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Sample records for geometric morphometric approach

  1. Symmetry analysis of talus bone: A Geometric morphometric approach.

    Science.gov (United States)

    Islam, K; Dobbe, A; Komeili, A; Duke, K; El-Rich, M; Dhillon, S; Adeeb, S; Jomha, N M

    2014-01-01

    The main object of this study was to use a geometric morphometric approach to quantify the left-right symmetry of talus bones. Analysis was carried out using CT scan images of 11 pairs of intact tali. Two important geometric parameters, volume and surface area, were quantified for left and right talus bones. The geometric shape variations between the right and left talus bones were also measured using deviation analysis. Furthermore, location of asymmetry in the geometric shapes were identified. Numerical results showed that talus bones are bilaterally symmetrical in nature, and the difference between the surface area of the left and right talus bones was less than 7.5%. Similarly, the difference in the volume of both bones was less than 7.5%. Results of the three-dimensional (3D) deviation analyses demonstrated the mean deviation between left and right talus bones were in the range of -0.74 mm to 0.62 mm. It was observed that in eight of 11 subjects, the deviation in symmetry occurred in regions that are clinically less important during talus surgery. We conclude that left and right talus bones of intact human ankle joints show a strong degree of symmetry. The results of this study may have significance with respect to talus surgery, and in investigating traumatic talus injury where the geometric shape of the contralateral talus can be used as control. Cite this article: Bone Joint Res 2014;3:139-45.

  2. Shaping up: a geometric morphometric approach to assemblage ecomorphology.

    Science.gov (United States)

    Bower, L M; Piller, K R

    2015-09-01

    This study adopts an ecomorphological approach to test the utility of body shape as a predictor of niche relationships among a stream fish assemblage of the Tickfaw River (Lake Pontchartrain Basin) in southeastern Louisiana, U.S.A. To examine the potential influence of evolutionary constraints, analyses were performed with and without the influence of phylogeny. Fish assemblages were sampled throughout the year, and ecological data (habitat and tropic guild) and body shape (geometric morphometric) data were collected for each fish specimen. Multivariate analyses were performed to examine relationships and differences between body shape and ecological data. Results indicate that a relationship exists between body shape and trophic guild as well as flow regime, but no significant correlation between body shape and substratum was found. Body shape was a reliable indicator of position within assemblage niche space. © 2015 The Fisheries Society of the British Isles.

  3. Linear versus geometric morphometric approaches for the analysis of head shape dimorphism in lizards.

    Science.gov (United States)

    Fabre, Anne-Claire; Cornette, Raphäel; Huyghe, Katleen; Andrade, Denis V; Herrel, Anthony

    2014-09-01

    Differences between the sexes may arise because of differences in reproductive strategy, with females investing more in traits related to reproductive output and males investing more in traits related to resource holding capacity and territory defence. Sexual dimorphism is widespread in lizards and in many species males and females also differ in head shape. Males typically have bigger heads than females resulting in intersexual differences in bite force. Whereas most studies documenting differences in head dimensions between sexes use linear dimensions, the use of geometric morphometrics has been advocated as more appropriate to characterize such differences. This method may allow the characterization of local shape differences that may have functional consequences, and provides unbiased indicators of shape. Here, we explore whether the two approaches provide similar results in an analyses of head shape in Tupinambis merianae. The Argentine black and white tegu differs dramatically in body size, head size, and bite force between the sexes. However, whether the intersexual differences in bite force are simply the result of differences in head size or whether more subtle modifications (e.g., in muscle insertion areas) are involved remains currently unknown. Based on the crania and mandibles of 19 lizards with known bite force, we show intersexual differences in the shape of the cranium and mandible using both linear and geometric morphometric approaches. Although both types of analyses showed generally similar results for the mandible, this was not the case for the cranium. Geometric morphometric approaches provided better insights into the underlying functional relationships between the cranium and the jaw musculature, as illustrated by shape differences in muscle insertion areas not detected using linear morphometric data. © 2014 Wiley Periodicals, Inc.

  4. Bat Species Comparisons Based on External Morphology: A Test of Traditional versus Geometric Morphometric Approaches.

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    Schmieder, Daniela A; Benítez, Hugo A; Borissov, Ivailo M; Fruciano, Carmelo

    2015-01-01

    External morphology is commonly used to identify bats as well as to investigate flight and foraging behavior, typically relying on simple length and area measures or ratios. However, geometric morphometrics is increasingly used in the biological sciences to analyse variation in shape and discriminate among species and populations. Here we compare the ability of traditional versus geometric morphometric methods in discriminating between closely related bat species--in this case European horseshoe bats (Rhinolophidae, Chiroptera)--based on morphology of the wing, body and tail. In addition to comparing morphometric methods, we used geometric morphometrics to detect interspecies differences as shape changes. Geometric morphometrics yielded improved species discrimination relative to traditional methods. The predicted shape for the variation along the between group principal components revealed that the largest differences between species lay in the extent to which the wing reaches in the direction of the head. This strong trend in interspecific shape variation is associated with size, which we interpret as an evolutionary allometry pattern.

  5. Bat Species Comparisons Based on External Morphology: A Test of Traditional versus Geometric Morphometric Approaches.

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    Daniela A Schmieder

    Full Text Available External morphology is commonly used to identify bats as well as to investigate flight and foraging behavior, typically relying on simple length and area measures or ratios. However, geometric morphometrics is increasingly used in the biological sciences to analyse variation in shape and discriminate among species and populations. Here we compare the ability of traditional versus geometric morphometric methods in discriminating between closely related bat species--in this case European horseshoe bats (Rhinolophidae, Chiroptera--based on morphology of the wing, body and tail. In addition to comparing morphometric methods, we used geometric morphometrics to detect interspecies differences as shape changes. Geometric morphometrics yielded improved species discrimination relative to traditional methods. The predicted shape for the variation along the between group principal components revealed that the largest differences between species lay in the extent to which the wing reaches in the direction of the head. This strong trend in interspecific shape variation is associated with size, which we interpret as an evolutionary allometry pattern.

  6. Ontogenetic development and sexual dimorphism of franciscana dolphin skull: A 3D geometric morphometric approach.

    Science.gov (United States)

    del Castillo, Daniela L; Flores, David A; Cappozzo, Humberto L

    2014-12-01

    The aim of this work was to study the postnatal ontogenetic development of Pontoporia blainvillei skull, identifying major changes on shape, and relating them to relevant factors in the life history of the species. We analyzed a complete ontogenetic series (73♂, 83♀) with three-dimensional geometric morphometric techniques. Immature dolphins showed a very well-developed braincase and a poorly developed rostrum, and the principal postnatal changes affected the rostrum and the temporal fossa, both structures implied functionally to the feeding apparatus, thus suggesting a specialized mode for catch fast prey in P. blainvillei. Osseous elements associated with sound production were already well developed on immature dolphins, suggesting the importance of this apparatus since the beginning of postnatal life. Sexual dimorphism was detected on both shape and size variables. Females were bigger than males, in accordance with previous studies. Shape differences between sexes were found on the posterior part of premaxillaries and external bony nares (P < 0.01), suggesting that this sexual dimorphism is related to differences on vocalization capabilities. © 2014 Wiley Periodicals, Inc.

  7. Diversity of neotropical electric fish Microsternarchus (Teleostei: Gymnotiformes: Hypopomidae: an electrophysiological and geometric morphometric approach

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    Adília Nogueira

    2015-11-01

    Full Text Available The South American hypopomid electric fish tribe Microsternarchini includes three small species from the Upper Orinoco and Negro rivers. These are placed in monotypic genera: Microsternarchus, Racenisia and Procerusternarchus. Recent collections from tributaries in Negro, Solimões and Amazonas Basins have revealed new specimens of Microsternarchus with significant variations in external morphology and in Electric Organ Discharge parameters (EOD. In order to estimate the diversity within the genus a previous molecular study was done using DNA barcoding, that suggested the presence of multiple Microsternarchus's lineages with high levels of genetic divergence between them. Here we try to determine if the variation in morphology and EOD parameters in the new specimens meet the genetic divergence found. To test the presence of differences in shape among the different lineages we performed a geometric morphometric analysis, which included a relative warp and multivariate analysis on distances between 14 anatomical landmarks defined on the basis of external morphology and homologous among the lineages. The EOD variations were also explored using multivariate analyses of 20 electrophysiological parameters calculated through an algorithm developed in Matlab. The results show that there are significant differences in body shape and EOD in three lineages of Microsternarchus, and the features that contributed most were related to the shape of the head, the coefficient of variation of the signal and the duration and area of the different phases of the pulse. The discrimination of the three lineages confirms the occurrence of new species in the group that are currently being described.

  8. Quantifying temporal bone morphology of great apes and humans: an approach using geometric morphometrics

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    Lockwood, Charles A; Lynch, John M; Kimbel, William H

    2002-01-01

    The hominid temporal bone offers a complex array of morphology that is linked to several different functional systems. Its frequent preservation in the fossil record gives the temporal bone added significance in the study of human evolution, but its morphology has proven difficult to quantify. In this study we use techniques of 3D geometric morphometrics to quantify differences among humans and great apes and discuss the results in a phylogenetic context. Twenty-three landmarks on the ectocranial surface of the temporal bone provide a high level of anatomical detail. Generalized Procrustes analysis (GPA) is used to register (adjust for position, orientation and scale) landmark data from 405 adults representing Homo, Pan, Gorilla and Pongo. Principal components analysis of residuals from the GPA shows that the major source of variation is between humans and apes. Human characteristics such as a coronally orientated petrous axis, a deep mandibular fossa, a projecting mastoid process, and reduced lateral extension of the tympanic element strongly impact the analysis. In phenetic cluster analyses, gorillas and orangutans group together with respect to chimpanzees, and all apes group together with respect to humans. Thus, the analysis contradicts depictions of African apes as a single morphotype. Gorillas and orangutans lack the extensive preglenoid surface of chimpanzees, and their mastoid processes are less medially inflected. These and other characters shared by gorillas and orangutans are probably primitive for the African hominid clade. PMID:12489757

  9. Functional morphology and integration of corvid skulls – a 3D geometric morphometric approach

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    Gunz Philipp

    2009-01-01

    Full Text Available Abstract Background Sympatric corvid species have evolved differences in nesting, habitat choice, diet and foraging. Differences in the frequency with which corvid species use their repertoire of feeding techniques is expected to covary with bill-shape and with the frontal binocular field. Species that frequently probe are expected to have a relatively longer bill and more sidewise oriented orbits in contrast to species that frequently peck. We tested this prediction by analyzing computed tomography scans of skulls of six corvid species by means of three-dimensional geometric morphometrics. We (1 explored patterns of major variation using principal component analysis, (2 compared within and between species relationships of size and shape and (3 quantitatively compared patterns of morphological integration between bill and cranium by means of partial least squares (singular warp analysis. Results Major shape variation occurs at the bill, in the orientation of orbits, in the position of the foramen magnum and in the angle between bill and cranium. The first principal component correlated positively with centroid-size, but within-species allometric relationships differed markedly. Major covariation between the bill and cranium lies in the difference in orbit orientation relative to bill-length and in the angle between bill and cranium. Conclusion Corvid species show pronounced differences in skull shape, which covary with foraging mode. Increasing bill-length, bill-curvature and sidewise orientation of the eyes is associated with an increase in the observed frequency in probing (vice versa in pecking. Hence, the frequency of probing, bill-length, bill-curvature and sidewise orientation of the eyes is progressively increased from jackdaw, to Eurasian jay, to black-billed magpie, to hooded crow, to rook and to common raven (when feeding on carcasses is considered as probing. Our results on the morphological integration suggest that most of the

  10. Re-description and Reassignment of the Damselfish Abudefduf luridus (Cuvier, 1830) Using Both Traditional and Geometric Morphometric Approaches

    Energy Technology Data Exchange (ETDEWEB)

    Cooper, W. James [Washington State Univ., Pullman, WA (United States); Albertson, R Craig [Univ. of Massachusetts, Amherst, MA (United States); Jacob, Rick E. [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Westneat, Mark W. [Field Museum of Natural History, Chicago, IL (United States)

    2014-12-01

    Here we present a re-description of Abudefduf luridus and reassign it to the genus Similiparma. We supplement traditional diagnoses and descriptions of this species with quantitative anatomical data collected from a family-wide geometric morphometric analysis of head morphology (44 species representing all 30 damselfish genera) and data from cranial micro-CT scans of fishes in the genus Similiparma. The use of geometric morphometric analyses (and other methods of shape analysis) permits detailed comparisons between the morphology of specific taxa and the anatomical diversity that has arisen in an entire lineage. This provides a particularly useful supplement to traditional description methods and we recommend the use of such techniques by systematists. Similiparma and its close relatives constitute a branch of the damselfish phylogenetic tree that predominantly inhabits rocky reefs in the Atlantic and Eastern Pacific, as opposed to the more commonly studied damselfishes that constitute a large portion of the ichthyofauna on all coral-reef communities.

  11. Geometric morphometric footprint analysis of young women

    OpenAIRE

    Domjanic, Jacqueline; Fieder, Martin; Seidler, Horst; Mitteroecker, Philipp

    2013-01-01

    Background Most published attempts to quantify footprint shape are based on a small number of measurements. We applied geometric morphometric methods to study shape variation of the complete footprint outline in a sample of 83 adult women. Methods The outline of the footprint, including the toes, was represented by a comprehensive set of 85 landmarks and semilandmarks. Shape coordinates were computed by Generalized Procrustes Analysis. Results The first four principal components represented t...

  12. Phenotypic plasticity in haptoral structures of Ligophorus cephali (Monogenea: Dactylogyridae) on the flathead mullet (Mugil cephalus): a geometric morphometric approach.

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    Rodríguez-González, Abril; Míguez-Lozano, Raúl; Llopis-Belenguer, Cristina; Balbuena, Juan Antonio

    2015-04-01

    Evaluating phenotypic plasticity in attachment organs of parasites can provide information on the capacity to colonise new hosts and illuminate evolutionary processes driving host specificity. We analysed the variability in shape and size of the dorsal and ventral anchors of Ligophorus cephali from Mugil cephalus by means of geometric morphometrics and multivariate statistics. We also assessed the morphological integration between anchors and between the roots and points in order to gain insight into their functional morphology. Dorsal and ventral anchors showed a similar gradient of overall shape variation, but the amount of localised changes was much higher in the former. Statistical models describing variations in shape and size revealed clear differences between anchors. The dorsal anchor/bar complex seems more mobile than the ventral one in Ligophorus, and these differences may reflect different functional roles in attachment to the gills. The lower residual variation associated with the ventral anchor models suggests a tighter control of their shape and size, perhaps because these anchors seem to be responsible for firmer attachment and their size and shape would allow more effective responses to characteristics of the microenvironment within the individual host. Despite these putative functional differences, the high level of morphological integration indicates a concerted action between anchors. In addition, we found a slight, although significant, morphological integration between roots and points in both anchors, which suggests that a large fraction of the observed phenotypic variation does not compromise the functional role of anchors as levers. Given the low level of genetic variation in our sample, it is likely that much of the morphological variation reflects host-driven plastic responses. This supports the hypothesis of monogenean specificity through host-switching and rapid speciation. The present study demonstrates the potential of geometric

  13. A geometric morphometric assessment of the optic cup in glaucoma.

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    Sanfilippo, Paul G; Cardini, Andrea; Sigal, Ian A; Ruddle, Jonathan B; Chua, Brian E; Hewitt, Alex W; Mackey, David A

    2010-09-01

    The morphologic appearance of the optic disc is of interest in glaucoma. In contrast to descriptive classification systems that are currently used, a quantitative approach to the analysis of optic disc morphology is required. Our goal was to determine the optimal method for quantifying optic cup shape by comparing traditional (ovality, form-factor and neuroretinal rim (NRR) width ratio) and geometric morphometric approaches. Left optic disc stereophotographs of 160 (80 normal and 80 glaucomatous (stratified by severity)) subjects were examined. The optic cup margins were stereoscopically delineated with a custom tracing system and saved as a series of discrete points. The geometric morphometric methods of elliptic Fourier analysis (EFA) and sliding semi-landmark analysis (SSLA) were used to eliminate variation unrelated to shape (e.g. size) and yield a series of shape variables. Differences in optic cup shape between normal and glaucoma groups were investigated. Discriminant functions were computed and the sensitivity and specificity of each technique determined. Receiver operator characteristic (ROC) curves were calculated for all methods and evaluated in their potential to discriminate between normal and glaucomatous eyes based on the shape variables. All geometric morphometric methods revealed differences between normal and glaucomatous eyes in optic cup shape, in addition to the traditional parameters of ovality, form-factor and NRR width ratio (pgeometric morphometric approach for discriminating between normal and glaucomatous eyes in optic cup shape is superior to that provided by traditional single parameter shape measures. Such analytical techniques could be incorporated into future automated optic disc screening modalities. Copyright (c) 2010 Elsevier Ltd. All rights reserved.

  14. Social Complexification and Pig (Sus scrofa Husbandry in Ancient China: A Combined Geometric Morphometric and Isotopic Approach.

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    Thomas Cucchi

    Full Text Available Pigs have played a major role in the economic, social and symbolic systems of China since the Early Neolithic more than 8,000 years ago. However, the interaction between the history of pig domestication and transformations in Chinese society since then, have not been fully explored. In this paper, we investigated the co-evolution from the earliest farming communities through to the new political and economic models of state-like societies, up to the Chinese Empire, using 5,000 years of archaeological records from the Xiawanggang (XWG and Xinzhai (XZ sites (Henan Province. To trace the changes of pig populations against husbandry practices, we combined the geometric morphometric analysis of dental traits with a study of the stable carbon and nitrogen isotope ratios from bone collagen. The domestication process intensified during the Neolithic Yangshao, prompted by greater selective pressure and/or better herd control against wild introgression. After that, pig farming, in XWG, relied on local livestock and a gradual change of husbandry practices overtime. This was characterized by a gentle increase in millet foddering and animal protein intake, until a complete change over to household management during the Han dynasty. The only rupture in this steady trend of husbandry occurred during the Longshan period, with the appearance of small sized and idiosyncratic pigs with specific feeding practices (relying on millet and household scraps. From three exploratory hypothesis, we explored the possibility of anti-elite pig production in XWG during the Longshan period, as a means to resist incorporation into a new economic model promoting intensified domestic production. This exploratory hypothesis is the most suitable to our dataset; however, numerous areas need to be explored further in order to adequately document the role of pigs in the rise of China's complex societies.

  15. Social Complexification and Pig (Sus scrofa) Husbandry in Ancient China: A Combined Geometric Morphometric and Isotopic Approach

    Science.gov (United States)

    Balasse, Marie; Zhao, Chunqing; Gao, Jiangtao; Hu, Yaowu; Yuan, Jing; Vigne, Jean-Denis

    2016-01-01

    Pigs have played a major role in the economic, social and symbolic systems of China since the Early Neolithic more than 8,000 years ago. However, the interaction between the history of pig domestication and transformations in Chinese society since then, have not been fully explored. In this paper, we investigated the co-evolution from the earliest farming communities through to the new political and economic models of state-like societies, up to the Chinese Empire, using 5,000 years of archaeological records from the Xiawanggang (XWG) and Xinzhai (XZ) sites (Henan Province). To trace the changes of pig populations against husbandry practices, we combined the geometric morphometric analysis of dental traits with a study of the stable carbon and nitrogen isotope ratios from bone collagen. The domestication process intensified during the Neolithic Yangshao, prompted by greater selective pressure and/or better herd control against wild introgression. After that, pig farming, in XWG, relied on local livestock and a gradual change of husbandry practices overtime. This was characterized by a gentle increase in millet foddering and animal protein intake, until a complete change over to household management during the Han dynasty. The only rupture in this steady trend of husbandry occurred during the Longshan period, with the appearance of small sized and idiosyncratic pigs with specific feeding practices (relying on millet and household scraps). From three exploratory hypothesis, we explored the possibility of anti-elite pig production in XWG during the Longshan period, as a means to resist incorporation into a new economic model promoting intensified domestic production. This exploratory hypothesis is the most suitable to our dataset; however, numerous areas need to be explored further in order to adequately document the role of pigs in the rise of China’s complex societies. PMID:27384523

  16. Social Complexification and Pig (Sus scrofa) Husbandry in Ancient China: A Combined Geometric Morphometric and Isotopic Approach.

    Science.gov (United States)

    Cucchi, Thomas; Dai, Lingling; Balasse, Marie; Zhao, Chunqing; Gao, Jiangtao; Hu, Yaowu; Yuan, Jing; Vigne, Jean-Denis

    2016-01-01

    Pigs have played a major role in the economic, social and symbolic systems of China since the Early Neolithic more than 8,000 years ago. However, the interaction between the history of pig domestication and transformations in Chinese society since then, have not been fully explored. In this paper, we investigated the co-evolution from the earliest farming communities through to the new political and economic models of state-like societies, up to the Chinese Empire, using 5,000 years of archaeological records from the Xiawanggang (XWG) and Xinzhai (XZ) sites (Henan Province). To trace the changes of pig populations against husbandry practices, we combined the geometric morphometric analysis of dental traits with a study of the stable carbon and nitrogen isotope ratios from bone collagen. The domestication process intensified during the Neolithic Yangshao, prompted by greater selective pressure and/or better herd control against wild introgression. After that, pig farming, in XWG, relied on local livestock and a gradual change of husbandry practices overtime. This was characterized by a gentle increase in millet foddering and animal protein intake, until a complete change over to household management during the Han dynasty. The only rupture in this steady trend of husbandry occurred during the Longshan period, with the appearance of small sized and idiosyncratic pigs with specific feeding practices (relying on millet and household scraps). From three exploratory hypothesis, we explored the possibility of anti-elite pig production in XWG during the Longshan period, as a means to resist incorporation into a new economic model promoting intensified domestic production. This exploratory hypothesis is the most suitable to our dataset; however, numerous areas need to be explored further in order to adequately document the role of pigs in the rise of China's complex societies.

  17. Evolution of neck vertebral shape and neck retraction at the transition to modern turtles: an integrated geometric morphometric approach.

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    Werneburg, Ingmar; Wilson, Laura A B; Parr, William C H; Joyce, Walter G

    2015-03-01

    The unique ability of modern turtles to retract their head and neck into the shell through a side-necked (pleurodiran) or hidden-necked (cryptodiran) motion is thought to have evolved independently in crown turtles. The anatomical changes that led to the vertebral shapes of modern turtles, however, are still poorly understood. Here we present comprehensive geometric morphometric analyses that trace turtle vertebral evolution and reconstruct disparity across phylogeny. Disparity of vertebral shape was high at the dawn of turtle evolution and decreased after the modern groups evolved, reflecting a stabilization of morphotypes that correspond to the two retraction modes. Stem turtles, which had a very simple mode of retraction, the lateral head tuck, show increasing flexibility of the neck through evolution towards a pleurodiran-like morphotype. The latter was the precondition for evolving pleurodiran and cryptodiran vertebrae. There is no correlation between the construction of formed articulations in the cervical centra and neck mobility. An increasing mobility between vertebrae, associated with changes in vertebral shape, resulted in a more advanced ability to retract the neck. In this regard, we hypothesize that the lateral tucking retraction of stem turtles was not only the precondition for pleurodiran but also of cryptodiran retraction. For the former, a kink in the middle third of the neck needed to be acquired, whereas for the latter modification was necessary between the eighth cervical vertebra and first thoracic vertebra. Our paper highlights the utility of 3D shape data, analyzed in a phylogenetic framework, to examine the magnitude and mode of evolutionary modifications to vertebral morphology. By reconstructing and visualizing ancestral anatomical shapes, we provide insight into the anatomical features underlying neck retraction mode, which is a salient component of extant turtle classification. © The Author(s) 2014. Published by Oxford University Press

  18. Exploring Eucladoceros ecomorphology using geometric morphometrics.

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    Curran, Sabrina C

    2015-01-01

    An increasingly common method for reconstructing paleoenvironmental parameters of hominin sites is ecological functional morphology (ecomorphology). This study provides a geometric morphometric study of cervid rearlimb morphology as it relates to phylogeny, size, and ecomorphology. These methods are then applied to an extinct Pleistocene cervid, Eucladoceros, which is found in some of the earliest hominin-occupied sites in Eurasia. Variation in cervid postcranial functional morphology associated with different habitats can be summarized as trade-offs between joint stability versus mobility and rapid movement versus power-generation. Cervids in open habitats emphasize limb stability to avoid joint dislocation during rapid flight from predators. Closed-adapted cervids require more joint mobility to rapidly switch directions in complex habitats. Two skeletal features (of the tibia and calcaneus) have significant phylogenetic signals, while two (the femur and third phalanx) do not. Additionally, morphology of two of these features (tibia and third phalanx) were correlated with body size. For the tibial analysis (but not the third phalanx) this correlation was ameliorated when phylogeny was taken into account. Eucladoceros specimens from France and Romania fall on the more open side of the habitat continuum, a result that is at odds with reconstructions of their diet as browsers, suggesting that they may have had a behavioral regime unlike any extant cervid. © 2014 Wiley Periodicals, Inc.

  19. The Inappropriate Symmetries of Multivariate Statistical Analysis in Geometric Morphometrics.

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    Bookstein, Fred L

    In today's geometric morphometrics the commonest multivariate statistical procedures, such as principal component analysis or regressions of Procrustes shape coordinates on Centroid Size, embody a tacit roster of symmetries -axioms concerning the homogeneity of the multiple spatial domains or descriptor vectors involved-that do not correspond to actual biological fact. These techniques are hence inappropriate for any application regarding which we have a-priori biological knowledge to the contrary (e.g., genetic/morphogenetic processes common to multiple landmarks, the range of normal in anatomy atlases, the consequences of growth or function for form). But nearly every morphometric investigation is motivated by prior insights of this sort. We therefore need new tools that explicitly incorporate these elements of knowledge, should they be quantitative, to break the symmetries of the classic morphometric approaches. Some of these are already available in our literature but deserve to be known more widely: deflated (spatially adaptive) reference distributions of Procrustes coordinates, Sewall Wright's century-old variant of factor analysis, the geometric algebra of importing explicit biomechanical formulas into Procrustes space. Other methods, not yet fully formulated, might involve parameterized models for strain in idealized forms under load, principled approaches to the separation of functional from Brownian aspects of shape variation over time, and, in general, a better understanding of how the formalism of landmarks interacts with the many other approaches to quantification of anatomy. To more powerfully organize inferences from the high-dimensional measurements that characterize so much of today's organismal biology, tomorrow's toolkit must rely neither on principal component analysis nor on the Procrustes distance formula, but instead on sound prior biological knowledge as expressed in formulas whose coefficients are not all the same. I describe the problems

  20. Taxonomic identification using geometric morphometric approach and limited data: an example using the upper molars of two sympatric species of Calomys (Cricetidae: Rodentia

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    Natália Lima Boroni

    2017-10-01

    Full Text Available ABSTRACT The taxonomic identification of micromammals might be complicated when the study material is fragmented, as it is the case with pellets and fossil material. On the other hand, tooth morphology generally provides accurate information for species identification. Teeth preserve notably well, retaining their original morphology, unlike skulls and mandibles, which can get crushed or have missing parts. Here, we explored a geometric morphometrics approach (GM to identify fragmented specimens of two sympatric Calomys Waterhouse, 1837 species - Calomys tener (Winge, 1888 and Calomys expulsus (Lund, 1841 - using the morphology of intact molars as the basis for identification. Furthermore, we included some specimens of uncertain taxonomic identification to test their affinities and the utility of the shape of the molar to identify incomplete specimens. We evaluated the variations in the shape of the first upper molar (M1 among 46 owl pellets specimens of Calomys, including C. expulsus (n = 15, C. tener (n = 15, and unidentified specimens treated as Calomys sp. (n = 16 through GM analysis using 17 landmarks. The data was explored using PCA, PERMANOVA, and Discriminant analyses over the Procrustes residuals matrix were applied to evaluate inter- and intraspecific shape differences. Also, we evaluated whether allometric shape differences could impact the data, but found no evidence of a correlation between size and shape. Our results support that shape differences in the M1 are effective for discriminating between C. tener and C. expulsus. Moreover, the unidentified specimens do not represent a third shape but could be identified with confidence either as C. tener or C. expulsus. Our results show that even with fragmentary materials, GM is a feasible and useful tool for exploring inter-specific shape differences and assisting in taxonomic identification as a complement to traditional qualitative description of diagnostic features in poorly preserved

  1. Identification of the species of the Cheilosia variabilis group (Diptera, Syrphidae) from the Balkan Peninsula using wing geometric morphometrics, with the revision of status of C. melanopa redi Vujic, 1996

    NARCIS (Netherlands)

    Francuski, Lj.; Vujic, A.; Kovacevic, A.; Ludoski, J.; Milankov, V.

    2009-01-01

    The present study investigates phenotypic differentiation patterns among four species of the Cheilosia variabilis group (Diptera, Syrphidae) using a landmark-based geometric morphometric approach. Herein, wing geometric morphometrics established species boundaries that confirm C. melanopa and C.

  2. Sex determination from the frontal bone: a geometric morphometric study.

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    Perlaza, Néstor A

    2014-09-01

    Sex estimation in human skeletal remains when using the cranium through traditional methods is a fundamental pillar in human identification; however, it may be possible to incur in a margin of error due because of the state of preservation in incomplete or fragmented remains. The aim of this investigation was sex estimation through the geometric morphometric analysis of the frontal bone. The sample employed 60 lateral radiographs of adult subjects of both sexes (30 males and 30 females), aged between 18 and 40 years, with mean age for males of 28 ± 4 and 30 ± 6 years for females. Thin-plate splines evidenced strong expansion of the glabellar region in males and contraction in females. No significant differences were found between sexes with respect to size. The findings suggest differences in shape and size in the glabellar region, besides reaffirming the use of geometric morphometrics as a quantitative method in sex estimation. © 2014 American Academy of Forensic Sciences.

  3. The problem of assessing landmark error in geometric morphometrics: theory, methods, and modifications.

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    von Cramon-Taubadel, Noreen; Frazier, Brenda C; Lahr, Marta Mirazón

    2007-09-01

    Geometric morphometric methods rely on the accurate identification and quantification of landmarks on biological specimens. As in any empirical analysis, the assessment of inter- and intra-observer error is desirable. A review of methods currently being employed to assess measurement error in geometric morphometrics was conducted and three general approaches to the problem were identified. One such approach employs Generalized Procrustes Analysis to superimpose repeatedly digitized landmark configurations, thereby establishing whether repeat measures fall within an acceptable range of variation. The potential problem of this error assessment method (the "Pinocchio effect") is demonstrated and its effect on error studies discussed. An alternative approach involves employing Euclidean distances between the configuration centroid and repeat measures of a landmark to assess the relative repeatability of individual landmarks. This method is also potentially problematic as the inherent geometric properties of the specimen can result in misleading estimates of measurement error. A third approach involved the repeated digitization of landmarks with the specimen held in a constant orientation to assess individual landmark precision. This latter approach is an ideal method for assessing individual landmark precision, but is restrictive in that it does not allow for the incorporation of instrumentally defined or Type III landmarks. Hence, a revised method for assessing landmark error is proposed and described with the aid of worked empirical examples. (c) 2007 Wiley-Liss, Inc.

  4. Geometric morphometrics as a tool for improving the comparative study of behavioural postures.

    Science.gov (United States)

    Fureix, Carole; Hausberger, Martine; Seneque, Emilie; Morisset, Stéphane; Baylac, Michel; Cornette, Raphaël; Biquand, Véronique; Deleporte, Pierre

    2011-07-01

    Describing postures has always been a central concern when studying behaviour. However, attempts to compare postures objectively at phylogenetical, populational, inter- or intra-individual levels generally either rely upon a few key elements or remain highly subjective. Here, we propose a novel approach, based on well-established geometric morphometrics, to describe and to analyse postures globally (i.e. considering the animal's body posture in its entirety rather than focusing only on a few salient elements, such as head or tail position). Geometric morphometrics is concerned with describing and comparing variation and changes in the form (size and shape) of organisms using the coordinates of a series of homologous landmarks (i.e. positioned in relation to skeletal or muscular cues that are the same for different species for every variety of form and function and that have derived from a common ancestor, i.e. they have a common evolutionary ancestry, e.g. neck, wings, flipper/hand). We applied this approach to horses, using global postures (1) to characterise behaviours that correspond to different arousal levels, (2) to test potential impact of environmental changes on postures. Our application of geometric morphometrics to horse postures showed that this method can be used to characterise behavioural categories, to evaluate the impact of environmental factors (here human actions) and to compare individuals and groups. Beyond its application to horses, this promising approach could be applied to all questions involving the analysis of postures (evolution of displays, expression of emotions, stress and welfare, behavioural repertoires…) and could lead to a whole new line of research.

  5. Assessing dental wear in reindeer using geometric morphometrical methods

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    Rolf Rødven

    2009-01-01

    Full Text Available Assessing dental wear is a useful tool for monitoring the interaction between ungulates and their food resources. However, using a univariate measurement for dental wear, like for instance height of the first molar may not capture the variation in dental wear important for the dental functional morphology. We here demonstrate a method for assessing dental wear for ungulates by using geometric morphometrical methods on 11 mandibles from nine Svalbard reindeer (Rangifer tarandus platyrhynchus. Shape measurements were obtained from a combination of fixed and sliding semi-landmarks, and dental wear was estimated using residual variation of the landmarks. The morphometric measurements obtained showed a good fit when compared to subjective scores of dental wear. We conclude that this method may give a more integrated and robust assessment of dental wear than univariate methods, and suggest it to be used as an alternative or in addition to traditional measurements of dental wear.Abstract in Norwegian / Sammendrag:Vurdering av tannslitasje hos rein ved hjelp av geometrisk morfometriske metoder Vurdering av tannslitasje er en anvendbar metode for å overvåke betydningen av miljøet for livshistorien til hovdyr. Imidlertid vil bruk av et enkelt mål, som for eksempel høyde på første molar, ikke nødvendigvis fange opp variasjonen i tannslitasje som er viktig i forhold til tennenes funksjonelle morfologi. I denne artikkelen viser vi hvordan tannslitasje kan vurderes ved å anvende geometrisk morfometriske metoder på 11 underkjever fra ni Svalbardrein (Rangifer tarandus platyrhynchus. Formen på tannrekka ble målt ved hjelp av en kombinasjon av fikserte og glidende semi-landemerker, hvor tannslitasje ble estimert ved å bruke residual variasjon av landemerkene. De morfometriske målene stemte godt overens med subjektiv vurdering av tannslitasje. Vi konkluderer at denne metoden kan gi en mer integrert og robust vurdering av tannslitasje enn univariate

  6. Using geometric morphometric visualizations of directional selection gradients to investigate morphological differentiation.

    Science.gov (United States)

    Weaver, Timothy D; Gunz, Philipp

    2018-04-01

    Researchers studying extant and extinct taxa are often interested in identifying the evolutionary processes that have lead to the morphological differences among the taxa. Ideally, one could distinguish the influences of neutral evolutionary processes (genetic drift, mutation) from natural selection, and in situations for which selection is implicated, identify the targets of selection. The directional selection gradient is an effective tool for investigating evolutionary process, because it can relate form (size and shape) differences between taxa to the variation and covariation found within taxa. However, although most modern morphometric analyses use the tools of geometric morphometrics (GM) to analyze landmark data, to date, selection gradients have mainly been calculated from linear measurements. To address this methodological gap, here we present a GM approach for visualizing and comparing between-taxon selection gradients with each other, associated difference vectors, and "selection" gradients from neutral simulations. To exemplify our approach, we use a dataset of 347 three-dimensional landmarks and semilandmarks recorded on the crania of 260 primate specimens (112 humans, 67 common chimpanzees, 36 bonobos, 45 gorillas). Results on this example dataset show how incorporating geometric information can provide important insights into the evolution of the human braincase, and serve to demonstrate the utility of our approach for understanding morphological evolution. © 2018 The Author(s). Evolution © 2018 The Society for the Study of Evolution.

  7. A geometric morphometric study into the sexual dimorphism of the human scapula.

    Science.gov (United States)

    Scholtz, Y; Steyn, M; Pretorius, E

    2010-08-01

    Sex determination is vital when attempting to establish identity from skeletal remains. Two approaches to sex determination exists: morphological and metrical. The aim of this paper was to use geometric morphometrics to study the shape of the scapula and its sexual dimorphism. The sample comprised 45 adult black male and 45 adult black female scapulae of known sex. The scapulae were photographed and 21 homologous landmarks were plotted to use for geometric morphometric analysis with the 'tps' series of programs, as well as the IMP package. Consensus thin-plate splines and vector plots for males and females were compared. The CVA and TwoGroup analyses indicated that significant differences exist between males and females. The lateral and medial borders of females are straighter while the supraspinous fossa is more convexly curved than that of males. More than 91% of the females and 95% of the males were correctly assigned. Hotelling's T(2)-test yielded a significant p-value of 0.00039. In addition, 100 equidistant landmarks representing the curve only were also assigned. These, however, yielded considerably poorer results. It is concluded that it is better to use homologous landmarks rather than curve data only, as it is most probable that the shape of the outline relative to the fixed homologous points on the scapula is sexually dimorphic.

  8. A geometric morphometric analysis of hominin lower molars: Evolutionary implications and overview of postcanine dental variation.

    Science.gov (United States)

    Gómez-Robles, Aida; Bermúdez de Castro, José María; Martinón-Torres, María; Prado-Simón, Leyre; Arsuaga, Juan Luis

    2015-05-01

    Lower molars have been extensively studied in the context of hominin evolution using classic and geometric morphometric analyses, 2D and 3D approaches, evaluations of the external (outer enamel surface) and internal anatomy (dentine, pulp chamber, and radicular canals), and studies of the crown and root variation. In this study, we present a 2D geometric morphometric analysis of the crown anatomy of lower first, second, and third molars of a broad sample of hominins, including Pliocene and Lower, Middle, and Upper Pleistocene species coming from Africa, Asia, and Europe. We show that shape variability increases from first to second and third molars. While first molars tend to retain a relatively stable 5-cusped conformation throughout the hominin fossil record, second and third molars show marked distal reductions in later Homo species. This trend to distal reduction is similar to that observed in previous studies of premolars and upper second and third molars, and points to a correlated reduction of distal areas across the whole postcanine dentition. Results on lower molar variation, as well as on other postcanine teeth, show certain trends in European Pleistocene populations from the Atapuerca sites. Middle Pleistocene hominins from Sima de los Huesos show Neanderthal affinities and strong dental reduction, especially in the most distal molars. The degree of dental reduction in this population is stronger than that observed in classic Neanderthals. Homo antecessor hominins from Gran Dolina-TD6 have primitive lower teeth that contrast with their more derived upper teeth. The evolutionary implications of these dental affinities are discussed in light of recent paleogenetic studies. Copyright © 2015 Elsevier Ltd. All rights reserved.

  9. How effective are geometric morphometric techniques for assessing functional shape variation? An example from the great ape temporomandibular joint.

    Science.gov (United States)

    Terhune, Claire E

    2013-08-01

    Functional shape analyses have long relied on the use of shape ratios to test biomechanical hypotheses. This method is powerful because of the ease with which results are interpreted, but these techniques fall short in quantifying complex morphologies that may not have a strong biomechanical foundation but may still be functionally informative. In contrast, geometric morphometric methods are continually being adopted for quantifying complex shapes, but they tend to prove inadequate in functional analyses because they have little foundation in an explicit biomechanical framework. The goal of this study was to evaluate the intersection of these two methods using the great ape temporomandibular joint as a case study. Three-dimensional coordinates of glenoid fossa and mandibular condyle shape were collected using a Microscribe digitizer. Linear distances extracted from these landmarks were analyzed using a series of one-way ANOVAs; further, the landmark configurations were analyzed using geometric morphometric techniques. Results suggest that the two methods are broadly similar, although the geometric morphometric data allow for the identification of shape differences among taxa that were not immediately apparent in the univariate analyses. Furthermore, this study suggests several new approaches for translating these shape data into a biomechanical context by adjusting the data using a biomechanically relevant variable. Copyright © 2013 Wiley Periodicals, Inc.

  10. Interspecific variation in the tetradactyl manus of modern tapirs (Perissodactyla: Tapirus) exposed using geometric morphometrics.

    Science.gov (United States)

    MacLaren, Jamie A; Nauwelaerts, Sandra

    2017-11-01

    The distal forelimb (autopodium) of quadrupedal mammals is a key morphological unit involved in locomotion, body support, and interaction with the substrate. The manus of the tapir (Perissodactyla: Tapirus) is unique within modern perissodactyls, as it retains the plesiomorphic tetradactyl (four-toed) condition also exhibited by basal equids and rhinoceroses. Tapirs are known to exhibit anatomical mesaxonic symmetry in the manus, although interspecific differences and biomechanical mesaxony have yet to be rigorously tested. Here, we investigate variation in the manus morphology of four modern tapir species (Tapirus indicus, Tapirus bairdii, Tapirus pinchaque, and Tapirus terrestris) using a geometric morphometric approach. Autopodial bones were laser scanned to capture surface shape and morphology was quantified using 3D-landmark analysis. Landmarks were aligned using Generalised Procrustes Analysis, with discriminant function and partial least square analyses performed on aligned coordinate data to identify features that significantly separate tapir species. Overall, our results support the previously held hypothesis that T. indicus is morphologically separate from neotropical tapirs; however, previous conclusions regarding function from morphological differences are shown to require reassessment. We find evidence indicating that T. bairdii exhibits reduced reliance on the lateral fifth digit compared to other tapirs. Morphometric assessment of the metacarpophalangeal joint and the morphology of the distal facets of the lunate lend evidence toward high loading on the lateral digits of both the large T. indicus (large body mass) and the small, long limbed T. pinchaque (ground impact). Our results support other recent studies on T. pinchaque, suggesting subtle but important adaptations to a compliant but inclined habitat. In conclusion, we demonstrate further evidence that the modern tapir forelimb is a variable locomotor unit with a range of interspecific features

  11. Geometric morphometric differences between Panstrongylus geniculatus from field and laboratory

    Directory of Open Access Journals (Sweden)

    Nicolás Jaramillo O

    2002-07-01

    Full Text Available The finding of Panstrongylus geniculatus nymphs inside a house in northeastern Antioquia, Colombia, and the reports related to their increasing presence in homes suggest the need for surveillance methods for monitoring the invasion processes. We analyzed the morphological differences between a wild population and its laboratory descendants, using the techniques of geometric morphometry, with the idea that such differences might parallel those between sylvatic and synanthropic populations. The analyses over five generations showed differences in size but not in shape. Head size and wing size were both reduced from sylvatic to laboratory populations, but the decrease in head size occurred only up to the second generation while the decrease in wing size proceeded up to the fifth generation. In contrast, although a decrease in sexual size dimorphism has been proposed as a marker of colonization in human dwellings, we did not detect any significant loss of dimorphism between sexes of P. geniculatus over the five generations studied. We conclude that size changes may have a physiological origin in response to a change of ecotopes, but more than five generations may be required for the expression of permanent morphological markers of human dwellings colonization.

  12. Is torosaurus triceratops? Geometric morphometric evidence of late maastrichtian ceratopsid dinosaurs.

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    Leonardo Maiorino

    Full Text Available BACKGROUND: Recent assessments of morphological changes in the frill during ontogeny hypothesized that the late Maastrichtian horned dinosaur Torosaurus represents the "old adult" of Triceratops, although acceptance of this finding has been disputed on several lines of evidence. METHODOLOGY/PRINCIPAL FINDINGS: Examining the cranial morphology of 28 skulls in lateral view and 36 squamosals of Nedoceratops hatcheri, Triceratops spp. and Torosaurus spp. by means of landmark-based geometric morphometrics, we compared ontogenetic trajectories among these taxa. Principal Component Analysis and cluster analysis confirmed different cranial morphologies. Torosaurus shape space is well separated from Triceratops, whereas Triceratops horridus and Triceratops prorsus partially overlap within Triceratops shape space. Linear regressions between shape and size suggest different ontogenetic trajectories among these taxa. Results support the "traditional" taxonomic status of Torosaurus. We hypothesize that ontogeny drives cranial morphology with different patterns between Torosaurus and Triceratops. CONCLUSIONS/SIGNIFICANCE: Torosaurus is a distinct and valid taxon. Whether looking at entire skulls, skulls without the frill, frills alone, or squamosals, Torosaurus has different morphologies and distinct allometric trajectories compared to Triceratops. This new approach confirms the taxonomic status of Torosaurus as well as the comparatively low diversity of ceratopsids at the end of the Maastrichtian in North America.

  13. Preliminary baropodometric analysis of young soccer players while walking: geometric morphometrics and comparative evaluation.

    Science.gov (United States)

    Mantini, S; Bruner, E; Colaiacomo, B; Ciccarelli, A; Redaelli, A; Ripani, M

    2012-04-01

    The plantar support and its modifications are widely studied because of their bearing on posture. In particular, past studies have focused on the support modification during specific athletic tasks to highlight the eventual correlations between foot type and the most frequent sport injuries, due to intrinsic and extrinsic components that involve the structural and functional dynamics that act on the plantar vault during static and dynamic condition. These studies have been conducted by analyzing the morphological variation of the footprint during the performance. In the present study the variation in shape of the baropodometrical footprint of young soccer players, has been analyzed using geometric morphometrics. This approach permits a quantification of the morphological variation of the subjects using Cartesian coordinates placed at specific points on the footprint outline, and to correlate them with physical variables. In the present study the young soccer players displayed a narrowing of the footprint due to a transversal variation on the isthmus, when compared to children of the same age who did not play soccer. These results suggest a physiological and biomechanical organization of the foot type in soccer due to the specific athletic tasks involved. As the foot type, in sport, is strictly associated to recurrent injuries, the result obtained in this study should be considered as indicative for future analysis. In fact, a clear and univocal knowledge of this phenomenon would be useful in the planning of a training protocol to reduce the incidence of sport related injuries.

  14. Geometric morphometrics in primatology: craniofacial variation in Homo sapiens and Pan troglodytes.

    Science.gov (United States)

    Lynch, J M; Wood, C G; Luboga, S A

    1996-01-01

    Traditionally, morphometric studies have relied on statistical analysis of distances, angles or ratios to investigate morphometric variation among taxa. Recently, geometric techniques have been developed for the direct analysis of landmark data. In this paper, we offer a summary (with examples) of three of these newer techniques, namely shape coordinate, thin-plate spline and relative warp analyses. Shape coordinate analysis detected significant craniofacial variation between 4 modern human populations, with African and Australian Aboriginal specimens being relatively prognathous compared with their Eurasian counterparts. In addition, the Australian specimens exhibited greater basicranial flexion than all other samples. The observed relationships between size and craniofacial shape were weak. The decomposition of shape variation into affine and non-affine components is illustrated via a thin-plate spline analysis of Homo and Pan cranial landmarks. We note differences between Homo and Pan in the degree of prognathism and basicranial flexion and the position and orientation of the foramen magnum. We compare these results with previous studies of these features in higher primates and discuss the utility of geometric morphometrics as a tool in primatology and physical anthropology. We conclude that many studies of morphological variation, both within and between taxa, would benefit from the graphical nature of these techniques.

  15. DNA-based and geometric morphometric analysis to validate species designation: a case study of the subterranean rodent Ctenomys bicolor.

    Science.gov (United States)

    Stolz, J F B; Gonçalves, G L; Leipnitz, L; Freitas, T R O

    2013-10-25

    The genus Ctenomys (Rodentia: Ctenomyidae) shows several taxonomic inconsistencies. In this study, we used an integrative approach including DNA sequences, karyotypes, and geometric morphometrics to evaluate the taxonomic validity of a nominal species, Ctenomys bicolor, which was described based on only one specimen in 1912 by Miranda Ribeiro, and since then neglected. We sampled near the type locality assigned to this species and collected 10 specimens. A total of 820 base pairs of the cytochrome b gene were sequenced and analyzed together with nine other species and four morphotypes obtained from GenBank. Bayesian analyses showed that C. bicolor is monophyletic and related to the Bolivian-Matogrossense group, a clade that originated about 3 mya. We compared the cranial shape through morphometric geometrics of C. bicolor, including the specimen originally sampled in 1912, with other species representative of the same phylogenetic group (C. boliviensis and C. steinbachi). C. bicolor shows unique skull traits that distinguish it from all other currently known taxa. Our findings confirm that the specimen collected by Miranda Ribeiro is a valid species, and improve the knowledge about Ctenomys in the Amazon region.

  16. Leaf morphology, taxonomy and geometric morphometrics: a simplified protocol for beginners.

    Directory of Open Access Journals (Sweden)

    Vincenzo Viscosi

    Full Text Available Taxonomy relies greatly on morphology to discriminate groups. Computerized geometric morphometric methods for quantitative shape analysis measure, test and visualize differences in form in a highly effective, reproducible, accurate and statistically powerful way. Plant leaves are commonly used in taxonomic analyses and are particularly suitable to landmark based geometric morphometrics. However, botanists do not yet seem to have taken advantage of this set of methods in their studies as much as zoologists have done. Using free software and an example dataset from two geographical populations of sessile oak leaves, we describe in detailed but simple terms how to: a compute size and shape variables using Procrustes methods; b test measurement error and the main levels of variation (population and trees using a hierachical design; c estimate the accuracy of group discrimination; d repeat this estimate after controlling for the effect of size differences on shape (i.e., allometry. Measurement error was completely negligible; individual variation in leaf morphology was large and differences between trees were generally bigger than within trees; differences between the two geographic populations were small in both size and shape; despite a weak allometric trend, controlling for the effect of size on shape slighly increased discrimination accuracy. Procrustes based methods for the analysis of landmarks were highly efficient in measuring the hierarchical structure of differences in leaves and in revealing very small-scale variation. In taxonomy and many other fields of botany and biology, the application of geometric morphometrics contributes to increase scientific rigour in the description of important aspects of the phenotypic dimension of biodiversity. Easy to follow but detailed step by step example studies can promote a more extensive use of these numerical methods, as they provide an introduction to the discipline which, for many biologists, is

  17. BMI and WHR Are Reflected in Female Facial Shape and Texture: A Geometric Morphometric Image Analysis.

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    Christine Mayer

    Full Text Available Facial markers of body composition are frequently studied in evolutionary psychology and are important in computational and forensic face recognition. We assessed the association of body mass index (BMI and waist-to-hip ratio (WHR with facial shape and texture (color pattern in a sample of young Middle European women by a combination of geometric morphometrics and image analysis. Faces of women with high BMI had a wider and rounder facial outline relative to the size of the eyes and lips, and relatively lower eyebrows. Furthermore, women with high BMI had a brighter and more reddish skin color than women with lower BMI. The same facial features were associated with WHR, even though BMI and WHR were only moderately correlated. Yet BMI was better predictable than WHR from facial attributes. After leave-one-out cross-validation, we were able to predict 25% of variation in BMI and 10% of variation in WHR by facial shape. Facial texture predicted only about 3-10% of variation in BMI and WHR. This indicates that facial shape primarily reflects total fat proportion, rather than the distribution of fat within the body. The association of reddish facial texture in high-BMI women may be mediated by increased blood pressure and superficial blood flow as well as diet. Our study elucidates how geometric morphometric image analysis serves to quantify the effect of biological factors such as BMI and WHR to facial shape and color, which in turn contributes to social perception.

  18. The potential of statistical shape modelling for geometric morphometric analysis of human teeth in archaeological research.

    Science.gov (United States)

    Woods, Christopher; Fernee, Christianne; Browne, Martin; Zakrzewski, Sonia; Dickinson, Alexander

    2017-01-01

    This paper introduces statistical shape modelling (SSM) for use in osteoarchaeology research. SSM is a full field, multi-material analytical technique, and is presented as a supplementary geometric morphometric (GM) tool. Lower mandibular canines from two archaeological populations and one modern population were sampled, digitised using micro-CT, aligned, registered to a baseline and statistically modelled using principal component analysis (PCA). Sample material properties were incorporated as a binary enamel/dentin parameter. Results were assessed qualitatively and quantitatively using anatomical landmarks. Finally, the technique's application was demonstrated for inter-sample comparison through analysis of the principal component (PC) weights. It was found that SSM could provide high detail qualitative and quantitative insight with respect to archaeological inter- and intra-sample variability. This technique has value for archaeological, biomechanical and forensic applications including identification, finite element analysis (FEA) and reconstruction from partial datasets.

  19. The potential of statistical shape modelling for geometric morphometric analysis of human teeth in archaeological research.

    Directory of Open Access Journals (Sweden)

    Christopher Woods

    Full Text Available This paper introduces statistical shape modelling (SSM for use in osteoarchaeology research. SSM is a full field, multi-material analytical technique, and is presented as a supplementary geometric morphometric (GM tool. Lower mandibular canines from two archaeological populations and one modern population were sampled, digitised using micro-CT, aligned, registered to a baseline and statistically modelled using principal component analysis (PCA. Sample material properties were incorporated as a binary enamel/dentin parameter. Results were assessed qualitatively and quantitatively using anatomical landmarks. Finally, the technique's application was demonstrated for inter-sample comparison through analysis of the principal component (PC weights. It was found that SSM could provide high detail qualitative and quantitative insight with respect to archaeological inter- and intra-sample variability. This technique has value for archaeological, biomechanical and forensic applications including identification, finite element analysis (FEA and reconstruction from partial datasets.

  20. Landmark-based geometric morphometric analysis of wing shape among certain species of Aedes mosquitoes in District Dehradun (Uttarakhand), India.

    Science.gov (United States)

    Mondal, Ritwik; Devi, N Pemola; Jauhari, R K

    2015-06-01

    Insect wing morphology has been used in many studies to describe variations among species and populations using traditional morphometrics, and more recently geometric morphometrics. A landmark-based geometric morphometric analysis of the wings of three species of Aedes (Diptera: Culicidae), viz. Ae. aegypti, Ae. albopictus and Ae. pseudotaeniatus, at District Dehradun was conducted belling on the fact that it can provide insight into the population structure, ecology and taxonomic identification. Adult Aedes mosquito specimens were randomly collected using aerial nets and morphologically examined and identified. The landmarks were identified on the basis of landmark based geometric morphometric analysis thin-plate spline (mainly the software tps-Util 1.28; tps-Dig 1.40; tps-Relw 1.53; and tps-Spline 1.20) and integrated morphometrics programme (mainly twogroup win8 and PCA win8) were utilized. In relative warp (RW) analysis, the first two RW of Ae. aegypti accounted for the highest value (95.82%), followed by Ae. pseudotaeniatus (90.89%), while the lowest (90.12%) being recorded for Ae. albopictus. The bending energies of Ae. aegypti and Ae. pseudotaeniatus were quite identical being 0.1882 and 0.1858 respectively, while Ae. albopictus recorded the highest value of 0.9774. The mean difference values of the distances among Aedes species performing Hotelling's T 2 test were significantly high, predicting major differences among the taxa. In PCA analysis, the horizontal and vertical axis summarized 52.41 and 23.30% of variances respectively. The centroid size exhibited significant differences among populations (non-parametric Kruskal-Wallis test, H = 10.56, p < 0.01). It has been marked out that the geometric morphometrics utilizes powerful and comprehensive statistical procedures to analyze the shape differences of a morphological feature, assuming that the studied mosquitoes may represent different genotypes and probably come from one diverse gene pool.

  1. A geometric morphometric analysis of the shape of the first upper molar in mice of the genus Mus (Muridae, Rodentia)

    Czech Academy of Sciences Publication Activity Database

    Macholán, Miloš

    2006-01-01

    Roč. 270, č. 4 (2006), s. 672-681 ISSN 0952-8369 R&D Projects: GA AV ČR IAA6045307 Institutional research plan: CEZ:AV0Z50450515 Keywords : Mus * geometric morphometrics * thin-plate spline Subject RIV: EB - Genetics ; Molecular Biology Impact factor: 1.413, year: 2006

  2. A three-dimensional geometric morphometrics view of the cranial shape variation and population history in the New World.

    Science.gov (United States)

    Galland, Manon; Friess, Martin

    2016-09-10

    Craniofacial variation in past and present Amerindians has been attributed to the effect of multiple founder events, or to one major migration followed by in situ differentiation and possibly recurrent contacts among Circum-Arctic groups. Our study aims to: (i) detect morphological differences that may indicate several migrations; (ii) test for the presence of genetic isolation; and (iii) test the correlation between shape data and competing settlement hypotheses by taking into account geography, chronology, climate effects, the presence of genetic isolation and recurrent gene flow. We analyzed a large sample of three-dimensional (3D) cranial surface scans (803 specimens) including past and modern groups from America and Australasia. Shape variation was investigated using geometric morphometrics. Differential external gene flow was evaluated by applying genetic concepts to morphometric data (Relethford-Blangero approach). Settlement hypotheses were tested using a matrix correlation approach (Mantel tests). Our results highlight the strong dichotomy between Circum-Arctic and continental Amerindians as well as the impact of climate adaptation, and possibly recurrent gene flow in the Circum-Arctic area. There is also evidence for the impact of genetic isolation on phenetic variation in Baja California. Several settlement hypotheses are correlated with our data. The three approaches used in this study highlight the importance of local processes especially in Baja California, and caution against the use of overly simplistic models when searching for the number of migration events. The results stress the complexity of the settlement of the Americas as well as the mosaic nature of the processes involved in this process. Am. J. Hum. Biol. 28:646-661, 2016. © 2016 Wiley Periodicals, Inc. © 2016 Wiley Periodicals, Inc.

  3. Metric and geometric morphometric analysis of new hominin fossils from Maba (Guangdong, China).

    Science.gov (United States)

    Xiao, Dongfang; Bae, Christopher J; Shen, Guanjun; Delson, Eric; Jin, Jennie J H; Webb, Nicole M; Qiu, Licheng

    2014-09-01

    We present an analysis of a set of previously unreported hominin fossils from Maba (Guangdong, China), a cave site that is best known for the presence of a partial hominin cranium currently assigned as mid-Pleistocene Homo and that has been traditionally dated to around the Middle-Late Pleistocene transition. A more recent set of Uranium series dates indicate that the Maba travertine may date to >237 ka (thousands of years ago), as opposed to the original U-series date, which placed Maba at 135-129 ka. The fossils under study include five upper first and second molars and a partial left mandible with a socketed m3, all recovered from different parts of the site than the cranium or the dated sediments. The results of our metric and 2D geometric morphometric ('GM') study suggest that the upper first molars are likely from modern humans, suggesting a more recent origin. The upper second molars align more closely with modern humans, though the minimum spanning tree from the 2D GM analysis also connects Maba to Homo neanderthalensis. The patterning in the M2s is not as clear as with the M1s. The m3 and partial mandible are morphometrically intermediate between Holocene modern humans and older Homo sapiens. However, a minimum spanning tree indicates that both the partial mandible and m3 align most closely with Holocene modern humans, and they also may be substantially younger than the cranium. Because questions exist regarding the context and the relationship of the dated travertine with the hominin fossils, we suggest caution is warranted in interpreting the Maba specimens. Copyright © 2014 Elsevier Ltd. All rights reserved.

  4. Heritability of face shape in twins: a preliminary study using 3D stereophotogrammetry and geometric morphometrics

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    Seth M. Weinberg

    2013-11-01

    Full Text Available Introduction: Previous research suggests that aspects of facial surface morphology are heritable.  Traditionally, heritability studies have used a limited set of linear distances to quantify facial morphology and often employ statistical methods poorly designed to deal with biological shape.  In this preliminary report, we use a combination of 3D photogrammetry and landmark-based morphometrics to explore which aspects of face shape show the strongest evidence of heritability in a sample of twins. Methods: 3D surface images were obtained from 21 twin pairs (10 monozygotic, 11 same-sex dizygotic.  Thirteen 3D landmarks were collected from each facial surface and their coordinates subjected to geometric morphometric analysis.  This involved superimposing the individual landmark configurations and then subjecting the resulting shape coordinates to a principal components analysis.  The resulting PC scores were then used to calculate rough narrow-sense heritability estimates. Results: Three principal components displayed evidence of moderate to high heritability and were associated with variation in the breadth of orbital and nasal structures, upper lip height and projection, and the vertical and forward projection of the root of the nose due to variation in the position of nasion. Conclusions: Aspects of facial shape, primarily related to variation in length and breadth of central midfacial structures, were shown to demonstrate evidence of strong heritability. An improved understanding of which facial features are under strong genetic control is an important step in the identification of specific genes that underlie normal facial variation.

