uncertainty-based information concept, and numerical evidence based. And a fuzzy granular application comparison is given as to demonstrate the differences in how uncertainty affects the performance of fuzzy information granules.

  12. Hydrodynamic property of the cytoplasm is sufficient to mediate cytoplasmic streaming in the Caenorhabiditis elegans embryo

    Science.gov (United States)

    Niwayama, Ritsuya; Shinohara, Kyosuke; Kimura, Akatsuki

    2011-01-01

    Cytoplasmic streaming is a type of intracellular transport widely seen in nature. Cytoplasmic streaming in Caenorhabditis elegans at the one-cell stage is bidirectional; the flow near the cortex (“cortical flow”) is oriented toward the anterior, whereas the flow in the central region (“cytoplasmic flow”) is oriented toward the posterior. Both cortical flow and cytoplasmic flow depend on non-muscle-myosin II (NMY-2), which primarily localizes in the cortex. The manner in which NMY-2 proteins drive cytoplasmic flow in the opposite direction from remote locations has not been fully understood. In this study, we demonstrated that the hydrodynamic properties of the cytoplasm are sufficient to mediate the forces generated by the cortical myosin to drive bidirectional streaming throughout the cytoplasm. We quantified the flow velocities of cytoplasmic streaming using particle image velocimetry (PIV) and conducted a three-dimensional hydrodynamic simulation using the moving particle semiimplicit method. Our simulation quantitatively reconstructed the quantified flow velocity distribution resolved through PIV analysis. Furthermore, our PIV analyses detected microtubule-dependent flows during the pronuclear migration stage. These flows were reproduced via hydrodynamic interactions between moving pronuclei and the cytoplasm. The agreement of flow dynamics in vivo and in simulation indicates that the hydrodynamic properties of the cytoplasm are sufficient to mediate cytoplasmic streaming in C. elegans embryos. PMID:21730185

  13. Constructing fine-granularity functional brain network atlases via deep convolutional autoencoder.

    Science.gov (United States)

    Zhao, Yu; Dong, Qinglin; Chen, Hanbo; Iraji, Armin; Li, Yujie; Makkie, Milad; Kou, Zhifeng; Liu, Tianming

    2017-12-01

    State-of-the-art functional brain network reconstruction methods such as independent component analysis (ICA) or sparse coding of whole-brain fMRI data can effectively infer many thousands of volumetric brain network maps from a large number of human brains. However, due to the variability of individual brain networks and the large scale of such networks needed for statistically meaningful group-level analysis, it is still a challenging and open problem to derive group-wise common networks as network atlases. Inspired by the superior spatial pattern description ability of the deep convolutional neural networks (CNNs), a novel deep 3D convolutional autoencoder (CAE) network is designed here to extract spatial brain network features effectively, based on which an Apache Spark enabled computational framework is developed for fast clustering of larger number of network maps into fine-granularity atlases. To evaluate this framework, 10 resting state networks (RSNs) were manually labeled from the sparsely decomposed networks of Human Connectome Project (HCP) fMRI data and 5275 network training samples were obtained, in total. Then the deep CAE models are trained by these functional networks' spatial maps, and the learned features are used to refine the original 10 RSNs into 17 network atlases that possess fine-granularity functional network patterns. Interestingly, it turned out that some manually mislabeled outliers in training networks can be corrected by the deep CAE derived features. More importantly, fine granularities of networks can be identified and they reveal unique network patterns specific to different brain task states. By further applying this method to a dataset of mild traumatic brain injury study, it shows that the technique can effectively identify abnormal small networks in brain injury patients in comparison with controls. In general, our work presents a promising deep learning and big data analysis solution for modeling functional connectomes, with

  14. Circulating microRNA expression pattern separates patients with anti-neutrophil cytoplasmic antibody-associated vasculitis from healthy controls

    DEFF Research Database (Denmark)

    Skoglund, C.; Carlsen, A.; Weiner, M.

    2015-01-01

    patients from healthy subjects as well as from renal transplant recipients. Loadings plots indicated similar contribution of the same miRNAs in both cohorts to the PCA. Renal engagement was important for miRNA expression but consistent correlations between estimated glomerular filtration rate and mi......Objective. Antineutrophil cytoplasmic antibody-associated vasculitis (AAV) has an unpredictable course and better biomarkers are needed. Micro-RNAs in body fluids are protected from degradation and might be used as biomarkers for diagnosis and prognosis, here we explore the potential in AAV...... individual miRNAs were differently expressed compared to controls in both cohorts; miR-29a, -34a, -142-3p and -383 were up-regulated and miR-20a, -92a and -221 were down-regulated. Cluster analysis as well as principal component analysis (PCA) indicated that patterns of miRNA expression differentiate AAV...

  15. Wrinkles, folds, and plasticity in granular rafts

    Science.gov (United States)

    Jambon-Puillet, Etienne; Josserand, Christophe; Protière, Suzie

    2017-09-01

    We investigate the mechanical response of a compressed monolayer of large and dense particles at a liquid-fluid interface: a granular raft. Upon compression, rafts first wrinkle; then, as the confinement increases, the deformation localizes in a unique fold. This characteristic buckling pattern is usually associated with floating elastic sheets, and as a result, particle laden interfaces are often modeled as such. Here, we push this analogy to its limits by comparing quantitative measurements of the raft morphology to a theoretical continuous elastic model of the interface. We show that, although powerful to describe the wrinkle wavelength, the wrinkle-to-fold transition, and the fold shape, this elastic description does not capture the finer details of the experiment. We describe an unpredicted secondary wavelength, a compression discrepancy with the model, and a hysteretic behavior during compression cycles, all of which are a signature of the intrinsic discrete and frictional nature of granular rafts. It suggests also that these composite materials exhibit both plastic transition and jamming dynamics.

  16. Mathematical models of granular matter

    CERN Document Server

    Mariano, Paolo; Giovine, Pasquale

    2008-01-01

    Granular matter displays a variety of peculiarities that distinguish it from other appearances studied in condensed matter physics and renders its overall mathematical modelling somewhat arduous. Prominent directions in the modelling granular flows are analyzed from various points of view. Foundational issues, numerical schemes and experimental results are discussed. The volume furnishes a rather complete overview of the current research trends in the mechanics of granular matter. Various chapters introduce the reader to different points of view and related techniques. New models describing granular bodies as complex bodies are presented. Results on the analysis of the inelastic Boltzmann equations are collected in different chapters. Gallavotti-Cohen symmetry is also discussed.

  17. Why granular media are thermal after all

    Science.gov (United States)

    Liu, Mario; Jiang, Yimin

    2017-06-01

    Two approaches exist to account for granular behavior. The thermal one considers the total entropy, which includes microscopic degrees of freedom such as phonons; the athermal one (as with the Edward entropy) takes grains as elementary. Granular solid hydrodynamics (GSH) belongs to the first, DEM, granular kinetic theory and athermal statistical mechanics (ASM) to the second. A careful discussion of their conceptual differences is given here. Three noteworthy insights or results are: (1) While DEM and granular kinetic theory are well justified to take grains as elementary, any athermal entropic consideration is bound to run into trouble. (2) Many general principles are taken as invalid in granular media. Yet within the thermal approach, energy conservation and fluctuation-dissipation theorem remain valid, granular temperatures equilibrate, and phase space is well explored in a grain at rest. Hence these are abnormalities of the athermal approximation, not of granular media as such. (3) GSH is a wide-ranged continuum mechanical description of granular dynamics.

  18. Recent advances in understanding deformation and flow of granular matter

    Directory of Open Access Journals (Sweden)

    Mesarović Siniša Đ.

    2014-01-01

    Full Text Available By means of graph theory, we analyze the changes in topology of a granular assembly during deformation. The elementary mechanism of diffuse deformation consists of intermittent flips. We show that dilatancy is the direct result of: an increasing number of flips, and, elastic relaxation of particles upon flips. Both are dependent on particles' elastic potential energy prior to flip and after the flip. The latter is the result of non uniform distribution of interparticle forces in force chains. Next, we consider shear bands in granular materials. Formation of shear bands is accompanied by accompanied by massive rolling of particle. Since rolling is constrained by neighbors, a characteristic rolling correlation length appears. The transmission of rotations in a particular direction depends on the strength of the force chain branches in the direction of propagation and across. The maximum propagation distance is comparable to observed widths of shear bands. Finally, we turn to the question of vortex formation within shear bands and argue that vortex pattern minimizes the dissipation/resistance in granular fluid.

  19. Mechanisms for cytoplasmic organization: an overview.

    Science.gov (United States)

    Pagliaro, L

    2000-01-01

    One of the basic characteristics of life is the intrinsic organization of cytoplasm, yet we know surprisingly little about the manner in which cytoplasmic macromolecules are arranged. It is clear that cytoplasm is not the homogeneous "soup" it was once envisioned to be, but a comprehensive model for cytoplasmic organization is not available in modern cell biology. The premise of this volume is that phase separation in cytoplasm may play a role in organization at the subcellular level. Other mechanisms for non-membrane-bounded intracellular organization have previously been proposed. Some of these will be reviewed in this chapter. Multiple mechanisms, involving phase separation, specific intracellular targeting, formation of macromolecular complexes, and channeling, all could well contribute to cytoplasmic organization. Temporal and spatial organization, as well as composition, are likely to be important in defining the characteristics of cytoplasm.

  20. Flow and fracture in water-saturated, unconstrained granular beds

    Directory of Open Access Journals (Sweden)

    Germán eVaras

    2015-06-01

    Full Text Available The injection of gas in a liquid-saturated granular bed gives rise to a wide variety of invasion patterns. Many studies have focused on constrained porous media, in which the grains are fixed in the bed and only the interstitial fluid flows when the gas invades the system. With a free upper boundary, however, the grains can be entrained by the ascending gas or fluid motion, and the competition between the upward motion of grains and sedimentation leads to new patterns. We propose a brief review of the experimental investigation of the dynamics of air rising through a water-saturated, unconstrained granular bed, in both two and three dimensions. After describing the invasion pattern at short and long time, a tentative regime-diagram is proposed. We report original results showing a dependence of the fluidized zone shape, at long times, on the injection flow rate and grain size. A method based on image analysis makes it possible to detect not only the fluidized zone profile in the stationary regime, but also to follow the transient dynamics of its formation. Finally, we describe the degassing dynamics inside the fluidized zone, in the stationary regime. Depending on the experimental conditions, regular bubbling, continuous degassing, intermittent regime or even spontaneous flow-to-fracture transition are observed.

  1. Impact Compaction of a Granular Material

    Science.gov (United States)

    Fenton, Gregg; Asay, Blaine; Todd, Steve; Grady, Dennis

    2017-06-01

    The dynamic behavior of granular materials has importance to a variety of engineering applications. Although, the mechanical behavior of granular materials have been studied extensively for several decades, the dynamic behavior of these materials remains poorly understood. High-quality experimental data are needed to improve our general understanding of granular material compaction physics. This paper describes how an instrumented plunger impact system can be used to measure the compaction process for granular materials at high and controlled strain rates and subsequently used for computational modelling. The experimental technique relies on a gas-gun driven plunger system to generate a compaction wave through a volume of granular material. This volume of material has been redundantly instrumented along the bed length to track the progression of the compaction wave, and the piston displacement is measured with Photon Doppler Velocimetry (PDV). Using the gathered experimental data along with the initial material tap density, a granular material equation of state can be determined.

  2. Granular flows: fundamentals and applications

    Science.gov (United States)

    Cleary, Paul W.

    DEM allows the prediction of complex industrial and geophysical particle flows. The importance of particle shape is demonstrated through a series of simple examples. Shape controls resistance to shear, the magnitude of collision stress, dilation and the angle of repose. We use a periodic flow of a bed of particles to demonstrate the different states of granular matter, the generation of dilute granular flow when granular temperature is high and the flow dependent nature of the granular thermodynamic boundary conditions. A series of industrial case studies examines how DEM can be used to understand and improve processes such as separation, mixing, grinding, excavation, hopper discharge, metering and conveyor interchange. Finally, an example of landslide motion over real topography is presented.

  3. Granular flows in constrained geometries

    Science.gov (United States)

    Murthy, Tejas; Viswanathan, Koushik

    Confined geometries are widespread in granular processing applications. The deformation and flow fields in such a geometry, with non-trivial boundary conditions, determine the resultant mechanical properties of the material (local porosity, density, residual stresses etc.). We present experimental studies of deformation and plastic flow of a prototypical granular medium in different nontrivial geometries- flat-punch compression, Couette-shear flow and a rigid body sliding past a granular half-space. These geometries represent simplified scaled-down versions of common industrial configurations such as compaction and dredging. The corresponding granular flows show a rich variety of flow features, representing the entire gamut of material types, from elastic solids (beam buckling) to fluids (vortex-formation, boundary layers) and even plastically deforming metals (dead material zone, pile-up). The effect of changing particle-level properties (e.g., shape, size, density) on the observed flows is also explicitly demonstrated. Non-smooth contact dynamics particle simulations are shown to reproduce some of the observed flow features quantitatively. These results showcase some central challenges facing continuum-scale constitutive theories for dynamic granular flows.

  4. Granular boycott effect: How to mix granulates

    Science.gov (United States)

    Duran, J.; Mazozi, T.

    1999-11-01

    Granular material can display the basic features of the Boycott effect in sedimentation. A simple experiment shows that granular material falls faster in an inclined tube than in a vertical tube, in analogy with the Boycott effect. As long as the inclination of the tube is above the avalanche threshold, descent of granular material in the tube causes internal convection which in turn results in an efficient mixture of the granular components. By contrast, as in analogous experiments in two dimensions, a vertical fall of granular material occurs via successive block fragmentation, resulting in poor mixing.

  5. Lizard locomotion in heterogeneous granular media

    Science.gov (United States)

    Schiebel, Perrin; Goldman, Daniel

    2014-03-01

    Locomotion strategies in heterogeneous granular environments (common substrates in deserts), are relatively unexplored. The zebra-tailed lizard (C. draconoides) is a useful model organism for such studies owing to its exceptional ability to navigate a variety of desert habitats at impressive speed (up to 50 body-lengths per second) using both quadrapedal and bidepal gaits. In laboratory experiments, we challenge the lizards to run across a field of boulders (2.54 cm diameter glass spheres or 3.8 cm 3D printed spheres) placed in a lattice pattern and embedded in a loosely packed granular medium of 0.3 mm diameter glass particles. Locomotion kinematics of the lizard are recorded using high speed cameras, with and without the scatterers. The data reveals that unlike the lizard's typical quadrupedal locomotion using a diagonal gait, when scatterers are present the lizard is most successful when using a bipedal gait, with a raised center of mass (CoM). We propose that the kinematics of bipedal running in conjunction with the lizard's long toes and compliant hind foot are the keys to this lizard's successful locomotion in the presence of such obstacles. NSF PoLS

  6. DEM study of granular flow around blocks attached to inclined walls

    Science.gov (United States)

    Samsu, Joel; Zhou, Zongyan; Pinson, David; Chew, Sheng

    2017-06-01

    Damage due to intense particle-wall contact in industrial applications can cause severe problems in industries such as mineral processing, mining and metallurgy. Studying the flow dynamics and forces on containing walls can provide valuable feedback for equipment design and optimising operations to prolong the equipment lifetime. Therefore, solids flow-wall interaction phenomena, i.e. induced wall stress and particle flow patterns should be well understood. In this work, discrete element method (DEM) is used to study steady state granular flow in a gravity-fed hopper like geometry with blocks attached to an inclined wall. The effects of different geometries, e.g. different wall angles and spacing between blocks are studied by means of a 3D DEM slot model with periodic boundary conditions. The findings of this work include (i) flow analysis in terms of flow patterns and particle velocities, (ii) force distributions within the model geometry, and (iii) wall stress vs. model height diagrams. The model enables easy transfer of the key findings to other industrial applications handling granular materials.

  7. DEM study of granular flow around blocks attached to inclined walls

    Directory of Open Access Journals (Sweden)

    Samsu Joel

    2017-01-01

    Full Text Available Damage due to intense particle-wall contact in industrial applications can cause severe problems in industries such as mineral processing, mining and metallurgy. Studying the flow dynamics and forces on containing walls can provide valuable feedback for equipment design and optimising operations to prolong the equipment lifetime. Therefore, solids flow-wall interaction phenomena, i.e. induced wall stress and particle flow patterns should be well understood. In this work, discrete element method (DEM is used to study steady state granular flow in a gravity-fed hopper like geometry with blocks attached to an inclined wall. The effects of different geometries, e.g. different wall angles and spacing between blocks are studied by means of a 3D DEM slot model with periodic boundary conditions. The findings of this work include (i flow analysis in terms of flow patterns and particle velocities, (ii force distributions within the model geometry, and (iii wall stress vs. model height diagrams. The model enables easy transfer of the key findings to other industrial applications handling granular materials.

  8. Settling properties of aerobic granular sludge (AGS) and aerobic granular sludge molasses (AGSM)

    Science.gov (United States)

    Mat Saad, Azlina; Aini Dahalan, Farrah; Ibrahim, Naimah; Yasina Yusuf, Sara; Aqlima Ahmad, Siti; Khalil, Khalilah Abdul

    2018-03-01

    Aerobic granulation technology is applied to treat domestic and industrial wastewater. The Aerobic granular sludge (AGS) cultivated has strong properties that appears to be denser and compact in physiological structure compared to the conventional activated sludge. It offers rapid settling for solid:liquid separation in wastewater treatment. Aerobic granules were developed using sequencing batch reactor (SBR) with intermittent aerobic - anaerobic mode with 8 cycles in 24 hr. This study examined the settling velocity performance of cultivated aerobic granular sludge (AGS) and aerobic granular sludge molasses (AGSM). The elemental composition in both AGS and AGSM were determined using X-ray fluorescence (XRF). The results showed that AGSM has higher settling velocity 30.5 m/h compared to AGS.

  9. Uniform shock waves in disordered granular matter

    NARCIS (Netherlands)

    Gómez, L.R.; Turner, A.M.; Vitelli, V.

    2012-01-01

    The confining pressure P is perhaps the most important parameter controlling the properties of granular matter. Strongly compressed granular media are, in many respects, simple solids in which elastic perturbations travel as ordinary phonons. However, the speed of sound in granular aggregates

  10. Pneumatic fractures in Confined Granular Media

    Science.gov (United States)

    Eriksen, Fredrik K.; Toussaint, Renaud; Jørgen Måløy, Knut; Grude Flekkøy, Eirik; Turkaya, Semih

    2016-04-01

    We will present our ongoing study of the patterns formed when air flows into a dry, non-cohesive porous medium confined in a horizontal Hele-Shaw cell. This is an optically transparent system consisting of two glass plates separated by 0.5 to 1 mm, containing a packing of dry 80 micron beads in between. The cell is rectangular and has an air-permeable boundary (blocking beads) at one short edge, while the other three edges are completely sealed. The granular medium is loosely packed against the semi-permeable boundary and fills about 80 % of the cell volume. This leaves an empty region at the sealed side, where an inlet allows us to set and maintain the air at a constant overpressure (0.1 - 2 bar). For the air trapped inside the cell to relax its overpressure it has to move through the deformable granular medium. Depending on the applied overpressure and initial density of the medium, we observe a range of different behaviors such as seepage through the pore-network with or without an initial compaction of the solid, formation of low density bubbles with rearrangement of particles, granular fingering/fracturing, and erosion inside formed channels/fractures. The experiments are recorded with a high-speed camera at a framerate of 1000 images/s and a resolution of 1024x1024 pixels. We use various image processing techniques to characterize the evolution of the air invasion patterns and the deformations in the surrounding material. The experiments are similar to deformation processes in porous media which are driven by pore fluid overpressure, such as mud volcanoes and hydraulic or pneumatic (gas-induced) fracturing, and the motivation is to increase the understanding of such processes by optical observations. In addition, this setup is an experimental version of the numerical models analyzed by Niebling et al. [1,2], and is useful for comparison with their results. In a directly related project [3], acoustic emissions from the cell plate are recorded during

  11. Granular packing as model glass formers

    International Nuclear Information System (INIS)

    Wang Yujie

    2017-01-01

    Static granular packings are model hard-sphere glass formers. The nature of glass transition has remained a hotly debated issue. We review recent experimental progresses in using granular materials to study glass transitions. We focus on the growth of glass order with five-fold symmetry in granular packings and relate the findings to both geometric frustration and random first-order phase transition theories. (paper)

  12. Continuum modelling of segregating tridisperse granular chute flow

    Science.gov (United States)

    Deng, Zhekai; Umbanhowar, Paul B.; Ottino, Julio M.; Lueptow, Richard M.

    2018-03-01

    Segregation and mixing of size multidisperse granular materials remain challenging problems in many industrial applications. In this paper, we apply a continuum-based model that captures the effects of segregation, diffusion and advection for size tridisperse granular flow in quasi-two-dimensional chute flow. The model uses the kinematics of the flow and other physical parameters such as the diffusion coefficient and the percolation length scale, quantities that can be determined directly from experiment, simulation or theory and that are not arbitrarily adjustable. The predictions from the model are consistent with experimentally validated discrete element method (DEM) simulations over a wide range of flow conditions and particle sizes. The degree of segregation depends on the Péclet number, Pe, defined as the ratio of the segregation rate to the diffusion rate, the relative segregation strength κij between particle species i and j, and a characteristic length L, which is determined by the strength of segregation between smallest and largest particles. A parametric study of particle size, κij, Pe and L demonstrates how particle segregation patterns depend on the interplay of advection, segregation and diffusion. Finally, the segregation pattern is also affected by the velocity profile and the degree of basal slip at the chute surface. The model is applicable to different flow geometries, and should be easily adapted to segregation driven by other particle properties such as density and shape.

  13. Bayesian Inference of Forces Causing Cytoplasmic Streaming in Caenorhabditis elegans Embryos and Mouse Oocytes.

    Science.gov (United States)

    Niwayama, Ritsuya; Nagao, Hiromichi; Kitajima, Tomoya S; Hufnagel, Lars; Shinohara, Kyosuke; Higuchi, Tomoyuki; Ishikawa, Takuji; Kimura, Akatsuki

    2016-01-01

    Cellular structures are hydrodynamically interconnected, such that force generation in one location can move distal structures. One example of this phenomenon is cytoplasmic streaming, whereby active forces at the cell cortex induce streaming of the entire cytoplasm. However, it is not known how the spatial distribution and magnitude of these forces move distant objects within the cell. To address this issue, we developed a computational method that used cytoplasm hydrodynamics to infer the spatial distribution of shear stress at the cell cortex induced by active force generators from experimentally obtained flow field of cytoplasmic streaming. By applying this method, we determined the shear-stress distribution that quantitatively reproduces in vivo flow fields in Caenorhabditis elegans embryos and mouse oocytes during meiosis II. Shear stress in mouse oocytes were predicted to localize to a narrower cortical region than that with a high cortical flow velocity and corresponded with the localization of the cortical actin cap. The predicted patterns of pressure gradient in both species were consistent with species-specific cytoplasmic streaming functions. The shear-stress distribution inferred by our method can contribute to the characterization of active force generation driving biological streaming.

  14. Cytoplasmic Z-RNA

    International Nuclear Information System (INIS)

    Zarling, D.A.; Calhoun, C.J.; Hardin, C.C.; Zarling, A.H.

    1987-01-01

    Specific immunochemical probes for Z-RNA were generated and characterized to search for possible Z-RNA-like double helices in cells. Z-RNA was detected in the cytoplasm of fixed protozoan cells by immunofluorescence microscopy using these anti-Z-RNA IgCs. In contrast, autoimmune or experimentally elicited anti-DNA antibodies, specifically reactive with B-DNA or Z-DNA, stained the nuclei. Pre-or nonimmune IgGs did not bind to the cells. RNase A or T1 digestion eliminated anti-Z-RNA IgG binding to cytoplasmic determinants; however, DNase I or mung bean nuclease had no effect. Doxorubicin and ethidium bromide prevented anti-Z-RNA antibody binding; however, actinomycin D, which does not bind double-stranded RNA, did not. Anti-Z-RNA immunofluorescence was specifically blocked in competition assays by synthetic Z-RNA but not Z-DNA, A-RNA, or single-stranded RNAs. Thus, some cytoplasmic sequences in fixed cells exist in the left-handed Z-RNA conformation

  15. Traffic and Granular Flow ’03

    CERN Document Server

    Luding, Stefan; Bovy, Piet; Schreckenberg, Michael; Wolf, Dietrich

    2005-01-01

    These proceedings are the fifth in the series Traffic and Granular Flow, and we hope they will be as useful a reference as their predecessors. Both the realistic modelling of granular media and traffic flow present important challenges at the borderline between physics and engineering, and enormous progress has been made since 1995, when this series started. Still the research on these topics is thriving, so that this book again contains many new results. Some highlights addressed at this conference were the influence of long range electric and magnetic forces and ambient fluids on granular media, new precise traffic measurements, and experiments on the complex decision making of drivers. No doubt the “hot topics” addressed in granular matter research have diverged from those in traffic since the days when the obvious analogies between traffic jams on highways and dissipative clustering in granular flow intrigued both c- munities alike. However, now just this diversity became a stimulating feature of the ...

  16. Bedrock erosion by sliding wear in channelized granular flow

    Science.gov (United States)

    Hung, C. Y.; Stark, C. P.; Capart, H.; Smith, B.; Maia, H. T.; Li, L.; Reitz, M. D.

    2014-12-01

    Boundary forces generated by debris flows can be powerful enough to erode bedrock and cause considerable damage to infrastructure during runout. Bedrock wear can be separated into impact and sliding wear processes. Here we focus on sliding wear. We have conducted experiments with a 40-cm-diameter grainflow-generating rotating drum designed to simulate dry channelized debris flows. To generate sliding erosion, we placed a 20-cm-diameter bedrock plate axially on the back wall of the drum. The rotating drum was half filled with 2.3-mm-diameter grains, which formed a thin grain-avalanching layer with peak flow speed and depth close to the drum axis. The whole experimental apparatus was placed on a 100g-ton geotechnical centrifuge and, in order to scale up the stress level, spun to a range of effective gravity levels. Rates and patterns of erosion of the bedrock plate were mapped after each experiment using 3d micro-photogrammetry. High-speed video and particle tracking were employed to measure granular flow dynamics. The resulting data for granular velocities and flow geometry were used to estimate impulse exchanges and forces on the bedrock plate. To address some of the complexities of granular flow under variable gravity levels, we developed a continuum model framed around a GDR MiDi rheology. This model allowed us to scale up boundary forcing while maintaining the same granular flow regime, and helped us to understand important aspects of the flow dynamics including e.g. fluxes of momentum and kinetic energy. In order to understand the detailed processes of boundary forcing, we performed numerical simulations with a new contact dynamics model. This model confirmed key aspects of our continuum model and provided information on second-order behavior such as fluctuations in the forces acting on the wall. By combining these measurements and theoretical analyses, we have developed and calibrated a constitutive model for sliding wear that is a threshold function of

  17. Clustering impact regime with shocks in freely evolving granular gas

    Science.gov (United States)

    Isobe, Masaharu

    2017-06-01

    A freely cooling granular gas without any external force evolves from the initial homogeneous state to the inhomogeneous clustering state, at which the energy decay deviates from the Haff's law. The asymptotic behavior of energy in the inelastic hard sphere model have been predicted by several theories, which are based on the mode coupling theory or extension of inelastic hard rods gas. In this study, we revisited the clustering regime of freely evolving granular gas via large-scale molecular dynamics simulation with up to 16.7 million inelastic hard disks. We found novel regime regarding on collisions between "clusters" spontaneously appearing after clustering regime, which can only be identified more than a few million particles system. The volumetric dilatation pattern of semicircular shape originated from density shock propagation are well characterized on the appearing of "cluster impact" during the aggregation process of clusters.

  18. Dynamic Deformation and Collapse of Granular Columns

    Science.gov (United States)

    Uenishi, K.; Tsuji, K.; Doi, S.

    2009-12-01

    Large dynamic deformation of granular materials may be found in nature not only in the failure of slopes and cliffs — due to earthquakes, rock avalanches, debris flows and landslides — but also in earthquake faulting itself. Granular surface flows often consist of solid grains and intergranular fluid, but the effect of the fluid may be usually negligible because the volumetric concentration of grains is in many cases high enough for interparticle forces to dominate momentum transport. Therefore, the investigation of dry granular flow of a mass might assist in further understanding of the above mentioned geophysical events. Here, utilizing a high-speed digital video camera system, we perform a simple yet fully-controlled series of laboratory experiments related to the collapse of granular columns. We record, at an interval of some microseconds, the dynamic transient granular mass flow initiated by abrupt release of a tube that contains dry granular materials. The acrylic tube is partially filled with glass beads and has a cross-section of either a fully- or semi-cylindrical shape. Upon sudden removal of the tube, the granular solid may fragment under the action of its own weight and the particles spread on a rigid horizontal plane. This study is essentially the extension of the previous ones by Lajeunesse et al. (Phys. Fluids 2004) and Uenishi and Tsuji (JPGU 2008), but the striped layers of particles in a semi-cylindrical tube, newly introduced in this contribution, allow us to observe the precise particle movement inside the granular column: The development of slip lines inside the column and the movement of particles against each other can be clearly identified. The major controlling parameters of the spreading dynamics are the initial aspect ratio of the granular (semi-)cylindrical column, the frictional properties of the horizontal plane (substrate) and the size of beads. We show the influence of each parameter on the average flow velocity and final radius

  19. Controlling wave propagation through nonlinear engineered granular systems

    Science.gov (United States)

    Leonard, Andrea

    We study the fundamental dynamic behavior of a special class of ordered granular systems in order to design new, structured materials with unique physical properties. The dynamic properties of granular systems are dictated by the nonlinear, Hertzian, potential in compression and zero tensile strength resulting from the discrete material structure. Engineering the underlying particle arrangement of granular systems allows for unique dynamic properties, not observed in natural, disordered granular media. While extensive studies on 1D granular crystals have suggested their usefulness for a variety of engineering applications, considerably less attention has been given to higher-dimensional systems. The extension of these studies in higher dimensions could enable the discovery of richer physical phenomena not possible in 1D, such as spatial redirection and anisotropic energy trapping. We present experiments, numerical simulation (based on a discrete particle model), and in some cases theoretical predictions for several engineered granular systems, studying the effects of particle arrangement on the highly nonlinear transient wave propagation to develop means for controlling the wave propagation pathways. The first component of this thesis studies the stress wave propagation resulting from a localized impulsive loading for three different 2D particle lattice structures: square, centered square, and hexagonal granular crystals. By varying the lattice structure, we observe a wide range of properties for the propagating stress waves: quasi-1D solitary wave propagation, fully 2D wave propagation with tunable wave front shapes, and 2D pulsed wave propagation. Additionally the effects of weak disorder, inevitably present in real granular systems, are investigated. The second half of this thesis studies the solitary wave propagation through 2D and 3D ordered networks of granular chains, reducing the effective density compared to granular crystals by selectively placing wave

  20. Aerofractures in Confined Granular Media

    Science.gov (United States)

    Eriksen, Fredrik K.; Turkaya, Semih; Toussaint, Renaud; Måløy, Knut J.; Flekkøy, Eirik G.

    2015-04-01

    We will present the optical analysis of experimental aerofractures in confined granular media. The study of this generic process may have applications in industries involving hydraulic fracturing of tight rocks, safe construction of dams, tunnels and mines, and in earth science where phenomena such as mud volcanoes and sand injectites are results of subsurface sediment displacements driven by fluid overpressure. It is also interesting to increase the understanding the flow instability itself, and how the fluid flow impacts the solid surrounding fractures and in the rest of the sample. Such processes where previously studied numerically [Niebling 2012a, Niebling 2012b] or in circular geometries. We will here explore experimentally linear geometries. We study the fracturing patterns that form when air flows into a dense, non-cohesive porous medium confined in a Hele-Shaw cell - i.e. into a packing of dry 80 micron beads placed between two glass plates separated by ~1mm. The cell is rectangular and fitted with a semi-permeable boundary to the atmosphere - blocking beads but not air - on one short edge, while the other three edges are impermeable. The porous medium is packed inside the cell between the semi-permeable boundary and an empty volume at the sealed side where the air pressure can be set and kept at a constant overpressure (1-2bar). Thus, for the air trapped inside the cell to release the overpressure it has to move through the solid. At high enough overpressures the air flow deforms the solid and increase permeability in some regions along the air-solid interface, which results in unstable flow and aerofracturing. Aerofractures are thought to be an analogue to hydrofractures, and an advantage of performing aerofracturing experiments in a Hele-Shaw cell is that the fracturing process can easily be observed in the lab. Our experiments are recorded with a high speed camera with a framerate of 1000 frames per second. In the analysis, by using various image

  1. Thermal conductivity of granular materials

    Energy Technology Data Exchange (ETDEWEB)

    Buyevich, Yu A

    1974-01-01

    Stationary heat transfer in a granular material consisting of a continuous medium containing spherical granules of other substances is considered under the assumption that the spatial distribution of granules is random. The effective thermal conductivity characterizing macroscopic heat transfer in such a material is expressed as a certain function of the conductivities and volume fractions of the medium and dispersed substances. For reasons of mathematical analogy, all the results obtained for the thermal conductivity are valid while computing the effective diffusivity of some admixture in granular materials as well as for evaluation of the effective electric conductivity or the mean dielectric and magnetic permeabilities of granular conductors and dielectrics. (23 refs.)

  2. Granular materials flow like complex fluids

    Science.gov (United States)

    Kou, Binquan; Cao, Yixin; Li, Jindong; Xia, Chengjie; Li, Zhifeng; Dong, Haipeng; Zhang, Ang; Zhang, Jie; Kob, Walter; Wang, Yujie

    2017-11-01

    Granular materials such as sand, powders and foams are ubiquitous in daily life and in industrial and geotechnical applications. These disordered systems form stable structures when unperturbed, but in the presence of external influences such as tapping or shear they `relax', becoming fluid in nature. It is often assumed that the relaxation dynamics of granular systems is similar to that of thermal glass-forming systems. However, so far it has not been possible to determine experimentally the dynamic properties of three-dimensional granular systems at the particle level. This lack of experimental data, combined with the fact that the motion of granular particles involves friction (whereas the motion of particles in thermal glass-forming systems does not), means that an accurate description of the relaxation dynamics of granular materials is lacking. Here we use X-ray tomography to determine the microscale relaxation dynamics of hard granular ellipsoids subject to an oscillatory shear. We find that the distribution of the displacements of the ellipsoids is well described by a Gumbel law (which is similar to a Gaussian distribution for small displacements but has a heavier tail for larger displacements), with a shape parameter that is independent of the amplitude of the shear strain and of the time. Despite this universality, the mean squared displacement of an individual ellipsoid follows a power law as a function of time, with an exponent that does depend on the strain amplitude and time. We argue that these results are related to microscale relaxation mechanisms that involve friction and memory effects (whereby the motion of an ellipsoid at a given point in time depends on its previous motion). Our observations demonstrate that, at the particle level, the dynamic behaviour of granular systems is qualitatively different from that of thermal glass-forming systems, and is instead more similar to that of complex fluids. We conclude that granular materials can relax

  3. Ten cases of severe oral lichen planus showing granular C3 deposition in oral mucosal basement membrane zone.

    Science.gov (United States)

    Hashimoto, Takashi; Fukuda, Aoi; Himejima, Akio; Morita, Shosuke; Tsuruta, Daisuke; Koga, Hiroshi; Krol, Rafal P; Ishii, Norito

    2015-01-01

    Oral lichen planus (OLP) may show depositions of immunoglobulins and complement components in oral mucosal basement membrane zone (BMZ) in direct immunofluorescence, although these finding are not frequently seen. We collected and examined ten cases of severe OLP showing granular C3 deposition in BMZ. In addition to clinical, histopathological and direct immunofluorescence assessments, we performed various immune-serological tests, including indirect immunofluorescence of normal human skin and 1M NaCl-split skin, immunoblotting of normal human epidermal and dermal extracts, recombinant proteins of BP180 NC16a and C-terminal domains, concentrated culture supernatant of HaCaT cells and purified human laminin-332, and enzyme-linked immunosorbent assays for BP230 and BP180. Direct immunofluorescence showed C3 deposition in BMZ exclusively of granular pattern in 7 cases and of both granular and linear patterns in 3 cases. The 10 cases showed no positive reactivity for either IgG or IgA antibodies in any immuno-serological tests. Detailed analyses of clinical, histopathological and immunological findings revealed striking female prevalence, although other parameters were in general characteristic of OLP. Granular C3 deposition in oral BMZ may be one of the characteristic features of severe OLP, although mechanisms for C3 deposition and its pathogenic role in OLP are currently unknown.

  4. Cytoplasmic influence of nucleolar development

    International Nuclear Information System (INIS)

    Ghosh, Sibdas

    1974-01-01

    The role of cytoplasmic factors on the development of nucleolus in nucleus has been investigated in Ehrlich mouse ascites tumour cells using tritiated thymidine/uridine for autoradiography. It is inferred from the observations that the cytoplasmic factors has some but not absolute control over the development of nucleolus. (M.G.B.)

  5. Deformation of a 3D granular media caused by fluid invasion

    Science.gov (United States)

    Dalbe, M. J.; Juanes, R.

    2016-12-01

    Multiphase flow in porous media plays a fundamental role in many natural and engineered subsurface processes. The interplay between fluid flow, medium deformation and fracture is essential in geoscience problems as disparate as fracking for unconventional hydrocarbon production, conduit formation and methane venting from lake and ocean sediments, and desiccation cracks in soil. Several experimental and computational studies have shown that the competition between capillary and friction forces can lead to different regimes of deformation, from frictional fingering to hydro-capillary fracturing (Sandnes et al., Nat. Comm. 2011, Holtzman et al., PRL 2012). Most of these investigations have focused, however, on 2D or quasi-2D systems. Here, we develop an experimental set-up that allows us to observe two-phase flow in a fully 3D granular bed and measure the fluid pressure while controlling the level of confining stress. We use an index matching technique to directly visualize the injection of a liquid in a granular media saturated with another, immiscible liquid. We extract the deformation the whole granular bulk as well as at the particle level. Our results show the existence of different regimes of invasion patterns depending on key dimensionless groups that control the system.

  6. HYPERELASTIC MODELS FOR GRANULAR MATERIALS

    Energy Technology Data Exchange (ETDEWEB)

    Humrickhouse, Paul W; Corradini, Michael L

    2009-01-29

    A continuum framework for modeling of dust mobilization and transport, and the behavior of granular systems in general, has been reviewed, developed and evaluated for reactor design applications. The large quantities of micron-sized particles expected in the international fusion reactor design, ITER, will accumulate into piles and layers on surfaces, which are large relative to the individual particle size; thus, particle-particle, rather than particle-surface, interactions will determine the behavior of the material in bulk, and a continuum approach is necessary and justified in treating the phenomena of interest; e.g., particle resuspension and transport. The various constitutive relations that characterize these solid particle interactions in dense granular flows have been discussed previously, but prior to mobilization their behavior is not even fluid. Even in the absence of adhesive forces between particles, dust or sand piles can exist in static equilibrium under gravity and other forces, e.g., fluid shear. Their behavior is understood to be elastic, though not linear. The recent “granular elasticity” theory proposes a non-linear elastic model based on “Hertz contacts” between particles; the theory identifies the Coulomb yield condition as a requirement for thermodynamic stability, and has successfully reproduced experimental results for stress distributions in sand piles. The granular elasticity theory is developed and implemented in a stand- alone model and then implemented as part of a finite element model, ABAQUS, to determine the stress distributions in dust piles subjected to shear by a fluid flow. We identify yield with the onset of mobilization, and establish, for a given dust pile and flow geometry, the threshold pressure (force) conditions on the surface due to flow required to initiate it. While the granular elasticity theory applies strictly to cohesionless granular materials, attractive forces are clearly important in the interaction of

  7. Performance Evaluation of Components Using a Granularity-based Interface Between Real-Time Calculus and Timed Automata

    Directory of Open Access Journals (Sweden)

    Karine Altisen

    2010-06-01

    Full Text Available To analyze complex and heterogeneous real-time embedded systems, recent works have proposed interface techniques between real-time calculus (RTC and timed automata (TA, in order to take advantage of the strengths of each technique for analyzing various components. But the time to analyze a state-based component modeled by TA may be prohibitively high, due to the state space explosion problem. In this paper, we propose a framework of granularity-based interfacing to speed up the analysis of a TA modeled component. First, we abstract fine models to work with event streams at coarse granularity. We perform analysis of the component at multiple coarse granularities and then based on RTC theory, we derive lower and upper bounds on arrival patterns of the fine output streams using the causality closure algorithm. Our framework can help to achieve tradeoffs between precision and analysis time.

  8. Cell-Targeted Optogenetics and Electrical Microstimulation Reveal the Primate Koniocellular Projection to Supra-granular Visual Cortex.

    Science.gov (United States)

    Klein, Carsten; Evrard, Henry C; Shapcott, Katharine A; Haverkamp, Silke; Logothetis, Nikos K; Schmid, Michael C

    2016-04-06

    Electrical microstimulation and more recently optogenetics are widely used to map large-scale brain circuits. However, the neuronal specificity achieved with both methods is not well understood. Here we compare cell-targeted optogenetics and electrical microstimulation in the macaque monkey brain to functionally map the koniocellular lateral geniculate nucleus (LGN) projection to primary visual cortex (V1). Selective activation of the LGN konio neurons with CamK-specific optogenetics caused selective electrical current inflow in the supra-granular layers of V1. Electrical microstimulation targeted at LGN konio layers revealed the same supra-granular V1 activation pattern as the one elicited by optogenetics. Taken together, these findings establish a selective koniocellular LGN influence on V1 supra-granular layers, and they indicate comparable capacities of both stimulation methods to isolate thalamo-cortical circuits in the primate brain. Copyright © 2016 Elsevier Inc. All rights reserved.

  9. NMR Measurements of Granular Flow and Compaction

    Science.gov (United States)

    Fukushima, Eiichi

    1998-03-01

    Nuclear magnetic resonance (NMR) can be used to measure statistical distributions of granular flow velocity and fluctuations of velocity, as well as spatial distributions of particulate concentration, flow velocity, its fluctuations, and other parameters that may be derived from these. All measurements have been of protons in liquid-containing particles such as mustard seeds or pharmaceutical pills. Our favorite geometry has been the slowly rotating partially filled rotating drum with granular flow taking place along the free surface of the particles. All the above-mentioned parameters have been studied as well as a spatial distribution of particulate diffusion coefficients, energy dissipation due to collisions, as well as segregation of non-uniform mixtures of granular material. Finally, we describe some motions of granular material under periodic vibrations.

  10. Frustration and disorder in granular media and tectonic blocks: implications for earthquake complexity

    Directory of Open Access Journals (Sweden)

    A. Sornette

    1994-01-01

    Full Text Available We present exploratory analogies and speculations on the mechanisms underlying the organization of faulting and earthquake in the earth crust. The mechanical properties of the brittle lithosphere at scales of the order or larger than a few kilometers are proposed to be analogous to those of non-cohesive granular media, since both systems present stress amplitudes controlled by gravity, and shear band (faulting localization is determined by a type of friction Mohr-Coulomb rupture criterion. here, we explore the implications of this correspondence with respect to the origin of tectonic and earthquake complexity, on the basis of the existing experimental data on granular media available in the mechanical literature. An important observation is that motions and deformations of non-cohesive granular media are characterized by important fluctuations both in time (sudden breaks, avalanches, which are analogous to earthquakes and space (strain localizations, yield surfaces forming sometimes complex patterns. This is in apparent contradiction with the conventional wisdom in mechanics, based on the standard tendency to homogenize, which has led to dismiss fluctuations as experimental noise. On the basis of a second analogy with spinglasses and neural networks, based on the existence of block and grain packing disorder and block rotation "frustration", we suggest that these fluctuations observed both at large scales and at the block scale constitute an intrinsic signature of the mechanics of granular media. The space-time complexity observed in faulting and earthquake phenomenology is thus proposed to result form the special properties of the mechanics of granular media, dominated by the "frustration" of the kinematic deformations of its constitutive blocks.

  11. PFEM-based modeling of industrial granular flows

    Science.gov (United States)

    Cante, J.; Dávalos, C.; Hernández, J. A.; Oliver, J.; Jonsén, P.; Gustafsson, G.; Häggblad, H.-Å.

    2014-05-01

    The potential of numerical methods for the solution and optimization of industrial granular flows problems is widely accepted by the industries of this field, the challenge being to promote effectively their industrial practice. In this paper, we attempt to make an exploratory step in this regard by using a numerical model based on continuous mechanics and on the so-called Particle Finite Element Method (PFEM). This goal is achieved by focusing two specific industrial applications in mining industry and pellet manufacturing: silo discharge and calculation of power draw in tumbling mills. Both examples are representative of variations on the granular material mechanical response—varying from a stagnant configuration to a flow condition. The silo discharge is validated using the experimental data, collected on a full-scale flat bottomed cylindrical silo. The simulation is conducted with the aim of characterizing and understanding the correlation between flow patterns and pressures for concentric discharges. In the second example, the potential of PFEM as a numerical tool to track the positions of the particles inside the drum is analyzed. Pressures and wall pressures distribution are also studied. The power draw is also computed and validated against experiments in which the power is plotted in terms of the rotational speed of the drum.

  12. Transport properties of ultra-thin granular YBa2Cu3O7−δ nanobridges

    International Nuclear Information System (INIS)

    Bar, E.; Levi, D.; Koren, G.; Shaulov, A.; Yeshurun, Y.

    2014-01-01

    Highlights: • Nano bridges were patterned on laser ablated ultra-thin YBa 2 Cu 3 O 7 films. • Magneto-transport measurements reveal phenomena that are usually absent in the bulk. • Magnetoresistance (MR) oscillation point to effect of granularity. • Negative MR at low fields and negative MR slope at high fields were observed. • V-I curves exhibit voltage jumps at temperatures well below T c . - Abstract: Magneto-transport measurements in YBa 2 Cu 3 O 7 nanobridges, patterned on laser ablated ultra-thin films, reveal phenomena that are usually absent in the bulk of the material. These include broadening of the resistive transition, magnetoresistance oscillation, negative magnetoresistance at low fields, negative magnetoresistance slope at high fields, and V–I curves that exhibit voltage jumps at temperatures well below T c . These phenomena, attributed to the granular nature of the bridges, should be taken into account in any future attempts to utilize such bridges in technological applications

  13. Impact of granular drops

    KAUST Repository

    Marston, J. O.

    2013-07-15

    We investigate the spreading and splashing of granular drops during impact with a solid target. The granular drops are formed from roughly spherical balls of sand mixed with water, which is used as a binder to hold the ball together during free-fall. We measure the instantaneous spread diameter for different impact speeds and find that the normalized spread diameter d/D grows as (tV/D)1/2. The speeds of the grains ejected during the “splash” are measured and they rarely exceed twice that of the impact speed.

  14. Impact of granular drops

    KAUST Repository

    Marston, J. O.; Mansoor, Mohammad M.; Thoroddsen, Sigurdur T

    2013-01-01

    We investigate the spreading and splashing of granular drops during impact with a solid target. The granular drops are formed from roughly spherical balls of sand mixed with water, which is used as a binder to hold the ball together during free-fall. We measure the instantaneous spread diameter for different impact speeds and find that the normalized spread diameter d/D grows as (tV/D)1/2. The speeds of the grains ejected during the “splash” are measured and they rarely exceed twice that of the impact speed.

  15. Viscosity evolution of anaerobic granular sludge

    NARCIS (Netherlands)

    Pevere, A.; Guibaud, G.; Hullebusch, van E.D.; Lens, P.N.L.; Baudu, M.

    2006-01-01

    The evolution of the apparent viscosity at steady shear rate of sieved anaerobic granular sludge (20¿315 ¿m diameter) sampled from different full-scale anaerobic reactors was recorded using rotation tests. The ¿limit viscosity¿ of sieved anaerobic granular sludge was determined from the apparent

  16. Cytoplasmic Streaming - Skylab Student Experiment ED-63

    Science.gov (United States)

    1973-01-01

    This chart describes the Skylab student experiment (ED-63), Cytoplasmic Streaming, proposed by Cheryl A. Peitz of Arapahoe High School, Littleton, Colorado. Experiment ED-63 was to observe the effect of zero-gravity on cytoplasmic streaming in the aquatic plant named Elodea, commonly called water weed or water thyme. The phenomenon of cytoplasmic streaming is not well understood, but it is recognized as the circulation mechanism of the internal materials or cytoplasm of a cell. Cytoplasm is a gelatinous substance that has the ability to change its viscosity and flow, carrying various cell materials with it. The activity can be stimulated by sunlight or heat. In March 1972, NASA and the National Science Teachers Association selected 25 experiment proposals for flight on Skylab. Science advisors from the Marshall Space Flight Center aided and assisted the students in developing the proposals for flight on Skylab.

  17. Critical phenomenon of granular flow on a conveyor belt.

    Science.gov (United States)

    De-Song, Bao; Xun-Sheng, Zhang; Guang-Lei, Xu; Zheng-Quan, Pan; Xiao-Wei, Tang; Kun-Quan, Lu

    2003-06-01

    The relationship between the granular wafer movement on a two-dimensional conveyor belt and the size of the exit together with the velocity of the conveyor belt has been studied in the experiment. The result shows that there is a critical speed v(c) for the granular flow when the exit width d is fixed (where d=R/D, D being the diameter of a granular wafers). When vv(c), the flow rate Q is described as Q=Crho(v)(beta)(d-k)(3/2). These are the effects of the interaction among the granular wafers and the change of the states of the granular flow due to the changing of the speed or the exit width d.

  18. Survivable integrated grooming in multi-granularity optical networks

    Science.gov (United States)

    Wu, Jingjing; Guo, Lei; Wei, Xuetao; Liu, Yejun

    2012-05-01

    Survivability is an important issue to ensure the service continuity in optical network. At the same time, with the granularity of traffic demands ranging from sub-wavelength-level to wavelength-level, traffic demands need to be aggregated and carried over the network in order to utilize resources effectively. Therefore, multi-granularity grooming is proposed to save the cost and reduce the number of switching ports in Optical-Cross Connects (OXCs). However, current works mostly addressed the survivable wavelength or waveband grooming. Therefore, in this paper, we propose three heuristic algorithms called Multi-granularity Dedicated Protection Grooming (MDPG), Multi-granularity Shared Protection Grooming (MSPG) and Multi-granularity Mixed Protection Grooming (MMPG), respectively. All of them are performed based on the Survivable Multi-granularity Integrated Auxiliary Graph (SMIAG) that includes one Wavelength Integrated Auxiliary Graph (WIAG) for wavelength protection and one waveBand Integrated Auxiliary Graph (BIAG) for waveband protection. Numerical results show that MMPG has the lowest average port-cost, the best resource utilization ratio and the lowest blocking probability among these three algorithms. Compared with MDPG, MSPG has lower average port-cost, better resource utilization ratio and lower blocking probability.

  19. Superconductivity in inhomogeneous granular metals

    International Nuclear Information System (INIS)

    McLean, W.L.

    1980-01-01

    A model of elongated metal ellipsoids imbedded in a granular metal is treated by an effective medium approach to explain the observed temperature dependence of the normal-state conductivity of superconducting granular aluminum. Josephson tunneling is thus still required to account for the superconductivity. The model predicts the same kind of contrasting behavior on opposite sides of the metal-insulator transition as is found in the recent scaling treatment of Anderson localization

  20. The application of protein markers in conversion of maize inbred lines to the cytoplasmic male sterility basis

    Directory of Open Access Journals (Sweden)

    Stevanovic Milan

    2016-01-01

    Full Text Available A total of seven maize inbred lines of different origin and maturity group were used in the trial set up according to the split-plot randomized complete block design in five environments. Each inbred was observed in five variants: original inbred (N; cytoplasmic male sterile C-type (CMS-C; restorer for CMS-C (RfC; cytoplasmic male sterile S-type (CMS-S and restorer for CMS-S (RfS. The objective was to compare grain yield of original inbreds and their CMS and Rf variants and to apply Isoelectric focusing (IEF to determine whether the conversion of original inbreds to their CMS and Rf counterparts have been done completely. Protein markers have shown that conversion of almost all inbreds was done good and completely. Only original inbreds ZPL2 and ZPL5 did not concur on banding patterns with their RfC variants. The type of cytoplasm had a very significant impact on grain yield. Namely, CMS-C counterparts significantly out yielded their CMS-S versions, while the inbreds with C and S cytoplasm over yielded inbreds with N cytoplasm, as well as their RfC and RfS versions.

  1. On inconsistency in frictional granular systems

    Science.gov (United States)

    Alart, Pierre; Renouf, Mathieu

    2018-04-01

    Numerical simulation of granular systems is often based on a discrete element method. The nonsmooth contact dynamics approach can be used to solve a broad range of granular problems, especially involving rigid bodies. However, difficulties could be encountered and hamper successful completion of some simulations. The slow convergence of the nonsmooth solver may sometimes be attributed to an ill-conditioned system, but the convergence may also fail. The prime aim of the present study was to identify situations that hamper the consistency of the mathematical problem to solve. Some simple granular systems were investigated in detail while reviewing and applying the related theoretical results. A practical alternative is briefly analyzed and tested.

  2. Statistical mechanics of dense granular media

    International Nuclear Information System (INIS)

    Coniglio, A; Fierro, A; Nicodemi, M; Ciamarra, M Pica; Tarzia, M

    2005-01-01

    We discuss some recent results on the statistical mechanics approach to dense granular media. In particular, by analytical mean field investigation we derive the phase diagram of monodisperse and bidisperse granular assemblies. We show that 'jamming' corresponds to a phase transition from a 'fluid' to a 'glassy' phase, observed when crystallization is avoided. The nature of such a 'glassy' phase turns out to be the same as found in mean field models for glass formers. This gives quantitative evidence for the idea of a unified description of the 'jamming' transition in granular media and thermal systems, such as glasses. We also discuss mixing/segregation transitions in binary mixtures and their connections to phase separation and 'geometric' effects

  3. Uniparental Inheritance Promotes Adaptive Evolution in Cytoplasmic Genomes

    Science.gov (United States)

    Christie, Joshua R.; Beekman, Madeleine

    2017-01-01

    Eukaryotes carry numerous asexual cytoplasmic genomes (mitochondria and plastids). Lacking recombination, asexual genomes should theoretically suffer from impaired adaptive evolution. Yet, empirical evidence indicates that cytoplasmic genomes experience higher levels of adaptive evolution than predicted by theory. In this study, we use a computational model to show that the unique biology of cytoplasmic genomes—specifically their organization into host cells and their uniparental (maternal) inheritance—enable them to undergo effective adaptive evolution. Uniparental inheritance of cytoplasmic genomes decreases competition between different beneficial substitutions (clonal interference), promoting the accumulation of beneficial substitutions. Uniparental inheritance also facilitates selection against deleterious cytoplasmic substitutions, slowing Muller’s ratchet. In addition, uniparental inheritance generally reduces genetic hitchhiking of deleterious substitutions during selective sweeps. Overall, uniparental inheritance promotes adaptive evolution by increasing the level of beneficial substitutions relative to deleterious substitutions. When we assume that cytoplasmic genome inheritance is biparental, decreasing the number of genomes transmitted during gametogenesis (bottleneck) aids adaptive evolution. Nevertheless, adaptive evolution is always more efficient when inheritance is uniparental. Our findings explain empirical observations that cytoplasmic genomes—despite their asexual mode of reproduction—can readily undergo adaptive evolution. PMID:28025277

  4. Storage and discharge of a granular fluid.

    Science.gov (United States)

    Pacheco-Martinez, Hector; van Gerner, Henk Jan; Ruiz-Suárez, J C

    2008-02-01

    Experiments and computational simulations are carried out to study the behavior of a granular column in a silo whose walls are able to vibrate horizontally. The column is brought to a steady fluidized state and it behaves similar to a hydrostatic system. We study the dynamics of the granular discharge through openings at the bottom of the silo in order to search for a Torricelli-like behavior. We show that the flow rate scales with the wall induced shear rate, and at high rates, the granular bed indeed discharges similar to a viscous fluid.

  5. Patients want granular privacy control over health information in electronic medical records.

    Science.gov (United States)

    Caine, Kelly; Hanania, Rima

    2013-01-01

    To assess patients' desire for granular level privacy control over which personal health information should be shared, with whom, and for what purpose; and whether these preferences vary based on sensitivity of health information. A card task for matching health information with providers, questionnaire, and interview with 30 patients whose health information is stored in an electronic medical record system. Most patients' records contained sensitive health information. No patients reported that they would prefer to share all information stored in an electronic medical record (EMR) with all potential recipients. Sharing preferences varied by type of information (EMR data element) and recipient (eg, primary care provider), and overall sharing preferences varied by participant. Patients with and without sensitive records preferred less sharing of sensitive versus less-sensitive information. Patients expressed sharing preferences consistent with a desire for granular privacy control over which health information should be shared with whom and expressed differences in sharing preferences for sensitive versus less-sensitive EMR data. The pattern of results may be used by designers to generate privacy-preserving EMR systems including interfaces for patients to express privacy and sharing preferences. To maintain the level of privacy afforded by medical records and to achieve alignment with patients' preferences, patients should have granular privacy control over information contained in their EMR.

  6. Characterization of Unbound Granular Materials for Pavements

    NARCIS (Netherlands)

    Araya, A.A.

    2011-01-01

    This research is focused on the characterization of the mechanical behavior of unbound granular road base materials (UGMs). An extensive laboratory investigation is described, in which various methods for determination of the mechanical properties of granular materials are examined for their

  7. A numerical study of granular dam-break flow

    Science.gov (United States)

    Pophet, N.; Rébillout, L.; Ozeren, Y.; Altinakar, M.

    2017-12-01

    Accurate prediction of granular flow behavior is essential to optimize mitigation measures for hazardous natural granular flows such as landslides, debris flows and tailings-dam break flows. So far, most successful models for these types of flows focus on either pure granular flows or flows of saturated grain-fluid mixtures by employing a constant friction model or more complex rheological models. These saturated models often produce non-physical result when they are applied to simulate flows of partially saturated mixtures. Therefore, more advanced models are needed. A numerical model was developed for granular flow employing a constant friction and μ(I) rheology (Jop et al., J. Fluid Mech. 2005) coupled with a groundwater flow model for seepage flow. The granular flow is simulated by solving a mixture model using Finite Volume Method (FVM). The Volume-of-Fluid (VOF) technique is used to capture the free surface motion. The constant friction and μ(I) rheological models are incorporated in the mixture model. The seepage flow is modeled by solving Richards equation. A framework is developed to couple these two solvers in OpenFOAM. The model was validated and tested by reproducing laboratory experiments of partially and fully channelized dam-break flows of dry and initially saturated granular material. To obtain appropriate parameters for rheological models, a series of simulations with different sets of rheological parameters is performed. The simulation results obtained from constant friction and μ(I) rheological models are compared with laboratory experiments for granular free surface interface, front position and velocity field during the flows. The numerical predictions indicate that the proposed model is promising in predicting dynamics of the flow and deposition process. The proposed model may provide more reliable insight than the previous assumed saturated mixture model, when saturated and partially saturated portions of granular mixture co-exist.

  8. Similitude study of a moving bed granular filter

    Energy Technology Data Exchange (ETDEWEB)

    Robert C. Brown; Huawei Shi; Gerald Colver; Saw-Choon Soo [Iowa State University, IA (United States)

    2003-12-10

    The goal of this study was to evaluate the performance of a moving bed granular filter designed for hot gas clean up. This study used similitude theory to devise experiments that were conducted at near-ambient conditions while simulating the performance of filters operated at elevated temperatures and pressures (850{sup o}C and 1000 kPa). These experiments revealed that the proposed moving bed granular filter can operate at high collection efficiencies, typically exceeding 99%, and low pressure drops without the need for periodic regeneration through the use of a continuous flow of fresh granular filter media in the filter. In addition, important design constraints were discovered for the successful operation of the proposed moving bed granular filter.

  9. Cytoplasmic Estrogen Receptor in breast cancer

    Science.gov (United States)

    Welsh, Allison W.; Lannin, Donald R.; Young, Gregory S.; Sherman, Mark E.; Figueroa, Jonine D.; Henry, N. Lynn; Ryden, Lisa; Kim, Chungyeul; Love, Richard R.; Schiff, Rachel; Rimm, David L.

    2011-01-01

    Purpose In addition to genomic signaling, it is accepted that ERα has non-nuclear signaling functions, which correlate with tamoxifen resistance in preclinical models. However, evidence for cytoplasmic ER localization in human breast tumors is less established. We sought to determine the presence and implications of non-nuclear ER in clinical specimens. Experimental Design A panel of ERα-specific antibodies (SP1, MC20, F10, 60c, 1D5) were validated by western blot and quantitative immunofluorescent (QIF) analysis of cell lines and patient controls. Then eight retrospective cohorts collected on tissue microarrays were assessed for cytoplasmic ER. Four cohorts were from Yale (YTMA 49, 107, 130, 128) and four others (NCI YTMA 99, South Swedish Breast Cancer Group SBII, NSABP B14, and a Vietnamese Cohort) from other sites around the world. Results Four of the antibodies specifically recognized ER by western and QIF, showed linear increases in amounts of ER in cell line series with progressively increasing ER, and the antibodies were reproducible on YTMA 49 with pearson’s correlations (r2 values)ranging from 0.87-0.94. One antibody with striking cytoplasmic staining (MC20) failed validation. We found evidence for specific cytoplasmic staining with the other 4 antibodies across eight cohorts. The average incidence was 1.5%, ranging from 0 to 3.2%. Conclusions Our data shows ERα present in the cytoplasm in a number of cases using multiple antibodies, while reinforcing the importance of antibody validation. In nearly 3,200 cases, cytoplasmic ER is present at very low incidence, suggesting its measurement is unlikely to be of routine clinical value. PMID:21980134

  10. Granular Gases: Probing the Boundaries of Hydrodynamics

    International Nuclear Information System (INIS)

    Goldhirsch, I.

    1999-01-01

    The dissipative nature of the particle interactions in granular systems renders granular gases mesoscopic and bearing some similarities to regular gases in the ''continuum transition regime'' where shear rates and/or thermal gradients are very large). The following properties of granular gases support the above claim: (i). Mean free times are of the same order as macroscopic time scales (inverse shear rates); (ii). Mean free paths can be macroscopic and comparable to the system's dimensions; (iii). Typical flows are supersonic; (iv). Shear rates are typically ''large''; (v). Stress fields are scale (resolution) dependent; (vi). Burnett and super-Burnett corrections to both the constitutive relations and the boundary conditions are of importance; (vii). Single particle distribution functions can be far from Gaussian. It is concluded that while hydrodynamic descriptions of granular gases are relevant, they are probing the boundaries of applicability of hydrodynamics and perhaps slightly beyond

  11. Uniform shock waves in disordered granular matter.

    Science.gov (United States)

    Gómez, Leopoldo R; Turner, Ari M; Vitelli, Vincenzo

    2012-10-01

    The confining pressure P is perhaps the most important parameter controlling the properties of granular matter. Strongly compressed granular media are, in many respects, simple solids in which elastic perturbations travel as ordinary phonons. However, the speed of sound in granular aggregates continuously decreases as the confining pressure decreases, completely vanishing at the jamming-unjamming transition. This anomalous behavior suggests that the transport of energy at low pressures should not be dominated by phonons. In this work we use simulations and theory to show how the response of granular systems becomes increasingly nonlinear as pressure decreases. In the low-pressure regime the elastic energy is found to be mainly transported through nonlinear waves and shocks. We numerically characterize the propagation speed, shape, and stability of these shocks and model the dependence of the shock speed on pressure and impact intensity by a simple analytical approach.

  12. Pattern formation of frictional fingers in a gravitational potential

    Science.gov (United States)

    Eriksen, Jon Alm; Toussaint, Renaud; Mâløy, Knut Jørgen; Flekkøy, Eirik; Galland, Olivier; Sandnes, Bjørnar

    2018-01-01

    Aligned finger structures, with a characteristic width, emerge during the slow drainage of a liquid-granular mixture in a tilted Hele-Shaw cell. A transition from vertical to horizontal alignment of the finger structures is observed as the tilting angle and the granular density are varied. An analytical model is presented, demonstrating that the alignment properties are the result of the competition between fluctuating granular stresses and the hydrostatic pressure. The dynamics is reproduced in simulations. We also show how the system explains patterns observed in nature, created during the early stages of a dike formation.

  13. Nephronectin is Correlated with Poor Prognosis in Breast Cancer and Promotes Metastasis via its Integrin-Binding Motifs

    Directory of Open Access Journals (Sweden)

    Tonje S. Steigedal

    2018-04-01

    Full Text Available Most cancer patients with solid tumors who succumb to their illness die of metastatic disease. While early detection and improved treatment have led to reduced mortality, even for those with metastatic cancer, some patients still respond poorly to treatment. Understanding the mechanisms of metastasis is important to improve prognostication, to stratify patients for treatment, and to identify new targets for therapy. We have shown previously that expression of nephronectin (NPNT is correlated with metastatic propensity in breast cancer cell lines. In the present study, we provide a comprehensive analysis of the expression pattern and distribution of NPNT in breast cancer tissue from 842 patients by immunohistochemical staining of tissue microarrays from a historic cohort. Several patterns of NPNT staining were observed. An association between granular cytoplasmic staining (in <10% of tumor cells and poor prognosis was found. We suggest that granular cytoplasmic staining may represent NPNT-positive exosomes. We found that NPNT promotes adhesion and anchorage-independent growth via its integrin-binding and enhancer motifs and that enforced expression in breast tumor cells promotes their colonization of the lungs. We propose that NPNT may be a novel prognostic marker in a subgroup of breast cancer patients.

  14. Cytoplasmic transduction peptide (CTP): New approach for the delivery of biomolecules into cytoplasm in vitro and in vivo

    International Nuclear Information System (INIS)

    Kim, Daeyou; Jeon, Choonju; Kim, Jeong-Hwan; Kim, Mi-Seon; Yoon, Cheol-Hee; Choi, In-Soo; Kim, Sung-Hoon; Bae, Yong-Soo

    2006-01-01

    The protein transduction domain (PTD) of HIV-1 TAT has been extensively documented with regard to its membrane transduction potential, as well as its efficient delivery of biomolecules in vivo. However, the majority of PTD and PTD-conjugated molecules translocate to the nucleus rather than to the cytoplasm after transduction, due to the functional nuclear localization sequence (NLS). Here, we report a cytoplasmic transduction peptide (CTP), which was deliberately designed to ensure the efficient cytoplasmic delivery of the CTP-fused biomolecules. In comparison with PTD, CTP and its fusion partners exhibited a clear preference for cytoplasmic localization, and also markedly enhanced membrane transduction potential. Unlike the mechanism underlying PTD-mediated transduction, CTP-mediated transduction occurs independently of the lipid raft-dependent macropinocytosis pathway. The CTP-conjugated Smac/DIABLO peptide (Smac-CTP) was also shown to be much more efficient than Smac-PTD in the blockage of the antiapoptotic properties of XIAP, suggesting that cytoplasmic functional molecules can be more efficiently targeted by CTP-mediated delivery. In in vivo trafficking studies, CTP-fused β-gal exhibited unique organ tropisms to the liver and lymph nodes when systemically injected into mice, whereas PTD-β-gal exhibited no such tropisms. Taken together, our findings implicate CTP as a novel delivery peptide appropriate for (i) molecular targeting to cytoplasmic compartments in vitro, (ii) the development of class I-associated CTL vaccines, and (iii) special drug delivery in vivo, without causing any untoward effects on nuclear genetic material

  15. Arrest of cytoplasmic streaming induces algal proliferation in green paramecia.

    Directory of Open Access Journals (Sweden)

    Toshiyuki Takahashi

    Full Text Available A green ciliate Paramecium bursaria, bearing several hundreds of endosymbiotic algae, demonstrates rotational microtubule-based cytoplasmic streaming, in which cytoplasmic granules and endosymbiotic algae flow in a constant direction. However, its physiological significance is still unknown. We investigated physiological roles of cytoplasmic streaming in P. bursaria through host cell cycle using video-microscopy. Here, we found that cytoplasmic streaming was arrested in dividing green paramecia and the endosymbiotic algae proliferated only during the arrest of cytoplasmic streaming. Interestingly, arrest of cytoplasmic streaming with pressure or a microtubule drug also induced proliferation of endosymbiotic algae independently of host cell cycle. Thus, cytoplasmic streaming may control the algal proliferation in P. bursaria. Furthermore, confocal microscopic observation revealed that a division septum was formed in the constricted area of a dividing paramecium, producing arrest of cytoplasmic streaming. This is a first report to suggest that cytoplasmic streaming controls proliferation of eukaryotic cells.

  16. Uniparental Inheritance Promotes Adaptive Evolution in Cytoplasmic Genomes.

    Science.gov (United States)

    Christie, Joshua R; Beekman, Madeleine

    2017-03-01

    Eukaryotes carry numerous asexual cytoplasmic genomes (mitochondria and plastids). Lacking recombination, asexual genomes should theoretically suffer from impaired adaptive evolution. Yet, empirical evidence indicates that cytoplasmic genomes experience higher levels of adaptive evolution than predicted by theory. In this study, we use a computational model to show that the unique biology of cytoplasmic genomes-specifically their organization into host cells and their uniparental (maternal) inheritance-enable them to undergo effective adaptive evolution. Uniparental inheritance of cytoplasmic genomes decreases competition between different beneficial substitutions (clonal interference), promoting the accumulation of beneficial substitutions. Uniparental inheritance also facilitates selection against deleterious cytoplasmic substitutions, slowing Muller's ratchet. In addition, uniparental inheritance generally reduces genetic hitchhiking of deleterious substitutions during selective sweeps. Overall, uniparental inheritance promotes adaptive evolution by increasing the level of beneficial substitutions relative to deleterious substitutions. When we assume that cytoplasmic genome inheritance is biparental, decreasing the number of genomes transmitted during gametogenesis (bottleneck) aids adaptive evolution. Nevertheless, adaptive evolution is always more efficient when inheritance is uniparental. Our findings explain empirical observations that cytoplasmic genomes-despite their asexual mode of reproduction-can readily undergo adaptive evolution. © The Author 2016. Published by Oxford University Press on behalf of the Society for Molecular Biology and Evolution.

  17. Shock waves in weakly compressed granular media.

    Science.gov (United States)

    van den Wildenberg, Siet; van Loo, Rogier; van Hecke, Martin

    2013-11-22

    We experimentally probe nonlinear wave propagation in weakly compressed granular media and observe a crossover from quasilinear sound waves at low impact to shock waves at high impact. We show that this crossover impact grows with the confining pressure P0, whereas the shock wave speed is independent of P0-two hallmarks of granular shocks predicted recently. The shocks exhibit surprising power law attenuation, which we model with a logarithmic law implying that shock dissipation is weak and qualitatively different from other granular dissipation mechanisms. We show that elastic and potential energy balance in the leading part of the shocks.

  18. A hydrodynamic model for granular material flows including segregation effects

    Science.gov (United States)

    Gilberg, Dominik; Klar, Axel; Steiner, Konrad

    2017-06-01

    The simulation of granular flows including segregation effects in large industrial processes using particle methods is accurate, but very time-consuming. To overcome the long computation times a macroscopic model is a natural choice. Therefore, we couple a mixture theory based segregation model to a hydrodynamic model of Navier-Stokes-type, describing the flow behavior of the granular material. The granular flow model is a hybrid model derived from kinetic theory and a soil mechanical approach to cover the regime of fast dilute flow, as well as slow dense flow, where the density of the granular material is close to the maximum packing density. Originally, the segregation model has been formulated by Thornton and Gray for idealized avalanches. It is modified and adapted to be in the preferred form for the coupling. In the final coupled model the segregation process depends on the local state of the granular system. On the other hand, the granular system changes as differently mixed regions of the granular material differ i.e. in the packing density. For the modeling process the focus lies on dry granular material flows of two particle types differing only in size but can be easily extended to arbitrary granular mixtures of different particle size and density. To solve the coupled system a finite volume approach is used. To test the model the rotational mixing of small and large particles in a tumbler is simulated.

  19. An Emotional Agent Model Based on Granular Computing

    Directory of Open Access Journals (Sweden)

    Jun Hu

    2012-01-01

    Full Text Available Affective computing has a very important significance for fulfilling intelligent information processing and harmonious communication between human being and computers. A new model for emotional agent is proposed in this paper to make agent have the ability of handling emotions, based on the granular computing theory and the traditional BDI agent model. Firstly, a new emotion knowledge base based on granular computing for emotion expression is presented in the model. Secondly, a new emotional reasoning algorithm based on granular computing is proposed. Thirdly, a new emotional agent model based on granular computing is presented. Finally, based on the model, an emotional agent for patient assistant in hospital is realized, experiment results show that it is efficient to handle simple emotions.

  20. Long-range interactions in dilute granular systems

    NARCIS (Netherlands)

    Müller, M.K

    2008-01-01

    In this thesis, on purpose, we focussed on the most challenging, longest ranging potentials. We analyzed granular media of low densities obeying 1/r long-range interaction potentials between the granules. Such systems are termed granular gases and differ in their behavior from ordinary gases by

  1. Looking into the evolution of granular asteroids in the Solar System

    Science.gov (United States)

    Sánchez, Paul; Scheeres, Daniel; Hirabayashi, Masatoshi; Tardivel, Simon

    2017-06-01

    By now it has been accepted that most of the small asteroids in the Solar System are granular aggregates kept together by gravitational and possibly, cohesive forces. These aggregates can form, deform and disrupt over millennia subjected to different internal and external factors that would ultimately determine how they evolve over time. Parameters such as porosity, cohesive and tensile strength, angles of friction, particle size distributions, stress states, heterogeneity and yield criteria among others, determine how these granular systems will react when subjected to different, changing, external factors. These external factors include solar photon momentum, gravitational tides, micro- and macro-impacts and are believed to have produced and shaped the current asteroid population. In our research we use a combination of Soil Mechanics theory, Soft-Sphere Discrete Element Method (SSDEM) Simulations and Orbital Mechanics in order to understand how simulated, homogeneous and heterogeneous, ellipsoidal and spherical gravitational aggregates, a crude but useful representation of an asteroid, evolve when rotated to the point of disruption. Then, we compare our results to the shapes of observed asteroids as well as to the disruption patterns of a few active asteroids. Our results lead us to believe that the different shapes of observed asteroids as well as their unique disruption patterns could give us clues about their internal structure, strength and geophysical properties in general.

  2. Assessing continuum postulates in simulations of granular flow

    Energy Technology Data Exchange (ETDEWEB)

    Rycroft, Chris; Kamrin, Ken; Bazant, Martin

    2008-08-26

    Continuum mechanics relies on the fundamental notion of a mesoscopic volume"element" in which properties averaged over discrete particles obey deterministic relationships. Recent work on granular materials suggests a continuum law may be inapplicable, revealing inhomogeneities at the particle level, such as force chains and slow cage breaking. Here, we analyze large-scale three-dimensional Discrete-Element Method (DEM) simulations of different granular flows and show that an approximate"granular element" defined at the scale of observed dynamical correlations (roughly three to five particle diameters) has a reasonable continuum interpretation. By viewing all the simulations as an ensemble of granular elements which deform and move with the flow, we can track material evolution at a local level. Our results confirm some of the hypotheses of classical plasticity theory while contradicting others and suggest a subtle physical picture of granular failure, combining liquid-like dependence on deformation rate and solid-like dependence on strain. Our computational methods and results can be used to guide the development of more realistic continuum models, based on observed local relationships betweenaverage variables.

  3. Granular Materials and Risks In ISRU

    Science.gov (United States)

    Behringer, Robert P.; Wilkinson, R. Allen

    2004-01-01

    Working with soil, sand, powders, ores, cement and sintered bricks, excavating, grading construction sites, driving off-road, transporting granules in chutes and pipes, sifting gravel, separating solids from gases, and using hoppers are so routine that it seems straightforward to execute these operations on the Moon and Mars as we do on Earth. We discuss how little these processes are understood and point out the nature of trial-and-error practices that are used in today's massive over-design. Nevertheless, such designs have a high failure rate. Implementation and extensive incremental scaling up of industrial processes are routine because of the inadequate predictive tools for design. We present a number of pragmatic scenarios where granular materials play a role, the risks involved, what some of the basic issues are, and what understanding is needed to greatly reduce the risks. This talk will focus on a particular class of granular flow issues, those that pertain to dense materials, their physics, and the failure problems associated with them. In particular, key issues where basic predictability is lacking include stability of soils for the support of vehicles and facilities, ability to control the flow of dense materials (jamming and flooding/unjamming at the wrong time), the ability to predict stress profiles (hence create reliable designs) for containers such as bunkers or silos. In particular, stress fluctuations, which are not accounted for in standard granular design models, can be very large as granular materials flows, and one result is frequent catastrophic failure of granular devices.

  4. Antineutrophil cytoplasmic autoantibody-associated small-vessel vasculitis

    NARCIS (Netherlands)

    Kallenberg, Cees G. M.

    Purpose of reviews This review focuses on recent advance in the diagnosis pathogenesis and treatment of antineutrophil cytoplasmic autoantibody-associated small-vessel vasculitis. Recent findings Antineutrophil cytoplasmic autoantibodies are closely associated with Wegener's granulomatosis and

  5. Consideration of reinforcement mechanism in the short fiber mixing granular materials by granular element simulations

    Science.gov (United States)

    Mori, Kentaro; Kaneko, Kenji; Hashizume, Yutaka

    2017-06-01

    The short fiber mixing method is well known as one of the method to improve the strength of gran- ular soils in geotechnical engineering. Mechanical properties of the short fiber mixing granular materials are influenced by many factors, such as the mixture ratio of the short fiber, the material of short fiber, the length, and the orientation. In particular, the mixture ratio of the short fibers is very important in mixture design. In the past study, we understood that the strength is reduced by too much short fiber mixing by a series of tri-axial compression experiments. Namely, there is "optimum mixture ratio" in the short fiber mixing granular soils. In this study, to consider the mechanism of occurrence of the optimum mixture ratio, we carried out the numerical experiments by granular element method. As the results, we can understand that the strength decrease when too much grain-fiber contact points exist, because a friction coefficient is smaller than the grain-grain contact points.

  6. Storage and discharge of a granular fluid

    NARCIS (Netherlands)

    Pacheco-Martinez, Hector; van Gerner, H.J.; Ruiz-Suarez, J.C.

    2008-01-01

    Experiments and computational simulations are carried out to study the behavior of a granular column in a silo whose walls are able to vibrate horizontally. The column is brought to a steady fluidized state and it behaves similar to a hydrostatic system. We study the dynamics of the granular

  7. Fundus autofluorescence patterns in primary intraocular lymphoma.

    Science.gov (United States)

    Casady, Megan; Faia, Lisa; Nazemzadeh, Maryam; Nussenblatt, Robert; Chan, Chi-Chao; Sen, H Nida

    2014-02-01

    To evaluate fundus autofluorescence (FAF) patterns in patients with primary intraocular (vitreoretinal) lymphoma. Records of all patients with primary intraocular lymphoma who underwent FAF imaging at the National Eye Institute were reviewed. Fundus autofluorescence patterns were evaluated with respect to clinical disease status and the findings on fluorescein angiography and spectral-domain optical coherence tomography. There were 18 eyes (10 patients) with primary intraocular lymphoma that underwent FAF imaging. Abnormal autofluorescence in the form of granular hyperautofluorescence and hypoautofluorescence was seen in 11 eyes (61%), and blockage by mass lesion was seen in 2 eyes (11%). All eyes with granular pattern on FAF had active primary intraocular lymphoma at the time of imaging, but there were 5 eyes with unremarkable FAF, which were found to have active lymphoma. The most common pattern on fluorescein angiography was hypofluorescent round spots with a "leopard spot" appearance (43%). These hypofluorescent spots on fluorescein angiography correlated with hyperautofluorescent spots on FAF in 5 eyes (36%) (inversion of FAF). Nodular hyperreflective spots at the level of retinal pigment epithelium on optical coherence tomography were noted in 43% of eyes. The hyperautofluorescent spots on FAF correlated with nodular hyperreflective spots on optical coherence tomography in 6 eyes (43%). Granularity on FAF was associated with active lymphoma in majority of the cases. An inversion of FAF (hyperautofluorescent spots on FAF corresponding to hypofluorescent spots on fluorescein angiography) was observed in less than half of the eyes.

  8. The role of fluid viscosity in an immersed granular collapse

    Science.gov (United States)

    Yang, Geng Chao; Kwok, Chung Yee; Sobral, Yuri Dumaresq

    2017-06-01

    Instabilities of immersed slopes and cliffs can lead to catastrophic events that involve a sudden release of huge soil mass. The scaled deposit height and runout distance are found to follow simple power laws when a granular column collapses on a horizontal plane. However, if the granular column is submerged in a fluid, the mobility of the granular collapse due to high inertia effects will be reduced by fluid-particle interactions. In this study, the effects of fluid viscosity on granular collapse is investigated qualitatively by adopting a numerical approach based on the coupled lattice Boltzmann method (LBM) and discrete element method (DEM). It is found that the granular collapse can be dramatically slowed down due to the presence of viscous fluids. For the considered granular configuration, when the fluid viscosity increases. the runout distance decreases and the final deposition shows a larger deposit angle.

  9. The role of fluid viscosity in an immersed granular collapse

    Directory of Open Access Journals (Sweden)

    Yang Geng Chao

    2017-01-01

    Full Text Available Instabilities of immersed slopes and cliffs can lead to catastrophic events that involve a sudden release of huge soil mass. The scaled deposit height and runout distance are found to follow simple power laws when a granular column collapses on a horizontal plane. However, if the granular column is submerged in a fluid, the mobility of the granular collapse due to high inertia effects will be reduced by fluid-particle interactions. In this study, the effects of fluid viscosity on granular collapse is investigated qualitatively by adopting a numerical approach based on the coupled lattice Boltzmann method (LBM and discrete element method (DEM. It is found that the granular collapse can be dramatically slowed down due to the presence of viscous fluids. For the considered granular configuration, when the fluid viscosity increases. the runout distance decreases and the final deposition shows a larger deposit angle.

  10. The molecular mechanism and physiological role of cytoplasmic streaming.

    Science.gov (United States)

    Tominaga, Motoki; Ito, Kohji

    2015-10-01

    Cytoplasmic streaming occurs widely in plants ranging from algae to angiosperms. However, the molecular mechanism and physiological role of cytoplasmic streaming have long remained unelucidated. Recent molecular genetic approaches have identified specific myosin members (XI-2 and XI-K as major and XI-1, XI-B, and XI-I as minor motive forces) for the generation of cytoplasmic streaming among 13 myosin XIs in Arabidopsis thaliana. Simultaneous knockout of these myosin XI members led to a reduced velocity of cytoplasmic streaming and marked defects of plant development. Furthermore, the artificial modifications of myosin XI-2 velocity changed plant and cell sizes along with the velocity of cytoplasmic streaming. Therefore, we assume that cytoplasmic streaming is one of the key regulators in determining plant size. Copyright © 2015 The Authors. Published by Elsevier Ltd.. All rights reserved.

  11. Energy decay in a granular gas collapse

    International Nuclear Information System (INIS)

    Almazán, Lidia; Serero, Dan; Pöschel, Thorsten; Salueña, Clara

    2017-01-01

    An inelastic hard ball bouncing repeatedly off the ground comes to rest in finite time by performing an infinite number of collisions. Similarly, a granular gas under the influence of external gravity, condenses at the bottom of the confinement due to inelastic collisions. By means of hydrodynamical simulations, we find that the condensation process of a granular gas reveals a similar dynamics as the bouncing ball. Our result is in agreement with both experiments and particle simulations, but disagrees with earlier simplified hydrodynamical description. Analyzing the result in detail, we find that the adequate modeling of pressure plays a key role in continuum modeling of granular matter. (paper)

  12. Periurethral granular cell tumor: a case report

    International Nuclear Information System (INIS)

    Kim, Jeong Kon; Choi, Hyo Gyeong; Cho, Kyoung Sik

    1998-01-01

    Granular cell tumors are uncommon soft tissue tumors which arise as solitary or multiple masses. Lesions commonly arise in the head, neck, and chest wall, but can occur in any part of the body. To our knowledge, periurethral granular cell tumor has not been previously reported. We report one such case

  13. Granular motor in the non-Brownian limit

    NARCIS (Netherlands)

    Oyarte Galvez, Loreto Alejandra; van der Meer, Roger M.

    2016-01-01

    In this work we experimentally study a granular rotor which is similar to the famous Smoluchowski–Feynman device and which consists of a rotor with four vanes immersed in a granular gas. Each side of the vanes can be composed of two different materials, creating a rotational asymmetry and turning

  14. Cytoplasmic chromatin triggers inflammation in senescence and cancer.

    Science.gov (United States)

    Dou, Zhixun; Ghosh, Kanad; Vizioli, Maria Grazia; Zhu, Jiajun; Sen, Payel; Wangensteen, Kirk J; Simithy, Johayra; Lan, Yemin; Lin, Yanping; Zhou, Zhuo; Capell, Brian C; Xu, Caiyue; Xu, Mingang; Kieckhaefer, Julia E; Jiang, Tianying; Shoshkes-Carmel, Michal; Tanim, K M Ahasan Al; Barber, Glen N; Seykora, John T; Millar, Sarah E; Kaestner, Klaus H; Garcia, Benjamin A; Adams, Peter D; Berger, Shelley L

    2017-10-19

    Chromatin is traditionally viewed as a nuclear entity that regulates gene expression and silencing. However, we recently discovered the presence of cytoplasmic chromatin fragments that pinch off from intact nuclei of primary cells during senescence, a form of terminal cell-cycle arrest associated with pro-inflammatory responses. The functional significance of chromatin in the cytoplasm is unclear. Here we show that cytoplasmic chromatin activates the innate immunity cytosolic DNA-sensing cGAS-STING (cyclic GMP-AMP synthase linked to stimulator of interferon genes) pathway, leading both to short-term inflammation to restrain activated oncogenes and to chronic inflammation that associates with tissue destruction and cancer. The cytoplasmic chromatin-cGAS-STING pathway promotes the senescence-associated secretory phenotype in primary human cells and in mice. Mice deficient in STING show impaired immuno-surveillance of oncogenic RAS and reduced tissue inflammation upon ionizing radiation. Furthermore, this pathway is activated in cancer cells, and correlates with pro-inflammatory gene expression in human cancers. Overall, our findings indicate that genomic DNA serves as a reservoir to initiate a pro-inflammatory pathway in the cytoplasm in senescence and cancer. Targeting the cytoplasmic chromatin-mediated pathway may hold promise in treating inflammation-related disorders.

  15. The pattern of distribution of laminin in neurogenic tumors, granular cell tumors, and nevi of the oral mucosa

    DEFF Research Database (Denmark)

    Reibel, J; Wewer, U; Albrechtsen, R

    1985-01-01

    . Accentuated staining was seen in Verocay bodies. In granular cell myoblastomas (GCM), small groups of tumor cells were encircled by laminin-positive material, whereas individual tumor cells were unstained. In nevi, diffusely spread nevus cells were surrounded by a rim of laminin, whereas when arranged...

  16. Long runout landslides: a solution from granular mechanics

    Directory of Open Access Journals (Sweden)

    Stanislav eParez

    2015-10-01

    Full Text Available Large landslides exhibit surprisingly long runout distances compared to a rigid body sliding from the same slope, and the mechanism of this phenomena has been studied for decades. This paper shows that the observed long runouts can be explained quite simply via a granular pile flowing downhill, while collapsing and spreading, without the need for frictional weakening that has traditionally been suggested to cause long runouts. Kinematics of the granular flow is divided into center of mass motion and spreading due to flattening of the flowing mass. We solve the center of mass motion analytically based on a frictional law valid for granular flow, and find that center of mass runout is similar to that of a rigid body. Based on the shape of deposits observed in experiments with collapsing granular columns and numerical simulations of landslides, we derive a spreading length Rf~V^1/3. Spreading of a granular pile, leading to a deposit angle much lower than the angle of repose or the dynamic friction angle, is shown to be an important, often dominating, contribution to the total runout distance, accounting for the long runouts observed for natural landslides.

  17. Surface instabilities in shock loaded granular media

    Science.gov (United States)

    Kandan, K.; Khaderi, S. N.; Wadley, H. N. G.; Deshpande, V. S.

    2017-12-01

    The initiation and growth of instabilities in granular materials loaded by air shock waves are investigated via shock-tube experiments and numerical calculations. Three types of granular media, dry sand, water-saturated sand and a granular solid comprising PTFE spheres were experimentally investigated by air shock loading slugs of these materials in a transparent shock tube. Under all shock pressures considered here, the free-standing dry sand slugs remained stable while the shock loaded surface of the water-saturated sand slug became unstable resulting in mixing of the shocked air and the granular material. By contrast, the PTFE slugs were stable at low pressures but displayed instabilities similar to the water-saturated sand slugs at higher shock pressures. The distal surfaces of the slugs remained stable under all conditions considered here. Eulerian fluid/solid interaction calculations, with the granular material modelled as a Drucker-Prager solid, reproduced the onset of the instabilities as seen in the experiments to a high level of accuracy. These calculations showed that the shock pressures to initiate instabilities increased with increasing material friction and decreasing yield strain. Moreover, the high Atwood number for this problem implied that fluid/solid interaction effects were small, and the initiation of the instability is adequately captured by directly applying a pressure on the slug surface. Lagrangian calculations with the directly applied pressures demonstrated that the instability was caused by spatial pressure gradients created by initial surface perturbations. Surface instabilities are also shown to exist in shock loaded rear-supported granular slugs: these experiments and calculations are used to infer the velocity that free-standing slugs need to acquire to initiate instabilities on their front surfaces. The results presented here, while in an idealised one-dimensional setting, provide physical understanding of the conditions required to

  18. Distrofia corneal granular

    Directory of Open Access Journals (Sweden)

    Alexeide de la C Castillo Pérez

    Full Text Available Las distrofias corneales constituyen un conjunto de enfermedades que presentan, en su mayoría, una baja incidencia y se caracterizan por acúmulo de material hialino o amiloide que disminuyen la transparencia corneal. La distrofia granular es una enfermedad autosómica dominante que presenta opacidades grises en el estroma superficial central de la córnea y se hacen visibles en la primera y segunda décadas de la vida, lo que provoca disminución de la visión más significativa cerca de los 40 años de edad. Presentamos dos casos clínicos de distrofia granular en pacientes hermanos de diferentes sexos, quienes acudieron a la consulta y refirieron visión nublada. El estudio de la historia familiar nos ayuda en el correcto diagnóstico y la biomicroscopia constituye el elemento más importante.

  19. Cytoplasmic streaming velocity as a plant size determinant.

    Science.gov (United States)

    Tominaga, Motoki; Kimura, Atsushi; Yokota, Etsuo; Haraguchi, Takeshi; Shimmen, Teruo; Yamamoto, Keiichi; Nakano, Akihiko; Ito, Kohji

    2013-11-11

    Cytoplasmic streaming is active transport widely occurring in plant cells ranging from algae to angiosperms. Although it has been revealed that cytoplasmic streaming is generated by organelle-associated myosin XI moving along actin bundles, the fundamental function in plants remains unclear. We generated high- and low-speed chimeric myosin XI by replacing the motor domains of Arabidopsis thaliana myosin XI-2 with those of Chara corallina myosin XI and Homo sapiens myosin Vb, respectively. Surprisingly, the plant sizes of the transgenic Arabidopsis expressing high- and low-speed chimeric myosin XI-2 were larger and smaller, respectively, than that of the wild-type plant. This size change correlated with acceleration and deceleration, respectively, of cytoplasmic streaming. Our results strongly suggest that cytoplasmic streaming is a key determinant of plant size. Furthermore, because cytoplasmic streaming is a common system for intracellular transport in plants, our system could have applications in artificial size control in plants. Copyright © 2013 Elsevier Inc. All rights reserved.

  20. Small-signal analysis of granular semiconductors

    Energy Technology Data Exchange (ETDEWEB)

    Varpula, Aapo; Sinkkonen, Juha; Novikov, Sergey, E-mail: aapo.varpula@tkk.f [Department of Micro and Nanosciences, Aalto University, PO Box 13500, FI-00076 Aalto, Espoo (Finland)

    2010-11-01

    The small-signal ac response of granular n-type semiconductors is calculated analytically using the drift-diffusion theory when electronic trapping at grain boundaries is present. An electrical equivalent circuit (EEC) model of a granular n-type semiconductor is presented. The analytical model is verified with numerical simulation performed by SILVACO ATLAS. The agreement between the analytical and numerical results is very good in a broad frequency range at low dc bias voltages.

  1. Small-signal analysis of granular semiconductors

    International Nuclear Information System (INIS)

    Varpula, Aapo; Sinkkonen, Juha; Novikov, Sergey

    2010-01-01

    The small-signal ac response of granular n-type semiconductors is calculated analytically using the drift-diffusion theory when electronic trapping at grain boundaries is present. An electrical equivalent circuit (EEC) model of a granular n-type semiconductor is presented. The analytical model is verified with numerical simulation performed by SILVACO ATLAS. The agreement between the analytical and numerical results is very good in a broad frequency range at low dc bias voltages.

  2. Applicability and trends of anaerobic granular sludge treatment processes

    International Nuclear Information System (INIS)

    Lim, Seung Joo; Kim, Tak-Hyun

    2014-01-01

    Anaerobic granular sludge treatment processes have been continuously developed, although the anaerobic sludge granulation process was not clearly understood. In this review, an upflow anaerobic sludge blanket (UASB), an expanded granule sludge blanket (EGSB), and a static granular bed reactor (SGBR) were introduced as components of a representative anaerobic granular sludge treatment processes. The characteristics and application trends of each reactor were presented. The UASB reactor was developed in the late 1970s and its use has been rapidly widespread due to the excellent performance. With the active granules, this reactor is able to treat various high-strength wastewaters as well as municipal wastewater. Most soluble industrial wastewaters can be efficiently applied using a UASB. The EGSB reactor was developed owing to give more chance to contact between wastewater and the granules. Dispersed sludge is separated from mature granules using the rapid upward velocity in this reactor. The EGSB reactor shows the excellent performance in treating low-strength and/or high-strength wastewater, especially under low temperatures. The SGBR, developed at Iowa State University, is one of anaerobic granular sludge treatment processes. Although the configuration of the SGBR is very simple, the performance of this system is similar to that of the UASB or EGSB reactor. The anaerobic sludge granulation processes showed excellent performance for various wastewaters at a broad range of organic loading rate in lab-, pilot-scale tests. This leads to erect thousands of full-scale granular processes, which has been widely operated around the world. -- Highlights: • Anaerobic sludge granulation is a key parameter for maintaining granular processes. • Anaerobic granular digestion processes are applicable for various wastewaters. • The UASB is an economic high-rate anaerobic granular process. • The EGSB can treat high-strength wastewater using expanding granules. • The SGBR is

  3. Oblique shock waves in granular flows over bluff bodies

    Directory of Open Access Journals (Sweden)

    Gopan Nandu

    2017-01-01

    Full Text Available Granular flows around an object have been the focus of numerous analytical, experimental and simulation studies. The structure and nature of the oblique shock wave developed when a quasi-two dimensional flow of spherical granular particles streams past an immersed, fixed cylindrical obstacle forms the focus of this study. The binary granular mixture, consisting of particles of the same diameter but different material properties, is investigated by using a modified LIGGGHTS package as the simulation engine. Variations in the solid fraction and granular temperature within the resulting flow are studied. The Mach number is calculated and is used to distinguish between the subsonic and the supersonic regions of the bow shock.

  4. 76 FR 8774 - Granular Polytetrafluoroethylene Resin From Japan

    Science.gov (United States)

    2011-02-15

    ... INTERNATIONAL TRADE COMMISSION [Investigation No. 731-TA-386 (Third Review)] Granular Polytetrafluoroethylene Resin From Japan AGENCY: United States International Trade Commission. ACTION: Termination of five... revocation of the antidumping duty order on granular polytetrafluoroethylene resin from Japan would be likely...

  5. Coherent structures in granular crystals from experiment and modelling to computation and mathematical analysis

    CERN Document Server

    Chong, Christopher

    2018-01-01

    This book summarizes a number of fundamental developments at the interface of granular crystals and the mathematical and computational analysis of some of their key localized nonlinear wave solutions. The subject presents a blend of the appeal of granular crystals as a prototypical engineering tested for a variety of diverse applications, the novelty in the nonlinear physics of its coherent structures, and the tractability of a series of mathematical and computational techniques to analyse them. While the focus is on principal one-dimensional solutions such as shock waves, traveling waves, and discrete breathers, numerous extensions of the discussed patterns, e.g., in two dimensions, chains with defects, heterogeneous settings, and other recent developments are discussed. The book appeals to researchers in the field, as well as for graduate and advanced undergraduate students. It will be of interest to mathematicians, physicists and engineers alike.

  6. Effect of Bed Depth on Granular Flow and Homogenization in a Vertical Bladed Mixer via Discrete Element Method

    Czech Academy of Sciences Publication Activity Database

    Barczi, T.; Trávníčková, Tereza; Havlica, Jaromír; Kohout, M.

    2015-01-01

    Roč. 38, č. 7 (2015), s. 1195-1202 ISSN 0930-7516 R&D Projects: GA ČR(CZ) GAP105/12/0664 Institutional support: RVO:67985858 Keywords : granular mixing * DEM * flow patterns Subject RIV: CI - Industrial Chemistry, Chemical Engineering Impact factor: 2.385, year: 2015

  7. Collapse of tall granular columns in fluid

    Science.gov (United States)

    Kumar, Krishna; Soga, Kenichi; Delenne, Jean-Yves

    2017-06-01

    Avalanches, landslides, and debris flows are geophysical hazards, which involve rapid mass movement of granular solids, water, and air as a multi-phase system. In order to describe the mechanism of immersed granular flows, it is important to consider both the dynamics of the solid phase and the role of the ambient fluid. In the present study, the collapse of a granular column in fluid is studied using 2D LBM - DEM. The flow kinematics are compared with the dry and buoyant granular collapse to understand the influence of hydrodynamic forces and lubrication on the run-out. In the case of tall columns, the amount of material destabilised above the failure plane is larger than that of short columns. Therefore, the surface area of the mobilised mass that interacts with the surrounding fluid in tall columns is significantly higher than the short columns. This increase in the area of soil - fluid interaction results in an increase in the formation of turbulent vortices thereby altering the deposit morphology. It is observed that the vortices result in the formation of heaps that significantly affects the distribution of mass in the flow. In order to understand the behaviour of tall columns, the run-out behaviour of a dense granular column with an initial aspect ratio of 6 is studied. The collapse behaviour is analysed for different slope angles: 0°, 2.5°, 5° and 7.5°.

  8. Traffic and Granular Flow '11

    CERN Document Server

    Buslaev, Alexander; Bugaev, Alexander; Yashina, Marina; Schadschneider, Andreas; Schreckenberg, Michael; TGF11

    2013-01-01

    This book continues the biannual series of conference proceedings, which has become a classical reference resource in traffic and granular research alike. It addresses new developments at the interface between physics, engineering and computational science. Complex systems, where many simple agents, be they vehicles or particles, give rise to surprising and fascinating phenomena.   The contributions collected in these proceedings cover several research fields, all of which deal with transport. Topics include highway, pedestrian and internet traffic, granular matter, biological transport, transport networks, data acquisition, data analysis and technological applications. Different perspectives, i.e. modeling, simulations, experiments and phenomenological observations, are considered.

  9. A particle-based method for granular flow simulation

    KAUST Repository

    Chang, Yuanzhang; Bao, Kai; Zhu, Jian; Wu, Enhua

    2012-01-01

    We present a new particle-based method for granular flow simulation. In the method, a new elastic stress term, which is derived from a modified form of the Hooke's law, is included in the momentum governing equation to handle the friction of granular materials. Viscosity force is also added to simulate the dynamic friction for the purpose of smoothing the velocity field and further maintaining the simulation stability. Benefiting from the Lagrangian nature of the SPH method, large flow deformation can be well handled easily and naturally. In addition, a signed distance field is also employed to enforce the solid boundary condition. The experimental results show that the proposed method is effective and efficient for handling the flow of granular materials, and different kinds of granular behaviors can be well simulated by adjusting just one parameter. © 2012 Science China Press and Springer-Verlag Berlin Heidelberg.

  10. A particle-based method for granular flow simulation

    KAUST Repository

    Chang, Yuanzhang

    2012-03-16

    We present a new particle-based method for granular flow simulation. In the method, a new elastic stress term, which is derived from a modified form of the Hooke\\'s law, is included in the momentum governing equation to handle the friction of granular materials. Viscosity force is also added to simulate the dynamic friction for the purpose of smoothing the velocity field and further maintaining the simulation stability. Benefiting from the Lagrangian nature of the SPH method, large flow deformation can be well handled easily and naturally. In addition, a signed distance field is also employed to enforce the solid boundary condition. The experimental results show that the proposed method is effective and efficient for handling the flow of granular materials, and different kinds of granular behaviors can be well simulated by adjusting just one parameter. © 2012 Science China Press and Springer-Verlag Berlin Heidelberg.

  11. Neurohypophysis granular cell tumours. Upon neurohypophysis rare tumours

    International Nuclear Information System (INIS)

    Barrande, G.; Kujas, M.; Gancel, A.; Turpin, G.; Bruckert, E.; Kuhn, J.M.; Luton, J.P.

    1995-01-01

    Granular cell tumours of neurohypophysis are rare. These tumours are more often encountered as incidental autopsy findings seen in up to 17 % of unselected adult autopsy cases. There are few reports of para-sellar granular cell tumours large enough to cause symptoms. We present three cases of neurohypophysis granular cell tumour and a review of the literature. In one patient, the asymptomatic granular cell tumour was incidentally discovered at surgical removal of a corticotrophic micro-adenoma. The remaining 2 patients had a symptomatic tumour which caused neurological symptoms such as visual disturbance and headaches and endocrine disorders such as hypopituitarism or hyper-prolactinaemia. In these 2 cases, computerized tomography showed a well-circumscribed, contrast-enhanced, intra-sellar and supra-sellar mass. Magnetic resonance imaging demonstrated an isointense gadolinium-enhanced mass in T1-weighted-images. Trans-sphenoidal partial resection was performed and histology was interpreted as a granular cell tumour. The immunohistochemical study was positive for glial fibrillary acidic protein (GEAP) and neuron specific enolase (NSE) in 1 of the 2 tumours and positive for S100 protein and vimentin in both tumours but negative for CD68. The histogenesis of neurohypophysis granular cell tumours is still controversial but ultrastructural and immunohistochemical studies support the theory that may arise from pituicytes, the glial cells of neurohypophysis. Management of these benign, slow growing, tumours is based mainly on neurosurgical resection. Data from the literature do not support a beneficial effect of post operative radiation therapy on postoperative recurrences. (authors). 23 refs., 4 figs., 1 tab

  12. Granular Cell Tumor

    African Journals Online (AJOL)

    1). Her packed cell volume was 40%, she was system, gastro-intestinal tract, brain, heart, and negative to human immunodeficiency virus. 2 female reproductive . ... histocytes and neurons at various times. They granules. The granules are probably of lysosmal were consequently termed granular cell origin and contain ...

  13. Development of granular powder manufacturing technology by spray pyrolysis

    International Nuclear Information System (INIS)

    Katoh, Yoshiyuki; Kawase, Keiichi; Takahashi, Yoshiharu; Todokoro, Akio

    1996-01-01

    For shortening of mixed-oxide (MOX) fuel manufacturing process and improvement in treatment of MOX-powder, we have been developing the granular powder production technology. Since the granular powders have excellent fluidity owing to the spherical shape, there is the possibility of modifying scattering and adcering of the powder in the process equipment. In this paper, spray pyrolysis process in adopted as the process of manufacturing the granular powders and the basic feasibility study has been carried out. The experimental results show that the manufactured granular powders have excellent fluidity and the diameter of the powders is controllable. Furthermore, high density pellets are formed by sintering the powders. Thus, it is clarified that this process is promising for the actual MOX fuel fabrication. (author)

  14. Enhanced selection of micro-aerobic pentachlorophenol degrading granular sludge

    Energy Technology Data Exchange (ETDEWEB)

    Lv, Yuancai, E-mail: donkey1204@hotmail.com [State Key Laboratory of Pulp and Paper Engineering, College of Light Industry and Food Science, South China University of Technology, Guangzhou 510640 (China); Chen, Yuancai, E-mail: chenyc@scut.edu.cn [State Key Laboratory of Pulp and Paper Engineering, College of Light Industry and Food Science, South China University of Technology, Guangzhou 510640 (China); Ministry of Education Key Laboratory of Pollution Control and Ecological Remediation for Industrial Agglomeration Area, College of Environment and Energy, South China University of Technology, Guangzhou 510006 (China); Song, Wenzhe, E-mail: songwenzhe007@126.com [Ministry of Education Key Laboratory of Pollution Control and Ecological Remediation for Industrial Agglomeration Area, College of Environment and Energy, South China University of Technology, Guangzhou 510006 (China); Hu, Yongyou, E-mail: ppyyhu@scut.edu.cn [State Key Laboratory of Pulp and Paper Engineering, College of Light Industry and Food Science, South China University of Technology, Guangzhou 510640 (China); Ministry of Education Key Laboratory of Pollution Control and Ecological Remediation for Industrial Agglomeration Area, College of Environment and Energy, South China University of Technology, Guangzhou 510006 (China)

    2014-09-15

    Graphical abstract: In this work, an aerobic column reactor was placed before the USB to maintain micro-oxygen condition in the reactor and the micro-aerobic pentachlorophenol (PCP) degrading granular sludge under oxygen-limited conditions (0.1–0.2 mg L{sup −1}) was successfully obtained. PCP degradation by the micro-aerobic system was studied and the variance of microbial community was also discussed by using PCR-DGGE analysis. - Highlights: • Micro-aerobic granular sludge was cultivated in column-type combined reactors. • PCP biodegradation, VFA accumulation and biogas production were studied. • The function of Methanogenic archaeon in the system was investigated. • Fluctuation and diversity of microbial community were discussed by DGGE analysis. • The dominated microorganisms were identified by 16S rDNA sequences. - Abstract: Column-type combined reactors were designed to cultivate micro-aerobic pentachlorophenol (PCP) degrading granular sludge under oxygen-limited conditions (0.1–0.2 mg L{sup −1}) over 39-day experimental period. Micro-aerobic granular had both anaerobic activity (SMA: 2.34 mMCH{sub 4}/h g VSS) and aerobic activity (SOUR: 2.21 mMO{sub 2}/h g VSS). Metabolite analysis results revealed that PCP was sequentially dechlorinated to TCP, DCP, and eventually to MCP. Methanogens were not directly involved in the dechlorination of PCP, but might played a vital role in stabilizing the overall structure of the granule sludge. For Eubacteria, the Shannon Index (2.09 in inoculated granular sludge) increased both in micro-aerobic granular sludge (2.61) and PCP-degradation granular sludge (2.55). However, for Archaea, it decreased from 2.53 to 1.85 and 1.84, respectively. Although the Shannon Index demonstrated slight difference between micro-aerobic granular sludge and PCP-degradation granular sludge, the Principal Component Analysis (PCA) indicated obvious variance of the microbial composition, revealing significant effect of micro

  15. Enhanced selection of micro-aerobic pentachlorophenol degrading granular sludge

    International Nuclear Information System (INIS)

    Lv, Yuancai; Chen, Yuancai; Song, Wenzhe; Hu, Yongyou

    2014-01-01

    Graphical abstract: In this work, an aerobic column reactor was placed before the USB to maintain micro-oxygen condition in the reactor and the micro-aerobic pentachlorophenol (PCP) degrading granular sludge under oxygen-limited conditions (0.1–0.2 mg L −1 ) was successfully obtained. PCP degradation by the micro-aerobic system was studied and the variance of microbial community was also discussed by using PCR-DGGE analysis. - Highlights: • Micro-aerobic granular sludge was cultivated in column-type combined reactors. • PCP biodegradation, VFA accumulation and biogas production were studied. • The function of Methanogenic archaeon in the system was investigated. • Fluctuation and diversity of microbial community were discussed by DGGE analysis. • The dominated microorganisms were identified by 16S rDNA sequences. - Abstract: Column-type combined reactors were designed to cultivate micro-aerobic pentachlorophenol (PCP) degrading granular sludge under oxygen-limited conditions (0.1–0.2 mg L −1 ) over 39-day experimental period. Micro-aerobic granular had both anaerobic activity (SMA: 2.34 mMCH 4 /h g VSS) and aerobic activity (SOUR: 2.21 mMO 2 /h g VSS). Metabolite analysis results revealed that PCP was sequentially dechlorinated to TCP, DCP, and eventually to MCP. Methanogens were not directly involved in the dechlorination of PCP, but might played a vital role in stabilizing the overall structure of the granule sludge. For Eubacteria, the Shannon Index (2.09 in inoculated granular sludge) increased both in micro-aerobic granular sludge (2.61) and PCP-degradation granular sludge (2.55). However, for Archaea, it decreased from 2.53 to 1.85 and 1.84, respectively. Although the Shannon Index demonstrated slight difference between micro-aerobic granular sludge and PCP-degradation granular sludge, the Principal Component Analysis (PCA) indicated obvious variance of the microbial composition, revealing significant effect of micro-aerobic condition and

  16. 2D transient granular flows over obstacles: experimental and numerical work

    Science.gov (United States)

    Juez, Carmelo; Caviedes-Voullième, Daniel; Murillo, Javier; García-Navarro, Pilar

    2016-04-01

    Landslides are an ubiquitous natural hazard, and therefore human infrastructure and settlements are often at risk in mountainous regions. In order to better understand and predict landslides, systematic studies of the phenomena need to be undertaken. In particular, computational tools which allow for analysis of field problems require to be thoroughly tested, calibrated and validated under controlled conditions. And to do so, it is necessary for such controlled experiments to be fully characterized in the same terms as the numerical model requires. This work presents an experimental study of dry granular flow over a rough bed with topography which resembles a mountain valley. It has an upper region with a very high slope. The geometry of the bed describes a fourth order polynomial curve, with a low point with zero slope, and afterwards a short region with adverse slope. Obstacles are present in the lower regions which are used as model geometries of human structures. The experiments consisted of a sudden release a mass of sand on the upper region, and allowing it to flow downslope. Furthermore, it has been frequent in previous studies to measure final states of the granular mass at rest, but seldom has transient data being provided, and never for the entire field. In this work we present transient measurements of the moving granular surfaces, obtained with a consumer-grade RGB-D sensor. The sensor, developed for the videogame industry, allows to measure the moving surface of the sand, thus obtaining elevation fields. The experimental results are very consistent and repeatable. The measured surfaces clearly show the distinctive features of the granular flow around the obstacles and allow to qualitatively describe the different flow patterns. More importantly, the quantitative description of the granular surface allows for benchmarking and calibration of predictive numerical models, key in scaling the small-scale experimental knowledge into the field. In addition, as

  17. On the submerging of a spherical intruder into granular beds

    Directory of Open Access Journals (Sweden)

    Wu Chuan-Yu

    2017-01-01

    Full Text Available Granular materials are complex systems and their mechanical behaviours are determined by the material properties of individual particles, the interaction between particles and the surrounding media, which are still incompletely understood. Using an advanced discrete element method (DEM, we simulate the submerging process of a spherical projectile (an intruder into granular materials of various properties with a zero penetration velocity (i.e. the intruder is touching the top surface of the granular bed and released from stationary and examine its settling behaviour. By systematically changing the density and size of the intruder and the particle density (i.e. the density of the particles in the granular bed, we find that the intruder can sink deep into the granular bed even with a zero penetration velocity. Furthermore, we confirm that under certain conditions the granular bed can behave like a Newtonian liquid and the submerging intruder can reach a constant velocity, i.e. the terminal velocity, identical to the settling of a sphere in a liquid, as observed experimentally. A mathematical model is also developed to predict the maximum penetration depth of the intruder. The model predictions are compared with experimental data reported in the literature,good agreement was obtained, demonstrating the model can accurately predict the submerging behaviour of the intruder in the granular media.

  18. Cytoplasmic Streaming in the Drosophila Oocyte.

    Science.gov (United States)

    Quinlan, Margot E

    2016-10-06

    Objects are commonly moved within the cell by either passive diffusion or active directed transport. A third possibility is advection, in which objects within the cytoplasm are moved with the flow of the cytoplasm. Bulk movement of the cytoplasm, or streaming, as required for advection, is more common in large cells than in small cells. For example, streaming is observed in elongated plant cells and the oocytes of several species. In the Drosophila oocyte, two stages of streaming are observed: relatively slow streaming during mid-oogenesis and streaming that is approximately ten times faster during late oogenesis. These flows are implicated in two processes: polarity establishment and mixing. In this review, I discuss the underlying mechanism of streaming, how slow and fast streaming are differentiated, and what we know about the physiological roles of the two types of streaming.

  19. Jamming by compressing a system of granular crosses

    Science.gov (United States)

    Zheng, Hu; Wang, Dong; Barés, Jonathan; Behringer, Robert

    2017-06-01

    A disordered stress-free granular packing can be jammed, transformed into a mechanically rigid structure, by increasing the density of particles or by applying shear deformation. The jamming behavior of systems made of 2D circular discs has been investigated in detail, but very little is known about jamming for non-spherical particles, and particularly, non-convex particles. Here, we perform an experimental study on jamming by compression of a system of quasi-2D granular crosses made of photo-elastic crosses. We measure the pressure evolution during cyclic compression and decompression. The Jamming packing fraction of these quasi-2D granular crosses is ϕJ ≃ 0.475, which is much smaller than the value ϕJ ≃ 0.84 for-2D granular disks. The packing fraction shifts systematically to higher values under compressive cycling, corresponding to systematic shifts in the stress-strain response curves. Associated with these shifts are rotations of the crosses, with minimal changes in their centers of mass.

  20. Vortex jamming in superconductors and granular rheology

    International Nuclear Information System (INIS)

    Yoshino, Hajime; Nogawa, Tomoaki; Kim, Bongsoo

    2009-01-01

    We demonstrate that a highly frustrated anisotropic Josephson junction array (JJA) on a square lattice exhibits a zero-temperature jamming transition, which shares much in common with those in granular systems. Anisotropy of the Josephson couplings along the horizontal and vertical directions plays roles similar to normal load or density in granular systems. We studied numerically static and dynamic response of the system against shear, i.e. injection of external electric current at zero temperature. Current-voltage curves at various strength of the anisotropy exhibit universal scaling features around the jamming point much as do the flow curves in granular rheology, shear-stress versus shear-rate. It turns out that at zero temperature the jamming transition occurs right at the isotropic coupling and anisotropic JJA behaves as exotic fragile vortex matter: it behaves as a superconductor (vortex glass) in one direction, whereas it is a normal conductor (vortex liquid) in the other direction even at zero temperature. Furthermore, we find a variant of the theoretical model for the anisotropic JJA quantitatively reproduces universal master flow-curves of the granular systems. Our results suggest an unexpected common paradigm stretching over seemingly unrelated fields-the rheology of soft materials and superconductivity.

  1. The antimicrobial peptides lactoferricin B and magainin 2 cross over the bacterial cytoplasmic membrane and reside in the cytoplasm.

    Science.gov (United States)

    Haukland, H H; Ulvatne, H; Sandvik, K; Vorland, L H

    2001-11-23

    The localization of immunolabelled antimicrobial peptides was studied using transmission electron microscopy. Staphylococcus aureus and Escherichia coli were exposed to lactoferricin B (17-41), lactoferricin B (17-31) and D-lactoferricin B (17-31). E. coli was also exposed to cecropin P1 and magainin 2. The lactoferricins were found in the cytoplasm of both bacteria. In S. aureus the amount of cytoplasmic lactoferricin B (17-41) was time- and concentration-dependent, reaching a maximum within 30 min. Cecropin P1 was confined to the cell wall, while magainin 2 was found in the cytoplasm of E. coli. The finding of intracellularly localized magainin is not reported previously.

  2. A realistic large-scale model of the cerebellum granular layer predicts circuit spatio-temporal filtering properties

    Directory of Open Access Journals (Sweden)

    Sergio Solinas

    2010-05-01

    Full Text Available The way the cerebellar granular layer transforms incoming mossy fiber signals into new spike patterns to be related to Purkinje cells is not yet clear. Here, a realistic computational model of the granular layer was developed and used to address four main functional hypotheses: center-surround organization, time-windowing, high-pass filtering in responses to spike bursts and coherent oscillations in response to diffuse random activity. The model network was activated using patterns inspired by those recorded in vivo. Burst stimulation of a small mossy fiber bundle resulted in granule cell bursts delimited in time (time windowing and space (center-surround by network inhibition. This burst-burst transmission showed marked frequency-dependence configuring a high-pass filter with cut-off frequency around 100 Hz. The contrast between center and surround properties was regulated by the excitatory-inhibitory balance. The stronger excitation made the center more responsive to 10-50 Hz input frequencies and enhanced the granule cell output (with spike occurring earlier and with higher frequency and number compared to the surround. Finally, over a certain level of mossy fiber background activity, the circuit generated coherent oscillations in the theta-frequency band. All these processes were fine-tuned by NMDA and GABA-A receptor activation and neurotransmitter vesicle cycling in the cerebellar glomeruli. This model shows that available knowledge on cellular mechanisms is sufficient to unify the main functional hypotheses on the cerebellum granular layer and suggests that this network can behave as an adaptable spatio-temporal filter coordinated by theta-frequency oscillations.