  5. Geometrical approach to fluid models

    International Nuclear Information System (INIS)

    Kuvshinov, B.N.; Schep, T.J.

    1997-01-01

    Differential geometry based upon the Cartan calculus of differential forms is applied to investigate invariant properties of equations that describe the motion of continuous media. The main feature of this approach is that physical quantities are treated as geometrical objects. The geometrical notion of invariance is introduced in terms of Lie derivatives and a general procedure for the construction of local and integral fluid invariants is presented. The solutions of the equations for invariant fields can be written in terms of Lagrange variables. A generalization of the Hamiltonian formalism for finite-dimensional systems to continuous media is proposed. Analogously to finite-dimensional systems, Hamiltonian fluids are introduced as systems that annihilate an exact two-form. It is shown that Euler and ideal, charged fluids satisfy this local definition of a Hamiltonian structure. A new class of scalar invariants of Hamiltonian fluids is constructed that generalizes the invariants that are related with gauge transformations and with symmetries (Noether). copyright 1997 American Institute of Physics

  6. Comparison of morphological variations among three species of the genus Paracobitis in Iran using geometric morphometrics method with a taxonomical review on the genus in Iran

    Directory of Open Access Journals (Sweden)

    Omid Jafari

    2015-04-01

    Full Text Available This study was conducted to apply the landmark-based geometric morphometrics technique to differentiate three species of the genus Paracobitis (P. iranica, P. malapterura and P. rhadinaeus in Iran based on their body shape, because previous works, using traditional morphometrics, could not distinct them. A total of 150 specimens were sampled from the Zaringol, Madarsoo, Ghomrood, Kordan Rivers and Chahnimeh reservoir. The left side of the specimens was photographed using a digital camera and then fifteen landmark-points were digitized on two-dimensional images using TpsDig2. Landmark data were analyzed after a generalised procrustes analysis using PCA, CVA and cluster analysis. The patterns of body shape differences among the populations were illustrated in the deformation grids in relation to consensus configuration. The results showed a significant differences among the studied species and their populations in terms of morphological traits (P<0.0001. Some differences were found in the length and depth of head, depth of body, caudal peduncle length and position of eye and position of dorsal fin. The result also showed that P. iranica from Kordan River can be considered to be a distinct taxon compared to the Ghomrood taxon based on its morphological characteristics. In addition, our findings revealed that the geometric morphometrics approach can be a proper tool for morphological and taxonomic studies in species with small sizes including Nemachelinae.

  7. A geometric morphometric analysis of hominin upper premolars. Shape variation and morphological integration.

    Science.gov (United States)

    Gómez-Robles, Aida; Martinón-Torres, María; Bermúdez de Castro, José María; Prado-Simón, Leyre; Arsuaga, Juan Luis

    2011-12-01

    This paper continues the series of articles initiated in 2006 that analyse hominin dental crown morphology by means of geometric morphometric techniques. The detailed study of both upper premolar occlusal morphologies in a comprehensive sample of hominin fossils, including those coming from the Gran Dolina-TD6 and Sima de los Huesos sites from Atapuerca, Spain, complement previous works on lower first and second premolars and upper first molars. A morphological gradient consisting of the change from asymmetric to symmetric upper premolars and a marked reduction of the lingual cusp in recent Homo species has been observed in both premolars. Although percentages of correct classification based on upper premolar morphologies are not very high, significant morphological differences between Neanderthals (and European middle Pleistocene fossils) and modern humans have been identified, especially in upper second premolars. The study of morphological integration between premolar morphologies reveals significant correlations that are weaker between upper premolars than between lower ones and significant correlations between antagonists. These results have important implications for understanding the genetic and functional factors underlying dental phenotypic variation and covariation. Copyright © 2011 Elsevier Ltd. All rights reserved.

  8. Ancestry Estimation in Forensic Anthropology: Geometric Morphometric versus Standard and Nonstandard Interlandmark Distances.

    Science.gov (United States)

    Katherine Spradley, M; Jantz, Richard L

    2016-07-01

    Standard cranial measurements are commonly used for ancestry estimation; however, 3D digitizers have made cranial landmark data collection and geometric morphometric (GM) analyses more popular within forensic anthropology. Yet there has been little focus on which data type works best. The goal of the present research is to test the discrimination ability of standard and nonstandard craniometric measurements and data derived from GM analysis. A total of 31 cranial landmarks were used to generate 465 interlandmark distances, including a subset of 20 commonly used measurements, and to generate principal component scores from procrustes coordinates. All were subjected to discriminant function analysis to ascertain which type of data performed best for ancestry estimation of American Black and White and Hispanic males and females. The nonstandard interlandmark distances generated the highest classification rates for females (90.5%) and males (88.2%). Using nonstandard interlandmark distances over more commonly used measurements leads to better ancestry estimates for our current population structure. © 2016 American Academy of Forensic Sciences.

  9. Facial orientation and facial shape in extant great apes: a geometric morphometric analysis of covariation.

    Science.gov (United States)

    Neaux, Dimitri; Guy, Franck; Gilissen, Emmanuel; Coudyzer, Walter; Vignaud, Patrick; Ducrocq, Stéphane

    2013-01-01

    The organization of the bony face is complex, its morphology being influenced in part by the rest of the cranium. Characterizing the facial morphological variation and craniofacial covariation patterns in extant hominids is fundamental to the understanding of their evolutionary history. Numerous studies on hominid facial shape have proposed hypotheses concerning the relationship between the anterior facial shape, facial block orientation and basicranial flexion. In this study we test these hypotheses in a sample of adult specimens belonging to three extant hominid genera (Homo, Pan and Gorilla). Intraspecific variation and covariation patterns are analyzed using geometric morphometric methods and multivariate statistics, such as partial least squared on three-dimensional landmarks coordinates. Our results indicate significant intraspecific covariation between facial shape, facial block orientation and basicranial flexion. Hominids share similar characteristics in the relationship between anterior facial shape and facial block orientation. Modern humans exhibit a specific pattern in the covariation between anterior facial shape and basicranial flexion. This peculiar feature underscores the role of modern humans' highly-flexed basicranium in the overall integration of the cranium. Furthermore, our results are consistent with the hypothesis of a relationship between the reduction of the value of the cranial base angle and a downward rotation of the facial block in modern humans, and to a lesser extent in chimpanzees.

  10. Homo floresiensis contextualized: a geometric morphometric comparative analysis of fossil and pathological human samples.

    Directory of Open Access Journals (Sweden)

    Karen L Baab

    Full Text Available The origin of hominins found on the remote Indonesian island of Flores remains highly contentious. These specimens may represent a new hominin species, Homo floresiensis, descended from a local population of Homo erectus or from an earlier (pre-H. erectus migration of a small-bodied and small-brained hominin out of Africa. Alternatively, some workers suggest that some or all of the specimens recovered from Liang Bua are pathological members of a small-bodied modern human population. Pathological conditions proposed to explain their documented anatomical features include microcephaly, myxoedematous endemic hypothyroidism ("cretinism" and Laron syndrome (primary growth hormone insensitivity. This study evaluates evolutionary and pathological hypotheses through comparative analysis of cranial morphology. Geometric morphometric analyses of landmark data show that the sole Flores cranium (LB1 is clearly distinct from healthy modern humans and from those exhibiting hypothyroidism and Laron syndrome. Modern human microcephalic specimens converge, to some extent, on crania of extinct species of Homo. However in the features that distinguish these two groups, LB1 consistently groups with fossil hominins and is most similar to H. erectus. Our study provides further support for recognizing the Flores hominins as a distinct species, H. floresiensis, whose affinities lie with archaic Homo.

  11. Homo floresiensis Contextualized: A Geometric Morphometric Comparative Analysis of Fossil and Pathological Human Samples

    Science.gov (United States)

    Baab, Karen L.; McNulty, Kieran P.; Harvati, Katerina

    2013-01-01

    The origin of hominins found on the remote Indonesian island of Flores remains highly contentious. These specimens may represent a new hominin species, Homo floresiensis, descended from a local population of Homo erectus or from an earlier (pre-H. erectus) migration of a small-bodied and small-brained hominin out of Africa. Alternatively, some workers suggest that some or all of the specimens recovered from Liang Bua are pathological members of a small-bodied modern human population. Pathological conditions proposed to explain their documented anatomical features include microcephaly, myxoedematous endemic hypothyroidism (“cretinism”) and Laron syndrome (primary growth hormone insensitivity). This study evaluates evolutionary and pathological hypotheses through comparative analysis of cranial morphology. Geometric morphometric analyses of landmark data show that the sole Flores cranium (LB1) is clearly distinct from healthy modern humans and from those exhibiting hypothyroidism and Laron syndrome. Modern human microcephalic specimens converge, to some extent, on crania of extinct species of Homo. However in the features that distinguish these two groups, LB1 consistently groups with fossil hominins and is most similar to H. erectus. Our study provides further support for recognizing the Flores hominins as a distinct species, H. floresiensis, whose affinities lie with archaic Homo. PMID:23874886

  12. Resolving relationships between several Neolithic and Mesolithic populations in Northern Eurasia using geometric morphometrics.

    Science.gov (United States)

    Stansfield Bulygina, Ekaterina; Rasskasova, Anna; Berezina, Natalia; Soficaru, Andrei D

    2017-09-01

    Remains from several Eastern European and Siberian Mesolithic and Neolithic sites are analysed to clarify their biological relationships. We assume that groups' geographical distances correlate with genetic and, therefore, morphological distances between them. Material includes complete male crania from several Mesolithic and Neolithic burial sites across Northern Eurasia and from several modern populations. Geometric morphometrics and multivariate statistical techniques are applied to explore morphological trends, group distances, and correlations with their geographical position, climate, and the time of origin. Despite an overlap in the morphology among the modern and archeological groups, some of them show significant morphological distances. Geographical parameters account for only a small proportion of cranial variation in the sample, with larger variance explained by geography and age together. Expectations of isolation by distance are met in some but not in all cases. Climate accounts for a large proportion of autocorrelation with geography. Nearest-neighbor joining trees demonstrate group relationships predicted by the regression on geography and on climate. The obtained results are discussed in application to relationships between particular groups. Unlike the Ukrainian Mesolithic, the Yuzhny Oleni Ostrov Mesolithic displays a high morphological affinity with several groups from Northern Eurasia of both European and Asian origin. A possibility of a common substrate for the Yuzhny Oleni Ostrov Mesolithic and Siberian Neolithic groups is reviewed. The Siberian Neolithic is shown to have morphological connection with both modern Siberian groups and the Native North Americans. © 2017 Wiley Periodicals, Inc.

  13. The shape of the hominoid proximal femur: a geometric morphometric analysis

    Science.gov (United States)

    Harmon, Elizabeth H

    2007-01-01

    As part of the hip joint, the proximal femur is an integral locomotor component. Although a link between locomotion and the morphology of some aspects of the proximal femur has been identified, inclusive shapes of this element have not been compared among behaviourally heterogeneous hominoids. Previous analyses have partitioned complex proximal femoral morphology into discrete features (e.g. head, neck, greater trochanter) to facilitate conventional linear measurements. In this study, three-dimensional geometric morphometrics are used to examine the shape of the proximal femur in hominoids to determine whether femoral shape co-varies with locomotor category. Fourteen landmarks are recorded on adult femora of Homo, Pan, Gorilla, Pongo and Hylobates. Generalized Procrustes analysis (GPA) is used to adjust for position, orientation and scale among landmark configurations. Principal components analysis is used to collapse and compare variation in residuals from GPA, and thin-plate spline analysis is used to visualize shape change among taxa. The results indicate that knucklewalking African apes are similar to one another in femoral shape, whereas the more suspensory Asian apes diverge from the African ape pattern. The shape of the human and orangutan proximal femur converge, a result that is best explained in terms of the distinct requirements for locomotion in each group. These findings suggest that the shape of the proximal femur is brought about primarily by locomotor behaviour. PMID:17310545

  14. The role of wing geometric morphometrics in the identification of sandflies within the subgenus Lutzomyia.

    Science.gov (United States)

    Giordani, B F; Andrade, A J; Galati, E A B; Gurgel-Gonçalves, R

    2017-12-01

    The Lutzomyia subgenus (Diptera: Psychodidae) includes sibling species with morphologically indistinguishable females. The aims of this study were to analyse variations in the size and shape of wings of species within the Lutzomyia subgenus and to assess whether these analyses might be useful in their identification. Wings (n = 733) of 18 species deposited in Brazilian collections were analysed by geometric morphometrics, using other genera and subgenera as outgroups. Shape variation was summarized in multivariate analyses and differences in wing size among species were tested by analysis of variance. The results showed significant variation in the sizes and shapes of wings of different Lutzomyia species. Two clusters within the Lutzomyia subgenus were distinguished in analyses of both males and females. In Cluster 1 (Lutzomyia ischnacantha, Lutzomyia cavernicola, Lutzomyia almerioi, Lutzomyia forattinii, Lutzomyia renei and Lutzomyia battistinii), scores for correct reclassification were high (females, kappa = 0.91; males, kappa = 0.90), whereas in Cluster 2 (Lutzomyia alencari, Lutzomyia ischyracantha, Lutzomyia cruzi, Lutzomyia longipalpis, Lutzomyia gaminarai and Lutzomyia lichyi), scores for correct reclassification were low (females, kappa = 0.42; males, kappa = 0.48). Wing geometry was useful in the identification of some species of the Lutzomyia subgenus, but did not allow the identification of sibling species such as L. longipalpis and L. cruzi. © 2017 The Royal Entomological Society.

  15. A new interpretation of the bee fossil Melitta willardi Cockerell (Hymenoptera, Melittidae) based on geometric morphometrics of the wing

    OpenAIRE

    Dewulf,Alexandre; De Meulemeester,Thibaut; Dehon,Manuel; Engel,Michael; Michez,Denis

    2014-01-01

    Abstract Although bees are one of the major lineages of pollinators and are today quite diverse, few well-preserved fossils are available from which to establish the tempo of their diversification/extinction since the Early Cretaceous. Here we present a reassessment of the taxonomic affinities of Melitta willardi Cockerell 1909, preserved as a compression fossil from the Florissant shales of Colorado, USA. Based on geometric morphometric wing shape analyses M. willardi cannot be confidently a...

  16. Small-scale variations in leaf shape under anthropogenic disturbance in dioecious forest forb mercurialis perennis: A geometric morphometric examination

    Directory of Open Access Journals (Sweden)

    Vujić Vukica

    2016-01-01

    Full Text Available Plants are exposed to increasing levels of diverse human activities that have profound effects on their overall morphology and, specifically, on leaf morphology. Anthropogenic disturbances in urban and suburban forest recreational sites are attracting growing research interest. To explore the persisting recreational impact on leaf shape and size, we conducted a field study on the dioecious forb Mercurialis perennis L. (Euphorbiaceae, typical for undisturbed understory communities. We selected adjacent sites in a suburban forest, which experience contrasting regimes of disturbance by human trampling under otherwise concordant natural conditions. Patterns of leaf shape and size variation and putative sex-specific response to disturbance were analyzed using a geometric morphometric approach. In addition to leaf-level data, plant height, internode and leaf number were analyzed to explore the same response at the whole-plant level. The results show significant variations associated with disturbance at both levels: plants growing under a heavy disturbance regime had shorter stems with a greater number of wider and shorter leaves. Significant differences between sites were also found for leaf size, with larger leaves observed in an undisturbed site. The effects of sex and sex x site interaction on leaf size and shape were nonsignificant, pointing to the absence of sexual dimorphism and sex-specific response to disturbance. Contrary to leaf shape and size, all three analyzed shoot traits showed highly significant sexual dimorphism, with male plants being higher and having higher leaf and internode count. [Projekat Ministarstva nauke Republike Srbije, br. 173025

  17. Maternal environment and craniofacial growth: geometric morphometric analysis of mandibular shape changes with in utero thyroxine overexposure in mice.

    Science.gov (United States)

    Kesterke, Matthew J; Judd, Margaret A; Mooney, Mark P; Siegel, Michael I; Elsalanty, Mohammed; Howie, R Nicole; Weinberg, Seth M; Cray, James J

    2018-07-01

    An estimated 3% of US pregnancies are affected by maternal thyroid dysfunction, with between one and three of every 1000 pregnancies being complicated by overactive maternal thyroid levels. Excess thyroid hormones are linked to neurological impairment and excessive craniofacial variation, affecting both endochondral and intramembranous bone. Using a geometric morphometric approach, this study evaluates the role of in utero thyroxine overexposure on the growth of offspring mandibles in a sample of 241 mice. Canonical variate analysis utilized 16 unilateral mandibular landmarks obtained from 3D micro-computed tomography to assess shape changes between unexposed controls (n = 63) and exposed mice (n = 178). By evaluating shape changes in the mandible among three age groups (15, 20 and 25 days postnatal) and different dosage levels (low, medium and high), this study found that excess maternal thyroxine alters offspring mandibular shape in both age- and dosage-dependent manners. Group differences in overall shape were significant (P < 0.001), and showed major changes in regions of the mandible associated with muscle attachment (coronoid process, gonial angle) and regions of growth largely governed by articulation with the cranial base (condyle) and occlusion (alveolus). These results compliment recent studies demonstrating that maternal thyroxine levels can alter the cranial base and cranial vault of offspring, contributing to a better understanding of both normal and abnormal mandibular development, as well as the medical implications of craniofacial growth and development. © 2018 Anatomical Society.

  18. A geometric morphometric study of a Middle Pleistocene cranium from Hexian, China.

    Science.gov (United States)

    Cui, Yaming; Wu, Xinzhi

    2015-11-01

    The Hexian calvarium is one of the most complete and well-preserved Homo erectus fossils ever found in east Asia, apart from the Zhoukoudian specimens. Various methods bracket the age of the Hexian fossil to between 150 and 412 ka (thousands of years ago). The Hexian calvarium has been considered to be H. erectus given its morphological similarities to Zhoukoudian and Javan H. erectus. However, discussion continues regarding the affinities of the Hexian specimen with other H. erectus fossils. The arguments mainly focus on its relationships to other Asian H. erectus fossils, including those from both China and Java. To better determine the affinities of the Hexian cranium, our study used 3D landmark and semilandmark geometric morphometric techniques and multivariate statistical analyses to quantify the shape of the neurocranium and to compare the Hexian cranium to other H. erectus specimens. The results of this study confirmed the morphological similarities between Hexian and Chinese H. erectus in overall morphology, and particularly in the structure of the frontal bone and the posterior part of the neurocranium. Although the Hexian specimen shows the strongest connection to Chinese H. erectus, the morphology of the lateral neurocranium resembles early Indonesian H. erectus specimens, possibly suggesting shared common ancestry or gene flow from early Indonesian populations. Overall cranial and frontal bone morphology are strongly influenced by geography. Although geographically intermediate between Zhoukoudian and Indonesian H. erectus, the Hexian specimen does not form part of an obvious morphological gradient with regard to overall cranial shape. Copyright © 2015 Elsevier Ltd. All rights reserved.

  19. Functional geometric morphometric analysis of masticatory system ontogeny in papionin primates.

    Science.gov (United States)

    Singleton, Michelle

    2015-01-01

    The three-dimensional configuration of the primate masticatory system is constrained by the need to maximize bite forces while avoiding distraction of the temporomandibular joint (TMJ). Within these bounds, shape variation has predictable effects on functional capacities such as mechanical advantage and gape. In this study, geometric morphometric analysis is used to investigate the ontogeny of masticatory function in papionin monkeys and test the hypothesis that biomechanical constraints determine the location of molar eruption. This "constrained eruption hypothesis" predicts that the distalmost molar (DMX) will occupy a consistent location anterior to the TMJ and that jaw adductor muscles will maintain consistent positions relative to both DMX and TMJ. Craniometric landmarks were digitized on cross-sectional ontogenetic series of nine papionin species. Form-space PCA of Procrustes residuals, visualization of Bookstein shape coordinates, and nonparametric ANOVA were used to identify ontogenetic shape trends and test for significant ontogenetic changes in relative landmark positions. In most taxa, DMX maintains a consistent position relative to the TMJ while the anterior dentition migrates anteriorly. Where significant intraspecific ontogenetic differences occur, they involve anterior migration of DMX in later dental stages, likely due to late adolescent growth of the posterior palate. Attachments of the anterior temporalis and deep masseter also maintain consistent positions relative to the TMJ; however, the superficial masseter migrates anteriorly throughout ontogeny. All muscle attachments migrate laterally relative to the TMJ, reflecting positive scaling of adductor PCSA. Overall, results support the constrained eruption hypothesis and suggest mechanisms by which functional capacity is maintained during ontogeny. © 2014 Wiley Periodicals, Inc.

  20. Use of geometric morphometrics to identify ecophenotypic variation of juvenile Persian sturgeon Acipenser persicus

    Directory of Open Access Journals (Sweden)

    Shima Bakhshalizadeh

    2017-06-01

    Full Text Available Study of phenotypic variation is essential for identifying discrete phenotypic stocks. We sampled immature Persian sturgeon from the eastern and western portion of the southern Caspian Sea to test for morphological differences that could predict the ecophenotypic variation of Persian sturgeon. Geometric morphometric methods were used to quantify body shape. Configuration of landmark coordinates of fish body were scaled, translated and rotated using generalized Procrustes analysis, followed by univariate analysis of variance of resulting shape coordinates to evaluate potential morphological differences between regions. A principal component analysis was carried out to reduce the number of dimensions without the loss of information. The discriminate function analysis was performed to determine the efficacy of body landmarks for discrimination by geographic variants. Within-group linkage was inferred for dendrogram clusters using Pearson correlation distance on the basis of the average linkage method as a complement for discriminate analysis. Principle component analysis revealed that the largest differences were in body size. Most notable were differences in distance between head landmarks and the dorsal fin between eastern and western regions. Fish from the western region exhibited a longer distance from head landmarks to the dorsal fin than fish from the eastern region. Furthermore, the ventral portion of fish from the western region was longer than that of the eastern individuals. These findings show that juvenile Persian sturgeon already possess morphological traits that can be used to discriminate fish from different regions. Furthermore, these differences are discernible in spite of the volume of artificially-inseminated sturgeon larva that have been released during the past 40 years.

  1. Geometric morphometric evaluation of cervical vertebrae shape and its relationship to skeletal maturation.

    Science.gov (United States)

    Chatzigianni, Athina; Halazonetis, Demetrios J

    2009-10-01

    Cervical vertebrae shape has been proposed as a diagnostic factor for assessing skeletal maturation in orthodontic patients. However, evaluation of vertebral shape is mainly based on qualitative criteria. Comprehensive quantitative measurements of shape and assessments of its predictive power have not been reported. Our aims were to measure vertebral shape by using the tools of geometric morphometrics and to evaluate the correlation and predictive power of vertebral shape on skeletal maturation. Pretreatment lateral cephalograms and corresponding hand-wrist radiographs of 98 patients (40 boys, 58 girls; ages, 8.1-17.7 years) were used. Skeletal age was estimated from the hand-wrist radiographs. The first 4 vertebrae were traced, and 187 landmarks (34 fixed and 153 sliding semilandmarks) were used. Sliding semilandmarks were adjusted to minimize bending energy against the average of the sample. Principal components analysis in shape and form spaces was used for evaluating shape patterns. Shape measures, alone and combined with centroid size and age, were assessed as predictors of skeletal maturation. Shape alone could not predict skeletal maturation better than chronologic age. The best prediction was achieved with the combination of form space principal components and age, giving 90% prediction intervals of approximately 200 maturation units in the girls and 300 units in the boys. Similar predictive power could be obtained by using centroid size and age. Vertebrae C2, C3, and C4 gave similar results when examined individually or combined. C1 showed lower correlations, signifying lower integration with hand-wrist maturation. Vertebral shape is strongly correlated to skeletal age but does not offer better predictive value than chronologic age.

  2. Experimental sharp force injuries to ribs: Multimodal morphological and geometric morphometric analyses using micro-CT, macro photography and SEM.

    Science.gov (United States)

    Komo, Larissa; Grassberger, Martin

    2018-07-01

    Tool marks on bones induced by knife blades can be analysed morphometrically in order to enable an allocation of the suspected "inflicting weapon" to the particular morphology of the bone lesions. Until now, geometric morphometrics has not been used to analyse the morphology of knife lesions on fleshed bones in detail. By using twelve experimental knives and a drop weight tower, stab/cut injuries were inflicted on untreated pig ribs. The morphology of the experimentally produced lesions was subsequently recorded with three imaging techniques (μCT, macro photography and SEM) and analysed with different morphometric software (Amira, tps and Morpheus). Based on the measured distances between the walls of the kerf marks, which corresponded to the thickness of the blade, one could conclude to the respective blade thickness with a deviation of max. ±0.35mm and match the injuries to the knives. With subsequent reanalysis after maceration, an average shrinkage factor up to 8.6% was observed. Among the three imaging techniques used in this study, μCT was the most accurate and efficient technique, particularly because it represented the only non-destructive modality to document injuries without maceration, even though μCT is more expensive and time-consuming as well as less accessible than a macro SLR-camera or a SEM. For optimal characterizations of the blades' and kerfs' shapes the software tps proofed to be the best choice. Accordingly, geometric morphometrics could serve as a tool in forensic investigations concerning kerf marks. Copyright © 2018 Elsevier B.V. All rights reserved.

  3. Geometrical approach to tumor growth.

    Science.gov (United States)

    Escudero, Carlos

    2006-08-01

    Tumor growth has a number of features in common with a physical process known as molecular beam epitaxy. Both growth processes are characterized by the constraint of growth development to the body border, and surface diffusion of cells and particles at the growing edge. However, tumor growth implies an approximate spherical symmetry that makes necessary a geometrical treatment of the growth equations. The basic model was introduced in a former paper [C. Escudero, Phys. Rev. E 73, 020902(R) (2006)], and in the present work we extend our analysis and try to shed light on the possible geometrical principles that drive tumor growth. We present two-dimensional models that reproduce the experimental observations, and analyze the unexplored three-dimensional case, for which interesting conclusions on tumor growth are derived.

  4. Geometrical approach to tumor growth

    OpenAIRE

    Escudero, Carlos

    2006-01-01

    Tumor growth has a number of features in common with a physical process known as molecular beam epitaxy. Both growth processes are characterized by the constraint of growth development to the body border, and surface diffusion of cells/particles at the growing edge. However, tumor growth implies an approximate spherical symmetry that makes necessary a geometrical treatment of the growth equations. The basic model was introduced in a former article [C. Escudero, Phys. Rev. E 73, 020902(R) (200...

  5. Giant ants and their shape: revealing relationships in the genus Titanomyrma with geometric morphometrics

    Directory of Open Access Journals (Sweden)

    Julian Katzke

    2018-01-01

    Full Text Available Shape is a natural phenomenon inherent to many different lifeforms. A modern technique to analyse shape is geometric morphometrics (GM, which offers a whole range of methods concerning the pure shape of an object. The results from these methods have provided new insights into biological problems and have become especially useful in the fields of entomology and palaeontology. Despite the conspicuous successes in other hymenopteran groups, GM analysis of wings and fossil wings of Formicidae has been neglected. Here we tested if landmarks defining the wing shape of fossil ants that belong to the genus Titanomyrma are reliable and if this technique is able to expose relationships among different groups of the largest Hymenoptera that ever lived. This study comprises 402 wings from 362 ants that were analysed and assigned with the GM methods linear discriminant function analysis, principal component analysis, canonical variate analysis, and regression. The giant ant genus Titanomyrma and the parataxon Formicium have different representatives that are all very similar but these modern methods were able to distinguish giant ant types even to the level of the sex. Thirty-five giant ant specimens from the Eckfeld Maar were significantly differentiable from a collection of Messel specimens that consisted of 187 Titanomyrma gigantea females and 42 T. gigantea males, and from 74 Titanomyrma simillima females and 21 T. simillima males. Out of the 324 Messel ants, 127 are newly assigned to a species and 223 giant ants are newly assigned to sex with GM analysis. All specimens from Messel fit to the two species. Moreover, shape affinities of these groups and the species Formicium brodiei, Formicium mirabile, and Formicium berryi, which are known only from wings, were investigated. T. gigantea stands out with a possible female relative in one of the Eckfeld specimens whereas the other groups show similar shape patterns that are possibly plesiomorphic. Formicidae

  6. Giant ants and their shape: revealing relationships in the genus Titanomyrma with geometric morphometrics.

    Science.gov (United States)

    Katzke, Julian; Barden, Phillip; Dehon, Manuel; Michez, Denis; Wappler, Torsten

    2018-01-01

    Shape is a natural phenomenon inherent to many different lifeforms. A modern technique to analyse shape is geometric morphometrics (GM), which offers a whole range of methods concerning the pure shape of an object. The results from these methods have provided new insights into biological problems and have become especially useful in the fields of entomology and palaeontology. Despite the conspicuous successes in other hymenopteran groups, GM analysis of wings and fossil wings of Formicidae has been neglected. Here we tested if landmarks defining the wing shape of fossil ants that belong to the genus Titanomyrma are reliable and if this technique is able to expose relationships among different groups of the largest Hymenoptera that ever lived. This study comprises 402 wings from 362 ants that were analysed and assigned with the GM methods linear discriminant function analysis, principal component analysis, canonical variate analysis, and regression. The giant ant genus Titanomyrma and the parataxon Formicium have different representatives that are all very similar but these modern methods were able to distinguish giant ant types even to the level of the sex. Thirty-five giant ant specimens from the Eckfeld Maar were significantly differentiable from a collection of Messel specimens that consisted of 187 Titanomyrma gigantea females and 42 T. gigantea males, and from 74 Titanomyrma simillima females and 21 T. simillima males. Out of the 324 Messel ants, 127 are newly assigned to a species and 223 giant ants are newly assigned to sex with GM analysis. All specimens from Messel fit to the two species. Moreover, shape affinities of these groups and the species Formicium brodiei , Formicium mirabile , and Formicium berryi , which are known only from wings, were investigated. T. gigantea stands out with a possible female relative in one of the Eckfeld specimens whereas the other groups show similar shape patterns that are possibly plesiomorphic. Formicidae are one of the

  7. Geometric approach to soliton equations

    International Nuclear Information System (INIS)

    Sasaki, R.

    1979-09-01

    A class of nonlinear equations that can be solved in terms of nxn scattering problem is investigated. A systematic geometric method of exploiting conservation laws and related equations, the so-called prolongation structure, is worked out. The nxn problem is reduced to nsub(n-1)x(n-1) problems and finally to 2x2 problems, which have been comprehensively investigated recently by the author. A general method of deriving the infinite numbers of polynomial conservation laws for an nxn problem is presented. The cases of 3x3 and 2x2 problems are discussed explicitly. (Auth.)

  8. Elemental microchemistry, fatty acid profile and geometric morphometrics signatures of goose barnacles (Pollicipes pollicipes reveal their place of origin

    Directory of Open Access Journals (Sweden)

    Rui Albuquerque

    2014-06-01

    Full Text Available Seafood plays an important role in the socioeconomic, gastronomy and cultural heritage of Portuguese coastal communities. In the Iberian Peninsula, the goose barnacle Pollicipes pollicipes is the intertidal biological resource most heavily exploited by man, resulting on overexploitation of stocks. In the MPA of BNR P.pollicipes harvesting is however strictly regulated, making it a good example of marine resources management. Analytical methods able to identify the origin of goose barnacle would be an important tool to help the management of the trade. For such purpose, we investigated whether P. pollicipes have site-specific differences based on its elemental microchemistry (EM, fatty acid profile (FA and capitulum shape (CS. The analysis was performed on specimens collected from 3 sites in the BNR and 7 along a 300 km stretch of the Portuguese coast. For each individual we analysed the largest lateral shell for EM using ICP-MS, the FA content of the muscle using GC-FID, and the CS using geometric morphometrics. Discriminant function analyses (DFA for both EM and FA separately provided a high reclassification success (77.6% and 99% respectively, of cross-validated cases correctly classified, while for EM combined with FA allowed for a 100% reclassification success. DFA analysis based only on CS, revealed a low classification success (29.6%. These results show that EM and FA signatures can be a powerful tool to infer goose barnacles origin. Such “fingerprinting” approach can be used to track and identify goose barnacles origin, helping in establishing an origin certificate and increasing the potential value of biological resources from Portuguese MPAs.

  9. Geometric morphometric methods for three-dimensional virtual reconstruction of a fragmented cranium: the case of Angelo Poliziano.

    Science.gov (United States)

    Benazzi, S; Stansfield, E; Milani, C; Gruppioni, G

    2009-07-01

    The process of forensic identification of missing individuals is frequently reliant on the superimposition of cranial remains onto an individual's picture and/or facial reconstruction. In the latter, the integrity of the skull or a cranium is an important factor in successful identification. Here, we recommend the usage of computerized virtual reconstruction and geometric morphometrics for the purposes of individual reconstruction and identification in forensics. We apply these methods to reconstruct a complete cranium from facial remains that allegedly belong to the famous Italian humanist of the fifteenth century, Angelo Poliziano (1454-1494). Raw data was obtained by computed tomography scans of the Poliziano face and a complete reference skull of a 37-year-old Italian male. Given that the amount of distortion of the facial remains is unknown, two reconstructions are proposed: The first calculates the average shape between the original and its reflection, and the second discards the less preserved left side of the cranium under the assumption that there is no deformation on the right. Both reconstructions perform well in the superimposition with the original preserved facial surface in a virtual environment. The reconstruction by means of averaging between the original and reflection yielded better results during the superimposition with portraits of Poliziano. We argue that the combination of computerized virtual reconstruction and geometric morphometric methods offers a number of advantages over traditional plastic reconstruction, among which are speed, reproducibility, easiness of manipulation when superimposing with pictures in virtual environment, and assumptions control.

  10. Crowdsourced geometric morphometrics enable rapid large-scale collection and analysis of phenotypic data

    OpenAIRE

    Chang, Jonathan; Chang, Jonathan

    2015-01-01

    1. Advances in genomics and informatics have enabled the production of large phylogenetic trees. However, the ability to collect large phenotypic datasets has not kept pace. 2. Here, we present a method to quickly and accurately gather morphometric data using crowdsourced image-based landmarking. 3. We find that crowdsourced workers perform similarly to experienced morphologists on the same digitization tasks. We also demonstrate the speed and accuracy of our method on seven families of ray-f...

  11. Aspects of the geometrical approach to supermanifolds

    International Nuclear Information System (INIS)

    Rogers, A.

    1984-01-01

    Various topics in the theory and application of the geometrical approach to supermanifolds are discussed. The construction of the superspace used in supergravity over an arbitrary spacetime manifold is described. Super Lie groups and their relation to graded Lie algebras (and more general structures referred to as 'graded Lie modules') are discussed, with examples. Certain supermanifolds, allowed in the geometric approach (using the fine topology), but having no analogue in the algebraic approach, are discussed. Finally lattice supersymmetry, and its relation to the differential geometry of supermanifolds, is discussed. (orig.)

  12. A new interpretation of the bee fossil Melitta willardi Cockerell (Hymenoptera, Melittidae) based on geometric morphometrics of the wing.

    Science.gov (United States)

    Dewulf, Alexandre; De Meulemeester, Thibaut; Dehon, Manuel; Engel, Michael S; Michez, Denis

    2014-01-01

    Although bees are one of the major lineages of pollinators and are today quite diverse, few well-preserved fossils are available from which to establish the tempo of their diversification/extinction since the Early Cretaceous. Here we present a reassessment of the taxonomic affinities of Melitta willardiCockerell 1909, preserved as a compression fossil from the Florissant shales of Colorado, USA. Based on geometric morphometric wing shape analyses M. willardi cannot be confidently assigned to the genus Melitta Kirby (Anthophila, Melittidae). Instead, the species exhibits phenotypic affinity with the subfamily Andreninae (Anthophila, Andrenidae), but does not appear to belong to any of the known genera therein. Accordingly, we describe a new genus, Andrenopteryx gen. n., based on wing shape as well as additional morphological features and to accommodate M. willardi. The new combination Andrenopteryx willardi (Cockerell) is established.

  13. A new interpretation of the bee fossil Melitta willardi Cockerell (Hymenoptera, Melittidae based on geometric morphometrics of the wing

    Directory of Open Access Journals (Sweden)

    Alexandre Dewulf

    2014-03-01

    Full Text Available Although bees are one of the major lineages of pollinators and are today quite diverse, few well-preserved fossils are available from which to establish the tempo of their diversification/extinction since the Early Cretaceous. Here we present a reassessment of the taxonomic affinities of Melitta willardi Cockerell 1909, preserved as a compression fossil from the Florissant shales of Colorado, USA. Based on geometric morphometric wing shape analyses M. willardi cannot be confidently assigned to the genus Melitta Kirby (Anthophila, Melittidae. Instead, the species exhibits phenotypic affinity with the subfamily Andreninae (Anthophila, Andrenidae, but does not appear to belong to any of the known genera therein. Accordingly, we describe a new genus, Andrenopteryx gen. n., based on wing shape as well as additional morphological features and to accommodate M. willardi. The new combination Andrenopteryx willardi (Cockerell is established.

  14. The shape variability of human tibial epiphyses in an early medieval Great Moravian population (9th-10th century AD): A geometric morphometric assessment

    Czech Academy of Sciences Publication Activity Database

    Brzobohatá, Hana; Krajíček, V.; Velemínský, P.; Poláček, Lumír; Velemínská, J.

    2014-01-01

    Roč. 71, č. 3 (2014), s. 219-236 ISSN 0003-5548 Grant - others:GA UK(CZ) 613012 Institutional support: RVO:67985912 ; RVO:68081758 Keywords : geometric morphometrics * tibia * sexual dimorphism * Great Moravian Empire * Early Middle Ages * socioeconomic status * optical scanning Subject RIV: AC - Archeology, Anthropology, Ethnology Impact factor: 0.250, year: 2014

  15. The Southern Divide: Testing morphological differences among bifacial points from southern and southeastern Brazil using geometric morphometrics

    Directory of Open Access Journals (Sweden)

    Mercedes Okumura

    2016-03-01

    Full Text Available Bifacial points have been used to characterize the “Umbu” tradition in southern and southeastern Brazil. This archaeological tradition has been related to sites dated from the late Pleistocene-early Holocene boundary to near historical times. Such a huge temporal range and vast territory have suggested the existence of greater diversity within this tradition that has been ignored thus far due to the lack of systematic regional studies of such points. Through geometric morphometric analysis, this article aims to test the hypothesis that there are substantial differences in the Holocene bifacial points associated with the Umbu tradition in southeastern Brazil. Five landmarks were digitized in standardized photographs from 658 points from the states of São Paulo, Paraná, Santa Catarina, and Rio Grande do Sul. The results show that points made by groups from southeastern Brazil (São Paulo state present a very distinct morphology (size and shape in comparison to  those made by the southern groups (Paraná, Santa Catarina and Rio Grande do Sul. This would indicate a regional identity shared only by some groups from São Paulo (at least regarding the projectile points. It is possible that Umbu tradition presents a more restricted range, both in chronological and spatial terms, than the one proposed so far.

  16. Describing shell shape variations and sexual dimorphism of Golden Apple Snail, Pomacea caniculata (Lamarck, 1822 using geometric morphometric analysis

    Directory of Open Access Journals (Sweden)

    C.C. Cabuga

    2017-09-01

    Full Text Available Pomacea caniculata or Golden Apple Snail (GAS existed to be a rice pest in the Philippines and in Asia. Likewise, geographic location also contributes its increasing populations thus making it invasive among freshwater habitats and rice field areas. This study was conducted in order to describe shell shape variations and sexual dimorphism among the populations of P. caniculata. A total of 180 were randomly collected in the three lakes of Esperanza, Agusan del Sur (Lake Dakong Napo, Lake Oro, and Lake Cebulan, of which each lake comprised of 60 samples (30 males and 30 females. To determine the variations and sexual dimorphism in the shell shape of golden apple snail, coordinates was administered to relative warp analysis and the resulting data were subjected to Multivariate Analysis of Variance (MANOVA, Principal Component Analysis (PCA and Canonical Variate Analysis (CVA. The results show statistically significant (P<0.05 from the appended male and female dorsal and ventral/apertural portion. While male and female spire height, body size, and shell shape opening also shows significant variations. These phenotypic distinctions could be associated with geographic isolation, predation and nutrient component of the gastropods. Thus, the importance of using geometric morphometric advances in describing sexual dimorphism in the shell shape of P. caniculata.

  17. Frontonasal dysmorphology in bipolar disorder by 3D laser surface imaging and geometric morphometrics: comparisons with schizophrenia.

    LENUS (Irish Health Repository)

    Hennessy, Robin J

    2010-09-01

    Any developmental relationship between bipolar disorder and schizophrenia engenders continuing debate. As the brain and face emerge in embryological intimacy, brain dysmorphogenesis is accompanied by facial dysmorphogenesis. 3D laser surface imaging was used to capture the facial surface of 13 male and 14 female patients with bipolar disorder in comparison with 61 male and 75 female control subjects and with 37 male and 32 female patients with schizophrenia. Surface images were analysed using geometric morphometrics and 3D visualisations to identify domains of facial shape that distinguish bipolar patients from controls and bipolar patients from those with schizophrenia. Both male and female bipolar patients evidenced significant facial dysmorphology: common to male and female patients was overall facial widening, increased width of nose, narrowing of mouth and upward displacement of the chin; dysmorphology differed between male and female patients for nose length, lip thickness and tragion height. There were few morphological differences in comparison with schizophrenia patients. That dysmorphology of the frontonasal prominences and related facial regions in bipolar disorder is more similar to than different from that found in schizophrenia indicates some common dysmorphogenesis. Bipolar disorder and schizophrenia might reflect similar insult(s) acting over slightly differing time-frames or slightly differing insult(s) acting over a similar time-frame.

  18. A geometric morphometric analysis of hominin upper second and third molars, with particular emphasis on European Pleistocene populations.

    Science.gov (United States)

    Gómez-Robles, Aida; Bermúdez de Castro, José María; Martinón-Torres, María; Prado-Simón, Leyre; Arsuaga, Juan Luis

    2012-09-01

    The study of dental morphology by means of geometric morphometric methods allows for a detailed and quantitative comparison of hominin species that is useful for taxonomic assignment and phylogenetic reconstruction. Upper second and third molars have been studied in a comprehensive sample of Plio- and Pleistocene hominins from African, Asian and European sites in order to complete our analysis of the upper postcanine dentition. Intraspecific variation in these two molars is high, but some interspecific trends can be identified. Both molars exhibit a strong reduction of the distal cusps in recent hominin species, namely European Homo heidelbergensis, Homo neanderthalensis and Homo sapiens, but this reduction shows specific patterns and proportions in the three groups. Second molars tend to show four well developed cusps in earlier hominin species and their morphology is only marginally affected by allometric effects. Third molars can be incipiently reduced in earlier species and they evince a significant allometric component, identified both inter- and intraspecifically. European Middle Pleistocene fossils from Sima de los Huesos (SH) show a very strong reduction of these two molars, even more marked than the reduction observed in Neanderthals and in modern human populations. The highly derived shape of SH molars points to an early acquisition of typical Neanderthal dental traits by pre-Neanderthal populations and to a deviation of this population from mean morphologies of other European Middle Pleistocene groups. Copyright © 2012 Elsevier Ltd. All rights reserved.

  19. Geometric morphometrics of male facial shape in relation to physical strength and perceived attractiveness, dominance, and masculinity.

    Science.gov (United States)

    Windhager, Sonja; Schaefer, Katrin; Fink, Bernhard

    2011-01-01

    Evolutionary psychologists claim that women have adaptive preferences for specific male physical traits. Physical strength may be one of those traits, because recent research suggests that women rate faces of physically strong men as more masculine, dominant, and attractive. Yet, previous research has been limited in its ability to statistically map specific male facial shapes and features to corresponding physical measures (e.g., strength) and ratings (e.g., attractiveness). The association of handgrip strength (together with measures of shoulder width, body height, and body fat) and women's ratings of male faces (concerning dominance, masculinity, and attractiveness) were studied in a sample of 26 Caucasian men (aged 18-32 years). Geometric morphometrics was used to statistically assess the covariation of male facial shape with these measures. Statistical results were visualized with thin-plate spline deformation grids along with image unwarping and image averaging. Handgrip strength together with shoulder width, body fat, dominance, and masculinity loaded positively on the first dimension of covariation with facial shape (explaining 72.6%, P attractive and taller men had longer, narrower jaws and wider/fuller lips. Male physical strength was more strongly associated with changes in face shape that relate to perceived masculinity and dominance than to attractiveness. Our study adds to the growing evidence that attractiveness and dominance/masculinity may reflect different aspects of male mate quality. Copyright © 2011 Wiley-Liss, Inc.

  20. Ecomorphological analysis of bovid mandibles from Laetoli Tanzania using 3D geometric morphometrics: Implications for hominin paleoenvironmental reconstruction.

    Science.gov (United States)

    Forrest, Frances L; Plummer, Thomas W; Raaum, Ryan L

    2018-01-01

    The current study describes a new method of mandibular ecological morphology (ecomorphology). Three-dimensional geometric morphometrics (3D GM) was used to quantify mandibular shape variation between extant bovids with different feeding preferences. Landmark data were subjected to generalized Procrustes analysis (GPA), principal components analysis (PCA), and discriminant function analysis (DFA). The PCA resulted in a continuum from grazers to browsers along PC1 and DFA classified 88% or more of the modern specimens to the correct feeding category. The protocol was reduced to a subset of landmarks on the mandibular corpus in order to make it applicable to incomplete fossils. The reduced landmark set resulted in greater overlap between feeding categories but maintained the same continuum as the complete landmark model. The DFA resubstitution and jackknife analyses resulted in classification success rates of 85% and 80%, respectively. The reduced landmark model was applied to fossil mandibles from the Upper Laetolil Beds (∼4.3-3.5 Ma) and Upper Ndolanya Beds (∼2.7-2.6 Ma) at Laetoli, Tanzania in order to assess antelope diet, and indirectly evaluate paleo-vegetation structure. The majority of the fossils were classified by the DFA as browsers or mixed feeders preferring browse. Our results indicate a continuous presence of wooded habitats and are congruent with recent environmental studies at Laetoli indicating a mosaic woodland-bushland-grassland savanna ecosystem. Copyright © 2017 Elsevier Ltd. All rights reserved.

  1. Dispelling dog dogma: an investigation of heterochrony in dogs using 3D geometric morphometric analysis of skull shape.

    Science.gov (United States)

    Drake, Abby Grace

    2011-01-01

    Heterochrony is an evolutionary mechanism that generates diversity via perturbations of the rate or timing of development that requires very little genetic innovation. As such, heterochrony is thought to be a common evolutionary mechanism in the generation of diversity. Previous research has suggested that dogs evolved via heterochrony and are paedomorphic wolves. This study uses three-dimensional landmark-based coordinate data to investigate heterochronic patterns within the skull morphology of the domestic dog. A total of 677 adult dogs representing 106 different breeds were measured and compared with an ontogenetic series of 401 wolves. Geometric morphometric analysis reveals that the cranial shape of none of the modern breeds of dogs resembles the cranial shapes of adult or juvenile wolves. In addition, investigations of regional heterochrony in the face and neurocranium also reject the hypothesis of heterochrony. Throughout wolf cranial development the position of the face and the neurocranium remain in the same plane. Dogs, however, have a de novo cranial flexion in which the palate is tilted dorsally in brachycephalic and mesaticephalic breeds or tilted ventrally in dolichocephalic and down-face breeds. Dogs have evolved very rapidly into an incredibly morphologically diverse species with very little genetic variation. However, the genetic alterations to dog cranial development that have produced this vast range of phylogenetically novel skull shapes do not coincide with the expectations of the heterochronic model. Dogs are not paedomorphic wolves. © 2011 Wiley Periodicals, Inc.

  2. Geometric and morphometric analysis of fish scales to identity genera, species and populations case study: the Cyprinid family

    Directory of Open Access Journals (Sweden)

    Seyedeh Narjes Tabatabei

    2014-01-01

    Full Text Available Using fish scale to identity species and population is a rapid, safe and low cost method. Hence, this study was carried out to investigate the possibility of using geometric and morphometric methods in fish scales for rapid identification of species and populations and compare the efficiency of applying few and/or high number of landmark points. For this purpose, scales of one population of Luciobarbus capito, four populations of Alburnoides eichwaldii and two populations of Rutilus frisii kutum, all belonging to cyprinid family, were examined. On two-dimensional images of the scales 7 and 23 landmark points were digitized in two separate times using TpsDig2, respectively. Landmark data after generalized procrustes analysis were analyzed using Principal Component Analysis (PCA, Canonical Variate Analysis (CVA and Cluster Analysis. The results of both methods (using 7 and 23 landmark points showed significant differences of the shape of scales among the three species studied (P0.05. The results also showed that few number of landmarks could display the differences between scale shapes. According to the results of this study, it could be stated that the scale of each species had unique shape patterns which could be utilized as a species identification key.

  3. The effect of allometric growth on morphometric traits of wolf (Canis lupus using geometric truss

    Directory of Open Access Journals (Sweden)

    Rasoul Khosravi

    2012-12-01

    Full Text Available Iranian wolf is found in different habitats of Iran and possesses different morphological characteristics with respect to its cranium shape based on its distribution. This study was conducted to investigate the allometric growth and geometric changes of cranium in relation to its growth .A total of 35 skulls were collected from different regions and divided into two groups (adult and subadult. Seventeen angles that were drown by joining the measuring points on the whole, neurocranium, and viscerocranium. The correlation between skull index and angle measurements were analyzed in three categories. The decreasing of angles among dorsal face point on the external occipital crest, junction on the median plane of the right and left nasofrontal sutures, the most lateral point of the zygomatic arch and anterior end of the interincisive suture located between the roots of the upper central incisor teeth showed width of the skull increased more than the skull length with age, therefore, skull index increased with age. Results of geometry surveys showed that cranial width did not increase as much compared to the length of neurocranium length. Therefore, the angles of this section increased with age. Also, viscerocranium width increased more than viscerocranium length and the skull became widened with age.

  4. Morphometric Evaluation of Korean Femurs by Geometric Computation: Comparisons of the Sex and the Population

    Directory of Open Access Journals (Sweden)

    Ho-Jung Cho

    2015-01-01

    Full Text Available We measured 28 parameters of 202 femurs from Koreans by an automated geometric computation program using 3D models generated from computed tomography images. The measurement parameters were selected with reference to physical and forensic anthropology studies as well as orthopedic implant design studies. All measurements were calculated using 3D reconstructions on a computer using scientific computation language. We also analyzed sex and population differences by comparison with data from previous studies. Most parameters were larger in males than in females. The height, head diameter, head center offset, and chord length of the diaphysis, most parameters in the distal femur, and the isthmic width of the medullary canal were smaller in Koreans than in other populations. However, the neck-shaft angle, subtense, and width of the intercondylar notch in the distal femur were larger than those in other populations. The results of this study will be useful as a reference for physical and forensic anthropology as well as the design of medical devices suitable for Koreans.

  5. Shape change in the atlas with congenital midline non-union of its posterior arch: a morphometric geometric study.

    Science.gov (United States)

    Ríos, Luis; Palancar, Carlos; Pastor, Francisco; Llidó, Susana; Sanchís-Gimeno, Juan Alberto; Bastir, Markus

    2017-10-01

    The congenital midline non-union of the posterior arch of the atlas is a developmental variant present at a frequency ranging from 0.7% to 3.9%. Most of the reported cases correspond to incidental findings during routine medical examination. In cases of posterior non-union, hypertrophy of the anterior arch and cortical bone thickening of the posterior arches have been observed and interpreted as adaptive responses of the atlas to increased mechanical stress. We sought to determine if the congenital non-union of the posterior arch results in a change in the shape of the atlas. This study is an analysis of the first cervical vertebrae from osteological collections through morphometric geometric techniques. A total of 21 vertebrae were scanned with a high-resolution three-dimensional scanner (Artec Space Spider, Artec Group, Luxembourg). To capture vertebral shape, 19 landmarks and 100 semilandmarks were placed on the vertebrae. Procrustes superimposition was applied to obtain size and shape data (MorphoJ 1.02; Klingenberg, 2011), which were analyzed through principal component analysis (PCA) and mean shape comparisons. The PCA resulted in two components explaining 22.32% and 18.8% of the total shape variance. The graphic plotting of both components indicates a clear shape difference between the control atlas and the atlas with posterior non-union. This observation was supported by statistically significant differences in mean shape comparisons between both types of vertebra (patlas is associated with significant changes in the shape of the vertebra. Copyright © 2017 Elsevier Inc. All rights reserved.

  6. Geometric morphometrics of functionally distinct floral organs in Iris pumila: Analyzing patterns of symmetric and asymmetric shape variations

    Directory of Open Access Journals (Sweden)

    Radović Sanja

    2017-01-01

    Full Text Available The Iris flower is a complex morphological structure composed of two trimerous whorls of functionally distinct petaloid organs (the falls and the standards, one whorl of the stamens and one tricarpellary gynoecium. The petal-like style arms of the carpels are banded over the basal part of the falls, forming three pollination tunnels, each of which is perceived by the Iris pollinators as a single bilaterally symmetrical flower. Apart from the stamens, all petaloid floral organs are preferentially involved in advertising rewards to potential pollinators. Here we used the methods of geometric morphometrics to explore the shape variation in falls, standards and style arms of the Iris pumila flowers and to disentangle the symmetric and the asymmetric component of the total shape variance. Our results show that symmetric variation contributes mostly to the total shape variance in each of the three floral organs. Fluctuating asymmetry (FA was the dominant component of the asymmetric shape variation in the falls and the standards, but appeared to be marginally significant in the style arms. The values of FA indexes for the shape of falls (insects’ landing platforms and for the shape of standards (long-distance reward signals were found to be two orders of magnitude greater compared to that of the style arms. Directional asymmetry appeared to be very low, but highly statistically significant for all analyzed floral organs. Because floral symmetry can reliably indicate the presence of floral rewards, an almost perfect symmetry recorded for the style arm shape might be the outcome of pollinator preferences for symmetrical pollination units. [Project of the Serbian Ministry of Education, Science and Technological Development, Grant no. 173007

  7. Geometric morphometric analysis of allometric variation in the mandibular morphology of the hominids of Atapuerca, Sima de los Huesos site.

    Science.gov (United States)

    Rosas, Antonio; Bastir, Markus

    2004-06-01

    Allometry is an important factor of morphological integration that contributes to the organization of the phenotype and its variation. Variation in the allometric shape of the mandible is particularly important in hominid evolution because the mandible carries important taxonomic traits. Some of these traits are known to covary with size, particularly the retromolar space, symphyseal curvature, and position of the mental foramen. The mandible is a well studied system in the context of the evolutionary development of complex morphological structures because it is composed of different developmental units that are integrated within a single bone. In the present study, we investigated the allometric variation of two important developmental units that are separated by the inferior nerve (a branch of CN V3). We tested the null hypothesis that there would be no difference in allometric variation between the two components. Procrustes-based geometric morphometrics of 20 two-dimensional (2D) landmarks were analyzed by multivariate regressions of shape on size in samples from 121 humans, 48 chimpanzees, and 50 gorillas (all recent specimens), eight fossil hominids from Atapuerca, Sima de los Huesos (AT-SH), and 17 Neandertals. The findings show that in all of the examined species, there was significantly greater allometric variation in the supra-nerve unit than in the infra-nerve unit. The formation of the retromolar space exhibited an allometric relationship with the supra-nerve unit in all of the species studied. The formation of the chin-like morphology is an "apodynamic" feature of the infra-nerve unit in the AT-SH hominids. The results of this study support the hypothesis that allometry contributes to the organization of variation in complex morphological structures. Copyright 2004 Wiley-Liss, Inc.

  8. Investigating population differentiation in a major African agricultural pest: evidence from geometric morphometrics and connectivity suggests high invasion potential.

    Science.gov (United States)

    Karsten, M; Addison, P; Jansen van Vuuren, B; Terblanche, J S

    2016-07-01

    The distribution, spatial pattern and population dynamics of a species can be influenced by differences in the environment across its range. Spatial variation in climatic conditions can cause local populations to undergo disruptive selection and ultimately result in local adaptation. However, local adaptation can be constrained by gene flow and may favour resident individuals over migrants-both are factors critical to the assessment of invasion potential. The Natal fruit fly (Ceratitis rosa) is a major agricultural pest in Africa with a history of island invasions, although its range is largely restricted to south east Africa. Across Africa, C. rosa is genetically structured into two clusters (R1 and R2), with these clusters occurring sympatrically in the north of South Africa. The spatial distribution of these genotypic clusters remains unexamined despite their importance for understanding the pest's invasion potential. Here, C. rosa, sampled from 22 South African locations, were genotyped at 11 polymorphic microsatellite loci and assessed morphologically using geometric morphometric wing shape analyses to investigate patterns of population structure and determine connectedness of pest-occupied sites. Our results show little to no intraspecific (population) differentiation, high population connectivity, high effective population sizes and only one morphological type (R2) within South Africa. The absence of the R1 morphotype at sites where it was previously found may be a consequence of differences in thermal niches of the two morphotypes. Overall, our results suggest high invasion potential of this species, that area-wide pest management should be undertaken on a country-wide scale, and that border control is critical to preventing further invasions. © 2016 John Wiley & Sons Ltd.

  9. Postnatal mandible growth in wild and laboratory mice: Differences revealed from bone remodeling patterns and geometric morphometrics.

    Science.gov (United States)

    Martínez-Vargas, Jessica; Muñoz-Muñoz, Francesc; Martinez-Maza, Cayetana; Molinero, Amalia; Ventura, Jacint

    2017-08-01

    Comparative information on the variation in the temporospatial patterning of mandible growth in wild and laboratory mice during early postnatal ontogeny is scarce but important to understand variation among wild rodent populations. Here, we compare mandible growth between two ontogenetic series from the second to the eighth week of postnatal life, corresponding to two different groups of mice reared under the same conditions: the classical inbred strain C57BL/6J, and Mus musculus domesticus. We characterize the ontogenetic patterns of bone remodeling of the mandibles belonging to these laboratory and wild mice by analyzing bone surface, as well as examine their ontogenetic form changes and bimodular organization using geometric morphometrics. Through ontogeny, the two mouse groups display similar directions of mandible growth, according to the temporospatial distribution of bone remodeling fields. The allometric shape variation of the mandibles of these mice entails the relative enlargement of the ascending ramus. The organization of the mandible into two modules is confirmed in both groups during the last postnatal weeks. However, especially after weaning, the mandibles of wild and laboratory mice differ in the timing and localization of several remodeling fields, in addition to exhibiting different patterns of shape variation and differences in size. The stimulation of dentary bone growth derived from the harder post-weaning diet might account for some features of postnatal mandible growth common to both groups. Nonetheless, a large component of the postnatal growth of the mouse mandible appears to be driven by the inherent genetic programs, which might explain between-group differences. © 2017 Wiley Periodicals, Inc.