  3. Oncocytic carcinoma of parotid gland: a case report with clinical, immunohistochemical and ultrastructural features

    Directory of Open Access Journals (Sweden)

    Giordano Giovanna

    2006-08-01

    Full Text Available Abstract Background Oncocytic carcinoma is an extremely rare neoplasm of the salivary glands. We report a case of oncocytic carcinoma arising in a parotid gland in a 66-year-old female. Method An excisional biopsy of the parotid tumor was performed. The specimen was submitted for histology and after fixation in formalin solution and inclusion in paraffin, 3–5 μm sections were stained with hematoxylin and eosin for conventional evaluation and Periodic acid Schiff stain. Immunohistochemical studies were performed using antibodies against mitochondrial antigen, keratin, S-100, alpha-actin, vimentin, alpha-1-antichymotrypsin as well as an ultrastructural analysis was performed. Results Frozen sections revealed an infiltrative growth pattern and the diagnosis of a malignant epithelial lesion was made. Permanent sections stained with haematoxylin and eosin revealed a neoplasm that had replaced a wide area of the parotid gland and had invaded subcutaneous adipose tissue. Perineural invasion was evident, but vascular invasion was not found. Neoplastic elements were large, round or polyhedral cells and were arranged in solid sheets, islands and cords. The cytoplasm was abundant, eosinophilic and finely granular. The nuclei were large and located centrally or peripherally. The nucleoli were distinct and large. Periodic acid Schiff stain demonstrated a granular cytoplasm. Immunohistochemistry demonstrated mithochondrial antigen, keratin, and chymotrypsin immunoreactivity in the neoplastic cells. Ultrastructural analysis revealed numerous mitochondria packed into the cytoplasm of the neoplastic cells. Thus, the final diagnosis was that of oncocytic carcinoma of parotid gland. Conclusion This neoplasm shows clinical, microscopical, histological and ultrastructural features of oncocytic carcinoma and this must be considered in the differential diagnosis of other proliferations in the parotid gland with abundant granular cytoplasm and metastatic oncocytic

  4. CTP synthase forms cytoophidia in the cytoplasm and nucleus

    International Nuclear Information System (INIS)

    Gou, Ke-Mian; Chang, Chia-Chun; Shen, Qing-Ji; Sung, Li-Ying; Liu, Ji-Long

    2014-01-01

    CTP synthase is an essential metabolic enzyme responsible for the de novo synthesis of CTP. Multiple studies have recently showed that CTP synthase protein molecules form filamentous structures termed cytoophidia or CTP synthase filaments in the cytoplasm of eukaryotic cells, as well as in bacteria. Here we report that CTP synthase can form cytoophidia not only in the cytoplasm, but also in the nucleus of eukaryotic cells. Both glutamine deprivation and glutamine analog treatment promote formation of cytoplasmic cytoophidia (C-cytoophidia) and nuclear cytoophidia (N-cytoophidia). N-cytoophidia are generally shorter and thinner than their cytoplasmic counterparts. In mammalian cells, both CTP synthase 1 and CTP synthase 2 can form cytoophidia. Using live imaging, we have observed that both C-cytoophidia and N-cytoophidia undergo multiple rounds of fusion upon glutamine analog treatment. Our study reveals the coexistence of cytoophidia in the cytoplasm and nucleus, therefore providing a good opportunity to investigate the intracellular compartmentation of CTP synthase. - Highlights: • CTP synthase forms cytoophidia not only in the cytoplasm but also in the nucleus. • Glutamine deprivation and Glutamine analogs promotes cytoophidium formation. • N-cytoophidia exhibit distinct morphology when compared to C-cytoophidia. • Both CTP synthase 1 and CTP synthase 2 form cytoophidia in mammalian cells. • Fusions of cytoophidia occur in the cytoplasm and nucleus

  5. CTP synthase forms cytoophidia in the cytoplasm and nucleus

    Energy Technology Data Exchange (ETDEWEB)

    Gou, Ke-Mian [MRC Functional Genomics Unit, Department of Physiology, Anatomy and Genetics, University of Oxford, Oxford OX1 3PT (United Kingdom); State Key Laboratory for Agrobiotechnology, College of Biological Sciences, China Agricultural University, Beijing 100193 (China); Chang, Chia-Chun [Institute of Biotechnology, National Taiwan University, Taipei, Taiwan, ROC (China); Shen, Qing-Ji [MRC Functional Genomics Unit, Department of Physiology, Anatomy and Genetics, University of Oxford, Oxford OX1 3PT (United Kingdom); Sung, Li-Ying, E-mail: liyingsung@ntu.edu.tw [Institute of Biotechnology, National Taiwan University, Taipei, Taiwan, ROC (China); Agricultural Biotechnology Research Center, Academia Sinica, Taipei 115, Taiwan, ROC (China); Liu, Ji-Long, E-mail: jilong.liu@dpag.ox.ac.uk [MRC Functional Genomics Unit, Department of Physiology, Anatomy and Genetics, University of Oxford, Oxford OX1 3PT (United Kingdom)

    2014-04-15

    CTP synthase is an essential metabolic enzyme responsible for the de novo synthesis of CTP. Multiple studies have recently showed that CTP synthase protein molecules form filamentous structures termed cytoophidia or CTP synthase filaments in the cytoplasm of eukaryotic cells, as well as in bacteria. Here we report that CTP synthase can form cytoophidia not only in the cytoplasm, but also in the nucleus of eukaryotic cells. Both glutamine deprivation and glutamine analog treatment promote formation of cytoplasmic cytoophidia (C-cytoophidia) and nuclear cytoophidia (N-cytoophidia). N-cytoophidia are generally shorter and thinner than their cytoplasmic counterparts. In mammalian cells, both CTP synthase 1 and CTP synthase 2 can form cytoophidia. Using live imaging, we have observed that both C-cytoophidia and N-cytoophidia undergo multiple rounds of fusion upon glutamine analog treatment. Our study reveals the coexistence of cytoophidia in the cytoplasm and nucleus, therefore providing a good opportunity to investigate the intracellular compartmentation of CTP synthase. - Highlights: • CTP synthase forms cytoophidia not only in the cytoplasm but also in the nucleus. • Glutamine deprivation and Glutamine analogs promotes cytoophidium formation. • N-cytoophidia exhibit distinct morphology when compared to C-cytoophidia. • Both CTP synthase 1 and CTP synthase 2 form cytoophidia in mammalian cells. • Fusions of cytoophidia occur in the cytoplasm and nucleus.

  6. Investigation of granular impact using positron emission particle tracking

    KAUST Repository

    Marston, Jeremy O.

    2015-04-01

    We present results from an experimental study of granular impact using a combination of high-speed video and positron emission particle tracking (PEPT). The PEPT technique exploits the annihilation of photons from positron decay to determine the position of tracer particles either inside a small granular bed or attached to the object which impacts the bed. We use dense spheres as impactors and the granular beds are comprised of glass beads which are fluidised to achieve a range of different initial packing states. For the first time, we have simultaneously investigated both the trajectory of the sphere, the motion of particles in a 3-D granular bed and particles which jump into the resultant jet, which arises from the collapse of the cavity formed by the impacting sphere.

  7. Paraqueratose granular: relato de seis casos em crianças Granular parakeratosis: a report of six cases in children

    Directory of Open Access Journals (Sweden)

    Susana Giraldi

    2006-02-01

    Full Text Available A paraqueratose granular é alteração da queratinização, primeiramente descrita em adultos, caracterizada por pápulas e placas hiperqueratósicas nas áreas intertriginosas. Os autores descrevem seis casos de paraqueratose granular em crianças. Um paciente apresentava lesões nas regiões glúteas, dois em ambas as axilas e região cervical (apresentações inéditas na literatura. Três pacientes apresentavam lesões em pregas inguinais. Realizam também revisão da literatura e discutem a possível etiologia dessa rara dermatose.Granular parakeratosis is an alteration of keratinization that was first described in adults. It is characterized by hiperkeratotic plaques and papules in intertriginous areas. The authors describe six cases of granular parakeratosis in children. One patient had lesions on the buttocks; two children presented papules in both axillae and cervical region (presentations never described before in the literature. The remaining three patients presented with lesions in the inguinal folds. Review of the literature and discussion on the pathogenesis of this rare dermatosis are presented.

  8. Seborrheic inclusion cyst of the skin positive for cytoplasmic inclusion bodies and HPV antigen.

    Science.gov (United States)

    Terada, Tadashi

    2012-01-01

    Seborrheic inclusion cyst (SIC) is a very rare variant of epidermal cyst of the skin. SIC shows seborrheic keratosis (SK)-like lesion in epidermal cyst. SIC is extremely rare; only 6 case reports have been published in the English literature. However, no immunohistochemical study of SIC has been reported. A 41-year-old Japanese man noticed a subcutaneous tumor in the neck. Physical examination showed slightly mobile tumor in the subcutaneous tissue, and total excision was performed. Grossly, the tumor (1 x 1 x 0.8 cm) was cyst containing atheromatous keratin. Microscopically, the lesion is a cyst containing keratins. About one half of the cyst showed features of epidermal cyst consisting of mature squamous epithelium with granular layers. The other one half showed SK-like epidermal proliferation. The SK-like area showed basaloid cell proliferation with pseudohorn cysts. No significant atypia was noted. Many eosinophilic cytoplasmic inclusion bodies were noted in the SK-like area. Immunohistochemically, the SK-like area was positive for pancytokeratin AE1/3, pancytokeratin CAM5.2, p63, and Ki-67 (labeling=8%) and HPV, but negative for p53. The pathological diagnosis was SIC.

  9. Pneumatic fractures in confined granular media.

    Science.gov (United States)

    Eriksen, Fredrik K; Toussaint, Renaud; Turquet, Antoine L; Måløy, Knut J; Flekkøy, Eirik G

    2017-06-01

    We perform experiments where air is injected at a constant overpressure P_{in}, ranging from 5 to 250 kPa, into a dry granular medium confined within a horizontal linear Hele-Shaw cell. The setup allows us to explore compacted configurations by preventing decompaction at the outer boundary, i.e., the cell outlet has a semipermeable filter such that beads are stopped while air can pass. We study the emerging patterns and dynamic growth of channels in the granular media due to fluid flow, by analyzing images captured with a high speed camera (1000 images/s). We identify four qualitatively different flow regimes, depending on the imposed overpressure, ranging from no channel formation for P_{in} below 10 kPa, to large thick channels formed by erosion and fingers merging for high P_{in} around 200 kPa. The flow regimes where channels form are characterized by typical finger thickness, final depth into the medium, and growth dynamics. The shape of the finger tips during growth is studied by looking at the finger width w as function of distance d from the tip. The tip profile is found to follow w(d)∝d^{β}, where β=0.68 is a typical value for all experiments, also over time. This indicates a singularity in the curvature d^{2}d/dw^{2}∼κ∼d^{1-2β}, but not of the slope dw/dd∼d^{β-1}, i.e., more rounded tips rather than pointy cusps, as they would be for the case β>1. For increasing P_{in}, the channels generally grow faster and deeper into the medium. We show that the channel length along the flow direction has a linear growth with time initially, followed by a power-law decay of growth velocity with time as the channel approaches its final length. A closer look reveals that the initial growth velocity v_{0} is found to scale with injection pressure as v_{0}∝P_{in}^{3/2}, while at a critical time t_{c} there is a cross-over to the behavior v(t)∝t^{-α}, where α is close to 2.5 for all experiments. Finally, we explore the fractal dimension of the fully

  10. DETECTION OF SMALL-SCALE GRANULAR STRUCTURES IN THE QUIET SUN WITH THE NEW SOLAR TELESCOPE

    International Nuclear Information System (INIS)

    Abramenko, V. I.; Yurchyshyn, V. B.; Goode, P. R.; Kitiashvili, I. N.; Kosovichev, A. G.

    2012-01-01

    Results of a statistical analysis of solar granulation are presented. A data set of 36 images of a quiet-Sun area on the solar disk center was used. The data were obtained with the 1.6 m clear aperture New Solar Telescope at Big Bear Solar Observatory and with a broadband filter centered at the TiO (705.7 nm) spectral line. The very high spatial resolution of the data (diffraction limit of 77 km and pixel scale of 0.''0375) augmented by the very high image contrast (15.5% ± 0.6%) allowed us to detect for the first time a distinct subpopulation of mini-granular structures. These structures are dominant on spatial scales below 600 km. Their size is distributed as a power law with an index of –1.8 (which is close to the Kolmogorov's –5/3 law) and no predominant scale. The regular granules display a Gaussian (normal) size distribution with a mean diameter of 1050 km. Mini-granular structures contribute significantly to the total granular area. They are predominantly confined to the wide dark lanes between regular granules and often form chains and clusters, but different from magnetic bright points. A multi-fractality test reveals that the structures smaller than 600 km represent a multi-fractal, whereas on larger scales the granulation pattern shows no multi-fractality and can be considered as a Gaussian random field. The origin, properties, and role of the population of mini-granular structures in the solar magnetoconvection are yet to be explored.

  11. Anaerobic granular sludge and biofilm reactors

    DEFF Research Database (Denmark)

    Skiadas, Ioannis V.; Gavala, Hariklia N.; Schmidt, Jens Ejbye

    2003-01-01

    by the immobilization of the biomass, which forms static biofilms, particle-supported biofilms, or granules depending on the reactor's operational conditions. The advantages of the high-rate anaerobic digestion over the conventional aerobic wastewater treatment methods has created a clear trend for the change......-rate anaerobic treatment systems based on anaerobic granular sludge and biofilm are described in this chapter. Emphasis is given to a) the Up-flow Anaerobic Sludge Blanket (UASB) systems, b) the main characteristics of the anaerobic granular sludge, and c) the factors that control the granulation process...

  12. Anisotropy in cohesive, frictional granular media

    International Nuclear Information System (INIS)

    Luding, Stefan

    2005-01-01

    The modelling of cohesive, frictional granular materials with a discrete particle molecular dynamics is reviewed. From the structure of the quasi-static granular solid, the fabric, stress, and stiffness tensors are determined, including both normal and tangential forces. The influence of the material properties on the flow behaviour is also reported, including relations between the microscopic attractive force and the macroscopic cohesion as well as the dependence of the macroscopic friction on the microscopic contact friction coefficient. Related to the dynamics, the anisotropy of both structure and stress are exponentially approaching the maximum

  13. Dynamics of electrostatically driven granular media: Effects of humidity

    International Nuclear Information System (INIS)

    Howell, D. W.; Aronson, Igor S.; Crabtree, G. W.

    2001-01-01

    We performed experimental studies of the effect of humidity on the dynamics of electrostatically driven granular materials. Both conducting and dielectric particles undergo a phase transition from an immobile state (granular solid) to a fluidized state (granular gas) with increasing applied field. Spontaneous precipitation of solid clusters from the gas phase occurs as the external driving is decreased. The clustering dynamics in conducting particles is primarily controlled by screening of the electric field but is aided by cohesion due to humidity. It is shown that humidity effects dominate the clustering process with dielectric particles

  14. Capturing 2D transient surface data of granular flows against obstacles with an RGB-D sensor

    Science.gov (United States)

    Caviedes-Voullieme, Daniel; Juez, Carmelo; Murillo, Javier; Garcia-Navarro, Pilar

    2014-05-01

    Landslides are an ubiquitous natural hazard, and therefore human infrastructure and settlements are often at risk in mountainous regions. In order to better understand and predict landslides, systematic studies of the phenomena need to be undertaken. In particular, computational tools which allow for analysis of field problems require to be thoroughly tested, calibrated and validated under controlled conditions. And to do so, it is necessary for such controlled experiments to be fully characterized in the same terms as the numerical model requires. This work presents an experimental study of dry granular flow over a rough bed with topography which resembles a mountain valley. It has an upper region with a very high slope. The geometry of the bed describes a fourth order polynomial curve, with a low point with zero slope, and afterwards a short region with adverse slope. Obstacles are present in the lower regions which are used as model geometries of human structures. The experiments consisted of a sudden release a mass of sand on the upper region, and allowing it to flow downslope. Furthermore, it has been frequent in previous studies to measure final states of the granular mass at rest, but seldom has transient data being provided, and never for the entire field. In this work we present transient measurements of the moving granular surfaces, obtained with a consumer-grade RGB-D sensor. The sensor, developed for the videogame industry, allows to measure the moving surface of the sand, thus obtaining elevation fields. The experimental results are very consistent and repeatable. The measured surfaces clearly show the distinctive features of the granular flow around the obstacles and allow to qualitatively describe the different flow patterns. More importantly, the quantitative description of the granular surface allows for benchmarking and calibration of predictive numerical models, key in scaling the small-scale experimental knowledge into the field.

  15. The Composition and Organization of Cytoplasm in Prebiotic Cells

    Directory of Open Access Journals (Sweden)

    Jack T. Trevors

    2011-03-01

    Full Text Available This article discusses the hypothesized composition and organization of cytoplasm in prebiotic cells from a theoretical perspective and also based upon what is currently known about bacterial cytoplasm. It is unknown if the first prebiotic, microscopic scale, cytoplasm was initially contained within a primitive, continuous, semipermeable membrane, or was an uncontained gel substance, that later became enclosed by a continuous membrane. Another possibility is that the first cytoplasm in prebiotic cells and a primitive membrane organized at the same time, permitting a rapid transition to the first cell(s capable of growth and division, thus assisting with the emergence of life on Earth less than a billion years after the formation of the Earth. It is hypothesized that the organization and composition of cytoplasm progressed initially from an unstructured, microscopic hydrogel to a more complex cytoplasm, that may have been in the volume magnitude of about 0.1–0.2 µm3 (possibly less if a nanocell prior to the first cell division.

  16. USE OF GRANULAR GRAPHITE FOR ELECTROLYTIC DECHLORINATION OF TRICHLOROETHYLENE

    Science.gov (United States)

    Granular graphite is a potential electrode material for the electrochemical remediation of refractory chlorinated organic compounds such as trichloroethylene (TCE). However, the use of granular graphite can complicate the experimental results. On one hand, up to 99% of TCE was re...

  17. Xenopus egg cytoplasm with intact actin.

    Science.gov (United States)

    Field, Christine M; Nguyen, Phuong A; Ishihara, Keisuke; Groen, Aaron C; Mitchison, Timothy J

    2014-01-01

    We report optimized methods for preparing Xenopus egg extracts without cytochalasin D, that we term "actin-intact egg extract." These are undiluted egg cytoplasm that contains abundant organelles, and glycogen which supplies energy, and represents the least perturbed cell-free cytoplasm preparation we know of. We used this system to probe cell cycle regulation of actin and myosin-II dynamics (Field et al., 2011), and to reconstitute the large, interphase asters that organize early Xenopus embryos (Mitchison et al., 2012; Wühr, Tan, Parker, Detrich, & Mitchison, 2010). Actin-intact Xenopus egg extracts are useful for analysis of actin dynamics, and interaction of actin with other cytoplasmic systems, in a cell-free system that closely mimics egg physiology, and more generally for probing the biochemistry and biophysics of the egg, zygote, and early embryo. Detailed protocols are provided along with assays used to check cell cycle state and tips for handling and storing undiluted egg extracts. © 2014 Elsevier Inc. All rights reserved.

  18. 11th Traffic and Granular Flow Conference

    CERN Document Server

    Daamen, Winnie

    2016-01-01

    The Conference on Traffic and Granular Flow brings together international researchers from different fields ranging from physics to computer science and engineering to discuss the latest developments in traffic-related systems. Originally conceived to facilitate new ideas by considering the similarities of traffic and granular flow, TGF'15, organised by Delft University of Technology, now covers a broad range of topics related to driven particle and transport systems. Besides the classical topics of granular flow and highway traffic, its scope includes data transport (Internet traffic), pedestrian and evacuation dynamics, intercellular transport, swarm behaviour and the collective dynamics of other biological systems. Recent advances in modelling, computer simulation and phenomenology are presented, and prospects for applications, for example to traffic control, are discussed. The conference explores the interrelations between the above-mentioned fields and offers the opportunity to stimulate interdisciplinar...

  19. The Granular Blasius Problem: High inertial number granular flows

    Science.gov (United States)

    Tsang, Jonathan; Dalziel, Stuart; Vriend, Nathalie

    2017-11-01

    The classical Blasius problem considers the formation of a boundary layer through the change at x = 0 from a free-slip to a no-slip boundary beneath an otherwise steady uniform flow. Discrete particle model (DPM) simulations of granular gravity currents show that a similar phenomenon exists for a steady flow over a uniformly sloped surface that is smooth upstream (allowing slip) but rough downstream (imposing a no-slip condition). The boundary layer is a region of high shear rate and therefore high inertial number I; its dynamics are governed by the asymptotic behaviour of the granular rheology as I -> ∞ . The μ(I) rheology asserts that dμ / dI = O(1 /I2) as I -> ∞ , but current experimental evidence is insufficient to confirm this. We show that `generalised μ(I) rheologies', with different behaviours as I -> ∞ , all permit the formation of a boundary layer. We give approximate solutions for the velocity profile under each rheology. The change in boundary condition considered here mimics more complex topography in which shear stress increases in the streamwise direction (e.g. a curved slope). Such a system would be of interest in avalanche modelling. EPSRC studentship (Tsang) and Royal Society Dorothy Hodgkin Fellowship (Vriend).

  20. Granular cell tumor: An uncommon benign neoplasm

    Directory of Open Access Journals (Sweden)

    Tirthankar Gayen

    2015-01-01

    Full Text Available Granular cell tumor is a distinctly rare neoplasm of neural sheath origin. It mainly presents as a solitary asymptomatic swelling in the oral cavity, skin, and rarely internal organs in the middle age. Histopathology is characteristic, showing polyhedral cells containing numerous fine eosinophilic granules with indistinct cell margins. We present a case of granular cell tumor on the back of a 48-year-old woman which was painful, mimicking an adnexal tumor.

  1. Dynamics of crater formations in immersed granular materials

    Science.gov (United States)

    Varas, G.; Vidal, V.; Géminard, J.

    2009-12-01

    Craters are part of the widespread phenomena observed in nature. Among the main applications to natural phenomena, aside from meteorite impact craters, are the formation and growth of volcanic edifices, by successive ejecta emplacement and/or erosion. The time evolution and dynamics play a crucial role here, as the competition between volcanic-jet mass-flux (degassing and ejecta) and crater-size evolution may control directly the eruptive regime. Crater morphology in dry granular material has been extensively studied, both experimentally and theoretically. Most of these studies investigate the final, steady crater shape resulting from the collision of solid bodies with the material surface and scaling laws are derived. In immersed granular material, craters generated by an underwater vortex ring, or underwater impact craters generated by landslide, have been reported. In a previous experimental study, Gostiaux et al. [Gran. Matt., 2002] have investigated the dynamics of air flowing through an immersed granular layer. They reported that, depending on the flow rate, the system exhibits two qualitatively different regimes: At small flow rate, the bubbling regime during which bubbles escape the granular layer independently one from another; At large flow rate, the open-channel regime which corresponds to the formation of a channel crossing the whole thickness of the granular bed through which air escapes almost continuously. At intermediate flow rate, a spontaneous alternation between these two regimes is observed. Here, we report the dynamics of crater formations at the free surface of an immersed granular bed, locally crossed by an ascending gas flow. We reproduce the experimental conditions of Gostiaux et al. (2002) in two dimensions: In a vertical Hele-Shaw cell, the crater consists of two sand piles which develop around the location of the gas emission. We observe that the typical size of the crater increases logarithmically with time, independently of the gas

  2. Gene expression and localization of two types of AQP5 in Xenopus tropicalis under hydration and dehydration.

    Science.gov (United States)

    Shibata, Yuki; Sano, Takahiro; Tsuchiya, Nobuhito; Okada, Reiko; Mochida, Hiroshi; Tanaka, Shigeyasu; Suzuki, Masakazu

    2014-07-01

    Two types of aquaporin 5 (AQP5) genes (aqp-xt5a and aqp-xt5b) were identified in the genome of Xenopus tropicalis by synteny comparison and molecular phylogenetic analysis. When the frogs were in water, AQP-xt5a mRNA was expressed in the skin and urinary bladder. The expression of AQP-xt5a mRNA was significantly increased in dehydrated frogs. AQP-xt5b mRNA was also detected in the skin and increased in response to dehydration. Additionally, AQP-xt5b mRNA began to be slightly expressed in the lung and stomach after dehydration. For the pelvic skin of hydrated frogs, immunofluorescence staining localized AQP-xt5a and AQP-xt5b to the cytoplasm of secretory cells of the granular glands and the apical plasma membrane of secretory cells of the small granular glands, respectively. After dehydration, the locations of both AQPs in their respective glands did not change, but AQP-xt5a was visualized in the cytoplasm of secretory cells of the small granular glands. For the urinary bladder, AQP-xt5a was observed in the apical plasma membrane and cytoplasm of a number of granular cells under normal hydration. After dehydration, AQP-xt5a was found in the apical membrane and cytoplasm of most granular cells. Injection of vasotocin into hydrated frogs did not induce these changes in the localization of AQP-xt5a in the small granular glands and urinary bladder, however. The results suggest that AQP-xt5a might be involved in water reabsorption from the urinary bladder during dehydration, whereas AQP-xt5b might play a role in water secretion from the small granular gland. Copyright © 2014 the American Physiological Society.

  3. Density-Driven segregation in Binary and Ternary Granular Systems

    NARCIS (Netherlands)

    Windows-Yule, Kit; Parker, David

    2015-01-01

    We present a first experimental study of density-induced segregation within a three-dimensional, vibrofluidised, ternary granular system. Using Positron Emission Particle Tracking (PEPT), we study the steady-state particle distributions achieved by binary and ternary granular beds under a variety of

  4. Massive granular cell ameloblastoma with dural extension and atypical morphology

    Directory of Open Access Journals (Sweden)

    Vandana Raghunath

    2014-01-01

    Full Text Available Ameloblastomas are rare histologically benign, locally aggressive tumors arising from the oral ectoderm that occasionally reach a gigantic size. Giant ameloblastomas are a rarity these days with the advent of panoramic radiography in routine dental practice. Furthermore, the granular cell variant is an uncommon histological subtype of ameloblastoma where the central stellate reticulum like cells in tumor follicles is replaced by granular cells. Although granular cell ameloblastoma (GCA is considered to be a destructive tumor with a high recurrence rate, the significance of granular cells in predicting its biologic behavior is debatable. However, we present a rare case of giant GCA of remarkable histomorphology showing extensive craniofacial involvement and dural extension that rendered a good prognosis following treatment.

  5. Chaos emerging in soil failure patterns observed during tillage: Normalized deterministic nonlinear prediction (NDNP) and its application.

    Science.gov (United States)

    Sakai, Kenshi; Upadhyaya, Shrinivasa K; Andrade-Sanchez, Pedro; Sviridova, Nina V

    2017-03-01

    Real-world processes are often combinations of deterministic and stochastic processes. Soil failure observed during farm tillage is one example of this phenomenon. In this paper, we investigated the nonlinear features of soil failure patterns in a farm tillage process. We demonstrate emerging determinism in soil failure patterns from stochastic processes under specific soil conditions. We normalized the deterministic nonlinear prediction considering autocorrelation and propose it as a robust way of extracting a nonlinear dynamical system from noise contaminated motion. Soil is a typical granular material. The results obtained here are expected to be applicable to granular materials in general. From a global scale to nano scale, the granular material is featured in seismology, geotechnology, soil mechanics, and particle technology. The results and discussions presented here are applicable in these wide research areas. The proposed method and our findings are useful with respect to the application of nonlinear dynamics to investigate complex motions generated from granular materials.

  6. Tunneling magnetoresistance in granular cermet films with particle size distribution

    International Nuclear Information System (INIS)

    Vovk, A.Ya.; Golub, V.O.; Malkinski, L.; Kravets, A.F.; Pogorily, A.M.; Shypil', O.V.

    2004-01-01

    The correlation between tunneling magnetoresistance (TMR) and field sensitivity (dMR/dH) for granular films (Co 50 Fe 50 ) x -(Al 2 O 3 ) 1-x was studied. The position of TMR maximum is shifted towards the lower x in the higher applied magnetic fields. Such a behavior was observed for metal granular nanocomposites but is first reported for granular cermets. However the highest dMR/dH was found for the compositions just below the percolation threshold

  7. Influence of granular strontium chloride as additives on some ...

    Indian Academy of Sciences (India)

    Influence of granular strontium chloride as additives on some electrical and mechanical properties for pure polyvinyl alcohol. A B Elaydy M Hafez ... Keywords. Polyvinyl-alcohol (PVA); granular strontium chloride, SrCl2; a.c. electrical conductivity; dielectric constant; dielectric loss; Young's modulus; creep relaxation curve.

  8. Cytoplasmic Domains and Voltage-Dependent Potassium Channel Gating

    Science.gov (United States)

    Barros, Francisco; Domínguez, Pedro; de la Peña, Pilar

    2012-01-01

    The basic architecture of the voltage-dependent K+ channels (Kv channels) corresponds to a transmembrane protein core in which the permeation pore, the voltage-sensing components and the gating machinery (cytoplasmic facing gate and sensor–gate coupler) reside. Usually, large protein tails are attached to this core, hanging toward the inside of the cell. These cytoplasmic regions are essential for normal channel function and, due to their accessibility to the cytoplasmic environment, constitute obvious targets for cell-physiological control of channel behavior. Here we review the present knowledge about the molecular organization of these intracellular channel regions and their role in both setting and controlling Kv voltage-dependent gating properties. This includes the influence that they exert on Kv rapid/N-type inactivation and on activation/deactivation gating of Shaker-like and eag-type Kv channels. Some illustrative examples about the relevance of these cytoplasmic domains determining the possibilities for modulation of Kv channel gating by cellular components are also considered. PMID:22470342

  9. Cytoplasmic ATR Activation Promotes Vaccinia Virus Genome Replication

    Directory of Open Access Journals (Sweden)

    Antonio Postigo

    2017-05-01

    Full Text Available In contrast to most DNA viruses, poxviruses replicate their genomes in the cytoplasm without host involvement. We find that vaccinia virus induces cytoplasmic activation of ATR early during infection, before genome uncoating, which is unexpected because ATR plays a fundamental nuclear role in maintaining host genome integrity. ATR, RPA, INTS7, and Chk1 are recruited to cytoplasmic DNA viral factories, suggesting canonical ATR pathway activation. Consistent with this, pharmacological and RNAi-mediated inhibition of canonical ATR signaling suppresses genome replication. RPA and the sliding clamp PCNA interact with the viral polymerase E9 and are required for DNA replication. Moreover, the ATR activator TOPBP1 promotes genome replication and associates with the viral replisome component H5. Our study suggests that, in contrast to long-held beliefs, vaccinia recruits conserved components of the eukaryote DNA replication and repair machinery to amplify its genome in the host cytoplasm.

  10. Stabilization and Degradation Mechanisms of Cytoplasmic Ataxin-1

    Directory of Open Access Journals (Sweden)

    Mayumi F. Kohiyama

    2015-01-01

    Full Text Available Aggregation-prone proteins in neurodegenerative disease disrupt cellular protein stabilization and degradation pathways. The neurodegenerative disease spinocerebellar ataxia type 1 (SCA1 is caused by a coding polyglutamine expansion in the Ataxin-1 gene ( ATXN1 , which gives rise to the aggregation-prone mutant form of ATXN1 protein. Cerebellar Purkinje neurons, preferentially vulnerable in SCA1, produce ATXN1 protein in both cytoplasmic and nuclear compartments. Cytoplasmic stabilization of ATXN1 by phosphorylation and 14-3-3-mediated mechanisms ultimately drive translocation of the protein to the nucleus where aggregation may occur. However, experimental inhibition of phosphorylation and 14-3-3 binding results in rapid degradation of ATXN1, thus preventing nuclear translocation and cellular toxicity. The exact mechanism of cytoplasmic ATXN1 degradation is currently unknown; further investigation of degradation may provide future therapeutic targets. This review examines the present understanding of cytoplasmic ATXN1 stabilization and potential degradation mechanisms during normal and pathogenic states.

  11. Real-time magnetic resonance imaging of highly dynamic granular phenomena

    Science.gov (United States)

    Penn, Alexander; Pruessmann, Klaas P.; Müller, Christoph

    Probing non-intrusively the interior of three-dimensional granular systems is a challenging task for which a number of imaging techniques have been applied including positron emission particle tracking, X-ray tomography and magnetic resonance imaging (MRI). A particular advantage of MRI is its versatility allowing quantitative velocimetry through phase contrast encoding and tagging, arbitrary slice orientations and the flexibility to trade spatial for temporal resolution and vice versa during image reconstruction. However, previous attempts to image granular systems using MRI were often limited to (pseudo-) steady state systems due to the poor temporal resolution of conventional imaging methodology. Here we present an experimental approach that overcomes previous limitations in temporal resolution by implementing a variety of methodological advances, viz. parallel data acquisition through tailored multiple receiver coils, fast gradient readouts for time-efficient data sampling and engineered granular materials that contain signal sources of high proton density. Achieving a spatial and temporal resolution of, respectively, 2 mm x 2 mm and 50 ms, we were able to image highly dynamic phenomena in granular media such as bubble coalescence and granular compaction waves.

  12. Wet granular matter a truly complex fluid

    CERN Document Server

    Herminghaus, Stephan

    2013-01-01

    This is a monograph written for the young and advanced researcher who is entering the field of wet granular matter and keen to understand the basic physical principles governing this state of soft matter. It treats wet granulates as an instance of a ternary system, consisting of the grains, a primary, and a secondary fluid. After addressing wetting phenomena in general and outlining the basic facts on dry granular systems, a chapter on basic mechanisms and their effects is dedicated to every region of the ternary phase diagram. Effects of grain shape and roughness are considered as well. Rather than addressing engineering aspects such as existing books on this topic do, the book aims to provide a generalized framework suitable for those who want to understand these systems on a more fundamental basis. Readership: For the young and advanced researcher entering the field of wet granular matter.

  13. The behaviour of free-flowing granular intruders

    Directory of Open Access Journals (Sweden)

    Wyburn Edward

    2017-01-01

    Full Text Available Particle shape affects both the quasi-static and dynamic behaviour of granular media. There has been significant research devoted to the flowability of systems of irregularly shaped particles, as well as the flow of grains around fixed intruders, however the behaviour of free flowing intruders within granular flows remains comparatively unexplored. Here, the effect of the shape of these intruder particles is studied, looking at the kinematic behaviour of the intruders and in particular their tendency of orientation. Experiments are carried out within the Stadium Shear Device, which is a novel apparatus able to continuously apply simple shear conditions to two-dimensional grain analogues. It is found that the intruder shows different behaviour to that of the bulk flow, and that this behaviour is strongly shape dependent. These insights could lead to the development of admixtures that alter the flowability of granular materials.

  14. Origin of the resistivity minima in granular superconductors

    International Nuclear Information System (INIS)

    Simanek, E.

    1982-01-01

    The recently observed minima in the temperature dependence of the electrical resistivity of a granular superconductor are explained with use of a percolation model of a disordered granular array, which takes into account the electrostatic charging energy. The thermally activated tunneling of Cooper pairs is shown to play an important role in the interpretation of the experimental data on tin films

  15. System size effects on the mechanical response of cohesive-frictional granular ensembles

    Directory of Open Access Journals (Sweden)

    Singh Saurabh

    2017-01-01

    Full Text Available Shear resistance in granular ensembles is a result of interparticle interaction and friction. However, even the presence of small amounts of cohesion between the particles changes the landscape of the mechanical response considerably. Very often such cohesive frictional (c-ϕ granular ensembles are encountered in nature as well as while handling and storage of granular materials in the pharmaceutical, construction and mining industries. Modeling of these c-ϕ materials, especially in engineering applications have relied on the oft-made assumption of a “continua” and have utilized the popular tenets of continuum plasticity theory. We present an experimental investigation on the fundamental mechanics of c-ϕ materials specifically; we investigate if there exists a system size effect and any additional length scales beyond the continuum length scale on their mechanical response. For this purpose, we conduct a series of 1-D compression (UC tests on cylindrical specimens reconstituted in the laboratory with a range of model particle–binder combinations such as sandcement, sand-epoxy, and glass ballotini-epoxy mixtures. Specimens are reconstituted to various diameters ranging from 10 mm to 150 mm (with an aspect ratio of 2 to a predefined packing fraction. In addition to the effect of the type of binder (cement, epoxy and system size, the mean particle size is also varied from 0.5 to 2.5 mm. The peak strength of these materials is significant as it signals the initiation of the cohesive-bond breaking and onset of mobilization of the inter particle frictional resistance. For these model systems, the peak strength is a strong function of the system size of the ensemble as well as the mean particle size. This intriguing observation is counter to the traditional notion of a continuum plastic typical granular ensemble. Microstructure studies in a computed-tomograph have revealed the existence of a web patterned ‘entangled-chain’ like structure

  16. System size effects on the mechanical response of cohesive-frictional granular ensembles

    Science.gov (United States)

    Singh, Saurabh; Kandasami, Ramesh Kannan; Mahendran, Rupesh Kumar; Murthy, Tejas

    2017-06-01

    Shear resistance in granular ensembles is a result of interparticle interaction and friction. However, even the presence of small amounts of cohesion between the particles changes the landscape of the mechanical response considerably. Very often such cohesive frictional (c-ϕ) granular ensembles are encountered in nature as well as while handling and storage of granular materials in the pharmaceutical, construction and mining industries. Modeling of these c-ϕ materials, especially in engineering applications have relied on the oft-made assumption of a "continua" and have utilized the popular tenets of continuum plasticity theory. We present an experimental investigation on the fundamental mechanics of c-ϕ materials specifically; we investigate if there exists a system size effect and any additional length scales beyond the continuum length scale on their mechanical response. For this purpose, we conduct a series of 1-D compression (UC) tests on cylindrical specimens reconstituted in the laboratory with a range of model particle-binder combinations such as sandcement, sand-epoxy, and glass ballotini-epoxy mixtures. Specimens are reconstituted to various diameters ranging from 10 mm to 150 mm (with an aspect ratio of 2) to a predefined packing fraction. In addition to the effect of the type of binder (cement, epoxy) and system size, the mean particle size is also varied from 0.5 to 2.5 mm. The peak strength of these materials is significant as it signals the initiation of the cohesive-bond breaking and onset of mobilization of the inter particle frictional resistance. For these model systems, the peak strength is a strong function of the system size of the ensemble as well as the mean particle size. This intriguing observation is counter to the traditional notion of a continuum plastic typical granular ensemble. Microstructure studies in a computed-tomograph have revealed the existence of a web patterned `entangled-chain' like structure, we argue that this ushers

  17. Hierarchical modular granular neural networks with fuzzy aggregation

    CERN Document Server

    Sanchez, Daniela

    2016-01-01

    In this book, a new method for hybrid intelligent systems is proposed. The proposed method is based on a granular computing approach applied in two levels. The techniques used and combined in the proposed method are modular neural networks (MNNs) with a Granular Computing (GrC) approach, thus resulting in a new concept of MNNs; modular granular neural networks (MGNNs). In addition fuzzy logic (FL) and hierarchical genetic algorithms (HGAs) are techniques used in this research work to improve results. These techniques are chosen because in other works have demonstrated to be a good option, and in the case of MNNs and HGAs, these techniques allow to improve the results obtained than with their conventional versions; respectively artificial neural networks and genetic algorithms.

  18. Surface effects in the acetylation of granular potato starch

    NARCIS (Netherlands)

    Steeneken, P.A.M.; Woortman, A.J.J.

    2008-01-01

    The occurrence of surface effects in the acetylation of granular potato starch with acetic anhydride to degrees of substitution 0.04-0.2 was studied by two different approaches. The first approach involved the fractionation of granular starch acetates into five different size classes and analysis of

  19. Tuning strain of granular matter by basal assisted Couette shear

    Directory of Open Access Journals (Sweden)

    Zhao Yiqiu

    2017-01-01

    Full Text Available We present a novel Couette shear apparatus capable of generating programmable azimuthal strain inside 2D granular matter under Couette shear. The apparatus consists of 21 independently movable concentric rings and two boundary wheels with frictional racks. This makes it possible to quasistatically shear the granular matter not only from the boundaries but also from the bottom. We show that, by specifying the collective motion of wheels and rings, the apparatus successfully generates the desired strain profile inside the sample granular system, which is composed of about 2000 photoelastic disks. The motion and stress of each particle is captured by an imaging system utilizing reflective photoelasticimetry. This apparatus provides a novel method to investigate shear jamming properties of granular matter with different interior strain profiles and unlimited strain amplitudes.

  20. Stable solutions of a scalar conservation law for particle-size segregation in dense granular avalanches

    OpenAIRE

    Shearer, M.; Gray, J. M N T; Thornton, A. R.

    2008-01-01

    Dense, dry granular avalanches are very efficient at sorting the larger particles towards the free surface of the flow, and finer grains towards the base, through the combined processes of kinetic sieving and squeeze expulsion. This generates an inversely graded particle-size distribution, which is fundamental to a variety of pattern formation mechanisms, as well as subtle size-mobility feedback effects, leading to the formation of coarse-grained lateral levees that create channels in geophys...

  1. Emotional Granularity Effects on Event-Related Brain Potentials during Affective Picture Processing.

    Science.gov (United States)

    Lee, Ja Y; Lindquist, Kristen A; Nam, Chang S

    2017-01-01

    There is debate about whether emotional granularity , the tendency to label emotions in a nuanced and specific manner, is merely a product of labeling abilities, or a systematic difference in the experience of emotion during emotionally evocative events. According to the Conceptual Act Theory of Emotion (CAT) (Barrett, 2006), emotional granularity is due to the latter and is a product of on-going temporal differences in how individuals categorize and thus make meaning of their affective states. To address this question, the present study investigated the effects of individual differences in emotional granularity on electroencephalography-based brain activity during the experience of emotion in response to affective images. Event-related potentials (ERP) and event-related desynchronization and synchronization (ERD/ERS) analysis techniques were used. We found that ERP responses during the very early (60-90 ms), middle (270-300 ms), and later (540-570 ms) moments of stimulus presentation were associated with individuals' level of granularity. We also observed that highly granular individuals, compared to lowly granular individuals, exhibited relatively stable desynchronization of alpha power (8-12 Hz) and synchronization of gamma power (30-50 Hz) during the 3 s of stimulus presentation. Overall, our results suggest that emotional granularity is related to differences in neural processing throughout emotional experiences and that high granularity could be associated with access to executive control resources and a more habitual processing of affective stimuli, or a kind of "emotional complexity." Implications for models of emotion are also discussed.

  2. Small solar system bodies as granular systems

    Science.gov (United States)

    Hestroffer, Daniel; Campo Bagatín, Adriano; Losert, Wolfgang; Opsomer, Eric; Sánchez, Paul; Scheeres, Daniel J.; Staron, Lydie; Taberlet, Nicolas; Yano, Hajime; Eggl, Siegfried; Lecomte, Charles-Edouard; Murdoch, Naomi; Radjai, Fahrang; Richardson, Derek C.; Salazar, Marcos; Schwartz, Stephen R.; Tanga, Paolo

    2017-06-01

    Asteroids and other Small Solar System Bodies (SSSBs) are currently of great scientific and even industrial interest. Asteroids exist as the permanent record of the formation of the Solar System and therefore hold many clues to its understanding as a whole, as well as insights into the formation of planetary bodies. Additionally, SSSBs are being investigated in the context of impact risks for the Earth, space situational awareness and their possible industrial exploitation (asteroid mining). In all these aspects, the knowledge of the geophysical characteristics of SSSB surface and internal structure are of great importance. Given their size, constitution, and the evidence that many SSSBs are not simple monoliths, these bodies should be studied and modelled as self-gravitating granular systems in general, or as granular systems in micro-gravity environments in particular contexts. As such, the study of the geophysical characteristics of SSSBs is a multi-disciplinary effort that lies at the crossroads between Granular Mechanics, Celestial Mechanics, Soil Mechanics, Aerospace Engineering and Computer Sciences.

  3. Thermal diffusion segregation of an impurity in a driven granular fluid

    Energy Technology Data Exchange (ETDEWEB)

    Reyes, Francisco Vega; Garzó, Vicente [Departamento de Física, Universidad de Extremadura, E-06071 Badajoz, Spain and Instituto de Computación Científica Avanzada (ICCAEx), Universidad de Extremadura, E-06071 Badajoz (Spain)

    2014-12-09

    We study segregation of an impurity in a driven granular fluid under two types of steady states. In the first state, the granular gas is driven by a stochastic volume force field with a Fourier-type profile while in the second state, the granular gas is sheared in such a way that inelastic cooling is balanced by viscous heating. We compare theoretical results derived from a solution of the (inelastic) Boltzmann equation at Navier-Stokes (NS) order with those obtained from the Direct Monte Carlo simulation (DSMC) method and molecular dynamics (MD) simulations. Good agreement is found between theory and simulation, which provides strong evidence of the reliability of NS granular hydrodynamics for these steady states (including the dynamics of the impurity), even at high inelasticity. In addition, preliminary results for thermal diffusion in granular fluids at moderate densities are also presented. As for dilute gases, excellent agreement is also found in this more general case.

  4. Some effects of gas-induced fluidization in dry granular media

    Energy Technology Data Exchange (ETDEWEB)

    Nermoen, Anders

    2010-06-15

    The main body of this thesis consists of three papers in which aspects of fluid induced deformation in granular materials are studied. Insight from experiments, dimensional analysis, numerical modeling and analytic predictions are combined to interpret observations various aspects of piercement structures in the geological record. A fourth paper is included showing how analogue modeling has been used to understand a geological processes. Paper 1 presents experimental work on the segregation pattern forming in partially fluidized, bi-modal sized granular mixtures. The experiments are performed on a vertically oriented Hele-Shaw cell (HS-cell), the narrow box between two parallel glass plates, filled with glass beads. Gas flow is imparted through the bottom of the bed causing fluidization when the system is driven at velocities exceeding a critical limit. The co-existence of fluidized and static zones is termed partial fluidization and occurs when the imposed gas flux is insufficient to fluidize the whole system. Within the fluidized zones, the particles re-organize and the large particles sediment down while the small particles remains fluidized. The re-organization is caused by differences in the ratio of the weight to the viscous drag. A pipe-like pattern develops due to a feedback mechanism in which the flow is focused through domains dominated by large particles. The focusing of the flow localizes the fluidization, which in turn enables the sedimentation of the large grains. Paper 2 presents an experimental and analytical study of the critical conditions for fluidization of a dry granular material. Based on the experiments, we find that the critical velocity of fluidization scales almost linear with the ratio of the filling height to the inlet width. An analytic model for the pressure field is obtained by solving the Laplace equation for the velocity boundary conditions given by the geometry of the experimental setup. By integrating the vertical component of the

  5. Electrical transport properties in Fe-Cr nanocluster-assembled granular films

    Science.gov (United States)

    Wang, Xiong-Zhi; Wang, Lai-Sen; Zhang, Qin-Fu; Liu, Xiang; Xie, Jia; Su, A.-Mei; Zheng, Hong-Fei; Peng, Dong-Liang

    2017-09-01

    The Fe100-xCrx nanocluster-assembled granular films with Cr atomic fraction (x) ranging from 0 to 100 were fabricated by using a plasma-gas-condensation cluster deposition system. The TEM characterization revealed that the uniform Fe clusters were coated with a Cr layer to form a Fe-Cr core-shell structure. Then, the as-prepared Fe100-xCrx nanoclusters were randomly assembled into a granular film in vacuum environments with increasing the deposition time. Because of the competition between interfacial resistance and shunting effect of Cr layer, the room temperature resistivity of the Fe100-xCrx nanocluster-assembled granular films first increased and then decreased with increasing the Cr atomic fraction (x), and revealed a maximum of 2 × 104 μΩ cm at x = 26 at.%. The temperature-dependent longitudinal resistivity (ρxx), magnetoresistance (MR) effect and anomalous Hall effect (AHE) of these Fe100-xCrx nanocluster-assembled granular films were also studied systematically. As the x increased from 0 to 100, the ρxx of all samples firstly decreased and then increased with increasing the measuring temperature. The dependence of ρxx on temperature could be well addressed by a mechanism incorporated for the fluctuation-induced-tunneling (FIT) conduction process and temperature-dependent scattering effect. It was found that the anomalous Hall effect (AHE) had no legible scaling relation in Fe100-xCrx nanocluster-assembled granular films. However, after deducting the contribution of tunneling effect, the scaling relation was unambiguous. Additionally, the Fe100-xCrx nanocluster-assembled granular films revealed a small negative magnetoresistance (MR), which decreased with the increase of x. The detailed physical mechanism of the electrical transport properties in these Fe100-xCrx nanocluster-assembled granular films was also studied.

  6. First cytoplasmic loop of glucagon-like peptide-1 receptor can function at the third cytoplasmic loop position of rhodopsin.

    Science.gov (United States)

    Yamashita, Takahiro; Tose, Koji; Shichida, Yoshinori

    2008-01-01

    G protein-coupled receptors (GPCRs) are classified into several families based on their amino acid sequences. In family 1, GPCRs such as rhodopsin and adrenergic receptor, the structure-function relationship has been extensively investigated to demonstrate that exposure of the third cytoplasmic loop is essential for selective G protein activation. In contrast, much less is known about other families. Here we prepared chimeric mutants between Gt-coupled rhodopsin and Gi/Go- and Gs-coupled glucagon-like peptide-1 (GLP-1) receptor of family 2 and tried to identify the loop region that functions at the third cytoplasmic loop position of rhodopsin. We succeeded in expressing a mutant having the first cytoplasmic loop of GLP-1 receptor and found that this mutant activated Gi and Go efficiently but did not activate Gt. Moreover, the rhodopsin mutant having the first loop of Gs-coupled secretin receptor of family 2 decreased the Gi and Go activation efficiencies. Therefore, the first loop of GLP-1 receptor would share a similar role to the third loop of rhodopsin in G protein activation. This result strongly suggested that different families of GPCRs have maintained molecular architectures of their ancestral types to generate a common mechanism, namely exposure of the cytoplasmic loop, to activate peripheral G protein.

  7. Endoplasmic-reticulum-mediated microtubule alignment governs cytoplasmic streaming.

    Science.gov (United States)

    Kimura, Kenji; Mamane, Alexandre; Sasaki, Tohru; Sato, Kohta; Takagi, Jun; Niwayama, Ritsuya; Hufnagel, Lars; Shimamoto, Yuta; Joanny, Jean-François; Uchida, Seiichi; Kimura, Akatsuki

    2017-04-01

    Cytoplasmic streaming refers to a collective movement of cytoplasm observed in many cell types. The mechanism of meiotic cytoplasmic streaming (MeiCS) in Caenorhabditis elegans zygotes is puzzling as the direction of the flow is not predefined by cell polarity and occasionally reverses. Here, we demonstrate that the endoplasmic reticulum (ER) network structure is required for the collective flow. Using a combination of RNAi, microscopy and image processing of C. elegans zygotes, we devise a theoretical model, which reproduces and predicts the emergence and reversal of the flow. We propose a positive-feedback mechanism, where a local flow generated along a microtubule is transmitted to neighbouring regions through the ER. This, in turn, aligns microtubules over a broader area to self-organize the collective flow. The proposed model could be applicable to various cytoplasmic streaming phenomena in the absence of predefined polarity. The increased mobility of cortical granules by MeiCS correlates with the efficient exocytosis of the granules to protect the zygotes from osmotic and mechanical stresses.

  8. Tracing Thermal Creep Through Granular Media

    Science.gov (United States)

    Steinpilz, Tobias; Teiser, Jens; Koester, Marc; Schywek, Mathias; Wurm, Gerhard

    2017-08-01

    A temperature gradient within a granular medium at low ambient pressure drives a gas flow through the medium by thermal creep. We measured the resulting air flow for a sample of glass beads with particle diameters between 290 μ m and 420 μ m for random close packing. Ambient pressure was varied between 1 Pa and 1000 Pa. The gas flow was quantified by means of tracer particles during parabolic flights. The flow varies systematically with pressure between 0.2 cm/s and 6 cm/s. The measured flow velocities are in quantitative agreement to model calculations that treat the granular medium as a collection of linear capillaries.

  9. A physical perspective on cytoplasmic streaming.

    Science.gov (United States)

    Goldstein, Raymond E; van de Meent, Jan-Willem

    2015-08-06

    Organisms show a remarkable range of sizes, yet the dimensions of a single cell rarely exceed 100 µm. While the physical and biological origins of this constraint remain poorly understood, exceptions to this rule give valuable insights. A well-known counterexample is the aquatic plant Chara, whose cells can exceed 10 cm in length and 1 mm in diameter. Two spiralling bands of molecular motors at the cell periphery drive the cellular fluid up and down at speeds up to 100 µm s(-1), motion that has been hypothesized to mitigate the slowness of metabolite transport on these scales and to aid in homeostasis. This is the most organized instance of a broad class of continuous motions known as 'cytoplasmic streaming', found in a wide range of eukaryotic organisms-algae, plants, amoebae, nematodes and flies-often in unusually large cells. In this overview of the physics of this phenomenon, we examine the interplay between streaming, transport and cell size and discuss the possible role of self-organization phenomena in establishing the observed patterns of streaming.

  10. Characteristics and performance of aerobic algae-bacteria granular consortia in a photo-sequencing batch reactor.

    Science.gov (United States)

    Liu, Lin; Zeng, Zhichao; Bee, Mingyang; Gibson, Valerie; Wei, Lili; Huang, Xu; Liu, Chaoxiang

    2018-05-05

    The characteristics and performance of algae-bacteria granular consortia which cultivated with aerobic granules and targeted algae (Chlorella and Scenedesmus), and the essential difference between granular consortia and aerobic granules were investigated in this experiment. The result indicated that algae-bacteria granular consortia could be successfully developed, and the algae present in the granular consortia were mainly Chlorella and Scenedesmus. Although the change of chlorophyll composition revealed the occurrence of light limitation for algal growth, the granular consortia could maintain stable granular structure, and even showed better settling property than aerobic granules. Total nitrogen and phosphate in the algal-bacterial granular system showed better removal efficiencies (50.2% and 35.7%) than those in the aerobic granular system (32.8% and 25.6%) within one cycle (6 h). The biodiesel yield of aerobic granules could be significantly improved by algal coupled process, yet methyl linolenate and methyl palmitoleate were the dominant composition of biodiesel obtained from granular consortia and aerobic granules, respectively. Meanwhile, the difference of dominant bacterial communities in the both granules was found at the order level and family level, and alpha diversity indexes revealed the granular consortia had a higher microbial diversity. Copyright © 2018. Published by Elsevier B.V.

  11. User-centric Query Refinement and Processing Using Granularity Based Strategies

    NARCIS (Netherlands)

    Zeng, Y.; Zhong, N.; Wang, Y.; Qin, Y.; Huang, Z.; Zhou, H; Yao, Y; van Harmelen, F.A.H.

    2011-01-01

    Under the context of large-scale scientific literatures, this paper provides a user-centric approach for refining and processing incomplete or vague query based on cognitive- and granularity-based strategies. From the viewpoints of user interests retention and granular information processing, we

  12. Cytoplasmic localization of alteration/deficiency in activation 3 (ADA3) predicts poor clinical outcome in breast cancer patients.

    Science.gov (United States)

    Mirza, Sameer; Rakha, Emad A; Alshareeda, Alaa; Mohibi, Shakur; Zhao, Xiangshan; Katafiasz, Bryan J; Wang, Jun; Gurumurthy, Channabasavaiah Basavaraju; Bele, Aditya; Ellis, Ian O; Green, Andrew R; Band, Hamid; Band, Vimla

    2013-02-01

    Transcriptional activation by estrogen receptor (ER) is a key step to breast oncogenesis. Given previous findings that ADA3 is a critical component of HAT complexes that regulate ER function and evidence that overexpression of other ER coactivators such as SRC-3 is associated with clinical outcomes in breast cancer, the current study was designed to assess the potential significance of ADA3 expression/localization in human breast cancer patients. In this study, we analyzed ADA3 expression in breast cancer tissue specimens and assessed the correlation of ADA3 staining with cancer progression and patient outcome. Tissue microarrays prepared from large series of breast cancer patients with long-term follow-ups were stained with anti-ADA3 monoclonal antibody using immunohistochemistry. Samples were analyzed for ADA3 expression followed by correlation with various clinicopathological parameters and patients' outcomes. We report that breast cancer specimens show predominant nuclear, cytoplasmic, or mixed nuclear + cytoplasmic ADA3 staining patterns. Predominant nuclear ADA3 staining correlated with ER+ status. While predominant cytoplasmic ADA3 staining negatively correlated with ER+ status, but positively correlated with ErbB2, EGFR, and Ki67. Furthermore, a positive correlation of cytoplasmic ADA3 was observed with higher histological grade, mitotic counts, Nottingham Prognostic Index, and positive vascular invasion. Patients with nuclear ADA3 and ER positivity have better breast cancer specific survival and distant metastasis free survival. Significantly, cytoplasmic expression of ADA3 showed a strong positive association with reduced BCSS and DMFS in ErbB2+/EGFR+ patients. Although in multivariate analyses ADA3 expression was not an independent marker of survival, predominant nuclear ADA3 staining in breast cancer tissues correlates with ER+ expression and together serves as a marker of good prognosis, whereas predominant cytoplasmic ADA3 expression correlates with

  13. Large mid-esophageal granular cell tumor: benign versus malignant

    Directory of Open Access Journals (Sweden)

    Prarthana Roselil Christopher

    2015-06-01

    Full Text Available Granular cell tumors are rare soft tissue neoplasms, among which only 2% are malignant, arising from nervous tissue. Here we present a case of a large esophageal granular cell tumor with benign histopathological features which metastasized to the liver, but showing on positron emission tomography-computerized tomography standardized uptake value suggestive of a benign lesion.

  14. Adsorption Study of Cobalt on Treated Granular Activated Carbon

    OpenAIRE

    Y. V. Hete; S. B. Gholase; R. U. Khope

    2012-01-01

    This study is carried out for the removal of cobalt from aqueous solution using granular activated carbon in combination with p-nitro benzoic acid at temperature 25±1 °C. The adsorption isotherm of cobalt on granular activated carbon has been determined and the data fitted reasonably well to the Langmuir and Freundlich isotherm for activated carbon.

  15. Swelling pressure and water absorption property of compacted granular bentonite during water absorption

    International Nuclear Information System (INIS)

    Oyamada, T.; Komine, H.; Murakami, S.; Sekiguchi, T.; Sekine, I.

    2012-01-01

    Document available in extended abstract form only. Bentonite is currently planned to be used as buffer materials in engineered barrier of radioactive waste disposal. Granular bentonites are expected as the materials used in constructions as buffer materials by in-situ compaction methods. After applying these buffer materials, it is expected that the condition of the buffer area changes in long-term by the seepage of groundwater into buffer area. Therefore, it is important to understand water movement and swelling behavior of the buffer materials for evaluating the performance of engineered barrier. In this study, we investigated water absorption property and swelling pressure of compacted granular bentonite. Specifically, the process of swelling pressure and amount of water absorption of granular bentonite-GX (Kunigel-GX, produced at the Tsukinuno mine in Japan) were observed by laboratory tests. To discuss the influence of maximum grain size of bentonite particle on swelling pressure and water absorption property, two types of samples were used. One is granular sample which is Bentonite-GX controlled under 2 mm the maximum grain size, the other is milled sample which is Bentonite-GX with the maximum grain size under 0.18 mm by milling with the agate mortar. In addition, the mechanism on the swelling pressure of compacted granular bentonite was considered and discussed. In the cases of granular sample, swelling pressure increases rapidly, then gradually continues to increase up to maximum value. In the cases of milled sample, swelling pressure also increases rapidly at first. However, then its value decreases before progressing of gradual increase continues. Especially, this trend was clearly observed at a relatively low dry density. At the peaks of these curves, the swelling pressure of granular samples is lower than that of milled samples. In addition, the increasing of swelling pressure by the time the peak observed during the process of swelling pressure from

  16. A novel nucleo-cytoplasmic hybrid clone formed via androgenesis in polyploid gibel carp

    Directory of Open Access Journals (Sweden)

    Zhou Li

    2011-03-01

    Full Text Available Abstract Background Unisexual vertebrates have been demonstrated to reproduce by gynogenesis, hybridogenesis, parthenogenesis, or kleptogenesis, however, it is uncertain how the reproduction mode contributes to the clonal diversity. Recently, polyploid gibel carp has been revealed to possess coexisting dual modes of unisexual gynogenesis and sexual reproduction and to have numerous various clones. Using sexual reproduction mating between clone D female and clone A male and subsequent 7 generation multiplying of unisexual gynogenesis, we have created a novel clone strain with more than several hundred millions of individuals. Here, we attempt to identify genetic background of the novel clone and to explore the significant implication for clonal diversity contribution. Methods Several nuclear genome markers and one cytoplasmic marker, the mitochondrial genome sequence, were used to identify the genetic organization of the randomly sampled individuals from different generations of the novel clone. Results Chromosome number, Cot-1 repetitive DNA banded karyotype, microsatellite patterns, AFLP profiles and transferrin alleles uniformly indicated that nuclear genome of the novel clone is identical to that of clone A, and significantly different from that of clone D. However, the cytoplasmic marker, its complete mtDNA genome sequence, is same to that of clone D, and different from that of clone A. Conclusions The present data indicate that the novel clone is a nucleo-cytoplasmic hybrid between the known clones A and D, because it originates from the offspring of gonochoristic sexual reproduction mating between clone D female and clone A male, and contains an entire nuclear genome from the paternal clone A and a mtDNA genome (cytoplasm from the maternal clone D. It is suggested to arise via androgenesis by a mechanism of ploidy doubling of clone A sperm in clone D ooplasm through inhibiting the first mitotic division. Significantly, the selected nucleo-cytoplasmic

  17. A novel nucleo-cytoplasmic hybrid clone formed via androgenesis in polyploid gibel carp

    Science.gov (United States)

    2011-01-01

    Background Unisexual vertebrates have been demonstrated to reproduce by gynogenesis, hybridogenesis, parthenogenesis, or kleptogenesis, however, it is uncertain how the reproduction mode contributes to the clonal diversity. Recently, polyploid gibel carp has been revealed to possess coexisting dual modes of unisexual gynogenesis and sexual reproduction and to have numerous various clones. Using sexual reproduction mating between clone D female and clone A male and subsequent 7 generation multiplying of unisexual gynogenesis, we have created a novel clone strain with more than several hundred millions of individuals. Here, we attempt to identify genetic background of the novel clone and to explore the significant implication for clonal diversity contribution. Methods Several nuclear genome markers and one cytoplasmic marker, the mitochondrial genome sequence, were used to identify the genetic organization of the randomly sampled individuals from different generations of the novel clone. Results Chromosome number, Cot-1 repetitive DNA banded karyotype, microsatellite patterns, AFLP profiles and transferrin alleles uniformly indicated that nuclear genome of the novel clone is identical to that of clone A, and significantly different from that of clone D. However, the cytoplasmic marker, its complete mtDNA genome sequence, is same to that of clone D, and different from that of clone A. Conclusions The present data indicate that the novel clone is a nucleo-cytoplasmic hybrid between the known clones A and D, because it originates from the offspring of gonochoristic sexual reproduction mating between clone D female and clone A male, and contains an entire nuclear genome from the paternal clone A and a mtDNA genome (cytoplasm) from the maternal clone D. It is suggested to arise via androgenesis by a mechanism of ploidy doubling of clone A sperm in clone D ooplasm through inhibiting the first mitotic division. Significantly, the selected nucleo-cytoplasmic hybrid female

  18. Editorial: Modelling and computational challenges in granular materials

    OpenAIRE

    Weinhart, Thomas; Thornton, Anthony Richard; Einav, Itai

    2015-01-01

    This is the editorial for the special issue on “Modelling and computational challenges in granular materials” in the journal on Computational Particle Mechanics (CPM). The issue aims to provide an opportunity for physicists, engineers, applied mathematicians and computational scientists to discuss the current progress and latest advancements in the field of advanced numerical methods and modelling of granular materials. The focus will be on computational methods, improved algorithms and the m...

  19. Pollen mitochondria in cytoplasmically male sterile tobacco zygotic and embryonic cells

    International Nuclear Information System (INIS)

    Symillides, Y.

    1985-09-01

    An attempt is being made to establish cytoplasmic organelles transmission during the process of fertilization, by using tobacco grain pollen labelled with leucine 14 C and tritiated thymidine. Through autoradiography the fate of pollen germination and its entry into the embryo sac has been studied. A few days after fertilization, labelled cytoplasmic organelles - mainly mitochondria - were detected in the embryo sac. However, labelling was not observed in cytoplasmic organelles by using tritiated thymidine. For more conclusive results labelled DNA incorporated in cytoplasmic organelles have to be traced during the embryo and endosperm development

  20. Can one ``Hear'' the aggregation state of a granular system?

    Science.gov (United States)

    Kruelle, Christof A.; Sánchez, Almudena García

    2013-06-01

    If an ensemble of macroscopic particles is mechanically agitated the constant energy input is dissipated into the system by multiple inelastic collisions. As a result, the granular material can exhibit, depending on the magnitude of agitation, several physical states - like a gaseous phase for high energy input or a condensed state for low agitation. Here we introduce a new method for quantifying the acoustical response of the granular system. Our experimental system consists of a monodisperse packing of glass beads with a free upper surface, which is confined inside a cylindrical container. An electro-mechanical shaker exerts a sinusoidal vertical vibration at normalized accelerations well above the fluidization threshold for a monolayer of particles. By increasing the number of beads the granular gas suddenly collapses if a critical threshold is exceeded. The transition can be detected easily with a microphone connected to the soundcard of a PC. From the recorded audio track a FFT is calculated in real-time. Depending on either the number of particles at a fixed acceleration or the amount of energy input for a given number of particles, the resulting rattling noise exhibits a power spectrum with either the dominating (shaker) frequency plus higher harmonics for a granular crystal or a high-frequency broad-band noise for a granular gas, respectively. Our new method demonstrates that it is possible to quantify analytically the subjective audio impressions of a careful listener and thus to distinguish easily between different aggregation states of an excited granular system.

  1. Granular-front formation in free-surface flow of concentrated suspensions

    Science.gov (United States)

    Leonardi, Alessandro; Cabrera, Miguel; Wittel, Falk K.; Kaitna, Roland; Mendoza, Miller; Wu, Wei; Herrmann, Hans J.

    2015-11-01

    A granular front emerges whenever the free-surface flow of a concentrated suspension spontaneously alters its internal structure, exhibiting a higher concentration of particles close to its front. This is a common and yet unexplained phenomenon, which is usually believed to be the result of fluid convection in combination with particle size segregation. However, suspensions composed of uniformly sized particles also develop a granular front. Within a large rotating drum, a stationary recirculating avalanche is generated. The flowing material is a mixture of a viscoplastic fluid obtained from a kaolin-water dispersion with spherical ceramic particles denser than the fluid. The goal is to mimic the composition of many common granular-fluid materials, such as fresh concrete or debris flow. In these materials, granular and fluid phases have the natural tendency to separate due to particle settling. However, through the shearing caused by the rotation of the drum, a reorganization of the phases is induced, leading to the formation of a granular front. By tuning the particle concentration and the drum velocity, it is possible to control this phenomenon. The setting is reproduced in a numerical environment, where the fluid is solved by a lattice-Boltzmann method, and the particles are explicitly represented using the discrete element method. The simulations confirm the findings of the experiments, and provide insight into the internal mechanisms. Comparing the time scale of particle settling with the one of particle recirculation, a nondimensional number is defined, and is found to be effective in predicting the formation of a granular front.

  2. Nonlinear instability and convection in a vertically vibrated granular bed

    NARCIS (Netherlands)

    Shukla, P.; Ansari, I.H.; van der Meer, Roger M.; Lohse, Detlef; Alam, M.

    2014-01-01

    The nonlinear instability of the density-inverted granular Leidenfrost state and the resulting convective motion in strongly shaken granular matter are analysed via a weakly nonlinear analysis of the hydrodynamic equations. The base state is assumed to be quasi-steady and the effect of harmonic

  3. COMPORTAMIENTO RESILIENTE DE MATERIALES GRANULARES EN PAVIMENTOS FLEXIBLES: ESTADO DEL CONOCIMIENTO RESILIENT BEHAVIOR OF GRANULAR MATERIALS IN FLEXIBLE PAVEMENTS: STATE OF THE ART

    Directory of Open Access Journals (Sweden)

    Hugo Alexander Rondón Quintana

    2007-07-01

    Full Text Available Los vehículos que circulan sobre una estructura de pavimento inducen ciclos de carga y descarga que generan dentro de las capas granulares deformaciones recuperables (resilientes y permanentes (plásticas. La ingeniería de pavimentos ha venido desarrollando estudios desde la década de los 60 con el fin de intentar comprender el comportamiento elastoplástico que experimentan materiales granulares cuando conforman capas de base y subbase en estructuras flexibles. La mayor parte de las investigaciones que se han realizado en esta área se han concentrado en estudiar su comportamiento resiliente. El estado del conocimiento de estudios desarrollados para medir la respuesta resiliente y la deformación permanente en materiales granulares es presentado en dos artículos por separado. En este primer artículo se presenta la forma como ha sido estudiado el comportamiento resiliente de materiales granulares y se discuten los factores que influyen en dicho comportamiento. Al final del artículo se presenta la evolución de las ecuaciones matemáticas desarrolladas a partir de resultados de estudios teóricos y experimentales. Un estado del conocimiento sobre el fenómeno de deformación permanente es presentado en un segundo artículo.When vehicles move on a pavement structure, they induce load cycles that generate resilient and permanent strains inside granular layers. Since the 60's, pavement engineering has developed studies in order to understand the elasto-plastic behavior that granular materials experiment on base and sub-base layers of flexible pavements. Most of the researches that have been made in this area have concentrated in studying their resilient behavior. A state of the art about the behavior of granular materials in flexible pavements is presented in two separate papers. This first paper tries on resilient stress-strain characteristics of such materials. The mathematical equations found in the literature to predict the resilient

  4. Submammary Granular Parakeratosis Treated With Mastopexy.

    Science.gov (United States)

    Nelson, Garrett; Lien, Mary H; Messina, Jane L; Ranjit, Sonali; Fenske, Neil Alan

    2017-08-01

    Granular parakeratosis, originally named axillary granular parakeratosis, is an uncommon disease with an unclear etiology. It is thought to result from defective processing of profillagrin to fillagrin, causing retention of keratohyaline granules in the epidermis. A myriad of causative factors has been proposed, including friction, moisture, heat, and contact irritants such as deodorants. We present a case in the inframammary area that resolved with mastopexy, further supporting the role of friction, moisture, and heat. Furthermore, we present electron microscopic evidence demonstrating non-degraded keratohyaline granules upon epidermal maturation. This entity, we believe, is reactive and represents a protective response of the body to moisture and heat. J Drugs Dermatol. 2017;16(8):810-812..

  5. Tumor of granular cells of esophagus

    International Nuclear Information System (INIS)

    Gonzalez Fabian, Licet; Diaz Anaya, Amnia; Perez de la Torre, Georgina

    2010-01-01

    Granular cells tumors are rare and asymptomatic lesions and by general, it is an incidental finding en high or low endoscopy. They were described for the first time by Abrikossoff in 1926. The more frequent locations are the buccal mucosa, dermis and subcutaneous cellular tissue, most of these tumors has a benign origin. This is the case of a woman aged 44 with a pyrosis history from a year ago; by high endoscopy it is noted a 8 mm lesion distal to esophagus and confirmed by histological study of granular cells tumor. Elective treatment of this lesion is the endoscopic polypectomy. Despite that the malign potential is low; we suggested a close clinical and endoscopic follow-up.

  6. Traffic and Granular Flow ’07

    CERN Document Server

    Chevoir, François; Gondret, Philippe; Lassarre, Sylvain; Lebacque, Jean-Patrick; Schreckenberg, Michael

    2009-01-01

    This book covers several research fields, all of which deal with transport. Three main topics are treated: road traffic, granular matter, and biological transport. Different points of view, i.e. modelling, simulations, experiments, and phenomenological observations, are considered. Sub-topics include: highway or urban vehicular traffic (dynamics of traffic, macro/micro modelling, measurements, data analysis, security issues, psychological issues), pedestrian traffic, animal traffic (e.g. social insects), collective motion in biological systems (molecular motors...), granular flow (dense flows, intermittent flows, solid/liquid transition, jamming, force networks, fluid and solid friction), networks (biological networks, urban traffic, the internet, vulnerability of networks, optimal transport networks) and cellular automata applied to the various aforementioned fields.

  7. Navier-Stokes hydrodynamics of thermal collapse in a freely cooling granular gas.

    Science.gov (United States)

    Kolvin, Itamar; Livne, Eli; Meerson, Baruch

    2010-08-01

    We show that, in dimension higher than one, heat diffusion and viscosity cannot arrest thermal collapse in a freely evolving dilute granular gas, even in the absence of gravity. Thermal collapse involves a finite-time blowup of the gas density. It was predicted earlier in ideal, Euler hydrodynamics of dilute granular gases in the absence of gravity, and in nonideal, Navier-Stokes granular hydrodynamics in the presence of gravity. We determine, analytically and numerically, the dynamic scaling laws that characterize the gas flow close to collapse. We also investigate bifurcations of a freely evolving dilute granular gas in circular and wedge-shaped containers. Our results imply that, in general, thermal collapse can only be arrested when the gas density becomes comparable with the close-packing density of grains. This provides a natural explanation to the formation of densely packed clusters of particles in a variety of initially dilute granular flows.

  8. Bubbling in vibrated granular films.

    Science.gov (United States)

    Zamankhan, Piroz

    2011-02-01

    With the help of experiments, computer simulations, and a theoretical investigation, a general model is developed of the flow dynamics of dense granular media immersed in air in an intermediate regime where both collisional and frictional interactions may affect the flow behavior. The model is tested using the example of a system in which bubbles and solid structures are produced in granular films shaken vertically. Both experiments and large-scale, three-dimensional simulations of this system are performed. The experimental results are compared with the results of the simulation to verify the validity of the model. The data indicate evidence of formation of bubbles when peak acceleration relative to gravity exceeds a critical value Γ(b). The air-grain interfaces of bubblelike structures are found to exhibit fractal structure with dimension D=1.7±0.05.

  9. Visually defining and querying consistent multi-granular clinical temporal abstractions.

    Science.gov (United States)

    Combi, Carlo; Oliboni, Barbara

    2012-02-01

    The main goal of this work is to propose a framework for the visual specification and query of consistent multi-granular clinical temporal abstractions. We focus on the issue of querying patient clinical information by visually defining and composing temporal abstractions, i.e., high level patterns derived from several time-stamped raw data. In particular, we focus on the visual specification of consistent temporal abstractions with different granularities and on the visual composition of different temporal abstractions for querying clinical databases. Temporal abstractions on clinical data provide a concise and high-level description of temporal raw data, and a suitable way to support decision making. Granularities define partitions on the time line and allow one to represent time and, thus, temporal clinical information at different levels of detail, according to the requirements coming from the represented clinical domain. The visual representation of temporal information has been considered since several years in clinical domains. Proposed visualization techniques must be easy and quick to understand, and could benefit from visual metaphors that do not lead to ambiguous interpretations. Recently, physical metaphors such as strips, springs, weights, and wires have been proposed and evaluated on clinical users for the specification of temporal clinical abstractions. Visual approaches to boolean queries have been considered in the last years and confirmed that the visual support to the specification of complex boolean queries is both an important and difficult research topic. We propose and describe a visual language for the definition of temporal abstractions based on a set of intuitive metaphors (striped wall, plastered wall, brick wall), allowing the clinician to use different granularities. A new algorithm, underlying the visual language, allows the physician to specify only consistent abstractions, i.e., abstractions not containing contradictory conditions on

  10. Failure evolution in granular material retained by rigid wall in active mode

    Science.gov (United States)

    Pietrzak, Magdalena; Leśniewska, Danuta

    2012-10-01

    This paper presents a detailed study of a selected small scale model test, performed on a sample of surrogate granular material, retained by a rigid wall (typical geotechnical problem of earth thrust on a retaining wall). The experimental data presented in this paper show that the deformation of granular sample behind retaining wall can undergo some cyclic changes. The nature of these cycles is not clear - it is probably related to some micromechanical features of granular materials, which are recently extensively studied in many research centers in the world. Employing very precise DIC (PIV) method can help to relate micro and macro-scale behavior of granular materials.

  11. Marker-assisted identification of restorer gene(s) in iso-cytoplasmic restorer lines of WA cytoplasm in rice and assessment of their fertility restoration potential across environments.

    Science.gov (United States)

    Kumar, Amit; Bhowmick, Prolay Kumar; Singh, Vikram Jeet; Malik, Manoj; Gupta, Ashish Kumar; Seth, R; Nagarajan, M; Krishnan, S Gopala; Singh, Ashok Kumar

    2017-10-01

    Iso-cytoplasmic restorers possess the same male sterile cytoplasm as the cytoplasmic male sterile (CMS) lines, thereby minimizing the potential cyto-nuclear conflict in the hybrids. Restoration of fertility of the wild abortive CMS is governed by two major genes namely, Rf3 and Rf4 . Therefore, assessing the allelic status of these restorer genes in the iso-cytoplasmic restorers using molecular markers will not only help in estimating the efficiency of these genes either alone or in combination, in fertility restoration in the hybrids in different environments, but will also be useful in determining the efficacy of these markers. In the present study, the efficiency of molecular markers in identifying genotypes carrying restorer allele of the gene(s) Rf3 and Rf4, restoring male fertility of WA cytoplasm in rice was assessed in a set of 100 iso-cytoplasmic rice restorers using gene linked as well as candidate gene based markers. In order to validate the efficacy of markers in identifying the restorers, a sub-set of selected 25 iso-cytoplasmic rice restorers were crossed with four different cytoplasmic male sterile lines namely, IR 79156A, IR 58025A, Pusa 6A and RTN 12A, and the pollen and spikelet fertility of the F 1 s were evaluated at three different locations. Marker analysis showed that Rf4 was the predominant fertility restorer gene in the iso-cytoplasmic restorers and Rf3 had a synergistic effect on fertility restoration. The efficiency of gene based markers, DRCG-RF4-14 and DRRM-RF3-10 for Rf4 (87%) and Rf3 (84%) genes was higher than respective gene-linked SSR markers RM6100 (80%) and RM3873 (82%). It is concluded that the gene based markers can be effectively used in identifying fertility restorer lines obviating the need for making crosses and evaluating the F 1 s. Though gene based markers are more efficient, there is a need to identify functional polymorphisms which can provide 100% efficiency. Three iso-cytoplasmic restorers namely, PRR 300, PRR 363

  12. Granular Leidenfrost effect: Experiment and theory of floating particle clusters

    NARCIS (Netherlands)

    Eshuis, Peter; Eshuis, P.G.; van der Meer, Roger M.; van der Weele, J.P.; Lohse, Detlef

    2005-01-01

    Granular material is vertically vibrated in a 2D container: above a critical shaking strength, and for a sufficient number of beads, a crystalline cluster is elevated and supported by a dilute gaseous layer of fast beads underneath. We call this phenomenon the granular Leidenfrost effect. The

  13. Adsorption Study of Cobalt on Treated Granular Activated Carbon

    Directory of Open Access Journals (Sweden)

    Y. V. Hete

    2012-01-01

    Full Text Available This study is carried out for the removal of cobalt from aqueous solution using granular activated carbon in combination with p-nitro benzoic acid at temperature 25±1 °C. The adsorption isotherm of cobalt on granular activated carbon has been determined and the data fitted reasonably well to the Langmuir and Freundlich isotherm for activated carbon.

  14. Granular computing in decision approximation an application of rough mereology

    CERN Document Server

    Polkowski, Lech

    2015-01-01

    This book presents a study in knowledge discovery in data with knowledge understood as a set of relations among objects and their properties. Relations in this case are implicative decision rules and the paradigm in which they are induced is that of computing with granules defined by rough inclusions, the latter introduced and studied  within rough mereology, the fuzzified version of mereology. In this book basic classes of rough inclusions are defined and based on them methods for inducing granular structures from data are highlighted. The resulting granular structures are subjected to classifying algorithms, notably k—nearest  neighbors and bayesian classifiers. Experimental results are given in detail both in tabular and visualized form for fourteen data sets from UCI data repository. A striking feature of granular classifiers obtained by this approach is that preserving the accuracy of them on original data, they reduce  substantially the size of the granulated data set as well as the set of granular...

  15. Disinfection of bacteria attached to granular activated carbon.

    Science.gov (United States)

    LeChevallier, M W; Hassenauer, T S; Camper, A K; McFeters, G A

    1984-01-01

    Heterotrophic plate count bacteria, coliform organisms, and pathogenic microorganisms attached to granular activated carbon particles were examined for their susceptibility to chlorine disinfection. When these bacteria were grown on carbon particles and then disinfected with 2.0 mg of chlorine per liter (1.4 to 1.6 mg of free chlorine residual per liter after 1 h) for 1 h, no significant decrease in viable counts was observed. Washed cells attached to the surface of granular activated carbon particles showed similar resistance to chlorine, but a progressive increase in sublethal injury was found. Observations made by scanning electron microscope indicated that granular activated carbon was colonized by bacteria which grow in cracks and crevices and are coated by an extracellular slime layer. These data suggest a possible mechanism by which treatment and disinfection barriers can be penetrated and pathogenic bacteria may enter drinking water supplies. Images PMID:6508306

  16. Acquisition and Retaining Granular Samples via a Rotating Coring Bit

    Science.gov (United States)

    Bar-Cohen, Yoseph; Badescu, Mircea; Sherrit, Stewart

    2013-01-01

    frictional force must be greater than the weight of the sample. The bit can be designed with an internal sleeve to serve as a container for granular samples. This tube-shaped component can be extracted upon completion of the sampling, and the bottom can be capped by placing the bit onto a corklike component. Then, upon removal of the internal tube, the top section can be sealed. The novel features of this device are: center dot A mechanism of acquiring and retaining granular samples using a coring bit without a closed door. center dot An acquisition bit that has internal structure such as a waffle pattern for compartmentalizing or helical internal flute to propel the sample inside the bit and help in acquiring and retaining granular samples. center dot A bit with an internal spiral into which the various particles wedge. center dot A design that provides a method of testing frictional properties of the granular samples and potentially segregating particles based on size and density. A controlled acceleration or deceleration may be used to drop the least-frictional particles or to eventually shear the unconsolidated material near the bit center.

  17. Induction of cytoplasmic male sterility by gamma-ray and chemical mutagens in sugar beets

    Energy Technology Data Exchange (ETDEWEB)

    Kinoshita, Toshiro [Hokkaido Univ., Sapporo (Japan). Faculty of Agriculture

    1982-03-01

    Male sterile plants appeared in the population of N cytoplasm sugar beet strains, H-19 and H-2002, when their dry seeds were exposed to 50 kR gamma-ray, and the male sterility was maintained up to the M/sub 4/ generation through the mother plants. Cytoplasmic inheritance was confirmed by the reciprocal crossings between plants with normal phenotype from gamma-strains (progeneis of the male mutants which transmitted male sterility through the mother plants) and H-19 or H-1001. The crossing experiments suggested that various kinds of cytoplasm were induced by gamma-ray irradiation, and that different nuclear genes were responsible for the respective cytoplasms. A specific relationship between the pollen restoring genes and the sterile cytoplasms was established, and was named ''one set of pollen restoring genes for one cytoplasm''. It is probable that the cytoplasmic mutation occurred in normal cytoplasm strains and the specific combination between the altered cytoplasm and the recessive nuclear gene produced male sterility. Ethyl methane sulphonate, ethidium bromide, acriflavine and streptomycin were also effective in inducing cytoplasmic mutation in sugar beets.

  18. Induction of cytoplasmic male sterility by gamma-ray and chemical mutagens in sugar beets

    International Nuclear Information System (INIS)

    Kinoshita, Toshiro

    1982-01-01

    Male sterile plants appeared in the population of N cytoplasm sugar beet strains, H-19 and H-2002, when their dry seeds were exposed to 50 kR gamma-ray, and the male sterility was maintained up to the M 4 generation through the mother plants. Cytoplasmic inheritance was confirmed by the reciprocal crossings between plants with normal phenotype from gamma-strains (progeneis of the male mutants which transmitted male sterility through the mother plants) and H-19 or H-1001. The crossing experiments suggested that various kinds of cytoplasm were induced by gamma-ray irradiation, and that different nuclear genes were responsible for the respective cytoplasms. A specific relationship between the pollen restoring genes and the sterile cytoplasms was established, and was named ''one set of pollen restoring genes for one cytoplasm''. It is probable that the cytoplasmic mutation occurred in normal cytoplasm strains and the specific combination between the altered cytoplasm and the recessive nuclear gene produced male sterility. Ethyl methane sulphonate, ethidium bromide, acriflavine and streptomycin were also effective in inducing cytoplasmic mutation in sugar beets. (Kaihara, S.)

  19. Cytoplasmic Flow Enhances Organelle Dispersion in Eukaryotic Cells

    Science.gov (United States)

    Koslover, Elena; Mogre, Saurabh; Chan, Caleb; Theriot, Julie

    The cytoplasm of a living cell is an active environment through which intracellular components move and mix. We explore, using theoretical modeling coupled with microrheological measurements, the efficiency of particle dispersion via different modes of transport within this active environment. In particular, we focus on the role of cytoplasmic flow over different scales in contributing to organelle transport within two different cell types. In motile neutrophil cells, we show that bulk fluid flow associated with rapid cell deformation enhances particle transport to and from the cell periphery. In narrow fungal hyphae, localized flows due to hydrodynamic entrainment are shown to contribute to optimally efficient organelle dispersion. Our results highlight the importance of non-traditional modes of transport associated with flow of the cytoplasmic fluid in the distribution of organelles throughout eukaryotic cells.

  20. Granular contact dynamics using mathematical programming methods

    DEFF Research Database (Denmark)

    Krabbenhoft, K.; Lyamin, A. V.; Huang, J.

    2012-01-01

    granular contact dynamics formulation uses an implicit time discretization, thus allowing for large time steps. Moreover, in the limit of an infinite time step, the general dynamic formulation reduces to a static formulation that is useful in simulating common quasi-static problems such as triaxial tests...... is developed and it is concluded that the associated sliding rule, in the context of granular contact dynamics, may be viewed as an artifact of the time discretization and that the use of an associated flow rule at the particle scale level generally is physically acceptable. (C) 2012 Elsevier Ltd. All rights...

  1. International Workshop on Traffic and Granular Flow

    CERN Document Server

    Herrmann, Hans; Schreckenberg, Michael; Wolf, Dietrich; Social, Traffic and Granular Dynamics

    2000-01-01

    "Are there common phenomena and laws in the dynamic behavior of granular materials, traffic, and socio-economic systems?" The answers given at the international workshop "Traffic and Granular Flow '99" are presented in this volume. From a physical standpoint, all these systems can be treated as (self)-driven many-particle systems with strong fluctuations, showing multistability, phase transitions, non-linear waves, etc. The great interest in these systems is due to several unexpected new discoveries and their practical relevance for solving some fundamental problems of today's societies. This includes intelligent measures for traffic flow optimization and methods from "econophysics" for stabilizing (stock) markets.

  2. Granular cells Tumor in the gastrointestinal tract

    International Nuclear Information System (INIS)

    Castano LL, Rodrigo; Gaitan B, Maria H; Juliao E, Fabian

    2005-01-01

    Granular cells tumors are ubiquitous lesions in the gastrointestinal tract, are rare and asymptomatic and they are generally an incidental discovery at gastroduodenoscopy or colonoscopy. In the gastrointestinal tract they are more frequently located in the esophagus, right colon and rectum, stomach, appendix, small intestine or biliopancreatic tract. This article describes three patients with four tumors of granular cells in rectum, esophagus (2 lesions) and appendix. It becomes special emphasis in their neural origin, their benign behavior that justifies the endoscopic resections or limited surgical excisions and the necessity of a pursuit for the possibility, although little, of malignant transformation

  3. Rheological Behavior of Dense Assemblies of Granular Materials

    International Nuclear Information System (INIS)

    Sundaresan, Sankaran; Tardos, Gabriel I.; Subramaniam, Shankar

    2011-01-01

    Assemblies of granular materials behave differently when they are owing rapidly, from when they are slowly deforming. The behavior of rapidly owing granular materials, where the particle-particle interactions occur largely through binary collisions, is commonly related to the properties of the constituent particles through the kinetic theory of granular materials. The same cannot be said for slowly moving or static assemblies of granular materials, where enduring contacts between particles are prevalent. For instance, a continuum description of the yield characteristics of dense assemblies of particles in the quasistatic ow regime cannot be written explicitly on the basis of particle properties, even for cohesionless particles. Continuum models for this regime have been proposed and applied, but these models typically assume that the assembly is at incipient yield and they are expressed in terms of the yield function, which we do not yet know how to express in terms of particle-level properties. The description of the continuum rheology in the intermediate regime is even less understood. Yet, many practically important flows in nature and in a wide range of technological applications occur in the dense flow regime and at the transition between dilute and dense regimes; the lack of validated continuum rheological models for particle assemblies in these regimes limits predictive modeling of such flows. This research project is aimed at developing such rheological models.

  4. Advanced Granular System Modeling, Phase I

    Data.gov (United States)

    National Aeronautics and Space Administration — Spaceports of the future will utilize new granular materials in unique applications including insulation for cryogenic tanks and Lunar regolith processing for usable...

  5. Erosion of a wet/dry granular interface

    Science.gov (United States)

    Jop, Pierre; Lefebvre, Gautier

    2013-04-01

    To model the dynamic of landslides, the evolution of the interface between the erodible ground and the flowing material is still studied experimentally or numerically (ie. Mangeney et al. 2010, Iverson 2012). In some cases, the basal material is more cohesive than the flowing one. Such situation arises for example due to cementation or humidity. What are the exchange rates between these phases? What is the coupling between the evolution of the interface and the flow? We studied the erosion phenomenon and performed laboratory experiments to focus on the interaction between a cohesive unsaturated granular material and a dry granular flow. Both materials were spherical grains, the cohesion being induced by adding a given mass of liquid to the grains. Two configurations were explored: a circular aggregate submitted to a dry flow in a rotating drum, and a granular flow eroding a wet granular pile. First, we focused on the influence of the cohesion, controlled by the liquid properties, such as the surface tension and the viscosity. Then the flow characteristics were modified by varying the grain size and density. These results allowed us to present a model for the erosion mechanisms, based on the flow and fluid properties. The main results are the need to take into account the whole probability distribution the stress applied on the wet grains and that both the surface tension and the viscosity are important since they play a different roles. The latter is mainly responsible of the time scale of the dynamic of a wet grain, while the former acts as a threshold on the force distribution. In the second configuration, we could also control the inclination of the slope. This system supported the previous model and moreover revealed an interface instability, leading the formation of steep steps, which is a reminiscence of the cyclic-steps observed during river-channel incision (Parker and Izumi 2000). We will present the dynamics of such granular steps. [1] Mangeney, A., O

  6. Consequences of cytoplasmic irradiation. Studies from microbeam

    International Nuclear Information System (INIS)

    Zhou, Hongning; Hong, Mei; Chai, Yunfei; Hei, Tom K.

    2009-01-01

    The prevailing dogma for radiation biology is that genotoxic effects of ionizing radiation such as mutations and carcinogenesis are attributed mainly to direct damage to the nucleus. However, with the development of microbeam that can target precise positions inside the cells, accumulating evidences have shown that energy deposit by radiation in nuclear DNA is not required to trigger the damage, extra-nuclear or extra-cellular radiation could induce the similar biological effects as well. This review will summarize the biological responses after cytoplasm irradiated by microbeam, and the possible mechanisms involved in cytoplasmic irradiation. (author)

  7. Boundary effects in a quasi-two-dimensional driven granular fluid.

    Science.gov (United States)

    Smith, N D; Smith, M I

    2017-12-01

    The effect of a confining boundary on the spatial variations in granular temperature of a driven quasi-two-dimensional layer of particles is investigated experimentally. The radial drop in the relative granular temperature ΔT/T exhibits a maximum at intermediate particle numbers which coincides with a crossover from kinetic to collisional transport of energy. It is also found that at low particle numbers, the distributions of radial velocities are increasingly asymmetric as one approaches the boundary. The radial and tangential granular temperatures split, and in the tails of the radial velocity distribution there is a higher population of fast moving particles traveling away rather than towards the boundary.

  8. TRIM5α association with cytoplasmic bodies is not required for antiretroviral activity

    International Nuclear Information System (INIS)

    Song, Byeongwoon; Diaz-Griffero, Felipe; Park, Do Hyun; Rogers, Thomas; Stremlau, Matthew; Sodroski, Joseph

    2005-01-01

    The tripartite motif (TRIM) protein, TRIM5α, restricts infection by particular retroviruses. Many TRIM proteins form cytoplasmic bodies of unknown function. We investigated the relationship between cytoplasmic body formation and the structure and antiretroviral activity of TRIM5α. In addition to diffuse cytoplasmic staining, the TRIM5α proteins from several primate species were located in cytoplasmic bodies of different sizes; by contrast, TRIM5α from spider monkeys did not form cytoplasmic bodies. Despite these differences, all of the TRIM5α proteins exhibited the ability to restrict infection by particular retroviruses. Treatment of cells with geldanamycin, an Hsp90 inhibitor, resulted in disappearance or reduction of the TRIM5α-associated cytoplasmic bodies, yet exerted little effect on the restriction of retroviral infection. Studies of green fluorescent protein-TRIM5α fusion proteins indicated that no TRIM5α domain is specifically required for association with cytoplasmic bodies. Apparently, the formation of cytoplasmic bodies is not required for the antiretroviral activity of TRIM5α

  9. Impact induced splash and spill in a quasi-confided granular medium

    Science.gov (United States)

    Ogale, S. B.

    2005-03-01

    Dissipation of the energy of impact in a granular medium and its effects has been a subject of considerable scientific for quite some time. In this work we have explored and analyzed the splash and spill effects caused by the impact of a ball dropped from a height into a granular medium in a open container. Three different granular media, namely rice, mustard seeds, and cream of wheat were used. The amount of spilled-over granular matter was measured as a function of the ball-drop height. Digital pictures of the splash process were also recorded. The quantity of spilled granular matter varies linearly with the impact energy. However additional step like structures are also noted. Specifically, a distinct and large jump is seen in the spilled quantity at a specific impact energy in the case of mustard seeds, which also exhibit obvious charging effects and repulsion. Although the parameters such as mass per grain and packing density for the case of mustard seeds are intermediate between those for rice and cream of wheat, the spill quantity for comparable impact energy is considerably higher. These data will be presented and discussed.

  10. On creating macroscopically identical granular systems with different numbers of particles

    Science.gov (United States)

    van der Meer, Devaraj; Rivas, Nicolas

    2015-11-01

    One of the fundamental differences between granular and molecular hydrodynamics is the enormous difference in the total number of constituents. The small number of particles implies that the role of fluctuations in granular dynamics is of paramount importance. To obtain more insight in these fluctuations, we investigate to what extent it is possible to create identical granular hydrodynamic states with different number of particles. A definition is given of macroscopically equivalent systems, and the dependency of the conservation equations on the particle size is studied. We show that, in certain cases, and by appropriately scaling the microscopic variables, we are able to compare systems with significantly different number of particles that present the same macroscopic phenomenology. We apply these scalings in simulations of a vertically vibrated system, namely the density inverted granular Leidenfrost state and its transition to a buoyancy-driven convective state.

  11. Effect of Wetting and Contamination of Granular Beds During Sphere Impact

    KAUST Repository

    Kouraytem, Nadia

    2013-03-01

    This thesis presents results from an experimental study of the impact of dense solid spheres onto granular beds. The overall aim is to further our understanding of the dynamical response of granular materials to impact. In order to do this, we will study both the initial penetration stages and peak acceleration exerted on the sphere by using high-speed imaging. Another critical part is to measure the penetration depth of the sphere and calculate the corresponding depth-averaged stopping force. Both of these main focal points will be assessed for not only dry, but wet and “contaminated” grains, whereby the granular bed will be comprised of two distinct size ranges of base grains. In doing so, we aim to broadly determine whether contaminated grains or wet grains are more effective at increasing the tensile strength of granular materials.

  12. Experimental and analytical investigations of granular materials: Shear flow and convective heat transfer

    Science.gov (United States)

    Ahn, Hojin

    1989-12-01

    Granular materials flowing down an inclined chute were studied experimentally and analytically. Characteristics of convective heat transfer to granular flows were also investigated experimentally and numerically. Experiments on continuous, steady flows of granular materials in an inclined chute were conducted with the objectives of understanding the characteristics of chute flows and of acquiring information on the rheological behavior of granular material flow. Existing constitutive equations and governing equations were used to solve for fully developed chute flows of granular materials, and thus the boundary value problem was formulated with two parameters (the coefficient of restitution between particles, and the chute inclination) and three boundary values at the chute base wall (the values of solid fraction, granular temperature, and mean velocity at the wall). The boundary value problem was numerically solved by the shooting method. These analytical results were also compared with the present experimental values and with the computer simulations by other investigators in their literature. Experiments on heat transfer to granular flows over a flat heating plate were conducted with three sizes of glass beads, polystyrene beads, and mustard seeds. A modification on the existing model for the convective heat transfer was made using the effective Nusselt number and the effective Peclet number, which include the effects of solid fraction variations. The slightly modified model could describe the heat transfer characteristics of both fast and slow flows (supercritical and subcritical). A numerical analysis of the transfer to granular flows was also performed. The results were compared with the present experimental data, and reasonable agreement was found in the comparison.

  13. An automata model of granular materials

    International Nuclear Information System (INIS)

    Gutt, G.M.; Haff, P.K.

    1990-01-01

    In this paper a new modeling technique (the Lattice Grain Model) is presented for the simulation of two-dimensional granular systems involving large numbers of grains. These granular systems may include both high shear rate regions as well as static plugs of grains and cannot easily be handled within the framework of existing continuum theories such as soil mechanics. The Lattice Grain Model (LGrM) is similar to the Lattice Gas Model (LBM). This allows large simulations to be programmed onto a hypercube concurrent processor in a straightforward manner. However, it differs from LBM in that it includes the inelastic collisions and volume-filling properties of macroscopic grains. Examples to be presented will include Couette flow, flow through an hourglass, and gravity-driven flows around obstacles

  14. Slow creep in soft granular packings.

    Science.gov (United States)

    Srivastava, Ishan; Fisher, Timothy S

    2017-05-14

    Transient creep mechanisms in soft granular packings are studied numerically using a constant pressure and constant stress simulation method. Rapid compression followed by slow dilation is predicted on the basis of a logarithmic creep phenomenon. Characteristic scales of creep strain and time exhibit a power-law dependence on jamming pressure, and they diverge at the jamming point. Microscopic analysis indicates the existence of a correlation between rheology and nonaffine fluctuations. Localized regions of large strain appear during creep and grow in magnitude and size at short times. At long times, the spatial structure of highly correlated local deformation becomes time-invariant. Finally, a microscale connection between local rheology and local fluctuations is demonstrated in the form of a linear scaling between granular fluidity and nonaffine velocity.

  15. Effect of Wetting and Contamination of Granular Beds During Sphere Impact

    KAUST Repository

    Kouraytem, Nadia

    2013-01-01

    This thesis presents results from an experimental study of the impact of dense solid spheres onto granular beds. The overall aim is to further our understanding of the dynamical response of granular materials to impact. In order to do this, we

  16. Actin polymerisation at the cytoplasmic face of eukaryotic nuclei

    Directory of Open Access Journals (Sweden)

    David-Watine Brigitte

    2006-05-01

    Full Text Available Abstract Background There exists abundant molecular and ultra-structural evidence to suggest that cytoplasmic actin can physically interact with the nuclear envelope (NE membrane system. However, this interaction has yet to be characterised in living interphase cells. Results Using a fluorescent conjugate of the actin binding drug cytochalasin D (CD-BODIPY we provide evidence that polymerising actin accumulates in vicinity to the NE. In addition, both transiently expressed fluorescent actin and cytoplasmic micro-injection of fluorescent actin resulted in accumulation of actin at the NE-membrane. Consistent with the idea that the cytoplasmic phase of NE-membranes can support this novel pool of perinuclear actin polymerisation we show that isolated, intact, differentiated primary hepatocyte nuclei support actin polymerisation in vitro. Further this phenomenon was inhibited by treatments hindering steric access to outer-nuclear-membrane proteins (e.g. wheat germ agglutinin, anti-nesprin and anti-nucleoporin antibodies. Conclusion We conclude that actin polymerisation occurs around interphase nuclei of living cells at the cytoplasmic phase of NE-membranes.

  17. Density profiles of granular gases studied by molecular dynamics and Brownian bridges

    Science.gov (United States)

    Peñuñuri, F.; Montoya, J. A.; Carvente, O.

    2018-02-01

    Despite the inherent frictional forces and dissipative collisions, confined granular matter can be regarded as a system in a stationary state if we inject energy continuously. Under these conditions, both the density and the granular temperature are, in general, non-monotonic variables along the height of the container. In consequence, an analytical description of a granular system is hard to conceive. Here, by using molecular dynamics simulations, we measure the packing fraction profiles for a vertically vibrating three-dimensional granular system in several gaseous-like stationary states. We show that by using the Brownian bridge concept, the determined packing fraction profiles can be reproduced accurately and give a complete description of the distribution of the particles inside the simulation box.

  18. Propulsion via flexible flapping in granular media

    Science.gov (United States)

    Peng, Zhiwei; Ding, Yang; Pietrzyk, Kyle; Elfring, Gwynn; Pak, On Shun

    2017-11-01

    Biological locomotion in nature is often achieved by the interaction between a flexible body and its surrounding medium. The interaction of a flexible body with granular media is less understood compared with viscous fluids partially due to its complex rheological properties. In this work, we explore the effect of flexibility on granular propulsion by considering a simple mechanical model in which a rigid rod is connected to a torsional spring that is under a displacement actuation using a granular resistive force theory. Through a combined numerical and asymptotic investigation, we characterize the propulsive dynamics of such a flexible flapper in relation to the actuation amplitude and spring stiffness, and we compare these dynamics with those observed in a viscous fluid. In addition, we demonstrate that the maximum possible propulsive force can be obtained in the steady propulsion limit with a finite spring stiffness and large actuation amplitude. These results may apply to the development of synthetic locomotive systems that exploit flexibility to move through complex terrestrial media. Funding for Z.P. and Y.D. was partially provided by NSFC 394 Grant No. 11672029 and NSAF-NSFC Grant No. U1530401.

  19. Rough – Granular Computing knowledge discovery models

    Directory of Open Access Journals (Sweden)

    Mohammed M. Eissa

    2016-11-01

    Full Text Available Medical domain has become one of the most important areas of research in order to richness huge amounts of medical information about the symptoms of diseases and how to distinguish between them to diagnose it correctly. Knowledge discovery models play vital role in refinement and mining of medical indicators to help medical experts to settle treatment decisions. This paper introduces four hybrid Rough – Granular Computing knowledge discovery models based on Rough Sets Theory, Artificial Neural Networks, Genetic Algorithm and Rough Mereology Theory. A comparative analysis of various knowledge discovery models that use different knowledge discovery techniques for data pre-processing, reduction, and data mining supports medical experts to extract the main medical indicators, to reduce the misdiagnosis rates and to improve decision-making for medical diagnosis and treatment. The proposed models utilized two medical datasets: Coronary Heart Disease dataset and Hepatitis C Virus dataset. The main purpose of this paper was to explore and evaluate the proposed models based on Granular Computing methodology for knowledge extraction according to different evaluation criteria for classification of medical datasets. Another purpose is to make enhancement in the frame of KDD processes for supervised learning using Granular Computing methodology.

  20. Central Granular Cell Odontogenic Tumor: Report of a Case with CBCT Features.

    Directory of Open Access Journals (Sweden)

    Najmeh Anbiaee

    2014-06-01

    Full Text Available Central granular cell odontogenic tumor CGCOT of the jaw is an exceedingly rare benign odontogenic neoplasm with 35 reported cases in the literature. Among these, very few studies have focused on the cone-beam CT features of CGCOT. Here, we report a case of an asymptomatic CGCOT in a 16-year-old girl and focus on the cone-beam CT features. Only 36 cases of this lesion, including this one, have been reported so far. The case presented is of special importance due to the young age of the patient, the posterior location of the lesion and the multilocular pattern in the cone beam CT images.

  1. Flowability of granular materials with industrial applications - An experimental approach

    Science.gov (United States)

    Torres-Serra, Joel; Romero, Enrique; Rodríguez-Ferran, Antonio; Caba, Joan; Arderiu, Xavier; Padullés, Josep-Manel; González, Juanjo

    2017-06-01

    Designing bulk material handling equipment requires a thorough understanding of the mechanical behaviour of powders and grains. Experimental characterization of granular materials is introduced focusing on flowability. A new prototype is presented which performs granular column collapse tests. The device consists of a channel whose design accounts for test inspection using visualization techniques and load measurements. A reservoir is attached where packing state of the granular material can be adjusted before run-off to simulate actual handling conditions by fluidisation and deaeration of the pile. Bulk materials on the market, with a wide range of particle sizes, can be tested with the prototype and the results used for classification in terms of flowability to improve industrial equipment selection processes.

  2. Identification and characterization of vp7 gene in Bombyx mori cytoplasmic polyhedrosis virus.

    Science.gov (United States)

    He, Lei; Hu, Xiaolong; Zhu, Min; Liang, Zi; Chen, Fei; Zhu, Liyuan; Kuang, Sulan; Cao, Guangli; Xue, Renyu; Gong, Chengliang

    2017-09-05

    The genome of Bombyx mori cytoplasmic polyhedrosis virus (BmCPV) contains 10 double stranded RNA segments (S1-S10). The segment 7 (S7) encodes 50kDa protein which is considered as a structural protein. The expression pattern and function of p50 in the virus life cycle are still unclear. In this study, the viral structural protein 7 (VP7) polyclonal antibody was prepared with immunized mouse to explore the presence of small VP7 gene-encoded proteins in Bombyx mori cytoplasmic polyhedrosis virus. The expression pattern of vp7 gene was investigated by its overexpression in BmN cells. In addition to VP7, supplementary band was identified with western blotting technique. The virion, BmCPV infected cells and midguts were also examined using western blotting technique. 4, 2 and 5 bands were detected in the corresponding samples, respectively. The replication of BmCPV genome in the cultured cells and midgut of silkworm was decreased by reducing the expression level of vp7 gene using RNA interference. In immunoprecipitation experiments, using a polyclonal antiserum directed against the VP7, one additional shorter band in BmCPV infected midguts was detected, and then the band was analyzed with mass spectrum (MS), the MS results showed thatone candidate interacted protein (VP7 voltage-dependent anion-selective channel-like isoform, VDAC) was identified from silkworm. We concluded that the novel viral product was generated with a leaky scanning mechanism and the VDAC may be an interacted protein with VP7. Copyright © 2017 Elsevier B.V. All rights reserved.

  3. Characterization, Modeling and Application of Aerobic Granular Sludge for Wastewater Treatment

    Science.gov (United States)

    Liu, Xian-Wei; Yu, Han-Qing; Ni, Bing-Jie; Sheng, Guo-Ping

    Recently extensive studies have been carried out to cultivate aerobic granular sludge worldwide, including in China. Aerobic granules, compared with conventional activated sludge flocs, are well known for their regular, dense, and strong microbial structure, good settling ability, high biomass retention, and great ability to withstand shock loadings. Studies have shown that the aerobic granules could be applied for the treatment of low- or high-strength wastewaters, simultaneous removal of organic carbon, nitrogen and phosphorus, and decomposition of toxic wastewaters. Thus, this new form of activate sludge, like anaerobic granular sludge, could be employed for the treatment of municipal and industrial wastewaters in near future. This chapter attempts to provide an up-to-date review on the definition, cultivation, characterization, modeling and application of aerobic granular sludge for biological wastewater treatment. This review outlines some important discoveries with regard to the factors affecting the formation of aerobic granular sludge, their physicochemical characteristics, as well as their microbial structure and diversity. It also summarizes the modeling of aerobic granule formation. Finally, this chapter highlights the applications of aerobic granulation technology in the biological wastewater treatment. It is concluded that the knowledge regarding aerobic granular sludge is far from complete. Although previous studies in this field have undoubtedly improved our understanding on aerobic granular sludge, it is clear that much remains to be learned about the process and that many unanswered questions still remain. One of the challenges appears to be the integration of the existing and growing scientific knowledge base with the observations and applications in practice, which this paper hopes to partially achieve.

  4. Superconductivity effects near metal-insulator transition in granular idnium films

    International Nuclear Information System (INIS)

    Belevtsev, B.I.; Komnik, Yu.F.; Fomin, A.V.

    1986-01-01

    The influence of granules superconductivity on the electric properties of granular indium films is investigated under the conditions of partial or full granular localization of electrons. At temperatures below 5 K a minimum of electric resistance and negative magnetoresistance are revealed which are attributed to the competition of hopping conductivity and Josephson intergranular tunneling of electrons

  5. Acoustic waves in granular materials

    NARCIS (Netherlands)

    Mouraille, O.J.P.; Luding, Stefan

    2008-01-01

    Dynamic simulations with discrete elements are used to obtain more insight into the wave propagation in dense granular media. A small perturbation is created on one side of a dense, static packing and examined during its propagation until it arrives at the opposite side. The influence of

  6. Martian gullies: possible formation mechanism by dry granular material..

    Science.gov (United States)

    Cedillo-Flores, Y.; Durand-Manterola, H. J.

    section Some of the geomorphological features in Mars are the gullies Some theories developed tried explain its origin either by liquid water liquid carbon dioxide or flows of dry granular material We made a comparative analysis of the Martian gullies with the terrestrial ones We propose that the mechanism of formation of the gullies is as follows In winter CO 2 snow mixed with sand falls in the terrain In spring the CO 2 snow sublimate and gaseous CO 2 make fluid the sand which flows like liquid eroding the terrain and forming the gullies By experimental work with dry granular material we simulated the development of the Martian gullies injecting air in the granular material section We present the characteristics of some terrestrial gullies forms at cold environment sited at Nevado de Toluca Volcano near Toluca City M e xico We compare them with Martian gullies choose from four different areas to target goal recognize or to distinguish to identify possible processes evolved in its formation Also we measured the lengths of those Martian gullies and the range was from 24 m to 1775 meters Finally we present results of our experimental work at laboratory with dry granular material

  7. Seismic wave propagation in granular media

    Science.gov (United States)

    Tancredi, Gonzalo; López, Francisco; Gallot, Thomas; Ginares, Alejandro; Ortega, Henry; Sanchís, Johnny; Agriela, Adrián; Weatherley, Dion

    2016-10-01

    Asteroids and small bodies of the Solar System are thought to be agglomerates of irregular boulders, therefore cataloged as granular media. It is a consensus that many asteroids might be considered as rubble or gravel piles.Impacts on their surface could produce seismic waves which propagate in the interior of these bodies, thus causing modifications in the internal distribution of rocks and ejections of particles and dust, resulting in a cometary-type comma.We present experimental and numerical results on the study of propagation of impact-induced seismic waves in granular media, with special focus on behavior changes by increasing compression.For the experiment, we use an acrylic box filled with granular materials such as sand, gravel and glass spheres. Pressure inside the box is controlled by a movable side wall and measured with sensors. Impacts are created on the upper face of the box through a hole, ranging from free-falling spheres to gunshots. We put high-speed cameras outside the box to record the impact as well as piezoelectic sensors and accelerometers placed at several depths in the granular material to detect the seismic wave.Numerical simulations are performed with ESyS-Particle, a software that implements the Discrete Element Method. The experimental setting is reproduced in the numerical simulations using both individual spherical particles and agglomerates of spherical particles shaped as irregular boulders, according to rock models obtained with a 3D scanner. The numerical experiments also reproduces the force loading on one of the wall to vary the pressure inside the box.We are interested in the velocity, attenuation and energy transmission of the waves. These quantities are measured in the experiments and in the simulations. We study the dependance of these three parameters with characteristics like: impact speed, properties of the target material and the pressure in the media.These results are relevant to understand the outcomes of impacts in

  8. Raman microspectroscopy of nucleus and cytoplasm for human colon cancer diagnosis.

    Science.gov (United States)

    Liu, Wenjing; Wang, Hongbo; Du, Jingjing; Jing, Chuanyong

    2017-11-15

    Subcellular Raman analysis is a promising clinic tool for cancer diagnosis, but constrained by the difficulty of deciphering subcellular spectra in actual human tissues. We report a label-free subcellular Raman analysis for use in cancer diagnosis that integrates subcellular signature spectra by subtracting cytoplasm from nucleus spectra (Nuc.-Cyt.) with a partial least squares-discriminant analysis (PLS-DA) model. Raman mapping with the classical least-squares (CLS) model allowed direct visualization of the distribution of the cytoplasm and nucleus. The PLS-DA model was employed to evaluate the diagnostic performance of five types of spectral datasets, including non-selective, nucleus, cytoplasm, ratio of nucleus to cytoplasm (Nuc./Cyt.), and nucleus minus cytoplasm (Nuc.-Cyt.), resulting in diagnostic sensitivity of 88.3%, 84.0%, 98.4%, 84.5%, and 98.9%, respectively. Discriminating between normal and cancerous cells of actual human tissues through subcellular Raman markers is feasible, especially when using the nucleus-cytoplasm difference spectra. The subcellular Raman approach had good stability, and had excellent diagnostic performance for rectal as well as colon tissues. The insights gained from this study shed new light on the general applicability of subcellular Raman analysis in clinical trials. Copyright © 2017 Elsevier B.V. All rights reserved.

  9. Traffic and Granular Flow’05

    CERN Document Server

    Pöschel, Thorsten; Kühne, Reinhart; Schreckenberg, Michael; Wolf, Dietrich

    2007-01-01

    The conference series Tra?c and Granular Flow has been established in 1995 and has since then been held biannually. At that time, the investigation of granular materials and tra?c was still somewhat exotic and was just starting to become popular among physicists. Originally the idea behind this conference series was to facilitate the c- vergence of the two ?elds, inspired by the similarities of certain phenomena and the use of similar theoretical methods. However, in recent years it has become clear that probably the di?erences between the two systems are much more interesting than the similarities. Nevertheless, the importance of various interrelations among these ?elds is still growing. The workshop continues to o?er an opportunity to stimulate this interdisciplinary research. Over the years the spectrum of topics has become much broader and has included also problems related to topics ranging from social dynamics to - ology. The conference manages to bring together people with rather di?erent background, r...

  10. Magnetoresistances in Ni80Fe20-ITO granular film

    International Nuclear Information System (INIS)

    Gao Chunhong; Chen Ke; Yang Yanxia; Xiong Yuanqiang; Chen Peng

    2012-01-01

    Highlights: ► Magnetoresistance (MR) in Ni 80 Fe 20 -ITO granular film are investigated. ► MR is positive at high temperature, and is negative at low temperature. ► MR results from the competition among three mechanisms. - Abstract: The magnetic properties, electrical properties and magnetoresistance are investigated in Ni 80 Fe 20 -ITO granular film with various volume fractions V NF of Ni 80 Fe 20 . The room temperature magnetization hysteresis of sample with V NF = 25% shows superparamagnetic behavior. Current-voltage curve of sample with V NF = 25% at 175 K shows typical tunneling-type behavior. The magnetoresistances of samples with low V NF are positive at high temperature, and are negative at low temperature. The temperature-dependent magnetoresistances result from the competition among ordinary magnetoresistances, the granular-typed tunneling magnetoresistance and the spin-mixing induced magnetoresistances.

  11. Granular nanocrystalline zirconia electrolyte layers deposited on porous SOFC cathode substrates

    International Nuclear Information System (INIS)

    Seydel, Johannes; Becker, Michael; Ivers-Tiffee, Ellen; Hahn, Horst

    2009-01-01

    Thin granular yttria-stabilized zirconia (YSZ) electrolyte layers were prepared by chemical vapor synthesis and deposition (CVD/CVS) on a porous substoichiometric lanthanum-strontium-manganite (ULSM) solid oxide fuel cell cathode substrate. The substrate porosity was optimized with a screen printed fine porous buffer layer. Structural analysis by scanning electron microscopy showed a homogeneous, granular nanocrystalline layer with a microstructure that was controlled via reactor settings. The CVD/CVS gas-phase process enabled the deposition of crack-free granular YSZ films on porous ULSM substrates. The electrolyte layers characterized with impedance spectroscopy exhibited enhanced grain boundary conductivity.

  12. Multi-granularity synthesis segmentation for high spatial resolution Remote sensing images

    International Nuclear Information System (INIS)

    Yi, Lina; Liu, Pengfei; Qiao, Xiaojun; Zhang, Xiaoning; Gao, Yuan; Feng, Boyan

    2014-01-01

    Traditional segmentation method can only partition an image in a single granularity space, with segmentation accuracy limited to the single granularity space. This paper proposes a multi-granularity synthesis segmentation method for high spatial resolution remote sensing images based on a quotient space model. Firstly, we divide the whole image area into multiple granules (regions), each region is consisted of ground objects that have similar optimal segmentation scale, and then select and synthesize the sub-optimal segmentations of each region to get the final segmentation result. To validate this method, the land cover category map is used to guide the scale synthesis of multi-scale image segmentations for Quickbird image land use classification. Firstly, the image is coarsely divided into multiple regions, each region belongs to a certain land cover category. Then multi-scale segmentation results are generated by the Mumford-Shah function based region merging method. For each land cover category, the optimal segmentation scale is selected by the supervised segmentation accuracy assessment method. Finally, the optimal scales of segmentation results are synthesized under the guide of land cover category. Experiments show that the multi-granularity synthesis segmentation can produce more accurate segmentation than that of a single granularity space and benefit the classification

  13. Mathematics and Mechanics of Granular Materials

    CERN Document Server

    Hill, James M

    2005-01-01

    Granular or particulate materials arise in almost every aspect of our lives, including many familiar materials such as tea, coffee, sugar, sand, cement and powders. At some stage almost every industrial process involves a particulate material, and it is usually the cause of the disruption to the smooth running of the process. In the natural environment, understanding the behaviour of particulate materials is vital in many geophysical processes such as earthquakes, landslides and avalanches. This book is a collection of current research from some of the major contributors in the topic of modelling the behaviour of granular materials. Papers from every area of current activity are included, such as theoretical, numerical, engineering and computational approaches. This book illustrates the numerous diverse approaches to one of the outstanding problems of modern continuum mechanics.

  14. Self-assembly and speed distributions of active granular particles

    Science.gov (United States)

    Sánchez, R.; Díaz-Leyva, P.

    2018-06-01

    The relationship between the dynamics of self-propelled systems and the self-assembly of structured clusters are studied via the experimental speed distributions of submonolayers of self-propelled granular particles. A distribution developed for non-self-propelled granular particles describes the speed distributions remarkably well, despite some of the assumptions behind its original derivation not being applicable. This is explained in terms of clustering and dissipation being the key phenomena governing this regime.

  15. Grain scale observations of stick-slip dynamics in fluid saturated granular fault gouge

    Science.gov (United States)

    Johnson, P. A.; Dorostkar, O.; Guyer, R. A.; Marone, C.; Carmeliet, J.

    2017-12-01

    We are studying granular mechanics during slip. In the present work, we conduct coupled computational fluid dynamics (CFD) and discrete element method (DEM) simulations to study grain scale characteristics of slip instabilities in fluid saturated granular fault gouge. The granular sample is confined with constant normal load (10 MPa), and sheared with constant velocity (0.6 mm/s). This loading configuration is chosen to promote stick-slip dynamics, based on a phase-space study. Fluid is introduced in the beginning of stick phase and characteristics of slip events i.e. macroscopic friction coefficient, kinetic energy and layer thickness are monitored. At the grain scale, we monitor particle coordination number, fluid-particle interaction forces as well as particle and fluid kinetic energy. Our observations show that presence of fluids in a drained granular fault gouge stabilizes the layer in the stick phase and increases the recurrence time. In saturated model, we observe that average particle coordination number reaches higher values compared to dry granular gouge. Upon slip, we observe that a larger portion of the granular sample is mobilized in saturated gouge compared to dry system. We also observe that regions with high particle kinetic energy are correlated with zones of high fluid motion. Our observations highlight that spatiotemporal profile of fluid dynamic pressure affects the characteristics of slip instabilities, increasing macroscopic friction coefficient drop, kinetic energy release and granular layer compaction. We show that numerical simulations help characterize the micromechanics of fault mechanics.

  16. Association of inclusion body myositis with T cell large granular lymphocytic leukaemia

    DEFF Research Database (Denmark)

    Greenberg, Steven A; Pinkus, Jack L; Amato, Anthony A

    2016-01-01

    SEE HOHLFELD AND SCHULZE-KOOPS DOI101093/BRAIN/AWW053 FOR A SCIENTIFIC COMMENTARY ON THIS ARTICLE: Inclusion body myositis and T cell large granular lymphocytic leukaemia are rare diseases involving pathogenic cytotoxic CD8+ T cells. After encountering four patients with both disorders, we...... prospectively screened 38 patients with inclusion body myositis for the presence of expanded large granular lymphocyte populations by standard clinical laboratory methods (flow cytometry, examination of blood smears, and T cell receptor gene rearrangements), and performed muscle immunohistochemistry for CD8, CD......57, and TIA1. Most (22/38; 58%) patients with inclusion body myositis had aberrant populations of large granular lymphocytes in their blood meeting standard diagnostic criteria for T cell large granular lymphocytic leukaemia. These T cell populations were clonal in 20/20 patients and stably present...