  10. Ontogeny of the female femur: geometric morphometric analysis applied on current living individuals of a Spanish population

    Science.gov (United States)

    Pujol, Aniol; Rissech, Carme; Ventura, Jacint; Badosa, Joaquim; Turbón, Daniel

    2014-01-01

    In this study we describe the development of the female femur based on the analysis of high-resolution radiographic images by means of geometric morphometrics, while assessing the usefulness of this method in these kinds of studies. The material analysed consisted of digital images in DICOM format (telemetries), corresponding to 184 left femora in anterior view, obtained from the database of the Hospital Sant Joan de Déu of Barcelona (Spain). Bones analysed corresponded to individuals from 9 to 14 years old. Size and shape variation of the entire femur was quantified by 22 two-dimensional landmarks. Landmark digitisation errors were assessed using Procrustes anova test. Centroid size (CS) variation with age was evaluated by an anova test. Shape variation was assessed by principal component analysis. A mancova test between the first five principal components and age, using the CS as covariable, was applied. Results indicated that both size and shape vary significantly with age. Several age-related shape changes remained significant after removing the allometric effect. In general, an increase in the robustness of the bone and noticeable phenotypic changes in certain areas of the femur were observed. During growth in the proximal region of the femur, the collo-diaphyseal angle decreases, the neck of the femur widens and the fovea moves to a lower position, standing more in line with the plane of the neck. Likewise, the size of the greater and lesser trochanters increase. In the distal region, a significant increase of epiphyseal dimensions was recorded, mainly in the medial condyle. The angular remodelling of the neck and the bicondylar region of the femur in females continues until 13 years old. The information provided in the present study increases our knowledge on the timing and morphology of the femur during development, and in particular the morphology of the different femoral ossification centres during development. PMID:24975495

  11. Estimating the magnitude of morphoscapes: how to measure the morphological component of biodiversity in relation to habitats using geometric morphometrics

    Science.gov (United States)

    Fontaneto, Diego; Panisi, Martina; Mandrioli, Mauro; Montardi, Dario; Pavesi, Maurizio; Cardini, Andrea

    2017-08-01

    Ecological indicators are currently developed to account for the different facets of loss of biological diversity due to direct or indirect effects of human activities. Most ecological indicators include species richness as a metric. Others, such as functional traits and phylogenetic diversity, account for differences in species, even when species richness is the same. Here, we describe and apply a different indicator, called morphoscape dimension, accounting for morphological variability across habitats in a geographical region. We use the case of ground beetles (Coleoptera: Carabidae) in four different habitats in the Po Plain in Northern Italy to exemplify how to quantify the magnitude of the morphological space (i.e. the dimension of the morphoscape) occupied by the species in each habitat using geometric morphometrics. To this aim, we employed a variety of metrics of morphological disparity related to univariate size, and more complex multivariate shape and form. Our `proof of concept' suggests that metrics assessing size and form might largely tend to simply mirror the information provided by species richness, whereas shape morphoscape disparity may be able to account for non-trivial differences in species traits amongst habitats. This is indicated by the woodland morphoscape being on average bigger than that of crops, the most species-rich habitat, despite having almost 20% less species. We conclude suggesting that the analysis of morphoscape dimension has the potential to become a new additional and complimentary tool in the hands of conservation biologists and ecologists to explore and quantify habitat complexity and inform decisions on management and conservation based on a wide set of ecological indicators.

  12. Three-dimensional geometric morphometric analysis of talar morphology in extant gorilla taxa from highland and lowland habitats.

    Science.gov (United States)

    Knigge, Ryan P; Tocheri, Matthew W; Orr, Caley M; Mcnulty, Kieran P

    2015-01-01

    Western gorillas (Gorilla gorilla) are known to climb significantly more often than eastern gorillas (Gorilla beringei), a behavioral distinction attributable to major differences in their respective habitats (i.e., highland vs. lowland). Genetic evidence suggests that the lineages leading to these taxa began diverging from one another between approximately 1 and 3 million years ago. Thus, gorillas offer a special opportunity to examine the degree to which morphology of recently diverged taxa may be "fine-tuned" to differing ecological requirements. Using three-dimensional (3D) geometric morphometrics, we compared talar morphology in a sample of 87 specimens including western (lowland), mountain (highland), and grauer gorillas (lowland and highland populations). Talar shape was captured with a series of landmarks and semilandmarks superimposed by generalized Procrustes analysis. A between-group principal components analysis of overall talar shape separates gorillas by ecological habitat and by taxon. An analysis of only the trochlea and lateral malleolar facet identifies subtle variations in trochlear shape between western lowland and lowland grauer gorillas, potentially indicative of convergent evolution of arboreal adaptations in the talus. Lastly, talar shape scales differently with centroid size for highland and lowland gorillas, suggesting that ankle morphology may track body-size mediated variation in arboreal behaviors differently depending on ecological setting. Several of the observed shape differences are linked biomechanically to the facilitation of climbing in lowland gorillas and to stability and load-bearing on terrestrial substrates in the highland taxa, providing an important comparative model for studying morphological variation in groups known only from fossils (e.g., early hominins). © 2014 Wiley Periodicals, Inc.

  13. Variation and diversity in Homo erectus: a 3D geometric morphometric analysis of the temporal bone.

    Science.gov (United States)

    Terhune, Claire E; Kimbel, William H; Lockwood, Charles A

    2007-07-01

    Although the level of taxonomic diversity within the fossil hominin species Homo erectus (sensu lato) is continually debated, there have been relatively few studies aiming to quantify the morphology of this species. Instead, most researchers have relied on qualitative descriptions or the evaluation of nonmetric characters, which in many cases display continuous variation. Also, only a few studies have used quantitative data to formally test hypotheses regarding the taxonomic composition of the "erectus" hypodigm. Despite these previous analyses, however, and perhaps in part due to these varied approaches for assessing variation within specimens typically referred to H. erectus (sensu lato) and the general lack of rigorous statistical testing of how variation within this taxon is partitioned, there is currently little consensus regarding whether this group is a single species, or whether it should instead be split into separate temporal or geographically delimited taxa. In order to evaluate possible explanations for variation within H. erectus, we tested the general hypothesis that variation within the temporal bone morphology of H. erectus is consistent with that of a single species, using great apes and humans as comparative taxa. Eighteen three-dimensional (3D) landmarks of the temporal bone were digitized on a total of 520 extant and fossil hominid crania. Landmarks were registered by Generalized Procrustes Analysis, and Procrustes distances were calculated for comparisons of individuals within and between the extant taxa. Distances between fossil specimens and between a priori groupings of fossils were then compared to the distances calculated within the extant taxa to assess the variation within the H. erectus sample relative to that of known species, subspecies, and populations. Results of these analyses indicate that shape variation within the entire H. erectus sample is generally higher than extant hominid intraspecific variation, and putative H. ergaster

  14. Procrustes-based geometric morphometrics on MRI images: An example of inter-operator bias in 3D landmarks and its impact on big datasets.

    Science.gov (United States)

    Daboul, Amro; Ivanovska, Tatyana; Bülow, Robin; Biffar, Reiner; Cardini, Andrea

    2018-01-01

    Using 3D anatomical landmarks from adult human head MRIs, we assessed the magnitude of inter-operator differences in Procrustes-based geometric morphometric analyses. An in depth analysis of both absolute and relative error was performed in a subsample of individuals with replicated digitization by three different operators. The effect of inter-operator differences was also explored in a large sample of more than 900 individuals. Although absolute error was not unusual for MRI measurements, including bone landmarks, shape was particularly affected by differences among operators, with up to more than 30% of sample variation accounted for by this type of error. The magnitude of the bias was such that it dominated the main pattern of bone and total (all landmarks included) shape variation, largely surpassing the effect of sex differences between hundreds of men and women. In contrast, however, we found higher reproducibility in soft-tissue nasal landmarks, despite relatively larger errors in estimates of nasal size. Our study exemplifies the assessment of measurement error using geometric morphometrics on landmarks from MRIs and stresses the importance of relating it to total sample variance within the specific methodological framework being used. In summary, precise landmarks may not necessarily imply negligible errors, especially in shape data; indeed, size and shape may be differentially impacted by measurement error and different types of landmarks may have relatively larger or smaller errors. Importantly, and consistently with other recent studies using geometric morphometrics on digital images (which, however, were not specific to MRI data), this study showed that inter-operator biases can be a major source of error in the analysis of large samples, as those that are becoming increasingly common in the 'era of big data'.

  15. The application of traditional and geometric morphometric analyses for forensic quantification of sexual dimorphism: preliminary investigations in a Western Australian population.

    Science.gov (United States)

    Franklin, Daniel; Cardini, Andrea; Flavel, Ambika; Kuliukas, Algis

    2012-07-01

    A current limitation of forensic practice in Western Australia is a lack of contemporary population-specific standards for biological profiling; this directly relates to the unavailability of documented human skeletal collections. With rapidly advancing technology, however, it is now possible to acquire accurate skeletal measurements from 3D scans contained in medical databases. The purpose of the present study, therefore, is to explore the accuracy of using cranial form to predict sex in adult Australians. Both traditional and geometric morphometric methods are applied to data derived from 3D landmarks acquired in CT-reconstructed crania. The sample comprises multi-detector computed tomography scans of 200 adult individuals; following 3D volume rendering, 46 anatomical landmarks are acquired using OsiriX (version 3.9). Centroid size and shape (first 20 PCs of the Procrustes coordinates) and the inter-landmark (ILD) distances between all possible pairs of landmarks are then calculated. Sex classification effectiveness of the 3D multivariate descriptors of size and shape and selected ILD measurements are assessed and compared; robustness of findings is explored using resampling statistics. Cranial shape and size and the ILD measurements are sexually dimorphic and explain 3.2 to 54.3 % of sample variance; sex classification accuracy is 83.5-88.0 %. Sex estimation using 3D shape appears to have some advantages compared to approaches using size measurements. We have, however, identified a simple and biologically meaningful single non-traditional linear measurement (glabella-zygion) that classifies Western Australian individuals according to sex with a high degree of expected accuracy (87.5-88 %).

  16. 2D or Not 2D? Testing the Utility of 2D Vs. 3D Landmark Data in Geometric Morphometrics of the Sculpin Subfamily Oligocottinae (Pisces; Cottoidea).

    Science.gov (United States)

    Buser, Thaddaeus J; Sidlauskas, Brian L; Summers, Adam P

    2018-05-01

    We contrast 2D vs. 3D landmark-based geometric morphometrics in the fish subfamily Oligocottinae by using 3D landmarks from CT-generated models and comparing the morphospace of the 3D landmarks to one based on 2D landmarks from images. The 2D and 3D shape variables capture common patterns across taxa, such that the pairwise Procrustes distances among taxa correspond and the trends captured by principal component analysis are similar in the xy plane. We use the two sets of landmarks to test several ecomorphological hypotheses from the literature. Both 2D and 3D data reject the hypothesis that head shape correlates significantly with the depth at which a species is commonly found. However, in taxa where shape variation in the z-axis is high, the 2D shape variables show sufficiently strong distortion to influence the outcome of the hypothesis tests regarding the relationship between mouth size and feeding ecology. Only the 3D data support previous studies which showed that large mouth sizes correlate positively with high percentages of elusive prey in the diet. When used to test for morphological divergence, 3D data show no evidence of divergence, while 2D data show that one clade of oligocottines has diverged from all others. This clade shows the greatest degree of z-axis body depth within Oligocottinae, and we conclude that the inability of the 2D approach to capture this lateral body depth causes the incongruence between 2D and 3D analyses. Anat Rec, 301:806-818, 2018. © 2017 Wiley Periodicals, Inc. © 2017 Wiley Periodicals, Inc.

  17. A Geometrical Approach to Bell's Theorem

    Science.gov (United States)

    Rubincam, David Parry

    2000-01-01

    Bell's theorem can be proved through simple geometrical reasoning, without the need for the Psi function, probability distributions, or calculus. The proof is based on N. David Mermin's explication of the Einstein-Podolsky-Rosen-Bohm experiment, which involves Stern-Gerlach detectors which flash red or green lights when detecting spin-up or spin-down. The statistics of local hidden variable theories for this experiment can be arranged in colored strips from which simple inequalities can be deduced. These inequalities lead to a demonstration of Bell's theorem. Moreover, all local hidden variable theories can be graphed in such a way as to enclose their statistics in a pyramid, with the quantum-mechanical result lying a finite distance beneath the base of the pyramid.

  18. Geometric morphometric analysis of cyclical body shape changes in color pattern variants of Cichla temensis Humboldt, 1821 (Perciformes: Cichlidae demonstrates reproductive energy allocation

    Directory of Open Access Journals (Sweden)

    Paul Reiss

    Full Text Available Previously recognized color and pattern variants of adult Cichla temensis in Amazon flood pulse river environments reflect the cycling of individuals through seasonal sexual maturity and spawning. Individuals also vary in shape from blocky to fusiform. To determine if shape differences are related to patterns of fat reserve deposition and utilization, and to quantify the relationship of shape with color and pattern variation and life history status, specimens in each of four previously defined grades of color and pattern variation were compared using geometric morphometric techniques. Progressive shape changes occurred between grades independent of sex and correlated to gonosomatic index (GSI. Thin plate spline deformation visualizations indicate that the observed shape differences are related to fat deposition patterns. The seasonal timing of shape change and its link to color pattern variation, sexual maturity and local water level conditions suggests a relationship between the physiological and behavioral characteristics of C. temensis and the cyclical flood pulse pattern of its habitat.

  19. Quantum renormalization group approach to geometric phases in spin chains

    International Nuclear Information System (INIS)

    Jafari, R.

    2013-01-01

    A relation between geometric phases and criticality of spin chains are studied using the quantum renormalization-group approach. I have shown how the geometric phase evolve as the size of the system becomes large, i.e., the finite size scaling is obtained. The renormalization scheme demonstrates how the first derivative of the geometric phase with respect to the field strength diverges at the critical point and maximum value of the first derivative, and its position, scales with the exponent of the system size

  20. Quantum trajectory approach to the geometric phase: open bipartite systems

    International Nuclear Information System (INIS)

    Yi, X X; Liu, D P; Wang, W

    2005-01-01

    Through the quantum trajectory approach, we calculate the geometric phase acquired by a bipartite system subjected to decoherence. The subsystems that compose the bipartite system interact with each other and then are entangled in the evolution. The geometric phase due to the quantum jump for both the bipartite system and its subsystems is calculated and analysed. As an example, we present two coupled spin-1/2 particles to detail the calculations

  1. Computer vision approach to morphometric feature analysis of basal cell nuclei for evaluating malignant potentiality of oral submucous fibrosis.

    Science.gov (United States)

    Muthu Rama Krishnan, M; Pal, Mousumi; Paul, Ranjan Rashmi; Chakraborty, Chandan; Chatterjee, Jyotirmoy; Ray, Ajoy K

    2012-06-01

    This research work presents a quantitative approach for analysis of histomorphometric features of the basal cell nuclei in respect to their size, shape and intensity of staining, from surface epithelium of Oral Submucous Fibrosis showing dysplasia (OSFD) to that of the Normal Oral Mucosa (NOM). For all biological activity, the basal cells of the surface epithelium form the proliferative compartment and therefore their morphometric changes will spell the intricate biological behavior pertaining to normal cellular functions as well as in premalignant and malignant status. In view of this, the changes in shape, size and intensity of staining of the nuclei in the basal cell layer of the NOM and OSFD have been studied. Geometric, Zernike moments and Fourier descriptor (FD) based as well as intensity based features are extracted for histomorphometric pattern analysis of the nuclei. All these features are statistically analyzed along with 3D visualization in order to discriminate the groups. Results showed increase in the dimensions (area and perimeter), shape parameters and decreasing mean nuclei intensity of the nuclei in OSFD in respect to NOM. Further, the selected features are fed to the Bayesian classifier to discriminate normal and OSFD. The morphometric and intensity features provide a good sensitivity of 100%, specificity of 98.53% and positive predicative accuracy of 97.35%. This comparative quantitative characterization of basal cell nuclei will be of immense help for oral onco-pathologists, researchers and clinicians to assess the biological behavior of OSFD, specially relating to their premalignant and malignant potentiality. As a future direction more extensive study involving more number of disease subjects is observed.

  2. A Differential Geometric Approach to Nonlinear Filtering: The Projection Filter

    NARCIS (Netherlands)

    Brigo, D.; Hanzon, B.; LeGland, F.

    1998-01-01

    This paper presents a new and systematic method of approximating exact nonlinear filters with finite dimensional filters, using the differential geometric approach to statistics. The projection filter is defined rigorously in the case of exponential families. A convenient exponential family is

  3. A geometrical approach to free-field quantization

    International Nuclear Information System (INIS)

    Tabensky, R.; Valle, J.W.F.

    1977-01-01

    A geometrical approach to the quantization of free relativistic fields is given. Complex probability amplitudes are assigned to the solutions of the classical evolution equation. It is assumed that the evolution is stricly classical, according to the scalar unitary representation of the Poincare group in a functional space. The theory is equivalent to canonical quantization [pt

  4. The algebraic versus geometric approach to quantum field theory

    International Nuclear Information System (INIS)

    Schroer, B.

    1990-06-01

    Some recent developments in algebraic QFT are reviewed and confronted with results obtained by geometric methods. In particular a critical evaluation of the present status of the quantum symmetry discussion is given and the possible relation of the (Gepner-Witten) modularity in conformal QFT 2 and the Tomita modularity (existence of quantum reflections) of the algebraic approach is commented on. (author) 34 refs

  5. Evidence of at least two evolutionary lineages in Melipona subnitida (Apidae, Meliponini) suggested by mtDNA variability and geometric morphometrics of forewings

    Science.gov (United States)

    Bonatti, Vanessa; Simões, Zilá Luz Paulino; Franco, Fernando Faria; Francoy, Tiago Mauricio

    2014-01-01

    Melipona subnitida, a tropical stingless bee, is an endemic species of the Brazilian northeast and exhibits great potential for honey and pollen production in addition to its role as one of the main pollinators of the Caatinga biome. To understand the genetic structure and better assist in the conservation of this species, we characterized the population variability of M. subnitida using geometric morphometrics of the forewing and cytochrome c oxidase I gene fragment sequencing. We collected workers from six localities in the northernmost distribution. Both methodologies indicated that the variability among the sampled populations is related both to the environment in which samples were collected and the geographical distance between the sampling sites, indicating that differentiation among the populations is due to the existence of at least evolutionary lineages. Molecular clock data suggest that this differentiation may have begun in the middle Pleistocene, approximately 396 kya. The conservation of all evolutionary lineages is important since they can present differential resistance to environmental changes, as resistance to drought and diseases.

  6. Ontogenetic scaling of caudal fin shape in Squalus acanthias (Chondrichthyes, Elasmobranchii): a geometric morphometric analysis with implications for caudal fin functional morphology.

    Science.gov (United States)

    Reiss, Katie L; Bonnan, Matthew F

    2010-07-01

    The shark heterocercal caudal fin and its contribution to locomotion are of interest to biologists and paleontologists. Current hydrodynamic data show that the stiff dorsal lobe leads the ventral lobe, both lobes of the tail are synchronized during propulsion, and tail shape reflects its overall locomotor function. Given the difficulties surrounding the analysis of shark caudal fins in vivo, little is known about changes in tail shape related to ontogeny and sex in sharks. A quantifiable analysis of caudal fin shape may provide an acceptable proxy for inferring gross functional morphology where direct testing is difficult or impossible. We examined ontogenetic and sex-related shape changes in the caudal fins of 115 Squalus acanthias museum specimens, to test the hypothesis that significant shape changes in the caudal fin shape occur with increasing size and between the sexes. Using linear and geometric morphometrics, we examined caudal shape changes within the context of current hydrodynamic models. We found no statistically significant linear or shape difference between sexes, and near-isometric scaling trends for caudal dimensions. These results suggest that lift and thrust increase linearly with size and caudal span. Thin-plate splines results showed a significant allometric shape change associated with size and caudal span: the dorsal lobe elongates and narrows, whereas the ventral lobe broadens and expands ventrally. Our data suggest a combination of caudal fin morphology with other body morphology aspects, would refine, and better elucidate the hydrodynamic factors (if any) that underlie the significant shape changes we report here for S. acanthias.

  7. Application of geometric morphometrics to the study of postnatal size and shape changes in the skull of Calomys expulsus

    Directory of Open Access Journals (Sweden)

    Erika Hingst-Zaher

    2000-06-01

    Full Text Available Abstract We analyzed ontogenetic patterns of landmarks for 169 laboratory-raised specimens of Calomys expulsus, at 0, 5, 10, 20, 30, 50, 100, 200, and 300 days of age, using two-dimensional geometric morphometrics. There is sexual dimorphism in size, with males smaller than females at earlier ages, but larger after 50 days. Differences in shape between sexes are strong only until 10 days of age, suggesting that shape is more constrained than size. Combining sexes, there is strong variation in size with age, reduced after 200 days, while most of the variation in shape occurs before 20 days. This dissociation is common for sigmodontine rodents, and might be the basis of heterochronic processes responsible for the morphological variation of this South American group. Centroid size does not show any reduction in the coefficient of variation over ages, while Procrustes distances within sucessive ages are reduced after 20 days. Uniform component and the more global partial warps explain most of the shape changes with age. Cranial and Facial parts of the skull increase in size at different rates with a relative lengthening of the snout and decrease in height of the braincase. We were unable to detect a clear pattern of integration for the rostrum and braincase, besides that shown by landmark displacements.

  8. Light scattering in porous materials: Geometrical optics and stereological approach

    International Nuclear Information System (INIS)

    Malinka, Aleksey V.

    2014-01-01

    Porous material has been considered from the point of view of stereology (geometrical statistics), as a two-phase random mixture of solid material and air. Considered are the materials having the refractive index with the real part that differs notably from unit and the imaginary part much less than unit. Light scattering in such materials has been described using geometrical optics. These two – the geometrical optics laws and the stereological approach – allow one to obtain the inherent optical properties of such a porous material, which are basic in the radiative transfer theory: the photon survival probability, the scattering phase function, and the polarization properties (Mueller matrix). In this work these characteristics are expressed through the refractive index of the material and the random chord length distribution. The obtained results are compared with the traditional approach, modeling the porous material as a pack of particles of different shapes. - Highlights: • Porous material has been considered from the point of view of stereology. • Properties of a two-phase random mixture of solid material and air are considered. • Light scattering in such materials has been described using geometrical optics. • The inherent optical properties of such a porous material have been obtained

  9. On the geometrical approach to the relativistic string theory

    International Nuclear Information System (INIS)

    Barbashov, B.M.; Nesterenko, V.V.

    1978-01-01

    In a geometrical approach to the string theory in the four-dimensional Minkowski space the relativistic invariant gauge proposed earlier for the string moving in three-dimensional space-time is used. In contrast to the results of previous paper the system of equations for the coefficients of the fundamental forms of the string model world sheet can be reduced now to one nonlinear Lionville equation again but for a complex valued function u. It is shown that in the case of space-time with arbitrary dimension there are such string motions which are described by one non-linear equation with a real function u. And as a consequence the soliton solutions investigated earlier take place in a geometrical approach to the string theory in any dimensional space-time

  10. Geometrical approach to central molecular chirality: a chirality selection rule

    OpenAIRE

    Capozziello, S.; Lattanzi, A.

    2004-01-01

    Chirality is of primary importance in many areas of chemistry and has been extensively investigated since its discovery. We introduce here the description of central chirality for tetrahedral molecules using a geometrical approach based on complex numbers. According to this representation, for a molecule having n chiral centres, it is possible to define an index of chirality. Consequently a chirality selection rule has been derived which allows the characterization of a molecule as achiral, e...

  11. A geometric morphometrics comparative analysis of Neandertal humeri (epiphyses-fused) from the El Sidrón cave site (Asturias, Spain).

    Science.gov (United States)

    Rosas, Antonio; Pérez-Criado, Laura; Bastir, Markus; Estalrrich, Almudena; Huguet, Rosa; García-Tabernero, Antonio; Pastor, Juan Francisco; de la Rasilla, Marco

    2015-05-01

    A new collection of 49,000 year old Neandertal fossil humeri from the El Sidrón cave site (Asturias, Spain) is presented. A total of 49 humeral remains were recovered, representing 10 left and 8 right humeri from adults, adolescents, and a juvenile (not included in the analyses). 3D geometric morphometric (GM) methods as well as classic anthropological variables were employed to conduct a broad comparative analysis by means of mean centroid size and shape comparisons, principal components analysis, and cluster studies. Due to the fragmentary nature of the fossils, comparisons were organized in independent analyses according to different humeral portions: distal epiphysis, diaphysis, proximal epiphysis, and the complete humerus. From a multivariate viewpoint, 3D-GM analyses revealed major differences among taxonomic groups, supporting the value of the humerus in systematic classification. Notably, the Australopithecus anamensis (KP-271) and Homo ergaster Nariokotome (KNM-WT 15000) distal humerus consistently clusters close to those of modern humans, which may imply a primitive condition for Homo sapiens morphology. Australopithecus specimens show a high degree of dispersion in the morphospace. The El Sidrón sample perfectly fits into the classic Neandertal pattern, previously described as having a relatively wide olecranon fossa, as well as thin lateral and medial distodorsal pillars. These characteristics were also typical of the Sima de los Huesos (Atapuerca) sample, African mid-Pleistocene Bodo specimen, and Lower Pleistocene TD6-Atapuerca remains and may be considered as a derived state. Finally, we hypothesize that most of the features thought to be different between Neandertals and modern humans might be associated with structural differences in the pectoral girdle and shoulder joint. Copyright © 2015 Elsevier Ltd. All rights reserved.

  12. Geometric morphometric analysis of intratrackway variability: a case study on theropod and ornithopod dinosaur trackways from Münchehagen (Lower Cretaceous, Germany

    Directory of Open Access Journals (Sweden)

    Jens N. Lallensack

    2016-06-01

    the ornithopod trackways. Geometric morphometric analysis reveals potential for improvement of existing discriminant methods.

  13. Geometric morphometric analysis of intratrackway variability: a case study on theropod and ornithopod dinosaur trackways from Münchehagen (Lower Cretaceous, Germany).

    Science.gov (United States)

    Lallensack, Jens N; van Heteren, Anneke H; Wings, Oliver

    2016-01-01

    trackways. Geometric morphometric analysis reveals potential for improvement of existing discriminant methods.

  14. Sex determination by three-dimensional geometric morphometrics of the vault and midsagittal curve of the neurocranium in a modern Greek population sample.

    Science.gov (United States)

    Chovalopoulou, Maria-Eleni; Valakos, Efstratios D; Manolis, Sotiris K

    2016-06-01

    The aim of this study is to assess sexual dimorphism of adult crania in the vault and midsagittal curve of the vault using three-dimensional geometric morphometric methods. The study sample consisted of 176 crania of known sex (94 males, 82 females) belonging to individuals who lived during the 20th century in Greece. The three-dimensional co-ordinates of 31 ecto-cranial landmarks and 30 semi-landmarks were digitized using a MicroScribe 3DX contact digitizer. Generalized Procrustes analysis (GPA) was used to obtain size and shape variables for statistical analysis. Shape, size and form analyses were carried out by logistic regression and three discriminant function analyses. Results indicate that there are shape differences between sexes. Females in the region of the parietal bones are narrower and the axis forming the frontal and occipital bones is more elongated; the frontal bone is more vertical. Sex-specific shape differences give better classification results in the vault (79%) compared with the midsagittal curve of the neurocranium (68.8%). Size alone yielded better results for cranial vault (82%), while for the midsagittal curve of the vault the result is poorer (68.1%). As anticipated, the classification accuracy improves when both size and shape are combined (89.2% for vault, and 79.4% for midsagittal curve of the vault). These latter findings imply that, in contrast to the midsagittal curve of the neurocranium, the shape of the cranial vault can be used as an indicator of sex in the modern Greek population. Copyright © 2016. Published by Elsevier GmbH.

  15. Palatal growth in complete unilateral cleft lip and palate patients following neonatal cheiloplasty: Classic and geometric morphometric assessment.

    Science.gov (United States)

    Hoffmannova, Eva; Bejdová, Šárka; Borský, Jiri; Dupej, Ján; Cagáňová, Veronika; Velemínská, Jana

    2016-11-01

    A new method of early neonatal cheiloplasty has recently been employed on patients having complete unilateral cleft lip and palate (cUCLP). We aimed to investigate (1) their detailed palatal morphology before surgery and growth during the 10 months after neonatal cheiloplasty, (2) the growth of eight dimensions of the maxilla in these patients, (3) the development of these dimensions compared with published data on noncleft controls and on cUCLP patients operated using later operation protocol (LOP; 6 months of age). Sixty-six virtual dental models of 33 longitudinally evaluated cUCLP patients were analysed using metric analysis, a dense correspondence model, and multivariate statistics. We compared the palatal surfaces before neonatal cheiloplasty (mean age, 4 days) and before palatoplasty (mean age, 10 months). The palatal form variability of 10-month-old children was considerably reduced during the observed period thanks to their undisturbed growth, that is, the palate underwent the same growth changes following neonatal cheiloplasty. A detailed colour-coded map identified the most marked growth at the anterior and posterior ends of both segments. The maxilla of cUCLP patients after neonatal cheiloplasty had a growth tendency similar to noncleft controls (unlike LOP). Both methodological approaches showed that early neonatal cheiloplasty in cUCLP patients did not prevent forward growth of the upper jaw segments and did not reduce either the length or width of the maxilla during the first 10 months of life. Copyright © 2016 Elsevier Ireland Ltd. All rights reserved.

  16. Phenotypic differentiation of the Red Sea gastropods in response to the environmental deterioration: Geometric morphometric approach

    Science.gov (United States)

    Abdelhady, Ahmed Awad

    2016-03-01

    The negative impacts of degradation in the coastal zone of the Red Sea are becoming well known in upper portions of the trophic web (e.g., humans and fish), but are less well known among the benthic primary consumers. In addition, the degree to which heavy metals are entering the trophic web can be better-quantified using macrobenthos. Two-gastropod genera encompassing Echinolittorina subnodosa and Planaxis sulcatus from three different localities on the Egyptian coast of the Red Sea were examined in order to deduce the impact of environmental deterioration on the morphology of shells. The examined sites include clean pristine, slightly polluted, and markedly polluted rocky shores. Phosphate/lead industry is the main source of pollution in this zone. Because landmarks on the rugose Echinolittorina are difficult to define and to ensure finer resolution of the analyses, a newly 'grid-based' landmarks was implemented. Both Canonical Variate Analysis (CVA) and Thin Plate Spline (TPS) were particularly capable to capture and terrace the minor morphological variations accurately. Two phenotypes portioned among the environmentally different populations were recognized and interpreted as ecotypes with many intermediate forms. The first ecotype has a higher spire and smaller aperture and dominating the pristine site North of Marsa Alam, whereas the second ecotype has a globular shell shape with big aperture and dominating the markedly polluted site. The intermediate forms dominating the slightly polluted site. The shape differences are interpreted as an adaptive differentiation to different metal concentrations. As the morphological variation between the two-ecotypes of both taxa is still minors, and both ecotypes occur together with many intermediate forms, the phenotypic divergence stage has not yet accomplished. The gradational shape change among the investigated populations was positively correlated with index of Pollution (IP). As the human activities were the main driver of the phenotypic changes, hence anthropogenic impact may shift the evolution and/or the extinction rates.

  17. Morphometrics applied to medical entomology.

    Science.gov (United States)

    Dujardin, Jean-Pierre

    2008-12-01

    Morphometrics underwent a revolution more than one decade ago. In the modern morphometrics, the estimate of size is now contained in a single variable reflecting variation in many directions, as many as there are landmarks under study, and shape is defined as their relative positions after correcting for size, position and orientation. With these informative data, and the corresponding software freely available to conduct complex analyses, significant biological and epidemiological features can be quantified more accurately. We discuss the evolutionary significance of the environmental impact on metric variability, mentioning the importance of concepts like genetic assimilation, genetic accommodation, and epigenetics. We provide examples of measuring the effect of selection on metric variation by comparing (unpublished) Qst values with corresponding (published) Fst. The primary needs of medical entomologists are to distinguish species, especially cryptic species, and to detect them where they are not expected. We explain how geometric morphometrics could apply to these questions, and where there are deficiencies preventing the approach from being utilized at its maximum potential. Medical entomologists in connection with control programs aim to identify isolated populations where the risk of reinfestation after treatment would be low ("biogeographical islands"). Identifying them can be obtained from estimating the number of migrants per generation. Direct assessment of movement remains the most valid approach, but it scores active movement only. Genetic methods estimating gene flow levels among interbreeding populations are commonly used, but gene flow does not necessarily mean the current flow of migrants. Methods using the morphometric variation are neither suited to evaluate gene flow, nor are they adapted to estimate the flow of migrants. They may provide, however, the information needed to create a preliminary map pointing to relevant areas where one could

  18. Geometric allocation approaches in Markov chain Monte Carlo

    International Nuclear Information System (INIS)

    Todo, S; Suwa, H

    2013-01-01

    The Markov chain Monte Carlo method is a versatile tool in statistical physics to evaluate multi-dimensional integrals numerically. For the method to work effectively, we must consider the following key issues: the choice of ensemble, the selection of candidate states, the optimization of transition kernel, algorithm for choosing a configuration according to the transition probabilities. We show that the unconventional approaches based on the geometric allocation of probabilities or weights can improve the dynamics and scaling of the Monte Carlo simulation in several aspects. Particularly, the approach using the irreversible kernel can reduce or sometimes completely eliminate the rejection of trial move in the Markov chain. We also discuss how the space-time interchange technique together with Walker's method of aliases can reduce the computational time especially for the case where the number of candidates is large, such as models with long-range interactions

  19. Geometric Approaches to Quadratic Equations from Other Times and Places.

    Science.gov (United States)

    Allaire, Patricia R.; Bradley, Robert E.

    2001-01-01

    Focuses on geometric solutions of quadratic problems. Presents a collection of geometric techniques from ancient Babylonia, classical Greece, medieval Arabia, and early modern Europe to enhance the quadratic equation portion of an algebra course. (KHR)

  20. Geometrical approach to the dynamics of the relativistic string

    International Nuclear Information System (INIS)

    Barbashov, B.M.; Koshkarov, A.L.

    1979-01-01

    The dynamics of the relativistic string is considered from the point of view of the gaussian theory of two-dimensional surfaces in the three-dimensional pseudoeuclidean space-epsilon 3 1 according to which the surface is characterized by its first and second quadratic forms. The geometrical approach possesses an advantage which gives the possibility to solve manifestly additional conditions on the vector describing the coordinates of the string world surface. The equations of motion and boundary conditions are written out for the cases of a string with massive ends and a closed string. The basic equations are formulated for the coefficients of the first and second quadratic forms of the string world surface, which represent the known geometric conditions of integration of Gauss and Weingarten derivation formulas. By means of integration of the derivation formulas the representation is obtained for the form of the string world surface in a certain basis, which satisfies the equations of motion as well as additional conditions. A new relativistic invariant gauge is suggested which fixes the second quadratic form of the surface. This representation can be extended to the case of arbitrary dimensional space

  1. Lorentz Invariance Violation effects on UHECR propagation: A geometrized approach

    Science.gov (United States)

    Torri, Marco Danilo Claudio; Bertini, Stefano; Giammarchi, Marco; Miramonti, Lino

    2018-06-01

    We explore the possibility to geometrize the interaction of massive fermions with the quantum structure of space-time, trying to create a theoretical background, in order to explain what some recent experimental results seem to implicate on the propagation of Ultra High Energy Cosmic Rays (UHECR). We will investigate part of the phenomenological implications of this approach on the predicted effect of the UHECR suppression, in fact recent evidences seem to involve the modification of the GZK cut-off phenomenon. The search for an effective theory, which can explain this physical effect, is based on Lorentz Invariance Violation (LIV), which is introduced via Modified Dispersion Relations (MDRs). Furthermore we illustrate that this perspective implies a more general geometry of space-time than the usual Riemannian one, indicating, for example, the opportunity to resort to Finsler theory.

  2. Macroscopic polarization in crystalline dielectrics: the geometric phase approach

    International Nuclear Information System (INIS)

    Resta, R.

    1994-01-01

    The macroscopic electric polarization of a crystal is often defined as the dipole of a unit cell. In fact, such a dipole moment is ill defined, and the above definition is incorrect. Looking more closely, the quantity generally measured is differential polarization, defined with respect to a ''reference state'' of the same material. Such differential polarizations include either derivatives of the polarization (dielectric permittivity, Born effective charges, piezoelectricity, pyroelectricity) or finite differences (ferroelectricity). On the theoretical side, the differential concept is basic as well. Owing to continuity, a polarization difference is equivalent to a macroscopic current, which is directly accessible to the theory as a bulk property. Polarization is a quantum phenomenon and cannot be treated with a classical model, particularly whenever delocalized valence electrons are present in the dielectric. In a quantum picture, the current is basically a property of the phase of the wave functions, as opposed to the charge, which is a property of their modulus. An elegant and complete theory has recently been developed by King-Smith and Vanderbilt, in which the polarization difference between any two crystal states--in a null electric field--takes the form of a geometric quantum phase. This gives a comprehensive account of this theory, which is relevant for dealing with transverse-optic phonons, piezoelectricity, and ferroelectricity. Its relation to the established concepts of linear-response theory is also discussed. Within the geometric phase approach, the relevant polarization difference occurs as the circuit integral of a Berry connection (or ''vector potential''), while the corresponding curvature (or ''magnetic field'') provides the macroscopic linear response

  3. Entanglement capacity of nonlocal Hamiltonians: A geometric approach

    International Nuclear Information System (INIS)

    Lari, Behzad; Hassan, Ali Saif M.; Joag, Pramod S.

    2009-01-01

    We develop a geometric approach to quantify the capability of creating entanglement for a general physical interaction acting on two qubits. We use the entanglement measure proposed by us for N-qubit pure states [Ali Saif M. Hassan and Pramod S. Joag, Phys. Rev. A 77, 062334 (2008)]. This geometric method has the distinct advantage that it gives the experimentally implementable criteria to ensure the optimal entanglement production rate without requiring a detailed knowledge of the state of the two qubit system. For the production of entanglement in practice, we need criteria for optimal entanglement production, which can be checked in situ without any need to know the state, as experimentally finding out the state of a quantum system is generally a formidable task. Further, we use our method to quantify the entanglement capacity in higher level and multipartite systems. We quantify the entanglement capacity for two qutrits and find the maximal entanglement generation rate and the corresponding state for the general isotropic interaction between qutrits, using the entanglement measure of N-qudit pure states proposed by us [Ali Saif M. Hassan and Pramod S. Joag, Phys. Rev. A 80, 042302 (2009)]. Next we quantify the genuine three qubit entanglement capacity for a general interaction between qubits. We obtain the maximum entanglement generation rate and the corresponding three qubit state for a general isotropic interaction between qubits. The state maximizing the entanglement generation rate is of the Greenberger-Horne-Zeilinger class. To the best of our knowledge, the entanglement capacities for two qutrit and three qubit systems have not been reported earlier.

  4. A new approach toward geometrical concept of black hole thermodynamics

    Energy Technology Data Exchange (ETDEWEB)

    Hendi, Seyed Hossein [Shiraz University, Physics Department and Biruni Observatory, College of Sciences, Shiraz (Iran, Islamic Republic of); Research Institute for Astronomy and Astrophysics of Maragha (RIAAM), Maragha (Iran, Islamic Republic of); Panahiyan, Shahram; Panah, Behzad Eslam; Momennia, Mehrab [Shiraz University, Physics Department and Biruni Observatory, College of Sciences, Shiraz (Iran, Islamic Republic of)

    2015-10-15

    Motivated by the energy representation of Riemannian metric, in this paper we study different approaches toward the geometrical concept of black hole thermodynamics. We investigate thermodynamical Ricci scalar of Weinhold, Ruppeiner and Quevedo metrics and show that their number and location of divergences do not coincide with phase transition points arisen from heat capacity. Next, we introduce a new metric to solve these problems. We show that the denominator of the Ricci scalar of the new metric contains terms which coincide with different types of phase transitions. We elaborate the effectiveness of the new metric and shortcomings of the previous metrics with some examples. Furthermore, we find a characteristic behavior of the new thermodynamical Ricci scalar which enables one to distinguish two types of phase transitions. In addition, we generalize the new metric for the cases of more than two extensive parameters and show that in these cases the divergencies of thermodynamical Ricci scalar coincide with phase transition points of the heat capacity. (orig.)

  5. A new approach toward geometrical concept of black hole thermodynamics

    International Nuclear Information System (INIS)

    Hendi, Seyed Hossein; Panahiyan, Shahram; Panah, Behzad Eslam; Momennia, Mehrab

    2015-01-01

    Motivated by the energy representation of Riemannian metric, in this paper we study different approaches toward the geometrical concept of black hole thermodynamics. We investigate thermodynamical Ricci scalar of Weinhold, Ruppeiner and Quevedo metrics and show that their number and location of divergences do not coincide with phase transition points arisen from heat capacity. Next, we introduce a new metric to solve these problems. We show that the denominator of the Ricci scalar of the new metric contains terms which coincide with different types of phase transitions. We elaborate the effectiveness of the new metric and shortcomings of the previous metrics with some examples. Furthermore, we find a characteristic behavior of the new thermodynamical Ricci scalar which enables one to distinguish two types of phase transitions. In addition, we generalize the new metric for the cases of more than two extensive parameters and show that in these cases the divergencies of thermodynamical Ricci scalar coincide with phase transition points of the heat capacity. (orig.)

  6. Implementation and efficiency of two geometric stiffening approaches

    International Nuclear Information System (INIS)

    Lugris, Urbano; Naya, Miguel A.; Perez, Jose A.; Cuadrado, Javier

    2008-01-01

    When the modeling of flexible bodies is required in multibody systems, the floating frame of reference formulations are probably the most efficient methods available. In the case of beams undergoing high speed rotations, the geometric stiffening effect can appear due to geometric nonlinearities, and it is often not captured by the aforementioned methods, since it is common to linearize the elastic forces assuming small deformations. The present work discusses the implementation of different existing methods developed to consider such geometric nonlinearities within a floating frame of reference formulation in natural coordinates, making emphasis on the relation between efficiency and accuracy of the resulting algorithms, seeking to provide practical criteria of use

  7. An information geometric approach to least squares minimization

    Science.gov (United States)

    Transtrum, Mark; Machta, Benjamin; Sethna, James

    2009-03-01

    Parameter estimation by nonlinear least squares minimization is a ubiquitous problem that has an elegant geometric interpretation: all possible parameter values induce a manifold embedded within the space of data. The minimization problem is then to find the point on the manifold closest to the origin. The standard algorithm for minimizing sums of squares, the Levenberg-Marquardt algorithm, also has geometric meaning. When the standard algorithm fails to efficiently find accurate fits to the data, geometric considerations suggest improvements. Problems involving large numbers of parameters, such as often arise in biological contexts, are notoriously difficult. We suggest an algorithm based on geodesic motion that may offer improvements over the standard algorithm for a certain class of problems.

  8. Geometric Programming Approach to an Interactive Fuzzy Inventory Problem

    Directory of Open Access Journals (Sweden)

    Nirmal Kumar Mandal

    2011-01-01

    Full Text Available An interactive multiobjective fuzzy inventory problem with two resource constraints is presented in this paper. The cost parameters and index parameters, the storage space, the budgetary cost, and the objective and constraint goals are imprecise in nature. These parameters and objective goals are quantified by linear/nonlinear membership functions. A compromise solution is obtained by geometric programming method. If the decision maker is not satisfied with this result, he/she may try to update the current solution to his/her satisfactory solution. In this way we implement man-machine interactive procedure to solve the problem through geometric programming method.

  9. Material inhomogeneities and their evolution a geometric approach

    CERN Document Server

    Epstein, Marcelo

    2007-01-01

    Presents a unified treatment of the inhomogeneity theory using some of the tools of modern differential geometry. This book deals with the geometrical description of uniform bodies and their homogeneity conditions. It also develops a theory of material evolution and discusses its relevance in various applied contexts.

  10. Geometric and Algebraic Approaches in the Concept of Complex Numbers

    Science.gov (United States)

    Panaoura, A.; Elia, I.; Gagatsis, A.; Giatilis, G.-P.

    2006-01-01

    This study explores pupils' performance and processes in tasks involving equations and inequalities of complex numbers requiring conversions from a geometric representation to an algebraic representation and conversions in the reverse direction, and also in complex numbers problem solving. Data were collected from 95 pupils of the final grade from…

  11. On geometric approach to Lie symmetries of differential-difference equations

    International Nuclear Information System (INIS)

    Li Hongjing; Wang Dengshan; Wang Shikun; Wu Ke; Zhao Weizhong

    2008-01-01

    Based upon Cartan's geometric formulation of differential equations, Harrison and Estabrook proposed a geometric approach for the symmetries of differential equations. In this Letter, we extend Harrison and Estabrook's approach to analyze the symmetries of differential-difference equations. The discrete exterior differential technique is applied in our approach. The Lie symmetry of (2+1)-dimensional Toda equation is investigated by means of our approach

  12. Kinematic approach to off-diagonal geometric phases of nondegenerate and degenerate mixed states

    International Nuclear Information System (INIS)

    Tong, D.M.; Oh, C.H.; Sjoeqvist, Erik; Filipp, Stefan; Kwek, L.C.

    2005-01-01

    Off-diagonal geometric phases have been developed in order to provide information of the geometry of paths that connect noninterfering quantal states. We propose a kinematic approach to off-diagonal geometric phases for pure and mixed states. We further extend the mixed-state concept proposed in [Phys. Rev. Lett. 90, 050403 (2003)] to degenerate density operators. The first- and second-order off-diagonal geometric phases are analyzed for unitarily evolving pairs of pseudopure states

  13. A Geometric Fuzzy-Based Approach for Airport Clustering

    Directory of Open Access Journals (Sweden)

    Maria Nadia Postorino

    2014-01-01

    Full Text Available Airport classification is a common need in the air transport field due to several purposes—such as resource allocation, identification of crucial nodes, and real-time identification of substitute nodes—which also depend on the involved actors’ expectations. In this paper a fuzzy-based procedure has been proposed to cluster airports by using a fuzzy geometric point of view according to the concept of unit-hypercube. By representing each airport as a point in the given reference metric space, the geometric distance among airports—which corresponds to a measure of similarity—has in fact an intrinsic fuzzy nature due to the airport specific characteristics. The proposed procedure has been applied to a test case concerning the Italian airport network and the obtained results are in line with expectations.

  14. An algebraic geometric approach to separation of variables

    CERN Document Server

    Schöbel, Konrad

    2015-01-01

    Konrad Schöbel aims to lay the foundations for a consequent algebraic geometric treatment of variable separation, which is one of the oldest and most powerful methods to construct exact solutions for the fundamental equations in classical and quantum physics. The present work reveals a surprising algebraic geometric structure behind the famous list of separation coordinates, bringing together a great range of mathematics and mathematical physics, from the late 19th century theory of separation of variables to modern moduli space theory, Stasheff polytopes and operads. "I am particularly impressed by his mastery of a variety of techniques and his ability to show clearly how they interact to produce his results.”   (Jim Stasheff)   Contents The Foundation: The Algebraic Integrability Conditions The Proof of Concept: A Complete Solution for the 3-Sphere The Generalisation: A Solution for Spheres of Arbitrary Dimension The Perspectives: Applications and Generalisations   Target Groups Scientists in the fie...

  15. Urbanisation and 3d Spatial - a Geometric Approach

    Science.gov (United States)

    Duncan, E. E.; Rahman, A. Abdul

    2013-09-01

    Urbanisation creates immense competition for space, this may be attributed to an increase in population owing to domestic and external tourism. Most cities are constantly exploring all avenues in maximising its limited space. Hence, urban or city authorities need to plan, expand and use such three dimensional (3D) space above, on and below the city space. Thus, difficulties in property ownership and the geometric representation of the 3D city space is a major challenge. This research, investigates the concept of representing a geometric topological 3D spatial model capable of representing 3D volume parcels for man-made constructions above and below the 3D surface volume parcel. A review of spatial data models suggests that the 3D TIN (TEN) model is significant and can be used as a unified model. The concepts, logical and physical models of 3D TIN for 3D volumes using tetrahedrons as the base geometry is presented and implemented to show man-made constructions above and below the surface parcel within a user friendly graphical interface. Concepts for 3D topology and 3D analysis are discussed. Simulations of this model for 3D cadastre are implemented. This model can be adopted by most countries to enhance and streamline geometric 3D property ownership for urban centres. 3D TIN concept for spatial modelling can be adopted for the LA_Spatial part of the Land Administration Domain Model (LADM) (ISO/TC211, 2012), this satisfies the concept of 3D volumes.

  16. Topological charge on the lattice: a field theoretical view of the geometrical approach

    International Nuclear Information System (INIS)

    Rastelli, L.; Rossi, P.; Vicari, E.

    1997-01-01

    We construct sequences of ''field theoretical'' lattice topological charge density operators which formally approach geometrical definitions in 2D CP N-1 models and 4D SU(N) Yang-Mills theories. The analysis of these sequences of operators suggests a new way of looking at the geometrical method, showing that geometrical charges can be interpreted as limits of sequences of field theoretical (analytical) operators. In perturbation theory, renormalization effects formally tend to vanish along such sequences. But, since the perturbative expansion is asymptotic, this does not necessarily lead to well-behaved geometrical limits. It indeed leaves open the possibility that non-perturbative renormalizations survive. (orig.)

  17. A Wave-Optics Approach to Paraxial Geometrical Laws Based on Continuity at Boundaries

    Science.gov (United States)

    Linares, J.; Nistal, M. C.

    2011-01-01

    We present a derivation of the paraxial geometrical laws starting from a wave-optics approach, in particular by using simple continuity conditions of paraxial spherical waves at boundaries (discontinuities) between optical media. Paraxial geometrical imaging and magnification laws, under refraction and reflection at boundaries, are derived for…

  18. A geometrical approach to two-dimensional Conformal Field Theory

    Science.gov (United States)

    Dijkgraaf, Robertus Henricus

    1989-09-01

    This thesis is organized in the following way. In Chapter 2 we will give a brief introduction to conformal field theory along the lines of standard quantum field theory, without any claims to originality. We introduce the important concepts of the stress-energy tensor, the Virasoro algebra, and primary fields. The general principles are demonstrated by fermionic and bosonic free field theories. This also allows us to discuss some general aspects of moduli spaces of CFT's. In particular, we describe in some detail the space of iiiequivalent toroidal comi)actificalions, giving examples of the quantum equivalences that we already mentioned. In Chapter 3 we will reconsider general quantum field theory from a more geometrical point of view, along the lines of the so-called operator formalism. Crucial to this approach will be the consideration of topology changing amplitudes. After a simple application to 2d topological theories, we proceed to give our second introduction to CFT, stressing the geometry behind it. In Chapter 4 the so-called rational conformal field theories are our object of study. These special CFT's have extended symmetries with only a finite number of representations. If an interpretation as non-linear sigma model exists, this extra symmetry can be seen as a kind of resonance effect due to the commensurability of the size of the string and the target space-time. The structure of rational CFT's is extremely rigid, and one of our results will be that the operator content of these models is—up to some discrete choices—completely determined by the symmetry algebra. The study of rational models is in its rigidity very analogous to finite group theory. In Chapter 5 this analogy is further pursued and substantiated. We will show how one can construct from general grounds rational conformal field theories from finite groups. These models are abstract versions of non-linear o-models describing string propagation on 'orbifoids.' An orbifold is a singular

  19. Type II Superstring Field Theory: Geometric Approach and Operadic Description

    CERN Document Server

    Jurco, Branislav

    2013-01-01

    We outline the construction of type II superstring field theory leading to a geometric and algebraic BV master equation, analogous to Zwiebach's construction for the bosonic string. The construction uses the small Hilbert space. Elementary vertices of the non-polynomial action are described with the help of a properly formulated minimal area problem. They give rise to an infinite tower of superstring field products defining a $\\mathcal{N}=1$ generalization of a loop homotopy Lie algebra, the genus zero part generalizing a homotopy Lie algebra. Finally, we give an operadic interpretation of the construction.

  20. Geometric approach to a massive p form duality

    International Nuclear Information System (INIS)

    Arias, Pio J.; Leal, Lorenzo; Perez-Mosquera, J. C.

    2003-01-01

    Massive theories of Abelian p forms are quantized in a generalized path representation that leads to a description of the phase space in terms of a pair of dual nonlocal operators analogous to the Wilson loop and the 't Hooft disorder operators. Special attention is devoted to the study of the duality between the topologically massive and self-dual models in 2+1 dimensions. It is shown that these models share a geometric representation in which just one nonlocal operator suffices to describe the observables

  1. Modeling thermodynamic distance, curvature and fluctuations a geometric approach

    CERN Document Server

    Badescu, Viorel

    2016-01-01

    This textbook aims to briefly outline the main directions in which the geometrization of thermodynamics has been developed in the last decades. The textbook is accessible to people trained in thermal sciences but not necessarily with solid formation in mathematics. For this, in the first chapters a summary of the main mathematical concepts is made. In some sense, this makes the textbook self-consistent. The rest of the textbook consists of a collection of results previously obtained in this young branch of thermodynamics. The manner of presentation used throughout the textbook is adapted for ease of access of readers with education in natural and technical sciences.

  2. Geometrical Optimization Approach to Isomerization: Models and Limitations.

    Science.gov (United States)

    Chang, Bo Y; Shin, Seokmin; Engel, Volker; Sola, Ignacio R

    2017-11-02

    We study laser-driven isomerization reactions through an excited electronic state using the recently developed Geometrical Optimization procedure. Our goal is to analyze whether an initial wave packet in the ground state, with optimized amplitudes and phases, can be used to enhance the yield of the reaction at faster rates, driven by a single picosecond pulse or a pair of femtosecond pulses resonant with the electronic transition. We show that the symmetry of the system imposes limitations in the optimization procedure, such that the method rediscovers the pump-dump mechanism.

  3. Error performance analysis in K-tier uplink cellular networks using a stochastic geometric approach

    KAUST Repository

    Afify, Laila H.; Elsawy, Hesham; Al-Naffouri, Tareq Y.; Alouini, Mohamed-Slim

    2015-01-01

    -in-Distribution approach that utilizes stochastic geometric tools to account for the network geometry in the performance characterization. Different from the other stochastic geometry models adopted in the literature, the developed analysis accounts for important

  4. Lie-Hamilton systems on curved spaces: a geometrical approach

    Science.gov (United States)

    Herranz, Francisco J.; de Lucas, Javier; Tobolski, Mariusz

    2017-12-01

    A Lie-Hamilton system is a nonautonomous system of first-order ordinary differential equations describing the integral curves of a t-dependent vector field taking values in a finite-dimensional Lie algebra, a Vessiot-Guldberg Lie algebra, of Hamiltonian vector fields relative to a Poisson structure. Its general solution can be written as an autonomous function, the superposition rule, of a generic finite family of particular solutions and a set of constants. We pioneer the study of Lie-Hamilton systems on Riemannian spaces (sphere, Euclidean and hyperbolic plane), pseudo-Riemannian spaces (anti-de Sitter, de Sitter, and Minkowski spacetimes) as well as on semi-Riemannian spaces (Newtonian spacetimes). Their corresponding constants of motion and superposition rules are obtained explicitly in a geometric way. This work extends the (graded) contraction of Lie algebras to a contraction procedure for Lie algebras of vector fields, Hamiltonian functions, and related symplectic structures, invariants, and superposition rules.

  5. Illustrating ontogenetic change in the dentition of the Nile monitor lizard, Varanus niloticus: a case study in the application of geometric morphometric methods for the quantification of shape-size heterodonty.

    Science.gov (United States)

    D'Amore, Domenic C

    2015-05-01

    Many recent attempts have been made to quantify heterodonty in non-mammalian vertebrates, but the majority of these are limited to Euclidian measurements. One taxon frequently investigated is Varanus niloticus, the Nile monitor. Juveniles possess elongate, pointed teeth (caniniform) along the entirety of the dental arcade, whereas adults develop large, bulbous distal teeth (molariform). The purpose of this study was to present a geometric morphometric method to quantify V. niloticus heterodonty through ontogeny that may be applied to other non-mammalian taxa. Data were collected from the entire tooth row of 19 dry skull specimens. A semilandmark analysis was conducted on the outline of the photographed teeth, and size and shape were derived. Width was also measured with calipers. From these measures, sample ranges and allometric functions were created using multivariate statistical analyses for each tooth position separately, as well as overall measures of heterodonty for each specimen based on morphological disparity. The results confirm and expand upon previous studies, showing measurable shape-size heterodonty in the species with significant differences at each tooth position. Tooth size increases with body size at most positions, and the allometric coefficient increases at more distal positions. Width shows a dramatic increase at the distal positions with ontogeny, often displaying pronounced positive allometry. Dental shape varied in two noticeable ways, with the first composing the vast majority of shape variance: (i) caniniformy vs. molariformy and (ii) mesially leaning, 'rounded' apices vs. distally leaning, 'pointed' apices. The latter was twice as influential in the mandible, a consequence of host bone shape. Mesial teeth show no significant shape change with growth, whereas distal teeth change significantly due primarily to an increase in molariformy. Overall, heterodonty increases with body size concerning both tooth size and shape, but shape

  6. Theoretical approach for plasma series resonance effect in geometrically symmetric dual radio frequency plasma

    International Nuclear Information System (INIS)

    Bora, B.; Bhuyan, H.; Favre, M.; Wyndham, E.; Chuaqui, H.

    2012-01-01

    Plasma series resonance (PSR) effect is well known in geometrically asymmetric capacitively couple radio frequency plasma. However, plasma series resonance effect in geometrically symmetric plasma has not been properly investigated. In this work, a theoretical approach is made to investigate the plasma series resonance effect and its influence on Ohmic and stochastic heating in geometrically symmetric discharge. Electrical asymmetry effect by means of dual frequency voltage waveform is applied to excite the plasma series resonance. The results show considerable variation in heating with phase difference between the voltage waveforms, which may be applicable in controlling the plasma parameters in such plasma.

  7. A geometric approach to aortic root surgical anatomy.

    Science.gov (United States)

    Contino, Monica; Mangini, Andrea; Lemma, Massimo Giovanni; Romagnoni, Claudia; Zerbi, Pietro; Gelpi, Guido; Antona, Carlo

    2016-01-01

    The aim of this study was the analysis of the geometrical relationships between the different structures constituting the aortic root, with particular attention to interleaflet triangles, haemodynamic ventriculo-arterial junction and functional aortic annulus in normal subjects. Sixteen formol-fixed human hearts with normal aortic roots were studied. The aortic root was isolated, sectioned at the midpoint of the non-coronary sinus, spread apart and photographed by a high-resolution digital camera. After calibration and picture resizing, the software AutoCAD 2004 was used to identify and measure all the elements of the interleaflets triangles and of the aortic root that were objects of our analysis. Multiple comparisons were performed with one-way analysis of variance for continuous data and with Kruskal-Wallis analysis for non-continuous data. Linear regression and Pearson's product correlation were used to correlate root element dimensions when appropriate. Student's t-test was used to compare means for unpaired data. Heron's formula was applied to estimate the functional aortic annular diameters. The non coronary-left coronary interleaflets triangles were larger, followed by inter-coronary and right-non-coronary ones. The apical angle is <60° and its standard deviation can be considered an asymmetry index. The sinu-tubular junction was shown to be 10% larger than the virtual basal ring (VBR). The mathematical relationship between the haemodynamic ventriculo-arterial junction and the VBR calculated by linear regression and expressed in terms of the diameter was: haemodynamic ventriculo-arterial junction = 2.29 VBR (diameter) + 47. Conservative aortic surgery is based on a better understanding of aortic root anatomy and physiology. The relationships among its elements are of paramount importance during aortic valve repair/sparing procedures and they can be useful also in echocardiographic analysis and in computed tomography reconstruction. © The Author 2015

  8. Geometrical optics in the near field: local plane-interface approach with evanescent waves.

    Science.gov (United States)

    Bose, Gaurav; Hyvärinen, Heikki J; Tervo, Jani; Turunen, Jari

    2015-01-12

    We show that geometrical models may provide useful information on light propagation in wavelength-scale structures even if evanescent fields are present. We apply a so-called local plane-wave and local plane-interface methods to study a geometry that resembles a scanning near-field microscope. We show that fair agreement between the geometrical approach and rigorous electromagnetic theory can be achieved in the case where evanescent waves are required to predict any transmission through the structure.