  17. Confined granular flow in silos experimental and numerical investigations

    CERN Document Server

    Tejchman, Jacek

    2013-01-01

      During confined flow of bulk solids in silos some characteristic phenomena can be created, such as: —         sudden and significant increase of wall stresses, —         different flow patterns, —         formation and propagation of wall and interior shear zones, —         fluctuation of pressures and, —         strong autogenous dynamic effects. These phenomena have not been described or explained in detail yet. The main intention of the experimental and theoretical research presented in this book is to explain the above mentioned phenomena in granular bulk solids and to describe them with numerical FE models verified by experimental results.

  18. Characterization of Novel Cytoplasmic PARP in the Brain of Octopus vulgaris

    Science.gov (United States)

    DE LISA, EMILIA; DE MAIO, ANNA; MOROZ, LEONID L.; MOCCIA, FRANCESCO; MENNELLA, MARIA ROSARIA FARAONE; DI COSMO, ANNA

    2014-01-01

    Recent investigation has focused on the participation of the poly (ADP-ribose) polymerase (PARP) reaction in the invertebrate central nervous system (CNS) during the process of long-term memory (LTM). In this paper, we characterize, localize, and assign a possible role to a cytoplasmic PARP in the brain of Octopus vulgaris. PARP activity was assayed in optic lobes, supraesophageal mass, and optic nerves. The highest levels of enzyme were found in the cytoplasmic fraction. Hyper-activation of the enzyme was detected in Octopus brain after visual discrimination training. Finally, cytoplasmic PARP was found to inhibit Octopus vulgaris actin polymerization. We propose that the cytoplasmic PARP plays a role in vivo to induce the cytoskeletonal reorganization that occurs during learning-induced neuronal plasticity. PMID:22815366

  19. CEMS and XRD studies on changing shape of iron nano-particles by irradiation of Au ions of Fe-implanted Al2O3 granular layer

    International Nuclear Information System (INIS)

    Kato, T.; Wakabayashi, H.; Hashimoto, M.; Toriyama, T.; Taniguchi, S.; Hayashi, N.; Sakamoto, I.

    2007-01-01

    In order to observe an inverse Ostwald ripening of Fe nano-particles in Fe-implanted Al 2 O 3 granular layers, 3 MeV Au ions were irradiated to Fe nano-particles in these layers with doses of 0.5x and 1.5x10 16 ions/cm 2 . It was found by Conversion Electron Mossbauer Spectroscopy (CEMS) that the inverse Ostwald ripening occurred by fractions of percentages and the magnetic anisotropy of Fe nano-particles was induced to the direction of Au ion beam, i.e. perpendicular to the granular plane. The average crystallite diameters of Fe nano-particles for Au ions unirradiated and irradiated samples were measured using Scherrer's formula from FWHM of Fe (110) X-ray Diffraction (XRD) patterns obtained by 2θ and 2θ/θ methods. It was confirmed that the average crystallite diameters of Fe nano-particles in Fe-implanted Al 2 O 3 granular layers were extended by Au ions irradiation. (author)

  20. An update on blast furnace granular coal injection

    Energy Technology Data Exchange (ETDEWEB)

    Hill, D.G. [Bethlehem Steel Corp., Burns Harbor, IN (United States); Strayer, T.J.; Bouman, R.W. [Bethlehem Steel Corp., PA (United States)

    1997-12-31

    A blast furnace coal injection system has been constructed and is being used on the furnace at the Burns Harbor Division of Bethlehem Steel. The injection system was designed to deliver both granular (coarse) and pulverized (fine) coal. Construction was completed on schedule in early 1995. Coal injection rates on the two Burns Harbor furnaces were increased throughout 1995 and was over 200 lbs/ton on C furnace in September. The injection rate on C furnace reached 270 lbs/ton by mid-1996. A comparison of high volatile and low volatile coals as injectants shows that low volatile coal replaces more coke and results in a better blast furnace operation. The replacement ratio with low volatile coal is 0.96 lbs coke per pound of coal. A major conclusion of the work to date is that granular coal injection performs very well in large blast furnaces. Future testing will include a processed sub-bituminous coal, a high ash coal and a direct comparison of granular versus pulverized coal injection.

  1. Curious Sex Ratios and Cytoplasmic Genes

    Indian Academy of Sciences (India)

    instances of curious sex ratios exemplify an important principle: the fitness ..... markable transition - the whole means of sex determination has changed. No longer ... to the cytoplasmic symbiont is self-evident; the symbionts simply increase the.

  2. Breakage mechanics for granular materials in surface-reactive environments

    Science.gov (United States)

    Zhang, Yida; Buscarnera, Giuseppe

    2018-03-01

    It is known that the crushing behaviour of granular materials is sensitive to the state of the fluids occupying the pore space. Here, a thermomechanical theory is developed to link such macroscopic observations with the physico-chemical processes operating at the microcracks of individual grains. The theory relies on the hypothesis that subcritical fracture propagation at intra-particle scale is the controlling mechanism for the rate-dependent, water-sensitive compression of granular specimens. First, the fracture of uniaxially compressed particles in surface-reactive environments is studied in light of irreversible thermodynamics. Such analysis recovers the Gibbs adsorption isotherm as a central component linking the reduction of the fracture toughness of a solid to the increase of vapour concentration. The same methodology is then extended to assemblies immersed in wet air, for which solid-fluid interfaces have been treated as a separate phase. It is shown that this choice brings the solid surface energy into the dissipation equations of the granular matrix, thus providing a pathway to (i) integrate the Gibbs isotherm with the continuum description of particle assemblies and (ii) reproduce the reduction of their yield strength in presence of high relative humidity. The rate-effects involved in the propagation of cracks and the evolution of breakage have been recovered by considering non-homogenous dissipation potentials associated with the creation of surface area at both scales. It is shown that the proposed model captures satisfactorily the compression response of different types of granular materials subjected to varying relative humidity. This result was achieved simply by using parameters based on the actual adsorption characteristics of the constituting minerals. The theory therefore provides a physically sound and thermodynamically consistent framework to study the behaviour of granular solids in surface-reactive environments.

  3. Granular flow down a flexible inclined plane

    Directory of Open Access Journals (Sweden)

    Sonar Prasad

    2017-01-01

    Full Text Available Discrete and continuous systems are commonly studied individually, but seldom together. Indeed, granular flows are typically studied through flows over a rigid base. Here, we investigate the behaviour of granular flows over an inclined, flexible base. The flexible base is modeled as a rigid platform mounted on springs and has one degree of freedom. The base vibrations are introduced by the flow. We simulate such flows through a discrete element method and compare with experiments. We find that a flexible base increased the upper limit of the inclination up to which a steady flow is possible by at least 3 degrees. This stabilized zone may have important implications in applications such as conveyor belts and chutes.

  4. Granularity as a Cognitive Factor in the Effectiveness of Business Process Model Reuse

    Science.gov (United States)

    Holschke, Oliver; Rake, Jannis; Levina, Olga

    Reusing design models is an attractive approach in business process modeling as modeling efficiency and quality of design outcomes may be significantly improved. However, reusing conceptual models is not a cost-free effort, but has to be carefully designed. While factors such as psychological anchoring and task-adequacy in reuse-based modeling tasks have been investigated, information granularity as a cognitive concept has not been at the center of empirical research yet. We hypothesize that business process granularity as a factor in design tasks under reuse has a significant impact on the effectiveness of resulting business process models. We test our hypothesis in a comparative study employing high and low granularities. The reusable processes provided were taken from widely accessible reference models for the telecommunication industry (enhanced Telecom Operations Map). First experimental results show that Recall in tasks involving coarser granularity is lower than in cases of finer granularity. These findings suggest that decision makers in business process management should be considerate with regard to the implementation of reuse mechanisms of different granularities. We realize that due to our small sample size results are not statistically significant, but this preliminary run shows that it is ready for running on a larger scale.

  5. Physical modelling of granular flows at multiple-scales and stress levels

    Science.gov (United States)

    Take, Andy; Bowman, Elisabeth; Bryant, Sarah

    2015-04-01

    The rheology of dry granular flows is an area of significant focus within the granular physics, geoscience, and geotechnical engineering research communities. Studies performed to better understand granular flows in manufacturing, materials processing or bulk handling applications have typically focused on the behavior of steady, continuous flows. As a result, much of the research on relating the fundamental interaction of particles to the rheological or constitutive behaviour of granular flows has been performed under (usually) steady-state conditions and low stress levels. However, landslides, which are the primary focus of the geoscience and geotechnical engineering communities, are by nature unsteady flows defined by a finite source volume and at flow depths much larger than typically possible in laboratory experiments. The objective of this paper is to report initial findings of experimental studies currently being conducted using a new large-scale landslide flume (8 m long, 2 m wide slope inclined at 30° with a 35 m long horizontal base section) and at elevated particle self-weight in a 10 m diameter geotechnical centrifuge to investigate the granular flow behavior at multiple-scales and stress levels. The transparent sidewalls of the two flumes used in the experimental investigation permit the combination of observations of particle-scale interaction (using high-speed imaging through transparent vertical sidewalls at over 1000 frames per second) with observations of the distal reach of the landslide debris. These observations are used to investigate the applicability of rheological models developed for steady state flows (e.g. the dimensionless inertial number) in landslide applications and the robustness of depth-averaged approaches to modelling dry granular flow at multiple scales. These observations indicate that the dimensionless inertial number calculated for the flow may be of limited utility except perhaps to define a general state (e.g. liquid

  6. PALLADIUM-FACILITATED ELECTROLYTIC DECHLORINATION OF 2-CHLOROBIPHENYL USING A GRANULAR-GRAPHITE ELECTRODE.

    Science.gov (United States)

    Palladium-assisted electrocatalytic dechlorination of 2-chlorobiphenyl (2-Cl BP) in aqueous solutions was conducted in a membrane-separated electrochemical reactor with granular-graphite packed electrodes. The dechlorination took place at a granular-graphite cathode while Pd was ...

  7. Constitutive law of dense granular matter

    International Nuclear Information System (INIS)

    Hatano, Takahiro

    2010-01-01

    The frictional properties of dense granular matter under steady shear flow are investigated using numerical simulation. Shear flow tends to localize near the driving boundary unless the coefficient of restitution is close to zero and the driving velocity is small. The bulk friction coefficient is independent of shear rate in dense and slow flow, whereas it is an increasing function of shear rate in rapid flow. The coefficient of restitution affects the friction coefficient only in such rapid flow. Contrastingly, in dense and slow regime, the friction coefficient is independent of the coefficient of restitution and mainly determined by the elementary friction coefficient and the rotation of grains. It is found that the mismatch between the vorticity of flow and the angular frequency of grains plays a key role to the frictional properties of sheared granular matter.

  8. Quantifying non-ergodic dynamics of force-free granular gases.

    Science.gov (United States)

    Bodrova, Anna; Chechkin, Aleksei V; Cherstvy, Andrey G; Metzler, Ralf

    2015-09-14

    Brownian motion is ergodic in the Boltzmann-Khinchin sense that long time averages of physical observables such as the mean squared displacement provide the same information as the corresponding ensemble average, even at out-of-equilibrium conditions. This property is the fundamental prerequisite for single particle tracking and its analysis in simple liquids. We study analytically and by event-driven molecular dynamics simulations the dynamics of force-free cooling granular gases and reveal a violation of ergodicity in this Boltzmann-Khinchin sense as well as distinct ageing of the system. Such granular gases comprise materials such as dilute gases of stones, sand, various types of powders, or large molecules, and their mixtures are ubiquitous in Nature and technology, in particular in Space. We treat-depending on the physical-chemical properties of the inter-particle interaction upon their pair collisions-both a constant and a velocity-dependent (viscoelastic) restitution coefficient ε. Moreover we compare the granular gas dynamics with an effective single particle stochastic model based on an underdamped Langevin equation with time dependent diffusivity. We find that both models share the same behaviour of the ensemble mean squared displacement (MSD) and the velocity correlations in the limit of weak dissipation. Qualitatively, the reported non-ergodic behaviour is generic for granular gases with any realistic dependence of ε on the impact velocity of particles.

  9. In situ grain fracture mechanics during uniaxial compaction of granular solids

    Science.gov (United States)

    Hurley, R. C.; Lind, J.; Pagan, D. C.; Akin, M. C.; Herbold, E. B.

    2018-03-01

    Grain fracture and crushing are known to influence the macroscopic mechanical behavior of granular materials and be influenced by factors such as grain composition, morphology, and microstructure. In this paper, we investigate grain fracture and crushing by combining synchrotron x-ray computed tomography and three-dimensional x-ray diffraction to study two granular samples undergoing uniaxial compaction. Our measurements provide details of grain kinematics, contacts, average intra-granular stresses, inter-particle forces, and intra-grain crystal and fracture plane orientations. Our analyses elucidate the complex nature of fracture and crushing, showing that: (1) the average stress states of grains prior to fracture vary widely in their relation to global and local trends; (2) fractured grains experience inter-particle forces and stored energies that are statistically higher than intact grains prior to fracture; (3) fracture plane orientations are primarily controlled by average intra-granular stress and contact fabric rather than the orientation of the crystal lattice; (4) the creation of new surfaces during fracture accounts for a very small portion of the energy dissipated during compaction; (5) mixing brittle and ductile grain materials alters the grain-scale fracture response. The results highlight an application of combined x-ray measurements for non-destructive in situ analysis of granular solids and provide details about grain fracture that have important implications for theory and modeling.

  10. Effective elasticity coefficients of native rocks and consolidated granular matter

    International Nuclear Information System (INIS)

    Schulz, Beatrix M.; Schulz, Michael

    2008-01-01

    The elastic coefficients of binary heterogeneous materials, such as several native rock materials or consolidated granular matter will be determined in terms of a perturbation expansion. Furthermore, in order to check the validity of the obtained results, these are compared with numerical investigations using Boole's model of randomly distributed spheres. Finally, we apply the results on several classes of native rocks and consolidated granular materials

  11. Ultrastructural analysis of anastomosis group 9 of Rhizoctonia solani

    International Nuclear Information System (INIS)

    Cedeno, L; Palacios Pru, E

    1996-01-01

    The ultrastructure of R. solani AG-9 (S-21, ATCC 62804) was investigated with transmission electron microscopy (TEM). The most important characteristics were those related with cell wall thickness, cytoplasmic matrix composition, number of nuclei and nucleoli and secretory material production. The majority of examined hyphae showed lateral cell walls thinner than those recorded before. The cytoplasmic matrix consistently appeared differentiated into two classes, one formed by a highly electron dense granular fine material and the other one showing a coloidal substance of very low density which give these cells a 'tiger-like' aspect. The granular dense matrix always had abundant free ribosomes and usually surrounded the cytoplasmic organelles and the septal pore apparatus. The somatic cells showed up to 5 nuclei, some of which with three nucleoli. Masses of secretory material surrounded by membrane were regularly seen in the cytoplasm, with sizes similar to those of nuclei

  12. Divergent evolution in the cytoplasmic domains of PRLR and GHR genes in Artiodactyla

    Directory of Open Access Journals (Sweden)

    Li Meng-Hua

    2009-07-01

    Full Text Available Abstract Background Prolactin receptor (PRLR and growth hormone receptor (GHR belong to the large superfamily of class 1 cytokine receptors. Both of them have been identified as candidate genes affecting key quantitative traits, like growth and reproduction in livestock. We have previously studied the molecular anatomy of the cytoplasmic domain of GHR in different cattle breeds and artiodactyl species. In this study we have analysed the corresponding cytoplasmic signalling region of PRLR. Results We sequenced PRLR gene exon 10, coding for the major part of the cytoplasmic domain, from cattle, American bison, European bison, yak, sheep, pig and wild boar individuals. We found different patterns of variation in the two receptors within and between ruminants and pigs. Pigs and bison species have no variation within GHR exon 10, but show high haplotype diversity for the PRLR exon 10. In cattle, PRLR shows lower diversity than GHR. The Bovinae PRLR haplotype network fits better the known phylogenetic relationships between the species than that of the GHR, where differences within cattle breeds are larger than between the different species in the subfamily. By comparison with the wild boar haplotypes, a high number of subsequent nonsynonymous substitutions seem to have accumulated in the pig PRLR exon 10 after domestication. Conclusion Both genes affect a multitude of traits that have been targets of selection after domestication. The genes seem to have responded differently to different selection pressures imposed by human artificial selection. The results suggest possible effects of selective sweeps in GHR before domestication in the pig lineage or species divergence in the Bison lineage. The PRLR results may be explained by strong directional selection in pigs or functional switching.

  13. Spatial correlations in compressible granular flows

    NARCIS (Netherlands)

    van Noije, T.P.C.; Ernst, M.H.; Brito, R.

    The clustering instability in freely evolving granular fluids manifests itself in the density-density correlation function and structure factor. These functions are calculated from fluctuating hydrodynamics. As time increases, the structure factor of density fluctuations develops a maximum, which

  14. Microbiological aspects of granular methanogenic sludge

    NARCIS (Netherlands)

    Dolfing, J.

    1987-01-01

    The settling characteristics of anaerobic sludge are enhanced by the formation of microbial conglomerates. Various types of conglomerates having different structures, were distinguished in the present study, viz. granules, pellets and flocs (chapter 1). Granular methanogenic sludge, often

  15. Microservices: Granularity vs. Performance

    OpenAIRE

    Shadija, Dharmendra; Rezai, Mo; Hill, Richard

    2017-01-01

    Microservice Architectures (MA) have the potential to increase the agility of software development. In an era where businesses require software applications to evolve to support emerging software requirements, particularly for Internet of Things (IoT) applications, we examine the issue of microservice granularity and explore its effect upon application latency. Two approaches to microservice deployment are simulated; the first with microservices in a single container, and the second with micr...

  16. The angle of repose of spherical grains in granular Hele–Shaw cells: a molecular dynamics study

    International Nuclear Information System (INIS)

    Maleki, Hamed; Ebrahimi, Fatemeh; Oskoee, Ehsan Nedaaee

    2008-01-01

    We report the results of three-dimensional molecular dynamic simulations on the angle of repose of a sandpile formed by pouring mono-sized cohesionless spherical grains into a granular Hele–Shaw cell. In particular, we are interested in investigating the effects of those variables which may have a significant impact on the pattern formation of granular mixtures in Hele–Shaw cells. The results indicate that the frictional forces influence the formation of piles on the grain level remarkably. Furthermore, we see that increasing grain insertion rate decreases the angle of repose slightly. We also find that the cell thickness is a significant factor and the angle of repose decays when the size of the gap between the lateral walls increases. In addition to agreeing with the experimental exponential decay law, our results are in accordance with a recently proposed model which takes into account the arching effects. Using grains with different sizes reveals that the behaviour of the angle of repose when both size and cell thickness are varied is controlled by a scaled function of the ratio of these two variables

  17. Anomalous infrared absorption in granular superconductors

    International Nuclear Information System (INIS)

    Carr, G.L.; Garland, J.C.; Tanner, D.B.

    1983-01-01

    Granular superconductors are shown to have a far-infrared absorption that is larger when the samples are superconducting than when they are normal. By constrast, theoretical models for these materials predict that when the samples become superconducting, the absorption should decrease

  18. NMR experiments on a three-dimensional vibrofluidized granular medium

    Science.gov (United States)

    Huan, Chao; Yang, Xiaoyu; Candela, D.; Mair, R. W.; Walsworth, R. L.

    2004-04-01

    A three-dimensional granular system fluidized by vertical container vibrations was studied using pulsed field gradient NMR coupled with one-dimensional magnetic resonance imaging. The system consisted of mustard seeds vibrated vertically at 50 Hz, and the number of layers Nl⩽4 was sufficiently low to achieve a nearly time-independent granular fluid. Using NMR, the vertical profiles of density and granular temperature were directly measured, along with the distributions of vertical and horizontal grain velocities. The velocity distributions showed modest deviations from Maxwell-Boltzmann statistics, except for the vertical velocity distribution near the sample bottom, which was highly skewed and non-Gaussian. Data taken for three values of Nl and two dimensionless accelerations Γ=15,18 were fitted to a hydrodynamic theory, which successfully models the density and temperature profiles away from the vibrating container bottom. A temperature inversion near the free upper surface is observed, in agreement with predictions based on the hydrodynamic parameter μ which is nonzero only in inelastic systems.

  19. Sealing of boreholes using natural, compatible materials: Granular salt

    International Nuclear Information System (INIS)

    Finley, R.E.; Zeuch, D.H.; Stormont, J.C.; Daemen, J.J.K.

    1994-01-01

    Granular salt can be used to construct high performance permanent seals in boreholes which penetrate rock salt formations. These seals are described as seal systems comprised of the host rock, the seal material, and the seal rock interface. The performance of these seal systems is defined by the complex interactions between these seal system components through time. The interactions are largely driven by the creep of the host formation applying boundary stress on the seal forcing host rock permeability with time. The immediate permeability of these seals is dependent on the emplaced density. Laboratory test results suggest that careful emplacement techniques could results in immediate seal system permeability on the order of 10 -16 m 2 to 10 -18 m 2 (10 -4 darcy to 10 -6 ). The visco-plastic behavior of the host rock coupled with the granular salts ability to ''heal'' or consolidate make granular salt an ideal sealing material for boreholes whose permanent sealing is required

  20. Tumor de células granulares de la región anal: Presentación de 1 caso

    Directory of Open Access Journals (Sweden)

    Isnerio Valerio Arzuaga Ánderson

    2001-06-01

    Full Text Available Se informa un caso de tumor de células granulares (mioblastoma de la región anal, en una mujer de 54 años de edad que acudió al Hospital Clinicoquirúrgico Docente "Joaquín Albarrán" por "quiste palpable en las márgenes del ano. El tratamiento que se realizó fue la resección local del tumor. Se analizaron los patrones histopatológicos e inmunohistoquímicos, los cuales se correspondieron con los reportados en la literatura médica hasta el presenteThe authors present a case of granular cell tumor (myoblastoma of the anal region in a woman aged 54, who was attended at "Joaquin Albarrán" Clinical Surgical Hospital due to a palpable "cyst" in the anal edges. The treatment applied consisted in local resection of the tumor. Histopathologic and immunohistochemical patterns were analyzed and they corresponded to those reported in medical literature

  1. Extension of PIV for measuring granular temperature field in dense fluidized beds.

    NARCIS (Netherlands)

    Dijkhuizen, W.; Bokkers, G.A.; Deen, N.G.; van Sint Annaland, M.; Kuipers, J.A.M.

    2007-01-01

    In this work a particle image velocimetry (PIV) technique has been extended to enable the simultaneous measurement of the instantaneous velocity and granular temperature fields. The PIV algorithm has been specifically optimized for dense granular systems and has been thoroughly tested with

  2. Granular corneal dystrophy

    OpenAIRE

    Castillo Pérez, Alexeide de la C; Vilches Lescaille, Daysi; Noriega, Justo Luis; Martínez Balido, Daneel; León Balbón, Bárbaro Ramón; León Bernal, Danysleidi

    2015-01-01

    Las distrofias corneales constituyen un conjunto de enfermedades que presentan, en su mayoría, una baja incidencia y se caracterizan por acúmulo de material hialino o amiloide que disminuyen la transparencia corneal. La distrofia granular es una enfermedad autosómica dominante que presenta opacidades grises en el estroma superficial central de la córnea y se hacen visibles en la primera y segunda décadas de la vida, lo que provoca disminución de la visión más significativa cerca de los 40 año...

  3. A trans-phase granular continuum relation and its use in simulation

    Science.gov (United States)

    Kamrin, Ken; Dunatunga, Sachith; Askari, Hesam

    The ability to model a large granular system as a continuum would offer tremendous benefits in computation time compared to discrete particle methods. However, two infamous problems arise in the pursuit of this vision: (i) the constitutive relation for granular materials is still unclear and hotly debated, and (ii) a model and corresponding numerical method must wear ``many hats'' as, in general circumstances, it must be able to capture and accurately represent the material as it crosses through its collisional, dense-flowing, and solid-like states. Here we present a minimal trans-phase model, merging an elastic response beneath a fictional yield criterion, a mu(I) rheology for liquid-like flow above the static yield criterion, and a disconnection rule to model separation of the grains into a low-temperature gas. We simulate our model with a meshless method (in high strain/mixing cases) and the finite-element method. It is able to match experimental data in many geometries, including collapsing columns, impact on granular beds, draining silos, and granular drag problems.

  4. Numerical investigations on flow dynamics of prismatic granular materials using the discrete element method

    Science.gov (United States)

    Hancock, W.; Weatherley, D.; Wruck, B.; Chitombo, G. P.

    2012-04-01

    The flow dynamics of granular materials is of broad interest in both the geosciences (e.g. landslides, fault zone evolution, and brecchia pipe formation) and many engineering disciplines (e.g chemical engineering, food sciences, pharmaceuticals and materials science). At the interface between natural and human-induced granular media flow, current underground mass-mining methods are trending towards the induced failure and subsequent gravitational flow of large volumes of broken rock, a method known as cave mining. Cave mining relies upon the undercutting of a large ore body, inducement of fragmentation of the rock and subsequent extraction of ore from below, via hopper-like outlets. Design of such mines currently relies upon a simplified kinematic theory of granular flow in hoppers, known as the ellipsoid theory of mass movement. This theory assumes that the zone of moving material grows as an ellipsoid above the outlet of the silo. The boundary of the movement zone is a shear band and internal to the movement zone, the granular material is assumed to have a uniformly high bulk porosity compared with surrounding stagnant regions. There is however, increasing anecdotal evidence and field measurements suggesting this theory fails to capture the full complexity of granular material flow within cave mines. Given the practical challenges obstructing direct measurement of movement both in laboratory experiments and in-situ, the Discrete Element Method (DEM [1]) is a popular alternative to investigate granular media flow. Small-scale DEM studies (c.f. [3] and references therein) have confirmed that movement within DEM silo flow models matches that predicted by ellipsoid theory, at least for mono-disperse granular material freely outflowing at a constant rate. A major draw-back of these small-scale DEM studies is that the initial bulk porosity of the simulated granular material is significantly higher than that of broken, prismatic rock. In this investigation, more

  5. Magnetite nanoparticles as reporters for microcarrier processing in cytoplasm

    Energy Technology Data Exchange (ETDEWEB)

    Reibetanz, Uta, E-mail: uta.reibetanz@medizin.uni-leipzig.de [Translational Centre for Regenerative Medicine (TRM) Leipzig, Universitaet Leipzig, Philipp-Rosenthal-Strasse 55, 04103 Leipzig (Germany); Institute for Medical Physics and Biophysics, Medical Faculty, Universitaet Leipzig, Haertelstrasse 16-18, 04107 Leipzig (Germany); Jankuhn, Steffen, E-mail: jankuhn@uni-leipzig.de [Division of Nuclear Solid State Physics, Faculty of Physics and Geosciences, Universitaet Leipzig, Linnestrasse 5, 04103 Leipzig (Germany); Office for Environmental Protection and Occupational Safety, Universitaet Leipzig, Ritterstrasse 24, 04109 Leipzig (Germany)

    2011-10-15

    The development and therapeutic application of drug delivery systems based on colloidal microcarriers layer-by-layer coated with biopolyelectrolytes requires the investigation of their processing inside the cell for the successful and efficient transport and release of the active agents. The present study is focused on the time-dependent multilayer decomposition and the subsequent release of active agents to the cytoplasm. Magnetite nanoparticles (MNP) were used as reporter agents integrated into the protamine sulfate/dextran sulfate basis multilayer on colloidal SiO{sub 2} cores. This functionalization allows the monitoring of the multilayer decomposition due to the detection of the MNP release, visualized by means of proton-induced X-ray emission (PIXE) by elemental distribution of Si and Fe. The direct correlation between the microcarrier localization in endolysosomes and cytoplasm of HEK293T/17 cells via confocal laser scanning microscopy (CLSM) and the elemental distribution (PIXE) allows tracing the fate of the MNP-coated microcarriers in cytoplasm, and thus the processing of the multilayer. Microcarrier/cell co-incubation experiments of 6 h, 24 h, 48 h, and 72 h show that a MNP release and a slight expansion into the cytoplasm occurs after a longer co-incubation of 72 h.

  6. Granular deformation mechanisms in semi-solid alloys

    International Nuclear Information System (INIS)

    Gourlay, C.M.; Dahle, A.K.; Nagira, T.; Nakatsuka, N.; Nogita, K.; Uesugi, K.; Yasuda, H.

    2011-01-01

    Deformation mechanisms in equiaxed, partially solid Al-15 wt.% Cu are studied in situ by coupling shear-cell experiments with synchrotron X-ray radiography. Direct evidence is presented for granular deformation mechanisms in both globular and equiaxed-dendritic samples at solid fractions shortly after crystal impingement. It is demonstrated that dilatancy, arching and jamming occur at the crystal scale, and that these can cause stick-slip flow due to periodic dilation and compaction at low displacement rate. Granular deformation is found to be similar in globular and equiaxed-dendritic samples if length is scaled by the crystal size and packing is considered to occur among crystal envelopes. Rheological differences between the morphologies are discussed in terms of the competition between crystal rearrangement and crystal deformation.

  7. Micromechanical definition of an entropy for quasi-static deformation of granular materials

    NARCIS (Netherlands)

    Rothenburg, L.; Kruyt, Nicolaas P.

    2009-01-01

    A micromechanical theory is formulated for quasi-static deformation of granular materials, which is based on information theory. A reasoning is presented that leads to the definition of an information entropy that is appropriate for quasi-static deformation of granular materials. This definition is

  8. Cytoplasmic p21 is a potential predictor for cisplatin sensitivity in ovarian cancer

    International Nuclear Information System (INIS)

    Xia, Xi; Weng, Yanjie; Liao, Shujie; Han, Zhiqiang; Liu, Ronghua; Zhu, Tao; Wang, Shixuan; Xu, Gang; Meng, Li; Zhou, Jianfeng; Ma, Ding; Ma, Quanfu; Li, Xiao; Ji, Teng; Chen, Pingbo; Xu, Hongbin; Li, Kezhen; Fang, Yong; Weng, Danhui

    2011-01-01

    P21 (WAF1/Cip1) binds to cyclin-dependent kinase complexes and inhibits their activities. It was originally described as an inhibitor of cancer cell proliferation. However, many recent studies have shown that p21 promotes tumor progression when accumulated in the cell cytoplasm. So far, little is known about the correlation between cytoplasmic p21 and drug resistance. This study was aimed to investigate the role of p21 in the cisplatin resistance of ovarian cancer. RT-PCR, western blot and immunofluorescence were used to detect p21 expression and location in cisplatin-resistant ovarian cancer cell line C13* and its parental line OV2008. Regulation of cytoplasmic p21 was performed through transfection of p21 siRNA, Akt2 shRNA and Akt2 constitutively active vector in the two cell lines; their effects on cisplatin-induced apoptosis were evaluated by flow cytometry. Tumor tissue sections of clinical samples were analyzed by immunohistochemistry. p21 predominantly localizes to the cytoplasm in C13* compared to OV2008. Persistent exposure to low dose cisplatin in OV2008 leads to p21 translocation from nuclear to cytoplasm, while it had not impact on p21 localization in C13*. Knockdown of cytoplasmic p21 by p21 siRNA transfection in C13* notably increased cisplatin-induced apoptosis through activation of caspase 3. Inhibition of p21 translocation into the cytoplasm by transfection of Akt2 shRNA into C13* cells significantly increased cisplatin-induced apoptosis, while induction of p21 translocation into the cytoplasm by transfection of constitutively active Akt2 in OV2008 enhanced the resistance to cisplatin. Immunohistochemical analysis of clinical ovarian tumor tissues demonstrated that cytoplasmic p21 was negatively correlated with the response to cisplatin based treatment. Cytoplasmic p21 is a novel biomarker of cisplatin resistance and it may represent a potential therapeutic target for ovarian tumors that are refractory to conventional treatment

  9. Force and flow at the onset of drag in plowed granular media.

    Science.gov (United States)

    Gravish, Nick; Umbanhowar, Paul B; Goldman, Daniel I

    2014-04-01

    We study the transient drag force FD on a localized intruder in a granular medium composed of spherical glass particles. A flat plate is translated horizontally from rest through the granular medium to observe how FD varies as a function of the medium's initial volume fraction, ϕ. The force response of the granular material differs above and below the granular critical state, ϕc, the volume fraction which corresponds to the onset of grain dilatancy. For ϕϕc, FD rapidly rises to a maximum and then decreases over further displacement. The maximum force for ϕ>ϕc increases with increasing drag velocity. In quasi-two-dimensional drag experiments, we use granular particle image velocimetry (PIV) to measure time resolved strain fields associated with the horizontal motion of a plate started from rest. PIV experiments show that the maxima in FD for ϕ>ϕc are associated with maxima in the spatially averaged shear strain field. For ϕ>ϕc the shear strain occurs in a narrow region in front of the plate, a shear band. For ϕϕc, surface particles move only during the formation of the shear band, coincident with the maxima in FD, after which the particles remain immobile until the sheared region reaches the measurement region.

  10. Discrete Element study of granular material - Bumpy wall interface behavior

    Science.gov (United States)

    El Cheikh, Khadija; Rémond, Sébastien; Pizette, Patrick; Vanhove, Yannick; Djelal, Chafika

    2016-09-01

    This paper presents a DEM study of a confined granular material sheared between two parallel bumpy walls. The granular material consists of packed dry spherical particles. The bumpiness is modeled by spheres of a given diameter glued on horizontal planes. Different bumpy surfaces are modeled by varying diameter or concentration of glued spheres. The material is sheared by moving the two bumpy walls at fixed velocity. During shear, the confining pressure applied on each bumpy wall is controlled. The effect of wall bumpiness on the effective friction coefficient and on the granular material behavior at the bumpy walls is reported for various shearing conditions. For given bumpiness and confining pressure that we have studied, it is found that the shear velocity does not affect the shear stress. However, the effective friction coefficient and the behavior of the granular material depend on the bumpiness. When the diameter of the glued spheres is larger than about the average grains diameter of the medium, the latter is uniformly sheared and the effective friction coefficient remains constant. For smaller diameters of the glued spheres, the effective friction coefficient increases with the diameter of glued spheres. The influence of glued spheres concentration is significant only for small glued spheres diameters, typically half of average particle diameter of the granular material. In this case, increasing the concentration of glued spheres leads to a decrease in effective friction coefficient and to shear localization at the interface. For different diameters and concentrations of glued spheres, we show that the effect of bumpiness on the effective friction coefficient can be characterized by the depth of interlocking.

  11. Fragility and hysteretic creep in frictional granular jamming.

    Science.gov (United States)

    Bandi, M M; Rivera, M K; Krzakala, F; Ecke, R E

    2013-04-01

    The granular jamming transition is experimentally investigated in a two-dimensional system of frictional, bidispersed disks subject to quasistatic, uniaxial compression without vibrational disturbances (zero granular temperature). Three primary results are presented in this experimental study. First, using disks with different static friction coefficients (μ), we experimentally verify numerical results that predict jamming onset at progressively lower packing fractions with increasing friction. Second, we show that the first compression cycle measurably differs from subsequent cycles. The first cycle is fragile-a metastable configuration with simultaneous jammed and unjammed clusters-over a small packing fraction interval (φ(1)disk displacements over the same packing fraction interval. This fragile behavior is explained through a percolation mechanism of stressed contacts where cluster growth exhibits spatial correlation with disk displacements and contributes to recent results emphasizing fragility in frictional jamming. Control experiments show that the fragile state results from the experimental incompatibility between the requirements for zero friction and zero granular temperature. Measurements with several disk materials of varying elastic moduli E and friction coefficients μ show that friction directly controls the start of the fragile state but indirectly controls the exponential pressure rise. Finally, under repetitive loading (compression) and unloading (decompression), we find the system exhibits pressure hysteresis, and the critical packing fraction φ(c) increases slowly with repetition number. This friction-induced hysteretic creep is interpreted as the granular pack's evolution from a metastable to an eventual structurally stable configuration. It is shown to depend on the quasistatic step size Δφ, which provides the only perturbative mechanism in the experimental protocol, and the friction coefficient μ, which acts to stabilize the pack.

  12. Wave propagation of spectral energy content in a granular chain

    Directory of Open Access Journals (Sweden)

    Shrivastava Rohit Kumar

    2017-01-01

    Full Text Available A mechanical wave is propagation of vibration with transfer of energy and momentum. Understanding the spectral energy characteristics of a propagating wave through disordered granular media can assist in understanding the overall properties of wave propagation through inhomogeneous materials like soil. The study of these properties is aimed at modeling wave propagation for oil, mineral or gas exploration (seismic prospecting or non-destructive testing of the internal structure of solids. The focus is on the total energy content of a pulse propagating through an idealized one-dimensional discrete particle system like a mass disordered granular chain, which allows understanding the energy attenuation due to disorder since it isolates the longitudinal P-wave from shear or rotational modes. It is observed from the signal that stronger disorder leads to faster attenuation of the signal. An ordered granular chain exhibits ballistic propagation of energy whereas, a disordered granular chain exhibits more diffusive like propagation, which eventually becomes localized at long time periods. For obtaining mean-field macroscopic/continuum properties, ensemble averaging has been used, however, such an ensemble averaged spectral energy response does not resolve multiple scattering, leading to loss of information, indicating the need for a different framework for micro-macro averaging.

  13. Numerical insight into the micromechanics of jet erosion of a cohesive granular material

    Directory of Open Access Journals (Sweden)

    Cuéllar Pablo

    2017-01-01

    Full Text Available Here we investigate the physical mechanisms behind the surface erosion of a cohesive granular soil induced by an impinging jet by means of numerical simulations coupling fluid and grains at the microscale. The 2D numerical model combines the Discrete Element and Lattice Boltzmann methods (DEM-LBM and accounts for the granular cohesion with a contact model featuring a paraboloidal yield surface. Here we review first the hydrodynamical conditions imposed by the fluid jet on a solid granular packing, turning then the attention to the impact of cohesion on the erosion kinetics. Finally, the use of an additional subcritical debonding damage model based on the work of Silvani and co-workers provides a novel insight into the internal solicitation of the cohesive granular sample by the impinging jet.

  14. Numerical insight into the micromechanics of jet erosion of a cohesive granular material

    Science.gov (United States)

    Cuéllar, Pablo; Benseghier, Zeyd; Luu, Li-Hua; Bonelli, Stéphane; Delenne, Jean-Yves; Radjaï, Farhang; Philippe, Pierre

    2017-06-01

    Here we investigate the physical mechanisms behind the surface erosion of a cohesive granular soil induced by an impinging jet by means of numerical simulations coupling fluid and grains at the microscale. The 2D numerical model combines the Discrete Element and Lattice Boltzmann methods (DEM-LBM) and accounts for the granular cohesion with a contact model featuring a paraboloidal yield surface. Here we review first the hydrodynamical conditions imposed by the fluid jet on a solid granular packing, turning then the attention to the impact of cohesion on the erosion kinetics. Finally, the use of an additional subcritical debonding damage model based on the work of Silvani and co-workers provides a novel insight into the internal solicitation of the cohesive granular sample by the impinging jet.

  15. Genetic variation among the male sterile cytoplasms induced by gamma irradiation in sugar beets

    International Nuclear Information System (INIS)

    Mikami, Tetsuo; Kinoshita, Toshiro; Takahashi, Man-emon

    1976-01-01

    In sugar beets, cytoplasmic male sterility was induced artificially by radiation treatment. In the present study, four kinds of male sterile strain made from the strain H-2002 with normal cytoplasms were used, and the mode of inheritance of the sterility maintained by these strains was confirmed. Also the hereditary mechanism of pollen fructification recovery was studied, and the newly induced heterotypic property of sterile cytoplasms was examined in comparison with naturally found sterile strains. In each of four produced strains, the male sterility was inherited down to M 4 lines stably through mother plants, and it was presumed that the sterility was caused by highly stable cytoplasmic mutation. In each strain, two pairs of nuclear genes took part in the recovery of pollen fructification, but the mode of action of two genes was different. As the result of mating for verification with O type strain to S cytoplasm strain, it seemed that at least the function as O type was not shown to three strains of γ-60, γ-114 and γ-165, and in the sterile cytoplasms of these three strains, the action of fructification recovery genes different from X and Z arose. It was presumed that the genes of X locus did not take effect in these induced cytoplasms. The possibility that at least four kinds of male sterile cytoplasms different from S were induced from normal cytoplasms by artificial mutation was proved indirectly. (Kako, I.)

  16. Robophysical study of jumping dynamics on granular media

    Science.gov (United States)

    Aguilar, Jeffrey; Goldman, Daniel I.

    2016-03-01

    Characterizing forces on deformable objects intruding into sand and soil requires understanding the solid- and fluid-like responses of such substrates and their effect on the state of the object. The most detailed studies of intrusion in dry granular media have revealed that interactions of fixed-shape objects during free impact (for example, cannonballs) and forced slow penetration can be described by hydrostatic- and hydrodynamic-like forces. Here we investigate a new class of granular interactions: rapid intrusions by objects that change shape (self-deform) through passive and active means. Systematic studies of a simple spring-mass robot jumping on dry granular media reveal that jumping performance is explained by an interplay of nonlinear frictional and hydrodynamic drag as well as induced added mass (unaccounted by traditional intrusion models) characterized by a rapidly solidified region of grains accelerated by the foot. A model incorporating these dynamics reveals that added mass degrades the performance of certain self-deformations owing to a shift in optimal timing during push-off. Our systematic robophysical experiment reveals both new soft-matter physics and principles for robotic self-deformation and control, which together provide principles of movement in deformable terrestrial environments.

  17. Jamming and chaotic dynamics in different granular systems

    Science.gov (United States)

    Maghsoodi, Homayoon; Luijten, Erik

    Although common in nature and industry, the jamming transition has long eluded a concrete, mechanistic explanation. Recently, Banigan et al. (Nat. Phys. 9, 288-292, 2013) proposed a method for characterizing this transition in a granular system in terms of the system's chaotic properties, as quantified by the largest Lyapunov exponent. They demonstrated that in a two-dimensional shear cell the jamming transition coincides with the bulk density at which the system's largest Lyapunov exponent changes sign, indicating a transition between chaotic and non-chaotic regimes. To examine the applicability of this observation to realistic granular systems, we study a model that includes frictional forces within an expanded phase space. Furthermore, we test the generality of the relation between chaos and jamming by investigating the relationship between jamming and the chaotic properties of several other granular systems, notably sheared systems (Howell, D., Behringer R. P., Veje C., Phys. Rev. Lett. 82, 5241-5244, 1999) and systems with a free boundary. Finally, we quantify correlations between the largest Lyapunov vector and collective rearrangements of the system to demonstrate the predictive capabilities enabled by adopting this perspective of jamming.

  18. Positive Selection Driving Cytoplasmic Genome Evolution of the Medicinally Important Ginseng Plant Genus Panax.

    Science.gov (United States)

    Jiang, Peng; Shi, Feng-Xue; Li, Ming-Rui; Liu, Bao; Wen, Jun; Xiao, Hong-Xing; Li, Lin-Feng

    2018-01-01

    Panax L. (the ginseng genus) is a shade-demanding group within the family Araliaceae and all of its species are of crucial significance in traditional Chinese medicine. Phylogenetic and biogeographic analyses demonstrated that two rounds of whole genome duplications accompanying with geographic and ecological isolations promoted the diversification of Panax species. However, contributions of the cytoplasmic genomes to the adaptive evolution of Panax species remained largely uninvestigated. In this study, we sequenced the chloroplast and mitochondrial genomes of 11 accessions belonging to seven Panax species. Our results show that heterogeneity in nucleotide substitution rate is abundant in both of the two cytoplasmic genomes, with the mitochondrial genome possessing more variants at the total level but the chloroplast showing higher sequence polymorphisms at the genic regions. Genome-wide scanning of positive selection identified five and 12 genes from the chloroplast and mitochondrial genomes, respectively. Functional analyses further revealed that these selected genes play important roles in plant development, cellular metabolism and adaptation. We therefore conclude that positive selection might be one of the potential evolutionary forces that shaped nucleotide variation pattern of these Panax species. In particular, the mitochondrial genes evolved under stronger selective pressure compared to the chloroplast genes.

  19. Some exact velocity profiles for granular flow in converging hoppers

    Science.gov (United States)

    Cox, Grant M.; Hill, James M.

    2005-01-01

    Gravity flow of granular materials through hoppers occurs in many industrial processes. For an ideal cohesionless granular material, which satisfies the Coulomb-Mohr yield condition, the number of known analytical solutions is limited. However, for the special case of the angle of internal friction δ equal to ninety degrees, there exist exact parametric solutions for the governing coupled ordinary differential equations for both two-dimensional wedges and three-dimensional cones, both of which involve two arbitrary constants of integration. These solutions are the only known analytical solutions of this generality. Here, we utilize the double-shearing theory of granular materials to determine the velocity field corresponding to these exact parametric solutions for the two problems of gravity flow through converging wedge and conical hoppers. An independent numerical solution for other angles of internal friction is shown to coincide with the analytical solution.

  20. DMPD: Negative regulation of cytoplasmic RNA-mediated antiviral signaling. [Dynamic Macrophage Pathway CSML Database

    Lifescience Database Archive (English)

    Full Text Available 18703349 Negative regulation of cytoplasmic RNA-mediated antiviral signaling. Komur...Show Negative regulation of cytoplasmic RNA-mediated antiviral signaling. PubmedID 18703349 Title Negative r...egulation of cytoplasmic RNA-mediated antiviral signaling. Authors Komuro A, Bamm

  1. Kovacs-Like Memory Effect in Driven Granular Gases

    Science.gov (United States)

    Prados, A.; Trizac, E.

    2014-05-01

    While memory effects have been reported for dense enough disordered systems such as glasses, we show here by a combination of analytical and simulation techniques that they are also intrinsic to the dynamics of dilute granular gases. By means of a certain driving protocol, we prepare the gas in a state where the granular temperature T coincides with its long time limit. However, T does not subsequently remain constant but exhibits a nonmonotonic evolution before reaching its nonequilibrium steady value. The corresponding so-called Kovacs hump displays a normal behavior for weak dissipation (as observed in molecular systems) but is reversed under strong dissipation, where it, thus, becomes anomalous.

  2. A new method for measurement of granular velocities

    International Nuclear Information System (INIS)

    Nyborg Andersen, B.

    1984-01-01

    A new, supplementary method to measure granular velocities is presented. The method utilizes the Doppler shift caused by the line of sight component of the solar rotation to cause a wavelength shift through spectral lines as function of heliocentric angle. By measuring the center-to-limb variation of the granular intensity fluctations at different wavelength positions in the lines, the velocities are found. To do this, assumptions regarding the geometrical structure of the velocity and intensity fields have to be made. Preliminary application of the method results in a steep velocity gradient suggesting zero velocity at a hight of 200 km above tau 500 = 1. Possible causes are discussed

  3. Multi-scale mechanics of granular solids from grain-resolved X-ray measurements

    Science.gov (United States)

    Hurley, R. C.; Hall, S. A.; Wright, J. P.

    2017-11-01

    This work discusses an experimental technique for studying the mechanics of three-dimensional (3D) granular solids. The approach combines 3D X-ray diffraction and X-ray computed tomography to measure grain-resolved strains, kinematics and contact fabric in the bulk of a granular solid, from which continuum strains, grain stresses, interparticle forces and coarse-grained elasto-plastic moduli can be determined. We demonstrate the experimental approach and analysis of selected results on a sample of 1099 stiff, frictional grains undergoing multiple uniaxial compression cycles. We investigate the inter-particle force network, elasto-plastic moduli and associated length scales, reversibility of mechanical responses during cyclic loading, the statistics of microscopic responses and microstructure-property relationships. This work serves to highlight both the fundamental insight into granular mechanics that is furnished by combined X-ray measurements and describes future directions in the field of granular materials that can be pursued with such approaches.

  4. Removal of oxytetracycline and determining its biosorption properties on aerobic granular sludge.

    Science.gov (United States)

    Mihciokur, Hamdi; Oguz, Merve

    2016-09-01

    This study investigates biosorption of Oxytetracycline, a broad-spectrum antibiotic, using aerobic granular sludge as an adsorbent in aqueous solutions. A sequencing batch reactor fed by a synthetic wastewater was operated to create aerobic granular sludge. Primarily, the pore structure and surface area of granular sludge, the chemical structure and the molecular sizes of the pharmaceutical, operating conditions, such as pH, stirring rate, initial concentration of Oxytetracycline, during adsorption process was verified. Subsequently, thermodynamic and kinetic aspects of the adsorption were examined and adsorption isotherm studies were carried out. It was shown that the aerobic granular sludge was a good alternative for biosorption of this pharmaceutical. The pharmaceutical was adsorbed better at pH values of 6-8. The adsorption efficiency increased with rising ionic strength. Also, it was seen that the adsorption process was an exothermic process in terms of thermodynamics. The adsorption can be well explained by Langmuir isotherm model. Copyright © 2016 Elsevier B.V. All rights reserved.

  5. Simultaneous Cr(VI) bio-reduction and methane production by anaerobic granular sludge.

    Science.gov (United States)

    Hu, Qian; Sun, Jiaji; Sun, Dezhi; Tian, Lan; Ji, Yanan; Qiu, Bin

    2018-08-01

    Wastewater containing toxic hexavalent chromium (Cr(VI)) were treated with well-organized anaerobic granular sludge in this study. Results showed that the anaerobic granular sludge rapidly removed Cr(VI), and 2000 µg·L -1 Cr(VI) was completely eliminated within 6 min, which was much faster than the reported duration of removal by reported artificial materials. Sucrose added as a carbon source acted as an initial electron donor to reduce Cr(VI) to Cr(III). This process was considered as the main mechanism of Cr(VI) removal. Methane production by anaerobic granular sludge was improved by the addition of Cr(VI) at a concentration lower than 500 µg·L -1 . Anaerobic granular sludge had a well-organized structure, which presented good resistance against toxic Cr(VI). Trichoccus accelerated the degradation of organic substances to generate acetates with a low Cr(VI) concentration, thereby enhancing methane production by acetotrophic methanogens. Copyright © 2018 Elsevier Ltd. All rights reserved.

  6. Tunable evolutions of shock absorption and energy partitioning in magnetic granular chains

    Science.gov (United States)

    Leng, Dingxin; Liu, Guijie; Sun, Lingyu

    2018-01-01

    In this paper, we investigate the tunable characteristics of shock waves propagating in one-dimensional magnetic granular chains at various chain lengths and magnetic flux densities. According to the Hertz contact theory and Maxwell principle, a discrete element model with coupling elastic and field-induced interaction potentials of adjacent magnetic grains is proposed. We also present hard-sphere approximation analysis to describe the energy partitioning features of magnetic granular chains. The results demonstrate that, for a fixed magnetic field strength, when the chain length is greater than two times of the wave width of the solitary wave, the chain length has little effect on the output energy of the system; for a fixed chain length, the shock absorption and energy partitioning features of magnetic granular chains are remarkably influenced by varying magnetic flux densities. This study implies that the magnetic granular chain is potential to construct adaptive shock absorption components for impulse mitigation.

  7. Iodine Gas Trapping using Granular Porous Bismuth

    Energy Technology Data Exchange (ETDEWEB)

    Yang, Jae Hwan; Shin, Jin Myeong; Park, Jang Jin; Park, Geun Il [Korea Atomic Energy Research Institute, Daejeon (Korea, Republic of); Yim, Mansung [Korea Advanced Institute of Science and Technology, Daejeon (Korea, Republic of)

    2014-05-15

    {sup 129}I is a radionuclide with a very long half-life of 1.57 Χ 10{sup 7} years and has negative health effects to the human body. Therefore, the emission of {sup 129}I into the air is closely regulated by the Environmental Protection Agency (EPA). Many methods for trapping gaseous {sup 129}I have been developed thus far, including wet scrubbing and adsorption using silver loaded zeolites. Although wet scrubbing can effectively remove iodine, it suffers from corrosion of the vessel due to high concentration of the scrubbing solution. Silver loaded zeolites also show effectiveness in capturing {sup 129}I gas, yet weak thermal stability of physisorbed iodine remains a challenge. We studied a novel and facile method to trap iodine gas using bismuth. Granular bismuth having many pores was synthesized using bismuth nitrate and polyvinyl alcohol as a bismuth precursor and pore forming agent, respectively. Reaction of iodine and our samples resulted in an iodine capturing capacity of more than 2 times that of the commercial grade silver exchanged zeolite (AgX). Granular porous bismuths synthesized using bismuth nitrate and PVA show a promising performance in capturing iodine gas. The use of bismuth in trapping {sup 129}I gas can reduce the process cost as bismuth is cheap. Further study is going on to improve the mechanical property of granular porous bismuths for their easy handling.

  8. Iodine Gas Trapping using Granular Porous Bismuth

    International Nuclear Information System (INIS)

    Yang, Jae Hwan; Shin, Jin Myeong; Park, Jang Jin; Park, Geun Il; Yim, Mansung

    2014-01-01

    129 I is a radionuclide with a very long half-life of 1.57 Χ 10 7 years and has negative health effects to the human body. Therefore, the emission of 129 I into the air is closely regulated by the Environmental Protection Agency (EPA). Many methods for trapping gaseous 129 I have been developed thus far, including wet scrubbing and adsorption using silver loaded zeolites. Although wet scrubbing can effectively remove iodine, it suffers from corrosion of the vessel due to high concentration of the scrubbing solution. Silver loaded zeolites also show effectiveness in capturing 129 I gas, yet weak thermal stability of physisorbed iodine remains a challenge. We studied a novel and facile method to trap iodine gas using bismuth. Granular bismuth having many pores was synthesized using bismuth nitrate and polyvinyl alcohol as a bismuth precursor and pore forming agent, respectively. Reaction of iodine and our samples resulted in an iodine capturing capacity of more than 2 times that of the commercial grade silver exchanged zeolite (AgX). Granular porous bismuths synthesized using bismuth nitrate and PVA show a promising performance in capturing iodine gas. The use of bismuth in trapping 129 I gas can reduce the process cost as bismuth is cheap. Further study is going on to improve the mechanical property of granular porous bismuths for their easy handling

  9. Universal stability curve for pattern formation in pulsed gas-solid fluidized beds of sandlike particles

    Science.gov (United States)

    de Martín, Lilian; Ottevanger, Coen; van Ommen, J. Ruud; Coppens, Marc-Olivier

    2018-03-01

    A granular layer can form regular patterns, such as squares, stripes, and hexagons, when it is fluidized with a pulsating gas flow. These structures are reminiscent of the well-known patterns found in granular layers excited through vibration, but, contrarily to them, they have been hardly explored since they were first discovered. In this work, we investigate experimentally the conditions leading to pattern formation in pulsed fluidized beds and the dimensionless numbers governing the phenomenon. We show that the onset to the instability is universal for Geldart B (sandlike) particles and governed by the hydrodynamical parameters Γ =ua/(utϕ ¯) and f /fn , where ua and f are the amplitude and frequency of the gas velocity, respectively, ut is the terminal velocity of the particles, ϕ ¯ is the average solids fraction, and fn is the natural frequency of the bed. These findings suggest that patterns emerge as a result of a parametric resonance between the kinematic waves originating from the oscillating gas flow and the bulk dynamics. Particle friction plays virtually no role in the onset to pattern formation, but it is fundamental for pattern selection and stabilization.

  10. Contact force structure and force chains in 3D sheared granular systems

    Science.gov (United States)

    Mair, Karen; Jettestuen, Espen; Abe, Steffen

    2010-05-01

    Faults often exhibit accumulations of granular debris, ground up to create a layer of rock flour or fault gouge separating the rigid fault walls. Numerical simulations and laboratory experiments of sheared granular materials, suggest that applied loads are preferentially transmitted across such systems by transient force networks that carry enhanced forces. The characterisation of such features is important since their nature and persistence almost certainly influence the macroscopic mechanical stability of these systems and potentially that of natural faults. 3D numerical simulations of granular shear are a valuable investigation tool since they allow us to track individual particle motions, contact forces and their evolution during applied shear, that are difficult to view directly in laboratory experiments or natural fault zones. In characterising contact force distributions, it is important to use global structure measures that allow meaningful comparisons of granular systems having e.g. different grain size distributions, as may be expected at different stages of a fault's evolution. We therefore use a series of simple measures to characterise the structure, such as distributions and correlations of contact forces that can be mapped onto a force network percolation problem as recently proposed by Ostojic and coworkers for 2D granular systems. This allows the use of measures from percolation theory to both define and characterise the force networks. We demonstrate the application of this method to 3D simulations of a sheared granular material. Importantly, we then compare our measure of the contact force structure with macroscopic frictional behaviour measured at the boundaries of our model to determine the influence of the force networks on macroscopic mechanical stability.

  11. Nitrate adsorption from aqueous solution using granular chitosan-Fe{sup 3+} complex

    Energy Technology Data Exchange (ETDEWEB)

    Hu, Qili [School of Water Resources and Environment, China University of Geosciences (Beijing), Beijing, 100083 (China); Key Laboratory of Groundwater Cycle and Environment Evolution,China University of Geosciences (Beijing), Ministry of Education, Beijing, 100083 (China); Chen, Nan, E-mail: chennan@cugb.edu.cn [School of Water Resources and Environment, China University of Geosciences (Beijing), Beijing, 100083 (China); Key Laboratory of Groundwater Cycle and Environment Evolution, China University of Geosciences (Beijing), Ministry of Education, Beijing, 100083 (China); Feng, Chuanping [School of Water Resources and Environment, China University of Geosciences (Beijing), Beijing, 100083 (China); Key Laboratory of Groundwater Cycle and Environment Evolution, China University of Geosciences (Beijing), Ministry of Education, Beijing, 100083 (China); Hu, WeiWu [The Journal Center, China University of Geosciences (Beijing), Beijing, 100083 (China)

    2015-08-30

    Highlights: • Granular chitosan-Fe{sup 3+} complex had high performance for nitrate adsorption. • Granular chitosan-Fe{sup 3+} complex had shorter equilibrium time (1.5 h). • Nitrate adsorption was ascribed to ion exchange and electrostatic attraction. • Granular chitosan-Fe{sup 3+} complex could be regenerated using NaCl solution. - Abstract: In the present study, In order to efficiently remove nitrate, granular chitosan-Fe{sup 3+} complex with high chemical stability and good environmental adaptation was synthesized through precipitation method and characterized using SEM, XRD, BET and FTIR. The nitrate adsorption performance was evaluated by batch experiments. The results indicated that granular chitosan-Fe{sup 3+} complex was an amorphous and mesoporous material. The BET specific surface area and average pore size were 8.98 m{sup 2} g{sup −1} and 56.94 Å, respectively. The point of zero charge was obtained at pH 5. The maximum adsorption capacity reached 8.35 mg NO{sub 3}{sup −}-N g{sup −1} based on Langmuir–Freundlich model. Moreover, no significant change in the nitrate removal efficiency was observed in the pH range of 3.0–10.0. The adverse influence of sulphate on nitrate removal was the most significant, followed by bicarbonate and fluoride, whereas chloride had slightly adverse effect. Adsorption process followed the pseudo-second-order kinetic model, and the experimental equilibrium data were fitted well with the Langmuir–Freundlich and D–R isotherm models. Thermodynamic parameters revealed that nitrate adsorption was a spontaneous and exothermic process. Granular chitosan-Fe{sup 3+} complex could be effectively regenerated by NaCl solution.