  9. Exfoliative Cytology in the Oral Mucosa of Patients with Fanconi Anaemia: A Morphometric Approach

    Directory of Open Access Journals (Sweden)

    Maria Angela Naval Machado

    2017-04-01

    Full Text Available Patients with Fanconi anaemia (FA are prone to develop squamous cell carcinomas at an early age. Exfoliative cytology can be used to detect changes to the health of the oral mucosa. Objective: The aim of this study was to evaluate morphometrical and morphological changes using exfoliative cytology and to analyse and quantify the proliferative activity using silver nucleolar organiser regions (AgNOR in epithelial cells of the tongue in FA patients,after haematopoietic stem cell transplantation (HSCT. Methods: Oral smears were collected from the tongues of 20 FA children and adolescents after haematopoietic stem cell transplantation (FA and 20 healthy children (C using exfoliative cytology. The smears were stained using the Papanicolaou technique and silver impregnation. The cells were morphologically analysed and the nuclear area (NA, the cytoplasmic area (CA, and the nucleusto-cytoplasm area ratio (NA/CA were calculated. Results: Mean values for the FA and C groups were: NA (71.85 and 55.21μm.; p< 0.01; CA (2127.48 and 1441.61μm.; p< 0.01; NA/CA (0.03 and 0.04; p< 0.01, respectively. A significant increase in the NA and CA for the FA group (p< 0.01 was seen, and an alteration in the NA/CA ratio. No morphological differences were found between the groups. Class I smears were predominant in both groups. No differences were found between the groups for the mean values of AgNORs per nucleus. Conclusion: This study suggests that morphological changes occurred in the oral epithelium cells of children and adolescents with Fanconi anaemia when subjected to HSCT.

  10. Symmetries of stochastic differential equations: A geometric approach

    Energy Technology Data Exchange (ETDEWEB)

    De Vecchi, Francesco C., E-mail: francesco.devecchi@unimi.it; Ugolini, Stefania, E-mail: stefania.ugolini@unimi.it [Dipartimento di Matematica, Università degli Studi di Milano, via Saldini 50, Milano (Italy); Morando, Paola, E-mail: paola.morando@unimi.it [DISAA, Università degli Studi di Milano, via Celoria 2, Milano (Italy)

    2016-06-15

    A new notion of stochastic transformation is proposed and applied to the study of both weak and strong symmetries of stochastic differential equations (SDEs). The correspondence between an algebra of weak symmetries for a given SDE and an algebra of strong symmetries for a modified SDE is proved under suitable regularity assumptions. This general approach is applied to a stochastic version of a two dimensional symmetric ordinary differential equation and to the case of two dimensional Brownian motion.

  11. Biometric and morphometric studies of Perna viridis and Perna indica along the southwest coast of India: a statistical approach

    Digital Repository Service at National Institute of Oceanography (India)

    Jayalakshmy, K.V.; Nair, M.; DileepKumar, R.; Vijayan, M.

    morphometric gradient groups (spat and adult), indicating the different phenotypic plasticity between them. The factor scores classified P. indica as a unimodal, positively skewed leptokurtic population and P. viridis as a unimodal, negatively skewed...

  12. Can skull form predict the shape of the temporomandibular joint? A study using geometric morphometrics on the skulls of wolves and domestic dogs.

    Science.gov (United States)

    Curth, Stefan; Fischer, Martin S; Kupczik, Kornelius

    2017-11-01

    The temporomandibular joint (TMJ) conducts and restrains masticatory movements between the mammalian cranium and the mandible. Through this functional integration, TMJ morphology in wild mammals is strongly correlated with diet, resulting in a wide range of TMJ variations. However, in artificially selected and closely related domestic dogs, dietary specialisations between breeds can be ruled out as a diversifying factor although they display an enormous variation in TMJ morphology. This raises the question of the origin of this variation. Here we hypothesise that, even in the face of reduced functional demands, TMJ shape in dogs can be predicted by skull form; i.e. that the TMJ is still highly integrated in the dog skull. If true, TMJ variation in the dog would be a plain by-product of the enormous cranial variation in dogs and its genetic causes. We addressed this hypothesis using geometric morphometry on a data set of 214 dog and 60 wolf skulls. We digitized 53 three-dimensional landmarks of the skull and the TMJ on CT-based segmentations and compared (1) the variation between domestic dog and wolf TMJs (via principal component analysis) and (2) the pattern of covariation of skull size, flexion and rostrum length with TMJ shape (via regression of centroid size on shape and partial least squares analyses). We show that the TMJ in domestic dogs is significantly more diverse than in wolves: its shape covaries significantly with skull size, flexion and rostrum proportions in patterns which resemble those observed in primates. Similar patterns in canids, which are carnivorous, and primates, which are mostly frugivorous imply the existence of basic TMJ integration patterns which are independent of dietary adaptations. However, only limited amounts of TMJ variation in dogs can be explained by simple covariation with overall skull geometry. This implies that the final TMJ shape is gained partially independently of the rest of the skull. Copyright © 2017 Elsevier Gmb

  13. A new approach to estimate the geometrical factors, solid angle approximation, geometrical efficiency and their use in basic interaction cross section measurements

    CERN Document Server

    Rao, D V; Brunetti, A; Gigante, G E; Takeda, T; Itai, Y; Akatsuka, T

    2002-01-01

    A new approach is developed to estimate the geometrical factors, solid angle approximation and geometrical efficiency for a system with experimental arrangements using X-ray tube and secondary target as an excitation source in order to produce the nearly monoenergetic K alpha radiation to excite the sample. The variation of the solid angle is studied by changing the radius and length of the collimators towards and away from the source and sample. From these values the variation of the total solid angle and geometrical efficiency is deduced and the optimum value is used for the experimental work. (authors)

  14. A new approach to estimate the geometrical factors, solid angle approximation, geometrical efficiency and their use in basic interaction cross section measurements

    Energy Technology Data Exchange (ETDEWEB)

    Rao, D.V.; Cesareo, R.; Brunetti, A. [Sassari University, Istituto di Matematica e Fisica (Italy); Gigante, G.E. [Roma Universita, Dipt. di Fisica (Italy); Takeda, T.; Itai, Y. [Tsukuba Univ., Ibaraki (Japan). Inst. of Clinical Medicine; Akatsuka, T. [Yamagata Univ., Yonezawa (Japan). Faculty of Engineering

    2002-10-01

    A new approach is developed to estimate the geometrical factors, solid angle approximation and geometrical efficiency for a system with experimental arrangements using X-ray tube and secondary target as an excitation source in order to produce the nearly monoenergetic K{alpha} radiation to excite the sample. The variation of the solid angle is studied by changing the radius and length of the collimators towards and away from the source and sample. From these values the variation of the total solid angle and geometrical efficiency is deduced and the optimum value is used for the experimental work. (authors)

  15. A new approach to estimate the geometrical factors, solid angle approximation, geometrical efficiency and their use in basic interaction cross section measurements

    Science.gov (United States)

    Rao, D. V.; Cesareo, R.; Brunetti, A.; Gigante, G. E.; Takeda, T.; Itai, Y.; Akatsuka, T.

    2002-10-01

    A new approach is developed to estimate the geometrical factors, solid angle approximation and geometrical efficiency for a system with experimental arrangements using X-ray tube and secondary target as an excitation source in order to produce the nearly monoenergetic Kα radiation to excite the sample. The variation of the solid angle is studied by changing the radius and length of the collimators towards and away from the source and sample. From these values the variation of the total solid angle and geometrical efficiency is deduced and the optimum value is used for the experimental work.

  16. Determination of a novel size proxy in comparative morphometrics

    Directory of Open Access Journals (Sweden)

    Andrew Gallagher

    2015-09-01

    Full Text Available Absolute size is a critical determinant of organismal biology, yet there exists no real consensus as to what particular metric of ‘size’ is empirically valid in assessments of extinct mammalian taxa. The methodological approach of JE Mosimann has found extensive favour in ‘size correction’ in comparative morphometrics, but not ‘size prediction’ in palaeontology and palaeobiology. Analyses of five distinct mammalian data sets confirm that a novel size variate (GMSize derived from k=8 dimensions of the postcranial skeleton effectively satisfies all expectations of the Jolicoeur–Mosimann theorem of univariate and multivariate size. On the basis of strong parametric correlations between the k=8 variates and between scores derived from the first principal component and geometric mean size (GMSize in all series, this novel size variable has considerable utility in comparative vertebrate morphometrics and palaeobiology as an appropriate descriptor of individual size in extant and extinct taxa.

  17. Chaos based on Riemannian geometric approach to Abelian-Higgs dynamical system

    International Nuclear Information System (INIS)

    Kawabe, Tetsuji

    2003-01-01

    Based on the Riemannian geometric approach, we study chaos of the Abelian-Higgs dynamical system derived from a classical field equation consisting of a spatially homogeneous Abelian gauge field and Higgs field. Using the global indicator of chaos formulated by the sectional curvature of the ambient manifold, we show that this approach brings the same qualitative and quantitative information about order and chaos as has been provided by the Lyapunov exponents in the conventional and phenomenological approach. We confirm that the mechanism of chaos is a parametric instability of the system. By analyzing a close relation between the sectional curvature and the Gaussian curvature, we point out that the Toda-Brumer criterion becomes a sufficient condition to the criterion based on this geometric approach as to the stability condition

  18. Geometric Form Drawing: A Perceptual-Motor Approach to Preventive Remediation (The Steiner Approach)

    Science.gov (United States)

    Ogletree, Earl J.

    1975-01-01

    Provided is a rationale for geometric form drawing developed by Rudolf Steiner as a tool to develop motor coordination, perceptual skills, and cognition for mentally retarded and perceptually handicapped children. (Author/CL)

  19. Extended Endoscopic Endonasal Approaches for Cerebral Aneurysms: Anatomical, Virtual Reality and Morphometric Study

    Directory of Open Access Journals (Sweden)

    Alberto Di Somma

    2014-01-01

    Full Text Available Introduction. The purpose of the present contribution is to perform a detailed anatomic and virtual reality three-dimensional stereoscopic study in order to test the effectiveness of the extended endoscopic endonasal approaches for selected anterior and posterior circulation aneurysms. Methods. The study was divided in two main steps: (1 simulation step, using a dedicated Virtual Reality System (Dextroscope, Volume Interactions; (2 dissection step, in which the feasibility to reach specific vascular territory via the nose was verified in the anatomical laboratory. Results. Good visualization and proximal and distal vascular control of the main midline anterior and posterior circulation territory were achieved during the simulation step as well as in the dissection step (anterior communicating complex, internal carotid, ophthalmic, superior hypophyseal, posterior cerebral and posterior communicating, basilar, superior cerebellar, anterior inferior cerebellar, vertebral, and posterior inferior cerebellar arteries. Conclusion. The present contribution is intended as strictly anatomic study in which we highlighted some specific anterior and posterior circulation aneurysms that can be reached via the nose. For clinical applications of these approaches, some relevant complications, mainly related to the endonasal route, such as proximal and distal vascular control, major arterial bleeding, postoperative cerebrospinal fluid leak, and olfactory disturbances must be considered.

  20. Present State of the Art of Composite Fabric Forming: Geometrical and Mechanical Approaches

    Science.gov (United States)

    Cherouat, Abel; Borouchaki, Houman

    2009-01-01

    Continuous fibre reinforced composites are now firmly established engineering materials for the manufacture of components in the automotive and aerospace industries. In this respect, composite fabrics provide flexibility in the design manufacture. The ability to define the ply shapes and material orientation has allowed engineers to optimize the composite properties of the parts. The formulation of new numerical models for the simulation of the composite forming processes must allow for reduction in the delay in manufacturing and an optimization of costs in an integrated design approach. We propose two approaches to simulate the deformation of woven fabrics: geometrical and mechanical approaches.

  1. A geometric approach to multiperiod mean variance optimization of assets and liabilities

    OpenAIRE

    Leippold, Markus; Trojani, Fabio; Vanini, Paolo

    2005-01-01

    We present a geometric approach to discrete time multiperiod mean variance portfolio optimization that largely simplifies the mathematical analysis and the economic interpretation of such model settings. We show that multiperiod mean variance optimal policies can be decomposed in an orthogonal set of basis strategies, each having a clear economic interpretation. This implies that the corresponding multi period mean variance frontiers are spanned by an orthogonal basis of dynamic returns. Spec...

  2. Demystifying the memory effect: A geometrical approach to understanding speckle correlations

    Science.gov (United States)

    Prunty, Aaron C.; Snieder, Roel K.

    2017-05-01

    The memory effect has seen a surge of research into its fundamental properties and applications since its discovery by Feng et al. [Phys. Rev. Lett. 61, 834 (1988)]. While the wave trajectories for which the memory effect holds are hidden implicitly in the diffusion probability function [Phys. Rev. B 40, 737 (1989)], the physical intuition of why these trajectories satisfy the memory effect has often been masked by the derivation of the memory correlation function itself. In this paper, we explicitly derive the specific trajectories through a random medium for which the memory effect holds. Our approach shows that the memory effect follows from a simple conservation argument, which imposes geometrical constraints on the random trajectories that contribute to the memory effect. We illustrate the time-domain effects of these geometrical constraints with numerical simulations of pulse transmission through a random medium. The results of our derivation and numerical simulations are consistent with established theory and experimentation.

  3. Geometric Lagrangian approach to the physical degree of freedom count in field theory

    Science.gov (United States)

    Díaz, Bogar; Montesinos, Merced

    2018-05-01

    To circumvent some technical difficulties faced by the geometric Lagrangian approach to the physical degree of freedom count presented in the work of Díaz, Higuita, and Montesinos [J. Math. Phys. 55, 122901 (2014)] that prevent its direct implementation to field theory, in this paper, we slightly modify the geometric Lagrangian approach in such a way that its resulting version works perfectly for field theory (and for particle systems, of course). As in previous work, the current approach also allows us to directly get the Lagrangian constraints, a new Lagrangian formula for the counting of the number of physical degrees of freedom, the gauge transformations, and the number of first- and second-class constraints for any action principle based on a Lagrangian depending on the fields and their first derivatives without performing any Dirac's canonical analysis. An advantage of this approach over the previous work is that it also allows us to handle the reducibility of the constraints and to get the off-shell gauge transformations. The theoretical framework is illustrated in 3-dimensional generalized general relativity (Palatini and Witten's exotic actions), Chern-Simons theory, 4-dimensional BF theory, and 4-dimensional general relativity given by Palatini's action with a cosmological constant.

  4. Random Process Theory Approach to Geometric Heterogeneous Surfaces: Effective Fluid-Solid Interaction

    Science.gov (United States)

    Khlyupin, Aleksey; Aslyamov, Timur

    2017-06-01

    Realistic fluid-solid interaction potentials are essential in description of confined fluids especially in the case of geometric heterogeneous surfaces. Correlated random field is considered as a model of random surface with high geometric roughness. We provide the general theory of effective coarse-grained fluid-solid potential by proper averaging of the free energy of fluid molecules which interact with the solid media. This procedure is largely based on the theory of random processes. We apply first passage time probability problem and assume the local Markov properties of random surfaces. General expression of effective fluid-solid potential is obtained. In the case of small surface irregularities analytical approximation for effective potential is proposed. Both amorphous materials with large surface roughness and crystalline solids with several types of fcc lattices are considered. It is shown that the wider the lattice spacing in terms of molecular diameter of the fluid, the more obtained potentials differ from classical ones. A comparison with published Monte-Carlo simulations was discussed. The work provides a promising approach to explore how the random geometric heterogeneity affects on thermodynamic properties of the fluids.

  5. Finsler metrics—a global approach with applications to geometric function theory

    CERN Document Server

    Abate, Marco

    1994-01-01

    Complex Finsler metrics appear naturally in complex analysis. To develop new tools in this area, the book provides a graduate-level introduction to differential geometry of complex Finsler metrics. After reviewing real Finsler geometry stressing global results, complex Finsler geometry is presented introducing connections, Kählerianity, geodesics, curvature. Finally global geometry and complex Monge-Ampère equations are discussed for Finsler manifolds with constant holomorphic curvature, which are important in geometric function theory. Following E. Cartan, S.S. Chern and S. Kobayashi, the global approach carries the full strength of hermitian geometry of vector bundles avoiding cumbersome computations, and thus fosters applications in other fields.

  6. Frequency-Domain Robust Performance Condition for Controller Uncertainty in SISO LTI Systems: A Geometric Approach

    Directory of Open Access Journals (Sweden)

    Vahid Raissi Dehkordi

    2009-01-01

    Full Text Available This paper deals with the robust performance problem of a linear time-invariant control system in the presence of robust controller uncertainty. Assuming that plant uncertainty is modeled as an additive perturbation, a geometrical approach is followed in order to find a necessary and sufficient condition for robust performance in the form of a bound on the magnitude of controller uncertainty. This frequency domain bound is derived by converting the problem into an optimization problem, whose solution is shown to be more time-efficient than a conventional structured singular value calculation. The bound on controller uncertainty can be used in controller order reduction and implementation problems.

  7. Geometric Approach to Quantum Statistical Mechanics and Application to Casimir Energy and Friction Properties

    International Nuclear Information System (INIS)

    Ichinose, Shoichi

    2010-01-01

    A geometric approach to general quantum statistical systems (including the harmonic oscillator) is presented. It is applied to Casimir energy and the dissipative system with friction. We regard the (N+1)-dimensional Euclidean coordinate system (X i ,τ) as the quantum statistical system of N quantum (statistical) variables (X τ ) and one Euclidean time variable (t). Introducing paths (lines or hypersurfaces) in this space (X τ ,t), we adopt the path-integral method to quantize the mechanical system. This is a new view of (statistical) quantization of the mechanical system. The system Hamiltonian appears as the area. We show quantization is realized by the minimal area principle in the present geometric approach. When we take a line as the path, the path-integral expressions of the free energy are shown to be the ordinary ones (such as N harmonic oscillators) or their simple variation. When we take a hyper-surface as the path, the system Hamiltonian is given by the area of the hyper-surface which is defined as a closed-string configuration in the bulk space. In this case, the system becomes a O(N) non-linear model. We show the recently-proposed 5 dimensional Casimir energy (ArXiv:0801.3064,0812.1263) is valid. We apply this approach to the visco-elastic system, and present a new method using the path-integral for the calculation of the dissipative properties.

  8. Morfometría geométrica en cinco especies de Buthidae y Scorpionidae (Arachnida: Scorpiones de Venezuela Geometric morphometrics in five species of Buthidae and Scorpionidae (Arachnida: Scorpiones from Venezuela

    Directory of Open Access Journals (Sweden)

    Walter Y. Bechara

    2012-06-01

    Full Text Available En Venezuela, la escorpiofauna consta de 17 géneros y 202 especies. En algunos grupos la taxonomía no ha sido aclarada; por lo tanto, son necesarias investigaciones adicionales que contribuyan a mejorar el conocimiento sobre la identidad taxonómica y relaciones entre sus componentes. La morfometría geométrica es una herramienta que ha sido utilizada como apoyo a la sistemática en distintos organismos. El objetivo del presente trabajo fue analizar la conformación y tamaño isométrico en 5 especies de escorpiones. Se fotografiaron 266 individuos de 4 especies de Buthidae: Centruroides testaceus, Rhopalurus laticauda, Tityus clathratus y T. discrepans, y una de Scorpionidae: Tarsoporosus yustizi. Se registraron configuraciones de coordenadas (x,y en 5 estructuras a partir de puntos anatómicos de referencia (PAR y PAR deslizantes. Los resultados mostraron separación completa de las especies de Buthidae por medio de tricobotrias dorsales en la patela del pedipalpo, y una consistente separación en el nivel familiar en las estructuras restantes. Las placas delgadas permitieron la visualización de compresión horizontal del esternón en las especies de Buthidae y compresión vertical en la de Scorpionidae. Se determinó la similitud de coxas, quela y caparazón entre R. laticauda y C. testaceus. La disposición de tricobotrias y la conformación del esternón permitió la diferenciación entre T. discrepans y T. clathratus.The Venezuelan scorpionfauna comprises 17 genera and 202 species. In some taxa the taxonomy is unclear, and additional studies that contribute to the knowledge about taxonomic identity and relationships are necessary. Geometric morphometrics is a tool that has been used as support to the systematics in different organisms. The goal was to analize the isometric size and conformation in five scorpions species. We photographed 266 individuals of four speceis of Buthidae: Centruroides testaceus, Rhopalurus laticauda, Tityus

  9. Ventricular dyssynchrony assessed by gated myocardial perfusion SPECT using a geometrical approach: a feasibility study

    International Nuclear Information System (INIS)

    Veen, Berlinda J. van der; Younis, Imad Al; Ajmone-Marsan, Nina; Bax, Jeroen J.; Westenberg, Jos J.M.; Roos, Albert de; Stokkel, Marcel P.M.

    2012-01-01

    Left ventricular dyssynchrony may predict response to cardiac resynchronization therapy and may well predict adverse cardiac events. Recently, a geometrical approach for dyssynchrony analysis of myocardial perfusion scintigraphy (MPS) was introduced. In this study the feasibility of this geometrical method to detect dyssynchrony was assessed in a population with a normal MPS and in patients with documented ventricular dyssynchrony. For the normal population 80 patients (40 men and 40 women) with normal perfusion (summed stress score ≤2 and summed rest score ≤2) and function (left ventricular ejection fraction 55-80%) on MPS were selected; 24 heart failure patients with proven dyssynchrony on MRI were selected for comparison. All patients underwent a 2-day stress/rest MPS protocol. Perfusion, function and dyssynchrony parameters were obtained by the Corridor4DM software package (Version 6.1). For the normal population time to peak motion was 42.8 ± 5.1% RR cycle, SD of time to peak motion was 3.5 ± 1.4% RR cycle and bandwidth was 18.2 ± 6.0% RR cycle. No significant gender-related differences or differences between rest and post-stress acquisition were found for the dyssynchrony parameters. Discrepancies between the normal and abnormal populations were most profound for the mean wall motion (p value <0.001), SD of time to peak motion (p value <0.001) and bandwidth (p value <0.001). It is feasible to quantify ventricular dyssynchrony in MPS using the geometrical approach as implemented by Corridor4DM. (orig.)

  10. Autocorrelated process control: Geometric Brownian Motion approach versus Box-Jenkins approach

    Science.gov (United States)

    Salleh, R. M.; Zawawi, N. I.; Gan, Z. F.; Nor, M. E.

    2018-04-01

    Existing of autocorrelation will bring a significant effect on the performance and accuracy of process control if the problem does not handle carefully. When dealing with autocorrelated process, Box-Jenkins method will be preferred because of the popularity. However, the computation of Box-Jenkins method is too complicated and challenging which cause of time-consuming. Therefore, an alternative method which known as Geometric Brownian Motion (GBM) is introduced to monitor the autocorrelated process. One real case of furnace temperature data is conducted to compare the performance of Box-Jenkins and GBM methods in monitoring autocorrelation process. Both methods give the same results in terms of model accuracy and monitoring process control. Yet, GBM is superior compared to Box-Jenkins method due to its simplicity and practically with shorter computational time.

  11. Morphometric Analysis to Prioritize Sub-Watershed for Flood Risk Assessment in Central Karakoram National Park Using Gis/rs Approach

    Science.gov (United States)

    Syed, N. H.; Rehman, A. A.; Hussain, D.; Ishaq, S.; Khan, A. A.

    2017-11-01

    Morphometric analysis is vital for any watershed investigation and it is inevitable for flood risk assessment in sub-watershed basins. Present study undertaken to carry out critical evaluation and assessment of sub watershed morphological parameters for flood risk assessment of Central Karakorum National Park (CKNP), where Geographical information system and remote sensing (GIS & RS) approach used for quantifying the parameter and mapping of sub watershed units. ASTER DEM used as a geo-spatial data for watershed delineation and stream network. Morphometric analysis carried out using spatial analyst tool of ArcGIS 10.2. The parameters included were bifurcation ratio (Rb), Drainage Texture (Rt), Circulatory ratio (Rc), Elongated ratio (Re), Drainage density (Dd), Stream Length (Lu), Stream order (Su), Slope and Basin length (Lb) have calculated separately. The analysis revealed that the stream order varies from order 1 to 6 and the total numbers of stream segments of all orders were 52. Multi criteria analysis process used to calculate the risk factor. As an accomplished result, map of sub watershed prioritization developed using weighted standardized risk factor. These results helped to understand sensitivity of flush floods in different sub watersheds of the study area and leaded to better management of the mountainous regions in prospect of flush floods.

  12. An efficient approach for computing the geometrical optics field reflected from a numerically specified surface

    Science.gov (United States)

    Mittra, R.; Rushdi, A.

    1979-01-01

    An approach for computing the geometrical optic fields reflected from a numerically specified surface is presented. The approach includes the step of deriving a specular point and begins with computing the reflected rays off the surface at the points where their coordinates, as well as the partial derivatives (or equivalently, the direction of the normal), are numerically specified. Then, a cluster of three adjacent rays are chosen to define a 'mean ray' and the divergence factor associated with this mean ray. Finally, the ampilitude, phase, and vector direction of the reflected field at a given observation point are derived by associating this point with the nearest mean ray and determining its position relative to such a ray.

  13. Morphometric and molecular identification of individual barnacle cyprids from wild plankton: an approach to detecting fouling and invasive barnacle species.

    Science.gov (United States)

    Chen, Hsi-Nien; Høeg, Jens T; Chan, Benny K K

    2013-01-01

    The present study used DNA barcodes to identify individual cyprids to species. This enables accurate quantification of larvae of potential fouling species in the plankton. In addition, it explains the settlement patterns of barnacles and serves as an early warning system of unwanted immigrant species. Sequences from a total of 540 individual cypris larvae from Taiwanese waters formed 36 monophyletic clades (species) in a phylogenetic tree. Of these clades, 26 were identified to species, but 10 unknown monophyletic clades represented non-native species. Cyprids of the invasive barnacle, Megabalanus cocopoma, were identified. Multivariate analysis of antennular morphometric characters revealed three significant clusters in a nMDS plot, viz. a bell-shaped attachment organ (most species), a shoe-shaped attachment organ (some species), and a spear-shaped attachment organ (coral barnacles only). These differences in attachment organ structure indicate that antennular structures interact directly with the diverse substrata involved in cirripede settlement.

  14. Geometrical Approach to the Grid System in the KOPEC Pilot Code

    International Nuclear Information System (INIS)

    Lee, E. J.; Park, C. E.; Lee, S. Y.

    2008-01-01

    KOPEC has been developing a pilot code to analyze two phase flow. The earlier version of the pilot code adopts the geometry with one-dimensional structured mesh system. As the pilot code is required to handle more complex geometries, a systematic geometrical approach to grid system has been introduced. Grid system can be classified as two types; structured grid system and unstructured grid system. The structured grid system is simple to apply but is less flexible than the other. The unstructured grid system is more complicated than the structured grid system. But it is more flexible to model the geometry. Therefore, two types of grid systems are utilized to allow code users simplicity as well as the flexibility

  15. Error performance analysis in K-tier uplink cellular networks using a stochastic geometric approach

    KAUST Repository

    Afify, Laila H.

    2015-09-14

    In this work, we develop an analytical paradigm to analyze the average symbol error probability (ASEP) performance of uplink traffic in a multi-tier cellular network. The analysis is based on the recently developed Equivalent-in-Distribution approach that utilizes stochastic geometric tools to account for the network geometry in the performance characterization. Different from the other stochastic geometry models adopted in the literature, the developed analysis accounts for important communication system parameters and goes beyond signal-to-interference-plus-noise ratio characterization. That is, the presented model accounts for the modulation scheme, constellation type, and signal recovery techniques to model the ASEP. To this end, we derive single integral expressions for the ASEP for different modulation schemes due to aggregate network interference. Finally, all theoretical findings of the paper are verified via Monte Carlo simulations.

  16. Generalization of the geometric optical series approach for nonadiabatic scattering problems

    International Nuclear Information System (INIS)

    Herman, M.F.

    1982-01-01

    The geometric optical series approach of Bremmer is generalized for multisurface nonadiabatic scattering problems. This method yields the formal solution of the Schroedinger equation as an infinite series of multiple integrals. The zeroth order term corresponds to WKB propagation on a single adiabatic surface, while the general Nth order term involves N reflections and/or transitions between surfaces accompanied by ''free,'' single surface semiclassical propagation between the points of reflection and transition. Each term is integrated over all possible transition and reflection points. The adiabatic and diabatic limits of this expression are discussed. Numerical results, in which all reflections are ignored, are presented for curve crossing and noncrossing problems. These results are compared to exact quantum results and are shown to be highly accurate

  17. Proportional-delayed controllers design for LTI-systems: a geometric approach

    Science.gov (United States)

    Hernández-Díez, J.-E.; Méndez-Barrios, C.-F.; Mondié, S.; Niculescu, S.-I.; González-Galván, E. J.

    2018-04-01

    This paper focuses on the design of P-δ controllers for single-input-single-output linear time-invariant systems. The basis of this work is a geometric approach allowing to partitioning the parameter space in regions with constant number of unstable roots. This methodology defines the hyper-planes separating the aforementioned regions and characterises the way in which the number of unstable roots changes when crossing such a hyper-plane. The main contribution of the paper is that it provides an explicit tool to find P-δ gains ensuring the stability of the closed-loop system. In addition, the proposed methodology allows to design a non-fragile controller with a desired exponential decay rate σ. Several numerical examples illustrate the results and a haptic experimental set-up shows the effectiveness of P-δ controllers.

  18. Geometrical optics approach in liquid crystal films with three-dimensional director variations.

    Science.gov (United States)

    Panasyuk, G; Kelly, J; Gartland, E C; Allender, D W

    2003-04-01

    A formal geometrical optics approach (GOA) to the optics of nematic liquid crystals whose optic axis (director) varies in more than one dimension is described. The GOA is applied to the propagation of light through liquid crystal films whose director varies in three spatial dimensions. As an example, the GOA is applied to the calculation of light transmittance for the case of a liquid crystal cell which exhibits the homeotropic to multidomainlike transition (HMD cell). Properties of the GOA solution are explored, and comparison with the Jones calculus solution is also made. For variations on a smaller scale, where the Jones calculus breaks down, the GOA provides a fast, accurate method for calculating light transmittance. The results of light transmittance calculations for the HMD cell based on the director patterns provided by two methods, direct computer calculation and a previously developed simplified model, are in good agreement.

  19. A geometric approach for fault detection and isolation of stator short circuit failure in a single asynchronous machine

    KAUST Repository

    Khelouat, Samir

    2012-06-01

    This paper deals with the problem of detection and isolation of stator short-circuit failure in a single asynchronous machine using a geometric approach. After recalling the basis of the geometric approach for fault detection and isolation in nonlinear systems, we will study some structural properties which are fault detectability and isolation fault filter existence. We will then design filters for residual generation. We will consider two approaches: a two-filters structure and a single filter structure, both aiming at generating residuals which are sensitive to one fault and insensitive to the other faults. Some numerical tests will be presented to illustrate the efficiency of the method.

  20. A network approach to the geometric structure of shallow cloud fields

    Science.gov (United States)

    Glassmeier, F.; Feingold, G.

    2017-12-01

    The representation of shallow clouds and their radiative impact is one of the largest challenges for global climate models. While the bulk properties of cloud fields, including effects of organization, are a very active area of research, the potential of the geometric arrangement of cloud fields for the development of new parameterizations has hardly been explored. Self-organized patterns are particularly evident in the cellular structure of Stratocumulus (Sc) clouds so readily visible in satellite imagery. Inspired by similar patterns in biology and physics, we approach pattern formation in Sc fields from the perspective of natural cellular networks. Our network analysis is based on large-eddy simulations of open- and closed-cell Sc cases. We find the network structure to be neither random nor characteristic to natural convection. It is independent of macroscopic cloud fields properties like the Sc regime (open vs closed) and its typical length scale (boundary layer height). The latter is a consequence of entropy maximization (Lewis's Law with parameter 0.16). The cellular pattern is on average hexagonal, where non-6 sided cells occur according to a neighbor-number distribution variance of about 2. Reflecting the continuously renewing dynamics of Sc fields, large (many-sided) cells tend to neighbor small (few-sided) cells (Aboav-Weaire Law with parameter 0.9). These macroscopic network properties emerge independent of the Sc regime because the different processes governing the evolution of closed as compared to open cells correspond to topologically equivalent network dynamics. By developing a heuristic model, we show that open and closed cell dynamics can both be mimicked by versions of cell division and cell disappearance and are biased towards the expansion of smaller cells. This model offers for the first time a fundamental and universal explanation for the geometric pattern of Sc clouds. It may contribute to the development of advanced Sc parameterizations

  1. The strong coupling constant: its theoretical derivation from a geometric approach to hadron structure

    International Nuclear Information System (INIS)

    Recami, E.; Tonin-Zanchin, V.

    1991-01-01

    Since more than a decade, a bi-scale, unified approach to strong and gravitational interactions has been proposed, that uses the geometrical methods of general relativity, and yielded results similar to strong gravity theory's. We fix our attention, in this note, on hadron structure, and show that also the strong interaction strength α s, ordinarily called the (perturbative) coupling-constant square, can be evaluated within our theory, and found to decrease (increase) as the distance r decreases (increases). This yields both the confinement of the hadron constituents for large values of r, and their asymptotic freedom [for small values of r inside the hadron]: in qualitative agreement with the experimental evidence. In other words, our approach leads us, on a purely theoretical ground, to a dependence of α s on r which had been previously found only on phenomenological and heuristical grounds. We expect the above agreement to be also quantitative, on the basis of a few checks performed in this paper, and of further work of ours about calculating meson mass-spectra. (author)

  2. A differential-geometric approach to generalized linear models with grouped predictors

    NARCIS (Netherlands)

    Augugliaro, Luigi; Mineo, Angelo M.; Wit, Ernst C.

    We propose an extension of the differential-geometric least angle regression method to perform sparse group inference in a generalized linear model. An efficient algorithm is proposed to compute the solution curve. The proposed group differential-geometric least angle regression method has important

  3. Geometric metamorphosis.

    Science.gov (United States)

    Niethammer, Marc; Hart, Gabriel L; Pace, Danielle F; Vespa, Paul M; Irimia, Andrei; Van Horn, John D; Aylward, Stephen R

    2011-01-01

    Standard image registration methods do not account for changes in image appearance. Hence, metamorphosis approaches have been developed which jointly estimate a space deformation and a change in image appearance to construct a spatio-temporal trajectory smoothly transforming a source to a target image. For standard metamorphosis, geometric changes are not explicitly modeled. We propose a geometric metamorphosis formulation, which explains changes in image appearance by a global deformation, a deformation of a geometric model, and an image composition model. This work is motivated by the clinical challenge of predicting the long-term effects of traumatic brain injuries based on time-series images. This work is also applicable to the quantification of tumor progression (e.g., estimating its infiltrating and displacing components) and predicting chronic blood perfusion changes after stroke. We demonstrate the utility of the method using simulated data as well as scans from a clinical traumatic brain injury patient.

  4. Assessing population-level morphometric variation of the Mountain Mullet Agonostomus monticola (Teleostei: Mugilidae across its Middle American distribution

    Directory of Open Access Journals (Sweden)

    Bertha P. Díaz-Murillo

    2017-12-01

    Full Text Available ABSTRACT Population-level morphometric variation of the Mountain Mullet (Agonostomus monticola was assessed in 419 adult specimens from 25 sample sites (river basins across its Middle American distribution (Pacific and Atlantic-Caribbean drainages. This analysis was based on 36 standardized linear measurements and 19 landmarks on geometric morphometrics approach. Discriminant function analysis (DFA revealed 19 linear morphological characters with significant variation among groups. Geometrically, the most notable changes were associated to the curvature of the frontal region of the head, the anterior and posterior insertion of the first dorsal and anal fins. The resulting grouping based on the DFA and geometric morphometrics techniques (Pacific-A, Pacific-B and NE México-Caribbean were similar to those previously recovered by genetic techniques, where the Pacific-B (Ayuquila river basin was the most different group. Our results provide morphological evidence for considering Agonostomus monticola as a complex of evolutionary entities, represented by two forms in the Pacific Ocean and another in the Atlantic Ocean.

  5. SIMULATION EXPERIMENT ON LANDING SITE SELECTION USING A SIMPLE GEOMETRIC APPROACH

    Directory of Open Access Journals (Sweden)

    W. Zhao

    2017-07-01

    Full Text Available Safe landing is an important part of the planetary exploration mission. Even fine scale terrain hazards (such as rocks, small craters, steep slopes, which would not be accurately detected from orbital reconnaissance could also pose a serious risk on planetary lander or rover and scientific instruments on-board it. In this paper, a simple geometric approach on planetary landing hazard detection and safe landing site selection is proposed. In order to achieve full implementation of this algorithm, two easy-to-compute metrics are presented for extracting the terrain slope and roughness information. Unlike conventional methods which must do the robust plane fitting and elevation interpolation for DEM generation, in this work, hazards is identified through the processing directly on LiDAR point cloud. For safe landing site selection, a Generalized Voronoi Diagram is constructed. Based on the idea of maximum empty circle, the safest landing site can be determined. In this algorithm, hazards are treated as general polygons, without special simplification (e.g. regarding hazards as discrete circles or ellipses. So using the aforementioned method to process hazards is more conforming to the real planetary exploration scenario. For validating the approach mentioned above, a simulated planetary terrain model was constructed using volcanic ash with rocks in indoor environment. A commercial laser scanner mounted on a rail was used to scan the terrain surface at different hanging positions. The results demonstrate that fairly hazard detection capability and reasonable site selection was obtained compared with conventional method, yet less computational time and less memory usage was consumed. Hence, it is a feasible candidate approach for future precision landing selection on planetary surface.

  6. Simulation Experiment on Landing Site Selection Using a Simple Geometric Approach

    Science.gov (United States)

    Zhao, W.; Tong, X.; Xie, H.; Jin, Y.; Liu, S.; Wu, D.; Liu, X.; Guo, L.; Zhou, Q.

    2017-07-01

    Safe landing is an important part of the planetary exploration mission. Even fine scale terrain hazards (such as rocks, small craters, steep slopes, which would not be accurately detected from orbital reconnaissance) could also pose a serious risk on planetary lander or rover and scientific instruments on-board it. In this paper, a simple geometric approach on planetary landing hazard detection and safe landing site selection is proposed. In order to achieve full implementation of this algorithm, two easy-to-compute metrics are presented for extracting the terrain slope and roughness information. Unlike conventional methods which must do the robust plane fitting and elevation interpolation for DEM generation, in this work, hazards is identified through the processing directly on LiDAR point cloud. For safe landing site selection, a Generalized Voronoi Diagram is constructed. Based on the idea of maximum empty circle, the safest landing site can be determined. In this algorithm, hazards are treated as general polygons, without special simplification (e.g. regarding hazards as discrete circles or ellipses). So using the aforementioned method to process hazards is more conforming to the real planetary exploration scenario. For validating the approach mentioned above, a simulated planetary terrain model was constructed using volcanic ash with rocks in indoor environment. A commercial laser scanner mounted on a rail was used to scan the terrain surface at different hanging positions. The results demonstrate that fairly hazard detection capability and reasonable site selection was obtained compared with conventional method, yet less computational time and less memory usage was consumed. Hence, it is a feasible candidate approach for future precision landing selection on planetary surface.

  7. Teaching Mathematical Functions Using Geometric Functions Approach and Its Effect on Ninth Grade Students' Motivation

    Science.gov (United States)

    Akçakin, Veysel

    2018-01-01

    The purpose of this study is to investigate the effects of using geometric functions approach on 9th grade students' motivation levels toward mathematics in functions unit. Participants of this study were 87 students who were ongoing in the first year of high school in Turkey. In this research, pretest and posttest control group quasiexperimental…

  8. A Geometric Dictionary Learning Based Approach for Fluorescence Spectroscopy Image Fusion

    Directory of Open Access Journals (Sweden)

    Zhiqin Zhu

    2017-02-01

    Full Text Available In recent years, sparse representation approaches have been integrated into multi-focus image fusion methods. The fused images of sparse-representation-based image fusion methods show great performance. Constructing an informative dictionary is a key step for sparsity-based image fusion method. In order to ensure sufficient number of useful bases for sparse representation in the process of informative dictionary construction, image patches from all source images are classified into different groups based on geometric similarities. The key information of each image-patch group is extracted by principle component analysis (PCA to build dictionary. According to the constructed dictionary, image patches are converted to sparse coefficients by simultaneous orthogonal matching pursuit (SOMP algorithm for representing the source multi-focus images. At last the sparse coefficients are fused by Max-L1 fusion rule and inverted to fused image. Due to the limitation of microscope, the fluorescence image cannot be fully focused. The proposed multi-focus image fusion solution is applied to fluorescence imaging area for generating all-in-focus images. The comparison experimentation results confirm the feasibility and effectiveness of the proposed multi-focus image fusion solution.

  9. Optimal Route Searching with Multiple Dynamical Constraints—A Geometric Algebra Approach

    Directory of Open Access Journals (Sweden)

    Dongshuang Li

    2018-05-01

    Full Text Available The process of searching for a dynamic constrained optimal path has received increasing attention in traffic planning, evacuation, and personalized or collaborative traffic service. As most existing multiple constrained optimal path (MCOP methods cannot search for a path given various types of constraints that dynamically change during the search, few approaches for dynamic multiple constrained optimal path (DMCOP with type II dynamics are available for practical use. In this study, we develop a method to solve the DMCOP problem with type II dynamics based on the unification of various types of constraints under a geometric algebra (GA framework. In our method, the network topology and three different types of constraints are represented by using algebraic base coding. With a parameterized optimization of the MCOP algorithm based on a greedy search strategy under the generation-refinement paradigm, this algorithm is found to accurately support the discovery of optimal paths as the constraints of numerical values, nodes, and route structure types are dynamically added to the network. The algorithm was tested with simulated cases of optimal tourism route searches in China’s road networks with various combinations of constraints. The case study indicates that our algorithm can not only solve the DMCOP with different types of constraints but also use constraints to speed up the route filtering.

  10. Investigation of geometrical effects in the carbon allotropes manipulation based on AFM: multiscale approach

    Energy Technology Data Exchange (ETDEWEB)

    Korayem, M. H., E-mail: hkorayem@iust.ac.ir; Hefzabad, R. N.; Homayooni, A.; Aslani, H. [Iran University of Science and Technology, Robotic Research Laboratory, Center of Excellence in Experimental Solid Mechanics and Dynamics, School of Mechanical Engineering (Iran, Islamic Republic of)

    2017-01-15

    Carbon allotropes are used as nanocarriers for drug and cell delivery. To obtain an accurate result in the nanoscale, it is important to use a precise model. In this paper, a multiscale approach is presented to investigate the manipulation process of carbon allotropes based on atomic force microscopy (AFM). For this purpose, the AFM setup is separated into two parts with different sizes as macro field (MF) and nano field (NF). Using Kirchhoff’s plate model, the cantilever (the main part of MF) is modeled. The molecular dynamics method is applied to model the NF part, and then the MF and NF are coupled with the multiscale algorithm. With this model, by considering the effect of size and shape, the manipulation of carbon allotropes is carried out. The manipulations of armchair CNTs and fullerenes are performed to study the diameter changing effects. The result shows that the manipulation and friction force increases by increasing the diameter. The result of the indentation depth for the armchair CNTs indicates that decreasing the diameter causes the indentation depth to reduce. Moreover, the manipulations of four kinds of carbon allotropes with the same number of atoms have been studied to investigate the geometrical effects. The shapes of these nanoparticles change from sphere to cylinder. The results illustrate that the manipulation and the friction force decrease as the nanoparticle shape varies from sphere to cylinder. The Von-Mises results demonstrate that by changing the nanoparticle shape from the spherical to the cylindrical form, the stress increases, although the manipulation force reduces.

  11. Palatini approach to Born-Infeld-Einstein theory and a geometric description of electrodynamics

    International Nuclear Information System (INIS)

    Vollick, Dan N.

    2004-01-01

    The field equations associated with the Born-Infeld-Einstein action are derived using the Palatini variational technique. In this approach the metric and connection are varied independently and the Ricci tensor is generally not symmetric. For sufficiently small curvatures the resulting field equations can be divided into two sets. One set, involving the antisymmetric part of the Ricci tensor R or μν , consists of the field equation for a massive vector field. The other set consists of the Einstein field equations with an energy momentum tensor for the vector field plus additional corrections. In a vacuum with R or μν =0 the field equations are shown to be the usual Einstein vacuum equations. This extends the universality of the vacuum Einstein equations, discussed by Ferraris et al., to the Born-Infeld-Einstein action. In the simplest version of the theory there is a single coupling constant and by requiring that the Einstein field equations hold to a good approximation in neutron stars it is shown that mass of the vector field exceeds the lower bound on the mass of the photon. Thus, in this case the vector field cannot represent the electromagnetic field and would describe a new geometrical field. In a more general version in which the symmetric and antisymmetric parts of the Ricci tensor have different coupling constants it is possible to satisfy all of the observational constraints if the antisymmetric coupling is much larger than the symmetric coupling. In this case the antisymmetric part of the Ricci tensor can describe the electromagnetic field

  12. Investigation of geometrical effects in the carbon allotropes manipulation based on AFM: multiscale approach

    International Nuclear Information System (INIS)

    Korayem, M. H.; Hefzabad, R. N.; Homayooni, A.; Aslani, H.

    2017-01-01

    Carbon allotropes are used as nanocarriers for drug and cell delivery. To obtain an accurate result in the nanoscale, it is important to use a precise model. In this paper, a multiscale approach is presented to investigate the manipulation process of carbon allotropes based on atomic force microscopy (AFM). For this purpose, the AFM setup is separated into two parts with different sizes as macro field (MF) and nano field (NF). Using Kirchhoff’s plate model, the cantilever (the main part of MF) is modeled. The molecular dynamics method is applied to model the NF part, and then the MF and NF are coupled with the multiscale algorithm. With this model, by considering the effect of size and shape, the manipulation of carbon allotropes is carried out. The manipulations of armchair CNTs and fullerenes are performed to study the diameter changing effects. The result shows that the manipulation and friction force increases by increasing the diameter. The result of the indentation depth for the armchair CNTs indicates that decreasing the diameter causes the indentation depth to reduce. Moreover, the manipulations of four kinds of carbon allotropes with the same number of atoms have been studied to investigate the geometrical effects. The shapes of these nanoparticles change from sphere to cylinder. The results illustrate that the manipulation and the friction force decrease as the nanoparticle shape varies from sphere to cylinder. The Von-Mises results demonstrate that by changing the nanoparticle shape from the spherical to the cylindrical form, the stress increases, although the manipulation force reduces.

  13. A simple geometrical approach to particle production in collisions with nuclei

    International Nuclear Information System (INIS)

    Dias de Deus, J.

    1975-11-01

    It is argued that hadron collisions with nuclei are similar to hadron-hadron collisions, having similar properties for the impact parameter distributions and the leading particle spectra. The relevant existing high energy data, including the universality of multiplicity distributions and the possibility of geometrical scaling in reactions with nuclei, are easily understood in the framework of geometrical models by extending to p-nucleus collisions what was learnt about impact parameter and leading particles in p-p collisions. The question of forward-backward correlations and photo and electroproduction are briefly discussed. (author)

  14. Asymptotic approach to the pricing of geometric asian options under the CEV model

    International Nuclear Information System (INIS)

    Lee, Min-Ku

    2016-01-01

    This paper studies the pricing of Asian options whose payoffs depend on the average value of an underlying asset during the period to a maturity. Since the Asian option is not so sensitive to the value of underlying asset, the possibility of manipulation is relatively small than the other options such as European vanilla and barrier options. We derive the pricing formula of geometric Asian options under the constant elasticity of variance (CEV) model that is one of local volatility models, and investigate the implication of the CEV model for geometric Asian options.

  15. Morfometría geométrica alar para la identificación de Chrysomya albiceps y C. megacephala (Diptera: Calliphoridae de Venezuela Geometric wing morphometrics for Chrysomya albiceps and C. megacephala identification (Diptera: Calliphoridae from Venezuela

    Directory of Open Access Journals (Sweden)

    Marianela Vásquez

    2012-09-01

    Full Text Available Calliphoridae es una de las familias con el mayor número de especies de importancia forense, donde sus fases inmaduras se alimentan y desarrollan sobre material en descomposición. En Venezuela, son pocos los estudios en este taxon, sin embargo se ha reportado la dominancia del género Chrysomya sobre los otros dípteros. El objetivo fue analizar la variación morfométrica en la arquitectura alar, como herramienta de apoyo a la identificación de dípteros de importancia forense. Se fotografiaron 168 alas de C. albiceps (n=111 y C. megacephala (n=57 y se registraron configuraciones de coordenadas (x, y, se alinearon mediante Análisis Generalizado de Procrustes. Se efectuaron Análisis de Componentes Principales y comparaciones pareadas entre distancia parcial de Procrustes. El análisis estadístico de varianza encontró diferencias en el tamaño isométrico del ala (Kruskal-Wallis. El ACP mostró la separación de ambas especies, y la prueba de configuraciones determinó diferencias significativas (F Goodall. Las principales diferencias entre ambas especies se encontraron en: ruptura de la subcosta, unión de R2+3 con el borde del ala, unión dm-cu, y unión de Cu con dm-cu, lo que confirma que la morfometría alar es una herramienta idónea en la discriminación de especies de Calliphoridae.Calliphoridae is one of the families with the greatest number of species with forensic importance, which immature stages feed and develop on decaying material. in Venezuela, there are few studies on this taxon reporting the dominance of Chrysomya over other carrion flies. The goal of this study was to analyze the variations on wing morphometrics, to support the identification of two forensic flies. For this we photographed a total of 168 wings from C. albiceps (n=111 and C. megacephala (n=57. Landmark coordinate (x, y configurations were registered and aligned by Generalized Procrustes Analysis. Principal Component Analysis and shape significance test

  16. Right-invertibility for a class of nonlinear control systems: A geometric approach

    NARCIS (Netherlands)

    Nijmeijer, Henk

    1986-01-01

    In recent years it has become evident that various synthesis problems known from linear system theory can also be solved for nonlinear control systems by using differential geometric methods. The purpose of this paper is to use this mathematical framework for giving a preliminary account on the

  17. Combined Geometric and Neural Network Approach to Generic Fault Diagnosis in Satellite Actuators and Sensors

    DEFF Research Database (Denmark)

    Baldi, P.; Blanke, Mogens; Castaldi, P.

    2016-01-01

    This paper presents a novel scheme for diagnosis of faults affecting the sensors measuring the satellite attitude, body angular velocity and flywheel spin rates as well as defects related to the control torques provided by satellite reaction wheels. A nonlinear geometric design is used to avoid t...

  18. Outline-based morphometrics, an overlooked method in arthropod studies?

    Science.gov (United States)

    Dujardin, Jean-Pierre; Kaba, D; Solano, P; Dupraz, M; McCoy, K D; Jaramillo-O, N

    2014-12-01

    Modern methods allow a geometric representation of forms, separating size and shape. In entomology, as well as in many other fields involving arthropod studies, shape variation has proved useful for species identification and population characterization. In medical entomology, it has been applied to very specific questions such as population structure, reinfestation of insecticide-treated areas and cryptic species recognition. For shape comparisons, great importance is given to the quality of landmarks in terms of comparability. Two conceptually and statistically separate approaches are: (i) landmark-based morphometrics, based on the relative position of a few anatomical "true" or "traditional" landmarks, and (ii) outline-based morphometrics, which captures the contour of forms through a sequence of close "pseudo-landmarks". Most of the studies on insects of medical, veterinary or economic importance make use of the landmark approach. The present survey makes a case for the outline method, here based on elliptic Fourier analysis. The collection of pseudo-landmarks may require the manual digitization of many points and, for this reason, might appear less attractive. It, however, has the ability to compare homologous organs or structures having no landmarks at all. This strength offers the possibility to study a wider range of anatomical structures and thus, a larger range of arthropods. We present a few examples highlighting its interest for separating close or cryptic species, or characterizing conspecific geographic populations, in a series of different vector organisms. In this simple application, i.e. the recognition of close or cryptic forms, the outline approach provided similar scores as those obtained by the landmark-based approach. Copyright © 2014 Elsevier B.V. All rights reserved.

  19. Reviewing the upper Pleistocene human footprints from the 'Sala dei Misteri' in the Grotta della Bàsura (Toirano, northern Italy) cave: An integrated morphometric and morpho-classificatory approach

    Science.gov (United States)

    Paolo Citton; Romano, Marco; Salvador, Isabella; Avanzini, Marco

    2017-08-01

    About thirty human footprints made approximately 12,000 years B.P. inside the 'Sala dei Misteri' Cave of Básura near Toirano, Liguria, northern Italy, were studied by standard ichnological analysis. Eleven of the best-preserved tracks were examined further using morpho-classificatory and morphometric approaches, in order to estimate the minimum number of trackmakers; biometric measurements were also used to tentatively determine their physical characteristics (e.g., height and age). Results indicate at least three different producers, two youths and the third of tender age. Analysis of the data demonstrate the power of 3D, of landmark-based morphometrics, and the utility of methods of forensic anthropology in the determination of human footprints. The study of the number of trackmakers using the principal component analysis (PCA) on 'multi-trampling' surfaces could represent a model in the ichnological study of cave sites.

  20. Cambios morfológicos en la mandíbula durante la ontogenia: un aporte desde la Histología y la Morfometría Geométrica / Morphological changes in the human mandible during ontogeny: insights from Histological and Geometric Morphometric Analyses

    Directory of Open Access Journals (Sweden)

    Natalia Brachetta Aporta

    2015-12-01

    Full Text Available El análisis de la morfología craneofacial durante la ontogenia es una línea central en los estudios evolutivos, del desarrollo y biomédicos. El complejo craneofacial ha sido estudiado desde dos perspectivas: el análisis de la forma y el tamaño mediante morfometría lineal y geométrica, y el estudio de los procesos subyacentes mediante el análisis histológico de la superficie del hueso. El objetivo de este trabajo es integrar estas dos líneas para analizar los cambios morfológicos de la mandíbula y ofrecer un modelo de crecimiento que dé cuenta de los mismos. Se analizó una muestra de mandíbulas humanas de individuos subadultos y adultos de procedencia europea. La variación en forma fue registrada a partir de coordenadas de landmarks y análisis de regresión sobre el tamaño. Los campos de formación y reabsorción ósea fueron identificados sobre réplicas de alta resolución de la superficie ósea. Los resultados indican que la variación a escala anatómica descrita mediante técnicas morfométricas fue, en líneas generales, concordante con la inferida a partir de la distribución de las áreas de modelado óseo. Sin embargo, cambios importantes como los movimientos de rotación de la mandíbula con el crecimiento sólo pudieron detectarse a través del análisis morfométrico. Asimismo, ambos tipos de datos mostraron diferencias en las direcciones de cambio inferidas para la sínfisis mandibular. Este trabajo señala la importancia de integrar datos histológicos y morfométricos para comprender los patrones y procesos de cambio morfológico en la ontogenia. PALABRAS CLAVE crecimiento; modelado óseo; forma y tamaño   The analysis of craniofacial morphology during ontogeny has a central role in evolutionary, developmental, and biomedical studies. The craniofacial complex has been studied from two main perspectives: the analysis of its shape and size by means of linear and geometric morphometrics, and the study of

  1. Scaling mimesis: Morphometric and ecomorphological similarities in three sympatric plant-mimetic fish of the family Carangidae (Teleostei).

    Science.gov (United States)

    Queiroz, Alexya Cunha de; Vallinoto, Marcelo; Sakai, Yoichi; Giarrizzo, Tommaso; Barros, Breno

    2018-01-01

    The mimetic juveniles of a number of carangid fish species resemble plant parts floating near the water surface, such as leaves, seeds and other plant debris. The present study is the first to verify the morphological similarities and ecomorphological relationships between three carangids (Oligoplites saurus, Oligoplites palometa and Trachinotus falcatus) and their associated plant models. Behavioral observations were conducted in the estuary of Curuçá River, in northeastern Pará (Brazil) between August 2015 and July 2016. Individual fishes and associated floating objects (models) were sampled for comparative analysis using both geometric and morphometric approaches. While the mimetic fish and their models retain their own distinct, intrinsic morphological features, a high degree of morphological similarity was found between each fish species and its model. The morphometric analyses revealed a general tendency of isometric development in all three fish species, probably related to their pelagic habitats, during all ontogenetic stages.

  2. The geometric approach to sets of ordinary differential equations and Hamiltonian dynamics

    Science.gov (United States)

    Estabrook, F. B.; Wahlquist, H. D.

    1975-01-01

    The calculus of differential forms is used to discuss the local integration theory of a general set of autonomous first order ordinary differential equations. Geometrically, such a set is a vector field V in the space of dependent variables. Integration consists of seeking associated geometric structures invariant along V: scalar fields, forms, vectors, and integrals over subspaces. It is shown that to any field V can be associated a Hamiltonian structure of forms if, when dealing with an odd number of dependent variables, an arbitrary equation of constraint is also added. Families of integral invariants are an immediate consequence. Poisson brackets are isomorphic to Lie products of associated CT-generating vector fields. Hamilton's variational principle follows from the fact that the maximal regular integral manifolds of a closed set of forms must include the characteristics of the set.

  3. Lie symmetry analysis and reduction for exact solution of (2+1)-dimensional Bogoyavlensky-Konopelchenko equation by geometric approach

    Science.gov (United States)

    Ray, S. Saha

    2018-04-01

    In this paper, the symmetry analysis and similarity reduction of the (2+1)-dimensional Bogoyavlensky-Konopelchenko (B-K) equation are investigated by means of the geometric approach of an invariance group, which is equivalent to the classical Lie symmetry method. Using the extended Harrison and Estabrook’s differential forms approach, the infinitesimal generators for (2+1)-dimensional B-K equation are obtained. Firstly, the vector field associated with the Lie group of transformation is derived. Then the symmetry reduction and the corresponding explicit exact solution of (2+1)-dimensional B-K equation is obtained.

  4. Geographic phenetic variation of two eastern-Mediterranean non-commensal mouse species, Mus macedonicus and M. cypriacus (Rodentia: Muridae) based on traditional and geometric approaches to morphometrics

    Czech Academy of Sciences Publication Activity Database

    Macholán, Miloš; Mikula, Ondřej; Vohralík, V.

    2008-01-01

    Roč. 247, - (2008), s. 67-80 ISSN 0044-5231 R&D Projects: GA AV ČR IAA6045307; GA ČR GA206/06/0707 Grant - others:GA ČR(CZ) GA206/05/2334 Institutional research plan: CEZ:AV0Z50450515 Keywords : Mus macedonicus * Mus cypriacus * phenotypic variation Subject RIV: EG - Zoology Impact factor: 1.319, year: 2008

  5. The effects of spatial autoregressive dependencies on inference in ordinary least squares: a geometric approach

    Science.gov (United States)

    Smith, Tony E.; Lee, Ka Lok

    2012-01-01

    There is a common belief that the presence of residual spatial autocorrelation in ordinary least squares (OLS) regression leads to inflated significance levels in beta coefficients and, in particular, inflated levels relative to the more efficient spatial error model (SEM). However, our simulations show that this is not always the case. Hence, the purpose of this paper is to examine this question from a geometric viewpoint. The key idea is to characterize the OLS test statistic in terms of angle cosines and examine the geometric implications of this characterization. Our first result is to show that if the explanatory variables in the regression exhibit no spatial autocorrelation, then the distribution of test statistics for individual beta coefficients in OLS is independent of any spatial autocorrelation in the error term. Hence, inferences about betas exhibit all the optimality properties of the classic uncorrelated error case. However, a second more important series of results show that if spatial autocorrelation is present in both the dependent and explanatory variables, then the conventional wisdom is correct. In particular, even when an explanatory variable is statistically independent of the dependent variable, such joint spatial dependencies tend to produce "spurious correlation" that results in over-rejection of the null hypothesis. The underlying geometric nature of this problem is clarified by illustrative examples. The paper concludes with a brief discussion of some possible remedies for this problem.

  6. Quantitative diagnosis of breast tumors by morphometric classification of microenvironmental myoepithelial cells using a machine learning approach.

    Science.gov (United States)

    Yamamoto, Yoichiro; Saito, Akira; Tateishi, Ayako; Shimojo, Hisashi; Kanno, Hiroyuki; Tsuchiya, Shinichi; Ito, Ken-Ichi; Cosatto, Eric; Graf, Hans Peter; Moraleda, Rodrigo R; Eils, Roland; Grabe, Niels

    2017-04-25

    Machine learning systems have recently received increased attention for their broad applications in several fields. In this study, we show for the first time that histological types of breast tumors can be classified using subtle morphological differences of microenvironmental myoepithelial cell nuclei without any direct information about neoplastic tumor cells. We quantitatively measured 11661 nuclei on the four histological types: normal cases, usual ductal hyperplasia and low/high grade ductal carcinoma in situ (DCIS). Using a machine learning system, we succeeded in classifying the four histological types with 90.9% accuracy. Electron microscopy observations suggested that the activity of typical myoepithelial cells in DCIS was lowered. Through these observations as well as meta-analytic database analyses, we developed a paracrine cross-talk-based biological mechanism of DCIS progressing to invasive cancer. Our observations support novel approaches in clinical computational diagnostics as well as in therapy development against progression.

  7. Voxel-based morphometric analysis in hypothyroidism using diffeomorphic anatomic registration via an exponentiated lie algebra algorithm approach.

    Science.gov (United States)

    Singh, S; Modi, S; Bagga, D; Kaur, P; Shankar, L R; Khushu, S

    2013-03-01

    The present study aimed to investigate whether brain morphological differences exist between adult hypothyroid subjects and age-matched controls using voxel-based morphometry (VBM) with diffeomorphic anatomic registration via an exponentiated lie algebra algorithm (DARTEL) approach. High-resolution structural magnetic resonance images were taken in ten healthy controls and ten hypothyroid subjects. The analysis was conducted using statistical parametric mapping. The VBM study revealed a reduction in grey matter volume in the left postcentral gyrus and cerebellum of hypothyroid subjects compared to controls. A significant reduction in white matter volume was also found in the cerebellum, right inferior and middle frontal gyrus, right precentral gyrus, right inferior occipital gyrus and right temporal gyrus of hypothyroid patients compared to healthy controls. Moreover, no meaningful cluster for greater grey or white matter volume was obtained in hypothyroid subjects compared to controls. Our study is the first VBM study of hypothyroidism in an adult population and suggests that, compared to controls, this disorder is associated with differences in brain morphology in areas corresponding to known functional deficits in attention, language, motor speed, visuospatial processing and memory in hypothyroidism. © 2012 British Society for Neuroendocrinology.

  8. A toric varieties approach to geometrical structure of multi partite states

    International Nuclear Information System (INIS)

    Heydari, Hoshang

    2010-01-01

    We investigate the geometrical structures of multipartite states based on construction of toric varieties. In particular, we describe pure quantum systems in terms of affine toric varieties and projective embedding of these varieties in complex projective spaces. We show that a quantum system can be corresponds to a toric variety of a fan which is constructed by gluing together affine toric varieties of polytopes. Moreover, we show that the projective toric varieties are the spaces of separable multipartite quantum states. The construction is a generalization of the complex multi-projective Segre variety. Our construction suggests a systematic way of looking at the structures of multipartite quantum systems.

  9. Joint pricing and production management: a geometric programming approach with consideration of cubic production cost function

    Science.gov (United States)

    Sadjadi, Seyed Jafar; Hamidi Hesarsorkh, Aghil; Mohammadi, Mehdi; Bonyadi Naeini, Ali

    2015-06-01

    Coordination and harmony between different departments of a company can be an important factor in achieving competitive advantage if the company corrects alignment between strategies of different departments. This paper presents an integrated decision model based on recent advances of geometric programming technique. The demand of a product considers as a power function of factors such as product's price, marketing expenditures, and consumer service expenditures. Furthermore, production cost considers as a cubic power function of outputs. The model will be solved by recent advances in convex optimization tools. Finally, the solution procedure is illustrated by numerical example.

  10. Wall-corner classification using sonar: a new approach based on geometric features.

    Science.gov (United States)

    Martínez, Milagros; Benet, Ginés

    2010-01-01

    Ultrasonic signals coming from rotary sonar sensors in a robot gives us several features about the environment. This enables us to locate and classify the objects in the scenario of the robot. Each object and reflector produces a series of peaks in the amplitude of the signal. The radial and angular position of the sonar sensor gives information about location and their amplitudes offer information about the nature of the surface. Early works showed that the amplitude can be modeled and used to classify objects with very good results at short distances-80% average success in classifying both walls and corners at distances less than 1.5 m. In this paper, a new set of geometric features derived from the amplitude analysis of the echo is presented. These features constitute a set of characteristics that can be used to improve the results of classification at distances from 1.5 m to 4 m. Also, a comparative study on classification algorithms widely used in pattern recognition techniques has been carried out for sensor distances ranging between 0.5 to 4 m, and with incidence angles ranging between 20° to 70°. Experimental results show an enhancement on the success in classification rates when these geometric features are considered.

  11. A Geometric Approach to CP Violation: Applications to the MCPMFV SUSY Model

    CERN Document Server

    Ellis, John; Pilaftsis, Apostolos

    2010-01-01

    We analyze the constraints imposed by experimental upper limits on electric dipole moments (EDMs) within the Maximally CP- and Minimally Flavour-Violating (MCPMFV) version of the MSSM. Since the MCPMFV scenario has 6 non-standard CP-violating phases, in addition to the CP-odd QCD vacuum phase \\theta_QCD, cancellations may occur among the CP-violating contributions to the three measured EDMs, those of the Thallium, neutron and Mercury, leaving open the possibility of relatively large values of the other CP-violating observables. We develop a novel geometric method that uses the small-phase approximation as a starting point, takes the existing EDM constraints into account, and enables us to find maximal values of other CP-violating observables, such as the EDMs of the Deuteron and muon, the CP-violating asymmetry in b --> s \\gamma decay, and the B_s mixing phase. We apply this geometric method to provide upper limits on these observables within specific benchmark supersymmetric scenarios, including extensions t...

  12. Geometric approach to the design of an imaging probe to evaluate the iridocorneal angle structures

    Science.gov (United States)

    Hong, Xun Jie Jeesmond; V. K., Shinoj; Murukeshan, V. M.; Baskaran, M.; Aung, Tin

    2017-06-01

    Photographic imaging methods allow the tracking of anatomical changes in the iridocorneal angle structures and the monitoring of treatment responses overtime. In this work, we aim to design an imaging probe to evaluate the iridocorneal angle structures using geometrical optics. We first perform an analytical analysis on light propagation from the anterior chamber of the eye to the exterior medium using Snell's law. This is followed by adopting a strategy to achieve uniform near field irradiance, by simplifying the complex non-rotational symmetric irradiance distribution of LEDs tilted at an angle. The optimization is based on the geometric design considerations of an angled circular ring array of 4 LEDs (or a 2 × 2 square LED array). The design equation give insights on variable parameters such as the illumination angle of the LEDs, ring array radius, viewing angle of the LEDs, and the working distance. A micro color CCD video camera that has sufficient resolution to resolve the iridocorneal angle structures at the required working distance is then chosen. The proposed design aspects fulfil the safety requirements recommended by the International Commission on Non-ionizing Radiation Protection.

  13. Simple and practical approach for computing the ray Hessian matrix in geometrical optics.

    Science.gov (United States)

    Lin, Psang Dain

    2018-02-01

    A method is proposed for simplifying the computation of the ray Hessian matrix in geometrical optics by replacing the angular variables in the system variable vector with their equivalent cosine and sine functions. The variable vector of a boundary surface is similarly defined in such a way as to exclude any angular variables. It is shown that the proposed formulations reduce the computation time of the Hessian matrix by around 10 times compared to the previous method reported by the current group in Advanced Geometrical Optics (2016). Notably, the method proposed in this study involves only polynomial differentiation, i.e., trigonometric function calls are not required. As a consequence, the computation complexity is significantly reduced. Five illustrative examples are given. The first three examples show that the proposed method is applicable to the determination of the Hessian matrix for any pose matrix, irrespective of the order in which the rotation and translation motions are specified. The last two examples demonstrate the use of the proposed Hessian matrix in determining the axial and lateral chromatic aberrations of a typical optical system.

  14. Morphometric Identification of Queens, Workers and Intermediates in In Vitro Reared Honey Bees (Apis mellifera).

    Science.gov (United States)

    De Souza, Daiana A; Wang, Ying; Kaftanoglu, Osman; De Jong, David; Amdam, Gro V; Gonçalves, Lionel S; Francoy, Tiago M

    2015-01-01

    In vitro rearing is an important and useful tool for honey bee (Apis mellifera L.) studies. However, it often results in intercastes between queens and workers, which are normally are not seen in hive-reared bees, except when larvae older than three days are grafted for queen rearing. Morphological classification (queen versus worker or intercastes) of bees produced by this method can be subjective and generally depends on size differences. Here, we propose an alternative method for caste classification of female honey bees reared in vitro, based on weight at emergence, ovariole number, spermatheca size and size and shape, and features of the head, mandible and basitarsus. Morphological measurements were made with both traditional morphometric and geometric morphometrics techniques. The classifications were performed by principal component analysis, using naturally developed queens and workers as controls. First, the analysis included all the characters. Subsequently, a new analysis was made without the information about ovariole number and spermatheca size. Geometric morphometrics was less dependent on ovariole number and spermatheca information for caste and intercaste identification. This is useful, since acquiring information concerning these reproductive structures requires time-consuming dissection and they are not accessible when abdomens have been removed for molecular assays or in dried specimens. Additionally, geometric morphometrics divided intercastes into more discrete phenotype subsets. We conclude that morphometric geometrics are superior to traditional morphometrics techniques for identification and classification of honey bee castes and intermediates.

  15. A new geometrical approach to Nash equilibria organization in Eisert's quantum games

    International Nuclear Information System (INIS)

    Schneider, David

    2012-01-01

    We extend the periodic point-based method for Eisert's quantum games (Schneider 2011 J. Phys. A: Math. Theor. 44 095301) to games not previously analyzed. From the comparison of different cases, we observe that games sharing the same classical features (as for instance the symmetrized Battle of the Sexes and the Chicken game) can have different characteristics after the quantization, and conversely, games with different classical behaviors (the Chicken game and the Prisoner's dilemma), are completely equivalent within Eisert's protocol. This fact is reflected in the structure of the map that the periodic point-procedure associates to the quantum game (from which the Nash equilibria are deduced). In order to understand how these unexpected outcomes are generated, we give a geometrical description of our observations in terms of bifurcation theory for maps. (paper)

  16. A new deconvolution approach to robust fluence for intensity modulation under geometrical uncertainty

    Science.gov (United States)

    Zhang, Pengcheng; De Crevoisier, Renaud; Simon, Antoine; Haigron, Pascal; Coatrieux, Jean-Louis; Li, Baosheng; Shu, Huazhong

    2013-09-01

    This work addresses random geometrical uncertainties that are intrinsically observed in radiation therapy by means of a new deconvolution method combining a series expansion and a Butterworth filter. The method efficiently suppresses high-frequency components by discarding the higher order terms of the series expansion and then filtering out deviations on the field edges. An additional approximation is made in order to set the fluence values outside the field to zero in the robust profiles. This method is compared to the deconvolution kernel method for a regular 2D fluence map, a real intensity-modulated radiation therapy field, and a prostate case. The results show that accuracy is improved while fulfilling clinical planning requirements.

  17. A new deconvolution approach to robust fluence for intensity modulation under geometrical uncertainty

    International Nuclear Information System (INIS)

    Zhang Pengcheng; Coatrieux, Jean-Louis; Shu Huazhong; De Crevoisier, Renaud; Simon, Antoine; Haigron, Pascal; Li Baosheng

    2013-01-01

    This work addresses random geometrical uncertainties that are intrinsically observed in radiation therapy by means of a new deconvolution method combining a series expansion and a Butterworth filter. The method efficiently suppresses high-frequency components by discarding the higher order terms of the series expansion and then filtering out deviations on the field edges. An additional approximation is made in order to set the fluence values outside the field to zero in the robust profiles. This method is compared to the deconvolution kernel method for a regular 2D fluence map, a real intensity-modulated radiation therapy field, and a prostate case. The results show that accuracy is improved while fulfilling clinical planning requirements. (paper)

  18. On open questions in the geometric approach to structural learning Bayesian nets

    Czech Academy of Sciences Publication Activity Database

    Studený, Milan; Vomlel, Jiří

    2011-01-01

    Roč. 52, č. 5 (2011), s. 627-640 ISSN 0888-613X. [Workshop on Uncertainty Processing WUPES'09 /8./. Liblice, 19.09.2009-23.09.2009] R&D Projects: GA MŠk(CZ) 1M0572; GA ČR GA201/08/0539; GA ČR GEICC/08/E010 Grant - others:GA MŠk(CZ) 2C06019 Institutional research plan: CEZ:AV0Z10750506 Keywords : structural learning Bayesian nets * standard imset * polytope * geometric neighborhood * differential imset Subject RIV: BA - General Mathematics Impact factor: 1.948, year: 2011 http://library.utia.cas.cz/separaty/2011/MTR/studeny-0358907. pdf

  19. Calculation of far-field scattering from nonspherical particles using a geometrical optics approach

    Science.gov (United States)

    Hovenac, Edward A.

    1991-01-01

    A numerical method was developed using geometrical optics to predict far-field optical scattering from particles that are symmetric about the optic axis. The diffractive component of scattering is calculated and combined with the reflective and refractive components to give the total scattering pattern. The phase terms of the scattered light are calculated as well. Verification of the method was achieved by assuming a spherical particle and comparing the results to Mie scattering theory. Agreement with the Mie theory was excellent in the forward-scattering direction. However, small-amplitude oscillations near the rainbow regions were not observed using the numerical method. Numerical data from spheroidal particles and hemispherical particles are also presented. The use of hemispherical particles as a calibration standard for intensity-type optical particle-sizing instruments is discussed.

  20. Micro-universes and strong black-roles: a purely geometric approach to elementary particles

    International Nuclear Information System (INIS)

    Recami, E.; Raciti, F.; Rodrigues Junior, W.A.; Zanchin, V.T.

    1993-09-01

    A panoramic view is presented of a proposed unified, bi-scale theory of gravitational and strong interactions [which is mathematically analogous to the last version of N. Rosen's bi-metric theory; and yields physical results similar to strong gravity's]. This theory, is purely geometrical in nature, adopting the methods of General Relativity for the description of hadron structure and strong interactions. In particular, hadrons are associated with strong black-holes, from the external point of view, and with micro-universes, from the internal point of view. Among the results herein presented, it should be mentioned the derivation: of confinement and asymptotic freedom from the hadron constituents; of the Yukawa behaviour for the potential at the static limit; of the strong coupling constant, and of mesonic mass spectra. (author)

  1. Intestinal morphometric and biomechanical changes during aging in rats

    DEFF Research Database (Denmark)

    Zhao, Jingbo; Gregersen, Hans

    2015-01-01

    Background and aim: Previously we demonstrated pronounced morphometric and biomechanical remodeling in the rat intestine during physiological growth up to 32 weeks of age. The aim of the present study is to study intestinal geometric and biomechanical changes in aging rats. Materials and methods...... in the circumferential direction. In conclusion pronounced morphometric and biomechanical remodeling occurred in the rat intestine during aging. The observed changes likely reflect the changes of the physiological function of the intestine during ageing, similar to other tissues where function, mechanical loading......: Twenty-four male Wistar rats, aged from 6 to 22 months, were used in the study. The body weight and the wet weight per length of duodenal and ileal segments were measured at the termination of experiment. Morphometric data were obtained by measuring the wall thickness and wall cross-sectional area...

  2. TU-H-206-01: An Automated Approach for Identifying Geometric Distortions in Gamma Cameras

    Energy Technology Data Exchange (ETDEWEB)

    Mann, S; Nelson, J [Clinical Imaging Physics Group and Carl E. Ravin Advanced Imaging Laboratories, Department of Radiology, Duke University Medical Center, Durham, North Carolina 27705 and Medical Physics Graduate Program, Duke University, Durham, North Carolina 27705 (United States); Samei, E [Clinical Imaging Physics Group and Carl E. Ravin Advanced Imaging Laboratories, Department of Radiology, Duke University Medical Center, Durham, North Carolina 27705 and Departments of Physics, Electrical and Computer Engineering, and Biomedical Engineering, and Medical Physics Graduate Program, Duke University, Durham, North Carolina 27705 (United States)

    2016-06-15

    Purpose: To develop a clinically-deployable, automated process for detecting artifacts in routine nuclear medicine (NM) quality assurance (QA) bar phantom images. Methods: An artifact detection algorithm was created to analyze bar phantom images as part of an ongoing QA program. A low noise, high resolution reference image was acquired from an x-ray of the bar phantom with a Philips Digital Diagnost system utilizing image stitching. NM bar images, acquired for 5 million counts over a 512×512 matrix, were registered to the template image by maximizing mutual information (MI). The MI index was used as an initial test for artifacts; low values indicate an overall presence of distortions regardless of their spatial location. Images with low MI scores were further analyzed for bar linearity, periodicity, alignment, and compression to locate differences with respect to the template. Findings from each test were spatially correlated and locations failing multiple tests were flagged as potential artifacts requiring additional visual analysis. The algorithm was initially deployed for GE Discovery 670 and Infinia Hawkeye gamma cameras. Results: The algorithm successfully identified clinically relevant artifacts from both systems previously unnoticed by technologists performing the QA. Average MI indices for artifact-free images are 0.55. Images with MI indices < 0.50 have shown 100% sensitivity and specificity for artifact detection when compared with a thorough visual analysis. Correlation of geometric tests confirms the ability to spatially locate the most likely image regions containing an artifact regardless of initial phantom orientation. Conclusion: The algorithm shows the potential to detect gamma camera artifacts that may be missed by routine technologist inspections. Detection and subsequent correction of artifacts ensures maximum image quality and may help to identify failing hardware before it impacts clinical workflow. Going forward, the algorithm is being

  3. Measurements of Atomic Rayleigh Scattering Cross-Sections: A New Approach Based on Solid Angle Approximation and Geometrical Efficiency

    Science.gov (United States)

    Rao, D. V.; Takeda, T.; Itai, Y.; Akatsuka, T.; Seltzer, S. M.; Hubbell, J. H.; Cesareo, R.; Brunetti, A.; Gigante, G. E.

    Atomic Rayleigh scattering cross-sections for low, medium and high Z atoms are measured in vacuum using X-ray tube with a secondary target as an excitation source instead of radioisotopes. Monoenergetic Kα radiation emitted from the secondary target and monoenergetic radiation produced using two secondary targets with filters coupled to an X-ray tube are compared. The Kα radiation from the second target of the system is used to excite the sample. The background has been reduced considerably and the monochromacy is improved. Elastic scattering of Kα X-ray line energies of the secondary target by the sample is recorded with Hp Ge and Si (Li) detectors. A new approach is developed to estimate the solid angle approximation and geometrical efficiency for a system with experimental arrangement using X-ray tube and secondary target. The variation of the solid angle is studied by changing the radius and length of the collimators towards and away from the source and sample. From these values the variation of the total solid angle and geometrical efficiency is deduced and the optimum value is used for the experimental work. The efficiency is larger because the X-ray fluorescent source acts as a converter. Experimental results based on this system are compared with theoretical estimates and good agreement is observed in between them.

  4. Population differentiation of the shore crab Carcinus maenas (Brachyura: Portunidae on the southwest English coast based on genetic and morphometric analyses

    Directory of Open Access Journals (Sweden)

    Inês C. Silva

    2010-08-01

    Full Text Available Carcinus maenas has a planktonic larval phase which can potentially disperse over large distances. Consequently, larval transport is expected to play an important role in promoting gene flow and determining population structure. In the present study, population structuring on the southwest coast of England was analysed using molecular and morphometric approaches. Variation at eight microsatellite loci suggested that the individuals sampled within this region comprise a single genetic population and that gene flow among them is not restricted. Nevertheless, the FST values estimated across loci for all populations suggested that the Tamar population was significantly different from the Exe, Camel and Torridge populations. This differentiation is not explained by isolation by distance, and coastal hydrological events that are apparently influencing larval flux might be the cause of this pattern. Morphometric analysis was also performed. Analysis of carapace and chela shape variation using landmark-based geometric morphometrics revealed extensive morphological variability, as the multivariate analysis of variance showed significant morphometric differences among geographic groups for both sexes. Thus, the morphological differentiation found may be a plastic response to habitat-specific selection pressures.

  5. A Hierarchical FEM approach for Simulation of Geometrical and Material induced Instability of Composite Structures

    DEFF Research Database (Denmark)

    Hansen, Anders L.; Lund, Erik; Pinho, Silvestre T.

    2009-01-01

    In this paper a hierarchical FE approach is utilized to simulate delamination in a composite plate loaded in uni-axial compression. Progressive delamination is modelled by use of cohesive interface elements that are automatically embedded. The non-linear problem is solved quasi-statically in whic...

  6. Foot morphometric phenomena.

    Science.gov (United States)

    Agić, Ante

    2007-06-01

    Knowledge of the foot morphometry is important for proper foot structure and function. Foot structure as a vital part of human body is important for many reasons. The foot anthropometric and morphology phenomena are analyzed together with hidden biomechanical descriptors in order to fully characterize foot functionality. For Croatian student population the scatter data of the individual foot variables were interpolated by multivariate statistics. Foot morphometric descriptors are influenced by many factors, such as life style, climate, and things of great importance in human society. Dominant descriptors related to fit and comfort are determined by the use 3D foot shape and advanced foot biomechanics. Some practical recommendations and conclusions for medical, sportswear and footwear practice are highlighted.

  7. A Geometric Dictionary Learning Based Approach for Fluorescence Spectroscopy Image Fusion

    OpenAIRE

    Zhiqin Zhu; Guanqiu Qi; Yi Chai; Penghua Li

    2017-01-01

    In recent years, sparse representation approaches have been integrated into multi-focus image fusion methods. The fused images of sparse-representation-based image fusion methods show great performance. Constructing an informative dictionary is a key step for sparsity-based image fusion method. In order to ensure sufficient number of useful bases for sparse representation in the process of informative dictionary construction, image patches from all source images are classified into different ...

  8. A multiple kernel classification approach based on a Quadratic Successive Geometric Segmentation methodology with a fault diagnosis case.

    Science.gov (United States)

    Honório, Leonardo M; Barbosa, Daniele A; Oliveira, Edimar J; Garcia, Paulo A Nepomuceno; Santos, Murillo F

    2018-03-01

    This work presents a new approach for solving classification and learning problems. The Successive Geometric Segmentation technique is applied to encapsulate large datasets by using a series of Oriented Bounding Hyper Box (OBHBs). Each OBHB is obtained through linear separation analysis and each one represents a specific region in a pattern's solution space. Also, each OBHB can be seen as a data abstraction layer and be considered as an individual Kernel. Thus, it is possible by applying a quadratic discriminant function, to assemble a set of nonlinear surfaces separating each desirable pattern. This approach allows working with large datasets using high speed linear analysis tools and yet providing a very accurate non-linear classifier as final result. The methodology was tested using the UCI Machine Learning repository and a Power Transformer Fault Diagnosis real scenario problem. The results were compared with different approaches provided by literature and, finally, the potential and further applications of the methodology were also discussed. Copyright © 2018 ISA. Published by Elsevier Ltd. All rights reserved.

  9. Does geometric morphometrics serve the needs of plasticity research?

    Indian Academy of Sciences (India)

    Prakash

    off from his lifetime of studies of the Cold War between the. United States and the Soviet Union to write a fine short book,. The Landscape of History (2004), ..... Schaik 1997), more subtle strategies of sexual selection, such as sperm competition ...

  10. ROUNDSCALE SPEARFISH branchiostegal morphometric data

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — The morphometric characteristics that separate white marlin Kajikia albidus from roundscale spearfish Tetrapturus georgii can be difficult for non-experts to...

  11. A Descriptive Morphometric Approach of the Skull and Mandible of the Common Opossum (Didelphis Marsupialis Linnaeus, 1758 in the Caribbean and its Clinical Application during Regional Anaesthesia

    Directory of Open Access Journals (Sweden)

    Reda Mohamed

    2018-03-01

    Full Text Available The aim of this study was to determine the morphometric values of the skull and the mandible of the common opossum from the Caribbean island of Trinidad and Tobago. The skulls and mandibles were obtained from ten opossums captured for research purposes. The skulls and mandibles were prepared and cleaned using standard method. Some anatomical landmarks of the skulls and mandibles were identified and measured. The results were important for identification of the common opossum via comparison and discussion of our results with that of other marsupial species. Furthermore, the results had clinical importance with regard to regional nerve blocks of the infraorbital, inferior alveolar, and mental nerves for dental extraction and head surgery. This study concluded that by using the anatomical landmarks of the infraorbital and mental foramina it will be easier for the veterinarian surgeons during the application of local anesthetic agent for the infraorbital, inferior alveolar, and mental nerve blocks.

  12. Attitude Modeling Using Kalman Filter Approach for Improving the Geometric Accuracy of Cartosat-1 Data Products

    Directory of Open Access Journals (Sweden)

    Nita H. SHAH

    2010-07-01

    Full Text Available This paper deals with the rigorous photogrammetric solution to model the uncertainty in the orientation parameters of Indian Remote Sensing Satellite IRS-P5 (Cartosat-1. Cartosat-1 is a three axis stabilized spacecraft launched into polar sun-synchronous circular orbit at an altitude of 618 km. The satellite has two panchromatic (PAN cameras with nominal resolution of ~2.5 m. The camera looking ahead is called FORE mounted with +26 deg angle and the other looking near nadir is called AFT mounted with -5 deg, in along track direction. Data Product Generation Software (DPGS system uses the rigorous photogrammetric Collinearity model in order to utilize the full system information, together with payload geometry & control points, for estimating the uncertainty in attitude parameters. The initial orbit, attitude knowledge is obtained from GPS bound orbit measurement, star tracker and gyros. The variations in satellite attitude with time are modelled using simple linear polynomial model. Also, based on this model, Kalman filter approach is studied and applied to improve the uncertainty in the orientation of spacecraft with high quality ground control points (GCPs. The sequential estimator (Kalman filter is used in an iterative process which corrects the parameters at each time of observation rather than at epoch time. Results are presented for three stereo data sets. The accuracy of model depends on the accuracy of the control points.

  13. Novel Approaches to Improve the Combined Geometric and Dosimetric Performance of Existing IG-IMRT Systems

    International Nuclear Information System (INIS)

    Jaffray, D A; Sharpe, M; Rink, A; Letourneau, D

    2010-01-01

    The development of image-guidance technologies offer increased precision and accuracy in the placement of radiation therapy dose distributions in the human body. Kilovoltage and megavoltage systems now offer sub-mm accuracy and precision in localizing the treatment and planned isocenters. While this represents a significant improvement in our ability to target lesions, the performance of these systems in terms of their precise and accurate placement of field edges, including individual multi-leaves, is not performing at the same level. The development of dosimeters with small, imageable regions of response will allow these new systems to be evaluated with a much higher level of precision and accuracy. Furthermore, the development of completely automated systems that exploit the robotic nature of the imaging and delivery subsystems should permit the true performance of current IG-IMRT systems to be realized, quantified, and monitored. This includes adjustments to the treatment machines operating parameters, as well as, refinements of the planning system's beam model. Specifically, investigations into novel approaches of employing these detectors, automating their use to maximize system performance, and, the development of novel detectors for compatibility in MR-based systems will be discussed.

  14. A NURBS-based finite element model applied to geometrically nonlinear elastodynamics using a corotational approach

    KAUST Repository

    Espath, L. F R; Braun, Alexandre Luis; Awruch, Armando Miguel; Dalcin, Lisandro

    2015-01-01

    A numerical model to deal with nonlinear elastodynamics involving large rotations within the framework of the finite element based on NURBS (Non-Uniform Rational B-Spline) basis is presented. A comprehensive kinematical description using a corotational approach and an orthogonal tensor given by the exact polar decomposition is adopted. The state equation is written in terms of corotational variables according to the hypoelastic theory, relating the Jaumann derivative of the Cauchy stress to the Eulerian strain rate.The generalized-α method (Gα) method and Generalized Energy-Momentum Method with an additional parameter (GEMM+ξ) are employed in order to obtain a stable and controllable dissipative time-stepping scheme with algorithmic conservative properties for nonlinear dynamic analyses.The main contribution is to show that the energy-momentum conservation properties and numerical stability may be improved once a NURBS-based FEM in the spatial discretization is used. Also it is shown that high continuity can postpone the numerical instability when GEMM+ξ with consistent mass is employed; likewise, increasing the continuity class yields a decrease in the numerical dissipation. A parametric study is carried out in order to show the stability and energy budget in terms of several properties such as continuity class, spectral radius and lumped as well as consistent mass matrices.

  15. A NURBS-based finite element model applied to geometrically nonlinear elastodynamics using a corotational approach

    KAUST Repository

    Espath, L. F R

    2015-02-03

    A numerical model to deal with nonlinear elastodynamics involving large rotations within the framework of the finite element based on NURBS (Non-Uniform Rational B-Spline) basis is presented. A comprehensive kinematical description using a corotational approach and an orthogonal tensor given by the exact polar decomposition is adopted. The state equation is written in terms of corotational variables according to the hypoelastic theory, relating the Jaumann derivative of the Cauchy stress to the Eulerian strain rate.The generalized-α method (Gα) method and Generalized Energy-Momentum Method with an additional parameter (GEMM+ξ) are employed in order to obtain a stable and controllable dissipative time-stepping scheme with algorithmic conservative properties for nonlinear dynamic analyses.The main contribution is to show that the energy-momentum conservation properties and numerical stability may be improved once a NURBS-based FEM in the spatial discretization is used. Also it is shown that high continuity can postpone the numerical instability when GEMM+ξ with consistent mass is employed; likewise, increasing the continuity class yields a decrease in the numerical dissipation. A parametric study is carried out in order to show the stability and energy budget in terms of several properties such as continuity class, spectral radius and lumped as well as consistent mass matrices.

  16. Geometric Simulation Approach for Grading and Assessing the Thermostability of CALBs

    Directory of Open Access Journals (Sweden)

    B. Senthilkumar

    2016-01-01

    Full Text Available Candida antarctica lipase B (CALB is a known stable and highly active enzyme used widely in biodiesel synthesis. In this work, the stability of native (4K6G and mutant (4K5Q CALB was studied through various structural parameters using conformational sampling approach. The contours of polar surface area and surface area of mutant CALB were 11357.67 Å2 and 30007.4 Å2, respectively, showing an enhanced stability compared to native CALB with a statistically significant P value of < 0.0001. Moreover, simulated thermal denaturation of CALB, a process involving dilution of hydrogen bond, significantly shielded against different intervals of energy application in mutant CALB revealing its augmentation of structural rigidity against native CALB. Finally, computational docking analysis showed an increase in the binding affinity of CALB and its substrate (triglyceride in mutant CALB with Atomic Contact Energy (ACE of −91.23 kcal/mol compared to native CALB (ACE of −70.3 kcal/mol. The computational observations proposed that the use of mutant CALB (4K5Q could serve as a best template for production of biodiesel in the future. Additionally, it can also be used as a template to identify efficient thermostable lipases through further mutations.

  17. Spatio-Temporal Constrained Human Trajectory Generation from the PIR Motion Detector Sensor Network Data: A Geometric Algebra Approach.

    Science.gov (United States)

    Yu, Zhaoyuan; Yuan, Linwang; Luo, Wen; Feng, Linyao; Lv, Guonian

    2015-12-30

    Passive infrared (PIR) motion detectors, which can support long-term continuous observation, are widely used for human motion analysis. Extracting all possible trajectories from the PIR sensor networks is important. Because the PIR sensor does not log location and individual information, none of the existing methods can generate all possible human motion trajectories that satisfy various spatio-temporal constraints from the sensor activation log data. In this paper, a geometric algebra (GA)-based approach is developed to generate all possible human trajectories from the PIR sensor network data. Firstly, the representation of the geographical network, sensor activation response sequences and the human motion are represented as algebraic elements using GA. The human motion status of each sensor activation are labeled using the GA-based trajectory tracking. Then, a matrix multiplication approach is developed to dynamically generate the human trajectories according to the sensor activation log and the spatio-temporal constraints. The method is tested with the MERL motion database. Experiments show that our method can flexibly extract the major statistical pattern of the human motion. Compared with direct statistical analysis and tracklet graph method, our method can effectively extract all possible trajectories of the human motion, which makes it more accurate. Our method is also likely to provides a new way to filter other passive sensor log data in sensor networks.

  18. Spatio-Temporal Constrained Human Trajectory Generation from the PIR Motion Detector Sensor Network Data: A Geometric Algebra Approach

    Directory of Open Access Journals (Sweden)

    Zhaoyuan Yu

    2015-12-01

    Full Text Available Passive infrared (PIR motion detectors, which can support long-term continuous observation, are widely used for human motion analysis. Extracting all possible trajectories from the PIR sensor networks is important. Because the PIR sensor does not log location and individual information, none of the existing methods can generate all possible human motion trajectories that satisfy various spatio-temporal constraints from the sensor activation log data. In this paper, a geometric algebra (GA-based approach is developed to generate all possible human trajectories from the PIR sensor network data. Firstly, the representation of the geographical network, sensor activation response sequences and the human motion are represented as algebraic elements using GA. The human motion status of each sensor activation are labeled using the GA-based trajectory tracking. Then, a matrix multiplication approach is developed to dynamically generate the human trajectories according to the sensor activation log and the spatio-temporal constraints. The method is tested with the MERL motion database. Experiments show that our method can flexibly extract the major statistical pattern of the human motion. Compared with direct statistical analysis and tracklet graph method, our method can effectively extract all possible trajectories of the human motion, which makes it more accurate. Our method is also likely to provides a new way to filter other passive sensor log data in sensor networks.

  19. Geometrical parton

    Energy Technology Data Exchange (ETDEWEB)

    Ebata, T [Tohoku Univ., Sendai (Japan). Coll. of General Education

    1976-06-01

    The geometrical distribution inferred from the inelastic cross section is assumed to be proportional to the partial waves. The precocious scaling and the Q/sup 2/-dependence of various quantities are treated from the geometrical point of view. It is shown that the approximate conservation of the orbital angular momentum may be a very practical rule to understand the helicity structure of various hadronic and electromagnetic reactions. The rule can be applied to inclusive reactions as well. The model is also applied to large angle processes. Through the discussion, it is suggested that many peculiar properties of the quark-parton can be ascribed to the geometrical effects.

  20. Sperm kinematic, head morphometric and kinetic-morphometric subpopulations in the blue fox (Alopex lagopus

    Directory of Open Access Journals (Sweden)

    Carles Soler

    2017-01-01

    Full Text Available This work provides information on the blue fox ejaculated sperm quality needed for seminal dose calculations. Twenty semen samples, obtained by masturbation, were analyzed for kinematic and morphometric parameters by using CASA-Mot and CASA-Morph system and principal component (PC analysis. For motility, eight kinematic parameters were evaluated, which were reduced to PC1, related to linear variables, and PC2, related to oscillatory movement. The whole population was divided into three independent subpopulations: SP1, fast cells with linear movement; SP2, slow cells and nonoscillatory motility; and SP3, medium speed cells and oscillatory movement. In almost all cases, the subpopulation distribution by animal was significantly different. Head morphology analysis generated four size and four shape parameters, which were reduced to PC1, related to size, and PC2, related to shape of the cells. Three morphometric subpopulations existed: SP1: large oval cells; SP2: medium size elongated cells; and SP3: small and short cells. The subpopulation distribution differed between animals. Combining the kinematic and morphometric datasets produced PC1, related to morphometric parameters, and PC2, related to kinematics, which generated four sperm subpopulations - SP1: high oscillatory motility, large and short heads; SP2: medium velocity with small and short heads; SP3: slow motion small and elongated cells; and SP4: high linear speed and large elongated cells. Subpopulation distribution was different in all animals. The establishment of sperm subpopulations from kinematic, morphometric, and combined variables not only improves the well-defined fox semen characteristics and offers a good conceptual basis for fertility and sperm preservation techniques in this species, but also opens the door to use this approach in other species, included humans.

  1. Geometric analysis

    CERN Document Server

    Bray, Hubert L; Mazzeo, Rafe; Sesum, Natasa

    2015-01-01

    This volume includes expanded versions of the lectures delivered in the Graduate Minicourse portion of the 2013 Park City Mathematics Institute session on Geometric Analysis. The papers give excellent high-level introductions, suitable for graduate students wishing to enter the field and experienced researchers alike, to a range of the most important areas of geometric analysis. These include: the general issue of geometric evolution, with more detailed lectures on Ricci flow and Kähler-Ricci flow, new progress on the analytic aspects of the Willmore equation as well as an introduction to the recent proof of the Willmore conjecture and new directions in min-max theory for geometric variational problems, the current state of the art regarding minimal surfaces in R^3, the role of critical metrics in Riemannian geometry, and the modern perspective on the study of eigenfunctions and eigenvalues for Laplace-Beltrami operators.

  2. Asymptotic and geometrical quantization

    International Nuclear Information System (INIS)

    Karasev, M.V.; Maslov, V.P.

    1984-01-01

    The main ideas of geometric-, deformation- and asymptotic quantizations are compared. It is shown that, on the one hand, the asymptotic approach is a direct generalization of exact geometric quantization, on the other hand, it generates deformation in multiplication of symbols and Poisson brackets. Besides investigating the general quantization diagram, its applications to the calculation of asymptotics of a series of eigenvalues of operators possessing symmetry groups are considered

  3. A geometric stochastic approach based on marked point processes for road mark detection from high resolution aerial images

    Science.gov (United States)

    Tournaire, O.; Paparoditis, N.

    Road detection has been a topic of great interest in the photogrammetric and remote sensing communities since the end of the 70s. Many approaches dealing with various sensor resolutions, the nature of the scene or the wished accuracy of the extracted objects have been presented. This topic remains challenging today as the need for accurate and up-to-date data is becoming more and more important. Based on this context, we will study in this paper the road network from a particular point of view, focusing on road marks, and in particular dashed lines. Indeed, they are very useful clues, for evidence of a road, but also for tasks of a higher level. For instance, they can be used to enhance quality and to improve road databases. It is also possible to delineate the different circulation lanes, their width and functionality (speed limit, special lanes for buses or bicycles...). In this paper, we propose a new robust and accurate top-down approach for dashed line detection based on stochastic geometry. Our approach is automatic in the sense that no intervention from a human operator is necessary to initialise the algorithm or to track errors during the process. The core of our approach relies on defining geometric, radiometric and relational models for dashed lines objects. The model also has to deal with the interactions between the different objects making up a line, meaning that it introduces external knowledge taken from specifications. Our strategy is based on a stochastic method, and in particular marked point processes. Our goal is to find the objects configuration minimising an energy function made-up of a data attachment term measuring the consistency of the image with respect to the objects and a regularising term managing the relationship between neighbouring objects. To sample the energy function, we use Green algorithm's; coupled with a simulated annealing to find its minimum. Results from aerial images at various resolutions are presented showing that our

  4. Synchronization of integral and fractional order chaotic systems a differential algebraic and differential geometric approach with selected applications in real-time

    CERN Document Server

    Martínez-Guerra, Rafael; Gómez-Cortés, Gian Carlo

    2015-01-01

    This book provides a general overview of several concepts of synchronization and brings together related approaches to secure communication in chaotic systems. This is achieved using a combination of analytic, algebraic, geometrical and asymptotical methods to tackle the dynamical feedback stabilization problem. In particular, differential-geometric and algebraic differential concepts reveal important structural properties of chaotic systems and serve as guide for the construction of design procedures for a wide variety of chaotic systems. The basic differential algebraic and geometric concepts are presented in the first few chapters in a novel way as design tools, together with selected experimental studies demonstrating their importance. The subsequent chapters treat recent applications. Written for graduate students in applied physical sciences, systems engineers, and applied mathematicians interested in synchronization of chaotic systems and in secure communications, this self-contained text requires only...

  5. Cluster Validity Classification Approaches Based on Geometric Probability and Application in the Classification of Remotely Sensed Images

    Directory of Open Access Journals (Sweden)

    LI Jian-Wei

    2014-08-01

    Full Text Available On the basis of the cluster validity function based on geometric probability in literature [1, 2], propose a cluster analysis method based on geometric probability to process large amount of data in rectangular area. The basic idea is top-down stepwise refinement, firstly categories then subcategories. On all clustering levels, use the cluster validity function based on geometric probability firstly, determine clusters and the gathering direction, then determine the center of clustering and the border of clusters. Through TM remote sensing image classification examples, compare with the supervision and unsupervised classification in ERDAS and the cluster analysis method based on geometric probability in two-dimensional square which is proposed in literature 2. Results show that the proposed method can significantly improve the classification accuracy.

  6. Does flat epithelial atypia have rounder nuclei than columnar cell change/hyperplasia? A morphometric approach to columnar cell lesions of the breast.

    Science.gov (United States)

    Yamashita, Yoshiko; Ichihara, Shu; Moritani, Suzuko; Yoon, Han-Seung; Yamaguchi, Masahiro

    2016-06-01

    Columnar cell lesions of the breast encompass columnar cell change/hyperplasia (CCC/CCH) and flat epithelial atypia (FEA). These have attracted researchers because emerging data suggest that FEA may represent the earliest histologically detectable non-obligate precursor of breast cancer. However, it is occasionally difficult to distinguish FEA from CCC/CCH because of similar histology. Although the nuclei of FEA are frequently described as relatively round compared with those of CCC/CCH, there are few morphometric studies to support this statement. The aim of this study was to provide objective data as to the nuclear shape in columnar cell lesions. As a shape descriptor, we adopted ellipticity that is defined by the formula 2b/2a, where a is the length of the long axis of the ellipse and b is the length of the short axis. Contrary to circularity, ellipticity reflects the overall configuration of an ellipse irrespective of surface irregularity. Our image analysis included generating whole slide images, extracting glandular cell nuclei, measuring nuclear ellipticity, and superimposing graded colors based on execution of results on the captured images. A total of 7917 nuclei extracted from 22 FEA images and 5010 nuclei extracted from 13 CCC/CCH images were analyzed. There was a significant difference in nuclear roundness between FEA and CCC/CCH with mean ellipticity values of 0.723 and 0.679, respectively (p < 0.001, Welch's t test). Furthermore, FEA with malignancy had significantly rounder nuclei than FEA without malignancy (p < 0.001). Our preliminary results suggest that nuclear ellipticity is a key parameter in reproducibly classifying columnar cell lesions of the breast.

  7. Threatened Neotropical mollusks: analysis of shape differences in three endemic snails from High Paraná River by geometric morphometrics Moluscos neotropicales amenazados: análisis de diferencias de forma en tres caracoles endémicos del río Alto Paraná mediante morfometría geométrica

    Directory of Open Access Journals (Sweden)

    Roberto E. Vogler

    2012-12-01

    Full Text Available Variation in shape among a living and 2 extinct aquatic snails of the genus Aylacostoma, using a geometric morphometric method of thin plate splines and multivariate analysis was investigated. The analysis was performed to evaluate the diagnostic capability of this method and to explore shell shape differences, due to the lack of other data, in an attempt to answer why only 1 of the species persisted in the wild. Sixteen landmarks in a bi-dimensional space for 32 shells of type, paratype and reference specimens deposited in museums of Argentina were defined. Analysis was successful in assigning individual specimens to particular species. Statistically significant differences in last whorl, aperture, and spire were found for the first 4 non-uniform components explaining an 85% of local variation observed. Differences could be related to a differential use of habitat and/or to the degree of exposure to water current. More globose shell found in the extinct species could be associated to habitats and substrata with the highest water currents, whereas the more stylized shell in the third species could be related to a preference for more protected habitats, like those where it presently occurs.La variación de forma entre una especie viviente y dos extintas de caracoles acuáticos del género Aylacostoma, fue investigada mediante el método de morfometría geométrica de "thin plate splines" y análisis multivariado. El análisis se realizó para evaluar la capacidad diagnóstica del método y explorar las diferencias de forma de conchilla, debido a la falta de otros datos, en un intento por responder por qué sólo una de las especies persistió en la naturaleza. Dieciséis "landmarks" fueron definidos en un espacio bi-dimensional para 32 conchillas de ejemplares tipo, paratipo y de referencia depositados en museos de Argentina. El análisis fue exitoso en la asignación de los individuos a especies particulares. Se encontraron diferencias

  8. A new approach for handling longitudinal count data with zero-inflation and overdispersion: poisson geometric process model.

    Science.gov (United States)

    Wan, Wai-Yin; Chan, Jennifer S K

    2009-08-01

    For time series of count data, correlated measurements, clustering as well as excessive zeros occur simultaneously in biomedical applications. Ignoring such effects might contribute to misleading treatment outcomes. A generalized mixture Poisson geometric process (GMPGP) model and a zero-altered mixture Poisson geometric process (ZMPGP) model are developed from the geometric process model, which was originally developed for modelling positive continuous data and was extended to handle count data. These models are motivated by evaluating the trend development of new tumour counts for bladder cancer patients as well as by identifying useful covariates which affect the count level. The models are implemented using Bayesian method with Markov chain Monte Carlo (MCMC) algorithms and are assessed using deviance information criterion (DIC).

  9. Variability of worked examples and transfer of geometrical problem-solving skills : a cognitive-load approach

    NARCIS (Netherlands)

    Paas, Fred G.W.C.; van Merrienboer, Jeroen J.G.; van Merrienboer, J.J.G.

    1994-01-01

    Four computer-based training strategies for geometrical problem solving in the domain of computer numerically controlled machinery programming were studied with regard to their effects on training performance, transfer performance, and cognitive load. A low- and a high-variability conventional

  10. Treatment simulation approaches for the estimation of the distributions of treatment quality parameters generated by geometrical uncertainties

    International Nuclear Information System (INIS)

    Baum, C; Alber, M; Birkner, M; Nuesslin, F

    2004-01-01

    Geometric uncertainties arise during treatment planning and treatment and mean that dose-dependent parameters such as EUD are random variables with a patient specific probability distribution. Treatment planning with highly conformal treatment techniques such as intensity modulated radiation therapy requires new evaluation tools which allow us to estimate this influence of geometrical uncertainties on the probable treatment dose for a planned dose distribution. Monte Carlo simulations of treatment courses with recalculation of the dose according to the daily geometric errors are a gold standard for such an evaluation. Distribution histograms which show the relative frequency of a treatment quality parameter in the treatment simulations can be used to evaluate the potential risks and chances of a planned dose distribution. As treatment simulations with dose recalculation are very time consuming for sufficient statistical accuracy, it is proposed to do treatment simulations in the dose parameter space where the result is mainly determined by the systematic and random component of the geometrical uncertainties. Comparison of the parameter space simulation method with the gold standard for prostate cases and a head and neck case shows good agreement as long as the number of fractions is high enough and the influence of tissue inhomogeneities and surface curvature on the dose is small

  11. Agustin de Betancourt’s Wind Machine for Draining Marshy Ground: Approach to Its Geometric Modeling with Autodesk Inventor Professional

    Directory of Open Access Journals (Sweden)

    José Ignacio Rojas-Sola

    2016-12-01

    Full Text Available The present study shows the process followed in making the three-dimensional model and geometric documentation of a historical invention of the renowned Spanish engineer Agustin de Betancourt y Molina, which forms part of his rich legacy. Specifically, this was a wind machine for draining marshy ground, designed in 1789. The present research relies on the computer-aided design (CAD techniques using Autodesk Inventor Professional software, based on the scant information provided by the only two drawings of the machine, making it necessary to propose a number of dimensional and geometric hypotheses as well as a series of movement restrictions (degrees of freedom, to arrive at a consistent design. The results offer a functional design for this historic invention.

  12. Morphometric differences and fluctuating asymmetry in Melipona subnitida Ducke 1910 (Hymenoptera: Apidae in different types of housing

    Directory of Open Access Journals (Sweden)

    C. B. S. Lima

    Full Text Available Abstract A geometric morphometrics approach was applied to evaluate differences in forewing patterns of the Jandaira bee (Melipona subnitida Ducke. For this, we studied the presence of fluctuating asymmetry (FA in forewing shape and size of colonies kept in either rational hive boxes or natural tree trunks. We detected significant FA for wing size as well as wing shape independent of the type of housing (rational box or tree trunks, indicating the overall presence of stress during the development of the studied specimens. FA was also significant (p < 0.01 between rational boxes, possibly related to the use of various models of rational boxes used for keeping stingless bees. In addition, a Principal Component Analysis indicated morphometric variation between bee colonies kept in either rational hive boxes or in tree trunks, that may be related to the different origins of the bees: tree trunk colonies were relocated natural colonies while rational box colonies originated from multiplying other colonies. We conclude that adequate measures should be taken to reduce the amount of stress during bee handling by using standard models of rational boxes that cause the least disruption.

  13. Morphometric differences and fluctuating asymmetry in Melipona subnitida Ducke 1910 (Hymenoptera: Apidae) in different types of housing.

    Science.gov (United States)

    Lima, C B S; Nunes, L A; Carvalho, C A L; Ribeiro, M F; Souza, B A; Silva, C S B

    2016-01-01

    A geometric morphometrics approach was applied to evaluate differences in forewing patterns of the Jandaira bee (Melipona subnitida Ducke). For this, we studied the presence of fluctuating asymmetry (FA) in forewing shape and size of colonies kept in either rational hive boxes or natural tree trunks. We detected significant FA for wing size as well as wing shape independent of the type of housing (rational box or tree trunks), indicating the overall presence of stress during the development of the studied specimens. FA was also significant (p < 0.01) between rational boxes, possibly related to the use of various models of rational boxes used for keeping stingless bees. In addition, a Principal Component Analysis indicated morphometric variation between bee colonies kept in either rational hive boxes or in tree trunks, that may be related to the different origins of the bees: tree trunk colonies were relocated natural colonies while rational box colonies originated from multiplying other colonies. We conclude that adequate measures should be taken to reduce the amount of stress during bee handling by using standard models of rational boxes that cause the least disruption.

  14. Geometric recursion

    DEFF Research Database (Denmark)

    Andersen, Jørgen Ellegaard; Borot, Gaëtan; Orantin, Nicolas

    We propose a general theory whose main component are functorial assignments ∑→Ω∑ ∈ E (∑), for a large class of functors E from a certain category of bordered surfaces (∑'s) to a suitable a target category of topological vector spaces. The construction is done by summing appropriate compositions...... as Poisson structures on the moduli space of flat connections. The theory has a wider scope than that and one expects that many functorial objects in low-dimensional geometry and topology should have a GR construction. The geometric recursion has various projections to topological recursion (TR) and we...... in particular show it retrieves all previous variants and applications of TR. We also show that, for any initial data for topological recursion, one can construct initial data for GR with values in Frobenius algebra-valued continuous functions on Teichmueller space, such that the ωg,n of TR are obtained...

  15. Non-iterative geometric approach for inverse kinematics of redundant lead-module in a radiosurgical snake-like robot.

    Science.gov (United States)

    Omisore, Olatunji Mumini; Han, Shipeng; Ren, Lingxue; Zhang, Nannan; Ivanov, Kamen; Elazab, Ahmed; Wang, Lei

    2017-08-01

    Snake-like robot is an emerging form of serial-link manipulator with the morphologic design of biological snakes. The redundant robot can be used to assist medical experts in accessing internal organs with minimal or no invasion. Several snake-like robotic designs have been proposed for minimal invasive surgery, however, the few that were developed are yet to be fully explored for clinical procedures. This is due to lack of capability for full-fledged spatial navigation. In rare cases where such snake-like designs are spatially flexible, there exists no inverse kinematics (IK) solution with both precise control and fast response. In this study, we proposed a non-iterative geometric method for solving IK of lead-module of a snake-like robot designed for therapy or ablation of abdominal tumors. The proposed method is aimed at providing accurate and fast IK solution for given target points in the robot's workspace. n-1 virtual points (VPs) were geometrically computed and set as coordinates of intermediary joints in an n-link module. Suitable joint angles that can place the end-effector at given target points were then computed by vectorizing coordinates of the VPs, in addition to coordinates of the base point, target point, and tip of the first link in its default pose. The proposed method is applied to solve IK of two-link and redundant four-link modules. Both two-link and four-link modules were simulated with Robotics Toolbox in Matlab 8.3 (R2014a). Implementation result shows that the proposed method can solve IK of the spatially flexible robot with minimal error values. Furthermore, analyses of results from both modules show that the geometric method can reach 99.21 and 88.61% of points in their workspaces, respectively, with an error threshold of 1 mm. The proposed method is non-iterative and has a maximum execution time of 0.009 s. This paper focuses on solving IK problem of a spatially flexible robot which is part of a developmental project for abdominal

  16. Doubly-scattered-radiation contribution to Lidar returns from fog, evaluated by means of a simple geometrical approach

    International Nuclear Information System (INIS)

    Bruscaglioni, P.; Ismaelli, A.

    1978-01-01

    The contribution of doubly scattered radiation to the return of a monostatic Lidar, used for measurement of atmospheric visibility, is evaluated by means of a simple geometrical scheme. A very narrow laser beam is considered, to obtain an expression of the ratio D/S of doubly scattered power to singly scattered power. This assumption allows an easy consideration of any angle of scattering and the introduction of time into the calculations. Numerical computations are performed for several models of fog. Our results are similar, though a little lower, than the results of other theoretical treatments of this problem based on different assumptions. (author)

  17. Morphometric variation of the Herichthys bartoni (Bean, 1892 species group (Teleostei: Cichlidae: How many species comprise H. labridens (Pellegrin, 1903?

    Directory of Open Access Journals (Sweden)

    Omar Mejía

    Full Text Available Cichlids of the tribe Heroini have long been a source of taxonomical conflict. In particular, the species included in the Herichthys bartoni group have failed to be recovered as monophyletic in different molecular studies. In this paper we use traditional and geometric morphometrics to evaluate morphological variation in the species included in the H. bartoni complex in order to evaluate the number of species it contains. An update of a previously published DNA barcoding study suggests the existence of three genetic clusters that included the six recognized species analyzed in this study, none of them recovered as monophyletic. On the other hand, geometric morphometrics arise as a useful tool to discriminate species due that traditional morphometrics showed a high overlap in the characters analyzed that prevents the proposal of diagnostic characters.

  18. Geometrically Consistent Mesh Modification

    KAUST Repository

    Bonito, A.

    2010-01-01

    A new paradigm of adaptivity is to execute refinement, coarsening, and smoothing of meshes on manifolds with incomplete information about their geometry and yet preserve position and curvature accuracy. We refer to this collectively as geometrically consistent (GC) mesh modification. We discuss the concept of discrete GC, show the failure of naive approaches, and propose and analyze a simple algorithm that is GC and accuracy preserving. © 2010 Society for Industrial and Applied Mathematics.

  19. Watershed-based Morphometric Analysis: A Review

    Science.gov (United States)

    Sukristiyanti, S.; Maria, R.; Lestiana, H.

    2018-02-01

    Drainage basin/watershed analysis based on morphometric parameters is very important for watershed planning. Morphometric analysis of watershed is the best method to identify the relationship of various aspects in the area. Despite many technical papers were dealt with in this area of study, there is no particular standard classification and implication of each parameter. It is very confusing to evaluate a value of every morphometric parameter. This paper deals with the meaning of values of the various morphometric parameters, with adequate contextual information. A critical review is presented on each classification, the range of values, and their implications. Besides classification and its impact, the authors also concern about the quality of input data, either in data preparation or scale/the detail level of mapping. This review paper hopefully can give a comprehensive explanation to assist the upcoming research dealing with morphometric analysis.

  20. Interference statistics and capacity analysis for uplink transmission in two-tier small cell networks: A geometric probability approach

    KAUST Repository

    Tabassum, Hina

    2014-07-01

    This paper presents a novel framework to derive the statistics of the interference considering dedicated and shared spectrum access for uplink transmission in two-tier small cell networks such as the macrocell-femtocell networks. The framework exploits the distance distributions from geometric probability theory to characterize the uplink interference while considering a traditional grid-model set-up for macrocells along with the randomly deployed femtocells. The derived expressions capture the impact of path-loss, composite shadowing and fading, uniform and non-uniform traffic loads, spatial distribution of femtocells, and partial and full spectral reuse among femtocells. Considering dedicated spectrum access, first, we derive the statistics of co-tier interference incurred at both femtocell and macrocell base stations (BSs) from a single interferer by approximating generalized- K composite fading distribution with the tractable Gamma distribution. We then derive the distribution of the number of interferers considering partial spectral reuse and moment generating function (MGF) of the cumulative interference for both partial and full spectral reuse scenarios. Next, we derive the statistics of the cross-tier interference at both femtocell and macrocell BSs considering shared spectrum access. Finally, we utilize the derived expressions to analyze the capacity in both dedicated and shared spectrum access scenarios. The derived expressions are validated by the Monte Carlo simulations. Numerical results are generated to assess the feasibility of shared and dedicated spectrum access in femtocells under varying traffic load and spectral reuse scenarios. © 2014 IEEE.

  1. Securing a cyber physical system in nuclear power plants using least square approximation and computational geometric approach

    International Nuclear Information System (INIS)

    Gawand, Hemangi Laxman; Bhattacharjee, A. K.; Roy, Kallol

    2017-01-01

    In industrial plants such as nuclear power plants, system operations are performed by embedded controllers orchestrated by Supervisory Control and Data Acquisition (SCADA) software. A targeted attack (also termed a control aware attack) on the controller/SCADA software can lead a control system to operate in an unsafe mode or sometimes to complete shutdown of the plant. Such malware attacks can result in tremendous cost to the organization for recovery, cleanup, and maintenance activity. SCADA systems in operational mode generate huge log files. These files are useful in analysis of the plant behavior and diagnostics during an ongoing attack. However, they are bulky and difficult for manual inspection. Data mining techniques such as least squares approximation and computational methods can be used in the analysis of logs and to take proactive actions when required. This paper explores methodologies and algorithms so as to develop an effective monitoring scheme against control aware cyber attacks. It also explains soft computation techniques such as the computational geometric method and least squares approximation that can be effective in monitor design. This paper provides insights into diagnostic monitoring of its effectiveness by attack simulations on a four-tank model and using computation techniques to diagnose it. Cyber security of instrumentation and control systems used in nuclear power plants is of paramount importance and hence could be a possible target of such applications

  2. Securing a cyber physical system in nuclear power plants using least square approximation and computational geometric approach

    Energy Technology Data Exchange (ETDEWEB)

    Gawand, Hemangi Laxman [Homi Bhabha National Institute, Computer Section, BARC, Mumbai (India); Bhattacharjee, A. K. [Reactor Control Division, BARC, Mumbai (India); Roy, Kallol [BHAVINI, Kalpakkam (India)

    2017-04-15

    In industrial plants such as nuclear power plants, system operations are performed by embedded controllers orchestrated by Supervisory Control and Data Acquisition (SCADA) software. A targeted attack (also termed a control aware attack) on the controller/SCADA software can lead a control system to operate in an unsafe mode or sometimes to complete shutdown of the plant. Such malware attacks can result in tremendous cost to the organization for recovery, cleanup, and maintenance activity. SCADA systems in operational mode generate huge log files. These files are useful in analysis of the plant behavior and diagnostics during an ongoing attack. However, they are bulky and difficult for manual inspection. Data mining techniques such as least squares approximation and computational methods can be used in the analysis of logs and to take proactive actions when required. This paper explores methodologies and algorithms so as to develop an effective monitoring scheme against control aware cyber attacks. It also explains soft computation techniques such as the computational geometric method and least squares approximation that can be effective in monitor design. This paper provides insights into diagnostic monitoring of its effectiveness by attack simulations on a four-tank model and using computation techniques to diagnose it. Cyber security of instrumentation and control systems used in nuclear power plants is of paramount importance and hence could be a possible target of such applications.