  12. Curious Sex Ratios and Cytoplasmic Genes

    Indian Academy of Sciences (India)

    Home; Journals; Resonance – Journal of Science Education; Volume 2; Issue 6. Curious Sex Ratios and Cytoplasmic Genes Microbes Can Distort the Sex Ratio of Populations. Stephen J Freeland Laurence D Hurst. General Article Volume 2 Issue 6 June 1997 pp 68-78 ...

  13. How crowded is the prokaryotic cytoplasm?

    NARCIS (Netherlands)

    Spitzer, Jan; Poolman, Bert; Ferguson, Stuart

    2013-01-01

    We consider biomacromolecular crowding within the cytoplasm of prokaryotic cells as a two-phase system of 'supercrowded' cytogel and 'dilute' cytosol; we simplify and quantify this model for a coccoid cell over a wide range of biomacromolecular crowding. The key result shows that the supercrowded

  14. Lift on side by side intruders of various geometries within a granular flow

    Science.gov (United States)

    Acevedo-Escalante, M. F.; Caballero-Robledo, G. A.

    2017-06-01

    Obstacles within fluids have been widely used in engineering and in physics to study hydrodynamic interactions. In granular matter, objects within a granular flow have helped to understand fundamental features of drag and lift forces. In our group, we have studied numerically the flow mediated interaction between two static disks within a vertical granular flow in a two-dimensional container where the flow velocity and the distance between obstacles were varied. Attractive and repulsive forces were found depending on flow velocity and separation between intruders. The simulations evidenced a relationship between the average flow velocity in a specific section ahead of the obstacles and the attractive-repulsive lift. On the other hand, it was showed that the lift force on an object dragged within a granular medium depends on the shape of the intruder. Here we present experimental results of the interaction between two side-by-side intruders of different shapes within a vertical granular flow. We built a quasi-two-dimensional container in which we placed the intruders and using load cells we measured lift and drag forces during the discharge process for different flow velocities.

  15. The influence of the fractal particle size distribution on the mobility of dry granular materials

    Directory of Open Access Journals (Sweden)

    Vallejo Luis E.

    2017-01-01

    Full Text Available This study presents an experimental analysis on the influence of the particle size distribution (psd on the mobility of dry granular materials. The psd obeys a power law of the form: N(L>d=kd-Df, where N is the number of particles with diameter L greater than a given diameter d, k is a proportionality constant, and Df is the fractal dimension of the psd. No laboratory or numerical study has been conducted to date analysing how a fractal psd influences the mobility of granular flows as in the case of rock avalanches. In this study, the flow characteristics of poly-dispersed granular materials that have a fractal psd were investigated in the laboratory. Granular mixtures having different fractal psd values were placed in a hollow cylinder. The cylinder was lifted and the distance of flow of the mixture was measured with respect to the original position of the cylinder. It was determined that the distance of flow of the mixtures was directly related to their fractal psd values. That is, the larger the distance of flow of the mixture, the larger is the fractal psd of the granular mixture tested. Thus, the fractal psd in dry granular mixtures seems to have a large influence on the easiness by which dry granular mixtures move in the field.

  16. Studies of elasticity, sound propagation and attenuation of acoustic modes in granular media: final report

    Energy Technology Data Exchange (ETDEWEB)

    Makse, Hernan A. [City College of New York, NY (United States). Levich Inst., Dept. of Physcis; Johnson, David L. [Schlumberger-Doll Research, Cambridge, MA (United States)

    2014-09-03

    This is the final report describing the results of DOE Grant # DE-FG02-03ER15458 with original termination date of April 31, 2013, which has been extended to April 31, 2014. The goal of this project is to develop a theoretical and experimental understanding of sound propagation, elasticity and dissipation in granular materials. The topic is relevant for the efficient production of hydrocarbon and for identifying and characterizing the underground formation for storage of either CO2 or nuclear waste material. Furthermore, understanding the basic properties of acoustic propagation in granular media is of importance not only to the energy industry, but also to the pharmaceutical, chemical and agricultural industries. We employ a set of experimental, theoretical and computational tools to develop a study of acoustics and dissipation in granular media. These include the concept effective mass of granular media, normal modes analysis, statistical mechanics frameworks and numerical simulations based on Discrete Element Methods. Effective mass measurements allow us to study the mechanisms of the elastic response and attenuation of acoustic modes in granular media. We perform experiments and simulations under varying conditions, including humidity and vacuum, and different interparticle force-laws to develop a fundamental understanding of the mechanisms of damping and acoustic propagation in granular media. A theoretical statistical approach studies the necessary phase space of configurations in pressure, volume fraction to classify granular materials.

  17. Memory effect in uniformly heated granular gases

    Science.gov (United States)

    Trizac, E.; Prados, A.

    2014-07-01

    We evidence a Kovacs-like memory effect in a uniformly driven granular gas. A system of inelastic hard particles, in the low density limit, can reach a nonequilibrium steady state when properly forced. By following a certain protocol for the drive time dependence, we prepare the gas in a state where the granular temperature coincides with its long time value. The temperature subsequently does not remain constant but exhibits a nonmonotonic evolution with either a maximum or a minimum, depending on the dissipation and on the protocol. We present a theoretical analysis of this memory effect at Boltzmann-Fokker-Planck equation level and show that when dissipation exceeds a threshold, the response can be called anomalous. We find excellent agreement between the analytical predictions and direct Monte Carlo simulations.

  18. ENGINEERING BULLETIN: GRANULAR ACTIVATED CARBON TREATMENT

    Science.gov (United States)

    Granular activated carbon (GAC) treatment is a physicochemical process that removes a wide variety of contaminants by adsorbing them from liquid and gas streams [1, p. 6-3]. This treatment is most commonly used to separate organic contaminants from water or air; however, it can b...

  19. Velocity distributions in dilute granular systems

    NARCIS (Netherlands)

    van Zon, J.S.; Mac Kintosh, F.C.

    2005-01-01

    We investigate the idea that velocity distributions in granular gases are determined mainly by η, the coefficient of restitution and q, which measures the relative importance of heating (or energy input) to collisions. To this end, we study by numerical simulation the properties of inelastic gases

  20. Actin and myosin regulate cytoplasm stiffness in plant cells: a study using optical tweezers

    NARCIS (Netherlands)

    Honing, van der H.S.; Ruijter, de N.C.A.; Emons, A.M.C.; Ketelaar, T.

    2010-01-01

    Here, we produced cytoplasmic protrusions with optical tweezers in mature BY-2 suspension cultured cells to study the parameters involved in the movement of actin filaments during changes in cytoplasmic organization and to determine whether stiffness is an actin-related property of plant cytoplasm.

  1. Granular cell tumor of the esophagus. Report of three cases.

    Science.gov (United States)

    Cohle, S D; McKechnie, J C; Truong, L; Jurco, S

    1981-06-01

    Granular cell tumors, (formerly called myoblastomas) involving the esophagus were encountered in three patients. In all three the tumors were asymptomatic and in two they were multiple. The first published endoscopic photographs of such a tumor are presented. The successful total removal of this neoplasm using the endoscope is described. The pathologic, radiologic and therapeutic aspects of previously reported cases of granular cell tumor of the esophagus are reviewed and compared with the three reported herein.

  2. Experimental study of energy exchanges between two coupled granular gases

    OpenAIRE

    Chastaing , J.-Y; Géminard , J.-C; Naert , A

    2016-01-01

    International audience; We report on the energy exchanges between two granular gases of different densities coupled electrome-chanically by immersed blades attached to dc motors. Zeroing the energy flux between the two subsystems, we demonstrate that an immersed blade is a convenient way to assess the properties of the granular gases, provided that the dissipation in the motor is properly taken into account. In addition, when the two gases have different densities, the fluctuations of the ene...

  3. Experimental investigation of granular dynamics close to the jamming transition

    Science.gov (United States)

    Caballero, G.; Kolb, E.; Lindner, A.; Lanuza, J.; Clément, E.

    2005-06-01

    We present different experiments on dense granular assemblies with the aim of clarifying the notion of 'jamming transition' for these assemblies of non-Brownian particles. The experimental set-ups differ in the way in which external perturbations are applied in order to unjam the systems. The first experiment monitors the response to a locally applied deformation of a model packing at rest. The two other experiments study local and collective dynamics in a granular assembly weakly excited by vibration.

  4. Fine-granularity inference and estimations to network traffic for SDN.

    Directory of Open Access Journals (Sweden)

    Dingde Jiang

    Full Text Available An end-to-end network traffic matrix is significantly helpful for network management and for Software Defined Networks (SDN. However, the end-to-end network traffic matrix's inferences and estimations are a challenging problem. Moreover, attaining the traffic matrix in high-speed networks for SDN is a prohibitive challenge. This paper investigates how to estimate and recover the end-to-end network traffic matrix in fine time granularity from the sampled traffic traces, which is a hard inverse problem. Different from previous methods, the fractal interpolation is used to reconstruct the finer-granularity network traffic. Then, the cubic spline interpolation method is used to obtain the smooth reconstruction values. To attain an accurate the end-to-end network traffic in fine time granularity, we perform a weighted-geometric-average process for two interpolation results that are obtained. The simulation results show that our approaches are feasible and effective.

  5. Fine-granularity inference and estimations to network traffic for SDN.

    Science.gov (United States)

    Jiang, Dingde; Huo, Liuwei; Li, Ya

    2018-01-01

    An end-to-end network traffic matrix is significantly helpful for network management and for Software Defined Networks (SDN). However, the end-to-end network traffic matrix's inferences and estimations are a challenging problem. Moreover, attaining the traffic matrix in high-speed networks for SDN is a prohibitive challenge. This paper investigates how to estimate and recover the end-to-end network traffic matrix in fine time granularity from the sampled traffic traces, which is a hard inverse problem. Different from previous methods, the fractal interpolation is used to reconstruct the finer-granularity network traffic. Then, the cubic spline interpolation method is used to obtain the smooth reconstruction values. To attain an accurate the end-to-end network traffic in fine time granularity, we perform a weighted-geometric-average process for two interpolation results that are obtained. The simulation results show that our approaches are feasible and effective.

  6. Cytoplasmic Kaiso is associated with poor prognosis in non-small cell lung cancer

    International Nuclear Information System (INIS)

    Dai, Shun-Dong; Wang, Yan; Miao, Yuan; Zhao, Yue; Zhang, Yong; Jiang, Gui-Yang; Zhang, Peng-Xin; Yang, Zhi-Qiang; Wang, En-Hua

    2009-01-01

    Kaiso has been identified as a new member of the POZ-zinc finger family of transcription factors that are implicated in development and cancer. Although controversy still exists, Kaiso is supposed to be involved in human cancer. However, there is limited information regarding the clinical significance of cytoplasmic/nuclear Kaiso in human lung cancer. In this study, immunohistochemical studies were performed on 20 cases of normal lung tissues and 294 cases of non-small cell lung cancer (NSCLC), including 50 cases of paired lymph node metastases and 88 cases with complete follow-up records. Three lung cancer cell lines showing primarily nuclear localization of Kaiso were selected to examine whether roles of Kaiso in cytoplasm and in nucleus are identical. Nuclear Kaiso was down-regulated by shRNA technology or addition a specific Kaiso antibody in these cell lines. The proliferative and invasive abilities were evaluated by MTT and Matrigel invasive assay, transcription of Kaiso's target gene matrilysin was detected by RT-PCR. Kaiso was primarily expressed in the cytoplasm of lung cancer tissues. Overall positive cytoplasmic expression rate was 63.61% (187/294). The positive cytoplasmic expression of Kaiso was higher in advanced TNM stages (III+IV) of NSCLC, compared to lower stages (I+II) (p = 0.019). A correlation between cytoplasmic Kaiso expression and lymph node metastasis was found (p = 0.003). In 50 paired cases, cytoplasmic expression of Kaiso was 78.0% (41/50) in primary sites and 90.0% (45/50) in lymph node metastases (p = 0.001). The lung cancer-related 5-year survival rate was significantly lower in patients who were cytoplasmic Kaiso-positive (22.22%), compared to those with cytoplasmic Kaiso-negative tumors (64.00%) (p = 0.005). Nuclear Kaiso staining was seen in occasional cases with only a 5.10% (15/294) positive rate and was not associated with any clinicopathological features of NSCLC. Furthermore, after the down-regulation of the nuclear

  7. Nuclear proteins hijacked by mammalian cytoplasmic plus strand RNA viruses

    International Nuclear Information System (INIS)

    Lloyd, Richard E.

    2015-01-01

    Plus strand RNA viruses that replicate in the cytoplasm face challenges in supporting the numerous biosynthetic functions required for replication and propagation. Most of these viruses are genetically simple and rely heavily on co-opting cellular proteins, particularly cellular RNA-binding proteins, into new roles for support of virus infection at the level of virus-specific translation, and building RNA replication complexes. In the course of infectious cycles many nuclear-cytoplasmic shuttling proteins of mostly nuclear distribution are detained in the cytoplasm by viruses and re-purposed for their own gain. Many mammalian viruses hijack a common group of the same factors. This review summarizes recent gains in our knowledge of how cytoplasmic RNA viruses use these co-opted host nuclear factors in new functional roles supporting virus translation and virus RNA replication and common themes employed between different virus groups. - Highlights: • Nuclear shuttling host proteins are commonly hijacked by RNA viruses to support replication. • A limited group of ubiquitous RNA binding proteins are commonly hijacked by a broad range of viruses. • Key virus proteins alter roles of RNA binding proteins in different stages of virus replication

  8. Nuclear proteins hijacked by mammalian cytoplasmic plus strand RNA viruses

    Energy Technology Data Exchange (ETDEWEB)

    Lloyd, Richard E., E-mail: rlloyd@bcm.edu

    2015-05-15

    Plus strand RNA viruses that replicate in the cytoplasm face challenges in supporting the numerous biosynthetic functions required for replication and propagation. Most of these viruses are genetically simple and rely heavily on co-opting cellular proteins, particularly cellular RNA-binding proteins, into new roles for support of virus infection at the level of virus-specific translation, and building RNA replication complexes. In the course of infectious cycles many nuclear-cytoplasmic shuttling proteins of mostly nuclear distribution are detained in the cytoplasm by viruses and re-purposed for their own gain. Many mammalian viruses hijack a common group of the same factors. This review summarizes recent gains in our knowledge of how cytoplasmic RNA viruses use these co-opted host nuclear factors in new functional roles supporting virus translation and virus RNA replication and common themes employed between different virus groups. - Highlights: • Nuclear shuttling host proteins are commonly hijacked by RNA viruses to support replication. • A limited group of ubiquitous RNA binding proteins are commonly hijacked by a broad range of viruses. • Key virus proteins alter roles of RNA binding proteins in different stages of virus replication.

  9. Wild Nicotiana Species as a Source of Cytoplasmic Male Sterility in Nicotianatabacum

    Directory of Open Access Journals (Sweden)

    Nikova V

    2014-12-01

    Full Text Available The results of our experiments executed to obtain tobacco male sterile lines through interspecific hybridization are summarized. Ten wild species from the genus Nicotiana: N. excelsior (exc, N. amplexicaulis (amp, N. rustica (rus, Nicotianaglauca (gla, N. velutina (vel, N. benthamiana (ben, N. maritima (mar, N. paniculata (pan, N. longiflora (lon and N. africana (afr were used as cytoplasmic donors and N. tabacum, cv. HarmanliiskaBasma (HB as a donor of the nucleus. Genetic effects of cytoplasmic-nuclear interaction of the studied species are discussed. Our results suggested that cytoplasmic male sterility (CMS was expressed when the cytoplasms of the above mentioned wild Nicotiana species were combined with the nucleus of N. tabacum. The 10 sources of CMS obtained in tobacco were characterized by altered flower phenotypes. Flowers are classified into types according the stamen, pistil and corolla modification. All these CMS sources were backcrossed to Oriental tobaccos, cvs. Tekne, Nevrokop B-12, Kroumovgrad 90 and Djebel 576, to develop corresponding CMS lines. The investigated cytoplasms produced compete male sterility in all those cultivars. The CMS lines preserved flower types, specific for every “sterile” cytoplasm. The extent of male organ modifications varied from apparently normal (but pollenless stamens in CMS (pan, (afr, some plants of (vel (mar through different degrees of malformations (shriveled anther on shortened filaments (lon, pinnate-like anthers on filaments of normal length (amp, petal - (ben, pistil- or stigma-like structures (rus, (gla to lack of male reproductive organs in (exc and in some plants of (vel, (mar, (rus and (gla. Most of the above mentioned cytoplasms had normal female gametophyte and good seed productivity. Alterations of the pistils were observed in CMS (rus, (exc and (ben causing reduction of the seed set. Electrophoresis of seed proteins of the tobacco cultivars and their CMS lines also suggested that

  10. Analysis of Cylindrical Granular Material Silos under Seismic Excitation

    Directory of Open Access Journals (Sweden)

    Christoph Butenweg

    2017-07-01

    Full Text Available Silos generally work as storage structures between supply and demand for various goods, and their structural safety has long been of interest to the civil engineering profession. This is especially true for dynamically loaded silos, e.g., in case of seismic excitation. Particularly thin-walled cylindrical silos are highly vulnerable to seismic induced pressures, which can cause critical buckling phenomena of the silo shell. The analysis of silos can be carried out in two different ways. In the first, the seismic loading is modeled through statically equivalent loads acting on the shell. Alternatively, a time history analysis might be carried out, in which nonlinear phenomena due to the filling as well as the interaction between the shell and the granular material are taken into account. The paper presents a comparison of these approaches. The model used for the nonlinear time history analysis considers the granular material by means of the intergranular strain approach for hypoplasticity theory. The interaction effects between the granular material and the shell is represented by contact elements. Additionally, soil–structure interaction effects are taken into account.

  11. Localization and function of KLF4 in cytoplasm of vascular smooth muscle cell

    International Nuclear Information System (INIS)

    Liu, Yan; Zheng, Bin; Zhang, Xin-hua; Nie, Chan-juan; Li, Yong-hui; Wen, Jin-kun

    2013-01-01

    Highlights: •PDGF-BB prompts the translocation of KLF4 to the cytoplasm. •PDGF-BB promotes interaction between KLF4 and actin in the cytoplasm. •Phosphorylation and SUMOylation of KLF4 participates in regulation of cytoskeletal organization. •KLF4 regulates cytoskeleton by promoting the expression of contraction-associated genes. -- Abstract: The Krüppel-like factor 4 is a DNA-binding transcriptional regulator that regulates a diverse array of cellular processes, including development, differentiation, proliferation, and apoptosis. The previous studies about KLF4 functions mainly focused on its role as a transcription factor, its functions in the cytoplasm are still unknown. In this study, we found that PDGF-BB could prompt the translocation of KLF4 to the cytoplasm through CRM1-mediated nuclear export pathway in vascular smooth muscle cells (VSMCs) and increased the interaction of KLF4 with actin in the cytoplasm. Further study showed that both KLF4 phosphorylation and SUMOylation induced by PDGF-BB participates in regulation of cytoskeletal organization by stabilizing the actin cytoskeleton in VSMCs. In conclusion, these results identify that KLF4 participates in the cytoskeletal organization by stabilizing cytoskeleton in the cytoplasm of VSMCs

  12. Localization and function of KLF4 in cytoplasm of vascular smooth muscle cell

    Energy Technology Data Exchange (ETDEWEB)

    Liu, Yan [Department of Biochemistry and Molecular Biology, The Key Laboratory of Neurobiology and Vascular Biology (China); The Third Hospital of Hebei Medical University, Shijazhuang (China); Zheng, Bin; Zhang, Xin-hua; Nie, Chan-juan; Li, Yong-hui [Department of Biochemistry and Molecular Biology, The Key Laboratory of Neurobiology and Vascular Biology (China); Wen, Jin-kun, E-mail: wjk@hebmu.edu.cn [Department of Biochemistry and Molecular Biology, The Key Laboratory of Neurobiology and Vascular Biology (China)

    2013-06-28

    Highlights: •PDGF-BB prompts the translocation of KLF4 to the cytoplasm. •PDGF-BB promotes interaction between KLF4 and actin in the cytoplasm. •Phosphorylation and SUMOylation of KLF4 participates in regulation of cytoskeletal organization. •KLF4 regulates cytoskeleton by promoting the expression of contraction-associated genes. -- Abstract: The Krüppel-like factor 4 is a DNA-binding transcriptional regulator that regulates a diverse array of cellular processes, including development, differentiation, proliferation, and apoptosis. The previous studies about KLF4 functions mainly focused on its role as a transcription factor, its functions in the cytoplasm are still unknown. In this study, we found that PDGF-BB could prompt the translocation of KLF4 to the cytoplasm through CRM1-mediated nuclear export pathway in vascular smooth muscle cells (VSMCs) and increased the interaction of KLF4 with actin in the cytoplasm. Further study showed that both KLF4 phosphorylation and SUMOylation induced by PDGF-BB participates in regulation of cytoskeletal organization by stabilizing the actin cytoskeleton in VSMCs. In conclusion, these results identify that KLF4 participates in the cytoskeletal organization by stabilizing cytoskeleton in the cytoplasm of VSMCs.

  13. Dynamical Heterogeneity in Granular Fluids and Structural Glasses

    Science.gov (United States)

    Avila, Karina E.

    Our current understanding of the dynamics of supercooled liquids and other similar slowly evolving (glassy) systems is rather limited. One aspect that is particularly poorly understood is the origin and behavior of the strong non trivial fluctuations that appear in the relaxation process toward equilibrium. Glassy systems and granular systems both present regions of particles moving cooperatively and at different rates from other regions. This phenomenon is known as spatially heterogeneous dynamics. A detailed explanation of this phenomenon may lead to a better understanding of the slow relaxation process, and perhaps it could even help to explain the presence of the glass transition. This dissertation concentrates on studying dynamical heterogeneity by analyzing simulation data for models of granular materials and structural glasses. For dissipative granular fluids, the growing behavior of dynamical heterogeneities is studied for different densities and different degrees of inelasticity in the particle collisions. The correlated regions are found to grow rapidly as the system approaches dynamical arrest. Their geometry is conserved even when probing at different cutoff length in the correlation function or when the energy dissipation in the system is increased. For structural glasses, I test a theoretical framework that models dynamical heterogeneity as originated in the presence of Goldstone modes, which emerge from a broken continuous time reparametrization symmetry. This analysis is based on quantifying the size and the spatial correlations of fluctuations in the time variable and of other kinds of fluctuations. The results obtained here agree with the predictions of the hypothesis. In particular, the fluctuations associated to the time reparametrization invariance become stronger for low temperatures, long timescales, and large coarse graining lengths. Overall, this research points to dynamical heterogeneity to be described for granular systems similarly than

  14. Whole-genome sequencing of a malignant granular cell tumor with metabolic response to pazopanib

    Science.gov (United States)

    Wei, Lei; Liu, Song; Conroy, Jeffrey; Wang, Jianmin; Papanicolau-Sengos, Antonios; Glenn, Sean T.; Murakami, Mitsuko; Liu, Lu; Hu, Qiang; Conroy, Jacob; Miles, Kiersten Marie; Nowak, David E.; Liu, Biao; Qin, Maochun; Bshara, Wiam; Omilian, Angela R.; Head, Karen; Bianchi, Michael; Burgher, Blake; Darlak, Christopher; Kane, John; Merzianu, Mihai; Cheney, Richard; Fabiano, Andrew; Salerno, Kilian; Talati, Chetasi; Khushalani, Nikhil I.; Trump, Donald L.; Johnson, Candace S.; Morrison, Carl D.

    2015-01-01

    Granular cell tumors are an uncommon soft tissue neoplasm. Malignant granular cell tumors comprise T transitions, particularly when immediately preceded by a 5′ G. A loss-of-function mutation was detected in a newly recognized tumor suppressor candidate, BRD7. No mutations were found in known targets of pazopanib. However, we identified a receptor tyrosine kinase pathway mutation in GFRA2 that warrants further evaluation. To the best of our knowledge, this is only the second reported case of a malignant granular cell tumor exhibiting a response to pazopanib, and the first whole-genome sequencing of this uncommon tumor type. The findings provide insight into the genetic basis of malignant granular cell tumors and identify potential targets for further investigation. PMID:27148567

  15. Large granular lymphocytic leukaemia complicated with histiocytic sarcoma in a dog : clinical communication

    Directory of Open Access Journals (Sweden)

    T. Maruo

    2009-05-01

    Full Text Available A 10-year-old castrated male Golden retriever, weighing 36.3 kg was referred for evaluation owing to a decline in general condition. Findings from the complete blood count revealed a marked lymphocytosis (113 000/µℓ. Examination of Wright-Giemsa-stained films of peripheral blood revealed the presence of large granular lymphocytes (LGL. Seventy-two per cent (81 360/µℓ of the lymphocytes were found to be 12-17 µm in diameter, containing nuclei with mature clumped chromatin and abundant lightly basophilic cytoplasm with a variable number of fine azurophilic granules. Based on these findings this case was diagnosed as LGL leukaemia. As a result of multiple-agent chemotherapy, the markedly elevated levels of lymphocytes gradually decreased to 7500/µℓ on day 122 and the patient maintained a good quality of life for the following 3 months. However, on around day 237, a soft, raised, bosselated mass on the labial region was noted. The dog was diagnosed as having histiocytic sarcoma based on cytological and histological examination of the mass. Shortly after diagnosis, the dog developed sudden onset of central nervous system signs and died on day 270. A common outcome of canine LGL is the development of acute blast crisis or lymphoma. However, this case was notable for complication with histiocytic sarcoma from another origin.

  16. The critical current of granular superconductor

    International Nuclear Information System (INIS)

    Ignat'ev, V.K.

    1998-01-01

    A mechanism of hyper vortex pinning in granular superconductors is proposed to describe the field dependence of the critical current density and pinning potential. The results are in a good agreement with the experiment. The model represents the peak effect and the percolation mechanism of conductivity in ceramic superconductors

  17. Poliovirus infection induces the co-localization of cellular protein SRp20 with TIA-1, a cytoplasmic stress granule protein.

    Science.gov (United States)

    Fitzgerald, Kerry D; Semler, Bert L

    2013-09-01

    Different types of environmental stress cause mammalian cells to form cytoplasmic foci, termed stress granules, which contain mRNPs that are translationally silenced. These foci are transient and dynamic, and contain components of the cellular translation machinery as well as certain mRNAs and RNA binding proteins. Stress granules are known to be induced by conditions such as hypoxia, nutrient deprivation, and oxidative stress, and a number of cellular factors have been identified that are commonly associated with these foci. More recently it was discovered that poliovirus infection also induces the formation of stress granules, although these cytoplasmic foci appear to be somewhat compositionally unique. Work described here examined the punctate pattern of SRp20 (a host cell mRNA splicing protein) localization in the cytoplasm of poliovirus-infected cells, demonstrating the partial co-localization of SRp20 with the stress granule marker protein TIA-1. We determined that SRp20 does not co-localize with TIA-1, however, under conditions of oxidative stress, indicating that the close association of these two proteins during poliovirus infection is not representative of a general response to cellular stress. We confirmed that the expression of a dominant negative version of TIA-1 (TIA-1-PRD) results in the dissociation of stress granules. Finally, we demonstrated that expression of wild type TIA-1 or dominant negative TIA-1-PRD in cells during poliovirus infection does not dramatically affect viral translation. Taken together, these studies provide a new example of the unique cytoplasmic foci that form during poliovirus infection. Copyright © 2013 Elsevier B.V. All rights reserved.

  18. Poliovirus infection induces the co-localization of cellular protein SRp20 with TIA-1, a cytoplasmic stress granule protein

    Science.gov (United States)

    Fitzgerald, Kerry D.; Semler, Bert L.

    2013-01-01

    Different types of environmental stress cause mammalian cells to form cytoplasmic foci, termed stress granules, which contain mRNPs that are translationally silenced. These foci are transient and dynamic, and contain components of the cellular translation machinery as well as certain mRNAs and RNA binding proteins. Stress granules are known to be induced by conditions such as hypoxia, nutrient deprivation, and oxidative stress, and a number of cellular factors have been identified that are commonly associated with these foci. More recently it was discovered that poliovirus infection also induces the formation of stress granules, although these cytoplasmic foci appear to be somewhat compositionally unique. Work described here examined the punctate pattern of SRp20 (a host cell mRNA splicing protein) localization in the cytoplasm of poliovirus-infected cells, demonstrating the partial co-localization of SRp20 with the stress granule marker protein TIA-1. We determined that SRp20 does not co-localize with TIA-1, however, under conditions of oxidative stress, indicating that the close association of these two proteins during poliovirus infection is not representative of a general response to cellular stress. We confirmed that the expression of a dominant negative version of TIA-1 (TIA-1-PRD) results in the dissociation of stress granules. Finally, we demonstrated that expression of wild type TIA-1 or dominant negative TIA-1-PRD in cells during poliovirus infection does not dramatically affect viral translation. Taken together, these studies provide a new example of the unique cytoplasmic foci that form during poliovirus infection. PMID:23830997

  19. Tumor de células granulares bifocal em mucosa jugal

    Directory of Open Access Journals (Sweden)

    Victor Yuri Nicolau Ferreira

    Full Text Available O tumor de células granulares é uma lesão incomum que apresenta predileção pela cavidade oral, por apresentar baixa taxa de recidiva, o tratamento de escolha é a excisão cirúrgica simples. O objetivo caracterizar um caso de tumor de células granulares bifocal em mucosa jugal e explanar características clínicas e histopatológicas acerca da lesão. Relata-se o caso de uma paciente de 60 anos apresentando dois pequenos nódulos de superfície lisa em mucosa jugal, consistência fibroelástica e coloração levemente amarelada. Foi realizada a excisão cirúrgica das duas lesões a partir de uma biópsia excisional, onde microscopicamente foi observada uma neoplasia de células granulares arranjadas em ilhas, chegando ao diagnóstico de Tumor de células granulares. O diagnóstico final da lesão foi obtido a partir do exame histopatológico, visto que, a aparência clínica da lesão é inespecífica, sendo de extrema importância a realização da biópsia excisional. A paciente continua em acompanhamento há 6 meses e não demonstra recidiva da lesão.

  20. Universal scaling of permeability through the granular-to-continuum transition

    Science.gov (United States)

    Wadsworth, F. B.; Scheu, B.; Heap, M. J.; Kendrick, J. E.; Vasseur, J.; Lavallée, Y.; Dingwell, D. B.

    2015-12-01

    Magmas fragment forming a transiently granular material, which can weld back to a fluid-continuum. This process results in dramatic changes in the gas-volume fraction of the material, which impacts the gas permeability. We collate published data for the gas-volume fraction and permeability of volcanic and synthetic materials which have undergone this process to different amounts and note that in all cases there exists a discontinuity in the relationship between these two properties. By discriminating data for which good microstructural information are provided, we use simple scaling arguments to collapse the data in both the still-granular, high gas-volume fraction regime and the fluid-continuum low gas-volume fraction regime such that a universal description can be achieved. We use this to argue for the microstructural meaning of the well-described discontinuity between gas-permeability and gas-volume fraction and to infer the controls on the position of this transition between dominantly granular and dominantly fluid-continuum material descriptions. As a specific application, we consider the transiently granular magma transported through and deposited in fractures in more-coherent magmas, thought to be a primary degassing pathway in high viscosity systems. We propose that our scaling coupled with constitutive laws for densification can provide insights into the longevity of such degassing channels, informing sub-surface pressure modelling at such volcanoes.

  1. Changes in protein metabolism after irradiation. Pt. 1. Protease activity, protease pattern, protein and free amino acids in cytoplasm and cell organelles of the rat spleen after 600 R whole body x irradiation

    Energy Technology Data Exchange (ETDEWEB)

    Valet, G [Max-Planck-Institut fuer Biochemie, Muenchen (F.R. Germany). Abt. fuer Experimentelle Medizin

    1975-12-01

    The protease activity of cytoplasm and cell organelles of the rat spleen against spleen protein and hemoglobin as a substrate increases during a initial reaction phase of the organism on the first day after 600 R whole body X-irradiation. The alkaline protease in the cytoplasm and the acid protease in the cell organelles increase, whereas the protease activity against externally added hemoglobin as substrate decreases below the initial values. The protein, the protease activity and the free amino acids of the cytoplasm and the cell organelles decrease during the disease phase on day 3 and 4 after irradiation. The protein loss of the spleen is therefore not explained by an increased protease activity. Acid proteases appear in the cytoplasm which derive probably from the cell organelles. The protease activity and the free amino acids are increased in the cytoplasm and the cell organelles during the regeneration phase of the organism between day 15 and 18 after irradiation.

  2. Resistance capability of microaerobic granular sludge for ...

    African Journals Online (AJOL)

    enoh

    2012-02-08

    Feb 8, 2012 ... The resistance capability to pH shock of microaerobic granular sludge for pentachlorophenol (PCP) ... process with chlorine gas in pulp and paper, leather and spinning ... nitrifying bacteria in the aerobic zone, and then trans-.

  3. Removal of organochlorine pesticides from water using virgin and regenerated granular activated carbon

    Directory of Open Access Journals (Sweden)

    MIRJANA B. NINKOVIĆ

    2010-04-01

    Full Text Available Public water systems use granular activated carbon in order to eliminate pesticides. After saturation, the used activated carbon is regenerated and reused in order to reduce the costs of water production and minimize waste. In this study, the adsorption of 10 different chlorinated pesticides from water using columns packed with commercial virgin and regenerated granular activated carbon was simulated in order to compare their adsorption capacities for different chlorinated pesticides. The breakthrough curves showed that chlorinated pesticides from the group of hexachlorocyclohexane (HCH were poorly adsorbed, followed by cyclodiens as averagely adsorbed and the derivatives of halogenated aromatic hydrocarbons (DDT as strongly adsorbed. However, the adsorption capacity of regenerated granular activated carbon was considerably lower for tested pesticides compared to the virgin granular carbon. In addition, rinsing of the pesticides after the saturation point is a far more efficient process on regenerated carbon.

  4. Experimental and numerical study of granular flow characteristics of absorber sphere pneumatic conveying process

    International Nuclear Information System (INIS)

    Zhang He; Li Tianjin; Qi Weiwei; Huang Zhiyong; Bo Hanliang

    2014-01-01

    Absorber sphere pneumatic conveying system is the main part of absorber sphere shutdown system and closely related to granular flow. Granular flow characteristics, such as mass flow rate, angle of repose, contact forces, etc., are crucial important for the optimization of absorber sphere pneumatic conveying process. Mass flow rate of granular flow through the sphere discharge valve and the bend tube are significant for the time of ball dropping and the time of conveying back rate, respectively. Experiments and DEM simulations have been conducted to investigate the granular flow characteristics. Experimental results showed that the relation between average mass flow rate through the sphere discharge valve and the valve stroke was composed of three zones i. e. the idle stroke zone, linearly zone and orifice restriction zone. The Beverloo's law was suitable for the granular flow through the multi-orifice during the orifice restriction zone. The variation of average mass flow rate with the valve stroke could be described by modified Beverloo's law based on the valve stroke. DEM simulation results showed that the drained angle of repose remained 23° at different valve strokes. Mass flow rate during steady granular flow through the sphere discharge valve at different valve strokes kept stable. The variation of mass flow rate through a bend tube was different from that through a circular orifice. (author)

  5. Granular flow through an aperture: influence of the packing fraction

    OpenAIRE

    Alejandra Aguirre , Maria; De Schant , Rosario; Géminard , Jean-Christophe

    2014-01-01

    For the last 50 years, the flow of a granular material through an aperture has been intensely studied in gravity-driven vertical systems (e.g. silos and hoppers). Nevertheless, in many industrial applications, grains are horizontally transported at constant velocity, lying on conveyor belts or floating on the surface of flowing liquids. Unlike fluid flows, that are controlled by the pressure, granular flow is not sensitive to the local pressure but rather to the local velocity of the grains a...

  6. Voltage fluctuations in granular superconductors in the perpendicular configuration

    International Nuclear Information System (INIS)

    Gerashchenko, O V

    2003-01-01

    The spectral density of voltage fluctuations in granular YBa 2 Cu 3 O 7-δ superconductors in the perpendicular configuration has been studied in the flux flow mode. It has been found that, in this case, the 1/f-voltage noise observed depends weakly on temperature and is associated with motion of a magnetic flux in the superconductor. A comparison of the data obtained with the results of previous measurements in parallel configuration has shown that voltage noise is produced by a single common source, which is presumably associated with self-organization of the critical state in granular superconductors

  7. Segregation of granular binary mixtures by a ratchet mechanism.

    Science.gov (United States)

    Farkas, Zénó; Szalai, Ferenc; Wolf, Dietrich E; Vicsek, Tamás

    2002-02-01

    We report on a segregation scheme for granular binary mixtures, where the segregation is performed by a ratchet mechanism realized by a vertically shaken asymmetric sawtooth-shaped base in a quasi-two-dimensional box. We have studied this system by computer simulations and found that most binary mixtures can be segregated using an appropriately chosen ratchet, even when the particles in the two components have the same size and differ only in their normal restitution coefficient or friction coefficient. These results suggest that the components of otherwise nonsegregating granular mixtures may be separated using our method.

  8. Permeability of granular beds emplaced in vertical drill holes

    International Nuclear Information System (INIS)

    Griffiths, S.K.; Morrison, F.A. Jr.

    1979-01-01

    To determine the permeabilities of granular materials emplaced in vertical drill holes used for underground nuclear tests, an experiment at the USDOE Nevada Test Site (NTS) was conducted. As the hole is being filled, falling material increases pressure above and within the granular beds beneath. When the filling operation starts or stops, a transient pressure response occurs within the beds; measurements of this response in beds of various compositions were made. The permeabilities after emplacement were found by matching analytical predictions of the response to these data. This information is useful in assuring the containment of nuclear tests conducted in such drill holes

  9. Statistical and visual probing of evolving granular assemblies

    International Nuclear Information System (INIS)

    Smith, Laurence M.

    2002-01-01

    The majority of processes in the chemical and allied industries involve the storage and conveyancing of granular material, the physics of which is still not particularly well understood. Whilst some non-invasive techniques have been developed, much experimental work unfortunately interferes with the fields being investigated. For this reason and in conjunction with increasing computing power, there has been an increase in simulation based studies. Granular dynamics simulations, being based upon inter-particle interaction laws, give the potential to investigate assemblies at the 'micro-level' and have been successful in modelling process conditions in a number of granular flow situations. To date, most analyses of these simulations are essentially static in nature involving 'time snapshots'. However, in a granular dynamics simulation there is a wealth of data available on a time referenced basis which has the potential to allow a quantitative analysis of the dynamics of assembly evolution. This dissertation describes the development and application of a toolkit for post-simulation analysis. However, the utilities within the toolkit would be equally applicable to large experimental data sets should such data sets exist. The application of the toolset focuses largely on the dynamics of heap evolution in both 2D and 3D with some supportive 3D work on hopper discharge. A major part of the work involves the application of time series techniques (including the wavelet transform) in the context of variable coupling during avalanching. Segregation by self-diffusion receives particular attention and a new mechanism is proposed by which segregation by particle size takes place in the boundary layer of a low impact feed heap displaying a clear velocity gradient during discrete avalanching. Periodic lateral surging is shown to enforce mixing for a high impact feed, a phenomenon which appears to switch off below a certain feed impact. Segregation by self-diffusion is also shown

  10. Effect of powder sample granularity on fluorescent intensity and on thermal parameters in x-ray diffraction Rietveld analysis

    International Nuclear Information System (INIS)

    Sparks, C.J.; Specht, E.D.; Ice, G.E.; Kumar, R.; Zschack, P.; Shiraishi, T.; Hisatsune, K.

    1991-01-01

    The effect of sample granularity on diffracted x-ray intensity was evaluated by measuring the 2θ dependence of x-ray fluorescence from various samples. Measurements were made in the symmetric geometry on samples ranging from single crystals to highly absorbing coarse powders. A characteristic shape for the absorption correction was observed. A demonstration of the sensitivity of Rietveld refined site occupation parameters is made on CuAu and Cu 50 Au 44 Ni 6 alloys refined with and without granularity corrections. These alloys provide a good example of the effect of granularity due to their large linear x-ray absorption coefficients. Sample granularity and refined thermal parameters obtained from the Rietveld analysis were found to be correlated. Without a granularity correction, the refined thermal parameters are too low and can actually become negative in an attempt to compensate for granularity. A general shape for granularity correction can be included in refinement procedures. If no granularity correction is included, data should be restricted to above 30 degrees 2θ, and thermal parameters should be ignored unless extreme precautions are taken to produce >5 μm particles and high packing densities

  11. Paediatric laryngeal granular cell tumour

    Directory of Open Access Journals (Sweden)

    Dauda Ayuba

    2009-01-01

    Full Text Available Granular cell tumour (GCT affecting the larynx is not common, especially in children. Most cases are apt to be confused with respiratory papilloma and may even be mistaken for a malignant neoplasia. We present a case of laryngeal GCT in a 12-year-old child to emphasize that the tumour should be regarded in the differential of growths affecting the larynx in children.

  12. The Effect of Rotational Speed on Granular Flow in a Vertical Bladed Mixer

    Czech Academy of Sciences Publication Activity Database

    Havlica, Jaromír; Jirounková, K.; Trávníčková, Tereza; Kohout, M.

    2015-01-01

    Roč. 280, AUG (2015), s. 180-190 ISSN 0032-5910 R&D Projects: GA ČR(CZ) GAP105/12/0664 Institutional support: RVO:67985858 Keywords : DEM * granular mixing * granular dynamics Subject RIV: CI - Industrial Chemistry, Chemical Engineering Impact factor: 2.759, year: 2015

  13. Sorption of cobalt and nickel on anaerobic granular sludges: isotherms and sequential extraction

    NARCIS (Netherlands)

    Hullebusch, van E.D.; Peerbolte, A.; Zandvoort, M.H.; Lens, P.N.L.

    2005-01-01

    The objective of this study was to investigate the sorption capacity and the fractionation of sorbed nickel and cobalt onto anaerobic granular sludges. Two different anaerobic granular sludges (non-fed, pH = 7) were loaded with nickel and cobalt in. adsorption experiments (monometal and competitive

  14. Granularity controlled irradiation response of cuprate superconductors

    International Nuclear Information System (INIS)

    Mishra, N.C.; Behera, D.; Mohanty, T.; Mohanta, D.; Kanjilal, D.; Mehta, G.K.; Pinto, R.

    1999-01-01

    Confining to an energy range where ions can neither create defects through elastic energy loss nor they can create defects through latent track formation, we study the effect of 140 MeV Si-ion irradiation in YBa 2 Cu 3 O 7-x (YBCO). We show that the evolution of superconducting and normal state properties in such situation is largely governed by the initial defects structure, particularly the grain boundary characteristics of the YBCO system. Both intra- and inter-granular defect structure in films of two batches were made widely different by having Ag as composite and substituent in one and by aging the other prior to irradiation. Evolution of the resistivity vs temperature characteristics in these films with ion fluence reveals the importance of Ag in bringing about both inter- and intra-granular modifications and making the films insensitive to ion irradiation

  15. Transport and fluctuations in granular fluids from Boltzmann equation to hydrodynamics, diffusion and motor effects

    CERN Document Server

    Puglisi, Andrea

    2015-01-01

    This brief offers a concise presentation of granular fluids from the  point of view of non-equilibrium statistical physics. The emphasis is on fluctuations, which can be large in granular fluids due to the small system size (the number of grains is many orders of magnitude smaller than in molecular fluids). Firstly, readers will be introduced to the most intriguing experiments on fluidized granular fluids. Then granular fluid theory, which goes through increasing levels of coarse-graining and emerging collective phenomena, is described. Problems and questions are initially posed at the level of kinetic theory, which describes particle densities in full or reduced phase-space. Some answers become clear through hydrodynamics, which describes the evolution of slowly evolving fields. Granular fluctuating hydrodynamics, which builds a bridge to the most recent results in non-equilibrium statistical mechanics, is also introduced. Further and more interesting answers come when the dynamics of a massive intruder are...

  16. NMR studies of granular media and two-phase flow in porous media

    Science.gov (United States)

    Yang, Xiaoyu

    This dissertation describes two experimental studies of a vibrofluidized granular medium and a preliminary study of two-phase fluid flow in a porous medium using Nuclear Magnetic Resonance (NMR). The first study of granular medium is to test a scaling law of the rise in center of mass in a three-dimensional vibrofluidized granular system. Our granular system consisted of mustard seeds vibrated vertically at 40 Hz from 0g to 14g. We used Magnetic Resonance Imaging (MRI) to measure density profile in vibrated direction. We observed that the rise in center of mass scaled as nu 0alpha/Nlbeta with alpha = 1.0 +/- 0.2 and beta = 0.5 +/- 0.1, where nu 0 is the vibration velocity and Nl is the number of layers of grains in the container. A simple theory was proposed to explain the scaling exponents. In the second study we measured both density and velocity information in the same setup of the first study. Pulsed Field Gradient (PFG)-NMR combined with MRI was used to do this measurement. The granular system was fully fluidized at 14.85g 50 Hz with Nl ≤ 4. The velocity distributions at horizontal and vertical direction at different height were measured. The distributions were nearly-Gaussian far from sample bottom and non-Gaussian near sample bottom. Granular temperature profiles were calculated from the velocity distributions. The density and temperature profile were fit to a hydrodynamic theory. The theory agreed with experiments very well. A temperature inversion near top was also observed and explained by additional transport coefficient from granular hydrodynamics. The third study was the preliminary density measurement of invading phase profile in a two-phase flow in porous media. The purpose of this study was to test an invasion percolation with gradient (IPG) theory in two-phase flow of porous media. Two phases are dodecane and water doped with CuSO4. The porous medium was packed glass beads. The front tail width sigma and front width of invading phase were

  17. Analytical and Computational Modeling of Mechanical Waves in Microscale Granular Crystals: Nonlinearity and Rotational Dynamics

    Science.gov (United States)

    Wallen, Samuel P.

    Granular media are one of the most common, yet least understood forms of matter on earth. The difficulties in understanding the physics of granular media stem from the fact that they are typically heterogeneous and highly disordered, and the grains interact via nonlinear contact forces. Historically, one approach to reducing these complexities and gaining new insight has been the study of granular crystals, which are ordered arrays of similarly-shaped particles (typically spheres) in Hertzian contact. Using this setting, past works explored the rich nonlinear dynamics stemming from contact forces, and proposed avenues where such granular crystals could form designer, dynamically responsive materials, which yield beneficial functionality in dynamic regimes. In recent years, the combination of self-assembly fabrication methods and laser ultrasonic experimental characterization have enabled the study of granular crystals at microscale. While our intuition may suggest that these microscale granular crystals are simply scaled-down versions of their macroscale counterparts, in fact, the relevant physics change drastically; for example, short-range adhesive forces between particles, which are negligible at macroscale, are several orders of magnitude stronger than gravity at microscale. In this thesis, we present recent advances in analytical and computational modeling of microscale granular crystals, in particular concerning the interplay of nonlinearity, shear interactions, and particle rotations, which have previously been either absent, or included separately at macroscale. Drawing inspiration from past works on phononic crystals and nonlinear lattices, we explore problems involving locally-resonant metamaterials, nonlinear localized modes, amplitude-dependent energy partition, and other rich dynamical phenomena. This work enhances our understanding of microscale granular media, which may find applicability in fields such as ultrasonic wave tailoring, signal processing

  18. [Neuroendocrine carcinoma of the urinary bladder. A case report].

    Science.gov (United States)

    Aragón-Tovar, Anel Rogelio; Pineda-Rodríguez, Marco Elí; Puente-Gallegos, Francisco Edgardo; Zavala-Pompa, Angel

    2014-01-01

    Small cell carcinoma of the urinary bladder is an infrequent lesion. We present the case of a 68-year-old male who arrived at the emergency room with a history of 24-h gross hematuria. Imaging studies show a urinary bladder tumor with a 218 cc volume that during a 20-day period increased to 426 cc. Histopathological images with hematoxylin-eosin show an infiltrating solid mass with uneven borders. It is composed of neoplastic cells with evident nuclei predominance and scant cytoplasm (small cells). Chromogranin immunohistochemical staining shows a diffusely positive cytoplasmic granular pattern on neoplastic cells. High molecular weight cytokeratin staining shows a negative pattern on neoplastic cells along with a positive pattern on reporsurrounding normal urothelium. Tumoral mass is positive for synaptophysin and CD-56 and negative for CK-7 and CK-20. Patient therapy was based on radiation plus chemotherapy. Small cell carcinoma of the urinary bladder represents 0.35-0.70% of urinary bladder tumors. Histological and immunohistochemical identification are key elements in the diagnosis. Treatment approach is based on cisplatin-based chemotherapy plus radical cystectomy, except when metastatic disease is present.

  19. Development of mixed microbial granular biofilms for denitrification of concentrated wastes

    International Nuclear Information System (INIS)

    Krishna Mohan, T.V.; Nancharaiah, Y.V.; Venugopalan, V.P.; Narasimhan, S.V.; Satyasai, P.M.

    2010-01-01

    Nitrate containing wastes are generated at various stages of the nuclear fuel cycle; fuel fabrication and reprocessing. A treatment process for removing nitrate from such concentrated nitrate bearing effluents is needed. Among other available options, biological denitrification is an economical and technically feasible method for nitrate removal. Granular biofilm based sequencing batch reactors (SBRs) may allow designing a compact and high rate processes suitable for the treatment of concentrated effluents. Hence, experiments were carried out in laboratory scale sequencing batch reactors (SBRs) to develop granular biofilms (composed of mixed microbes) for removing nitrate from the concentrated nitrate containing-media. Microbial granular biofilms, capable of consuming nitrate up to 2710 mg/l nitrate-N, were developed under anaerobic conditions in a 6-litre volume sequencing batch reactor (SBR). The SBR was inoculated with activated sludge flocs and operated with 24-h cycle and 50% volumetric exchange ratio. Synthetic media containing acetate as the energy source and electron donor, at carbon to nitrogen molar ratio of 2:1 and 3:1 was fed into the SBRs. Nitrate-N concentration in the SBR was increased in a step-wise manner starting from 677 to 2710 mg/l (1355 to 5420 mg/l in the feed). Complete removal of influent nitrate occurred within the first few hours of SBR cycle period. Effluent nitrate and nitrite levels (∼3 mg/l nitrate-N or nitrite-N) at the end of SBR cycle period (24 h) were found to be below the discharge limits. Under these conditions biomass predominantly consisted of granular biofilms. Results show the potential of granular biofilm based SBR for converting nitrate to nitrogen gas from concentrated nitrate bearing industrial effluents. (author)

  20. Experiments and characterization of low-frequency oscillations in a granular column

    Science.gov (United States)

    Oyarte Gálvez, Loreto; Rivas, Nicolás; van der Meer, Devaraj

    2018-04-01

    The behavior of a vertically vibrated granular bed is reminiscent of a liquid in that it exhibits many phenomena such as convection and Faraday-like surface waves. However, when the lateral dimensions of the bed are confined such that a quasi-one-dimensional geometry is formed, the only phenomena that remain are bouncing bed and the granular Leidenfrost effect. This permits the observation of the granular Leidenfrost state for a wide range of energy injection parameters and more specifically allows for a thorough characterization of the low-frequency oscillation (LFO) that is present in this state. In both experiments and particle simulations we determine the LFO frequency from the power spectral density of the center-of-mass signal of the grains, varying the amplitude and frequency of the driving, the particle diameter, and the number of layers in the system. We thus find that the LFO frequency (i) is inversely proportional to the fast inertial timescale and (ii) decorrelates with a typical decay time proportional to the slow dissipative timescale in the system. The latter is consistent with the view that the LFO is driven by the inherent noise that is present in the granular Leidenfrost state with a low number of particles.

  1. A review on numerical models for granular flow inside hoppers and its applications in PBR

    International Nuclear Information System (INIS)

    Tang Yushi; Guo Qiuju; Zhang Liguo

    2015-01-01

    Granular flow is the shearing motion of a collection of discrete solid particles which are commonly seen and widely utilized in various industrial applications. One of the essential applications of dense slow granular flow in engineering is the pebble flow in pebble-bed nuclear reactor (PBR). A number of numerical models have been established for researching the basic physical mechanisms and properties of granular flow. For the purpose of generating an appropriate model for high temperature reactor-pebblebed modules (HTR-PM) in the future, numerical models on granular flow in hoppers and some of their previous applications on PBRs are reviewed. In this paper, basic transport and contact mechanisms of granular flow are firstly introduced, then kinetic theory from gas molecules and plastic theory from metal mechanics approaches give descriptions of the macroscopic behavior of rapid flow and quasistatic flow regimes, respectively, subsequently kinematic continuum method and discrete element method (DEM) are presented to describe the bulk features of dense slow flow in hoppers. Since various kinematic models, DEM models and their modified versions for dense slow granular flow in hoppers have been experimentally verified and applied in prediction of pebble flow in PBRs, a promising model for HTR-PM is expected with further work to generate pebble flow profile in the future. (author)

  2. Suitability of granular carbon as an anode material for sediment microbial fuel cells

    Energy Technology Data Exchange (ETDEWEB)

    Arends, Jan B.A.; Blondeel, Evelyne; Boon, Nico; Verstraete, Willy [Ghent Univ. (Belgium). Faculty of Bioscience Engineering; Tennison, Steve R. [Mast Carbon International Ltd., Basingstoke, Hampshire (United Kingdom)

    2012-08-15

    Purpose: Sediment microbial fuel cells (S-MFCs) are bio-electrochemical devices that are able to oxidize organic matter directly into harvestable electrical power. The flux of organic matter into the sediment is rather low; therefore, other researchers have introduced plants for a continuous supply of organic matter to the anode electrode. Until now only interconnected materials have been considered as anode materials in S-MFCs. Here, granular carbon materials were investigated for their suitability as an anode material in S-MFCs. Materials and methods: Laboratory microcosms with eight different electrode materials (granules, felts and cloths) were examined with controlled organic matter addition under brackish conditions. Current density, organic matter removal and microbial community composition were monitored using 16S rRNA gene PCR followed by denaturing gradient gel electrophoresis (DGGE). The main parameters investigated were the influence of the amount of electrode material applied to the sediment, the size of the granular material and the electrode configuration. Results and discussion: Felt material had an overall superior performance in terms of current density per amount of applied electrode material; felt and granular anode obtained similar current densities (approx. 50-60 mA m{sup -2}), but felt materials required 29 % less material to be applied. Yet, when growing plants, granular carbon is more suited because it is considered to restore, upon disturbance, the electrical connectivity within the anode compartment. Small granules (0.25-0.5 mm) gave the highest current density compared to larger granules (1-5 mm) of the same material. Granules with a rough surface had a better performance compared to smooth granules of the same size. The different granular materials lead to a selection of distinct microbial communities for each material, as shown by DGGE. Conclusions: Granular carbon is suitable as an anode material for S-MFCs. This opens the possibility

  3. Cytoplasmic lipid bodies of human neutrophilic leukocytes

    International Nuclear Information System (INIS)

    Weller, P.F.; Ackerman, S.J.; Nicholson-Weller, A.; Dvorak, A.M.

    1989-01-01

    The morphology and function of cytoplasmic lipid bodies in human neutrophils were evaluated. By transmission electron microscopy, neutrophil lipid bodies were cytoplasmic inclusions, usually several microns in diameter, that occasionally coalesced to attain a diameter up to 7 microM. Neutrophil lipid bodies were not enveloped by membrane but were often surrounded by a more electron-dense shell at their periphery. Normal peripheral blood neutrophils contained an average of approximately one lipid body per cell. Lipid bodies appeared in greater numbers in neutrophils from inflammatory lesions. Perturbation of neutrophils during conventional methods of cell isolation and purification modestly increased lipid body numbers in neutrophils, whereas incubation of neutrophils with 1 microM oleic acid rapidly induced lipid body formation over 30 to 60 minutes. After granulocytes were incubated for 2 hours with 3H-fatty acids, including arachidonic, oleic, and palmitic acids, electron microscopic autoradiography demonstrated that lipid bodies represented the predominant intracellular sites of localization of each of the three 3H-fatty acids. There was lesser labeling noted in the perinuclear cisterna, but not in cell membranes. Virtually all of each of the three 3H-fatty acids incorporated by the neutrophils were esterified into chromatographically resolved classes of neutral lipids or phospholipids. These findings indicate that cytoplasmic lipid bodies are more prominent in neutrophils in vivo engaged in inflammatory responses and that these organelles in human neutrophils function as sites of deposition of esterified, incorporated fatty acids

  4. Cytoplasmic Dynein Regulation by Subunit Heterogeneity and Its Role in Apical Transport

    Science.gov (United States)

    Tai, Andrew W.; Chuang, Jen-Zen; Sung, Ching-Hwa

    2001-01-01

    Despite the existence of multiple subunit isoforms for the microtubule motor cytoplasmic dynein, it has not yet been directly shown that dynein complexes with different compositions exhibit different properties. The 14-kD dynein light chain Tctex-1, but not its homologue RP3, binds directly to rhodopsin's cytoplasmic COOH-terminal tail, which encodes an apical targeting determinant in polarized epithelial Madin-Darby canine kidney (MDCK) cells. We demonstrate that Tctex-1 and RP3 compete for binding to dynein intermediate chain and that overexpressed RP3 displaces endogenous Tctex-1 from dynein complexes in MDCK cells. Furthermore, replacement of Tctex-1 by RP3 selectively disrupts the translocation of rhodopsin to the MDCK apical surface. These results directly show that cytoplasmic dynein function can be regulated by its subunit composition and that cytoplasmic dynein is essential for at least one mode of apical transport in polarized epithelia. PMID:11425878

  5. Adsorption of Benzaldehyde on Granular Activated Carbon: Kinetics, Equilibrium, and Thermodynamic

    OpenAIRE

    Rajoriya, R.K.; Prasad, B.; Mishra, I.M.; Wasewar, K.L.

    2007-01-01

    Adsorption isotherms of benzaldehyde from aqueous solutions onto granular activated carbon have been determined and studied the effect of dosage of granular activated carbon, contact time, and temperature on adsorption. Optimum conditions for benzaldehyde removal were found adsorbent dose 4 g l–1 of solution and equilibrium time t 4 h. Percent removal of benzaldehyde increases with the increase in adsorbent dose for activated carbon, however, it decreases with increase in benzaldehyde m...

  6. A therapeutic and diagnostic dilemma: granular cell tumor of the breast.

    Science.gov (United States)

    Pergel, Ahmet; Yucel, Ahmet Fikret; Karaca, A Serdar; Aydin, Ibrahim; Sahin, Dursun Ali; Demirbag, Nilgun

    2011-01-01

    Six to eight percent of granular cell tumors are seen in the breast. Although mostly benign, they rarely have malignant features clinically and radiologically reminding of breast cancer. This may lead to a potential misdiagnosis of breast carcinoma and overtreatment of patients. The final diagnosis is made by immunohistochemical examination. We performed excisional biopsy on a patient who was diagnosed to have a breast mass. The histopathological examination of the mass revealed granular cell tumor.

  7. Scattering of waves by impurities in precompressed granular chains.

    Science.gov (United States)

    Martínez, Alejandro J; Yasuda, Hiromi; Kim, Eunho; Kevrekidis, P G; Porter, Mason A; Yang, Jinkyu

    2016-05-01

    We study scattering of waves by impurities in strongly precompressed granular chains. We explore the linear scattering of plane waves and identify a closed-form expression for the reflection and transmission coefficients for the scattering of the waves from both a single impurity and a double impurity. For single-impurity chains, we show that, within the transmission band of the host granular chain, high-frequency waves are strongly attenuated (such that the transmission coefficient vanishes as the wavenumber k→±π), whereas low-frequency waves are well-transmitted through the impurity. For double-impurity chains, we identify a resonance-enabling full transmission at a particular frequency-in a manner that is analogous to the Ramsauer-Townsend (RT) resonance from quantum physics. We also demonstrate that one can tune the frequency of the RT resonance to any value in the pass band of the host chain. We corroborate our theoretical predictions both numerically and experimentally, and we directly observe almost complete transmission for frequencies close to the RT resonance frequency. Finally, we show how this RT resonance can lead to the existence of reflectionless modes in granular chains (including disordered ones) with multiple double impurities.