  3. Securing a Cyber Physical System in Nuclear Power Plants Using Least Square Approximation and Computational Geometric Approach

    Directory of Open Access Journals (Sweden)

    Hemangi Laxman Gawand

    2017-04-01

    Full Text Available In industrial plants such as nuclear power plants, system operations are performed by embedded controllers orchestrated by Supervisory Control and Data Acquisition (SCADA software. A targeted attack (also termed a control aware attack on the controller/SCADA software can lead a control system to operate in an unsafe mode or sometimes to complete shutdown of the plant. Such malware attacks can result in tremendous cost to the organization for recovery, cleanup, and maintenance activity. SCADA systems in operational mode generate huge log files. These files are useful in analysis of the plant behavior and diagnostics during an ongoing attack. However, they are bulky and difficult for manual inspection. Data mining techniques such as least squares approximation and computational methods can be used in the analysis of logs and to take proactive actions when required. This paper explores methodologies and algorithms so as to develop an effective monitoring scheme against control aware cyber attacks. It also explains soft computation techniques such as the computational geometric method and least squares approximation that can be effective in monitor design. This paper provides insights into diagnostic monitoring of its effectiveness by attack simulations on a four-tank model and using computation techniques to diagnose it. Cyber security of instrumentation and control systems used in nuclear power plants is of paramount importance and hence could be a possible target of such applications.

  4. Morphometric analysis of the Marmara Sea river basins, Turkey

    Science.gov (United States)

    Elbaşı, Emre; Ozdemir, Hasan

    2014-05-01

    The drainage basin, the fundamental unit of the fluvial landscape, has been focus of research aimed at understanding the geometric characteristics of the master channel and its tributary network. This geometry is referred to as the basin morphometry and is nicely reviewed by Abrahams (1984). A great amount of research has focused on geometric characteristic of drainage basins, including the topology of the stream networks, and quantitative description of drainage texture, pattern, shape, and relief characteristics. Evaluation of morphometric parameters necessitates the analysis of various drainage parameters such as ordering of the various streams, measurement of basin area and perimeter, length of drainage channels, drainage density (Dd), stream frequency (Fs), bifurcation ratio (Rb), texture ratio (T), basin relief (Bh), Ruggedness number (Rn), time of concentration (Tc), hypsometric curve and integral (Hc and Hi) (Horton, 1932, Schumn, 1956, Strahler, 1957; Verstappen 1983; Keller and Pinter, 2002; Ozdemir and Bird, 2009). These morphometric parameters have generally been used to predict flood peaks, to assess sediment yield, and to estimate erosion rates in the basins. River basins of the Marmara Sea, has an area of approximately 40,000 sqkm, are the most important basins in Turkey based on their dense populations, industry and transportation systems. The primary aim of this study is to determine and analyse of morphometric characteristics of the Marmara Sea river basins using 10 m resolution Digital Elevation Model (DEM) and to evaluate of the results. For these purposes, digital 10 m contour maps scaled 1:25000 and geological maps scaled 1:100000 were used as the main data sources in the study. 10 m resolution DEM data were created using the contour maps and then drainage networks and their watersheds were extracted using D8 pour point model. Finally, linear, areal and relief morphometries were applied to the river basins using Geographic Information Systems

  5. Mobile Watermarking against Geometrical Distortions

    Directory of Open Access Journals (Sweden)

    Jing Zhang

    2015-08-01

    Full Text Available Mobile watermarking robust to geometrical distortions is still a great challenge. In mobile watermarking, efficient computation is necessary because mobile devices have very limited resources due to power consumption. In this paper, we propose a low-complexity geometrically resilient watermarking approach based on the optimal tradeoff circular harmonic function (OTCHF correlation filter and the minimum average correlation energy Mellin radial harmonic (MACE-MRH correlation filter. By the rotation, translation and scale tolerance properties of the two kinds of filter, the proposed watermark detector can be robust to geometrical attacks. The embedded watermark is weighted by a perceptual mask which matches very well with the properties of the human visual system. Before correlation, a whitening process is utilized to improve watermark detection reliability. Experimental results demonstrate that the proposed watermarking approach is computationally efficient and robust to geometrical distortions.

  6. A geometric approach for fault detection and isolation of stator short circuit failure in a single asynchronous machine

    KAUST Repository

    Khelouat, Samir; Benalia, Atallah; Boukhetala, Djamel; Laleg-Kirati, Taous-Meriem

    2012-01-01

    in nonlinear systems, we will study some structural properties which are fault detectability and isolation fault filter existence. We will then design filters for residual generation. We will consider two approaches: a two-filters structure and a single filter

  7. Geometric inequalities methods of proving

    CERN Document Server

    Sedrakyan, Hayk

    2017-01-01

    This unique collection of new and classical problems provides full coverage of geometric inequalities. Many of the 1,000 exercises are presented with detailed author-prepared-solutions, developing creativity and an arsenal of new approaches for solving mathematical problems. This book can serve teachers, high-school students, and mathematical competitors. It may also be used as supplemental reading, providing readers with new and classical methods for proving geometric inequalities. .

  8. Geometrical size effect in high cycle fatigue strength of heavy-walled Ductile Cast Iron GJS400: Weakest link vs. defect-based approach

    Directory of Open Access Journals (Sweden)

    Cova Matteo

    2014-06-01

    Full Text Available Fatigue strength is known to decrease with increasing dimension of the component. This is due to a technological size effect, related to the production process, and to a geometrical size effect, due to a higher probability of finding a large defect. To investigate the latter, an heavy-walled component made of Ductile Cast Iron (DCI has been trepanned and a fatigue test plan has been carried out using 4 different specimen geometries. An attempt has been made to relate the resulting fatigue strength using a weakest-link approach based on the effective volumes and surfaces. This approach seems to work well only in cases of different specimen's lengths. Some of the fracture surfaces were analyzed by means of SEM and the initiating defects were identified and measured. An approach in which the defects population can be randomly distributed in the specimen has been tried. Virtual fatigue tests have been carried out by considering pure propagation of the worst defect. The resulting fatigue curves showed that this approach is promising but needs further description of the initiation phase.

  9. Geometric leaf placement strategies

    International Nuclear Information System (INIS)

    Fenwick, J D; Temple, S W P; Clements, R W; Lawrence, G P; Mayles, H M O; Mayles, W P M

    2004-01-01

    Geometric leaf placement strategies for multileaf collimators (MLCs) typically involve the expansion of the beam's-eye-view contour of a target by a uniform MLC margin, followed by movement of the leaves until some point on each leaf end touches the expanded contour. Film-based dose-distribution measurements have been made to determine appropriate MLC margins-characterized through an index d 90 -for multileaves set using one particular strategy to straight lines lying at various angles to the direction of leaf travel. Simple trigonometric relationships exist between different geometric leaf placement strategies and are used to generalize the results of the film work into d 90 values for several different strategies. Measured d 90 values vary both with angle and leaf placement strategy. A model has been derived that explains and describes quite well the observed variations of d 90 with angle. The d 90 angular variations of the strategies studied differ substantially, and geometric and dosimetric reasoning suggests that the best strategy is the one with the least angular variation. Using this criterion, the best straightforwardly implementable strategy studied is a 'touch circle' approach for which semicircles are imagined to be inscribed within leaf ends, the leaves being moved until the semicircles just touch the expanded target outline

  10. Geoinformatics for assessing the morphometric control on ...

    Indian Academy of Sciences (India)

    natural disasters are one of the serious geo-hazards, ... Natural features such as land use and land cover, soil and .... steps followed for the generation of morphometric ... language. Infiltration number. Area, perimeter, basin length, min & max.

  11. On bivariate geometric distribution

    Directory of Open Access Journals (Sweden)

    K. Jayakumar

    2013-05-01

    Full Text Available Characterizations of bivariate geometric distribution using univariate and bivariate geometric compounding are obtained. Autoregressive models with marginals as bivariate geometric distribution are developed. Various bivariate geometric distributions analogous to important bivariate exponential distributions like, Marshall-Olkin’s bivariate exponential, Downton’s bivariate exponential and Hawkes’ bivariate exponential are presented.

  12. Visualizing the Geometric Series.

    Science.gov (United States)

    Bennett, Albert B., Jr.

    1989-01-01

    Mathematical proofs often leave students unconvinced or without understanding of what has been proved, because they provide no visual-geometric representation. Presented are geometric models for the finite geometric series when r is a whole number, and the infinite geometric series when r is the reciprocal of a whole number. (MNS)

  13. DNA immunisation. New histochemical and morphometric data

    Directory of Open Access Journals (Sweden)

    D Ehirchiou

    2010-01-01

    Full Text Available Splenic germinal center reactions were measured during primary response to a plasmidic DNA intramuscular injection. Cardiotoxin-pretreated Balb/c mice were immunized with DNA plasmids encoding or not the SAG1 protein, a membrane antigen of Toxoplasma gondii. Specific anti-SAG1 antibodies were detected on days 16 and 36 after injection of coding plasmids. The results of ELISAs showed that the SAG1-specific antibodies are of the IgG2a class. Morphometric analyses were done on serial immunostained cryosections of spleen and draining or non-draining lymph nodes. This new approach made it possible to evaluate the chronological changes induced by DNA immunisation in the germinal centres (in number and in size. Significant increases in the number of germinal centres were measured in the spleen and only in draining lymph nodes after plasmid injection. the measured changes of the germinal centers appeared to result from the adjuvant stimulatory effect of the plasmidic DNA since both the coding and the noncoding plasmid DNA induced them. No measurable changes were recorded in the Tdependent zone of lymph organs.

  14. A geometrical approach for semi-automated crystal centering and in situ X-ray diffraction data collection

    International Nuclear Information System (INIS)

    Mohammad Yaser Heidari Khajepour; Ferrer, Jean-Luc; Lebrette, Hugo; Vernede, Xavier; Rogues, Pierrick

    2013-01-01

    High-throughput protein crystallography projects pushed forward the development of automated crystallization platforms that are now commonly used. This created an urgent need for adapted and automated equipment for crystal analysis. However, first these crystals have to be harvested, cryo-protected and flash-cooled, operations that can fail or negatively impact on the crystal. In situ X-ray diffraction analysis has become a valid alternative to these operations, and a growing number of users apply it for crystal screening and to solve structures. Nevertheless, even this shortcut may require a significant amount of beam time. In this in situ high-throughput approach, the centering of crystals relative to the beam represents the bottleneck in the analysis process. In this article, a new method to accelerate this process, by recording accurately the local geometry coordinates for each crystal in the crystallization plate, is presented. Subsequently, the crystallization plate can be presented to the X-ray beam by an automated plate-handling device, such as a six-axis robot arm, for an automated crystal centering in the beam, in situ screening or data collection. Here the preliminary results of such a semi-automated pipeline are reported for two distinct test proteins. (authors)

  15. A combined morphometric analysis of foot form and its association with sex, stature, and body mass.

    Science.gov (United States)

    Domjanic, Jacqueline; Seidler, Horst; Mitteroecker, Philipp

    2015-08-01

    Morphometric analysis of footprints is a classic means for orthopedic diagnosis. In forensics and physical anthropology, it is commonly used for the estimation of stature and body mass. We studied individual variation and sexual dimorphism of foot dimensions and footprint shape by a combination of classic foot measurements and geometric morphometric methods. Left and right feet of 134 healthy adult males and females were scanned twice with a 3D optical laser scanner, and stature as well as body mass were recorded. Foot length and width were measured on the 3D scans. The 2D footprints were extracted as the plantar-most 2 mm of the 3D scans and measured with 85 landmarks and semilandmarks. Both foot size and footprint shape are sexually dimorphic and relate to stature and body mass. While dimorphism in foot length largely results from dimorphism in stature, dimorphism in footprint shape partly owes to the dimorphism in BMI. Stature could be estimated well based on foot length (R(2)  = 0.76), whereas body mass was more closely related to foot width (R(2)  = 0.62). Sex could be estimated correctly for 95% of the individuals based on a combination of foot width and length. Geometric morphometrics proved to be an effective tool for the detailed analysis of footprint shape. However, for the estimation of stature, body mass, and sex, shape variables did not considerably improve estimates based on foot length and width. © 2015 Wiley Periodicals, Inc.

  16. Geometric Design Laboratory

    Data.gov (United States)

    Federal Laboratory Consortium — Purpose: The mission of the Geometric Design Laboratory (GDL) is to support the Office of Safety Research and Development in research related to the geometric design...

  17. Geometrical approach to elementary particles

    International Nuclear Information System (INIS)

    Elbaz, E.; Meyer, J.

    Starting with an isospin doublet R = (T/V) with spin 1/2 and hypercharge 1/3, the rishon considered as a vector in the color-space, we define the dirishon R* rank-one tensor product with spin 0 and hypercharge 2/3. Leptons and quarks of the first generation are then obtained as the scalar and dot product l = R*. R and f vector = R* Λ R'. The internal quantum numbers are then expressed with the rishon number. The lepton and quark generations are then defined and a quark mass formula proposed. Baryon magnetic moments are calculated and compared to experiment [fr

  18. Morphometric evaluation of Arbor Acre parent stock broilers reared ...

    African Journals Online (AJOL)

    Morphometric evaluation of Arbor Acre parent stock broilers reared in ... Economic importance of morphometric parameters such as live weight and body ... (R2) value of 60.30 included forecast indices such as BL, WS, WL, TL, BG and SL.

  19. Vergence, Vision, and Geometric Optics

    Science.gov (United States)

    Keating, Michael P.

    1975-01-01

    Provides a definition of vergence in terms of the curvature of the wave fronts, and gives examples to illustrate the advantages of this approach. The vergence treatment of geometrical optics provides both conceptual and algebraic advantages, particularly for the life science student, over the traditional object distance-image distance-focal length…

  20. Asymptotic geometric analysis, part I

    CERN Document Server

    Artstein-Avidan, Shiri

    2015-01-01

    The authors present the theory of asymptotic geometric analysis, a field which lies on the border between geometry and functional analysis. In this field, isometric problems that are typical for geometry in low dimensions are substituted by an "isomorphic" point of view, and an asymptotic approach (as dimension tends to infinity) is introduced. Geometry and analysis meet here in a non-trivial way. Basic examples of geometric inequalities in isomorphic form which are encountered in the book are the "isomorphic isoperimetric inequalities" which led to the discovery of the "concentration phenomen

  1. Geometrization of quantum physics

    International Nuclear Information System (INIS)

    Ol'khov, O.A.

    2009-01-01

    It is shown that the Dirac equation for a free particle can be considered as a description of specific distortion of the space Euclidean geometry (space topological defect). This approach is based on the possibility of interpretation of the wave function as vector realizing representation of the fundamental group of the closed topological space-time 4-manifold. Mass and spin appear to be topological invariants. Such a concept explains all so-called 'strange' properties of quantum formalism: probabilities, wave-particle duality, nonlocal instantaneous correlation between noninteracting particles (EPR-paradox) and so on. Acceptance of the suggested geometrical concept means rejection of atomistic concept where all matter is considered as consisting of more and more small elementary particles. There are no any particles a priory, before measurement: the notions of particles appear as a result of classical interpretation of the contact of the region of the curved space with a device

  2. Geometrization of quantum physics

    Science.gov (United States)

    Ol'Khov, O. A.

    2009-12-01

    It is shown that the Dirac equation for free particle can be considered as a description of specific distortion of the space euclidean geometry (space topological defect). This approach is based on possibility of interpretation of the wave function as vector realizing representation of the fundamental group of the closed topological space-time 4-manifold. Mass and spin appear to be topological invariants. Such concept explains all so called “strange” properties of quantum formalism: probabilities, wave-particle duality, nonlocal instantaneous correlation between noninteracting particles (EPR-paradox) and so on. Acceptance of suggested geometrical concept means rejection of atomistic concept where all matter is considered as consisting of more and more small elementary particles. There is no any particles a priori, before measurement: the notions of particles appear as a result of classical interpretation of the contact of the region of the curved space with a device.

  3. Morphometric synaptology of a whole neuron profile using a semiautomatic interactive computer system.

    Science.gov (United States)

    Saito, K; Niki, K

    1983-07-01

    We propose a new method of dealing with morphometric synaptology that processes all synapses and boutons around the HRP marked neuron on a large composite electron micrograph, rather than a qualitative or a piecemeal quantitative study of a particular synapse and/or bouton that is not positioned on the surface of the neuron. This approach requires the development of both neuroanatomical procedures, by which a specific whole neuronal profile is identified, and valuable specialized tools, which support the collection and analysis of a great volume of morphometric data from composite electron micrographs, in order to reduce the burden of the morphologist. The present report is also concerned with the total and reliable semi-automatic interactive computer system for gathering and analyzing morphometric data that has been under development in our laboratory. A morphologist performs the pattern recognition portion by using a large-sized tablet digitizer and a menu-sheet command, and the system registers the various morphometric values of many different neurons and performs statistical analysis. Some examples of morphometric measurements and analysis show the usefulness and efficiency of the proposed system and method.

  4. Morphometric analysis of chameleon fossil fragments from the Early Pliocene of South Africa: a new piece of the chamaeleonid history.

    Science.gov (United States)

    Dollion, Alexis Y; Cornette, Raphaël; Tolley, Krystal A; Boistel, Renaud; Euriat, Adelaïde; Boller, Elodie; Fernandez, Vincent; Stynder, Deano; Herrel, Anthony

    2015-02-01

    The evolutionary history of chameleons has been predominantly studied through phylogenetic approaches as the fossil register of chameleons is limited and fragmented. The poor state of preservation of these fossils has moreover led to the origin of numerous nomen dubia, and the identification of many chameleon fossils remains uncertain. We here examine chameleon fossil fragments from the Early Pliocene Varswater formation, exposed at the locality of Langebaanweg "E" Quarry along the southwestern coast of South Africa. Our aim was to explore whether these fossil fragments could be assigned to extant genera. To do so, we used geometric morphometric approaches based on microtomographic imaging of extant chameleons as well as the fossil fragments themselves. Our study suggests that the fossils from this deposit most likely represent at least two different forms that may belong to different genera. Most fragments are phenotypically dissimilar from the South African endemic genus Bradypodion and are more similar to other chameleon genera such as Trioceros or Kinyongia. However, close phenetic similarities between some of the fragments and the Seychelles endemic Archaius or the Madagascan genus Furcifer suggest that some of these fragments may not contain enough genus-specific information to allow correct identification. Other fragments such as the parietal fragments appear to contain more genus-specific information, however. Although our data suggest that the fossil diversity of chameleons in South Africa was potentially greater than it is today, this remains to be verified based on other and more complete fragments.

  5. Operational geometric phase for mixed quantum states

    International Nuclear Information System (INIS)

    Andersson, O; Heydari, H

    2013-01-01

    The geometric phase has found a broad spectrum of applications in both classical and quantum physics, such as condensed matter and quantum computation. In this paper, we introduce an operational geometric phase for mixed quantum states, based on spectral weighted traces of holonomies, and we prove that it generalizes the standard definition of the geometric phase for mixed states, which is based on quantum interferometry. We also introduce higher order geometric phases, and prove that under a fairly weak, generically satisfied, requirement, there is always a well-defined geometric phase of some order. Our approach applies to general unitary evolutions of both non-degenerate and degenerate mixed states. Moreover, since we provide an explicit formula for the geometric phase that can be easily implemented, it is particularly well suited for computations in quantum physics. (paper)

  6. Morphometric Characterization of Small Cell Lymphocytic Lymphoma

    Directory of Open Access Journals (Sweden)

    Chisoi Anca

    2014-11-01

    Full Text Available The morphometry in histopathology is used to characterize cell populations belonging to different tissues and to identify differences in their parameters with prognostic implications. To achieve morphometric examination were selected 6 of 24 cases identified as small cell lymphocytic lymphoma. For each case analysis was done on five fields, for each field measuring the parameters of 20 cells. The studied parameters were for cytoplasm: cytoplasmic area, maximum and minimum cytoplasmic diameter, cytoplasmic perimeter; for nucleus were measured: nuclear area, minimum and maximum nuclear diameter, nuclear perimeter, nuclear contour index, nuclear ellipticity index, nuclear irregularity index. Also the nucleocytoplasmic ratio was calculated in all studied cases. Small cell lymphocytic lymphoma is characterized in morphometric terms having a small cytoplasmic area (average 29.206 and also a small nuclear area (mean 28.939 having a nucleo-cytoplasmic ratio appearance suggestive for adult lymphocyte. A nuclear contour index small value (3.946, ellipticity index value also small (3.521 and small nuclear irregularity index (3.965. Standard deviations, in any of the studied morphometric categories, is around or below 1 suggesting monomorphic cell appearance. These morphometric and microscopic features characterized mainly by a small population of adult lymphocytes, monomorphic, with rounded hipercromic nuclei, dense chromatin, support the framing into indolent lymphoma group in terms of clinical outcome.

  7. Morphometric study of Euchiton (Gnaphalieae: Asteraceae)

    NARCIS (Netherlands)

    Flann, C.M.

    2010-01-01

    A morphometric study was undertaken to survey taxa in the genus Euchiton Cass., distributed across Australia, New Zealand and South-east Asia. Phenetic analyses of herbarium specimens showed several taxa to be well delimited, including E. brassii (Mattf.) Anderb., E. breviscapus (Mattf.) Anderb., E.

  8. Retrospective Morphometric Analysis of the Infraorbital Foramen ...

    African Journals Online (AJOL)

    Objective: The aim of our study is to examine the morphometric characteristics of the infraorbital foramen (IOF) and its anatomic localization by using conebeam computerized tomography (CBCT). Materials and Methods: In our study, the anatomic characteristics of the IOF were identified by studying retrospectively the CBCT ...

  9. Topological data analysis as a morphometric method: using persistent homology to demarcate a leaf morphospace

    Science.gov (United States)

    Current morphometric methods that comprehensively measure shape cannot compare the disparate leaf shapes found in flowering plants and are sensitive to processing artifacts. Here we describe a persistent homology approach to measuring shape. Persistent homology is a topological method (concerned wit...

  10. Morphometric Assessment of Convergent Tool Technology and Function during the Early Middle Palaeolithic: The Case of Payre, France.

    Directory of Open Access Journals (Sweden)

    M Gema Chacón

    Full Text Available There appears to be little doubt as to the existence of an intentional technological resolve to produce convergent tools during the Middle Palaeolithic. However, the use of these pieces as pointed tools is still subject to debate: i.e., handheld tool vs. hafted tool. Present-day technological analysis has begun to apply new methodologies in order to quantify shape variability and to decipher the role of the morphology of these pieces in relation to function; for instance, geometric morphometric analyses have recently been applied with successful results. This paper presents a study of this type of analysis on 37 convergent tools from level Ga of Payre site (France, dated to MIS 8-7. These pieces are non-standardized knapping products produced by discoidal and orthogonal core technologies. Moreover, macro-wear studies attest to various activities on diverse materials with no evidence of hafting or projectile use. The aim of this paper is to test the geometric morphometric approach on non-standardized artefacts applying the Elliptical Fourier analysis (EFA to 3D contours and to assess the potential relationship between size and shape, technology and function. This study is innovative in that it is the first time that this method, considered to be a valuable complement for describing technological and functional attributes, is applied to 3D contours of lithic products. Our results show that this methodology ensures a very good degree of accuracy in describing shape variations of the sharp edges of technologically non-standardized convergent tools. EFA on 3D contours indicates variations in deviations of the outline along the third dimension (i.e., dorso-ventrally and yields quantitative and insightful information on the actual shape variations of tools. Several statistically significant relationships are found between shape variation and use-wear attributes, though the results emphasize the large variability of the shape of the convergent tools

  11. Morphometric Assessment of Convergent Tool Technology and Function during the Early Middle Palaeolithic: The Case of Payre, France.

    Science.gov (United States)

    Chacón, M Gema; Détroit, Florent; Coudenneau, Aude; Moncel, Marie-Hélène

    2016-01-01

    There appears to be little doubt as to the existence of an intentional technological resolve to produce convergent tools during the Middle Palaeolithic. However, the use of these pieces as pointed tools is still subject to debate: i.e., handheld tool vs. hafted tool. Present-day technological analysis has begun to apply new methodologies in order to quantify shape variability and to decipher the role of the morphology of these pieces in relation to function; for instance, geometric morphometric analyses have recently been applied with successful results. This paper presents a study of this type of analysis on 37 convergent tools from level Ga of Payre site (France), dated to MIS 8-7. These pieces are non-standardized knapping products produced by discoidal and orthogonal core technologies. Moreover, macro-wear studies attest to various activities on diverse materials with no evidence of hafting or projectile use. The aim of this paper is to test the geometric morphometric approach on non-standardized artefacts applying the Elliptical Fourier analysis (EFA) to 3D contours and to assess the potential relationship between size and shape, technology and function. This study is innovative in that it is the first time that this method, considered to be a valuable complement for describing technological and functional attributes, is applied to 3D contours of lithic products. Our results show that this methodology ensures a very good degree of accuracy in describing shape variations of the sharp edges of technologically non-standardized convergent tools. EFA on 3D contours indicates variations in deviations of the outline along the third dimension (i.e., dorso-ventrally) and yields quantitative and insightful information on the actual shape variations of tools. Several statistically significant relationships are found between shape variation and use-wear attributes, though the results emphasize the large variability of the shape of the convergent tools, which, in general

  12. ADJUSTMENT OF MORPHOMETRIC PARAMETERS OF WATER BASINS BASED ON DIGITAL TERRAIN MODELS

    Directory of Open Access Journals (Sweden)

    Krasil'nikov Vitaliy Mikhaylovich

    2012-10-01

    Full Text Available The authors argue that effective use of water resources requires accurate morphometric characteristics of water basins. Accurate parameters are needed to analyze their condition, and to assure their appropriate control and operation. Today multiple water basins need their morphometric characteristics to be adjusted and properly stored. The procedure employed so far is based on plane geometric horizontals depicted onto topographic maps. It is described in the procedural guidelines issued in respect of the «Application of water resource regulations governing the operation of waterworks facilities of power plants». The technology described there is obsolete due to the availability of specialized software. The computer technique is based on a digital terrain model. The authors provide an overview of the technique implemented at Rybinsk and Gorkiy water basins in this article. Thus, the digital terrain model generated on the basis of the field data is used at Gorkiy water basin, while the model based on maps and charts is applied at Rybinsk water basin. The authors believe that the software technique can be applied to any other water basin on the basis of the analysis and comparison of morphometric characteristics of the two water basins.

  13. Geometrical methods in learning theory

    International Nuclear Information System (INIS)

    Burdet, G.; Combe, Ph.; Nencka, H.

    2001-01-01

    The methods of information theory provide natural approaches to learning algorithms in the case of stochastic formal neural networks. Most of the classical techniques are based on some extremization principle. A geometrical interpretation of the associated algorithms provides a powerful tool for understanding the learning process and its stability and offers a framework for discussing possible new learning rules. An illustration is given using sequential and parallel learning in the Boltzmann machine

  14. Host plant affects morphometric variation of Diaphorina citri (Hemiptera: Liviidae

    Directory of Open Access Journals (Sweden)

    Thomson M. Paris

    2016-11-01

    Full Text Available The Asian citrus psyllid (ACP, Diaphorina citri Kuwayama, is one of the most serious citrus pests worldwide due to its role as vector of huanglongbing or citrus greening disease. While some optimal plant species for ACP oviposition and development have been identified, little is known of the influence of host plants on ACP size and shape. Our goal was to determine how size and shape of ACP wing and body size varies when development occurs on different host plants in a controlled rearing environment. ACP were reared on six different rutaceous species; Bergera koenigii, Citrus aurantifolia, Citrus macrophylla, Citrus maxima, Citrus taiwanica and Murraya paniculata. Adults were examined for morphometric variation using traditional and geometric analysis based on 12 traits or landmarks. ACP reared on C. taiwanica were consistently smaller than those reared on the other plant species. Wing aspect ratio also differed between C. maxima and C. taiwanica. Significant differences in shape were detected with those reared on M. paniculata having narrower wings than those reared on C. macrophylla. This study provides evidence of wing size and shape differences of ACP based on host plant species which potentially may impact dispersal. Further study is needed to determine if behavioral and physiological differences are associated with the observed phenotypic differences.

  15. Host plant affects morphometric variation of Diaphorina citri (Hemiptera: Liviidae).

    Science.gov (United States)

    Paris, Thomson M; Allan, Sandra A; Hall, David G; Hentz, Matthew G; Hetesy, Gabriella; Stansly, Philip A

    2016-01-01

    The Asian citrus psyllid (ACP), Diaphorina citri Kuwayama, is one of the most serious citrus pests worldwide due to its role as vector of huanglongbing or citrus greening disease. While some optimal plant species for ACP oviposition and development have been identified, little is known of the influence of host plants on ACP size and shape. Our goal was to determine how size and shape of ACP wing and body size varies when development occurs on different host plants in a controlled rearing environment. ACP were reared on six different rutaceous species; Bergera koenigii , Citrus aurantifolia , Citrus macrophylla , Citrus maxima , Citrus taiwanica and Murraya paniculata . Adults were examined for morphometric variation using traditional and geometric analysis based on 12 traits or landmarks. ACP reared on C. taiwanica were consistently smaller than those reared on the other plant species. Wing aspect ratio also differed between C. maxima and C. taiwanica . Significant differences in shape were detected with those reared on M. paniculata having narrower wings than those reared on C. macrophylla . This study provides evidence of wing size and shape differences of ACP based on host plant species which potentially may impact dispersal. Further study is needed to determine if behavioral and physiological differences are associated with the observed phenotypic differences.

  16. Reproducibility of morphometric X-ray absorptiometry

    International Nuclear Information System (INIS)

    Culton, N.; Pocock, N.

    1999-01-01

    Full text: Morphometric X-ray absorptiometry (MXA) using DXA is potentially a useful clinical tool which may provide additional vertebral fracture information with low radiation exposure. While morphometric analysis is semi-automated, operator intervention is crucial for the accurate positioning of the six data points quantifying the vertebral heights at the anterior, middle and posterior positions. Our study evaluated intra-operator reproducibility of MXA in an elderly patient population and assessed the effect of training and experience on vertebral height precision. Ten patients, with a mean lumbar T score of - 2.07, were studied. Images were processed by a trained operator who had initially only limited morphometric experience. The analysis of the data files were repeated at 2 and 6 weeks, during which time the operator had obtained further experience and training. The intra-operator precision of vertebral height measurements was calculated using the three separate combinations of paired analyses, and expressed as the coefficient of variation. This study confirms the importance of adequate training and attention to detail in MXA analysis. The data indicate that the precision of MXA is adequate for its use in the diagnosis of vertebral fractures, based on a 20% deformity criteria. Use of MXA for monitoring would require approximately an 8% change in vertebral heights to achieve statistical significance

  17. Effects of Temperature, Photoperiod, and Rainfall on Morphometric Variation of Diaphorina citri (Hemiptera: Liviidae).

    Science.gov (United States)

    Paris, Thomson M; Allan, Sandra A; Hall, David G; Hentz, Matthew G; Croxton, Scott D; Ainpudi, Niharika; Stansly, Philip A

    2017-02-01

    Phenotypic plasticity provides a mechanism by which an organism can adapt to new or changing environments. Earlier studies have demonstrated the variability of Diaphorina citri Kuwayama (Asian citrus psyllid) population dynamics, but no analysis of morphological changes induced by seasonal or artificial laboratory-induced conditions has yet been documented. Such morphometric variation has been found to correspond in dispersal capabilities in several insect taxa. In this study, the effects of temperature and photoperiod on morphometric variation of D. citri were examined through laboratory rearing of psyllids under controlled temperatures (20 °C, 28 °C, and 30 °C) and under a short photoperiod of 10.5:13.5 (L:D) h and a long photoperiod of 16:8 (L:D) h. Diaphorina citri were field-collected monthly from three citrus groves in Fort Pierce, Gainesville, and Immokalee, FL, to evaluate potential field-associated environmental effects. Both traditional and geometric morphometric data were used to analyze the correlation between environmental and morphometric variation. A strong correlation was found between temperature and shape change, with larger and broader wings at colder temperatures in the laboratory. Short day length resulted in shorter and narrower wings as well. From the field, temperature, rainfall, and photoperiod were moderately associated with shape parameters. Adult D. citri with blue/green abdomens collected in the laboratory and field studies were larger in size and shape than those with brown/gray abdomens. Published by Oxford University Press on behalf of Entomological Society of America 2016. This work is written by US Government employees and is in the public domain in the US.

  18. Geometric mean for subspace selection.

    Science.gov (United States)

    Tao, Dacheng; Li, Xuelong; Wu, Xindong; Maybank, Stephen J

    2009-02-01

    Subspace selection approaches are powerful tools in pattern classification and data visualization. One of the most important subspace approaches is the linear dimensionality reduction step in the Fisher's linear discriminant analysis (FLDA), which has been successfully employed in many fields such as biometrics, bioinformatics, and multimedia information management. However, the linear dimensionality reduction step in FLDA has a critical drawback: for a classification task with c classes, if the dimension of the projected subspace is strictly lower than c - 1, the projection to a subspace tends to merge those classes, which are close together in the original feature space. If separate classes are sampled from Gaussian distributions, all with identical covariance matrices, then the linear dimensionality reduction step in FLDA maximizes the mean value of the Kullback-Leibler (KL) divergences between different classes. Based on this viewpoint, the geometric mean for subspace selection is studied in this paper. Three criteria are analyzed: 1) maximization of the geometric mean of the KL divergences, 2) maximization of the geometric mean of the normalized KL divergences, and 3) the combination of 1 and 2. Preliminary experimental results based on synthetic data, UCI Machine Learning Repository, and handwriting digits show that the third criterion is a potential discriminative subspace selection method, which significantly reduces the class separation problem in comparing with the linear dimensionality reduction step in FLDA and its several representative extensions.

  19. Geometric group theory

    CERN Document Server

    Druţu, Cornelia

    2018-01-01

    The key idea in geometric group theory is to study infinite groups by endowing them with a metric and treating them as geometric spaces. This applies to many groups naturally appearing in topology, geometry, and algebra, such as fundamental groups of manifolds, groups of matrices with integer coefficients, etc. The primary focus of this book is to cover the foundations of geometric group theory, including coarse topology, ultralimits and asymptotic cones, hyperbolic groups, isoperimetric inequalities, growth of groups, amenability, Kazhdan's Property (T) and the Haagerup property, as well as their characterizations in terms of group actions on median spaces and spaces with walls. The book contains proofs of several fundamental results of geometric group theory, such as Gromov's theorem on groups of polynomial growth, Tits's alternative, Stallings's theorem on ends of groups, Dunwoody's accessibility theorem, the Mostow Rigidity Theorem, and quasiisometric rigidity theorems of Tukia and Schwartz. This is the f...

  20. Geometric and engineering drawing

    CERN Document Server

    Morling, K

    2010-01-01

    The new edition of this successful text describes all the geometric instructions and engineering drawing information that are likely to be needed by anyone preparing or interpreting drawings or designs with plenty of exercises to practice these principles.

  1. Differential geometric structures

    CERN Document Server

    Poor, Walter A

    2007-01-01

    This introductory text defines geometric structure by specifying parallel transport in an appropriate fiber bundle and focusing on simplest cases of linear parallel transport in a vector bundle. 1981 edition.

  2. Geometric ghosts and unitarity

    International Nuclear Information System (INIS)

    Ne'eman, Y.

    1980-09-01

    A review is given of the geometrical identification of the renormalization ghosts and the resulting derivation of Unitarity equations (BRST) for various gauges: Yang-Mills, Kalb-Ramond, and Soft-Group-Manifold

  3. On geometrized gravitation theories

    International Nuclear Information System (INIS)

    Logunov, A.A.; Folomeshkin, V.N.

    1977-01-01

    General properties of the geometrized gravitation theories have been considered. Geometrization of the theory is realized only to the extent that by necessity follows from an experiment (geometrization of the density of the matter Lagrangian only). Aor a general case the gravitation field equations and the equations of motion for matter are formulated in the different Riemann spaces. A covariant formulation of the energy-momentum conservation laws is given in an arbitrary geometrized theory. The noncovariant notion of ''pseudotensor'' is not required in formulating the conservation laws. It is shown that in the general case (i.e., when there is an explicit dependence of the matter Lagrangian density on the covariant derivatives) a symmetric energy-momentum tensor of the matter is explicitly dependent on the curvature tensor. There are enlisted different geometrized theories that describe a known set of the experimental facts. The properties of one of the versions of the quasilinear geometrized theory that describes the experimental facts are considered. In such a theory the fundamental static spherically symmetrical solution has a singularity only in the coordinate origin. The theory permits to create a satisfactory model of the homogeneous nonstationary Universe

  4. Geometrical analysis of the interacting boson model

    International Nuclear Information System (INIS)

    Dieperink, A.E.L.

    1983-01-01

    The Interacting Boson Model is considered, in relation with geometrical models and the application of mean field techniques to algebraic models, in three lectures. In the first, several methods are reviewed to establish a connection between the algebraic formulation of collective nuclear properties in terms of the group SU(6) and the geometric approach. In the second lecture the geometric interpretation of new degrees of freedom that arise in the neutron-proton IBA is discussed, and in the third one some further applications of algebraic techniques to the calculation of static and dynamic collective properties are presented. (U.K.)

  5. Morphometric analysis of the arteries of Willis Polygon

    Directory of Open Access Journals (Sweden)

    Canaz Huseyin

    2018-03-01

    Full Text Available Objective: Willis polygon forms the basis of the arterial circulation of the cerebrum. Willis polygon is a vascular structure whom variations are not rare. Knowledge of the anatomy and preservation of its integrity is crucial for performing neurovascular surgery and intracranial tumour surgery. Because of the important vascular and neurological structures, approaches to this region are considered extremely risky. One of the main variations in-person basis is the diameter differences of the arteries, which forms Willis polygon, between the left and right hemispheres. About structure and variations, studies of Rhoton and Yasargil had formed the touchstone. Our aim is to contribute to the literature and clinical studies, to be done in the future, by comparing our results with previous studies about variations and morphometric features of Willis polygon.

  6. The geometric semantics of algebraic quantum mechanics.

    Science.gov (United States)

    Cruz Morales, John Alexander; Zilber, Boris

    2015-08-06

    In this paper, we will present an ongoing project that aims to use model theory as a suitable mathematical setting for studying the formalism of quantum mechanics. We argue that this approach provides a geometric semantics for such a formalism by means of establishing a (non-commutative) duality between certain algebraic and geometric objects. © 2015 The Author(s) Published by the Royal Society. All rights reserved.

  7. The SPICE concept - An approach to providing geometric and other ancillary information needed for interpretation of data returned from space science instruments

    Science.gov (United States)

    Acton, Charles H., Jr.

    1990-01-01

    The Navigation Ancillary Information Facility (NAIF), acting under the direction of NASA's Office of Space Science and Applications, and with substantial participation of the planetary science community, is designing and implementing an ancillary data system - called SPICE - to assist scientists in planning and interpreting scientific observations taken from spaceborne instruments. The principal objective of the implemented SPICE system is that it will hold the essential geometric and related ancillary information needed to recover the full value of science instrument data, and that it will facilitate correlations of individual instrument datasets with data obtained from other instruments on the same or other spacecraft.

  8. STUDY OF MORPHOMETRIC CHANGES OF FOETAL STOMACH

    Directory of Open Access Journals (Sweden)

    Mohammed Aneesur Rahman

    2017-07-01

    Full Text Available BACKGROUND Interest in human development is very widespread largely because of the curiosity about our beginnings and desire to improve the quality of life. Understanding of the processes involved in the formation of various organs and systems has unrevealed most cryptic secrets of the nature. Human development begins at fertilisation when a male gamete or sperm unites with a female gamete or oocyte to form a single cell, a zygote. With the formation of zygote (single-celled stage, foetal development begins. The aim of the study is to- 1 Study the morphometric parameters of foetal stomach at various gestational ages. 2 Compare these observations with the previous studies. MATERIALS AND METHODS Present work was the cross-sectional study carried out in the Department of Anatomy in collaboration with the Department of Obstetrics and Gynaecology at SRTRGMC and Hospital, Ambajogai Dist., Beed, Maharashtra. For this, approval of Institutional Ethical Committee was taken. 30 aborted human foetuses of different age groups ranging from 12 to 36 weeks of fertilisation were taken from the Department of OB-GYN. Foetuses were preserved by using 10% formalin. Age of foetuses were determined by crown-rump length and history given by mother. Foetuses were dissected after preservation for 15 days and morphometric studies were done on stomach. RESULTS Various quantitative parameters like weight of foetus, crown-rump length, total length of stomach, weight of stomach, length of greater curvature, lesser curvature, width of cardia and width of pylorus were used. For the purpose of study and comparison with other researchers, the foetuses were divided into 3 groups. Morphometric changes were observed in different groups and compared with previous studies. CONCLUSION With the increase in the body weight, crown-rump length and gestational age of the foetus, there is gradual increase on various parameters of stomach.

  9. Geometrical methods for power network analysis

    Energy Technology Data Exchange (ETDEWEB)

    Bellucci, Stefano; Tiwari, Bhupendra Nath [Istituto Nazioneale di Fisica Nucleare, Frascati, Rome (Italy). Lab. Nazionali di Frascati; Gupta, Neeraj [Indian Institute of Technology, Kanpur (India). Dept. of Electrical Engineering

    2013-02-01

    Uses advanced geometrical methods to analyse power networks. Provides a self-contained and tutorial introduction. Includes a fully worked-out example for the IEEE 5 bus system. This book is a short introduction to power system planning and operation using advanced geometrical methods. The approach is based on well-known insights and techniques developed in theoretical physics in the context of Riemannian manifolds. The proof of principle and robustness of this approach is examined in the context of the IEEE 5 bus system. This work addresses applied mathematicians, theoretical physicists and power engineers interested in novel mathematical approaches to power network theory.

  10. Morphometric Analysis of Didessa River Catchment in Blue Nile ...

    African Journals Online (AJOL)

    Morphometric Analysis of Didessa River Catchment in Blue Nile Basin, Western Ethiopia. ... In the present paper an attempt has been made to study the morphometric characteristics of Didessa ... Stream networks and watersheds were delineated in ArcGIS 10.1 software environment by utilizing ... HOW TO USE AJOL.

  11. MORPHOMETRICAL PARAMETERS OF GUT MICROFLORA IN HUMAN VOLUNTEERS

    NARCIS (Netherlands)

    Wilkinson, M.H.F.; Meijer, B.C

    1991-01-01

    The morphology of faecal microflora of nine healthy human volunteers was studied by digital image analysis of microscopic slides. Weekly specimens were collected during an 8-week period. Seven morphometrical parameters were derived: the means and medians of components 1, 2 and 3, and morphometrical

  12. Parasites and Morphometric Indices of Frozen Fish Sold in Nsukka ...

    African Journals Online (AJOL)

    The parasites and morphometric indices of frozen fish sold in Nsukka Urban Market in Nsukka Local Government Area of Enugu State, Nigeria were investigated between June and December 2008 to determine the parasite prevalence, mean intensity and abundance and some morphometric indices associated with ...

  13. Geometric approximation algorithms

    CERN Document Server

    Har-Peled, Sariel

    2011-01-01

    Exact algorithms for dealing with geometric objects are complicated, hard to implement in practice, and slow. Over the last 20 years a theory of geometric approximation algorithms has emerged. These algorithms tend to be simple, fast, and more robust than their exact counterparts. This book is the first to cover geometric approximation algorithms in detail. In addition, more traditional computational geometry techniques that are widely used in developing such algorithms, like sampling, linear programming, etc., are also surveyed. Other topics covered include approximate nearest-neighbor search, shape approximation, coresets, dimension reduction, and embeddings. The topics covered are relatively independent and are supplemented by exercises. Close to 200 color figures are included in the text to illustrate proofs and ideas.

  14. Geometrical optical illusionists.

    Science.gov (United States)

    Wade, Nicholas J

    2014-01-01

    Geometrical optical illusions were given this title by Oppel in 1855. Variants on such small distortions of visual space were illustrated thereafter, many of which bear the names of those who first described them. Some original forms of the geometrical optical illusions are shown together with 'perceptual portraits' of those who described them. These include: Roget, Chevreul, Fick, Zöllner, Poggendorff, Hering, Kundt, Delboeuf Mach, Helmholtz, Hermann, von Bezold, Müller-Lyer, Lipps, Thiéry, Wundt, Münsterberg, Ebbinghaus, Titchener, Ponzo, Luckiesh, Sander, Ehrenstein, Gregory, Heard, White, Shepard, and. Lingelbach. The illusions are grouped under the headings of orientation, size, the combination of size and orientation, and contrast. Early theories of illusions, before geometrical optical illusions were so named, are mentioned briefly.

  15. Morphometrics and Theriology. Homage to Marco Corti

    Directory of Open Access Journals (Sweden)

    Anna Loy

    2008-02-01

    Full Text Available Abstract This paper discusses the role of museum theriological collections in the context of twenty years of morphometric progresses. It also recalls twenty years of collaboration and friendship with Marco Corti, Italian theriologist and morphometrician, died on January 2007. The synthesis is addressed to the many young students that are picking up the baton and will likely contribute to the growth of the Italian school of morphometrics, to which Marco Corti dedicated most of his work at the University of Rome "La Sapienza". Riassunto Morfometria e teriologia. Omaggio a Marco Corti. Il lavoro discute il ruolo delle collezioni teriologiche alla luce di venti anni di progressi della morfometria. Esso rappresenta anche la sintesi di un’esperienza umana e professionale, avendo l’autore condiviso molte tappe della ‘rivoluzione morfometrica’ degli anni ottanta con molti dei suoi protagonisti, alcuni dei quali oggi non sono più con noi. In particolare Marco Corti, teriologo e morfometrista, scomparso nel 2007. La sintesi è anche dedicata ai molti giovani studenti e ricercatori che stanno contribuendo alla crescita della scuola italiana di morfometria, cui Marco Corti ha dedicato gli ultimi venti anni di insegnamento e ricerca all’Università di Roma "La Sapienza".

  16. Geometric and Dosimetric Approach to Determine Probability of Late Cardiac Mortality in Left Tangential Breast Irradiation: Comparison Between Wedged Beams and Field-in-Field Technique

    International Nuclear Information System (INIS)

    Pili, Giorgio; Grimaldi, Luca; Fidanza, Christian; Florio, Elena T.; Petruzzelli, Maria F.; D'Errico, Maria P.; De Tommaso, Cristina; Tramacere, Francesco; Musaio, Francesca; Castagna, Roberta; Francavilla, Maria C.; Gianicolo, Emilio A.L.; Portaluri, Maurizio

    2011-01-01

    Purpose: To evaluate the probability of late cardiac mortality resulting from left breast irradiation planned with tangential fields and to compare this probability between the wedged beam and field-in-field (FIF) techniques and to investigate whether some geometric/dosimetric indicators can be determined to estimate the cardiac mortality probability before treatment begins. Methods and Materials: For 30 patients, differential dose-volume histograms were calculated for the wedged beam and FIF plans, and the corresponding cardiac mortality probabilities were determined using the relative seriality model. As a comparative index of the dose distribution uniformity, the planning target volume (PTV) percentages involved in 97-103% of prescribed dose were determined for the two techniques. Three geometric parameters were measured for each patient: the maximal length, indicates how much the heart contours were displaced toward the PTV, the angle subtended at the center of the computed tomography slice by the PTV contour, and the thorax width/thickness ratio. Results: Evaluating the differential dose-volume histograms showed that the gain in uniformity between the two techniques was about 1.5. With the FIF technique, the mean dose sparing for the heart, the left anterior descending coronary artery, and the lung was 15% (2.5 Gy vs. 2.2 Gy), 21% (11.3 Gy vs. 9.0 Gy), and 42% (8.0 Gy vs. 4.6 Gy) respectively, compared with the wedged beam technique. Also, the cardiac mortality probability decreased by 40% (from 0.9% to 0.5%). Three geometric parameters, the maximal length, angle subtended at the center of the computed tomography slice by the PTV contour, and thorax width/thickness ratio, were the determining factors (p = .06 for FIF, and p = .10 for wedged beam) for evaluating the cardiac mortality probability. Conclusion: The FIF technique seemed to yield a lower cardiac mortality probability than the conventional wedged beam technique. However, although our study

  17. Diffraction of a Gaussian beam in a three-dimensional smoothly inhomogeneous medium: an eikonal-based complex geometrical-optics approach.

    Science.gov (United States)

    Berczynski, Pawel; Bliokh, Konstantin Yu; Kravtsov, Yuri A; Stateczny, Andrzej

    2006-06-01

    We present an ab initio account of the paraxial complex geometrical optics (CGO) in application to scalar Gaussian beam propagation and diffraction in a 3D smoothly inhomogeneous medium. The paraxial CGO deals with quadratic expansion of the complex eikonal and reduces the wave problem to the solution of ordinary differential equations of the Riccati type. This substantially simplifies the description of Gaussian beam diffraction as compared with full-wave or parabolic (quasi-optics) equations. For a Gaussian beam propagating in a homogeneous medium or along the symmetry axis in a lenslike medium, the CGO equations possess analytical solutions; otherwise, they can be readily solved numerically. As a nontrivial example we consider Gaussian beam propagation and diffraction along a helical ray in an axially symmetric waveguide medium. It is shown that the major axis of the beam's elliptical cross section grows unboundedly; it is oriented predominantly in the azimuthal (binormal) direction and does not obey the parallel-transport law.

  18. Geometric Liouville gravity

    International Nuclear Information System (INIS)

    La, H.

    1992-01-01

    A new geometric formulation of Liouville gravity based on the area preserving diffeo-morphism is given and a possible alternative to reinterpret Liouville gravity is suggested, namely, a scalar field coupled to two-dimensional gravity with a curvature constraint

  19. A Geometric Dissection Problem

    Indian Academy of Sciences (India)

    Home; Journals; Resonance – Journal of Science Education; Volume 7; Issue 7. A Geometric Dissection Problem. M N Deshpande. Think It Over Volume 7 Issue 7 July 2002 pp 91-91. Fulltext. Click here to view fulltext PDF. Permanent link: https://www.ias.ac.in/article/fulltext/reso/007/07/0091-0091. Author Affiliations.

  20. Geometric statistical inference

    International Nuclear Information System (INIS)

    Periwal, Vipul

    1999-01-01

    A reparametrization-covariant formulation of the inverse problem of probability is explicitly solved for finite sample sizes. The inferred distribution is explicitly continuous for finite sample size. A geometric solution of the statistical inference problem in higher dimensions is outlined

  1. Geometric Series via Probability

    Science.gov (United States)

    Tesman, Barry

    2012-01-01

    Infinite series is a challenging topic in the undergraduate mathematics curriculum for many students. In fact, there is a vast literature in mathematics education research on convergence issues. One of the most important types of infinite series is the geometric series. Their beauty lies in the fact that they can be evaluated explicitly and that…

  2. Pragmatic geometric model evaluation

    Science.gov (United States)

    Pamer, Robert

    2015-04-01

    Quantification of subsurface model reliability is mathematically and technically demanding as there are many different sources of uncertainty and some of the factors can be assessed merely in a subjective way. For many practical applications in industry or risk assessment (e. g. geothermal drilling) a quantitative estimation of possible geometric variations in depth unit is preferred over relative numbers because of cost calculations for different scenarios. The talk gives an overview of several factors that affect the geometry of structural subsurface models that are based upon typical geological survey organization (GSO) data like geological maps, borehole data and conceptually driven construction of subsurface elements (e. g. fault network). Within the context of the trans-European project "GeoMol" uncertainty analysis has to be very pragmatic also because of different data rights, data policies and modelling software between the project partners. In a case study a two-step evaluation methodology for geometric subsurface model uncertainty is being developed. In a first step several models of the same volume of interest have been calculated by omitting successively more and more input data types (seismic constraints, fault network, outcrop data). The positions of the various horizon surfaces are then compared. The procedure is equivalent to comparing data of various levels of detail and therefore structural complexity. This gives a measure of the structural significance of each data set in space and as a consequence areas of geometric complexity are identified. These areas are usually very data sensitive hence geometric variability in between individual data points in these areas is higher than in areas of low structural complexity. Instead of calculating a multitude of different models by varying some input data or parameters as it is done by Monte-Carlo-simulations, the aim of the second step of the evaluation procedure (which is part of the ongoing work) is to

  3. Geometrical superresolved imaging using nonperiodic spatial masking.

    Science.gov (United States)

    Borkowski, Amikam; Zalevsky, Zeev; Javidi, Bahram

    2009-03-01

    The resolution of every imaging system is limited either by the F-number of its optics or by the geometry of its detection array. The geometrical limitation is caused by lack of spatial sampling points as well as by the shape of every sampling pixel that generates spectral low-pass filtering. We present a novel approach to overcome the low-pass filtering that is due to the shape of the sampling pixels. The approach combines special algorithms together with spatial masking placed in the intermediate image plane and eventually allows geometrical superresolved imaging without relation to the actual shape of the pixels.

  4. Life history dependent morphometric variation in stream-dwelling Atlantic salmon

    Science.gov (United States)

    Letcher, B.H.

    2003-01-01

    The time course of morphometric variation among life histories for stream-dwelling Atlantic salmon (Salmo salar L.) parr (age-0+ to age-2+) was analyzed. Possible life histories were combinations of parr maturity status in the autumn (mature or immature) and age at outmigration (smolt at age-2+ or later age). Actual life histories expressed with enough fish for analysis in the 1997 cohort were immature/age-2+ smolt, mature/age-2 +smolt, and mature/age-2+ non-smolt. Tagged fish were assigned to one of the three life histories and digital pictures from the field were analyzed using landmark-based geometric morphometrics. Results indicated that successful grouping of fish according to life history varied with fish age, but that fish could be grouped before the actual expression of the life histories. By March (age-1+), fish were successfully grouped using a descriptive discriminant function and successful assignment ranged from 84 to 97% for the remainder of stream residence. A jackknife of the discriminant function revealed an average life history prediction success of 67% from age-1+ summer to smolting. Low sample numbers for one of the life histories may have limited prediction success. A MANOVA on the shape descriptors (relative warps) also indicated significant differences in shape among life histories from age-1+ summer through to smolting. Across all samples, shape varied significantly with size. Within samples, shape did not vary significantly with size for samples from December (age-0+) to May (age-1+). During the age-1+ summer however, shape varied significantly with size, but the relationship between shape and size was not different among life histories. In the autumn (age-1+) and winter (age-2+), life history differences explained a significant portion of the change in shape with size. Life history dependent morphometric variation may be useful to indicate the timing of early expressions of life history variation and as a tool to explore temporal and

  5. Estimating population age structure using otolith morphometrics

    DEFF Research Database (Denmark)

    Doering-Arjes, P.; Cardinale, M.; Mosegaard, Henrik

    2008-01-01

    known-age fish individuals. Here we used known-age Atlantic cod (Gadus morhua) from the Faroe Bank and Faroe Plateau stocks. Cod populations usually show quite large variation in growth rates and otolith shape. We showed that including otolith morphometrics into ageing processes has the potential...... populations. The intercalibration method was successful but generalization from one stock to another remains problematic. The development of an otolith growth model is needed for generalization if an operational method for different populations is required in the future....... to make ageing objective, accurate, and fast. Calibration analysis indicated that a known-age sample from the same population and environment is needed to obtain robust calibration; using a sample from a different stock more than doubles the error rate, even in the case of genetically highly related...

  6. Dynamics in geometrical confinement

    CERN Document Server

    Kremer, Friedrich

    2014-01-01

    This book describes the dynamics of low molecular weight and polymeric molecules when they are constrained under conditions of geometrical confinement. It covers geometrical confinement in different dimensionalities: (i) in nanometer thin layers or self supporting films (1-dimensional confinement) (ii) in pores or tubes with nanometric diameters (2-dimensional confinement) (iii) as micelles embedded in matrices (3-dimensional) or as nanodroplets.The dynamics under such conditions have been a much discussed and central topic in the focus of intense worldwide research activities within the last two decades. The present book discusses how the resulting molecular mobility is influenced by the subtle counterbalance between surface effects (typically slowing down molecular dynamics through attractive guest/host interactions) and confinement effects (typically increasing the mobility). It also explains how these influences can be modified and tuned, e.g. through appropriate surface coatings, film thicknesses or pore...

  7. Geometric group theory

    CERN Document Server

    Bestvina, Mladen; Vogtmann, Karen

    2014-01-01

    Geometric group theory refers to the study of discrete groups using tools from topology, geometry, dynamics and analysis. The field is evolving very rapidly and the present volume provides an introduction to and overview of various topics which have played critical roles in this evolution. The book contains lecture notes from courses given at the Park City Math Institute on Geometric Group Theory. The institute consists of a set of intensive short courses offered by leaders in the field, designed to introduce students to exciting, current research in mathematics. These lectures do not duplicate standard courses available elsewhere. The courses begin at an introductory level suitable for graduate students and lead up to currently active topics of research. The articles in this volume include introductions to CAT(0) cube complexes and groups, to modern small cancellation theory, to isometry groups of general CAT(0) spaces, and a discussion of nilpotent genus in the context of mapping class groups and CAT(0) gro...

  8. Lectures in geometric combinatorics

    CERN Document Server

    Thomas, Rekha R

    2006-01-01

    This book presents a course in the geometry of convex polytopes in arbitrary dimension, suitable for an advanced undergraduate or beginning graduate student. The book starts with the basics of polytope theory. Schlegel and Gale diagrams are introduced as geometric tools to visualize polytopes in high dimension and to unearth bizarre phenomena in polytopes. The heart of the book is a treatment of the secondary polytope of a point configuration and its connections to the state polytope of the toric ideal defined by the configuration. These polytopes are relatively recent constructs with numerous connections to discrete geometry, classical algebraic geometry, symplectic geometry, and combinatorics. The connections rely on Gr�bner bases of toric ideals and other methods from commutative algebra. The book is self-contained and does not require any background beyond basic linear algebra. With numerous figures and exercises, it can be used as a textbook for courses on geometric, combinatorial, and computational as...

  9. Geometric information provider platform

    Directory of Open Access Journals (Sweden)

    Meisam Yousefzadeh

    2015-07-01

    Full Text Available Renovation of existing buildings is known as an essential stage in reduction of the energy loss. Considerable part of renovation process depends on geometric reconstruction of building based on semantic parameters. Following many research projects which were focused on parameterizing the energy usage, various energy modelling methods were developed during the last decade. On the other hand, by developing accurate measuring tools such as laser scanners, the interests of having accurate 3D building models are rapidly growing. But the automation of 3D building generation from laser point cloud or detection of specific objects in that is still a challenge.  The goal is designing a platform through which required geometric information can be efficiently produced to support energy simulation software. Developing a reliable procedure which extracts required information from measured data and delivers them to a standard energy modelling system is the main purpose of the project.

  10. Gravity, a geometrical course

    CERN Document Server

    Frè, Pietro Giuseppe

    2013-01-01

    ‘Gravity, a Geometrical Course’ presents general relativity (GR) in a systematic and exhaustive way, covering three aspects that are homogenized into a single texture: i) the mathematical, geometrical foundations, exposed in a self consistent contemporary formalism, ii) the main physical, astrophysical and cosmological applications,  updated to the issues of contemporary research and observations, with glimpses on supergravity and superstring theory, iii) the historical development of scientific ideas underlying both the birth of general relativity and its subsequent evolution. The book is divided in two volumes.   Volume One is dedicated to the development of the theory and basic physical applications. It guides the reader from the foundation of special relativity to Einstein field equations, illustrating some basic applications in astrophysics. A detailed  account  of the historical and conceptual development of the theory is combined with the presentation of its mathematical foundations.  Differe...

  11. [Automated morphometric evaluation of the chromatin structure of liver cell nuclei after vagotomy].

    Science.gov (United States)

    Butusova, N N; Zhukotskiĭ, A V; Sherbo, I V; Gribkov, E N; Dubovaia, T K

    1989-05-01

    The morphometric analysis of the interphase chromatine structure of the hepatic cells nuclei was carried out on the automated TV installation for the quantitative analysis of images "IBAS-2" (by the OPTON firm, the FRG) according to 50 optical and geometric parameters during various periods (1.2 and 4 weeks) after the vagotomy operation. It is determined that upper-molecular organisation of chromatine undergoes the biggest changes one week after operation, and changes of granular component are more informative than changes of the nongranular component (with the difference 15-20%). It was also revealed that chromatine components differ in tinctorial properties, which are evidently dependent on physicochemical characteristics of the chromatine under various functional conditions of the cell. As a result of the correlation analysis the group of morphometric indices of chromatine structure was revealed, which are highly correlated with level of transcription activity of chromatine during various terms after denervation. The correlation quotient of these parameters is 0.85-0.97. The summing up: vagus denervation of the liver causes changes in the morphofunctional organisation of the chromatine.

  12. Geometric homology revisited

    OpenAIRE

    Ruffino, Fabio Ferrari

    2013-01-01

    Given a cohomology theory, there is a well-known abstract way to define the dual homology theory using the theory of spectra. In [4] the author provides a more geometric construction of the homology theory, using a generalization of the bordism groups. Such a generalization involves in its definition the vector bundle modification, which is a particular case of the Gysin map. In this paper we provide a more natural variant of that construction, which replaces the vector bundle modification wi...

  13. Geometric measure theory

    CERN Document Server

    Waerden, B

    1996-01-01

    From the reviews: "... Federer's timely and beautiful book indeed fills the need for a comprehensive treatise on geometric measure theory, and his detailed exposition leads from the foundations of the theory to the most recent discoveries. ... The author writes with a distinctive style which is both natural and powerfully economical in treating a complicated subject. This book is a major treatise in mathematics and is essential in the working library of the modern analyst." Bulletin of the London Mathematical Society.

  14. Developing geometrical reasoning

    OpenAIRE

    Brown, Margaret; Jones, Keith; Taylor, Ron; Hirst, Ann

    2004-01-01

    This paper summarises a report (Brown, Jones & Taylor, 2003) to the UK Qualifications and Curriculum Authority of the work of one geometry group. The group was charged with developing and reporting on teaching ideas that focus on the development of geometrical reasoning at the secondary school level. The group was encouraged to explore what is possible both within and beyond the current requirements of the UK National Curriculum and the Key Stage 3 strategy, and to consider the whole atta...

  15. Geometric theory of information

    CERN Document Server

    2014-01-01

    This book brings together geometric tools and their applications for Information analysis. It collects current and many uses of in the interdisciplinary fields of Information Geometry Manifolds in Advanced Signal, Image & Video Processing, Complex Data Modeling and Analysis, Information Ranking and Retrieval, Coding, Cognitive Systems, Optimal Control, Statistics on Manifolds, Machine Learning, Speech/sound recognition, and natural language treatment which are also substantially relevant for the industry.

  16. Studies in geometric quantization

    International Nuclear Information System (INIS)

    Tuynman, G.M.

    1988-01-01

    This thesis contains five chapters, of which the first, entitled 'What is prequantization, and what is geometric quantization?', is meant as an introduction to geometric quantization for the non-specialist. The second chapter, entitled 'Central extensions and physics' deals with the notion of central extensions of manifolds and elaborates and proves the statements made in the first chapter. Central extensions of manifolds occur in physics as the freedom of a phase factor in the quantum mechanical state vector, as the phase factor in the prequantization process of classical mechanics and it appears in mathematics when studying central extension of Lie groups. In this chapter the connection between these central extensions is investigated and a remarkable similarity between classical and quantum mechanics is shown. In chapter three a classical model is given for the hydrogen atom including spin-orbit and spin-spin interaction. The method of geometric quantization is applied to this model and the results are discussed. In the final chapters (4 and 5) an explicit method to calculate the operators corresponding to classical observables is given when the phase space is a Kaehler manifold. The obtained formula are then used to quantise symplectic manifolds which are irreducible hermitian symmetric spaces and the results are compared with other quantization procedures applied to these manifolds (in particular to Berezin's quantization). 91 refs.; 3 tabs

  17. Geometrical model of multiple production

    International Nuclear Information System (INIS)

    Chikovani, Z.E.; Jenkovszky, L.L.; Kvaratshelia, T.M.; Struminskij, B.V.

    1988-01-01

    The relation between geometrical and KNO-scaling and their violation is studied in a geometrical model of multiple production of hadrons. Predictions concerning the behaviour of correlation coefficients at future accelerators are given

  18. Geometric Computing for Freeform Architecture

    KAUST Repository

    Wallner, J.; Pottmann, Helmut

    2011-01-01

    Geometric computing has recently found a new field of applications, namely the various geometric problems which lie at the heart of rationalization and construction-aware design processes of freeform architecture. We report on our work in this area

  19. VIRTOPSY--scientific documentation, reconstruction and animation in forensic: individual and real 3D data based geo-metric approach including optical body/object surface and radiological CT/MRI scanning.

    Science.gov (United States)

    Thali, Michael J; Braun, Marcel; Buck, Ursula; Aghayev, Emin; Jackowski, Christian; Vock, Peter; Sonnenschein, Martin; Dirnhofer, Richard

    2005-03-01

    Until today, most of the documentation of forensic relevant medical findings is limited to traditional 2D photography, 2D conventional radiographs, sketches and verbal description. There are still some limitations of the classic documentation in forensic science especially if a 3D documentation is necessary. The goal of this paper is to demonstrate new 3D real data based geo-metric technology approaches. This paper present approaches to a 3D geo-metric documentation of injuries on the body surface and internal injuries in the living and deceased cases. Using modern imaging methods such as photogrammetry, optical surface and radiological CT/MRI scanning in combination it could be demonstrated that a real, full 3D data based individual documentation of the body surface and internal structures is possible in a non-invasive and non-destructive manner. Using the data merging/fusing and animation possibilities, it is possible to answer reconstructive questions of the dynamic development of patterned injuries (morphologic imprints) and to evaluate the possibility, that they are matchable or linkable to suspected injury-causing instruments. For the first time, to our knowledge, the method of optical and radiological 3D scanning was used to document the forensic relevant injuries of human body in combination with vehicle damages. By this complementary documentation approach, individual forensic real data based analysis and animation were possible linking body injuries to vehicle deformations or damages. These data allow conclusions to be drawn for automobile accident research, optimization of vehicle safety (pedestrian and passenger) and for further development of crash dummies. Real 3D data based documentation opens a new horizon for scientific reconstruction and animation by bringing added value and a real quality improvement in forensic science.

  20. A morphometric system to distinguish sheep and goat postcranial bones.

    Directory of Open Access Journals (Sweden)

    Lenny Salvagno

    Full Text Available Distinguishing between the bones of sheep and goat is a notorious challenge in zooarchaeology. Several methodological contributions have been published at different times and by various people to facilitate this task, largely relying on a macro-morphological approach. This is now routinely adopted by zooarchaeologists but, although it certainly has its value, has also been shown to have limitations. Morphological discriminant criteria can vary in different populations and correct identification is highly dependent upon a researcher's experience, availability of appropriate reference collections, and many other factors that are difficult to quantify. There is therefore a need to establish a more objective system, susceptible to scrutiny. In order to fulfil such a requirement, this paper offers a comprehensive morphometric method for the identification of sheep and goat postcranial bones, using a sample of more than 150 modern skeletons as a basis, and building on previous pioneering work. The proposed method is based on measurements-some newly created, others previously published-and its use is recommended in combination with the more traditional morphological approach. Measurement ratios, used to translate morphological traits into biometrical attributes, are demonstrated to have substantial diagnostic potential, with the vast majority of specimens correctly assigned to species. The efficacy of the new method is also tested with Discriminant Analysis, which provides a successful verification of the biometrical indices, a statistical means to select the most promising measurements, and an additional line of analysis to be used in conjunction with the others.

  1. A morphometric system to distinguish sheep and goat postcranial bones.

    Science.gov (United States)

    Salvagno, Lenny; Albarella, Umberto

    2017-01-01

    Distinguishing between the bones of sheep and goat is a notorious challenge in zooarchaeology. Several methodological contributions have been published at different times and by various people to facilitate this task, largely relying on a macro-morphological approach. This is now routinely adopted by zooarchaeologists but, although it certainly has its value, has also been shown to have limitations. Morphological discriminant criteria can vary in different populations and correct identification is highly dependent upon a researcher's experience, availability of appropriate reference collections, and many other factors that are difficult to quantify. There is therefore a need to establish a more objective system, susceptible to scrutiny. In order to fulfil such a requirement, this paper offers a comprehensive morphometric method for the identification of sheep and goat postcranial bones, using a sample of more than 150 modern skeletons as a basis, and building on previous pioneering work. The proposed method is based on measurements-some newly created, others previously published-and its use is recommended in combination with the more traditional morphological approach. Measurement ratios, used to translate morphological traits into biometrical attributes, are demonstrated to have substantial diagnostic potential, with the vast majority of specimens correctly assigned to species. The efficacy of the new method is also tested with Discriminant Analysis, which provides a successful verification of the biometrical indices, a statistical means to select the most promising measurements, and an additional line of analysis to be used in conjunction with the others.

  2. MORPHOMETRIC EVIDENCE FOR NUTRITIONAL STRESS IN ENGLISH SOLE

    Science.gov (United States)

    We present an application of the powerful thin plate spline method of morphometric analysis to demonstrate its utility for detecting environmental stress in an estuarine flatfish. Juvenile English sole (Pleuronectes vetulus) were captured from Yaquina Bay, Oregon, photographed w...

  3. Morphometric characteristics in the horseshoe crab Tachypleus gigas (Arthropoda: Merostomata)

    Digital Repository Service at National Institute of Oceanography (India)

    Vijayakumar, R.; Das, S.; Chatterji, A.; Parulekar, A.H.

    comparative morphometry. This study also emphasizes that care must be taken to apply morphometric for a uniform size group of horseshoe crab populations. It is known that the changes in the form of an animal cannot be described satisfactorily...

  4. Morphometric Changes in the Cortical Microvascular Network in Alzheimer's Disease

    NARCIS (Netherlands)

    Richard, E.; van Gool, W.A.; Hoozemans, J.J.M.; van Haastert, E.S.; Eikelenboom, P.; Rozemuller, A.J.M.; van de Berg, W.D.J.

    2010-01-01

    Alzheimer's disease (AD) pathology is accompanied by abnormalities of the microvasculature. Despite the potential importance of morphometric changes in the cortical capillary network on neuronal dysfunction and cognitive impairment, few autopsy studies have addressed this issue. In the present

  5. Morphometric analysis of Dactylorhiza hatagirea (D. Don), a critically ...

    African Journals Online (AJOL)

    Admin

    2012-07-12

    Jul 12, 2012 ... interplay of climate, geographical history and evolutionary dynamics in ... morphometric analysis of living plant (Dressler and. Dodson, 1960) and to the .... Number of flowers. 25. UPPINT ..... Classification and phylogeny in the.

  6. Morphometric analysis of Dactylorhiza hatagirea (D. Don), a critically ...

    African Journals Online (AJOL)

    The morphometric study was conducted during 2009 to 2010. About 28 morphological characters were measured under 13 natural populations of Dactylorhiza hatagirea. Geographic variation in morphology reflects phenotypic responses to environmental gradients and evolutionary history of populations and species.

  7. Image understanding using geometric context

    Science.gov (United States)

    Zhang, Xiaochun; Liu, Chuancai

    2017-07-01

    A Gibbs Sampler based topic model for image annotation, which takes into account the interaction between visual geometric context and related topic, is presented. Most of the existing topic models for scene annotation use segmentation-based algorithm. However, topic models using segmentation algorithm alone sometimes can produce erroneous results when used to annotate real-life scene pictures. Therefore, our algorithm makes use of peaks of image surface instead of segmentation regions. Existing approaches use SIFT algorithm and treat the peaks as round blob features. In this paper, the peaks are treated as anisotropic blob features, which models low level visual elements more precisely. In order to better utilize visual features, our model not only takes into consideration visual codeword, but also considers influence of visual properties to topic formation, such as orientation, width, length and color. The basic idea is based on the assumption that different topics will produce distinct visual appearance, and different visual appearance is helpful to distinguish topics. During the learning stage, each topic will be associated with a set of distributions of visual properties, which depicts appearance of the topic. This paper considers more geometric properties, which will reduce topic uncertainty and learn the images better. Tested with Corel5K, SAIAPR-TC12 and Espgame100k Datasets, our method performs moderately better than some state of the arts methods.

  8. Geometric Constructions with the Computer.

    Science.gov (United States)

    Chuan, Jen-chung

    The computer can be used as a tool to represent and communicate geometric knowledge. With the appropriate software, a geometric diagram can be manipulated through a series of animation that offers more than one particular snapshot as shown in a traditional mathematical text. Geometric constructions with the computer enable the learner to see and…

  9. The Spacetime Memory of Geometric Phases and Quantum Computing

    CERN Document Server

    Binder, B

    2002-01-01

    Spacetime memory is defined with a holonomic approach to information processing, where multi-state stability is introduced by a non-linear phase-locked loop. Geometric phases serve as the carrier of physical information and geometric memory (of orientation) given by a path integral measure of curvature that is periodically refreshed. Regarding the resulting spin-orbit coupling and gauge field, the geometric nature of spacetime memory suggests to assign intrinsic computational properties to the electromagnetic field.

  10. A MORPHOMETRIC STUDY OF THE SELLA TURCICA; GENDER EFFECT

    OpenAIRE

    Ashraf Mohamed Elsayed Ali SAKRAN *1, Mohammad Afzal KHAN 2, Faris Mohammed Nour ALTAF 3, Hassan Elsiddig Hassan FARAGALLA 4, Amal Yousif Ahmed Elhaj MUSTAFA 5, Muhammad Mazhar HIJAZI 6, Rayan Abdulshakur NIYAZI 7, Abrar Jamal TAWAKUL 8, Abeer Zubair MALEBARI 9, Amal AbdulAziz SALEM 10.

    2015-01-01

    Background and objective: Precise anatomical knowledge of the sella turcica is important for neurologists and surgeons operating in the region of cavernous sinus or the surrounding structures. The current study was undertaken to record normal morphometric parameters for future reference and to determine if there is any significance difference in the sella turcica morphometry regarding the gender. Methodology: A Morphometric analysis of the Sella Turcica and structures in vicinity were done...

  11. Rejuvenating Allen's Arc with the Geometric Mean.

    Science.gov (United States)

    Phillips, William A.

    1994-01-01

    Contends that, despite ongoing criticism, Allen's arc elasticity formula remains entrenched in the microeconomics principles curriculum. Reviews the evolution and continuing scrutiny of the formula. Argues that the use of the geometric mean offers pedagogical advantages over the traditional arithmetic mean approach. (CFR)

  12. Geometric Models for Collaborative Search and Filtering

    Science.gov (United States)

    Bitton, Ephrat

    2011-01-01

    This dissertation explores the use of geometric and graphical models for a variety of information search and filtering applications. These models serve to provide an intuitive understanding of the problem domains and as well as computational efficiencies to our solution approaches. We begin by considering a search and rescue scenario where both…

  13. On Kaehler's geometric description of dirac fields

    International Nuclear Information System (INIS)

    Goeckeler, M.; Joos, H.

    1983-12-01

    A differential geometric generalization of the Dirac equation due to E. Kaehler seems to be an appropriate starting point for the lattice approximation of matter fields. It is the purpose of this lecture to illustrate several aspects of this approach. (orig./HSI)

  14. Robust Geometric Control of a Distillation Column

    DEFF Research Database (Denmark)

    Kymmel, Mogens; Andersen, Henrik Weisberg

    1987-01-01

    A frequency domain method, which makes it possible to adjust multivariable controllers with respect to both nominal performance and robustness, is presented. The basic idea in the approach is that the designer assigns objectives such as steady-state tracking, maximum resonance peaks, bandwidth, m...... is used to examine and improve geometric control of a binary distillation column....

  15. Population studies of Glossina pallidipes in Ethiopia: emphasis on cuticular hydrocarbons and wing morphometric analysis.

    Science.gov (United States)

    Getahun, M N; Cecchi, G; Seyoum, E

    2014-10-01

    Tsetse flies, like many insects, use pheromones for inter- and intra-specific communication. Several of their pheromones are cuticular hydrocarbons (CHCs) that are perceived by contact at close range. We hypothesized that for a successful implementation of the Sterile Insect Technique (SIT), along with proper identification of target area and target species, the target tsetse populations and the sterile flies must chemically communicate with each other. To study the population structuring of Glossina pallidipes in Ethiopia, CHCs were extracted and analyzed from three tsetse belts. As a comparative approach, wing morphometric analysis was performed. The analysis of the relative abundance of CHCs revealed that populations of G. pallidipes from the Rift Valley tsetse belt showed a distinct clustering compared to populations from the other two belts. The spatial pattern of CHC differences was complemented by the wing morphometric analysis. Our data suggest that CHCs of known biological and ecological role, when combined with wing morphometric data, will provide an alternative means for the study of population structuring of Glossina populations. This could aid the planning of area wide control strategies using SIT, which is dependent on sexual competence. Copyright © 2014 International Atomic Energy Agency 2014. Published by Elsevier B.V. All rights reserved.

  16. Pelvic Floor Morphometric Differences in Elderly Women with or without Urinary Incontinence.

    Science.gov (United States)

    Fradet, Sarah; Morin, Mélanie; Kruger, Jennifer; Dumoulin, Chantale

    2018-01-01

    Purpose: Urinary incontinence (UI) affects as many as 50% of women aged 60 years and older, but UI pathophysiology, specifically in elderly women, remains unclear. A better understanding of morphometric differences between continent and urinary incontinent elderly women is needed to improve the effectiveness of conservative treatment approaches. We hypothesized that morphometric differences in the pelvic floor muscles (PFM) among elderly women with and without UI could be observed using three- and four-dimensional (3D/4D) transperineal ultrasound (TPU) imaging. Method: A total of 40 elderly women (20 women with and 20 women without UI), with a mean age of 67.10 (SD 4.94) years, participated in the study. This was a case-control study in which TPU images were taken under three conditions: rest, maximal voluntary contraction (MVC), and Valsalva. Independent t -tests were conducted to compare measurements between the groups. Results: The study revealed statistically significant differences between the groups. At rest, the levator hiatal area and transverse diameter were bigger, and the PFM position was lower in the incontinent group. During MVC, all axial plane parameters were bigger in the incontinent group. In the sagittal plane, PFM position was again lower in the incontinent group. During Valsalva, the anorectal angle was wider in the women with incontinence. Conclusion: PFM morphometric differences were present and were observed using 3D/4D TPU imaging in elderly women with and without UI.

  17. Capability of applying morphometric parameters of relief in river basins for geomorphological zoning of a territory

    Science.gov (United States)

    Ivanov, M. A.; Yermolaev, O. P.

    2018-01-01

    Information about morphometric characteristics of relief is necessary for researches devoted to geographic characteristics of territory, its zoning, assessment of erosion processes, geoecological condition and others. For the Volga Federal District for the first time a spatial database of geomorphometric parameters 1: 200 000 scale was created, based on a river basin approach. Watersheds are used as a spatial units created by semi-automated method using the terrain and hydrological modeling techniques implemented in the TAS GIS and WhiteBox GIS. As input data DEMs SRTM and Aster GDEM and hydrographic network vectorized from topographic maps were used. Using DEM highlighted above for each river basin, basic morphometric relief characteristics such as mean height, slope steepness, slope length, height range, river network density and factor LS were calculated. Basins belonging to the geomorphological regions and landscape zones was determined, according to the map of geomorphological zoning and landscape map. Analysis of variance revealed a statistically significant relationship between these characteristics and geomorphological regions and landscape zones. Consequently, spatial trends of changes of analyzed morphometric characteristics were revealed.

  18. Digital Morphometrics: A New Upper Airway Phenotyping Paradigm in OSA.

    Science.gov (United States)

    Schwab, Richard J; Leinwand, Sarah E; Bearn, Cary B; Maislin, Greg; Rao, Ramya Bhat; Nagaraja, Adithya; Wang, Stephen; Keenan, Brendan T

    2017-08-01

    OSA is associated with changes in pharyngeal anatomy. The goal of this study was to objectively and reproducibly quantify pharyngeal anatomy by using digital morphometrics based on a laser ruler and to assess differences between subjects with OSA and control subjects and associations with the apnea-hypopnea index (AHI). To the best of our knowledge, this study is the first to use digital morphometrics to quantify intraoral risk factors for OSA. Digital photographs were obtained by using an intraoral laser ruler and digital camera in 318 control subjects (mean AHI, 4.2 events/hour) and 542 subjects with OSA (mean AHI, 39.2 events/hour). The digital morphometric paradigm was validated and reproducible over time and camera distances. A larger modified Mallampati score and having a nonvisible airway were associated with a higher AHI, both unadjusted (P digital morphometrics is an accurate, high-throughput, and noninvasive technique to identify anatomic OSA risk factors. Morphometrics may also provide a more reproducible and standardized measurement of the Mallampati score. Digital morphometrics represent an efficient and cost-effective method of examining intraoral crowding and tongue size when examining large populations, genetics, or screening for OSA. Copyright © 2017 American College of Chest Physicians. Published by Elsevier Inc. All rights reserved.

  19. Geometric Algebra Computing

    CERN Document Server

    Corrochano, Eduardo Bayro

    2010-01-01

    This book presents contributions from a global selection of experts in the field. This useful text offers new insights and solutions for the development of theorems, algorithms and advanced methods for real-time applications across a range of disciplines. Written in an accessible style, the discussion of all applications is enhanced by the inclusion of numerous examples, figures and experimental analysis. Features: provides a thorough discussion of several tasks for image processing, pattern recognition, computer vision, robotics and computer graphics using the geometric algebra framework; int

  20. Geometric multipartite entanglement measures

    International Nuclear Information System (INIS)

    Paz-Silva, Gerardo A.; Reina, John H.

    2007-01-01

    Within the framework of constructions for quantifying entanglement, we build a natural scenario for the assembly of multipartite entanglement measures based on Hopf bundle-like mappings obtained through Clifford algebra representations. Then, given the non-factorizability of an arbitrary two-qubit density matrix, we give an alternate quantity that allows the construction of two types of entanglement measures based on their arithmetical and geometrical averages over all pairs of qubits in a register of size N, and thus fully characterize its degree and type of entanglement. We find that such an arithmetical average is both additive and strongly super additive

  1. Geometric correlations and multifractals

    International Nuclear Information System (INIS)

    Amritkar, R.E.

    1991-07-01

    There are many situations where the usual statistical methods are not adequate to characterize correlations in the system. To characterize such situations we introduce mutual correlation dimensions which describe geometric correlations in the system. These dimensions allow us to distinguish between variables which are perfectly correlated with or without a phase lag, variables which are uncorrelated and variables which are partially correlated. We demonstrate the utility of our formalism by considering two examples from dynamical systems. The first example is about the loss of memory in chaotic signals and describes auto-correlations while the second example is about synchronization of chaotic signals and describes cross-correlations. (author). 19 refs, 6 figs

  2. Longitudinal morphometric MRI study of Alzheimer's disease

    International Nuclear Information System (INIS)

    Ogomori, Koji; Takano, Koichi; Kuwabara, Yasuo; Nakano, Seigo; Nawata, Hideyuki; Yano, Rika; Nishimura, Ryoji; Takita, Masashi

    2009-01-01

    A longitudinal morphometric MRI study of Alzheimer's disease (AD) was conducted to determine the relationship between the progression of the symptoms and the progression of the brain atrophy. The Voxel-based Specific Regional Analysis System for Alzheimer's Disease (VSRAD), developed by Matsuda et al. was used as a method of morphometry to perform the statistical MR image analysis. Thirty-eight patients of AD patients were investigated with VSRAD. These patients were divided into two groups according to the progression of symptoms based on a clinical evaluation. One group was the progress group (20 patients), while the other group was the stable group (18 patients) for comparison. The relationship was investigated between the speed of the symptomatic progression and the change in each VSRAD indicator. Consequently, the entorhinal Z-score and the entorhinal atrophy rate showed a correlation with the speed of the symptomatic progression. The increase of the entorhinal Z-score in the follow-up was larger in the progress group than that in the stable group (0.65/1.28 years in the progress group and 0.05/1.26 years in the stable group.). These results suggest that a rapid symptomatic progression in an AD patient accompanies the rapid progression of atrophy in the entorhinal cortex. (author)

  3. Understanding geometric algebra for electromagnetic theory

    CERN Document Server

    Arthur, John W

    2011-01-01

    "This book aims to disseminate geometric algebra as a straightforward mathematical tool set for working with and understanding classical electromagnetic theory. It's target readership is anyone who has some knowledge of electromagnetic theory, predominantly ordinary scientists and engineers who use it in the course of their work, or postgraduate students and senior undergraduates who are seeking to broaden their knowledge and increase their understanding of the subject. It is assumed that the reader is not a mathematical specialist and is neither familiar with geometric algebra or its application to electromagnetic theory. The modern approach, geometric algebra, is the mathematical tool set we should all have started out with and once the reader has a grasp of the subject, he or she cannot fail to realize that traditional vector analysis is really awkward and even misleading by comparison"--Provided by publisher.

  4. Spherical projections and liftings in geometric tomography

    DEFF Research Database (Denmark)

    Goodey, Paul; Kiderlen, Markus; Weil, Wolfgang

    2011-01-01

    We consider a variety of integral transforms arising in Geometric Tomography. It will be shown that these can be put into a common framework using spherical projection and lifting operators. These operators will be applied to support functions and surface area measures of convex bodies and to rad......We consider a variety of integral transforms arising in Geometric Tomography. It will be shown that these can be put into a common framework using spherical projection and lifting operators. These operators will be applied to support functions and surface area measures of convex bodies...... and to radial functions of star bodies. We then investigate averages of lifted projections and show that they correspond to self-adjoint intertwining operators. We obtain formulas for the eigenvalues of these operators and use them to ascertain circumstances under which tomographic measurements determine...... the original bodies. This approach via mean lifted projections leads us to some unexpected relationships between seemingly disparate geometric constructions....

  5. From the geometric quantization to conformal field theory

    International Nuclear Information System (INIS)

    Alekseev, A.; Shatashvili, S.

    1990-01-01

    Investigation of 2d conformal field theory in terms of geometric quantization is given. We quantize the so-called model space of the compact Lie group, Virasoro group and Kac-Moody group. In particular, we give a geometrical interpretation of the Virasoro discrete series and explain that this type of geometric quantization reproduces the chiral part of CFT (minimal models, 2d-gravity, WZNW theory). In the appendix we discuss the relation between classical (constant) r-matrices and this geometrical approach. (orig.)

  6. Host-based identification is not supported by morphometrics in natural populations of Gyrodactylus salaris and G. thymalli (Platyhelminthes, Monogenea).

    Science.gov (United States)

    Olstad, K; Shinn, A P; Bachmann, L; Bakke, T A

    2007-12-01

    Gyrodactylus salaris is a serious pest of wild pre-smolt Atlantic salmon (Salmo salar) in Norway. The closely related G. thymalli, originally described from grayling (Thymallus thymallus), is assumed harmless to both grayling and salmon. The 2 species are difficult to distinguish using traditional, morphometric methods or molecular approaches. The aim of this study was to explore whether there is a consistent pattern of morphometrical variation between G. salaris and G. thymalli and to analyse the morphometric variation in the context of 'diagnostic realism' (in natural populations). Specimens from the type-material for the 2 species are also included. In total, 27 point-to-point measurements from the opisthaptoral hard parts were used and analysed by digital image processing and uni- and multivariate morphometry. All populations most closely resembled its respective type material, as expected from host species, with the exception of G. thymalli from the Norwegian river Trysilelva. We, therefore, did not find clear support in the morphometrical variation among G. salaris and G. thymalli for an a priori species delineation based on host. The present study also indicates an urgent need for more detailed knowledge on the influence of environmental factors on the phenotype of gyrodactylid populations.

  7. Fast geometric algorithms

    International Nuclear Information System (INIS)

    Noga, M.T.

    1984-01-01

    This thesis addresses a number of important problems that fall within the framework of the new discipline of Computational Geometry. The list of topics covered includes sorting and selection, convex hull algorithms, the L 1 hull, determination of the minimum encasing rectangle of a set of points, the Euclidean and L 1 diameter of a set of points, the metric traveling salesman problem, and finding the superrange of star-shaped and monotype polygons. The main theme of all the work was to develop a set of very fast state-of-the-art algorithms that supersede any rivals in terms of speed and ease of implementation. In some cases existing algorithms were refined; for others new techniques were developed that add to the present database of fast adaptive geometric algorithms. What emerges is a collection of techniques that is successful at merging modern tools developed in analysis of algorithms with those of classical geometry

  8. Geometrical Image Transforms

    OpenAIRE

    Havelka, Jan

    2008-01-01

    Tato diplomová práce se zabývá akcelerací geometrických transformací obrazu s využitím GPU a architektury NVIDIA (R) CUDA TM. Časově kritické části kódu jsou přesunuty na GPU a vykonány paralelně. Jedním z výsledků je demonstrační aplikace pro porovnání výkonnosti obou architektur: CPU, a GPU v kombinaci s CPU. Pro referenční implementaci jsou použity vysoce optimalizované algoritmy z knihovny OpenCV, od firmy Intel. This master's thesis deals with acceleration of geometrical image transfo...

  9. MORPHOMETRIC ANALYSES OF THE PARACENTRAL LOBE

    Directory of Open Access Journals (Sweden)

    Moacyr Oliveira Neto

    2014-03-01

    Full Text Available ntroduction:There are no studies that evaluate measurements of the distances between the grooves that delimit the Paracentral Lobule (PCL in the literature. This study seeks to contribute to the knowledge regarding the anatomy of the PCL, conducting an analysis of morphometric measurements in this region and its correlation with the paracentral sulcus, marginal branch of the cingulate and central sulcus. Methods:42 hemispheres were evaluated, 20 were right and 22 left. Using digital caliper Dc - 6 Western ®, measurements of the size of PCL in the sagittal axis and coronal axis were made, in addition to measures of the Central Sulcus to the Paracentral Sulcus (motor area and Central Sulcus to Marginal Branch of the Cingulate Sulcus (somesthetic area, comparing the prevalence of each of these lengths between hemispheres. Results:The average length between the Paracentral Sulcus and the Central Sulcus was 24.49 cm(14.2 to 38.6 cm in the right hemisphere and 25.50 cm(11.7 to 37.0 cm in the left. As between the Central Sulcus and the Marginal Branch of the Cingulate Sulcus was in average 10.03 cm(2.6 to 22.7 cm in the right and in the left PCL 9.17cm(2.6 to 22.7 cm. In the right hemisphere, 19 samples(86,4% presented greater motor area than somesthetic and, in the left hemisphere, 19 samples(95% had greater motor area. Conclusion:The motor area showed prevalence in relation to the sensory area in the analysis of the two hemispheres, while the comparison of other measures between the two hemispheres showed no significance.

  10. Frequency Preference Response to Oscillatory Inputs in Two-dimensional Neural Models: A Geometric Approach to Subthreshold Amplitude and Phase Resonance.

    Science.gov (United States)

    Rotstein, Horacio G

    2014-01-01

    We investigate the dynamic mechanisms of generation of subthreshold and phase resonance in two-dimensional linear and linearized biophysical (conductance-based) models, and we extend our analysis to account for the effect of simple, but not necessarily weak, types of nonlinearities. Subthreshold resonance refers to the ability of neurons to exhibit a peak in their voltage amplitude response to oscillatory input currents at a preferred non-zero (resonant) frequency. Phase-resonance refers to the ability of neurons to exhibit a zero-phase (or zero-phase-shift) response to oscillatory input currents at a non-zero (phase-resonant) frequency. We adapt the classical phase-plane analysis approach to account for the dynamic effects of oscillatory inputs and develop a tool, the envelope-plane diagrams, that captures the role that conductances and time scales play in amplifying the voltage response at the resonant frequency band as compared to smaller and larger frequencies. We use envelope-plane diagrams in our analysis. We explain why the resonance phenomena do not necessarily arise from the presence of imaginary eigenvalues at rest, but rather they emerge from the interplay of the intrinsic and input time scales. We further explain why an increase in the time-scale separation causes an amplification of the voltage response in addition to shifting the resonant and phase-resonant frequencies. This is of fundamental importance for neural models since neurons typically exhibit a strong separation of time scales. We extend this approach to explain the effects of nonlinearities on both resonance and phase-resonance. We demonstrate that nonlinearities in the voltage equation cause amplifications of the voltage response and shifts in the resonant and phase-resonant frequencies that are not predicted by the corresponding linearized model. The differences between the nonlinear response and the linear prediction increase with increasing levels of the time scale separation between

  11. Establishing some Correlations between Certain Morphometric Parameters and Embryo Quality

    Directory of Open Access Journals (Sweden)

    Nicolae Păcală

    2011-05-01

    Full Text Available The aim of this paper was to establish some correlations between certain morphometric parameters and embryo quality. The morphometric parameters taken into consideration were: zona pellucida thickness, outer and inner diameter, and outer and inner perimeter. For experiments we used embryos recovered at 24 hours from mouse females superovulated with gonadotrope hormones (eCG and hCG. The embryos recovered were cultivated in KSOM media, supplemented with amino acids, and during the in vitro cultivation they were measured at different time intervals for establishing morphometric parameters. The data obtained were statistically analyzed using Minitab 15, using Fitted Line Plot regression that allows testing of the linear and polynomial regression of one variable. After statistical analyze of the data we found that the thickness of the zona pellucida can constitute a morphometric parameter that can be used as an indicator of subsequent development of the 2 cell embryos to morula and blastocyst stage respectively. The other morphometric parameters studied (outer and inner diameter, and outer and inner perimeter cannot be used as indicators of the embryo development.

  12. Morphometric analysis of llama (Lama glama) sperm head.

    Science.gov (United States)

    Casaretto, C; Lombardo, D M; Giuliano, S; Gambarotta, M; Carretero, M I; Miragaya, M H

    2012-05-01

    Llama production in Argentina has increased, as the international interest in breeding this type of animals has grown in the last years. Considering the great polymorphism that llama spermatozoa present at evaluation using light microscopy, the aim of this study was to objectively evaluate llama sperm head morphometry using digital morphometric analysis. Five ejaculates from each of eight males were obtained to evaluate morphometric parameters of 8000 sperm heads stained with Tinción 15(®). The following average results were obtained for each parameter: size parameters: area 20.09 μm(2), length 6.60 μm, width 4.14 μm, equivalent circle diameter 5.06 μm, curve length 5.79 μm and curve width 3.48 μm; boundary parameters: perimeter 18.54 μm and convex perimeter 17.34 μm; and shape parameters: roundness 1.28 and elongation 1.59. Morphometric parameters of sperm head were compared between ejaculates of the same male and between males. Significant differences between ejaculates of the same male were found for all parameters evaluated (P < 0.01). Significant differences between males were found for all morphometric parameters (P < 0.01) except for curve length, curve width and perimeter. The differences detected would indicate that there is not a single morphometric pattern for Lama glama sperm head, because parameter values cannot be standardised. © 2011 Blackwell Verlag GmbH.

  13. Assessment of the relationships between morphometric characteristics of relief with quantitative and qualitative characteristics of forests using ASTER and SRTM digital terrain models

    Directory of Open Access Journals (Sweden)

    D. M. Chernikhovsky

    2017-06-01

    Full Text Available In the article are shown results of assessment of relationships between quantitative and qualitative characteristics of forests and morphometric characteristics of relief on an example model plot in Nanayskoe forest district of Khabarovsk Territory. The relevance of the investigation is connected with need for improvement of the system of forest evaluation operations in the Russian Federation, including with use of the landscape approach. The tasks of the investigation were assessment of relationships between characteristics of relief and characteristics of forest vegetation cover on different levels of forest management; evaluation of morphometric characteristics of relief are important for structure and productivity of forests; comparison of the results obtained through the use of digital terrain models ASTER and SRTM. Geoinformatic projects were formed for a model plot on the basis of digital terrain models and data of forest mensuration and State (National Forest Inventory. On the basis of the developed method with use geoinformatic technologies were estimated morphometric characteristics of relief (average height, standard deviation of height, entropy, exposition and gradient of slopes, indexes of ruggedness and roughness, quantitative and qualitative characteristics of forests. The multifactor regression analysis, where characteristics of forests (as dependent variables and morphometric characteristics of relief (as independent variables were used, have been done. As a result of research, the set of morphometric characteristics of relief able to influence to variability of quantitative and qualitative characteristics of forests was identified. The set of linear regression equations able to explain 30–50 % of variability of dependent variables was obtained. The regression equations, obtained on base of digital terrain models ASTER and SRTM, comparable to each other in strength of relations (coefficients of determination, but includes the

  14. Loggerhead sea turtle oral cavity morphometrics and size class from 2001 to 2004 (NCEI Accession 0164321)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — This data set contains standard external morphometrics and internal oral cavity morphometrics from wild and captive reared loggerhead sea turtles in size classes...

  15. Monthly morphometric data on captive Kemps ridley sea turtles from 1998-2014 (NCEI Accession 0156880)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — This data contains monthly morphometric measurements on captive reared sea turtles at the Galveston, TX NOAA lab. Morphometric measurements are taken to track growth...

  16. Harmonic and geometric analysis

    CERN Document Server

    Citti, Giovanna; Pérez, Carlos; Sarti, Alessandro; Zhong, Xiao

    2015-01-01

    This book presents an expanded version of four series of lectures delivered by the authors at the CRM. Harmonic analysis, understood in a broad sense, has a very wide interplay with partial differential equations and in particular with the theory of quasiconformal mappings and its applications. Some areas in which real analysis has been extremely influential are PDE's and geometric analysis. Their foundations and subsequent developments made extensive use of the Calderón–Zygmund theory, especially the Lp inequalities for Calderón–Zygmund operators (Beurling transform and Riesz transform, among others) and the theory of Muckenhoupt weights.  The first chapter is an application of harmonic analysis and the Heisenberg group to understanding human vision, while the second and third chapters cover some of the main topics on linear and multilinear harmonic analysis. The last serves as a comprehensive introduction to a deep result from De Giorgi, Moser and Nash on the regularity of elliptic partial differen...

  17. Regular Polygons and Geometric Series.

    Science.gov (United States)

    Jarrett, Joscelyn A.

    1982-01-01

    Examples of some geometric illustrations of limits are presented. It is believed the limit concept is among the most important topics in mathematics, yet many students do not have good intuitive feelings for the concept, since it is often taught very abstractly. Geometric examples are suggested as meaningful tools. (MP)

  18. Geometric Invariants and Object Recognition.

    Science.gov (United States)

    1992-08-01

    University of Chicago Press. Maybank , S.J. [1992], "The Projection of Two Non-coplanar Conics", in Geometric Invariance in Machine Vision, eds. J.L...J.L. Mundy and A. Zisserman, MIT Press, Cambridge, MA. Mundy, J.L., Kapur, .. , Maybank , S.J., and Quan, L. [1992a] "Geometric Inter- pretation of

  19. Noncritical String Liouville Theory and Geometric Bootstrap Hypothesis

    Science.gov (United States)

    Hadasz, Leszek; Jaskólski, Zbigniew

    The applications of the existing Liouville theories for the description of the longitudinal dynamics of noncritical Nambu-Goto string are analyzed. We show that the recently developed DOZZ solution to the Liouville theory leads to the cut singularities in tree string amplitudes. We propose a new version of the Polyakov geometric approach to Liouville theory and formulate its basic consistency condition — the geometric bootstrap equation. Also in this approach the tree amplitudes develop cut singularities.

  20. Morphometric relations of fractal-skeletal based channel network model

    Directory of Open Access Journals (Sweden)

    B. S. Daya Sagar

    1998-01-01

    Full Text Available A fractal-skeletal based channel network (F-SCN model is proposed. Four regular sided initiator-basins are transformed as second order fractal basins by following a specific generating mechanism with non-random rule. The morphological skeletons, hereafter referred to as channel networks, are extracted from these fractal basins. The morphometric and fractal relationships of these F-SCNs are shown. The fractal dimensions of these fractal basins, channel networks, and main channel lengths (computed through box counting method are compared with those of estimated length–area measures. Certain morphometric order ratios to show fractal relations are also highlighted.

  1. Transmuted Complementary Weibull Geometric Distribution

    Directory of Open Access Journals (Sweden)

    Ahmed Z. A…fify

    2014-12-01

    Full Text Available This paper provides a new generalization of the complementary Weibull geometric distribution that introduced by Tojeiro et al. (2014, using the quadratic rank transmutation map studied by Shaw and Buckley (2007. The new distribution is referred to as transmuted complementary Weibull geometric distribution (TCWGD. The TCWG distribution includes as special cases the complementary Weibull geometric distribution (CWGD, complementary exponential geometric distribution(CEGD,Weibull distribution (WD and exponential distribution (ED. Various structural properties of the new distribution including moments, quantiles, moment generating function and RØnyi entropy of the subject distribution are derived. We proposed the method of maximum likelihood for estimating the model parameters and obtain the observed information matrix. A real data set are used to compare the ‡exibility of the transmuted version versus the complementary Weibull geometric distribution.

  2. A web-system of virtual morphometric globes

    Science.gov (United States)

    Florinsky, Igor; Garov, Andrei; Karachevtseva, Irina

    2017-04-01

    Virtual globes — programs implementing interactive three-dimensional (3D) models of planets — are increasingly used in geo- and planetary sciences. We develop a web-system of virtual morphometric globes. As the initial data, we used the following global digital elevation models (DEMs): (1) a DEM of the Earth extracted from SRTM30_PLUS database; (2) a DEM of Mars extracted from the Mars Orbiter Laser Altimeter (MOLA) gridded data record archive; and (3) A DEM of the Moon extracted from the Lunar Orbiter Laser Altimeter (LOLA) gridded data record archive. From these DEMs, we derived global digital models of the following 16 local, nonlocal, and combined morphometric variables: horizontal curvature, vertical curvature, mean curvature, Gaussian curvature, minimal curvature, maximal curvature, unsphericity curvature, difference curvature, vertical excess curvature, horizontal excess curvature, ring curvature, accumulation curvature, catchment area, dispersive area, topographic index, and stream power index (definitions, formulae, and interpretations can be found elsewhere [1]). To calculate local morphometric variables, we applied a finite-difference method intended for spheroidal equal angular grids [1]. Digital models of a nonlocal and combined morphometric variables were derived by a method of Martz and de Jong adapted to spheroidal equal angular grids [1]. DEM processing was performed in the software LandLord [1]. The calculated morphometric models were integrated into the testing version of the system. The following main functions are implemented in the system: (1) selection of a celestial body; (2) selection of a morphometric variable; (3) 2D visualization of a calculated global morphometric model (a map in equirectangular projection); (4) 3D visualization of a calculated global morphometric model on the sphere surface (a globe by itself); (5) change of a globe scale (zooming); and (6) globe rotation by an arbitrary angle. The testing version of the system

  3. Geometric approach to nuclear pasta phases

    Science.gov (United States)

    Kubis, Sebastian; Wójcik, Włodzimierz

    2016-12-01

    By use of the variational methods and differential geometry in the framework of the liquid drop model we formulate appropriate equilibrium equations for pasta phases with imposed periodicity. The extension of the Young-Laplace equation in the case of charged fluid is obtained. The β equilibrium and virial theorem are also generalized. All equations are shown in gauge invariant form. For the first time, the pasta shape stability analysis is carried out. The proper stability condition in the form of the generalized Jacobi equation is derived. The presented formalism is tested on some particular cases.

  4. Geometric control theory and sub-Riemannian geometry

    CERN Document Server

    Boscain, Ugo; Gauthier, Jean-Paul; Sarychev, Andrey; Sigalotti, Mario

    2014-01-01

    This volume presents recent advances in the interaction between Geometric Control Theory and sub-Riemannian geometry. On the one hand, Geometric Control Theory used the differential geometric and Lie algebraic language for studying controllability, motion planning, stabilizability and optimality for control systems. The geometric approach turned out to be fruitful in applications to robotics, vision modeling, mathematical physics etc. On the other hand, Riemannian geometry and its generalizations, such as  sub-Riemannian, Finslerian  geometry etc., have been actively adopting methods developed in the scope of geometric control. Application of these methods  has led to important results regarding geometry of sub-Riemannian spaces, regularity of sub-Riemannian distances, properties of the group  of diffeomorphisms of sub-Riemannian manifolds, local geometry and equivalence of distributions and sub-Riemannian structures, regularity of the Hausdorff volume.

  5. Geometrical method of decoupling

    Directory of Open Access Journals (Sweden)

    C. Baumgarten

    2012-12-01

    Full Text Available The computation of tunes and matched beam distributions are essential steps in the analysis of circular accelerators. If certain symmetries—like midplane symmetry—are present, then it is possible to treat the betatron motion in the horizontal, the vertical plane, and (under certain circumstances the longitudinal motion separately using the well-known Courant-Snyder theory, or to apply transformations that have been described previously as, for instance, the method of Teng and Edwards. In a preceding paper, it has been shown that this method requires a modification for the treatment of isochronous cyclotrons with non-negligible space charge forces. Unfortunately, the modification was numerically not as stable as desired and it was still unclear, if the extension would work for all conceivable cases. Hence, a systematic derivation of a more general treatment seemed advisable. In a second paper, the author suggested the use of real Dirac matrices as basic tools for coupled linear optics and gave a straightforward recipe to decouple positive definite Hamiltonians with imaginary eigenvalues. In this article this method is generalized and simplified in order to formulate a straightforward method to decouple Hamiltonian matrices with eigenvalues on the real and the imaginary axis. The decoupling of symplectic matrices which are exponentials of such Hamiltonian matrices can be deduced from this in a few steps. It is shown that this algebraic decoupling is closely related to a geometric “decoupling” by the orthogonalization of the vectors E[over →], B[over →], and P[over →], which were introduced with the so-called “electromechanical equivalence.” A mathematical analysis of the problem can be traced down to the task of finding a structure-preserving block diagonalization of symplectic or Hamiltonian matrices. Structure preservation means in this context that the (sequence of transformations must be symplectic and hence canonical. When

  6. Morphometric Studies Of The Cerebellum And Forebrain Of The ...

    African Journals Online (AJOL)

    Morphometric studies were undertaken using the brains of six African giant rats. The mean of weights and lengths (tip of the olfactory bulb to the caudal border of the cerebellum) were observed tobe 4.88 0.183g and 4.40 0.193g, respectively. Similarly, the mean weight and length of the cerebellum and the forebrain ...

  7. 13 Morphometric Analysis of Ogunpa and Ogbere Drainage Basins ...

    African Journals Online (AJOL)

    `123456789jkl''''#

    significance of these landscape parameters was ... reported that the geomorphic characteristics of a drainage basins play ... form and process of drainage basins that may ... tropical rain forest of Nigeria occupying an area of .... morphometric parameters such as relief, shape ... on floodplains can be pulled down while areas.

  8. Morphometric Evaluation of Preeclamptic Placenta Using Light Microscopic Images

    Directory of Open Access Journals (Sweden)

    Rashmi Mukherjee

    2014-01-01

    Full Text Available Deficient trophoblast invasion and anomalies in placental development generally lead to preeclampsia (PE but the inter-relationship between placental function and morphology in PE still remains unknown. The aim of this study was to evaluate the morphometric features of placental villi and capillaries in preeclamptic and normal placentae. The study included light microscopic images of placental tissue sections of 40 preeclamptic and 35 normotensive pregnant women. Preprocessing and segmentation of these images were performed to characterize the villi and capillaries. Fisher’s linear discriminant analysis (FLDA, hierarchical cluster analysis (HCA, and principal component analysis (PCA were applied to identify the most significant placental (morphometric features from microscopic images. A total of 10 morphometric features were extracted, of which the villous parameters were significantly altered in PE. FLDA identified 5 highly significant morphometric features (>90% overall discrimination accuracy. Two large subclusters were clearly visible in HCA based dendrogram. PCA returned three most significant principal components cumulatively explaining 98.4% of the total variance based on these 5 significant features. Hence, quantitative microscopic evaluation revealed that placental morphometry plays an important role in characterizing PE, where the villous is the major component that is affected.

  9. Morphometric and landuse analysis: implications on flood hazards ...

    African Journals Online (AJOL)

    This study assessed the morphometric, landuse and lithological attributes of five basins (Iwaraja, Ilesa, Olupona, Osogbo I and Osogbo II) with particular reference to flood hazards in Ilesa and Osogbo metropolis, Osun State Nigeria. Ilesa town is situated within Iwaraja and Ilesa basins while Osogbo metropolis spread ...

  10. morphometric features of a low-elevation urban catchment

    African Journals Online (AJOL)

    PROF EKWUEME

    River basin morphometric is a geomorphological tool that applies to physical ... Harcourt region's drainage as it pertains to flooding described the area as ... floods in several sub-basins of a river that posed risks to ... Bight of Bonny, off the Gulf of Guinea into the Atlantic ..... the extreme; because such forest will be thick and.

  11. Morphometric Analysis of Mandibular Growth in Skeletal Class III Malocclusion

    Directory of Open Access Journals (Sweden)

    Jenny Zwei-Chieng Chang

    2006-01-01

    Conclusion: We conclude that thin-plate spline analysis and the finite element morphometric method are efficient for the localization and quantification of size and shape changes that occur during mandibular growth. Plots of maximum and minimum principal directions can provide useful information about the trends of growth changes.

  12. Effect of Genotype and Age on Some Morphometric, Body Linear ...

    African Journals Online (AJOL)

    A population of 231 roosters of the Nigerian indigenous chickens of normal feathered frizzle feathered and naked neck genotypes was evaluated for the effect of genotype and age on some morphometric body linear measurements and semen characteristics of three Nigerian chicken genotypes. 20 roosters from each ...

  13. Morphometric analyses of the river basins in Goa

    Digital Repository Service at National Institute of Oceanography (India)

    Iyer, S.D.; Wagle, B.G.

    Morphometric analyses of seven river basins in Goa, India have been carried out. The linear and areal aspects of these basins are reported here. The plots of stream order versus stream numbers and stream orders versus mean stream lengths are found...

  14. Morphometric variation in the Tunisian green frog, Rana saharica ...

    African Journals Online (AJOL)

    Rana saharica is the most widely distributed anuran in Tunisia. We examined morphological variation in 124 specimens as a function of their geographical origin, using univariate and multivariate statistics with traditional morphometrics. Our results supported the existence of three morphotypes of this species, correctly ...

  15. A morphometric analysis of the genus Ficus Linn. (moraceae ...

    African Journals Online (AJOL)

    Foliar parameters of Ficus in Nigeria were subjected to quantitative analysis. The morphometric analysis is based on ten quantitative parameters of the leaves of species. Principal compound analysis produced six groups whose characters are described. Highly significant positive correlation exists between leaf length and ...

  16. Discriminant analysis of morphometric differentiation in the West ...

    African Journals Online (AJOL)

    This study evaluated the usefulness of morphological characteristics to distinguish two important indigenous goat breeds in Nigeria. Fifteen morphometric traits were measured on West African Dwarf – WAD (n = 160) and Red Sokoto – RS (n = 142) goats that ranged in age of up to 19 months and were reared extensively in ...

  17. Gross and morphometric anatomical changes of the thyroid gland in ...

    African Journals Online (AJOL)

    Gross and morphometric anatomical changes of the thyroid gland in the West African Dwarf Goat ( Capra hircus ) during the foetal and post-natal periods of development. ... The right lobe was more cranially located on the larynx and trachea than the left lobe in all age groups. Thyroid isthmus was absent in few foetal thyroid ...

  18. Morphometric studies on a part of Central Indian Ocean

    Digital Repository Service at National Institute of Oceanography (India)

    Kodagali, V.N.

    Morphometric and slope angle studies carried out on a part of Indian Ocean Basin have shown that gentle slope angle ranges dominate, 92% of the area represented by 0-3 degrees slopes. Young's hypothesis of log-normal distribution of slope angle...

  19. External morphometric study of hatchery reared mahseer ( Tor ...

    African Journals Online (AJOL)

    Different samples of Mahseer (Tor putitora) were examined for the study of external morphometric characters of the fish. Slopes of log transformed data were used for comparison with an isometric slopes (b=1, b= 0.33 or b= 3). Relationships between wet body weight and external body parts lengths showed that increasing ...

  20. Hybridization within a Pilosella population: a morphometric analysis

    Czech Academy of Sciences Publication Activity Database

    Urfus, Tomáš; Krahulec, František; Krahulcová, Anna

    2014-01-01

    Roč. 49, č. 2 (2014), s. 223-238 ISSN 1211-9520 R&D Projects: GA ČR GA206/08/0890 Institutional research plan: CEZ:AV0Z60050516 Institutional support: RVO:67985939 Keywords : hybridization * introgression * multivariate morphometrics Subject RIV: EF - Botanics Impact factor: 1.778, year: 2014

  1. Geometric inequalities for black holes

    International Nuclear Information System (INIS)

    Dain, Sergio

    2013-01-01

    Full text: A geometric inequality in General Relativity relates quantities that have both a physical interpretation and a geometrical definition. It is well known that the parameters that characterize the Kerr-Newman black hole satisfy several important geometric inequalities. Remarkably enough, some of these inequalities also hold for dynamical black holes. This kind of inequalities, which are valid in the dynamical and strong field regime, play an important role in the characterization of the gravitational collapse. They are closed related with the cosmic censorship conjecture. In this talk I will review recent results in this subject. (author)

  2. Geometric Computing for Freeform Architecture

    KAUST Repository

    Wallner, J.

    2011-06-03

    Geometric computing has recently found a new field of applications, namely the various geometric problems which lie at the heart of rationalization and construction-aware design processes of freeform architecture. We report on our work in this area, dealing with meshes with planar faces and meshes which allow multilayer constructions (which is related to discrete surfaces and their curvatures), triangles meshes with circle-packing properties (which is related to conformal uniformization), and with the paneling problem. We emphasize the combination of numerical optimization and geometric knowledge.

  3. Optical traps with geometric aberrations

    International Nuclear Information System (INIS)

    Roichman, Yael; Waldron, Alex; Gardel, Emily; Grier, David G.

    2006-01-01

    We assess the influence of geometric aberrations on the in-plane performance of optical traps by studying the dynamics of trapped colloidal spheres in deliberately distorted holographic optical tweezers. The lateral stiffness of the traps turns out to be insensitive to moderate amounts of coma, astigmatism, and spherical aberration. Moreover holographic aberration correction enables us to compensate inherent shortcomings in the optical train, thereby adaptively improving its performance. We also demonstrate the effects of geometric aberrations on the intensity profiles of optical vortices, whose readily measured deformations suggest a method for rapidly estimating and correcting geometric aberrations in holographic trapping systems

  4. Geometric inequalities for black holes

    Energy Technology Data Exchange (ETDEWEB)

    Dain, Sergio [Universidad Nacional de Cordoba (Argentina)

    2013-07-01

    Full text: A geometric inequality in General Relativity relates quantities that have both a physical interpretation and a geometrical definition. It is well known that the parameters that characterize the Kerr-Newman black hole satisfy several important geometric inequalities. Remarkably enough, some of these inequalities also hold for dynamical black holes. This kind of inequalities, which are valid in the dynamical and strong field regime, play an important role in the characterization of the gravitational collapse. They are closed related with the cosmic censorship conjecture. In this talk I will review recent results in this subject. (author)

  5. Automated Morphological and Morphometric Analysis of Mass Spectrometry Imaging Data: Application to Biomarker Discovery

    Science.gov (United States)

    Picard de Muller, Gaël; Ait-Belkacem, Rima; Bonnel, David; Longuespée, Rémi; Stauber, Jonathan

    2017-12-01

    Mass spectrometry imaging datasets are mostly analyzed in terms of average intensity in regions of interest. However, biological tissues have different morphologies with several sizes, shapes, and structures. The important biological information, contained in this highly heterogeneous cellular organization, could be hidden by analyzing the average intensities. Finding an analytical process of morphology would help to find such information, describe tissue model, and support identification of biomarkers. This study describes an informatics approach for the extraction and identification of mass spectrometry image features and its application to sample analysis and modeling. For the proof of concept, two different tissue types (healthy kidney and CT-26 xenograft tumor tissues) were imaged and analyzed. A mouse kidney model and tumor model were generated using morphometric - number of objects and total surface - information. The morphometric information was used to identify m/z that have a heterogeneous distribution. It seems to be a worthwhile pursuit as clonal heterogeneity in a tumor is of clinical relevance. This study provides a new approach to find biomarker or support tissue classification with more information. [Figure not available: see fulltext.

  6. Morphometric variation in Plio-Pleistocene hominid distal humeri.

    Science.gov (United States)

    Lague, M R; Jungers, W L

    1996-11-01

    The magnitude and meaning of morphological variation among Plio-Pleistocene hominid distal humeri have been recurrent points of disagreement among paleoanthropologists. Some researchers have found noteworthy differences among fossil humeri that they believe merit taxonomic separation, while others question the possibility of accurately sorting these fossils into different species and/or functional groups. Size and shape differences among fossil distal humeri are evaluated here to determine whether the magnitude and patterns of these differences can be observed within large-bodied, living hominoids. Specimens analyzed in this study have been assigned to various taxa (Australopithecus afarensis, A. africanus, A. anamensis, Paranthropus, and early Homo) and include AL 288-1m, AL 288-1s, AL 137-48a, AL 322-1, Gomboré IB 7594, TM 1517, KNM-ER 739, KNM-ER 1504, KMN-KP 271 (Kanapoi), and Stw 431. Five extant hominoid populations are sampled to provide a standard by which to consider differences found between the fossils, including two modern human groups (Native American and African American), one group of Pan troglodytes, and two subspecies of Gorilla gorilla (G.g. beringei, G.g. gorilla). All possible pairwise d values (average Euclidena distances) are calculated within each of the reference populations using an exact randomization procedure. This is done using both raw linear measurements as well as scale-free shape data created as ratios of each measurement to the geometric mean. Differences between each pair of fossil humeri are evaluated by comparing their d values to the distribution of d values found within each of the reference populations. Principal coordinate analysis and an unweighted pair group method with arithmetic averages (UPGMA) cluster analysis are utilized to further assess similarities and differences among the fossils. Finally, canonical variates analysis and discriminant analysis are employed using all hominoid samples in order to control for

  7. Construction of Individual Morphological Brain Networks with Multiple Morphometric Features

    Directory of Open Access Journals (Sweden)

    Chunlan Yang

    2017-04-01

    Full Text Available In recent years, researchers have increased attentions to the morphological brain network, which is generally constructed by measuring the mathematical correlation across regions using a certain morphometric feature, such as regional cortical thickness and voxel intensity. However, cerebral structure can be characterized by various factors, such as regional volume, surface area, and curvature. Moreover, most of the morphological brain networks are population-based, which has limitations in the investigations of individual difference and clinical applications. Hence, we have extended previous studies by proposing a novel method for realizing the construction of an individual-based morphological brain network through a combination of multiple morphometric features. In particular, interregional connections are estimated using our newly introduced feature vectors, namely, the Pearson correlation coefficient of the concatenation of seven morphometric features. Experiments were performed on a healthy cohort of 55 subjects (24 males aged from 20 to 29 and 31 females aged from 20 to 28 each scanned twice, and reproducibility was evaluated through test–retest reliability. The robustness of morphometric features was measured firstly to select the more reproducible features to form the connectomes. Then the topological properties were analyzed and compared with previous reports of different modalities. Small-worldness was observed in all the subjects at the range of the entire network sparsity (20–40%, and configurations were comparable with previous findings at the sparsity of 23%. The spatial distributions of the hub were found to be significantly influenced by the individual variances, and the hubs obtained by averaging across subjects and sparsities showed correspondence with previous reports. The intraclass coefficient of graphic properties (clustering coefficient = 0.83, characteristic path length = 0.81, betweenness centrality = 0.78 indicates

  8. Femtosecond pulse shaping using the geometric phase.

    Science.gov (United States)

    Gökce, Bilal; Li, Yanming; Escuti, Michael J; Gundogdu, Kenan

    2014-03-15

    We demonstrate a femtosecond pulse shaper that utilizes polarization gratings to manipulate the geometric phase of an optical pulse. This unique approach enables circular polarization-dependent shaping of femtosecond pulses. As a result, it is possible to create coherent pulse pairs with orthogonal polarizations in a 4f pulse shaper setup, something until now that, to our knowledge, was only achieved via much more complex configurations. This approach could be used to greatly simplify and enhance the functionality of multidimensional spectroscopy and coherent control experiments, in which multiple coherent pulses are used to manipulate quantum states in materials of interest.