  8. Granular Gas in a Periodic Lattice

    Science.gov (United States)

    Dorbolo, S.; Brandenbourger, M.; Damanet, F.; Dister, H.; Ludewig, F.; Terwagne, D.; Lumay, G.; Vandewalle, N.

    2011-01-01

    Glass beads are placed in the compartments of a horizontal square grid. This grid is then vertically shaken. According to the reduced acceleration [image omitted] of the system, the granular material exhibits various behaviours. By counting the number of beads in each compartment after shaking, it is possible to define three regimes. At low…

  9. 10th International Conference “Traffic and Granular Flow”

    CERN Document Server

    Boltes, Maik; Schadschneider, Andreas; Seyfried, Armin

    2015-01-01

    This book continues the biannual series of conference proceedings, which has become a classical reference resource in traffic and granular research alike, and addresses the latest developments at the intersection of physics, engineering and computational science. These involve complex systems, in which multiple simple agents, be they vehicles or particles, give rise to surprising and fascinating phenomena. The contributions collected in these proceedings cover several research fields, all of which deal with transport. Topics include highway, pedestrian and internet traffic; granular matter; biological transport; transport networks; data acquisition; data analysis and technological applications. Different perspectives, i.e., modeling, simulations, experiments, and phenomenological observations are considered.    

  10. Properties of surface waves in granular media under gravity

    International Nuclear Information System (INIS)

    Zheng He-Peng

    2014-01-01

    Acoustical waves propagating along the free surface of granular media under gravity are investigated in the framework of elasticity theory. The influence of stress on a surface wave is analyzed. The results have shown that two types of surface waves, namely sagittal and transverse modes exist depending on initial stress states, which may have some influence on the dispersion relations of surface waves, but the influence is not great. Considering that the present experimental accuracy is far from distinguishing this detail, the validity of elasticity theory on the surface waves propagating in granular media can still be maintained. (electromagnetism, optics, acoustics, heat transfer, classical mechanics, and fluid dynamics)

  11. Critical fields of niobium nitride films of various granularity

    International Nuclear Information System (INIS)

    Antonova, E.A.; Sukhov, V.A.

    1983-01-01

    The behaviour of lattice parameter, specific electrical resistivity, critical temperature, and temperature dependence of upper critical field near Tsub(cr) of sputtered niobium nitride films is investigated versus the substrate temperature and gas mixture composition in the process of reactive cathode sputtering. The relation between extrapolated value of the upper critical field and granularity of niobium nitride films, close as to composition to the stoichiometric one, has been found. Values of the kappa parameter of the Ginsburg-Landau theory and of the coherence length for niobium nitride films of various granularity are estimated in an approximation of uniform distribution of impurities in a sample

  12. Frost susceptibility of granular subbase materials contaminated by deicing chemicals

    DEFF Research Database (Denmark)

    Jørgensen, Anders Stuhr; Orlander, Tobias; Doré, Guy

    2013-01-01

    The increase in urban population in arctic areas leads to an increased demand for transportation infrastructures (such as roads and airfields) in the regions. This challenges the road constructions in terms of condition, bearing capacity and maintenance. It is believed that deicing agents used...... on roads and airfields enter the granular subbase materials and thereby makes the soil more frost-susceptible. In this project a series of isothermal frost heave tests has been carried out on granular subbase material from the runway at Kuujjuaq Airport, Québec, Canada. The tests have been carried out...

  13. Detection of beta-tubulin in the cytoplasm of the interphasic Entamoeba histolytica trophozoites.

    Science.gov (United States)

    Gómez-Conde, Eduardo; Vargas-Mejía, Miguel Ángel; Díaz-Orea, María Alicia; Hernández-Rivas, Rosaura; Cárdenas-Perea, María Elena; Guerrero-González, Tayde; González-Barrios, Juan Antonio; Montiel-Jarquín, Álvaro José

    2016-08-01

    It is known that the microtubules (MT) of Entamoeba histolytica trophozoites form an intranuclear mitotic spindle. However, electron microscopy studies and the employment of anti-beta-tubulin (β-tubulin) antibodies have not exhibited these cytoskeletal structures in the cytoplasm of these parasites. The purpose of this work was to detect β-tubulin in the cytoplasm of interphasic E. histolytica trophozoites. Activated or non-activated HMI-IMSS-strain E. histolytica trophozoites were used and cultured for 72 h at 37 °C in TYI-S-33 medium, and then these were incubated with the anti-β-tubulin antibody of E. histolytica. The anti-β-tubulin antibody reacted with the intranuclear mitotic spindle of E. histolytica-activated trophozoites as control. In contrast, in non-activated interphasic parasites, anti-β-tubulin antibody reacted with diverse puntiform structures in the cytoplasm and with ring-shaped structures localized in the cytoplasm, cellular membrane and endocytic stomas. In this work, for the first time, the presence of β-tubulin is shown in the cytoplasm of E. histolytica trophozoites. Copyright © 2016 Elsevier Inc. All rights reserved.

  14. DEM Simulation of Biaxial Compression Experiments of Inherently Anisotropic Granular Materials and the Boundary Effects

    Directory of Open Access Journals (Sweden)

    Zhao-Xia Tong

    2013-01-01

    Full Text Available The reliability of discrete element method (DEM numerical simulations is significantly dependent on the particle-scale parameters and boundary conditions. To verify the DEM models, two series of biaxial compression tests on ellipse-shaped steel rods are used. The comparisons on the stress-strain relationship, strength, and deformation pattern of experiments and simulations indicate that the DEM models are able to capture the key macro- and micromechanical behavior of inherently anisotropic granular materials with high fidelity. By using the validated DEM models, the boundary effects on the macrodeformation, strain localization, and nonuniformity of stress distribution inside the specimens are investigated using two rigid boundaries and one flexible boundary. The results demonstrate that the boundary condition plays a significant role on the stress-strain relationship and strength of granular materials with inherent fabric anisotropy if the stresses are calculated by the force applied on the wall. However, the responses of the particle assembly measured inside the specimens are almost the same with little influence from the boundary conditions. The peak friction angle obtained from the compression tests with flexible boundary represents the real friction angle of particle assembly. Due to the weak lateral constraints, the degree of stress nonuniformity under flexible boundary is higher than that under rigid boundary.

  15. DEM simulation of granular flows in a centrifugal acceleration field

    Science.gov (United States)

    Cabrera, Miguel Angel; Peng, Chong; Wu, Wei

    2017-04-01

    The main purpose of mass-flow experimental models is abstracting distinctive features of natural granular flows, and allow its systematic study in the laboratory. In this process, particle size, space, time, and stress scales must be considered for the proper representation of specific phenomena [5]. One of the most challenging tasks in small scale models, is matching the range of stresses and strains among the particle and fluid media observed in a field event. Centrifuge modelling offers an alternative to upscale all gravity-driven processes, and it has been recently employed in the simulation of granular flows [1, 2, 3, 6, 7]. Centrifuge scaling principles are presented in Ref. [4], collecting a wide spectrum of static and dynamic models. However, for the case of kinematic processes, the non-uniformity of the centrifugal acceleration field plays a major role (i.e., Coriolis and inertial effects). In this work, we discuss a general formulation for the centrifugal acceleration field, implemented in a discrete element model framework (DEM), and validated with centrifuge experimental results. Conventional DEM simulations relate the volumetric forces as a function of the gravitational force Gp = mpg. However, in the local coordinate system of a rotating centrifuge model, the cylindrical centrifugal acceleration field needs to be included. In this rotating system, the centrifugal acceleration of a particle depends on the rotating speed of the centrifuge, as well as the position and speed of the particle in the rotating model. Therefore, we obtain the formulation of centrifugal acceleration field by coordinate transformation. The numerical model is validated with a series of centrifuge experiments of monodispersed glass beads, flowing down an inclined plane at different acceleration levels and slope angles. Further discussion leads to the numerical parameterization necessary for simulating equivalent granular flows under an augmented acceleration field. The premise of

  16. Anti-neutrophil cytoplasmic antibodies in rheumatoid arthritis: two case reports and review of literature

    Directory of Open Access Journals (Sweden)

    Spoerl David

    2012-12-01

    Full Text Available Abstract Background Anti-neutrophil cytoplasmic antibodies are typically detected in anti-neutrophil cytoplasmic antibody associated vasculitis, but are also present in a number of chronic inflammatory non-vasculitic conditions like rheumatoid arthritis. Rare cases of granulomatosis with polyangiitis (formerly known as Wegener’s granulomatosis, a vasculitic disorder frequently associated with the presence of anti-neutrophil cytoplasmic antibodies in patients with rheumatoid arthritis have been described in literature. Case presentation We report two middle-aged female patients with rheumatoid arthritis who developed anti-neutrophil cytoplasmic antibodies and symptoms reminiscent of granulomatosis with polyangiitis. Despite the lack of antibodies specific for proteinase 3 and the absence of a classical histology, we report a probable case of granulomatosis with polyangiitis in the first patient, and consider rheumatoid vasculitis in the second patient. Conclusion Taken together with previous reports, these cases highlight that anti-neutrophil cytoplasmic antibodies have to be evaluated very carefully in patients with rheumatoid arthritis. In this context, anti-neutrophil cytoplasmic antibodies detected by indirect immunofluorescence appear to have a low diagnostic value for granulomatosis with polyangiitis. Instead they may have prognostic value for assessing the course of rheumatoid arthritis.

  17. Centrifuge modelling of granular flows

    Science.gov (United States)

    Cabrera, Miguel Angel; Wu, Wei

    2015-04-01

    A common characteristic of mass flows like debris flows, rock avalanches and mudflows is that gravity is their main driving force. Gravity defines the intensity and duration of the main interactions between particles and their surrounding media (particle-particle, particle-fluid, fluid-fluid). At the same time, gravity delimits the occurrence of phase separation, inverse segregation, and mass consolidation, among other phenomena. Therefore, in the understanding of the flow physics it is important to account for the scaling of gravity in scaled models. In this research, a centrifuge model is developed to model free surface granular flows down an incline at controlled gravity conditions. Gravity is controlled by the action of an induced inertial acceleration field resulting from the rotation of the model in a geotechnical centrifuge. The characteristics of the induced inertial acceleration field during flow are discussed and validated via experimental data. Flow heights, velocity fields, basal pressure and impact forces are measured for a range of channel inclinations and gravity conditions. Preliminary results enlighten the flow characteristics at variable gravity conditions and open a discussion on the simulation of large scale processes at a laboratory scale. Further analysis on the flow physics brings valuable information for the validation of granular flows rheology.

  18. A Therapeutic and Diagnostic Dilemma: Granular Cell Tumor of the Breast

    Directory of Open Access Journals (Sweden)

    Ahmet Pergel

    2011-01-01

    Full Text Available Six to eight percent of granular cell tumors are seen in the breast. Although mostly benign, they rarely have malignant features clinically and radiologically reminding of breast cancer. This may lead to a potential misdiagnosis of breast carcinoma and overtreatment of patients. The final diagnosis is made by immunohistochemical examination. We performed excisional biopsy on a patient who was diagnosed to have a breast mass. The histopathological examination of the mass revealed granular cell tumor.

  19. Pion showers in highly granular calorimeters

    Indian Academy of Sciences (India)

    New results on properties of hadron showers created by pion beam at 8–80 GeV in high granular electromagnetic and hadron calorimeters are presented. Data were used for the first time to investigate the separation of the neutral and charged hadron showers. The result is important to verify the prediction of the PFA ...

  20. Random packing of colloids and granular matter

    NARCIS (Netherlands)

    Wouterse, A.

    2008-01-01

    This thesis deals with the random packing of colloids and granular matter. A random packing is a stable disordered collection of touching particles, without long-range positional and orientational order. Experimental random packings of particles with the same shape but made of different materials

  1. Water diffusion in cytoplasmic streaming in Elodea internodal cells under the effect of antimitotic agents.

    Science.gov (United States)

    Vorob'ev, Vladimir N; Anisimov, Alexander V; Dautova, Nailya R

    2008-07-01

    The translational displacement of the cytoplasmic water in Elodea stem cells resulting from protein motor activity was measured using the NMR method. A 24-h treatment with vincristine results in a reduction of the translational displacement of the cytoplasmic water. With a constant cytoplasmic streaming velocity, the dynamics of the translational displacement of the cytoplasmic water under the effect of taxol are characterized by a continuous increase at a concentration of 0.05 mM, and reaching a plateau at a concentration of 0.5 mM.

  2. Genetic expression of induced rice sterility under alien-cytoplasm

    International Nuclear Information System (INIS)

    Wang Naiyuan; Cai Zhijun; Liang Kangjing; Li Yu

    2005-01-01

    Rice restorer lines were treated with 60 Co γ-ray and 4 male sterile mutants obtained with the fertility of controlled by 4 non-allelic recessive genes, respectively. Sixty combinations were made by using male sterile plants/fertile plants as male parents, and 15 different cytoplasmic substitution lines of the same cell nucleus as female parents. The result showed that F 1 spikelets were normal and fertile, and different numbers of male sterile plants were segregated in F 2 . Complete fertility genotype was not found among interactions between induced male sterile genes and alien-cytoplasms. (authors)

  3. The Stability Analysis Method of the Cohesive Granular Slope on the Basis of Graph Theory.

    Science.gov (United States)

    Guan, Yanpeng; Liu, Xiaoli; Wang, Enzhi; Wang, Sijing

    2017-02-27

    This paper attempted to provide a method to calculate progressive failure of the cohesivefrictional granular geomaterial and the spatial distribution of the stability of the cohesive granular slope. The methodology can be divided into two parts: the characterization method of macro-contact and the analysis of the slope stability. Based on the graph theory, the vertexes, the edges and the edge sequences are abstracted out to characterize the voids, the particle contact and the macro-contact, respectively, bridging the gap between the mesoscopic and macro scales of granular materials. This paper adopts this characterization method to extract a graph from a granular slope and characterize the macro sliding surface, then the weighted graph is analyzed to calculate the slope safety factor. Each edge has three weights representing the sliding moment, the anti-sliding moment and the braking index of contact-bond, respectively, . The safety factor of the slope is calculated by presupposing a certain number of sliding routes and reducing Weight repeatedly and counting the mesoscopic failure of the edge. It is a kind of slope analysis method from mesoscopic perspective so it can present more detail of the mesoscopic property of the granular slope. In the respect of macro scale, the spatial distribution of the stability of the granular slope is in agreement with the theoretical solution.

  4. Effects of Noise and Vibration on the Solid to Liquid Fluidization Transition in Small Dense Granular Systems Under Shear

    Science.gov (United States)

    Melhus, Martin Frederic

    2011-07-01

    Granular materials exhibit bulk properties that are distinct from conventional solids, liq- uids, and gases, due to the dissipative nature of the inter-granular forces. Understanding the fundamentals of granular materials draws upon and gives insight into many fields at the current frontiers of physics, such as plasticity of solids, fracture and friction, com- plex systems such as colloids, foams and suspensions, and a variety of biological systems. Particulate flows are widespread in geophysics, and are also essential to many industries. Despite the importance of these phenomena, we lack a theoretical model that explains most behaviors of granular materials. Since granular assemblies are highly dissipative, they are often far from mechanical equilibrium, making most classical analyses inappli- cable. A theory for dilute granular systems exists, but for dense granular systems (by far the majority of granular systems in the real world) no comparable theory is accepted. We approach this problem by examining the fluidization, or transition from solid to liquid, in dense granular systems. In this study, the separate effects of random noise and vibration on the static to flowing transition of a dense granular assembly under planar shear is studied numerically using soft contact particle dynamics simulations in two dimensions. We focus on small systems in a thin planar Couette cell, examining the bistable region while increasing shear, with varying amounts of random noise or vibration, and determine the statistics of the shear required for the onset of flow. We find that the applied power is the key parameter in determining the magnitude of the effects of the noise or vibration, with vibration frequency also having an influence. Similarities and differences between noise and vibration are determined, and the results compare favorably with a two phase model for dense granular flow.

  5. Coupled granular/continuous medium for thermally stable perpendicular magnetic recording

    International Nuclear Information System (INIS)

    Sonobe, Y.; Weller, D.; Ikeda, Y.; Takano, K.; Schabes, M.E.; Zeltzer, G.; Do, H.; Yen, B.K.; Best, M.E.

    2001-01-01

    We studied coupled granular/continuous (CGC) perpendicular media consisting of a continuous multilayer structure and a granular layer. The addition of Co/Pt multilayers decreased the nucleation field from 200 to -1800 Oe and increased the squareness from 0.9 to 1.0. The moment decay at room temperature was significantly reduced from -4.8% to -0.05% per decade. At elevated temperatures, strong exchange coupling between a granular layer and a continuous layer is needed for thermal stability. The exchange-coupled continuous layer reduces thermal demagnetization as it effectively increases the grain size, tightens the grain distribution, and prevents the reversal of individual grains. Magnetic Force Microscope image showed a larger magnetic cluster size for the CGC structure. Compared to the CoCr 18 Pt 12 medium, the CGC medium had 2.3 dB higher output. However, the noise for the CGC medium increased with the recording density, while the noise for the CoCr 18 Pt 12 medium remained constant from 4 to 15 kfc/mm. Further optimization and noise reduction are still required for future high density recording

  6. Large granular lymphocytosis in a patient infected with HTLV-II.

    Science.gov (United States)

    Martin, M P; Biggar, R J; Hamlin-Green, G; Staal, S; Mann, D

    1993-08-01

    HTLV-II has been associated with a variety of lymphoproliferative disorders, including atypical hairy cell leukemia, chronic T cell leukemia, T prolymphocytic leukemia, and large granular lymphocytic leukemia. However, a direct or indirect role for HTLV-II in these disorders is not yet firmly established. We studied a patient diagnosed as having leukemia of the large granular lymphocyte (LGL) type who was HTLV-II seropositive, to determine if the expanded cell population was infected. Two populations of CD3-CD16+ LGL were identified; one was CD8+, the other CD8-. Populations of cells with these surface markers as well as normal CD3+CD4+ and CD3+CD8+ cells were separated by flow cytometric methods, DNA extracted, and gene regions of HTLV-II pol and tax amplified, using the polymerase chain reaction, and probed after Southern blotting. HTLV-II was detected in the CD3+CD8+ population, and not in the CD3-CD16+ large granular lymphocyte population. This finding indicates that the role of HTLV-II, if any, in LGL proliferation is indirect.

  7. Coupled granular/continuous medium for thermally stable perpendicular magnetic recording

    Science.gov (United States)

    Sonobe, Y.; Weller, D.; Ikeda, Y.; Takano, K.; Schabes, M. E.; Zeltzer, G.; Do, H.; Yen, B. K.; Best, M. E.

    2001-10-01

    We studied coupled granular/continuous (CGC) perpendicular media consisting of a continuous multilayer structure and a granular layer. The addition of Co/Pt multilayers decreased the nucleation field from 200 to -1800 Oe and increased the squareness from 0.9 to 1.0. The moment decay at room temperature was significantly reduced from -4.8% to -0.05% per decade. At elevated temperatures, strong exchange coupling between a granular layer and a continuous layer is needed for thermal stability. The exchange-coupled continuous layer reduces thermal demagnetization as it effectively increases the grain size, tightens the grain distribution, and prevents the reversal of individual grains. Magnetic Force Microscope image showed a larger magnetic cluster size for the CGC structure. Compared to the CoCr 18Pt 12 medium, the CGC medium had 2.3 dB higher output. However, the noise for the CGC medium increased with the recording density, while the noise for the CoCr 18Pt 12 medium remained constant from 4 to 15 kfc/mm. Further optimization and noise reduction are still required for future high density recording.

  8. HuR cytoplasmic expression is associated with increased cyclin A expression and poor outcome with upper urinary tract urothelial carcinoma

    International Nuclear Information System (INIS)

    Liang, Peir-In; Shiue, Yow-Ling; Huang, Hsuan-Ying; Hsu, Han-Ping; Chen, Li-Tzon; Lin, Ching-Yih; Tai, Chein; Lin, Chun-Mao; Li, Chien-Feng; Li, Wei-Ming; Wang, Yu-Hui; Wu, Ting-Feng; Wu, Wen-Ren; Liao, Alex C; Shen, Kun-Hung; Wei, Yu-Ching; Hsing, Chung-Hsi

    2012-01-01

    HuR is an RNA-binding protein that post-transcriptionally modulates the expressions of various target genes implicated in carcinogenesis, such as CCNA2 encoding cyclin A. No prior study attempted to evaluate the significance of HuR expression in a large cohort with upper urinary tract urothelial carcinomas (UTUCs). In total, 340 cases of primary localized UTUC without previous or concordant bladder carcinoma were selected. All of these patients received ureterectomy or radical nephroureterectomy with curative intents. Pathological slides were reviewed, and clinical findings were collected. Immunostaining for HuR and cyclin A was performed and evaluated by using H-score. The results of cytoplasmic HuR and nuclear cyclin A expressions were correlated with disease-specific survival (DSS), metastasis-free survival (MeFS), urinary bladder recurrence-free survival (UBRFS), and various clinicopathological factors. HuR cytoplasmic expression was significantly related to the pT status, lymph node metastasis, a higher histological grade, the pattern of invasion, vascular and perineurial invasion, and cyclin A expression (p = 0.005). Importantly, HuR cytoplasmic expression was strongly associated with a worse DSS (p < 0.0001), MeFS (p < 0.0001), and UBRFS (p = 0.0370) in the univariate analysis, and the first two results remained independently predictive of adverse outcomes (p = 0.038, relative risk [RR] = 1.996 for DSS; p = 0.027, RR = 1.880 for MeFS). Cyclin A nuclear expression was associated with a poor DSS (p = 0.0035) and MeFS (p = 0.0015) in the univariate analysis but was not prognosticatory in the multivariate analyses. High-risk patients (pT3 or pT4 with/without nodal metastasis) with high HuR cytoplasmic expression had better DSS if adjuvant chemotherapy was performed (p = 0.015). HuR cytoplasmic expression was correlated with adverse phenotypes and cyclin A overexpression and also independently predictive of worse DSS and MeFS, suggesting its roles in

  9. Nucleocapsid Protein from Fig Mosaic Virus Forms Cytoplasmic Agglomerates That Are Hauled by Endoplasmic Reticulum Streaming

    Science.gov (United States)

    Ishikawa, Kazuya; Miura, Chihiro; Maejima, Kensaku; Komatsu, Ken; Hashimoto, Masayoshi; Tomomitsu, Tatsuya; Fukuoka, Misato; Yusa, Akira; Yamaji, Yasuyuki

    2014-01-01

    ABSTRACT Although many studies have demonstrated intracellular movement of viral proteins or viral replication complexes, little is known about the mechanisms of their motility. In this study, we analyzed the localization and motility of the nucleocapsid protein (NP) of Fig mosaic virus (FMV), a negative-strand RNA virus belonging to the recently established genus Emaravirus. Electron microscopy of FMV-infected cells using immunogold labeling showed that NPs formed cytoplasmic agglomerates that were predominantly enveloped by the endoplasmic reticulum (ER) membrane, while nonenveloped NP agglomerates also localized along the ER. Likewise, transiently expressed NPs formed agglomerates, designated NP bodies (NBs), in close proximity to the ER, as was the case in FMV-infected cells. Subcellular fractionation and electron microscopic analyses of NP-expressing cells revealed that NBs localized in the cytoplasm. Furthermore, we found that NBs moved rapidly with the streaming of the ER in an actomyosin-dependent manner. Brefeldin A treatment at a high concentration to disturb the ER network configuration induced aberrant accumulation of NBs in the perinuclear region, indicating that the ER network configuration is related to NB localization. Dominant negative inhibition of the class XI myosins, XI-1, XI-2, and XI-K, affected both ER streaming and NB movement in a similar pattern. Taken together, these results showed that NBs localize in the cytoplasm but in close proximity to the ER membrane to form enveloped particles and that this causes passive movements of cytoplasmic NBs by ER streaming. IMPORTANCE Intracellular trafficking is a primary and essential step for the cell-to-cell movement of viruses. To date, many studies have demonstrated the rapid intracellular movement of viral factors but have failed to provide evidence for the mechanism or biological significance of this motility. Here, we observed that agglomerates of nucleocapsid protein (NP) moved rapidly

  10. Granular activated carbon assisted ozonation of cephalexin antibiotic

    International Nuclear Information System (INIS)

    Akhtar, J.; Amin, N.S.; Imran, M.

    2016-01-01

    This study investigates removal of cephalexin using ozonation in the presence of granular activated carbon. Initial experiments were carried out about adsorption of cephalexin onto granular activated carbon, effect of catalytic ozonation, and biodegradability of cephalexin solution. The effect of ozonation on pH, ozone utilization efficiency and decomposition byproducts, was observed. Response surface methodology was adopted to optimize three operating parameters pH of solution, ozone supply and cephalexin concentration. GAC assisted ozonation, was found to be effective in decomposing COD (chemical oxygen demand) and cephalexin from solution. Optimum values of variables were pH from 7-8, ozone supply 30 mg/L and 100 mg/L of cephalexin solution. The complete removal of cephalexin and 60% COD removal was achieved at these optimum input values. (author)

  11. The calculation of resonance capture in granular fuels

    Energy Technology Data Exchange (ETDEWEB)

    Askew, J R; Harris, D W.G.; Hutton, J L

    1971-02-15

    The methods used in the UK for the calculation of resonance capture in granular HTR fuels follow the long established path of determining a 'geometric equivalence' which equates the resonance shielding to that in a homogeneous mixture of the resonance absorber in hydrogen. Simple collision probability arguments, usually for the black limit, were used for AGR and SGHW systems. For granular fuel a 'grey' equivalence, convenient for numerical use, has been adopted, and the geometric solution performed in two ways: by a synthetic collision probability model which is rapid and appropriate for design work and by a Monte Carlo model which allows details of the grain lattice structure to be studied. The results are in good agreement, and are shown to give good results compared with measured relative conversion ratios in the NESTOR stack experiments.

  12. Modeling compaction-induced energy dissipation of granular HMX

    Energy Technology Data Exchange (ETDEWEB)

    Gonthier, K.A. [Lamar Univ., Beaumont, TX (US). Dept. of Mechanical Engineering; Menikoff, R.; Son, S.F.; Asay, B.W. [Los Alamos National Lab., NM (US)

    1998-12-31

    A thermodynamically consistent model is developed for the compaction of granular solids. The model is an extension of the single phase limit of two-phase continuum models used to describe Deflagration-to-Detonation Transition (DDT) experiments. The focus is on the energetics and dissipation of the compaction process. Changes in volume fraction are partitioned into reversible and irreversible components. Unlike conventional DDT models, the model is applicable from the quasi-static to dynamic compaction regimes for elastic, plastic, or brittle materials. When applied to the compaction of granular HMX (a brittle material), the model predicts results commensurate with experiments including stress relaxation, hysteresis, and energy dissipation. The model provides a suitable starting point for the development of thermal energy localization sub-scale models based on compaction-induced dissipation.

  13. Novel Discrete Element Method for 3D non-spherical granular particles.

    Science.gov (United States)

    Seelen, Luuk; Padding, Johan; Kuipers, Hans

    2015-11-01

    Granular materials are common in many industries and nature. The different properties from solid behavior to fluid like behavior are well known but less well understood. The main aim of our work is to develop a discrete element method (DEM) to simulate non-spherical granular particles. The non-spherical shape of particles is important, as it controls the behavior of the granular materials in many situations, such as static systems of packed particles. In such systems the packing fraction is determined by the particle shape. We developed a novel 3D discrete element method that simulates the particle-particle interactions for a wide variety of shapes. The model can simulate quadratic shapes such as spheres, ellipsoids, cylinders. More importantly, any convex polyhedron can be used as a granular particle shape. These polyhedrons are very well suited to represent non-rounded sand particles. The main difficulty of any non-spherical DEM is the determination of particle-particle overlap. Our model uses two iterative geometric algorithms to determine the overlap. The algorithms are robust and can also determine multiple contact points which can occur for these shapes. With this method we are able to study different applications such as the discharging of a hopper or silo. Another application the creation of a random close packing, to determine the solid volume fraction as a function of the particle shape.

  14. Heritable effect of plant water availability conditions on restoration of male fertility in the ‘9E’ CMS-inducing cytoplasm of sorghum

    Directory of Open Access Journals (Sweden)

    Lev Aleksandrovich Elkonin

    2012-05-01

    Full Text Available Heritable changes of phenotype arising in plant ontogenesis by the influence of environmental factors belong to the most intriguing genetic phenomena. Studying restoration of male fertility in the ‘9E’ type of CMS-inducing cytoplasm of sorghum and related CMS-inducing cytoplasms, A4 and M35-1A, in some hybrid combinations, we found an unusual inheritance pattern: the Rf-genes functioned in the self-pollinated progenies of F1 hybrids (up to F10 but did not or poorly expressed in backcrosses of these hybrids to CMS-lines with the same cytoplasm type. In experiments on parallel growing of the same F1 hybrid combinations in the ‘dry plot’ and in the ‘irrigated plot’, it was found that high level of plant water availability during panicle and pollen developmental stages significantly increased male fertility of F1 and testcross hybrid populations, in which fertility-restoring genes were in heterozygote state, whereas in F2 populations the influences of water availability conditions cause less pronounce effects. Similarly, male-sterile F1 plants, being transferred from the ‘dry plot’ to greenhouse, produced male-fertile panicles. In addition, male-sterile plants from F2 families, which segregated-out as recessives, being transferred to greenhouse also produced male-fertile panicles. In the progenies of these revertants that were grown in field conditions and in the ‘dry plot’, stable inheritance of male fertility for 3 cycles of self-pollination was observed, and a number of stable fertile lines in the ‘9E’ cytoplasm were obtained. However, in test-crosses of these fertile lines to CMS-lines with the ‘9E’ cytoplasm restoration of male fertility was not observed, except the progeny of one revertant that behaved as fertility-restorer line. These data suggest that the functional state of fertility-restoring genes for the ‘9E’ sorghum cytoplasm is epigenetically-regulated trait established by the influence of environmental

  15. Microgravity experiments on a granular gas of elongated grains

    Science.gov (United States)

    Harth, K.; Trittel, T.; Kornek, U.; Höme, S.; Will, K.; Strachauer, U.; Stannarius, R.

    2013-06-01

    Granular gases represent well-suited systems to investigate statistical granular dynamics. The literature comprises numerous investigations of ensembles of spherical or irregularly shaped grains. Mainly computer models, analytical theories and experiments restricted to two dimensions were reported. In three-dimensions, the gaseous state can only be maintained by strong external excitation, e. g. vibrations or electro-magnetic fields, or in microgravity. A steady state, where the dynamics of a weakly disturbed granular gas are governed by particle-particle collisions, is hard to realize with spherical grains due to clustering. We present the first study of a granular gas of elongated cylinders in three dimensions. The mean free path is considerably reduced with respect to spheres at comparable filling fractions. The particles can be tracked in 3D over a sequence of frames. In a homogeneous steady state, we find non-Gaussian velocity distributions and a lack of equipartition of kinetic energy. We discuss the relations between energy input and vibrating plate accelerations. At the request of the authors and the Proceedings Editors, the PDF file of this article has been updated to amend some references present in the PDF file submitted to AIP Publishing. The references affected are listed here:[1] (c) K. Nichol and K. E. Daniels, Phys. Rev. Lett. 108, 018001 (2012); [11] (e) P. G. de Gennes and J. Prost, The Physics of Liquid Crystals, Clarendon Press, Oxford (1993); [17] (b) K. Harth, et al., Phys. Rev. Lett. 110, 144102 (2013).A LaTeX processing error resulted in changes to the authors reference formatting, which was not detected prior to publication. Due apologies are given to the authors for this oversight. The updated article PDF was published on 12 August 2013.

  16. Stress distribution in quasi-crystalline granular piles

    NARCIS (Netherlands)

    Trigger, S.A.; Heijst, van G.J.F.; Krasnopolskaya, T.S.; Schram, P.P.J.M.

    2001-01-01

    The main goal of this paper is a rigorous consideration of the stress problem in some simple models of granular piles. Discrete models are considered and the transition to the continuous description is accomplished in order to find the coarse-grained average stress. Some phenomenological rules are

  17. Regulation of Cytoplasmic and Vacuolar Volumes by Plant Cells in Suspension Culture

    DEFF Research Database (Denmark)

    Owens, Trevor; Poole, Ronald J

    1979-01-01

    Quantitative microscopical measurements have been made of the proportion of cell volume occupied by cytoplasm in a cell suspension culture derived from cotyledons of bush bean (cv. Contender). On a 7-day culture cycle, the content of cytoplasm varies from 25% at the time of transfer to 45% at the...

  18. Jamming of three-dimensional prolate granular materials.

    Science.gov (United States)

    Desmond, K; Franklin, Scott V

    2006-03-01

    We have found that the ability of long thin rods to jam into a solidlike state in response to a local perturbation depends upon both the particle aspect ratio and the container size. The dynamic phase diagram in this parameter space reveals a broad transition region separating granular stick-slip and solidlike behavior. In this transition region the pile displays both solid and stick-slip behavior. We measure the force on a small object pulled through the pile, and find the fluctuation spectra to have power law tails with an exponent characteristic of the region. The exponent varies from beta=-2 in the stick-slip region to beta=-1 in the solid region. These values reflect the different origins--granular rearrangements vs dry friction--of the fluctuations. Finally, the packing fraction shows only a slight dependence on container size, but depends on aspect ratio in a manner predicted by mean-field theory and implies an aspect-ratio-independent contact number of =5.25 +/- 0.03.

  19. Jetting and flooding of granular backfill materials : [summary].

    Science.gov (United States)

    2015-03-01

    Granular backfill materials on highway projects are often compacted by mechanical methods. : This requires the contractor to place backfill material into loose lifts of varying thickness : and use compaction equipment to reduce air voids and increase...

  20. Arching Structures in Granular Sedimentary Deposits

    Czech Academy of Sciences Publication Activity Database

    Kulaviak, Lukáš; Hladil, Jindřich; Růžička, Marek; Drahoš, Jiří; Saint-Lary, L.

    2013-01-01

    Roč. 246, SEP (2013), s. 269-277 ISSN 0032-5910 R&D Projects: GA ČR GA104/07/1110; GA AV ČR IAAX00130702; GA MŠk(CZ) LG11014 Institutional support: RVO:67985858 ; RVO:67985831 Keywords : wet granulars * deposit * arching structure Subject RIV: CI - Industrial Chemistry, Chemical Engineering; DB - Geology ; Mineralogy (GLU-S) Impact factor: 2.269, year: 2013

  1. Three-tier multi-granularity switching system based on PCE

    Science.gov (United States)

    Wang, Yubao; Sun, Hao; Liu, Yanfei

    2017-10-01

    With the growing demand for business communications, electrical signal processing optical path switching can't meet the demand. The multi-granularity switch system that can improve node routing and switching capabilities came into being. In the traditional network, each node is responsible for calculating the path; synchronize the whole network state, which will increase the burden on the network, so the concept of path calculation element (PCE) is proposed. The PCE is responsible for routing and allocating resources in the network1. In the traditional band-switched optical network, the wavelength is used as the basic routing unit, resulting in relatively low wavelength utilization. Due to the limitation of wavelength continuity, the routing design of the band technology becomes complicated, which directly affects the utilization of the system. In this paper, optical code granularity is adopted. There is no continuity of the optical code, and the number of optical codes is more flexible than the wavelength. For the introduction of optical code switching, we propose a Code Group Routing Entity (CGRE) algorithm. In short, the combination of three-tier multi-granularity optical switching system and PCE can simplify the network structure, reduce the node load, and enhance the network scalability and survivability. Realize the intelligentization of optical network.

  2. Novel CMS lines in pigeonpea [Cajanus cajan (L. Millspaugh] derived from cytoplasmic substitutions, and their effective restoration and deployment in hybrid breeding

    Directory of Open Access Journals (Sweden)

    Abhishek Bohra

    2017-02-01

    Full Text Available The availability of stable cytoplasmic male sterile (CMS or A lines coupled with a robust restoration system (R lines is an essential prerequisite for efficient hybrid breeding. CMS-enabled hybrid technology holds immense potential to enhance the long-stagnant productivity of pigeonpea. In the present investigation, cytoplasmic substitutions were made in the nuclear backgrounds of early-maturing pigeonpea varieties or lines. Three new CMS lines (ICPL 88039A, Pusa 992A, and DPP 3-2A resulted from genetic crosses involving cytoplasmic donors from A2 (GT 288A and A4 (ICPA 2089 categories. In addition to visual inspection of anthers, pollen-staining techniques and scanning electron microscopy (SEM analysis were used to confirm pollen sterility. Further, given the relevance of the plant mitochondrial genome to CMS manifestation, 25 mitochondrion-specific DNA markers were assayed on these newly developed A lines and isogenic maintainer (B lines. DNA polymorphism between Pusa 992A and Pusa 992B as revealed by the nad7a_del marker confirmed the successful combination of sterilizing cytoplasm (A4 and nonrestoring nuclear background (Pusa 992. Such cytoplasm-specific DNA markers are required for A2-CMS as well. Further, to assess restoration ability, potential restorers were crossed with these CMS lines, and as a consequence, promising A × R combinations exhibiting 100% pollen fertility could be identified. In parallel, we also analyzed the inheritance patterns underlying fertility restoration using ICPL 88039A-derived F2 and BC1F1 populations, and established a monogenic dominant model to explain the phenomenon of A2-CMS restoration. In summary, we report the successful development of new CMS lines and describe their effective deployment in hybrid breeding of pigeonpea.

  3. Resilient Modulus Characterization of Alaskan Granular Base Materials

    Science.gov (United States)

    2010-08-01

    Resilient modulus (MR) of base course material is an important material input for : pavement design. In Alaska, due to distinctiveness of local climate, material source, : fines content and groundwater level, resilient properties of D-1 granular base...

  4. Non-spherical granular flows down inclined chutes

    NARCIS (Netherlands)

    Hidalgo, R.C.; Rubio-Largo, S.M.; Alonso-Marroquin, F.; Weinhart, T.

    2017-01-01

    In this work, we numerically examine the steady-state granular flow of 3D non-spherical particles down an inclined plane. We use a hybrid CPU/GPU implementation of the discrete element method of nonspherical elongated particles. Thus, a systematic study of the system response is performed varying

  5. Cytoplasmic Acidification and Secondary Metabolite Production in Different Plant Cell Suspensions (A Comparative Study).

    Science.gov (United States)

    Hagendoorn, MJM.; Wagner, A. M.; Segers, G.; Van Der Plas, LHW.; Oostdam, A.; Van Walraven, H. S.

    1994-10-01

    In this study, a correlation is described between low cytoplasmic pH, measured with the fluorescent probes 2[prime],7[prime]-bis-(2-carboxyethyl)-5-(and-6)-carboxyfluorescein (acetoxymethyl ester) and bis- [3-propyl-5-oxoisoxazol-4-yl]pentamethine oxonol, and the production of secondary metabolites for several plant cell-suspension systems. Anthraquinone production in Morinda citrifolia suspensions is negligible in the presence of 2,4-dichlorophenoxyacetic acid (2,4-D), whereas with naphthalene acetic acid (NAA) a significant accumulation is realized. NAA-grown cells showed a lower cytoplasmic pH than did 2,4-D-grown cells. Addition of 2,4-D or parachlorophenoxy acetic acid to NAA-grown cells resulted in an inhibition of anthraquinone production and an increase of the cytoplasmic pH, whereas addition of parachlorophenyl acetic acid had no effect on either parameter. Lignin production in Petunia hybrida cells could be induced by subculturing them in a medium without iron. These cells showed a lower cytoplasmic pH than control cells. Addition of Fe3+ led to a decreased lignin content and an increased cytoplasmic pH. Two cell lines of Linum flavum showed a different level of coniferin and lignin concentration in their cells. Cells that accumulated coniferin and lignin had a lower cytoplasmic pH than cells that did not accumulate these secondary metabolites. Apparently, in different species and after different kinds of treatment there is a correlation between acidification of the cytoplasm and the production of different secondary metabolites. The possible role of this acidification in secondary metabolite production is discussed.

  6. Adsorption of Volatile Organic Compounds from Aqueous Solution by Granular Activated Carbon in Batch System

    International Nuclear Information System (INIS)

    Zeinali, F.; Ghoreyshi, A. A.; Najafpour, G.

    2011-01-01

    Chlorinated hydrocarbons and aromatics are the major volatile organic compounds that contaminate the ground water and industrial waste waters. The best way to overcome this problem is to recover the dissolved compounds in water. In order to evaluate the potential ability of granular activated carbon for recovery of volatile organic compounds from water, the equilibrium adsorption was investigated. This study deals with the adsorption of dichloromethane as a typical chlorinated volatile organic compound and toluene as the representative of aromatic volatile organic compounds on a commercial granular activated carbon. The adsorption isotherms of these two volatile organic compounds on granular activated carbon were measured at three different temperatures, toluene at 293, 303 and 313 K and dichloromethane at 298, 303 and 313 K within their solubility concentration range in water. The maximum adsorption capacity of dichloromethane and toluene adsorption by granular activated carbon was 4 and 0.2 mol/Kg-1, respectively. The experimental data obtained were correlated with different adsorption isotherm models. The Langmuir model was well adapted to the description of dichloromethane adsorption on granular activated carbon at all three temperatures, while the adsorption of toluene on granular activated carbon was found to be well described by the Langmuir-BET hybrid model at all three temperatures. The heat of adsorption was also calculated based on the thermodynamic equation of Clausius Clapeyron, which indicates the adsorption process is endothermic for both compounds.

  7. Strain localisation in granular media

    OpenAIRE

    Desrues , Jacques

    1984-01-01

    This study is devoted to strain localisation in Granular materials. Both experimental and theoretical results have been obtained.The first part of the thesis is a review of the methods and theories about rupture in sols mechanics and more generally, in solid mechanics. The classical framework of Shear Band analysis is presented, and the main results available for different classes of materials are discussed.The second part describes an experimental study of strain localisation in sand specime...

  8. Relative Roles of Gap Junction Channels and Cytoplasm in Cell-to-Cell Diffusion of Fluorescent Tracers

    Science.gov (United States)

    Safranyos, Richard G. A.; Caveney, Stanley; Miller, James G.; Petersen, Nils O.

    1987-04-01

    Intercellular (tissue) diffusion of molecules requires cytoplasmic diffusion and diffusion through gap junctional (or cell-to-cell) channels. The rates of tissue and cytoplasmic diffusion of fluorescent tracers, expressed as an effective diffusion coefficient, De, and a cytoplasmic diffusion coefficient, Dcyt, have been measured among the developing epidermal cells of a larval beetle, Tenebrio molitor L., to determine the contribution of the junctional channels to intercellular diffusion. Tracer diffusion was measured by injecting fluorescent tracers into cells and quantitating the rate of subsequent spread into adjacent cells. Cytoplasmic diffusion was determined by fluorescence photobleaching. These experiments show that gap junctional channels constitute approximately 70-80% of the total cell-to-cell resistance to the diffusion of organic tracers at high concentrations in this tissue. At low concentrations, however, the binding of tracer to cytoplasm slows down the cytoplasmic diffusion, which may limit intercellular diffusion.

  9. Numerical Simulations of Granular Physics in the Solar System

    Science.gov (United States)

    Ballouz, Ronald

    2017-08-01

    Granular physics is a sub-discipline of physics that attempts to combine principles that have been developed for both solid-state physics and engineering (such as soil mechanics) with fluid dynamics in order to formulate a coherent theory for the description of granular materials, which are found in both terrestrial (e.g., earthquakes, landslides, and pharmaceuticals) and extra-terrestrial settings (e.g., asteroids surfaces, asteroid interiors, and planetary ring systems). In the case of our solar system, the growth of this sub-discipline has been key in helping to interpret the formation, structure, and evolution of both asteroids and planetary rings. It is difficult to develop a deterministic theory for granular materials due to the fact that granular systems are composed of a large number of elements that interact through a non-linear combination of various forces (mechanical, gravitational, and electrostatic, for example) leading to a high degree of stochasticity. Hence, we study these environments using an N-body code, pkdgrav, that is able to simulate the gravitational, collisional, and cohesive interactions of grains. Using pkdgrav, I have studied the size segregation on asteroid surfaces due to seismic shaking (the Brazil-nut effect), the interaction of the OSIRIS-REx asteroid sample-return mission sampling head, TAGSAM, with the surface of the asteroid Bennu, the collisional disruptions of rubble-pile asteroids, and the formation of structure in Saturn's rings. In all of these scenarios, I have found that the evolution of a granular system depends sensitively on the intrinsic properties of the individual grains (size, shape, sand surface roughness). For example, through our simulations, we have been able to determine relationships between regolith properties and the amount of surface penetration a spacecraft achieves upon landing. Furthermore, we have demonstrated that this relationship also depends on the strength of the local gravity. By comparing our

  10. Aerobic granular SBR systems applied to the treatment of industrial effluents

    International Nuclear Information System (INIS)

    Rio, V. del; Figueroa, M.; Arrojo, B.; Mosquera-Corral, A.; Campos, J. L.; Garcia-Torriello, G.; Mendez, R.

    2009-01-01

    Systems based on aerobic granular biomass are an alternative to the conventional activated sludge plants for wastewater treatment. Large organic and nitrogen loads are treated in these systems where biomass grown as granules, easy to separate by setting, make unnecessary the construction of secondary settler reducing the surface requirements for the treatment system construction. Furthermore, in aerobic granular reactors simultaneously carbon and nitrogen removal is feasible. These systems have been already applied at laboratory scale for the treatment of different types of industrial and urban wastewater. (Author)

  11. Aerobic granular SBR systems applied to the treatment of industrial effluents

    Energy Technology Data Exchange (ETDEWEB)

    Rio, V. del; Figueroa, M.; Arrojo, B.; Mosquera-Corral, A.; Campos, J. L.; Garcia-Torriello, G.; Mendez, R.

    2009-07-01

    Systems based on aerobic granular biomass are an alternative to the conventional activated sludge plants for wastewater treatment. Large organic and nitrogen loads are treated in these systems where biomass grown as granules, easy to separate by setting, make unnecessary the construction of secondary settler reducing the surface requirements for the treatment system construction. Furthermore, in aerobic granular reactors simultaneously carbon and nitrogen removal is feasible. These systems have been already applied at laboratory scale for the treatment of different types of industrial and urban wastewater. (Author)

  12. Measurements of Grain Motion in a Dense, Three-Dimensional Granular Fluid

    Science.gov (United States)

    Yang, Xiaoyu; Huan, Chao; Candela, D.; Mair, R. W.; Walsworth, R. L.

    2002-03-01

    We have used NMR to measure the short-time, three-dimensional displacement of grains in a system of mustard seeds vibrated vertically at 15g. The measurements are in the ballistic regime, giving direct access to the granular temperature profile. The data are compared to a recent hydrodynamic theory developed for high density granular flows. We find that the hydrodynamic theory works well for the dense, lower portion of the sample but breaks down near the free surface, where the mean free path becomes long.

  13. Immunolocalization of 7-2-ribonucleoprotein in the granular component of the nucleolus

    International Nuclear Information System (INIS)

    Reimer, G.; Raska, I.; Scheer, U.; Tan, E.M.

    1988-01-01

    Certain autoimmune sera contain antibodies against a nucleolar ribonucleotprotein particle associated with 7-2-RNA. In this study, the authors showed by immunofluorescence microscopy that antibodies reactive with 7-2-ribonucleoprotein immunolocalized in the granular regions of actinomycin D and 5,6-dichloro-1-β-D-ribofuranosylbenzimidazole (DRB)--segregated nucleoli from Vero cells. By electron microscopic immunocytochemistry, antigen-antibody complexes were located in the granular component of transcriptionally active nucleoli from rat liver hepatocytes and HeLa cells. Anti-7-2-RNP antibodies from two autoimmune sera immunoprecipitated a major protein of M r 40,000 from [ 35 S] methionine-labeled HeLa cell extract. The immunolocalization data suggest that 7-2-ribonucleoprotein may be involved in stages of ribosome biogenesis which take place in the granular component of the nucleolus, i.e., assembly, maturation, and/or transport of preribosomes

  14. Multi-granularity immunization strategy based on SIRS model in scale-free network

    Science.gov (United States)

    Nian, Fuzhong; Wang, Ke

    2015-04-01

    In this paper, a new immunization strategy was established to prevent the epidemic spreading based on the principle of "Multi-granularity" and "Pre-warning Mechanism", which send different pre-warning signal with the risk rank of the susceptible node to be infected. The pre-warning means there is a higher risk that the susceptible node is more likely to be infected. The multi-granularity means the susceptible node is linked with multi-infected nodes. In our model, the effect of the different situation of the multi-granularity immunizations is compared and different spreading rates are adopted to describe the epidemic behavior of nodes. In addition the threshold value of epidemic outbreak is investigated, which makes the result more convincing. The theoretical analysis and the simulations indicate that the proposed immunization strategy is effective and it is also economic and feasible.

  15. Discrete element modeling of triggered slip in faults with granular gouge: application to dynamic earthquake triggering

    International Nuclear Information System (INIS)

    Ferdowsi, B.

    2014-01-01

    Recent seismological observations based on new, more sensitive instrumentation show that seismic waves radiated from large earthquakes can trigger other earthquakes globally. This phenomenon is called dynamic earthquake triggering and is well-documented for over 30 of the largest earthquakes worldwide. Granular materials are at the core of mature earthquake faults and play a key role in fault triggering by exhibiting a rich nonlinear response to external perturbations. The stick-slip dynamics in sheared granular layers is analogous to the seismic cycle for earthquake fault systems. In this research effort, we characterize the macroscopic scale statistics and the grain-scale mechanisms of triggered slip in sheared granular layers. We model the granular fault gouge using three dimensional discrete element method simulations. The modeled granular system is put into stick-slip dynamics by applying a conning pressure and a shear load. The dynamic triggering is simulated by perturbing the spontaneous stick-slip dynamics using an external vibration applied to the boundary of the layer. The influences of the triggering consist in a frictional weakening during the vibration interval, a clock advance of the next expected large slip event and long term effects in the form of suppression and recovery of the energy released from the granular layer. Our study suggests that above a critical amplitude, vibration causes a significant clock advance of large slip events. We link this clock advance to a major decline in the slipping contact ratio as well as a decrease in shear modulus and weakening of the granular gouge layer. We also observe that shear vibration is less effective in perturbing the stick-slip dynamics of the granular layer. Our study suggests that in order to have an effective triggering, the input vibration must also explore the granular layer at length scales about or less than the average grain size. The energy suppression and the subsequent recovery and increased

  16. Electromagnetic response of a highly granular hadronic calorimeter

    Energy Technology Data Exchange (ETDEWEB)

    Adloff, C.; Blaha, J.; Blaising, J.J. [Savoie Univ., CNRS/IN2P3, Annecy-le-Vieux (FR). Lab. d' Annecy-le-Vieux de Physique des Particules] (and others)

    2010-12-15

    The CALICE collaboration is studying the design of high performance electromagnetic and hadronic calorimeters for future International Linear Collider detectors. For the hadronic calorimeter, one option is a highly granular sampling calorimeter with steel as absorber and scintillator layers as active material. High granularity is obtained by segmenting the scintillator into small tiles individually read out via silicon photo-multipliers (SiPM). A prototype has been built, consisting of thirty-eight sensitive layers, segmented into about eight thousand channels. In 2007 the prototype was exposed to positrons and hadrons using the CERN SPS beam, covering a wide range of beam energies and incidence angles. The challenge of cell equalization and calibration of such a large number of channels is best validated using electromagnetic processes. The response of the prototype steel-scintillator calorimeter, including linearity and uniformity, to electrons is investigated and described. (orig.)

  17. Electromagnetic response of a highly granular hadronic calorimeter

    International Nuclear Information System (INIS)

    Adloff, C.; Blaha, J.; Blaising, J.J.

    2010-12-01

    The CALICE collaboration is studying the design of high performance electromagnetic and hadronic calorimeters for future International Linear Collider detectors. For the hadronic calorimeter, one option is a highly granular sampling calorimeter with steel as absorber and scintillator layers as active material. High granularity is obtained by segmenting the scintillator into small tiles individually read out via silicon photo-multipliers (SiPM). A prototype has been built, consisting of thirty-eight sensitive layers, segmented into about eight thousand channels. In 2007 the prototype was exposed to positrons and hadrons using the CERN SPS beam, covering a wide range of beam energies and incidence angles. The challenge of cell equalization and calibration of such a large number of channels is best validated using electromagnetic processes. The response of the prototype steel-scintillator calorimeter, including linearity and uniformity, to electrons is investigated and described. (orig.)

  18. Genetic analysis of the cytoplasmic dynein subunit families.

    Science.gov (United States)

    Pfister, K Kevin; Shah, Paresh R; Hummerich, Holger; Russ, Andreas; Cotton, James; Annuar, Azlina Ahmad; King, Stephen M; Fisher, Elizabeth M C

    2006-01-01

    Cytoplasmic dyneins, the principal microtubule minus-end-directed motor proteins of the cell, are involved in many essential cellular processes. The major form of this enzyme is a complex of at least six protein subunits, and in mammals all but one of the subunits are encoded by at least two genes. Here we review current knowledge concerning the subunits, their interactions, and their functional roles as derived from biochemical and genetic analyses. We also carried out extensive database searches to look for new genes and to clarify anomalies in the databases. Our analysis documents evolutionary relationships among the dynein subunits of mammals and other model organisms, and sheds new light on the role of this diverse group of proteins, highlighting the existence of two cytoplasmic dynein complexes with distinct cellular roles.

  19. Genetic analysis of the cytoplasmic dynein subunit families.

    Directory of Open Access Journals (Sweden)

    K Kevin Pfister

    2006-01-01

    Full Text Available Cytoplasmic dyneins, the principal microtubule minus-end-directed motor proteins of the cell, are involved in many essential cellular processes. The major form of this enzyme is a complex of at least six protein subunits, and in mammals all but one of the subunits are encoded by at least two genes. Here we review current knowledge concerning the subunits, their interactions, and their functional roles as derived from biochemical and genetic analyses. We also carried out extensive database searches to look for new genes and to clarify anomalies in the databases. Our analysis documents evolutionary relationships among the dynein subunits of mammals and other model organisms, and sheds new light on the role of this diverse group of proteins, highlighting the existence of two cytoplasmic dynein complexes with distinct cellular roles.

  20. Activation of chromatin degradation by a protein factor of thymocyte cytoplasm of irradiated mice

    International Nuclear Information System (INIS)

    Soldatenkov, V.A.; Filippovich, I.V.

    1986-01-01

    A cytoplasmic thymocyte fraction isolated 1 h after irradiation of mice accelerates chromatin degradation in isolated nuclei. Treatment of the cytoplasmic fraction by heat and injection of cycloheximide to mice prevent the acceleration of DNA degradation. The analysis of the chromatin degradation products and the kinetics of this process at acid and alkaline pH shows that activation of DNA degradation in thymocytes by a factor obtained from the irradiated cell cytoplasm is specific for a Ca 2+ , Mg 2+ -dependent enzyme. The time- and dose-dependent parameters of the appearance in the thymocyte cytoplasm of the factor influencing degradation of chromatin are in a good agreement with both the time of the onset of its postirradiation degradation and the dose dependence of this process

  1. Large granular lymphocyte leukemia

    OpenAIRE

    Terra, Bruno; Maia, Amanda M.

    2010-01-01

    O presente estudo tem como objetivo o estabelecimento de fundamentação teórica atualizada baseada em revisão bibliográfica sobre a leucemia de grandes linfócitos granulares (LGLG), doença onco-hematológica, que, devido à sua relativa raridade, é pouco conhecida e subdiagnosticada. A LGLG é caracterizada pela proliferação clonal de linfócitos T ou NK na medula óssea e/ou no sangue periférico. Dentre as manifestações clínico-laboratoriais, podem ocorrer citopenias (anemia e/ou neutropenia e/ou ...

  2. Deposition and shaking of dry granular piles

    NARCIS (Netherlands)

    Hasan, M.

    2003-01-01

    A friction force model describing reversible stick-slip transition during contact has been developed with the special purpose to simulate the deposition of granular material. A test with a mass on a conveyor belt kept in position by a spring shows that a numerical simulation of the dynamics of such

  3. Factors influencing the density of aerobic granular sludge.

    NARCIS (Netherlands)

    Winkler, M.K.; Kleerebezem, R.; Strous, M.; Chandran, K.; Loosdrecht, M.C. van

    2013-01-01

    In the present study, the factors influencing density of granular sludge particles were evaluated. Granules consist of microbes, precipitates and of extracellular polymeric substance. The volume fractions of the bacterial layers were experimentally estimated by fluorescent in situ hybridisation

  4. High viscosity and anisotropy characterize the cytoplasm of fungal dormant stress resistant spores

    NARCIS (Netherlands)

    Dijksterhuis, J.; Nijsse, J.; Hoekstra, F.A.; Golovina, E.A.

    2007-01-01

    Ascospores of the fungus Talaromyces macrosporus are dormant and extremely stress resistant, whereas fungal conidia¿the main airborne vehicles of distribution¿are not. Here, physical parameters of the cytoplasm of these types of spores were compared. Cytoplasmic viscosity and level of anisotropy as

  5. Control of cytoplasmic and nuclear protein kinase A by phosphodiesterases and phosphatases in cardiac myocytes

    Science.gov (United States)

    Haj Slimane, Zeineb; Bedioune, Ibrahim; Lechêne, Patrick; Varin, Audrey; Lefebvre, Florence; Mateo, Philippe; Domergue-Dupont, Valérie; Dewenter, Matthias; Richter, Wito; Conti, Marco; El-Armouche, Ali; Zhang, Jin; Fischmeister, Rodolphe; Vandecasteele, Grégoire

    2014-01-01

    Aims The cAMP-dependent protein kinase (PKA) mediates β-adrenoceptor (β-AR) regulation of cardiac contraction and gene expression. Whereas PKA activity is well characterized in various subcellular compartments of adult cardiomyocytes, its regulation in the nucleus remains largely unknown. The aim of the present study was to compare the modalities of PKA regulation in the cytoplasm and nucleus of cardiomyocytes. Methods and results Cytoplasmic and nuclear cAMP and PKA activity were measured with targeted fluorescence resonance energy transfer probes in adult rat ventricular myocytes. β-AR stimulation with isoprenaline (Iso) led to fast cAMP elevation in both compartments, whereas PKA activity was fast in the cytoplasm but markedly slower in the nucleus. Iso was also more potent and efficient in activating cytoplasmic than nuclear PKA. Similar slow kinetics of nuclear PKA activation was observed upon adenylyl cyclase activation with L-858051 or phosphodiesterase (PDE) inhibition with 3-isobutyl-1-methylxantine. Consistently, pulse stimulation with Iso (15 s) maximally induced PKA and myosin-binding protein C phosphorylation in the cytoplasm, but marginally activated PKA and cAMP response element-binding protein phosphorylation in the nucleus. Inhibition of PDE4 or ablation of the Pde4d gene in mice prolonged cytoplasmic PKA activation and enhanced nuclear PKA responses. In the cytoplasm, phosphatase 1 (PP1) and 2A (PP2A) contributed to the termination of PKA responses, whereas only PP1 played a role in the nucleus. Conclusion Our study reveals a differential integration of cytoplasmic and nuclear PKA responses to β-AR stimulation in cardiac myocytes. This may have important implications in the physiological and pathological hypertrophic response to β-AR stimulation. PMID:24550350

  6. Cytoplasmic genetic variation and extensive cytonuclear interactions influence natural variation in the metabolome

    DEFF Research Database (Denmark)

    Joseph, Bindu; Corwin, Jason A.; Li, Baohua

    2013-01-01

    Understanding genome to phenotype linkages has been greatly enabled by genomic sequencing. However, most genome analysis is typically confined to the nuclear genome. We conducted a metabolomic QTL analysis on a reciprocal RIL population structured to examine how variation in the organelle genomes...... was a central hub in the epistatic network controlling the plant metabolome. This epistatic influence manifested such that the cytoplasmic background could alter or hide pairwise epistasis between nuclear loci. Thus, cytoplasmic genetic variation plays a central role in controlling natural variation...... in metabolomic networks. This suggests that cytoplasmic genomes must be included in any future analysis of natural variation....

  7. Spatial correlations in compressible granular flows

    OpenAIRE

    Van Noije, T. P. C.; Ernst, M. H.; Brito López, Ricardo

    1998-01-01

    The clustering instability in freely evolving granular fluids manifests itself in the density-density correlation function and structure factor. These functions are calculated from fluctuating hydrodynamics. As time increases, the structure factor of density fluctuations develops a maximum, which shifts to smaller wave numbers (growing correlation length). Furthermore, the inclusion of longitudinal velocity fluctuations changes long-range correlations in the flow field qualitatively and exten...

  8. Evaluation of cytoplasmic genetic effects for production and ...

    African Journals Online (AJOL)

    uvp

    2014-12-03

    Dec 3, 2014 ... Cytoplasmic genetic effects are transmitted directly only from mother to offspring through mitochondrial DNA. Normal genetic .... inheritance in three synthetic lines of beef cattle differing in mature size. J. Anim. Sci. 69, 745.

  9. Refractory disease in antineutrophil cytoplasmic antibodies associated vasculitis

    NARCIS (Netherlands)

    Rutgers, Abraham; Kallenberg, Cornelis

    Purpose of review Induction treatment of antineutrophil cytoplasmic antibodies (ANCA) associated vasculitis (AAV) is not always successful and nonresponding patients are considered refractory. Recent findings Refractory disease should be subdefined to the treatment that was received.

  10. Micro origins for macro behavior in granular media

    NARCIS (Netherlands)

    Zhao, J.; Jiang, M.; Soga, K.; Luding, Stefan

    2016-01-01

    We report the latest advances in understanding, characterization and modeling of key micro mechanisms and origins underpinning the interesting and complex macroscopic behavior of granular matter. Included in this Topical Collection are novel theories, innovative experimental tools and new numerical

  11. Granular filtration for airborne particles : correlation between experiments and models

    Energy Technology Data Exchange (ETDEWEB)

    Golshahi, L.; Tan, Z. [Calgary Univ., AB (Canada). Schulich School of Engineering, Mechanical and Manufacturing Dept.; Abedi, J. [Calgary Univ., AB (Canada). Schulich School of Engineering, Chemical and Petroleum Engineering Dept.

    2009-10-15

    A new design for a packed bed granular filter was presented. The cylindrical packed bed was designed to filter particles in the range of approximately 10 nm to 15 {mu}m in diameter in different kinetic conditions and configurations. The aim of the study was to develop a precise empirical model to predict the filtration efficiency of the packed beds. A collision-type atomizer was used to generate polydisperse sodium chloride aerosol particles. The effect of flow rates was studied using a thermal mass flow meter. A regression analysis technique was used to determine the correlation between single granule and total packed bed efficiency for the entire granular filter. The experimental data were then compared with results obtained from the theoretical analysis. The least square method was used to correlate experimental data and to develop generalized equations for single granule efficiency. The study showed that the granular filter media has a high filtration efficiency for both micron and submicron particles. It was concluded that the effect of media thickness was more significant at higher flow rates than at lower flow rates. 10 refs., 3 figs.

  12. Investigations on a hybrid positron source with a granular converter

    Energy Technology Data Exchange (ETDEWEB)

    Artru, X. [Institut de Physique Nucleaire de Lyon, Universite Lyon 1, CNRS/IN2P3, Villeurbanne (France); Chaikovska, I. [Laboratoire de l’Accelerateur Lineaire (LAL), Universite Paris-Sud, Bat. 200, 91898 Orsay (France); Chehab, R., E-mail: chehab@lal.in2p3.fr [Institut de Physique Nucleaire de Lyon, Universite Lyon 1, CNRS/IN2P3, Villeurbanne (France); Chevallier, M. [Institut de Physique Nucleaire de Lyon, Universite Lyon 1, CNRS/IN2P3, Villeurbanne (France); Dadoun, O. [Laboratoire de l’Accelerateur Lineaire (LAL), Universite Paris-Sud, Bat. 200, 91898 Orsay (France); Furukawa, K. [Accelerator Laboratory (KEK), Oho, Tsukuba, Ibaraki 305-0801 (Japan); Guler, H. [Laboratoire de l’Accelerateur Lineaire (LAL), Universite Paris-Sud, Bat. 200, 91898 Orsay (France); Kamitani, T.; Miyahara, F.; Satoh, M. [Accelerator Laboratory (KEK), Oho, Tsukuba, Ibaraki 305-0801 (Japan); Sievers, P. [CERN, Geneva (Switzerland); Suwada, T.; Umemori, K. [Accelerator Laboratory (KEK), Oho, Tsukuba, Ibaraki 305-0801 (Japan); Variola, A. [Laboratoire de l’Accelerateur Lineaire (LAL), Universite Paris-Sud, Bat. 200, 91898 Orsay (France)

    2015-07-15

    Promising results obtained with crystal targets for positron production led to the elaboration of a hybrid source made of an axially oriented tungsten crystal, as a radiator, and an amorphous tungsten converter. If the converter is granular, made of small spheres, the heat dissipation is greatly enhanced and the thermal shocks reduced, allowing the consideration of such device for the future linear colliders. A positron source of this kind is investigated. Previous simulations have shown very promising results for the yield as for the energy deposition and the PEDD (Peak Energy Deposition Density). Here, we present detailed simulations made in this granular converter with emphasis on the energy deposition density, which is a critical parameter as learned from the breakdown of the SLC target. A test on the KEKB linac is foreseen; it will allow a determination of the energy deposited and the PEDD in the converter through temperature measurements. Four granular converters, made of W spheres of mm radius have been built at LAL-Orsay; they will be installed at KEK and compared to compact converters. A description of the experimental layout at KEK is provided. Applications to future linear colliders as CLIC and ILC are considered.

  13. Revisiting Johnson and Jackson boundary conditions for granular flows

    Energy Technology Data Exchange (ETDEWEB)

    Li, Tingwen; Benyahia, Sofiane

    2012-07-01

    In this article, we revisit Johnson and Jackson boundary conditions for granular flows. The oblique collision between a particle and a flat wall is analyzed by adopting the classic rigid-body theory and a more realistic semianalytical model. Based on the kinetic granular theory, the input parameter for the partial-slip boundary conditions, specularity coefficient, which is not measurable in experiments, is then interpreted as a function of the particle-wall restitution coefficient, the frictional coefficient, and the normalized slip velocity at the wall. An analytical expression for the specularity coefficient is suggested for a flat, frictional surface with a low frictional coefficient. The procedure for determining the specularity coefficient for a more general problem is outlined, and a working approximation is provided.

  14. Granular compaction and stretched exponentials - Experiments and a numerical stochastic model

    Directory of Open Access Journals (Sweden)

    Nicolas Maxime

    2017-01-01

    Full Text Available We present a stochastic model to investigate the compaction kinetics of a granular material submitted to vibration. The model is compared to experimental results obtained with glass beads and with a cohesive powder. We also propose a physical interpretation of the characteristic time τ and the exponent β of the stretched exponential function widely used to represent the granular compaction kinetics, and we show that the characteristic time is proportional to the number of grains to move. The exponent β is expressed as a logarithmic compaction rate.

  15. Developing a Magnetic Resonance Imaging measurement of the forces within 3D granular materials under external loads

    Science.gov (United States)

    Elrington, Stefan; Bertrand, Thibault; Frey, Merideth; Shattuck, Mark; O'Hern, Corey; Barrett, Sean

    2014-03-01

    Granular materials are comprised of an ensemble of discrete macroscopic grains that interact with each other via highly dissipative forces. These materials are ubiquitous in our everyday life ranging in scale from the granular media that forms the Earth's crust to that used in agricultural and pharmaceutical industries. Granular materials exhibit complex behaviors that are poorly understood and cannot be easily described by statistical mechanics. Under external loads individual grains are jammed into place by a network of force chains. These networks have been imaged in quasi two-dimensional and on the outer surface of three-dimensional granular materials. Our goal is to use magnetic resonance imaging (MRI) to detect contact forces deep within three-dimensional granular materials, using hydrogen-1 relaxation times as a reporter for changes in local stress and strain. To this end, we use a novel pulse sequence to narrow the line width of hydrogen-1 in rubber. Here we present our progress to date, and prospects for future improvements.

  16. Nucleoporin Nup98 mediates galectin-3 nuclear-cytoplasmic trafficking

    Energy Technology Data Exchange (ETDEWEB)

    Funasaka, Tatsuyoshi, E-mail: funasaka@staff.kanazawa-u.ac.jp [Laboratory of Molecular and Cellular Biology, Department of Biology, Faculty of Natural Systems, Institute of Science and Engineering, Kanazawa University, Ishikawa (Japan); Balan, Vitaly; Raz, Avraham [Department of Oncology and Pathology, Karmanos Cancer Institute, Wayne State University, School of Medicine, Detroit, MI (United States); Wong, Richard W., E-mail: rwong@staff.kanazawa-u.ac.jp [Laboratory of Molecular and Cellular Biology, Department of Biology, Faculty of Natural Systems, Institute of Science and Engineering, Kanazawa University, Ishikawa (Japan); Bio-AFM Frontier Research Center, Kanazawa Kanazawa University, Ishikawa (Japan)

    2013-04-26

    Highlights: •Nuclear pore protein Nup98 is a novel binding partner of galectin-3. •Nup98 transports galectin-3 into cytoplasm. •Nup98 depletion leads to galectin-3 nuclear transport and induces growth retardation. •Nup98 may involve in ß-catenin pathway through interaction with galectin-3. -- Abstract: Nucleoporin Nup98 is a component of the nuclear pore complex, and is important in transport across the nuclear pore. Many studies implicate nucleoporin in cancer progression, but no direct mechanistic studies of its effect in cancer have been reported. We show here that Nup98 specifically regulates nucleus–cytoplasm transport of galectin-3, which is a ß-galactoside-binding protein that affects adhesion, migration, and cancer progression, and controls cell growth through the ß-catenin signaling pathway in cancer cells. Nup98 interacted with galectin-3 on the nuclear membrane, and promoted galectin-3 cytoplasmic translocation whereas other nucleoporins did not show these functions. Inversely, silencing of Nup98 expression by siRNA technique localized galectin-3 to the nucleus and retarded cell growth, which was rescued by Nup98 transfection. In addition, Nup98 RNA interference significantly suppressed downstream mRNA expression in the ß-catenin pathway, such as cyclin D1 and FRA-1, while nuclear galectin-3 binds to ß-catenin to inhibit transcriptional activity. Reduced expression of ß-catenin target genes is consistent with the Nup98 reduction and the galectin-3–nucleus translocation rate. Overall, the results show Nup98’s involvement in nuclear–cytoplasm translocation of galectin-3 and ß-catenin signaling pathway in regulating cell proliferation, and the results depicted here suggest a novel therapeutic target/modality for cancers.

  17. The Regeneration of Granular Activated Carbon Using Hydrothermal Technology

    National Research Council Canada - National Science Library

    Sufnarski, Michael

    1999-01-01

    The economic feasibility of using granular activated carbon (GAC) to remove organic contaminants from industrial and municipal wastewater is contingent upon its reuse during multiple adsorption-regeneration cycles (Van Vliet, 1991...

  18. The effect of an acoustic field on the filtration efficiency of aerosols by a granular bed

    International Nuclear Information System (INIS)

    Tavossi, H.

    1985-06-01

    A theoretical and an experimental study were developed in order to evaluate the parameters controlling the aerosol collection efficiency of a granular bed, i.e. all the chief collection mechanisms and the effect of acoustic waves on this efficiency. The action of acoustic waves of appropriate intensity and frequency increased the efficiency of the granular bed significantly for all aerosol sizes including those corresponding to the minimum efficiency. The theoretical prediction was verified by an experimental apparatus using a granular bed of glass of 2 mm diameter. Furthermore, our experimental results demonstrated the existence of a threshold in the acoustic intensity above which the collection efficiency of the granular bed increased rapidly. We also demonstrated a semi-empirical law relating acoustic capture efficiency of a spherical collector to frequency and acoustic intensity [fr

  19. Grain-scale numerical modeling of granular mechanics and fluid dynamics and application in a glacial context

    DEFF Research Database (Denmark)

    Damsgaard, Anders; Egholm, David Lundbek; Beem, Lucas H.

    The macroscopic behavior of granular materials is the result of the self-organizing complexity of the constituent grains. Granular materials are known for their ability to change phase, where each phase is characterized by distinct mechanical properties. This rich generic phenomenology has made...... it difficult to constrain generalized and adequate mathematical models for their mechanical behavior. Glaciers and ice streams often move by deformation of underlying melt-water saturated sediments. Glacier flow models including subglacial sediment deformation use simplified a priori assumptions for sediment......, the method imposes intense computational requirements on the computational time step. The majority of steps in the granular dynamics algorithm are massively parallel, which makes the DEM an obvious candidate for exploiting the capabilities of modern GPUs. The granular computations are coupled to a fluid...

  20. Comparative Laboratory and Numerical Simulations of Shearing Granular Fault Gouge: Micromechanical Processes

    Science.gov (United States)

    Morgan, J. K.; Marone, C. J.; Guo, Y.; Anthony, J. L.; Knuth, M. W.

    2004-12-01

    Laboratory studies of granular shear zones have provided significant insight into fault zone processes and the mechanics of earthquakes. The micromechanisms of granular deformation are more difficult to ascertain, but have been hypothesized based on known variations in boundary conditions, particle properties and geometries, and mechanical behavior. Numerical simulations using particle dynamics methods (PDM) can offer unique views into deforming granular shear zones, revealing the precise details of granular microstructures, particle interactions, and packings, which can be correlated with macroscopic mechanical behavior. Here, we describe a collaborative program of comparative laboratory and numerical experiments of granular shear using idealized materials, i.e., glass beads, glass rods or pasta, and angular sand. Both sets of experiments are carried out under similar initial and boundary conditions in a non-fracturing stress regime. Phenomenologically, the results of the two sets of experiments are very similar. Peak friction values vary as a function of particle dimensionality (1-D vs. 2-D vs. 3-D), particle angularity, particle size and size distributions, boundary roughness, and shear zone thickness. Fluctuations in shear strength during an experiment, i.e., stick-slip events, can be correlated with distinct changes in the nature, geometries, and durability of grain bridges that support the shear zone walls. Inclined grain bridges are observed to form, and to support increasing loads, during gradual increases in assemblage strength. Collapse of an individual grain bridge leads to distinct localization of strain, generating a rapidly propagating shear surface that cuts across multiple grain bridges, accounting for the sudden drop in strength. The distribution of particle sizes within an assemblage, along with boundary roughness and its periodicity, influence the rate of formation and dissipation of grain bridges, thereby controlling friction variations during

  1. Sub-optimal control of fuzzy linear dynamical systems under granular differentiability concept.

    Science.gov (United States)

    Mazandarani, Mehran; Pariz, Naser

    2018-05-01

    This paper deals with sub-optimal control of a fuzzy linear dynamical system. The aim is to keep the state variables of the fuzzy linear dynamical system close to zero in an optimal manner. In the fuzzy dynamical system, the fuzzy derivative is considered as the granular derivative; and all the coefficients and initial conditions can be uncertain. The criterion for assessing the optimality is regarded as a granular integral whose integrand is a quadratic function of the state variables and control inputs. Using the relative-distance-measure (RDM) fuzzy interval arithmetic and calculus of variations, the optimal control law is presented as the fuzzy state variables feedback. Since the optimal feedback gains are obtained as fuzzy functions, they need to be defuzzified. This will result in the sub-optimal control law. This paper also sheds light on the restrictions imposed by the approaches which are based on fuzzy standard interval arithmetic (FSIA), and use strongly generalized Hukuhara and generalized Hukuhara differentiability concepts for obtaining the optimal control law. The granular eigenvalues notion is also defined. Using an RLC circuit mathematical model, it is shown that, due to their unnatural behavior in the modeling phenomenon, the FSIA-based approaches may obtain some eigenvalues sets that might be different from the inherent eigenvalues set of the fuzzy dynamical system. This is, however, not the case with the approach proposed in this study. The notions of granular controllability and granular stabilizability of the fuzzy linear dynamical system are also presented in this paper. Moreover, a sub-optimal control for regulating a Boeing 747 in longitudinal direction with uncertain initial conditions and parameters is gained. In addition, an uncertain suspension system of one of the four wheels of a bus is regulated using the sub-optimal control introduced in this paper. Copyright © 2018 ISA. Published by Elsevier Ltd. All rights reserved.

  2. Treatment of old landfill leachate with high ammonium content using aerobic granular sludge.

    Science.gov (United States)

    Ren, Yanan; Ferraz, Fernanda; Kang, Abbass Jafari; Yuan, Qiuyan

    2017-01-01

    Aerobic granular sludge has become an attractive alternative to the conventional activated sludge due to its high settling velocity, compact structure, and higher tolerance to toxic substances and adverse conditions. Aerobic granular sludge process has been studied intensively in the treatment of municipal and industrial wastewater. However, information on leachate treatment using aerobic granular sludge is very limited. This study investigated the treatment performance of old landfill leachate with different levels of ammonium using two aerobic sequencing batch reactors (SBR): an activated sludge SBR (ASBR) and a granular sludge SBR (GSBR). Aerobic granules were successfully developed using old leachate with low ammonium concentration (136 mg L -1  NH 4 + -N). The GSBR obtained a stable chemical oxygen demand (COD) removal of 70% after 15 days of operation; while the ASBR required a start-up of at least 30 days and obtained unstable COD removal varying from 38 to 70%. Ammonium concentration was gradually increased in both reactors. Increasing influent ammonium concentration to 225 mg L -1  N, the GSBR removed 73 ± 8% of COD; while COD removal of the ASBR was 59 ± 9%. The GSBR was also more efficient than the ASBR for nitrogen removal. The granular sludge could adapt to the increasing concentrations of ammonium, achieving 95 ± 7% removal efficiency at a maximum influent concentration of 465 mg L -1  N. Ammonium removal of 96 ± 5% was obtained by the ASBR when it was fed with a maximum of 217 mg L -1  NH 4 + -N. However, the ASBR was partially inhibited by free-ammonia and nitrite accumulation rate increased up to 85%. Free-nitrous acid and the low biodegradability of organic carbon were likely the main factors affecting phosphorus removal. The results from this research suggested that aerobic granular sludge have advantage over activated sludge in leachate treatment.

  3. Amorphous areas in the cytoplasm of Dendrobium tepal cells

    Science.gov (United States)

    van Doorn, Wouter G.; Kirasak, Kanjana; Ketsa, Saichol

    2013-01-01

    In Dendrobium flowers some tepal mesophyll cells showed cytoplasmic areas devoid of large organelles. Such amorphous areas comprised up to about 40% of the cross-section of a cell. The areas were not bound by a membrane. The origin of these areas is not known. We show data suggesting that they can be formed from vesicle-like organelles. The data imply that these organelles and other material become degraded inside the cytoplasm. This can be regarded as a form of autophagy. The amorphous areas became surrounded by small vacuoles, vesicles or double membranes. These seemed to merge and thereby sequester the areas. Degradation of the amorphous areas therefore seemed to involve macroautophagy. PMID:23823702

  4. Excimer laser phototherapeutic keratectomy in conjunction with mitomycin C in corneal macular and granular dystrophies.

    Science.gov (United States)

    Yuksel, Erdem; Cubuk, Mehmet Ozgur; Eroglu, Hulya Yazıcı; Bilgihan, Kamil

    2016-04-01

    To evaluate the visual outcomes, recurrence patterns, safety, and efficacy of excimer laser phototherapeutic keratectomy (PTK) in conjunction with mitomycin C (MMC) for corneal macular and granular diystrophies. The patients were divided into two groups. Group 1 included patients with macular corneal dystrophy (MCD) that caused superficial corneal plaque opacities, and Group 2 included patients with granular corneal dystrophy (GCD). Patients in both groups were pre-, peri-, and postoperatively evaluated. The groups were compared in terms of uncorrected visual acuity (VA), best spectacle-corrected VA, presence of mild or significant recurrence, and time of recurrence. Eighteen eyes (nine with MCD and nine with GCD) of 18 patients (10 men and eight women) were included. PTK was performed for each eye that was included in this study. The mean ablation amount was 117.8 ± 24.4 µm and 83.5 ± 45.7 µm in MCD and GCD, respectively, (p=0.18). The postoperative improvement of the mean VA was similar between the two groups before recurrences (p>0.43) and after recurrences (p>0.71). There were no statistically significant differences in the recurrence rate and the recurrence-free period for any recurrence type. PTK was an effective, safe, and minimally invasive procedure for patients with MCD and GCD. PTK in conjunction with MMC was similarly effective for both groups in terms of recurrence and visual outcomes.

  5. Antineutrophil cytoplasm antibody: positivity and clinical correlation.

    Science.gov (United States)

    Martínez Téllez, Goitybell; Torres Rives, Bárbara; Rangel Velázquez, Suchiquil; Sánchez Rodríguez, Vicky; Ramos Ríos, María Antonia; Fuentes Smith, Lisset Evelyn

    2015-01-01

    To determine positivity and clinical correlation of anti-neutrophil cytoplasmic antibodies (ANCA), taking into account the interference of antinuclear antibodies (ANA). A prospective study was conducted in the Laboratory of Immunology of the National Cuban Center of Medical Genetic during one year. Two hounded sixty-seven patients with indication for ANCA determination were included. ANCA and ANA determinations with different cut off points and assays were determined by indirect immunofluorescense. Anti proteinase 3 and antimyeloperoxidase antibodies were determined by ELISA. Most positivity for ANCA was seen in patients with ANCA associated, primary small-vessel vasculitides, rheumatoid arthritis and systemic lupus erythematosus. Presence of ANCA without positivity for proteinase 3 and myeloperoxidase was higher in patients with ANA and little relation was observed between the perinuclear pattern confirmed in formalin and specificity by myeloperoxidase. Highest sensibility and specificity values for vasculitides diagnostic were achieved by ANCA determination using indirect immunofluorescense with a cut off 1/80 and confirming antigenic specificities with ELISA. ANCA can be present in a great number of chronic inflammatory or autoimmune disorders in the population studied. This determination using indirect immunofluorescence and following by ELISA had a great value for vasculitis diagnosis. Anti mieloperoxidasa assay has a higher utility than the formalin assay when ANA is present. Copyright © 2013 Elsevier España, S.L.U. All rights reserved.

  6. Editorial: Modelling and computational challenges in granular materials

    NARCIS (Netherlands)

    Weinhart, Thomas; Thornton, Anthony Richard; Einav, Itai

    2015-01-01

    This is the editorial for the special issue on “Modelling and computational challenges in granular materials” in the journal on Computational Particle Mechanics (CPM). The issue aims to provide an opportunity for physicists, engineers, applied mathematicians and computational scientists to discuss

  7. Experimental study and DEM simulation of granular flow through a new sphere discharge valve

    International Nuclear Information System (INIS)

    Zhang He; Li Tianjin; Huang Zhiyong; Gao Zhi; Qi Weiwei; Bo Hanliang

    2015-01-01

    Experiments and DEM simulation have been conducted to investigate the granular flow through a new type of sphere discharge valve. The new sphere discharge valve was based on the principle of angle of repose. The glass sphere was used in the granular discharge experiments. Experimental results showed that the relation between the averaging sphere discharge mass flow rate and the stroke of the sphere discharge valve were consisted of three zones, i.e. the idle stroke zone, linearly zone and orifice restriction zone. The Beverloo's law was suitable for the granular flow through multi-orifices in the orifice restriction zone. The variation of averaging sphere discharge mass flow rate with the stroke of the sphere discharge valve was described by Beverloo's law with the modification based on the stroke of the sphere discharge valve. DEM simulation results showed that the drained angle of repose during granular flow in the sphere storage vessel remained 23 degrees with different stroke of the sphere discharge valve. (authors)

  8. Cytoplasmic Skp2 expression is associated with p-Akt1 and predicts poor prognosis in human breast carcinomas.

    Directory of Open Access Journals (Sweden)

    Jing Liu

    Full Text Available BACKGROUND: S-phase kinase protein 2 (Skp2, an oncogenic protein, is a key regulator in different cellular and molecular processes, through ubiquitin-proteasome degradation pathway. Increased levels of Skp2 are observed in various types of cancer and associated with poor prognosis. However, in human breast carcinomas, the underlying mechanism and prognostic significance of cytoplasmic Skp2 is still undefined. METHODS: To investigate the role of cytoplasmic Skp2 expression in human breast carcinomas, we immnohistochemically assessed cytoplasmic Skp2, p-Akt1, and p27 expression in 251 patients with invasive ductal carcinomas of the breast. Association of cytoplasmic Skp2 expression with p-Akt1 and p27 was analyzed as well as correspondence with other clinicopathological parameters. Disease-free survival and overall survival were determined based on the Kaplan-Meier method and Cox regression models. RESULTS: Cytoplasmic of Skp2 was detected in 165 out of 251 (65.7% patients. Cytoplasmic Skp2 expression was associated with larger tumor size, more advanced histological grade, and positive HER2 expression. Increased cytoplasmic Skp2 expression correlated with p-Akt1 expression, with 54.2% (51/94 of low p-Akt1-expressing breast carcinomas, but 72.6% (114/157 of high p-Akt1-expressing breast carcinomas exhibiting cytoplasmic Skp2 expression. Elevated cytoplasmic Skp2 expression with low p-Akt1 expression was associated with poor disease-free and overall survival (DFS and OS, and Cox regression models demonstrated that cytoplasmic Skp2 expression was an independent prognostic marker for invasive breast carcinomas. CONCLUSION: Cytoplasmic Skp2 expression is associated with aggressive prognostic factors, such as larger tumor size, and advanced histological grade of the breast cancers. Results demonstrate that combined cytoplasmic Skp2 and p-Akt1 expression may be prognostic for patients with invasive breast carcinomas, and cytoplasmic Skp2 may serve as a

  9. Experimental Study of the Composition and Structure of Granular Media in the Shear Bands Based on the HHC-Granular Model

    Directory of Open Access Journals (Sweden)

    Guang-jin Wang

    2014-01-01

    Full Text Available The researchers cannot control the composition and structure of coarse grained soil in the indoor experiment because the granular particles of different size have the characteristics of random distribution and no sorting. Therefore, on the basis of the laboratory tests with the coarse grained soil, the HHC-Granular model, which could simulate the no sorting and random distribution of different size particles in the coarse-grained soil, was developed by use of cellular automata method. Meanwhile, the triaxial numerical simulation experiments of coarse grained soil were finished with the different composition and structure soil, and the variation of shear strength was discussed. The results showed that the internal friction angle was likely to reduce with the increasing of gravel contents in the coarse-grained soil, but the mean internal friction angle significantly increased with the increment of gravel contents. It indicated that the gravel contents of shear bands were the major factor affecting the shear strength.

  10. Double-layered perpendicular magnetic recording media of granular-type FePt-MgO films

    International Nuclear Information System (INIS)

    Zhang Zhengang; Singh, Amarendra K.; Yin Jinhua; Perumal, A.; Suzuki, Takao

    2005-01-01

    The recording performance of double-layered granular-type FePt-MgO perpendicular magnetic recording media fabricated onto glass discs by sputtering is investigated. The (0 0 1)-textured FePt granular films are obtained by annealing FePt/MgO multilayers. Three different multilayer structures are compared in their magnetic properties and recording SNR performances. To evaluate thermal stability property of these granular-type FePt disks, the time-dependent magnetic force microscope (MFM) signal from the written bits on one of these disks is recorded in the temperature range 25-200 degree sign C. The signal decay at high observation temperature is interpreted based on the temperature dependence of magnetic anisotropy (K u )

  11. Self-diffusion in dense granular shear flows.

    Science.gov (United States)

    Utter, Brian; Behringer, R P

    2004-03-01

    Diffusivity is a key quantity in describing velocity fluctuations in granular materials. These fluctuations are the basis of many thermodynamic and hydrodynamic models which aim to provide a statistical description of granular systems. We present experimental results on diffusivity in dense, granular shear flows in a two-dimensional Couette geometry. We find that self-diffusivities D are proportional to the local shear rate gamma; with diffusivities along the direction of the mean flow approximately twice as large as those in the perpendicular direction. The magnitude of the diffusivity is D approximately gamma;a(2), where a is the particle radius. However, the gradient in shear rate, coupling to the mean flow, and strong drag at the moving boundary lead to particle displacements that can appear subdiffusive or superdiffusive. In particular, diffusion appears to be superdiffusive along the mean flow direction due to Taylor dispersion effects and subdiffusive along the perpendicular direction due to the gradient in shear rate. The anisotropic force network leads to an additional anisotropy in the diffusivity that is a property of dense systems and has no obvious analog in rapid flows. Specifically, the diffusivity is suppressed along the direction of the strong force network. A simple random walk simulation reproduces the key features of the data, such as the apparent superdiffusive and subdiffusive behavior arising from the mean velocity field, confirming the underlying diffusive motion. The additional anisotropy is not observed in the simulation since the strong force network is not included. Examples of correlated motion, such as transient vortices, and Lévy flights are also observed. Although correlated motion creates velocity fields which are qualitatively different from collisional Brownian motion and can introduce nondiffusive effects, on average the system appears simply diffusive.

  12. Control of nuclear-cytoplasmic shuttling of Ankrd54 by PKCδ

    Institute of Scientific and Technical Information of China (English)

    Amy L Samuels; Alison Louw; Reza Zareie; Evan Ingley

    2017-01-01

    AIM To identify and characterize the effect of phosphorylation on the subcellular localization of Ankrd54.METHODS HEK293 T cells were treated with calyculin A, staurosporin or phorbol 12-myristate 13-acetate(PMA). Cells were transfected with eG FP-tagged Ankrd54 with or without Lyn tyrosine kinase(wild-type, Y397 F mutant, or Y508 F mutant). The subcellular localization was assessed by immunofluorescence imaging of cells, immunoblotting of subcellular fractionations. The phosphorylation of Ankrd54 was monitored using Phos-tagT M gel retardation. Phosphorylated peptides were analysed by multiplereaction-monitoring(MRM) proteomic analysis.RESULTS Activation of PKC kinases using PMA promoted nuclear export of Ankrd54 and correlated with increased Ankrd54 phosphorylation, assayed using Phos-tag TM gel retardation. Co-expression of an active form of the PKCδisoform specifically promoted both phosphorylation and cytoplasmic localization of Ankrd54, while PKCδ, Akt and PKA did not. Alanine mutation of several serine residues in the amino-terminal region of Ankrd54(Ser14, Ser17, Ser18, Ser19) reduced both PMA induced cytoplasmic localization and phosphorylation of Ankrd54. Using MRM proteomic analysis, phosphorylation of the Ser18 residue of Ankrd54 was readily detectable in response to PMA stimulation. PMA stimulation of cells co-expressing Ankrd54 and Lyn tyrosine kinase displayed increased coimmunoprecipitation and enhanced co-localization in the cytoplasm.CONCLUSION We identify phosphorylation by PKCδ as a major regulator of nuclear-cytoplasmic shuttling of Ankrd54, and its interaction with the tyrosine kinase Lyn.

  13. Dynamics of highly polydisperse colloidal suspensions as a model system for bacterial cytoplasm.

    Science.gov (United States)

    Hwang, Jiye; Kim, Jeongmin; Sung, Bong June

    2016-08-01

    There are various kinds of macromolecules in bacterial cell cytoplasm. The size polydispersity of the macromolecules is so significant that the crystallization and the phase separation could be suppressed, thus stabilizing the liquid state of bacterial cytoplasm. On the other hand, recent experiments suggested that the macromolecules in bacterial cytoplasm should exhibit glassy dynamics, which should be also affected significantly by the size polydispersity of the macromolecules. In this work, we investigate the anomalous and slow dynamics of highly polydisperse colloidal suspensions, of which size distribution is chosen to mimic Escherichia coli cytoplasm. We find from our Langevin dynamics simulations that the diffusion coefficient (D_{tot}) and the displacement distribution functions (P(r,t)) averaged over all colloids of different sizes do not show anomalous and glassy dynamic behaviors until the system volume fraction ϕ is increased up to 0.82. This indicates that the intrinsic polydispersity of bacterial cytoplasm should suppress the glass transition and help maintain the liquid state of the cytoplasm. On the other hand, colloids of each kind show totally different dynamic behaviors depending on their size. The dynamics of colloids of different size becomes non-Gaussian at a different range of ϕ, which suggests that a multistep glass transition should occur. The largest colloids undergo the glass transition at ϕ=0.65, while the glass transition does not occur for smaller colloids in our simulations even at the highest value of ϕ. We also investigate the distribution (P(θ,t)) of the relative angles of displacement for macromolecules and find that macromolecules undergo directionally correlated motions in a sufficiently dense system.

  14. Granular cell tumour of the urinary bladder

    Directory of Open Access Journals (Sweden)

    Christoph von Klot

    2012-04-01

    Full Text Available With only 16 cases reported in the literature, the mostly benign granular cell tumour of the urinary bladder is exceptionally rare. We present the case of a 68-year old patient with one of these lesions demonstrating our histological findings including several immunohistochemical stainings used to differentiate between other more common entities.

  15. Computational study on the behaviors of granular materials under mechanical cycling

    International Nuclear Information System (INIS)

    Wang, Xiaoliang; Ye, Minyou; Chen, Hongli

    2015-01-01

    Considering that fusion pebble beds are probably subjected to the cyclic compression excitation in their future applications, we presented a computational study to report the effect of mechanical cycling on the behaviors of granular matter. The correctness of our numerical experiments was confirmed by a comparison with the effective medium theory. Under the cyclic loads, the fast granular compaction was observed to evolve in a stretched exponential law. Besides, the increasing stiffening in packing structure, especially the decreasing moduli pressure dependence due to granular consolidation, was also observed. For the force chains inside the pebble beds, both the internal force distribution and the spatial distribution of force chains would become increasingly uniform as the external force perturbation proceeded and therefore produced the stress relief on grains. In this case, the originally proposed 3-parameter Mueth function was found to fail to describe the internal force distribution. Thereby, its improved functional form with 4 parameters was proposed here and proved to better fit the data. These findings will provide more detailed information on the pebble beds for the relevant fusion design and analysis

  16. Free Cooling of a Granular Gas of Rodlike Particles in Microgravity

    Science.gov (United States)

    Harth, Kirsten; Trittel, Torsten; Wegner, Sandra; Stannarius, Ralf

    2018-05-01

    Granular gases as dilute ensembles of particles in random motion are at the basis of elementary structure-forming processes in the Universe, involved in many industrial and natural phenomena, and also excellent models to study fundamental statistical dynamics. The essential difference to molecular gases is the energy dissipation in particle collisions. Its most striking manifestation is the so-called granular cooling, the gradual loss of mechanical energy E (t ) in the absence of external excitation. We report an experimental study of homogeneous cooling of three-dimensional granular gases in microgravity. The asymptotic scaling E (t )∝t-2 obtained by Haff's minimal model [J. Fluid Mech. 134, 401 (1983), 10.1017/S0022112083003419] proves to be robust, despite the violation of several of its central assumptions. The shape anisotropy of the grains influences the characteristic time of energy loss quantitatively but not qualitatively. We compare kinetic energies in the individual degrees of freedom and find a slight predominance of translational motions. In addition, we observe a preferred rod alignment in the flight direction, as known from active matter or animal flocks.

  17. Chronic malaria revealed by a new fluorescence pattern on the antinuclear autoantibodies test.

    Directory of Open Access Journals (Sweden)

    Benjamin Hommel

    Full Text Available BACKGROUND: Several clinical forms of malaria such as chronic carriage, gestational malaria or hyper-reactive malarial splenomegaly may follow a cryptic evolution with afebrile chronic fatigue sometimes accompanied by anemia and/or splenomegaly. Conventional parasitological tests are often negative or not performed, and severe complications may occur. Extensive explorations of these conditions often include the search for antinuclear autoantibodies (ANA. METHODS: We analysed fluorescence patterns in the ANA test in patients with either chronic cryptic or acute symptomatic malaria, then conducted a one-year prospective study at a single hospital on all available sera drawn for ANA detections. We then identified autoantibodies differentially expressed in malaria patients and in controls using human protein microarray. RESULTS: We uncovered and defined a new, malaria-related, nucleo-cytoplasmic ANA pattern displaying the specific association of a nuclear speckled pattern with diffuse cytoplasmic perinuclearly-enhanced fluorescence. In the one-year prospective analysis, 79% of sera displaying this new nucleo-cytoplasmic fluorescence were from patients with malaria. This specific pattern, not seen in other parasitic diseases, allowed a timely reorientation of the diagnosis toward malaria. To assess if the autoantibody immune response was due to autoreactivity or molecular mimicry we isolated 42 autoantigens, targets of malarial autoantibodies. BLAST analysis indicated that 23 of recognized autoantigens were homologous to plasmodial proteins suggesting autoimmune responses directly driven by the plasmodial infection. CONCLUSION: In patients with malaria in whom parasitological tests have not been performed recognition of this new, malaria-related fluorescence pattern on the ANA test is highly suggestive of the diagnosis and triggers immediate, easy confirmation and adapted therapy.

  18. Large granular lymphocytic leukaemia pathogenesis and management.

    Science.gov (United States)

    Dearden, Claire

    2011-02-01

    The WHO classification recognises three distinct disorders of large granular lymphocytes: T-cell large granular lymphocytic leukaemia (T-LGL), chronic lymphoproliferative disorders of NK-cells (CLPD-NK) and agressive NK-cell leukaemia. Despite the different cell of origin, there is considerable overlap between T-LGL and CLPD-NK in terms of clinical presentation and therapy. Many patients are asymptomatic and do not require treatment. Therapy, with immunosuppressant agents such as low dose methotrexate or ciclosporin, is usually indicated to correct cytopenias. In contrast, aggressive NK-cell leukaemia and the rare CD56(+) aggressive T-LGL leukaemia follow a fulminant clinical course, affect younger individuals and require more intensive combination chemotherapy followed by allogeneic stem cell transplant in eligible patients. The relative rarity of these disorders means that there have been few clinical trials to inform management. However, there is now considerable interest in the pathogenesis of the chronic LGL leukaemias and this has stimulated early trials to evaluate novel agents which target the dysregulated apoptotic pathways characteristic of this disease. © 2010 Blackwell Publishing Ltd.

  19. Ubiquitination of MBNL1 Is Required for Its Cytoplasmic Localization and Function in Promoting Neurite Outgrowth

    Directory of Open Access Journals (Sweden)

    Pei-Ying Wang

    2018-02-01

    Full Text Available The Muscleblind-like protein family (MBNL plays an important role in regulating the transition between differentiation and pluripotency and in the pathogenesis of myotonic dystrophy type 1 (DM1, a CTG expansion disorder. How different MBNL isoforms contribute to the differentiation and are affected in DM1 has not been investigated. Here, we show that the MBNL1 cytoplasmic, but not nuclear, isoform promotes neurite morphogenesis and reverses the morphological defects caused by expanded CUG RNA. Cytoplasmic MBNL1 is polyubiquitinated by lysine 63 (K63. Reduced cytoplasmic MBNL1 in the DM1 mouse brain is consistent with the reduced extent of K63 ubiquitination. Expanded CUG RNA induced the deubiqutination of cytoplasmic MBNL1, which resulted in nuclear translocation and morphological impairment that could be ameliorated by inhibiting K63-linked polyubiquitin chain degradation. Our results suggest that K63-linked ubiquitination of MBNL1 is required for its cytoplasmic localization and that deubiquitination of cytoplasmic MBNL1 is pathogenic in the DM1 brain.

  20. The transmission of cytoplasmic genes in Aspergillus nidulans

    NARCIS (Netherlands)

    Coenen, A.

    1997-01-01


    Introduction

    This manuscript concerns the spread of selfish cytoplasmic genes in the fungus Aspergillus nidulans. A.nidulans is a common soil fungus that grows vegetatively by forming a network (mycelium) of hyphae and reproduces

  1. Grad-type fourteen-moment theory for dilute granular gases

    Indian Academy of Sciences (India)

    2Department of Mathematics, Indian Institute of Technology Madras, Chennai 600 036, India ... practically no effect on Haff's law. ... Stokes, and Fourier (NSF) laws for dilute granular ...... and PS gratefully acknowledges financial support from.

  2. Mechanical Behavior of Granular/Particulate Media Reinforced with Fibers

    National Research Council Canada - National Science Library

    Michalowski, Radoslw

    1999-01-01

    ... out. This investigation was built on the results of a previous study. Fiber-reinforced granular material was considered as a composite, and a mathematical homogenization scheme was used to arrive at its macroscopic properties...

  3. Friction force regimes and the conditions for endless penetration of an intruder into a granular medium.

    Science.gov (United States)

    López-Rodríguez, L A; Pacheco-Vázquez, F

    2017-09-01

    An intruder penetrating into a granular column experiences a depth-dependent friction force F(z). Different regimes of F(z) have been measured depending on the experimental design: a nearly linear dependence for shallow penetrations, total saturation at large depths, and an exponential increase when the intruder approaches the bottom of the granular bed. We report here an experiment that allows us to measure the different regimes in a single run during the quasistatic descent of a sphere in a light granular medium. From the analysis of the resistance in the saturation zone, it was found that F(z) follows a cube-power-law dependence on the intruder diameter and an exponential increase with the packing fraction of the bed. Moreover, we determine the critical mass m_{c} required to observe infinite penetration and its dependence on the above parameters. Finally, we use our results to estimate the final penetration depth reached by intruders of masses mgranular bed) can sink indefinitely into the granular medium if the bed packing fraction is smaller than a critical value.

  4. The effect of ionizing irradiation on motion of cytoplasm in cells of Elodea canadensis

    International Nuclear Information System (INIS)

    Tordyiya, N.V.; Grodzyins'kij, D.M.; Danil'chenko, O.O.

    1999-01-01

    The effect of acute irradiation on the velocity of cytoplasm is investigated. It is shown that, for small doses, there is a strong nonlinearity between the velocity of cytoplasm and dose. The nonlinear behavior disappears with increasing a dose

  5. Sinking a Granular Raft

    Science.gov (United States)

    Protière, Suzie; Josserand, Christophe; Aristoff, Jeffrey M.; Stone, Howard A.; Abkarian, Manouk

    2017-03-01

    We report experiments that yield new insights on the behavior of granular rafts at an oil-water interface. We show that these particle aggregates can float or sink depending on dimensionless parameters taking into account the particle densities and size and the densities of the two fluids. We characterize the raft shape and stability and propose a model to predict its shape and maximum length to remain afloat. Finally we find that wrinkles and folds appear along the raft due to compression by its own weight, which can trigger destabilization. These features are characteristics of an elastic instability, which we discuss, including the limitations of our model.

  6. Effective Wall Friction in Wall-Bounded 3D Dense Granular Flows.

    Science.gov (United States)

    Artoni, Riccardo; Richard, Patrick

    2015-10-09

    We report numerical simulations on granular shear flows confined between two flat but frictional sidewalls. Novel regimes differing by their strain localization features are observed. They originate from the competition between dissipation at the sidewalls and dissipation in the bulk of the flow. The effective friction at sidewalls is characterized (effective friction coefficient and orientation of the friction force) for each regime, and its interdependence with slip and force fluctuations is pointed out. We propose a simple scaling law linking the slip velocity to the granular temperature in the main flow direction which leads naturally to another scaling law for the effective friction.

  7. Distribution pattern assessment of a dual-purpose disc agrochemical applicator for field crops

    Directory of Open Access Journals (Sweden)

    M. S. Abubakar

    2012-08-01

    Full Text Available A dual-purpose disc agrochemical applicator for field crops was developed to boost agricultural mechanization in crop production and also to overcome the safety concern of hazardous spray drift during agrochemical application by the field crop farmers. The dual purpose agrochemical applicator was mounted on a high clearance tractor and tested with respect to the granular fertilizer distribution patterns uniformity/liquid chemical uniformity of droplet sizes in spraying of the agrochemical. Results for NPK granular chemical indicated that, at low (50 kg/ha and high (150 kg/ha application rates with 550 rpm disc speed, distribution patterns skewed to the left whereas the distribution pattern at medium (100 kg/ha application rates was good flattop. Also at high application rate with 1000 rpm disc speed, mean distribution pattern became poor (W-shape. For the liquid chemical herbicide HC 48 amine liquid, the mean values of volume median diameter (VMD and number median diameter (NMD were 108 µm and 80 µm at 90 lt/ha application rate at 5000 rpm rotary disc speed, and also 344 and 222 µm at 30 lt/ha application rate with 2000 rpm rotary disc speed. The mean values of coefficient of uniformity for droplet sizes expressed as VMD/NMD found in this study were in the range of 1.35 to 1.55 for HC amine 48 liquid chemical.

  8. Tsunamis generated by unconfined deformable granular landslides in various topographic configurations

    Science.gov (United States)

    McFall, B. C.; Mohammed, F.; Fritz, H. M.

    2012-04-01

    Tsunamis generated by landslides and volcanic island collapses account for some of the most catastrophic events. Major tsunamis caused by landslides or volcanic island collapse were recorded at Krakatoa in 1883, Grand Banks, Newfoundland in 1929, Lituya Bay, Alaska in 1958, Papua New Guinea in 1998, and Java in 2006. Source and runup scenarios based on real world events are physically modeled in the three dimensional NEES tsunami wave basin (TWB) at Oregon State University (OSU). A novel pneumatic landslide tsunami generator (LTG) was deployed to simulate landslides with varying geometry and kinematics. The LTG consists of a sliding box filled with up to 1,350 kg of naturally rounded river gravel which is accelerated by means of four pneumatic pistons down the 2H: 1V slope, launching the granular landslide towards the water at velocities of up to 5 m/s. Topographical and bathymetric features can greatly affect wave characteristics and runup heights. Landslide tsunamis are studied in different topographic and bathymetric configurations: far field propagation and runup, a narrow fjord and curved headland configurations, and a conical island setting representing landslides off an island or a volcanic flank collapse. Water surface elevations were measured using an array of resistance wave gauges. The granulate landslide width, thickness and front velocity were measured using above and underwater cameras. Landslide 3-dimensional surface reconstruction and surface velocity properties were measured using a stereo particle image velocimetry (PIV) setup. The speckled pattern on the surface of the granular landslide allows for cross-correlation based PIV analysis. Wave runup was measured with resistance wave gauges along the slope and verified with video image processing. The measured landslide and tsunami data serve to validate and advance 3-dimensional numerical landslide tsunami and prediction models.

  9. Characterizing granular networks using topological metrics

    Science.gov (United States)

    Dijksman, Joshua A.; Kovalcinova, Lenka; Ren, Jie; Behringer, Robert P.; Kramar, Miroslav; Mischaikow, Konstantin; Kondic, Lou

    2018-04-01

    We carry out a direct comparison of experimental and numerical realizations of the exact same granular system as it undergoes shear jamming. We adjust the numerical methods used to optimally represent the experimental settings and outcomes up to microscopic contact force dynamics. Measures presented here range from microscopic through mesoscopic to systemwide characteristics of the system. Topological properties of the mesoscopic force networks provide a key link between microscales and macroscales. We report two main findings: (1) The number of particles in the packing that have at least two contacts is a good predictor for the mechanical state of the system, regardless of strain history and packing density. All measures explored in both experiments and numerics, including stress-tensor-derived measures and contact numbers depend in a universal manner on the fraction of nonrattler particles, fNR. (2) The force network topology also tends to show this universality, yet the shape of the master curve depends much more on the details of the numerical simulations. In particular we show that adding force noise to the numerical data set can significantly alter the topological features in the data. We conclude that both fNR and topological metrics are useful measures to consider when quantifying the state of a granular system.

  10. Enhanced adsorption of perfluorooctane sulfonate and perfluorooctanoate by bamboo-derived granular activated carbon.

    Science.gov (United States)

    Deng, Shubo; Nie, Yao; Du, Ziwen; Huang, Qian; Meng, Pingping; Wang, Bin; Huang, Jun; Yu, Gang

    2015-01-23

    A bamboo-derived granular activated carbon with large pores was successfully prepared by KOH activation, and used to remove perfluorooctane sulfonate (PFOS) and perfluorooctanoate (PFOA) from aqueous solution. The granular activated carbon prepared at the KOH/C mass ratio of 4 and activation temperature of 900°C had fast and high adsorption for PFOS and PFOA. Their adsorption equilibrium was achieved within 24h, which was attributed to their fast diffusion in the micron-sized pores of activated carbon. This granular activated carbon exhibited the maximum adsorbed amount of 2.32mmol/g for PFOS and 1.15mmol/g for PFOA at pH 5.0, much higher than other granular and powdered activated carbons reported. The activated carbon prepared under the severe activation condition contained many enlarged pores, favorable for the adsorption of PFOS and PFOA. In addition, the spent activated carbon was hardly regenerated in NaOH/NaCl solution, while the regeneration efficiency was significantly enhanced in hot water and methanol/ethanol solution, indicating that hydrophobic interaction was mainly responsible for the adsorption. The regeneration percent was up to 98% using 50% ethanol solution at 45°C. Copyright © 2014 Elsevier B.V. All rights reserved.

  11. Self-organized magnetic particles to tune the mechanical behavior of a granular system

    Science.gov (United States)

    Cox, Meredith; Wang, Dong; Barés, Jonathan; Behringer, Robert P.

    2016-09-01

    Above a certain density a granular material jams. This property can be controlled by either tuning a global property, such as the packing fraction or by applying shear strain, or at the micro-scale by tuning grain shape, inter-particle friction or externally controlled organization. Here, we introduce a novel way to change a local granular property by adding a weak anisotropic magnetic interaction between particles. We measure the evolution of the pressure, P, and coordination number, Z, for a packing of 2D photo-elastic disks, subject to uniaxial compression. A fraction R m of the particles have embedded cuboidal magnets. The strength of the magnetic interactions between particles is too weak to have a strong direct effect on P or Z when the system is jammed. However, the magnetic interactions play an important role in the evolution of latent force networks when systems containing a large enough fraction of the particles with magnets are driven through unjammed to jammed states. In this case, a statistically stable network of magnetic chains self-organizes before jamming and overlaps with force chains once jamming occurs, strengthening the granular medium. This property opens a novel way to control mechanical properties of granular materials.

  12. On the rheology of dilative granular media: Bridging solid- and fluid-like behavior

    Science.gov (United States)

    Andrade, José E.; Chen, Qiushi; Le, Phong H.; Avila, Carlos F.; Matthew Evans, T.

    2012-06-01

    A new rate-dependent plasticity model for dilative granular media is presented, aiming to bridge the seemingly disparate solid- and fluid-like behavioral regimes. Up to date, solid-like behavior is typically tackled with rate-independent plasticity models emanating from Mohr-Coulomb and Critical State plasticity theory. On the other hand, the fluid-like behavior of granular media is typically treated using constitutive theories amenable to viscous flow, e.g., Bingham fluid. In our proposed model, the material strength is composed of a dilation part and a rate-dependent residual strength. The dilatancy strength plays a key role during solid-like behavior but vanishes in the fluid-like regime. The residual strength, which in a classical plasticity model is considered constant and rate-independent, is postulated to evolve with strain rate. The main appeal of the model is its simplicity and its ability to reconcile the classic plasticity and rheology camps. The applicability and capability of the model are demonstrated by numerical simulation of granular flow problems, as well as a classical shear banding problem, where the performance of the continuum model is compared to discrete particle simulations and physical experiment. These results shed much-needed light onto the mechanics and physics of granular media at various shear rates.

  13. Preparation of regenerable granular carbon nanotubes by a simple heating-filtration method for efficient removal of typical pharmaceuticals

    Science.gov (United States)

    Shan, Danna; Deng, Shubo; Zhao, Tianning; Yu, Gang; Winglee, Judith; Wiesner, Mark R.

    2017-04-01

    A simple and convenient method was used to prepare novel granular carbon nanotubes (CNTs) for enhanced adsorption of pharmaceuticals. By heating CNTs powder at 450 degree centigrade in air, followed by filtration, the obtained granular adsorbent exhibited high surface area and pore volume since the heating process produced some oxygen-containing functional groups on CNT surface, making CNTs more dispersible in the formation of granular cake. The porous granular CNTs not only had more available surfaces for adsorption but also were more easily separated from solution than pristine CNTs (p-CNTs) powder. This adsorbent exhibited relatively fast adsorption for carbamazepine (CBZ), tetracycline (TC) and diclofe- nac sodium (DS), and the maximum adsorption capacity on the granular CNTs was 369.5 μmol/g for CBZ, 284.2 μmol/g for TC and 203.1 μmol/g for DS according to the Langmuir fitting, increasing by 42.4%, 37.8% and 38.0% in comparison with the pristine CNTs powder. Moreover, the spent granular CNTs were successfully regenerated at 400 degree centigrade in air without decreasing the adsorption capacity in five regeneration cycles. The adsorbed CBZ and DS were completely degraded, while the adsorbed TC was partially oxidized and the residual was favorable for the subsequent adsorption. This research develops an easy method to prepare and regenerate granular CNT adsorbent for the enhanced removal of organic pollutants from water or wastewater.

  14. Deformación permanente de materiales granulares en pavimentos flexibles: estado del conocimiento Permanent strain of granular materials in flexible pavements: state of the art

    Directory of Open Access Journals (Sweden)

    Hugo Alexánder Rondón

    2009-01-01

    Full Text Available Diversos estudios han sido desarrollados en el área de los pavimentos para comprender el comportamiento elastoplástico que experimentan materiales granulares bajo carga cíclica. Este es el segundo de dos artículos que presentan el estado del conocimiento de investigaciones desarrolladas en esta área. Basado en una amplia revisión bibliográfica, este artículo da cuenta de la forma como ha sido estudiado el fenómeno de deformación permanente en materiales granulares empleados para conformar capas de base y sub-base de estructuras de pavimentos flexibles. Además, se exponen y se discuten los factores que afectan la resistencia a la deformación permanente y la evolución de las ecuaciones matemáticas desarrolladas para predecir la deformación que experimentan estos materiales bajo carga cíclica. Un estado del conocimiento sobre el comportamiento resiliente de estos materiales es presentado en el primer artículo (Rondón y Reyes, 2007.Several studies have been conducted in pavement field for trying to understand the elastoplastic behavior experienced by granular materials under a cyclic load. This is the second out of two articles which show state-of-the-art of researches conducted in this field. Based on a wide literature review, this article accounts for the way how permanent strain phenomenon has been studied in granular materials used for creating base and sub-base layers of flexible pavement structures. Besides, this article displays and discusses factors which affect resistance to permanent strain and evolution of mathematical equations developed for predicting that strain experienced by these materials under a cyclic load. A state-of-the-art about resilient behavior of these materials has been presented in the first article (Rondón and Reyes, 2007.

  15. Hydrodynamic flow in the cytoplasm of plant cells.

    NARCIS (Netherlands)

    Esseling-Ozdoba, A.; Houtman, D.; Lammeren, A.A. van; Eiser, E.; Emons, A.M.C.

    2008-01-01

    Plant cells show myosin-driven organelle movement, called cytoplasmic streaming. Soluble molecules, such as metabolites do not move with motor proteins but by diffusion. However, is all of this streaming active motor-driven organelle transport? Our recent simulation study (Houtman et al., 2007)

  16. Hydrodynamic flow in the cytoplasm of plant cells

    NARCIS (Netherlands)

    Esseling-Ozdoba, A.; Houtman, D.; van Lammeren, A.A.M.; Eiser, E.; Emons, A.M.C.

    2008-01-01

    Plant cells show myosin-driven organelle movement, called cytoplasmic streaming. Soluble molecules, such as metabolites do not move with motor proteins but by diffusion. However, is all of this streaming active motor-driven organelle transport? Our recent simulation study (Houtman et al., 2007)

  17. Hydrodynamic flow in the cytoplasm of plant cells

    NARCIS (Netherlands)

    Esseling-Ozdoba, A.; Houtman, D.; Lammeren, van A.A.M.; Eiser, E.; Emons, A.M.C.

    2008-01-01

    Plant cells show myosin-driven organelle movement, called cytoplasmic streaming. Soluble molecules, such as metabolites do not move with motor proteins but by diffusion. However, is all of this streaming active motor-driven organelle transport? Our recent simulation study ( Houtman et al., 2007 )

  18. The poly(rC)-binding protein αCP2 is a noncanonical factor in X. laevis cytoplasmic polyadenylation

    Science.gov (United States)

    Vishnu, Melanie R.; Sumaroka, Marina; Klein, Peter S.; Liebhaber, Stephen A.

    2011-01-01

    Post-transcriptional control of mRNA stability and translation is central to multiple developmental pathways. This control can be linked to cytoplasmic polyadenylation in certain settings. In maturing Xenopus oocytes, specific mRNAs are targeted for polyadenylation via recruitment of the Cytoplasmic Polyadenylation Element (CPE) binding protein (CPEB) to CPE(s) within the 3′ UTR. Cytoplasmic polyadenylation is also critical to early embryonic events, although corresponding determinants are less defined. Here, we demonstrate that the Xenopus ortholog of the poly(rC) binding protein αCP2 can recruit cytoplasmic poly(A) polymerase activity to mRNAs in Xenopus post-fertilization embryos, and that this recruitment relies on cis sequences recognized by αCP2. We find that the hα-globin 3′ UTR, a validated mammalian αCP2 target, constitutes an effective target for cytoplasmic polyadenylation in Xenopus embryos, but not during Xenopus oocyte maturation. We further demonstrate that the cytoplasmic polyadenylation activity is dependent on the action of the C-rich αCP-binding site in conjunction with the adjacent AAUAAA. Consistent with its ability to target mRNA for poly(A) addition, we find that XαCP2 associates with core components of the Xenopus cytoplasmic polyadenylation complex, including the cytoplasmic poly(A) polymerase XGLD2. Furthermore, we observe that the C-rich αCP-binding site can robustly enhance the activity of a weak canonical oocyte maturation CPE in early embryos, possibly via a direct interaction between XαCP2 and CPEB1. These studies establish XαCP2 as a novel cytoplasmic polyadenylation trans factor, indicate that C-rich sequences can function as noncanonical cytoplasmic polyadenylation elements, and expand our understanding of the complexities underlying cytoplasmic polyadenylation in specific developmental settings. PMID:21444632

  19. Conformational alterations resulting from mutations in cytoplasmic domains of the alpha subunit of the Na,K-ATPase

    DEFF Research Database (Denmark)

    Blostein, R; Daly, S E; MacAulay, Nanna

    1998-01-01

    This paper summarizes experiments concerned with the functional consequences of mutations in cytoplasmic regions of the alpha 1 subunit of the Na,K-ATPase, in particular the amino terminus, the first cytoplasmic loop between transmembrane segments M2 and M3, and the major cytoplasmic loop between...

  20. Useful Pattern Mining on Time Series

    DEFF Research Database (Denmark)

    Goumatianos, Nikitas; Christou, Ioannis T; Lindgren, Peter

    2013-01-01

    We present the architecture of a “useful pattern” mining system that is capable of detecting thousands of different candlestick sequence patterns at the tick or any higher granularity levels. The system architecture is highly distributed and performs most of its highly compute-intensive aggregation...... calculations as complex but efficient distributed SQL queries on the relational databases that store the time-series. We present initial results from mining all frequent candlestick sequences with the characteristic property that when they occur then, with an average at least 60% probability, they signal a 2...