  9. Discrete geometric structures for architecture

    KAUST Repository

    Pottmann, Helmut

    2010-01-01

    . The talk will provide an overview of recent progress in this field, with a particular focus on discrete geometric structures. Most of these result from practical requirements on segmenting a freeform shape into planar panels and on the physical realization

  10. Geometric Rationalization for Freeform Architecture

    KAUST Repository

    Jiang, Caigui

    2016-01-01

    The emergence of freeform architecture provides interesting geometric challenges with regards to the design and manufacturing of large-scale structures. To design these architectural structures, we have to consider two types of constraints. First

  11. Geometrical optics in general relativity

    OpenAIRE

    Loinger, A.

    2006-01-01

    General relativity includes geometrical optics. This basic fact has relevant consequences that concern the physical meaning of the discontinuity surfaces propagated in the gravitational field - as it was first emphasized by Levi-Civita.

  12. Geometrical Description of fractional quantum Hall quasiparticles

    Science.gov (United States)

    Park, Yeje; Yang, Bo; Haldane, F. D. M.

    2012-02-01

    We examine a description of fractional quantum Hall quasiparticles and quasiholes suggested by a recent geometrical approach (F. D. M. Haldane, Phys. Rev. Lett. 108, 116801 (2011)) to FQH systems, where the local excess electric charge density in the incompressible state is given by a topologically-quantized ``guiding-center spin'' times the Gaussian curvature of a ``guiding-center metric tensor'' that characterizes the local shape of the correlation hole around electrons in the fluid. We use a phenomenological energy function with two ingredients: the shear distortion energy of area-preserving distortions of the fluid, and a local (short-range) approximation to the Coulomb energy of the fluctuation of charge density associated with the Gaussian curvature. Quasiparticles and quasiholes of the 1/3 Laughlin state are modeled as ``punctures'' in the incompressible fluid which then relax by geometric distortion which generates Gaussian curvature, giving rise to the charge-density profile around the topological excitation.

  13. The geometric Hopf invariant and surgery theory

    CERN Document Server

    Crabb, Michael

    2017-01-01

    Written by leading experts in the field, this monograph provides homotopy theoretic foundations for surgery theory on higher-dimensional manifolds. Presenting classical ideas in a modern framework, the authors carefully highlight how their results relate to (and generalize) existing results in the literature. The central result of the book expresses algebraic surgery theory in terms of the geometric Hopf invariant, a construction in stable homotopy theory which captures the double points of immersions. Many illustrative examples and applications of the abstract results are included in the book, making it of wide interest to topologists. Serving as a valuable reference, this work is aimed at graduate students and researchers interested in understanding how the algebraic and geometric topology fit together in the surgery theory of manifolds. It is the only book providing such a wide-ranging historical approach to the Hopf invariant, double points and surgery theory, with many results old and new. .

  14. A practical guide to experimental geometrical optics

    CERN Document Server

    Garbovskiy, Yuriy A

    2017-01-01

    A concise, yet deep introduction to experimental, geometrical optics, this book begins with fundamental concepts and then develops the practical skills and research techniques routinely used in modern laboratories. Suitable for students, researchers and optical engineers, this accessible text teaches readers how to build their own optical laboratory and to design and perform optical experiments. It uses a hands-on approach which fills a gap between theory-based textbooks and laboratory manuals, allowing the reader to develop their practical skills in this interdisciplinary field, and also explores the ways in which this knowledge can be applied to the design and production of commercial optical devices. Including supplementary online resources to help readers track and evaluate their experimental results, this text is the ideal companion for anyone with a practical interest in experimental geometrical optics.

  15. Geometrical description of fields

    International Nuclear Information System (INIS)

    Sokolik, H.

    1979-01-01

    The author suggests a purely algebraic interpretation of interaction. The main idea is to consider interaction as a deformation of an inhomogeneous algebra composed of momentum operators and an arbitrary group admitting the equation of the theory. The only difference between this approach and the conventional one is that the generalized momentum operators do not commute with aech other, due not merely to the introduction of some external interaction field, but to the change of the structure of the algebra from which the theory stems

  16. GEOMETRIZATION OF NONHOLONOMIC MECHANICAL SYSTEMS AND THEIR SOLVABILITY

    Institute of Scientific and Technical Information of China (English)

    慕小武; 郭仲衡

    1990-01-01

    A new geometrization approach to nonholonomic mechanical systems is proposed and a series of solvability conditions under the proposed geometric frame are given. The proposed frame differs essentially from Hermann’s. The limitations of Hermann’s frame are also discussed. It is shown that a system under Hermann’s frame is solvable only if its constraints are given by natural conservation laws of the corresponding constraint-free system.

  17. East Greenland and Barents Sea polar bears (Ursus maritimus): adaptive variation between two populations using skull morphometrics as an indicator of environmental and genetic differences.

    Science.gov (United States)

    Pertoldi, Cino; Sonne, Christian; Wiig, Øystein; Baagøe, Hans J; Loeschcke, Volker; Bechshøft, Thea Østergaard

    2012-06-01

    A morphometric study was conducted on four skull traits of 37 male and 18 female adult East Greenland polar bears (Ursus maritimus) collected 1892-1968, and on 54 male and 44 female adult Barents Sea polar bears collected 1950-1969. The aim was to compare differences in size and shape of the bear skulls using a multivariate approach, characterizing the variation between the two populations using morphometric traits as an indicator of environmental and genetic differences. Mixture analysis testing for geographic differentiation within each population revealed three clusters for Barents Sea males and three clusters for Barents Sea females. East Greenland consisted of one female and one male cluster. A principal component analysis (PCA) conducted on the clusters defined by the mixture analysis, showed that East Greenland and Barents Sea polar bear populations overlapped to a large degree, especially with regards to females. Multivariate analyses of variance (MANOVA) showed no significant differences in morphometric means between the two populations, but differences were detected between clusters from each respective geographic locality. To estimate the importance of genetics and environment in the morphometric differences between the bears, a PCA was performed on the covariance matrix derived from the skull measurements. Skull trait size (PC1) explained approx. 80% of the morphometric variation, whereas shape (PC2) defined approx. 15%, indicating some genetic differentiation. Hence, both environmental and genetic factors seem to have contributed to the observed skull differences between the two populations. Overall, results indicate that many Barents Sea polar bears are morphometrically similar to the East Greenland ones, suggesting an exchange of individuals between the two populations. Furthermore, a subpopulation structure in the Barents Sea population was also indicated from the present analyses, which should be considered with regards to future management

  18. Geometric Mixing, Peristalsis, and the Geometric Phase of the Stomach.

    Science.gov (United States)

    Arrieta, Jorge; Cartwright, Julyan H E; Gouillart, Emmanuelle; Piro, Nicolas; Piro, Oreste; Tuval, Idan

    2015-01-01

    Mixing fluid in a container at low Reynolds number--in an inertialess environment--is not a trivial task. Reciprocating motions merely lead to cycles of mixing and unmixing, so continuous rotation, as used in many technological applications, would appear to be necessary. However, there is another solution: movement of the walls in a cyclical fashion to introduce a geometric phase. We show using journal-bearing flow as a model that such geometric mixing is a general tool for using deformable boundaries that return to the same position to mix fluid at low Reynolds number. We then simulate a biological example: we show that mixing in the stomach functions because of the "belly phase," peristaltic movement of the walls in a cyclical fashion introduces a geometric phase that avoids unmixing.

  19. Geometric Mixing, Peristalsis, and the Geometric Phase of the Stomach.

    Directory of Open Access Journals (Sweden)

    Jorge Arrieta

    Full Text Available Mixing fluid in a container at low Reynolds number--in an inertialess environment--is not a trivial task. Reciprocating motions merely lead to cycles of mixing and unmixing, so continuous rotation, as used in many technological applications, would appear to be necessary. However, there is another solution: movement of the walls in a cyclical fashion to introduce a geometric phase. We show using journal-bearing flow as a model that such geometric mixing is a general tool for using deformable boundaries that return to the same position to mix fluid at low Reynolds number. We then simulate a biological example: we show that mixing in the stomach functions because of the "belly phase," peristaltic movement of the walls in a cyclical fashion introduces a geometric phase that avoids unmixing.

  20. JMorph: Software for performing rapid morphometric measurements on digital images of fossil assemblages

    Science.gov (United States)

    Lelièvre, Peter G.; Grey, Melissa

    2017-08-01

    Quantitative morphometric analyses of form are widely used in palaeontology, especially for taxonomic and evolutionary research. These analyses can involve several measurements performed on hundreds or even thousands of samples. Performing measurements of size and shape on large assemblages of macro- or microfossil samples is generally infeasible or impossible with traditional instruments such as vernier calipers. Instead, digital image processing software is required to perform measurements via suitable digital images of samples. Many software packages exist for morphometric analyses but there is not much available for the integral stage of data collection, particularly for the measurement of the outlines of samples. Some software exists to automatically detect the outline of a fossil sample from a digital image. However, automatic outline detection methods may perform inadequately when samples have incomplete outlines or images contain poor contrast between the sample and staging background. Hence, a manual digitization approach may be the only option. We are not aware of any software packages that are designed specifically for efficient digital measurement of fossil assemblages with numerous samples, especially for the purposes of manual outline analysis. Throughout several previous studies, we have developed a new software tool, JMorph, that is custom-built for that task. JMorph provides the means to perform many different types of measurements, which we describe in this manuscript. We focus on JMorph's ability to rapidly and accurately digitize the outlines of fossils. JMorph is freely available from the authors.

  1. Topological Data Analysis as a Morphometric Method: Using Persistent Homology to Demarcate a Leaf Morphospace

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    Mao Li

    2018-04-01

    Full Text Available Current morphometric methods that comprehensively measure shape cannot compare the disparate leaf shapes found in seed plants and are sensitive to processing artifacts. We explore the use of persistent homology, a topological method applied as a filtration across simplicial complexes (or more simply, a method to measure topological features of spaces across different spatial resolutions, to overcome these limitations. The described method isolates subsets of shape features and measures the spatial relationship of neighboring pixel densities in a shape. We apply the method to the analysis of 182,707 leaves, both published and unpublished, representing 141 plant families collected from 75 sites throughout the world. By measuring leaves from throughout the seed plants using persistent homology, a defined morphospace comparing all leaves is demarcated. Clear differences in shape between major phylogenetic groups are detected and estimates of leaf shape diversity within plant families are made. The approach predicts plant family above chance. The application of a persistent homology method, using topological features, to measure leaf shape allows for a unified morphometric framework to measure plant form, including shapes, textures, patterns, and branching architectures.

  2. Quantitative diagnosis of bladder cancer by morphometric analysis of HE images

    Science.gov (United States)

    Wu, Binlin; Nebylitsa, Samantha V.; Mukherjee, Sushmita; Jain, Manu

    2015-02-01

    In clinical practice, histopathological analysis of biopsied tissue is the main method for bladder cancer diagnosis and prognosis. The diagnosis is performed by a pathologist based on the morphological features in the image of a hematoxylin and eosin (HE) stained tissue sample. This manuscript proposes algorithms to perform morphometric analysis on the HE images, quantify the features in the images, and discriminate bladder cancers with different grades, i.e. high grade and low grade. The nuclei are separated from the background and other types of cells such as red blood cells (RBCs) and immune cells using manual outlining, color deconvolution and image segmentation. A mask of nuclei is generated for each image for quantitative morphometric analysis. The features of the nuclei in the mask image including size, shape, orientation, and their spatial distributions are measured. To quantify local clustering and alignment of nuclei, we propose a 1-nearest-neighbor (1-NN) algorithm which measures nearest neighbor distance and nearest neighbor parallelism. The global distributions of the features are measured using statistics of the proposed parameters. A linear support vector machine (SVM) algorithm is used to classify the high grade and low grade bladder cancers. The results show using a particular group of nuclei such as large ones, and combining multiple parameters can achieve better discrimination. This study shows the proposed approach can potentially help expedite pathological diagnosis by triaging potentially suspicious biopsies.

  3. Time as a geometric property of space

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    James Michael Chappell

    2016-11-01

    Full Text Available The proper description of time remains a key unsolved problem in science. Newton conceived of time as absolute and universal which it `flows equably without relation to anything external'}. In the nineteenth century, the four-dimensional algebraic structure of the quaternions developed by Hamilton, inspired him to suggest that they could provide a unified representation of space and time. With the publishing of Einstein's theory of special relativity these ideas then lead to the generally accepted Minkowski spacetime formulation in 1908. Minkowski, though, rejected the formalism of quaternions suggested by Hamilton and adopted rather an approach using four-vectors. The Minkowski framework is indeed found to provide a versatile formalism for describing the relationship between space and time in accordance with Einstein's relativistic principles, but nevertheless fails to provide more fundamental insights into the nature of time itself. In order to answer this question we begin by exploring the geometric properties of three-dimensional space that we model using Clifford geometric algebra, which is found to contain sufficient complexity to provide a natural description of spacetime. This description using Clifford algebra is found to provide a natural alternative to the Minkowski formulation as well as providing new insights into the nature of time. Our main result is that time is the scalar component of a Clifford space and can be viewed as an intrinsic geometric property of three-dimensional space without the need for the specific addition of a fourth dimension.

  4. Plasma geometric optics analysis and computation

    International Nuclear Information System (INIS)

    Smith, T.M.

    1983-01-01

    Important practical applications in the generation, manipulation, and diagnosis of laboratory thermonuclear plasmas have created a need for elaborate computational capabilities in the study of high frequency wave propagation in plasmas. A reduced description of such waves suitable for digital computation is provided by the theory of plasma geometric optics. The existing theory is beset by a variety of special cases in which the straightforward analytical approach fails, and has been formulated with little attention to problems of numerical implementation of that analysis. The standard field equations are derived for the first time from kinetic theory. A discussion of certain terms previously, and erroneously, omitted from the expansion of the plasma constitutive relation is given. A powerful but little known computational prescription for determining the geometric optics field in the neighborhood of caustic singularities is rigorously developed, and a boundary layer analysis for the asymptotic matching of the plasma geometric optics field across caustic singularities is performed for the first time with considerable generality. A proper treatment of birefringence is detailed, wherein a breakdown of the fundamental perturbation theory is identified and circumvented. A general ray tracing computer code suitable for applications to radiation heating and diagnostic problems is presented and described

  5. A new geometrical gravitational theory

    International Nuclear Information System (INIS)

    Obata, T.; Chiba, J.; Oshima, H.

    1981-01-01

    A geometrical gravitational theory is developed. The field equations are uniquely determined apart from one unknown dimensionless parameter ω 2 . It is based on an extension of the Weyl geometry, and by the extension the gravitational coupling constant and the gravitational mass are made to be dynamical and geometrical. The fundamental geometrical objects in the theory are a metric gsub(μν) and two gauge scalars phi and psi. The theory satisfies the weak equivalence principle, but breaks the strong one generally. u(phi, psi) = phi is found out on the assumption that the strong one keeps holding good at least for bosons of low spins. Thus there is the simple correspondence between the geometrical objects and the gravitational objects. Since the theory satisfies the weak one, the inertial mass is also dynamical and geometrical in the same way as is the gravitational mass. Moreover, the cosmological term in the theory is a coscalar of power -4 algebraically made of psi and u(phi, psi), so it is dynamical, too. Finally spherically symmetric exact solutions are given. The permissible range of the unknown parameter ω 2 is experimentally determined by applying the solutions to the solar system. (author)

  6. Quantifying traces of tool use: a novel morphometric analysis of damage patterns on percussive tools.

    Directory of Open Access Journals (Sweden)

    Matthew V Caruana

    Full Text Available Percussive technology continues to play an increasingly important role in understanding the evolution of tool use. Comparing the archaeological record with extractive foraging behaviors in nonhuman primates has focused on percussive implements as a key to investigating the origins of lithic technology. Despite this, archaeological approaches towards percussive tools have been obscured by a lack of standardized methodologies. Central to this issue have been the use of qualitative, non-diagnostic techniques to identify percussive tools from archaeological contexts. Here we describe a new morphometric method for distinguishing anthropogenically-generated damage patterns on percussive tools from naturally damaged river cobbles. We employ a geomatic approach through the use of three-dimensional scanning and geographical information systems software to statistically quantify the identification process in percussive technology research. This will strengthen current technological analyses of percussive tools in archaeological frameworks and open new avenues for translating behavioral inferences of early hominins from percussive damage patterns.

  7. Quantifying Traces of Tool Use: A Novel Morphometric Analysis of Damage Patterns on Percussive Tools

    Science.gov (United States)

    Caruana, Matthew V.; Carvalho, Susana; Braun, David R.; Presnyakova, Darya; Haslam, Michael; Archer, Will; Bobe, Rene; Harris, John W. K.

    2014-01-01

    Percussive technology continues to play an increasingly important role in understanding the evolution of tool use. Comparing the archaeological record with extractive foraging behaviors in nonhuman primates has focused on percussive implements as a key to investigating the origins of lithic technology. Despite this, archaeological approaches towards percussive tools have been obscured by a lack of standardized methodologies. Central to this issue have been the use of qualitative, non-diagnostic techniques to identify percussive tools from archaeological contexts. Here we describe a new morphometric method for distinguishing anthropogenically-generated damage patterns on percussive tools from naturally damaged river cobbles. We employ a geomatic approach through the use of three-dimensional scanning and geographical information systems software to statistically quantify the identification process in percussive technology research. This will strengthen current technological analyses of percussive tools in archaeological frameworks and open new avenues for translating behavioral inferences of early hominins from percussive damage patterns. PMID:25415303

  8. Craniofacial morphometric analysis of individuals with X-linked hypohidrotic ectodermal dysplasia.

    Science.gov (United States)

    Goodwin, Alice F; Larson, Jacinda R; Jones, Kyle B; Liberton, Denise K; Landan, Maya; Wang, Zhifeng; Boekelheide, Anne; Langham, Margaret; Mushegyan, Vagan; Oberoi, Snehlata; Brao, Rosalie; Wen, Timothy; Johnson, Ramsey; Huttner, Kenneth; Grange, Dorothy K; Spritz, Richard A; Hallgrímsson, Benedikt; Jheon, Andrew H; Klein, Ophir D

    2014-09-01

    Hypohidrotic ectodermal dysplasia (HED) is the most prevalent type of ectodermal dysplasia (ED). ED is an umbrella term for a group of syndromes characterized by missing or malformed ectodermal structures, including skin, hair, sweat glands, and teeth. The X-linked recessive (XL), autosomal recessive (AR), and autosomal dominant (AD) types of HED are caused by mutations in the genes encoding ectodysplasin (EDA1), EDA receptor (EDAR), or EDAR-associated death domain (EDARADD). Patients with HED have a distinctive facial appearance, yet a quantitative analysis of the HED craniofacial phenotype using advanced three-dimensional (3D) technologies has not been reported. In this study, we characterized craniofacial morphology in subjects with X-linked hypohidrotic ectodermal dysplasia (XLHED) by use of 3D imaging and geometric morphometrics (GM), a technique that uses defined landmarks to quantify size and shape in complex craniofacial morphologies. We found that the XLHED craniofacial phenotype differed significantly from controls. Patients had a smaller and shorter face with a proportionally longer chin and midface, prominent midfacial hypoplasia, a more protrusive chin and mandible, a narrower and more pointed nose, shorter philtrum, a narrower mouth, and a fuller and more rounded lower lip. Our findings refine the phenotype of XLHED and may be useful both for clinical diagnosis of XLHED and to extend understanding of the role of EDA in craniofacial development.

  9. Morphometric Analysis of the Mandible in Subjects with Class III Malocclusion

    Directory of Open Access Journals (Sweden)

    Jin-Yun Pan

    2006-07-01

    Full Text Available This study evaluated the deformations that contribute to Class III mandibular configuration, employing geometric morphometric analysis. Lateral cephalograms of male and female groups of 100 young adults and 70 children with Class III malocclusion were compared to those of counterparts with normal occlusion. The sample included an equal number of both genders. The cephalographs were traced, and 12 homologous landmarks were identified and digitized. Average mandibular geometries were generated by means of Procrustes analysis. Thin-plate spline analysis was then applied to mandibular configurations to determine local form differences in male and female groups of adults and children with normal occlusion and Class III malocclusion. The mandibular morphology was significantly different between these two groups of male and female adults, and children (p < 0.0001. This spline analysis revealed an anteroposterior elongation of the mandible along the condylion-gnathion axis, showing an extension in the regions of the mandibular condyle and ramus, and of the anteroinferior portion of the mandibular symphysis in Class III groups. More extension was evident in Class III adults. The deformations in subjects with Class III malocclusion may represent a developmental elongation of the mandible anteroposteriorly, which leads to the appearance of a prognathic mandibular profile.

  10. A comparative assessment of hip joints some morphometrical criteria for Rottweilers and other breed dogs

    International Nuclear Information System (INIS)

    Kozinda, O.; Bruveris, Z.

    2006-01-01

    The aim and objective of the investigation were to make the diagnosis of the hip dysplasia as impartial and precise as possible by using several x-ray morphometrical measurements, to make a comparative analysis of these measurements by using a linear regression analysis, and finally to calculate the value of these parameters and ranks. In total 36 radiogrammes of Rottweiler breed dogs and 24 radiogrammes of other breed dogs of different ages of both sexes, which belonged to owners, were used for the research. In each of the radiogramme 7 morhometrical measurements of the right and left hip joint were made: the Norberg angle, the inclination angle, the tangential angle, the geometrical centre placement of the CFH; the width of the lateral joint fissure gap the width of the medial joint fissure gap and distraction index. From the obtained results the following conclusions can be drawn: to make the diagnosis in dogs of Rottweiler breed, the most essential parameters are distraction index on right hip joint and the tangential angle and width of medial joint fissure on left hip joint

  11. Morphometric variation of extant platyrrhine molars: taxonomic implications for fossil platyrrhines

    Directory of Open Access Journals (Sweden)

    Mónica Nova Delgado

    2016-05-01

    Full Text Available The phylogenetic position of many fossil platyrrhines with respect to extant ones is not yet clear. Two main hypotheses have been proposed: the layered or successive radiations hypothesis suggests that Patagonian fossils are Middle Miocene stem platyrrhines lacking modern descendants, whereas the long lineage hypothesis argues for an evolutionary continuity of all fossil platyrrhines with the extant ones. Our geometric morphometric analysis of a 15 landmark-based configuration of platyrrhines’ first and second lower molars suggest that morphological stasis may explain the reduced molar shape variation observed. Platyrrhine lower molar shape might be a primitive retention of the ancestral state affected by strong ecological constraints throughout the radiation of the main platyrrhine families. The Patagonian fossil specimens showed two distinct morphological patterns of lower molars, Callicebus—like and Saguinus—like, which might be the precursors of the extant forms, whereas the Middle Miocene specimens, though showing morphological resemblances with the Patagonian fossils, also displayed new, derived molar patterns, Alouatta—like and Pitheciinae—like, thereby suggesting that despite the overall morphological stasis of molars, phenotypic diversification of molar shape was already settled during the Middle Miocene.

  12. Vitamin B12 deficiency: Characterization of psychometrics and MRI morphometrics.

    Science.gov (United States)

    Hsu, Yen-Hsuan; Huang, Ching-Feng; Lo, Chung-Ping; Wang, Tzu-Lan; Tu, Min-Chien

    2016-01-01

    Vitamin B12 is essential for the integrity of the central nervous system. However, performances in different cognitive domains relevant to vitamin B12 deficiency remain to be detailed. To date, there have been limited studies that examined the relationships between cognitions and structural neuroimaging in a single cohort of low-vitamin B12 status. The present study aimed to depict psychometrics and magnetic resonance imaging (MRI) morphometrics among patients with vitamin B12 deficiency, and to examine their inter-relations. We compared 34 consecutive patients with vitamin B12 deficiency (serum level ≤ 250 pg/ml) to 34 demographically matched controls by their cognitive performances and morphometric indices of brain MRI. The correlations between psychometrics and morphometrics were analyzed. The vitamin B12 deficiency group had lower scores than the controls on total scores of Mini-Mental Status Examination (MMSE) and Cognitive Abilities Screening Instrument (CASI) (both P psychometric and morphometric indices, pronounced correlations between bicaudate ratio and long-term memory, mental manipulation, orientation, language, and verbal fluency were noted (all P < 0.01). Vitamin B12 deficiency is associated with a global cognition decline with language, orientation, and mental manipulation selectively impaired. Preferential atrophy in frontal regions is the main neuroimaging feature. Although the frontal ratio highlights the relevant atrophy among patients, the bicaudate ratio might be the best index on the basis of its strong association with global cognition and related cognitive domains, implying dysfunction of fronto-subcortical circuits as the fundamental pathogenesis related to vitamin B12 deficiency.

  13. MORPHOMETRIC ASPECTS IN THE BÂRLAD BASIN

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    BĂLAN OANA

    2015-03-01

    Full Text Available Bârlad valley morphometry is strongly influenced by lithology, geological structure and climatic conditions. Between its springs and the outflow we noticed notable deviations from valley monocline structure and from the consecvent overall direction of the river system. Morphometric analysis of the Bârlad valley cumulates and summarizes the sequence of events that occurred in its hydrographic basin, which in turn has been actively reflected in indices such as generated the altimetry, the relief depth fragmentation.

  14. Physical and morphometric characterization of indigenous cattle of Assam

    Directory of Open Access Journals (Sweden)

    A. Haque

    2011-01-01

    Full Text Available The present investigation was undertaken to study the physical and morphometric characteristics in indigenous cattle of Assam. The data pertain to 339 indigenous cattle of different categories. The physical characteristics included colour pattern of body coat, muzzle, tail switch, hoof and horn. Body length, height at wither, heart girth, pouch girth, length of tail, switch, neck, ear and head were taken up for morphometric characterization. The main body coat colour of indigenous cattle was brown (31.18% followed by white (28.53%, fawn (15.29%, grey (13.53%, black (4.41% and mixed (7.06%. The prominent colour of tail switch was black (74.53%. Most of animals had black muzzle (86.47%, black hooves (84.71% and black horn (100%. Morphometric characteristics data obtained were classified according to location, age group and sex of the animal. The means for body length, height at wither, heart girth, pouch girth, length of tail, switch, neck, ear and head were 83.668±0.590, 91.942±0.55, 113.146±0.738, 121.181±0.761, 54.196±0.527, 26.098±0.186, 32.705±0.166, 18.131±0.111 and 35.035±0.195 cm respectively. Age and sex had significant effect on all the morphometric characters however, location effect was non significant. The indigenous cattle of Assam are comparatively smaller in size than most of the recognized breeds of cattle however coat colour showed sizeable variation. The data generated for indigenous cattle of Assam would be useful to characterize them.

  15. Morphometric Atlas Selection for Automatic Brachial Plexus Segmentation

    International Nuclear Information System (INIS)

    Van de Velde, Joris; Wouters, Johan; Vercauteren, Tom; De Gersem, Werner; Duprez, Fréderic; De Neve, Wilfried; Van Hoof, Tom

    2015-01-01

    Purpose: The purpose of this study was to determine the effects of atlas selection based on different morphometric parameters, on the accuracy of automatic brachial plexus (BP) segmentation for radiation therapy planning. The segmentation accuracy was measured by comparing all of the generated automatic segmentations with anatomically validated gold standard atlases developed using cadavers. Methods and Materials: Twelve cadaver computed tomography (CT) atlases (3 males, 9 females; mean age: 73 years) were included in the study. One atlas was selected to serve as a patient, and the other 11 atlases were registered separately onto this “patient” using deformable image registration. This procedure was repeated for every atlas as a patient. Next, the Dice and Jaccard similarity indices and inclusion index were calculated for every registered BP with the original gold standard BP. In parallel, differences in several morphometric parameters that may influence the BP segmentation accuracy were measured for the different atlases. Specific brachial plexus-related CT-visible bony points were used to define the morphometric parameters. Subsequently, correlations between the similarity indices and morphometric parameters were calculated. Results: A clear negative correlation between difference in protraction-retraction distance and the similarity indices was observed (mean Pearson correlation coefficient = −0.546). All of the other investigated Pearson correlation coefficients were weak. Conclusions: Differences in the shoulder protraction-retraction position between the atlas and the patient during planning CT influence the BP autosegmentation accuracy. A greater difference in the protraction-retraction distance between the atlas and the patient reduces the accuracy of the BP automatic segmentation result

  16. Geometric group theory an introduction

    CERN Document Server

    Löh, Clara

    2017-01-01

    Inspired by classical geometry, geometric group theory has in turn provided a variety of applications to geometry, topology, group theory, number theory and graph theory. This carefully written textbook provides a rigorous introduction to this rapidly evolving field whose methods have proven to be powerful tools in neighbouring fields such as geometric topology. Geometric group theory is the study of finitely generated groups via the geometry of their associated Cayley graphs. It turns out that the essence of the geometry of such groups is captured in the key notion of quasi-isometry, a large-scale version of isometry whose invariants include growth types, curvature conditions, boundary constructions, and amenability. This book covers the foundations of quasi-geometry of groups at an advanced undergraduate level. The subject is illustrated by many elementary examples, outlooks on applications, as well as an extensive collection of exercises.

  17. Geometric procedures for civil engineers

    CERN Document Server

    Tonias, Elias C

    2016-01-01

    This book provides a multitude of geometric constructions usually encountered in civil engineering and surveying practice.  A detailed geometric solution is provided to each construction as well as a step-by-step set of programming instructions for incorporation into a computing system. The volume is comprised of 12 chapters and appendices that may be grouped in three major parts: the first is intended for those who love geometry for its own sake and its evolution through the ages, in general, and, more specifically, with the introduction of the computer. The second section addresses geometric features used in the book and provides support procedures used by the constructions presented. The remaining chapters and the appendices contain the various constructions. The volume is ideal for engineering practitioners in civil and construction engineering and allied areas.

  18. Use of morphometric soil aggregates parameters to evaluate the reclamation process in mined areas located at amazon forest - Brazil

    Science.gov (United States)

    Ribeiro, A. I.; Fengler, F. H.; Longo, R. M.; Mello, G. F.; Damame, D. B.; Crowley, D. E.

    2015-12-01

    Brazil has a high mineral potential that have been explored over the years. A large fraction of these mineral resources are located in Amazon region, which is known for its large biodiversity and world climate importance. As the policies that control the Amazon preservation are relatively new, several mining activities have been exploring the Amazon territory, promoting a large process of degradation. Once the mining activities have a high potential of environmental changes the government created polices to restrain the mining in Amazon forests and obligate mining companies to reclaim theirs minded areas. However, the measurement of reclamation development still is a challenging task for the Professionals involved. The volume and complexity of the variables, allied to the difficulty in identifying the reclamation of ecosystem functionalities are still lack to ensure the reclamation success. In this sense this work aims to investigate the representativeness of morphometric soil aggregates parameters in the understanding of reclamation development. The study area is located in the National Forest of Jamari, State of Rondônia. In the past mining companies explored the region producing eight closed mines that are now in reclamation process. The soil aggregates morphometric measurements: geometric mean diameter (GMD), aggregate circularity index, and aggregate roundness, were choose based in its obtaining facility, and their association to biological activity. To achieve the proposed objective the aggregates of eight sites in reclamation, from different closed mines, where chosen and compared to Amazon forest and open mine soil aggregates. The results were analyzed to one way ANOVA to identifying differences between areas in reclamation, natural ecosystem, and open mine. It was obtained differences for GMD and circularity index. However, only the circularity index allowed to identifying differences between the reclamation sites. The results allowed concluding: (1

  19. An introduction to geometrical physics

    CERN Document Server

    Aldrovandi, R

    1995-01-01

    This book stresses the unifying power of the geometrical framework in bringing together concepts from the different areas of physics. Common underpinnings of optics, elasticity, gravitation, relativistic fields, particle mechanics and other subjects are underlined. It attempts to extricate the notion of space currently in the physical literature from the metric connotation.The book's goal is to present mathematical ideas associated with geometrical physics in a rather introductory language. Included are many examples from elementary physics and also, for those wishing to reach a higher level o

  20. Geometric scaling as traveling waves

    International Nuclear Information System (INIS)

    Munier, S.; Peschanski, R.

    2003-01-01

    We show the relevance of the nonlinear Fisher and Kolmogorov-Petrovsky-Piscounov (KPP) equation to the problem of high energy evolution of the QCD amplitudes. We explain how the traveling wave solutions of this equation are related to geometric scaling, a phenomenon observed in deep-inelastic scattering experiments. Geometric scaling is for the first time shown to result from an exact solution of nonlinear QCD evolution equations. Using general results on the KPP equation, we compute the velocity of the wave front, which gives the full high energy dependence of the saturation scale

  1. Geometric integration for particle accelerators

    International Nuclear Information System (INIS)

    Forest, Etienne

    2006-01-01

    This paper is a very personal view of the field of geometric integration in accelerator physics-a field where often work of the highest quality is buried in lost technical notes or even not published; one has only to think of Simon van der Meer Nobel prize work on stochastic cooling-unpublished in any refereed journal. So I reconstructed the relevant history of geometrical integration in accelerator physics as much as I could by talking to collaborators and using my own understanding of the field. The reader should not be too surprised if this account is somewhere between history, science and perhaps even fiction

  2. Geometrical spin symmetry and spin

    International Nuclear Information System (INIS)

    Pestov, I. B.

    2011-01-01

    Unification of General Theory of Relativity and Quantum Mechanics leads to General Quantum Mechanics which includes into itself spindynamics as a theory of spin phenomena. The key concepts of spindynamics are geometrical spin symmetry and the spin field (space of defining representation of spin symmetry). The essence of spin is the bipolar structure of geometrical spin symmetry induced by the gravitational potential. The bipolar structure provides a natural derivation of the equations of spindynamics. Spindynamics involves all phenomena connected with spin and provides new understanding of the strong interaction.

  3. Geometric integration for particle accelerators

    Science.gov (United States)

    Forest, Étienne

    2006-05-01

    This paper is a very personal view of the field of geometric integration in accelerator physics—a field where often work of the highest quality is buried in lost technical notes or even not published; one has only to think of Simon van der Meer Nobel prize work on stochastic cooling—unpublished in any refereed journal. So I reconstructed the relevant history of geometrical integration in accelerator physics as much as I could by talking to collaborators and using my own understanding of the field. The reader should not be too surprised if this account is somewhere between history, science and perhaps even fiction.

  4. Lattice degeneracies of geometric fermions

    International Nuclear Information System (INIS)

    Raszillier, H.

    1983-05-01

    We give the minimal numbers of degrees of freedom carried by geometric fermions on all lattices of maximal symmetries in d = 2, 3, and 4 dimensions. These numbers are lattice dependent, but in the (free) continuum limit, part of the degrees of freedom have to escape to infinity by a Wilson mechanism built in, and 2sup(d) survive for any lattice. On self-reciprocal lattices we compare the minimal numbers of degrees of freedom of geometric fermions with the minimal numbers of naive fermions on these lattices and argue that these numbers are equal. (orig.)

  5. A geometric form of the canonical commutation

    International Nuclear Information System (INIS)

    Guz, W.

    1987-01-01

    Some aspects of a geometric approach to quantum theory, in which the quantum-mechanical position and momentum operators are represented by covariant derivatives, are here developed. Here, the previously estabilished formalism of Caianiello and his co-workers is extended to the case of an integrable almost complex Hermitian manifold. The general theory is then applied to the two-dimensional case, where the structure of the 'quantum geometry' induced in the manifold by the quantum-mechanical CCR can be explicitly determined

  6. Geometric Algebra Techniques in Flux Compactifications

    International Nuclear Information System (INIS)

    Coman, Ioana Alexandra; Lazaroiu, Calin Iuliu; Babalic, Elena Mirela

    2016-01-01

    We study “constrained generalized Killing (s)pinors,” which characterize supersymmetric flux compactifications of supergravity theories. Using geometric algebra techniques, we give conceptually clear and computationally effective methods for translating supersymmetry conditions into differential and algebraic constraints on collections of differential forms. In particular, we give a synthetic description of Fierz identities, which are an important ingredient of such problems. As an application, we show how our approach can be used to efficiently treat N=1 compactification of M-theory on eight manifolds and prove that we recover results previously obtained in the literature.

  7. Vehicle ego-motion estimation with geometric algebra

    NARCIS (Netherlands)

    Mark, W. van der; Fontijne, D.; Dorst, L.; Groen, F.C.A.

    2003-01-01

    A method for estimating ego-motion with vehicle mounted stereo cameras is presented. This approach is based on finding corresponding features in stereo images and tracking them between succeeding stereo frames. Our approach estimates stereo ego-motion with geometric algebra techniques. Starting with

  8. Time Series Analysis Using Geometric Template Matching.

    Science.gov (United States)

    Frank, Jordan; Mannor, Shie; Pineau, Joelle; Precup, Doina

    2013-03-01

    We present a novel framework for analyzing univariate time series data. At the heart of the approach is a versatile algorithm for measuring the similarity of two segments of time series called geometric template matching (GeTeM). First, we use GeTeM to compute a similarity measure for clustering and nearest-neighbor classification. Next, we present a semi-supervised learning algorithm that uses the similarity measure with hierarchical clustering in order to improve classification performance when unlabeled training data are available. Finally, we present a boosting framework called TDEBOOST, which uses an ensemble of GeTeM classifiers. TDEBOOST augments the traditional boosting approach with an additional step in which the features used as inputs to the classifier are adapted at each step to improve the training error. We empirically evaluate the proposed approaches on several datasets, such as accelerometer data collected from wearable sensors and ECG data.

  9. Analysing the floral elements of the lost tree of Easter Island: a morphometric comparison between the remaining ex-situ lines of the endemic extinct species Sophora toromiro.

    Science.gov (United States)

    Püschel, Thomas A; Espejo, Jaime; Sanzana, María-José; Benítez, Hugo A

    2014-01-01

    Sophora toromiro (Phil) Skottsb. is a species that has been extinct in its natural habitat Easter Island (Rapa Nui) for over 50 years. However, seed collections carried out before its extinction have allowed its persistence ex-situ in different botanical gardens and private collections around the world. The progenies of these diverse collections have been classified in different lines, most of them exhibiting high similarity as corroborated by molecular markers. In spite of this resemblance observed between the different lines, one of them (Titze) has dissimilar floral elements, thus generating doubts regarding its species classification. The floral elements (wing, standard and keel) belonging to three different S. toromiro lines and two related species were analyzed using geometric morphometrics. This method was applied in order to quantify the floral shape variation of the standard, wing, and keel between the different lines and control species. Geometric morphometrics analyses were able to distinguish the floral elements at both intra (lines) and inter-specific levels. The present results are on line with the cumulative evidence that supports the Titze line as not being a proper member of the S. toromiro species, but probably a hybridization product or even another species of the Edwardsia section. The reintroduction programs of S. toromiro should consider this information when assessing the authenticity and origin of the lines that will be used to repopulate the island.

  10. Analysing the floral elements of the lost tree of Easter Island: a morphometric comparison between the remaining ex-situ lines of the endemic extinct species Sophora toromiro.

    Directory of Open Access Journals (Sweden)

    Thomas A Püschel

    Full Text Available Sophora toromiro (Phil Skottsb. is a species that has been extinct in its natural habitat Easter Island (Rapa Nui for over 50 years. However, seed collections carried out before its extinction have allowed its persistence ex-situ in different botanical gardens and private collections around the world. The progenies of these diverse collections have been classified in different lines, most of them exhibiting high similarity as corroborated by molecular markers. In spite of this resemblance observed between the different lines, one of them (Titze has dissimilar floral elements, thus generating doubts regarding its species classification. The floral elements (wing, standard and keel belonging to three different S. toromiro lines and two related species were analyzed using geometric morphometrics. This method was applied in order to quantify the floral shape variation of the standard, wing, and keel between the different lines and control species. Geometric morphometrics analyses were able to distinguish the floral elements at both intra (lines and inter-specific levels. The present results are on line with the cumulative evidence that supports the Titze line as not being a proper member of the S. toromiro species, but probably a hybridization product or even another species of the Edwardsia section. The reintroduction programs of S. toromiro should consider this information when assessing the authenticity and origin of the lines that will be used to repopulate the island.

  11. Geometric modeling in the problem of ball bearing accuracy

    Science.gov (United States)

    Glukhov, V. I.; Pushkarev, V. V.; Khomchenko, V. G.

    2017-06-01

    The manufacturing quality of ball bearings is an urgent problem for machine-building industry. The aim of the research is to improve the geometric specifications accuracy of bearings based on evidence-based systematic approach and the method of adequate size, location and form deviations modeling of the rings and assembled ball bearings. The present work addressed the problem of bearing geometric specifications identification and the study of these specifications. The deviation from symmetric planar of rings and bearings assembly and mounting width are among these specifications. A systematic approach to geometric specifications values and ball bearings tolerances normalization in coordinate systems will improve the quality of bearings by optimizing and minimizing the number of specifications. The introduction of systematic approach to the international standards on rolling bearings is a guarantee of a significant increase in accuracy of bearings and the quality of products where they are applied.

  12. Height and Tilt Geometric Texture

    DEFF Research Database (Denmark)

    Andersen, Vedrana; Desbrun, Mathieu; Bærentzen, Jakob Andreas

    2009-01-01

    compromise between functionality and simplicity: it can efficiently handle and process geometric texture too complex to be represented as a height field, without having recourse to full blown mesh editing algorithms. The height-and-tilt representation proposed here is fully intrinsic to the mesh, making...

  13. In Defence of Geometrical Algebra

    NARCIS (Netherlands)

    Blasjo, V.N.E.

    The geometrical algebra hypothesis was once the received interpretation of Greek mathematics. In recent decades, however, it has become anathema to many. I give a critical review of all arguments against it and offer a consistent rebuttal case against the modern consensus. Consequently, I find that

  14. Geometrical interpretation of extended supergravity

    International Nuclear Information System (INIS)

    Townsend, P.K.; Nieuwenhuizen, P.van

    1977-01-01

    SO 2 extended supergravity is shown to be a geometrical theory, whose underlying gauge group is OSp(4,2). The couplings which gauge the SO 2 symmetry as well as the accompanying cosmological and masslike terms are directly obtained, and the usual SO 2 model is obtained after a Wigner-Inoenue group contraction. (Auth.)

  15. Geometric scaling in exclusive processes

    International Nuclear Information System (INIS)

    Munier, S.; Wallon, S.

    2003-01-01

    We show that according to the present understanding of the energy evolution of the observables measured in deep-inelastic scattering, the photon-proton scattering amplitude has to exhibit geometric scaling at each impact parameter. We suggest a way to test this experimentally at HERA. A qualitative analysis based on published data is presented and discussed. (orig.)

  16. Geometric quantization and general relativity

    International Nuclear Information System (INIS)

    Souriau, J.-M.

    1977-01-01

    The purpose of geometric quantization is to give a rigorous mathematical content to the 'correspondence principle' between classical and quantum mechanics. The main tools are borrowed on one hand from differential geometry and topology (differential manifolds, differential forms, fiber bundles, homology and cohomology, homotopy), on the other hand from analysis (functions of positive type, infinite dimensional group representations, pseudo-differential operators). Some satisfactory results have been obtained in the study of dynamical systems, but some fundamental questions are still waiting for an answer. The 'geometric quantization of fields', where some further well known difficulties arise, is still in a preliminary stage. In particular, the geometric quantization on the gravitational field is still a mere project. The situation is even more uncertain due to the fact that there is no experimental evidence of any quantum gravitational effect which could give us a hint towards what we are supposed to look for. The first level of both Quantum Theory, and General Relativity describes passive matter: influence by the field without being a source of it (first quantization and equivalence principle respectively). In both cases this is only an approximation (matter is always a source). But this approximation turns out to be the least uncertain part of the description, because on one hand the first quantization avoids the problems of renormalization and on the other hand the equivalence principle does not imply any choice of field equations (it is known that one can modify Einstein equations at short distances without changing their geometrical properties). (Auth.)

  17. Geometric origin of central charges

    International Nuclear Information System (INIS)

    Lukierski, J.; Rytel, L.

    1981-05-01

    The complete set of N(N-1) central charge generators for D=4 N-extended super Poincare algebra is obtained by suitable contraction of OSp (2N; 4) superalgebra. The superspace realizations of the spinorial generators with central charges are derived. The conjugate set of N(N-1) additional bosonic superspace coordinates is introduced in an unique and geometric way. (author)

  18. Geometric phases and quantum computation

    International Nuclear Information System (INIS)

    Vedral, V.

    2005-01-01

    Full text: In my lectures I will talk about the notion of the geometric phase and explain its relevance for both fundamental quantum mechanics as well as quantum computation. The phase will be at first introduced via the idea of Pancharatnam which involves interference of three or more light beams. This notion will then be generalized to the evolving quantum systems. I will discuss both pure and mixed states as well as unitary and non-unitary evolutions. I will also show how the concept of the vacuum induced geometric phase arises in quantum optics. A simple measurement scheme involving a Mach Zehnder interferometer will be presented and will be used to illustrate all the concepts in the lecture. Finally, I will expose a simple generalization of the geometric phase to evolving degenerate states. This will be seen to lead to the possibility of universal quantum computation using geometric effects only. Moreover, this contains a promise of intrinsically fault tolerant quantum information processing, whose prospects will be outlined at the end of the lecture. (author)

  19. Cartan's geometrical structure of supergravity

    International Nuclear Information System (INIS)

    Baaklini, N.S.

    1977-06-01

    The geometrical partnership of the vierbein and the spin-3/2 field in the structure of the supergravity Lagrangian is emphasized. Both fields are introduced as component of the same matrix differential form. The only local symmetry of the theory is SL(2,C)

  20. Identification of cryptic species within the Praon abjectum group (Hymenoptera: Braconidae: Aphidiinae) using molecular markers and morphometric geometrics

    Czech Academy of Sciences Publication Activity Database

    Mitrovski Bogdanović, A.; Petrović, A.; Mitrović, M.; Ivanović, A.; Žikić, V.; Starý, Petr; Vorburger, C.; Tomanović, Ž.

    2013-01-01

    Roč. 106, č. 2 (2013), s. 170-180 ISSN 0013-8746 Grant - others:The Ministry of Education and Science of the Republic of Serbia(RS) III43001; Swiss National Science Foundation(CH) IZ73Z0_1_28174 Institutional support: RVO:60077344 Keywords : aphid parasitoids * host specialization * Praon sambuci sp. n. Subject RIV: EG - Zoology Impact factor: 1.174, year: 2013

  1. Dentine morphology of Atapuerca-Sima de los Huesos lower molars: Evolutionary implications through three-dimensional geometric morphometric analysis.

    Science.gov (United States)

    Hanegraef, Hester; Martinón-Torres, María; Martínez de Pinillos, Marina; Martín-Francés, Laura; Vialet, Amélie; Arsuaga, Juan Luis; Bermúdez de Castro, José María

    2018-02-08

    This study aims to explore the affinities of the Sima de los Huesos (SH) population in relation to Homo neanderthalensis, Arago, and early and contemporary Homo sapiens. By characterizing SH intra-population variation, we test current models to explain the Neanderthal origins. Three-dimensional reconstructions of dentine surfaces of lower first and second molars were produced by micro-computed tomography. Landmarks and sliding semilandmarks were subjected to generalized Procrustes analysis and principal components analysis. SH is often similar in shape to Neanderthals, and both groups are generally discernible from Homo sapiens. For example, the crown height of SH and Neanderthals is lower than for modern humans. Differences in the presence of a mid-trigonid crest are also observed, with contemporary Homo sapiens usually lacking this feature. Although SH and Neanderthals show strong affinities, they can be discriminated based on certain traits. SH individuals are characterized by a lower intra-population variability, and show a derived dental reduction in lower second molars compared to Neanderthals. SH also differs in morphological features from specimens that are often classified as Homo heidelbergensis, such as a lower crown height and less pronounced mid-trigonid crest in the Arago fossils. Our results are compatible with the idea that multiple evolutionary lineages or populations coexisted in Europe during the Middle Pleistocene, with the SH paradigm phylogenetically closer to Homo neanderthalensis. Further research could support the possibility of SH as a separate taxon. Alternatively, SH could be a subspecies of Neanderthals, with the variability of this clade being remarkably higher than previously thought. © 2018 Wiley Periodicals, Inc.

  2. Pig Domestication and Human-Mediated Dispersal in Western Eurasia Revealed through Ancient DNA and Geometric Morphometrics

    NARCIS (Netherlands)

    Ottoni, Claudio; Flink, Linus Girdland; Evin, Allowen; Geoerg, Christina; De Cupere, Bea; Van Neer, Wim; Bartosiewicz, Laszlo; Linderholm, Anna; Barnett, Ross; Peters, Joris; Decorte, Ronny; Waelkens, Marc; Vanderheyden, Nancy; Ricaut, Francois-Xavier; Cakirlar, Canan; Cevik, Ozlem; Hoelzel, A. Rus; Mashkour, Marjan; Karimlu, Azadeh Fatemeh Mohaseb; Seno, Shiva Sheikhi; Daujat, Julie; Brock, Fiona; Pinhasi, Ron; Hongo, Hitomi; Perez-Enciso, Miguel; Rasmussen, Morten; Frantz, Laurent; Megens, Hendrik-Jan; Crooijmans, Richard; Groenen, Martien; Arbuckle, Benjamin; Benecke, Nobert; Vidarsdottir, Una Strand; Burger, Joachim; Cucchi, Thomas; Dobney, Keith; Larson, Greger

    Zooarcheological evidence suggests that pigs were domesticated in Southwest Asia similar to 8,500 BC. They then spread across the Middle and Near East and westward into Europe alongside early agriculturalists. European pigs were either domesticated independently or more likely appeared so as a

  3. Pig Domestication and Human-Mediated Dispersal in Western Eurasia Revealed through Ancient DNA and Geometric Morphometrics

    NARCIS (Netherlands)

    Ottoni, C.; Flink, L.G.; Evin, A.; Georg, C.; Cupere, De B.; Neer, van W.; Bartosiewicz, L.; Linderholm, A.; Barnett, R.; Peters, J.; Decorte, R.; Waelkens, M.; Vanderheyden, N.; Ricaut, F.X.; Cakirlar, C.; Cevik, O.; Hoelzel, A.R.; Mashkour, M.; Karimlu, A.F.M.; Seno, S.S.; Daujat, J.; Brock, F.; Pinhasi, R.; Hongo, H.; Perez-Enciso, M.; Rasmussen, M.; Frantz, L.A.F.; Megens, H.J.W.C.; Crooijmans, R.P.M.A.; Groenen, M.A.M.; Arbuckle, B.; Benecke, N.; Vidarsdottir, U.S.; Burger, J.; Cucchi, T.; Dobney, K.; Larson, G.

    2013-01-01

    Zooarcheological evidence suggests that pigs were domesticated in Southwest Asia ~8,500 BC. They then spread across the Middle and Near East and westward into Europe alongside early agriculturalists. European pigs were either domesticated independently or more likely appeared so as a result of

  4. Geometric Transformations in Engineering Geometry

    Directory of Open Access Journals (Sweden)

    I. F. Borovikov

    2015-01-01

    Full Text Available Recently, for business purposes, in view of current trends and world experience in training engineers, research and faculty staff there has been a need to transform traditional courses of descriptive geometry into the course of engineering geometry in which the geometrical transformations have to become its main section. On the basis of critical analysis the paper gives suggestions to improve a presentation technique of this section both in the classroom and in academic literature, extend an application scope of geometrical transformations to solve the position and metric tasks and simulation of surfaces, as well as to design complex engineering configurations, which meet a number of pre-specified conditions.The article offers to make a number of considerable amendments to the terms and definitions used in the existing courses of descriptive geometry. It draws some conclusions and makes the appropriate proposals on feasibility of coordination in teaching the movement transformation in the courses of analytical and descriptive geometry. This will provide interdisciplinary team teaching and allow students to be convinced that a combination of analytical and graphic ways to solve geometric tasks is useful and reasonable.The traditional sections of learning courses need to be added with a theory of projective and bi-rational transformations. In terms of application simplicity and convenience it is enough to consider the central transformations when solving the applied tasks. These transformations contain a beam of sub-invariant (low-invariant straight lines on which the invariant curve induces non-involution and involution projectivities. The expediency of nonlinear transformations application is shown in the article by a specific example of geometric modeling of the interfacing surface "spar-blade".Implementation of these suggestions will contribute to a real transformation of a traditional course of descriptive geometry to the engineering geometry

  5. Morphometric image analysis of giant vesicles

    DEFF Research Database (Denmark)

    Husen, Peter Rasmussen; Arriaga, Laura; Monroy, Francisco

    2012-01-01

    We have developed a strategy to determine lengths and orientations of tie lines in the coexistence region of liquid-ordered and liquid-disordered phases of cholesterol containing ternary lipid mixtures. The method combines confocal-fluorescence-microscopy image stacks of giant unilamellar vesicles...... (GUVs), a dedicated 3D-image analysis, and a quantitative analysis based in equilibrium thermodynamic considerations. This approach was tested in GUVs composed of 1,2-dioleoyl-sn-glycero-3-phosphocholine/1,2-palmitoyl-sn-glycero-3-phosphocholine/cholesterol. In general, our results show a reasonable...... agreement with previously reported data obtained by other methods. For example, our computed tie lines were found to be nonhorizontal, indicating a difference in cholesterol content in the coexisting phases. This new, to our knowledge, analytical strategy offers a way to further exploit fluorescence...

  6. Continuous-variable geometric phase and its manipulation for quantum computation in a superconducting circuit.

    Science.gov (United States)

    Song, Chao; Zheng, Shi-Biao; Zhang, Pengfei; Xu, Kai; Zhang, Libo; Guo, Qiujiang; Liu, Wuxin; Xu, Da; Deng, Hui; Huang, Keqiang; Zheng, Dongning; Zhu, Xiaobo; Wang, H

    2017-10-20

    Geometric phase, associated with holonomy transformation in quantum state space, is an important quantum-mechanical effect. Besides fundamental interest, this effect has practical applications, among which geometric quantum computation is a paradigm, where quantum logic operations are realized through geometric phase manipulation that has some intrinsic noise-resilient advantages and may enable simplified implementation of multi-qubit gates compared to the dynamical approach. Here we report observation of a continuous-variable geometric phase and demonstrate a quantum gate protocol based on this phase in a superconducting circuit, where five qubits are controllably coupled to a resonator. Our geometric approach allows for one-step implementation of n-qubit controlled-phase gates, which represents a remarkable advantage compared to gate decomposition methods, where the number of required steps dramatically increases with n. Following this approach, we realize these gates with n up to 4, verifying the high efficiency of this geometric manipulation for quantum computation.

  7. On chromatic and geometrical calibration

    DEFF Research Database (Denmark)

    Folm-Hansen, Jørgen

    1999-01-01

    The main subject of the present thesis is different methods for the geometrical and chromatic calibration of cameras in various environments. For the monochromatic issues of the calibration we present the acquisition of monochrome images, the classic monochrome aberrations and the various sources...... the correct interpolation method is described. For the chromatic issues of calibration we present the acquisition of colour and multi-spectral images, the chromatic aberrations and the various lens/camera based non-uniformities of the illumination of the image plane. It is described how the monochromatic...... to design calibration targets for both geometrical and chromatic calibration are described. We present some possible systematical errors on the detection of the objects in the calibration targets, if viewed in a non orthogonal angle, if the intensities are uneven or if the image blurring is uneven. Finally...

  8. Geometrical interpretation of optical absorption

    Energy Technology Data Exchange (ETDEWEB)

    Monzon, J. J.; Barriuso, A. G.; Sanchez-Soto, L. L. [Departamento de Optica, Facultad de Fisica, Universidad Complutense, E-28040 Madrid (Spain); Montesinos-Amilibia, J. M. [Departamento de Geometria y Topologia, Facultad de Matematicas, Universidad Complutense, E-28040 Madrid (Spain)

    2011-08-15

    We reinterpret the transfer matrix for an absorbing system in very simple geometrical terms. In appropriate variables, the system appears as performing a Lorentz transformation in a (1 + 3)-dimensional space. Using homogeneous coordinates, we map that action on the unit sphere, which is at the realm of the Klein model of hyperbolic geometry. The effects of absorption appear then as a loxodromic transformation, that is, a rhumb line crossing all the meridians at the same angle.

  9. Parametric FEM for geometric biomembranes

    Science.gov (United States)

    Bonito, Andrea; Nochetto, Ricardo H.; Sebastian Pauletti, M.

    2010-05-01

    We consider geometric biomembranes governed by an L2-gradient flow for bending energy subject to area and volume constraints (Helfrich model). We give a concise derivation of a novel vector formulation, based on shape differential calculus, and corresponding discretization via parametric FEM using quadratic isoparametric elements and a semi-implicit Euler method. We document the performance of the new parametric FEM with a number of simulations leading to dumbbell, red blood cell and toroidal equilibrium shapes while exhibiting large deformations.

  10. Riemannian geometry and geometric analysis

    CERN Document Server

    Jost, Jürgen

    2017-01-01

    This established reference work continues to provide its readers with a gateway to some of the most interesting developments in contemporary geometry. It offers insight into a wide range of topics, including fundamental concepts of Riemannian geometry, such as geodesics, connections and curvature; the basic models and tools of geometric analysis, such as harmonic functions, forms, mappings, eigenvalues, the Dirac operator and the heat flow method; as well as the most important variational principles of theoretical physics, such as Yang-Mills, Ginzburg-Landau or the nonlinear sigma model of quantum field theory. The present volume connects all these topics in a systematic geometric framework. At the same time, it equips the reader with the working tools of the field and enables her or him to delve into geometric research.  The 7th edition has been systematically reorganized and updated. Almost no page has been left unchanged. It also includes new material, for instance on symplectic geometry, as well as the B...

  11. Optimization of biotechnological systems through geometric programming

    Directory of Open Access Journals (Sweden)

    Torres Nestor V

    2007-09-01

    Full Text Available Abstract Background In the past, tasks of model based yield optimization in metabolic engineering were either approached with stoichiometric models or with structured nonlinear models such as S-systems or linear-logarithmic representations. These models stand out among most others, because they allow the optimization task to be converted into a linear program, for which efficient solution methods are widely available. For pathway models not in one of these formats, an Indirect Optimization Method (IOM was developed where the original model is sequentially represented as an S-system model, optimized in this format with linear programming methods, reinterpreted in the initial model form, and further optimized as necessary. Results A new method is proposed for this task. We show here that the model format of a Generalized Mass Action (GMA system may be optimized very efficiently with techniques of geometric programming. We briefly review the basics of GMA systems and of geometric programming, demonstrate how the latter may be applied to the former, and illustrate the combined method with a didactic problem and two examples based on models of real systems. The first is a relatively small yet representative model of the anaerobic fermentation pathway in S. cerevisiae, while the second describes the dynamics of the tryptophan operon in E. coli. Both models have previously been used for benchmarking purposes, thus facilitating comparisons with the proposed new method. In these comparisons, the geometric programming method was found to be equal or better than the earlier methods in terms of successful identification of optima and efficiency. Conclusion GMA systems are of importance, because they contain stoichiometric, mass action and S-systems as special cases, along with many other models. Furthermore, it was previously shown that algebraic equivalence transformations of variables are sufficient to convert virtually any types of dynamical models into

  12. Morphologic and Morphometric Analysis of Lingula in Localizing Mandibular Foramen with its Surgical Importance

    Directory of Open Access Journals (Sweden)

    Phalguni Srimani

    2017-10-01

    Full Text Available Introduction: Morphologic and morphometric evaluation of mandible is clinically important. Considering the close relationship of lingula with neurovascular structures entering through mandibular foramen, lingula is often used as an important bony landmark during oral and maxillofacial surgical approach and inferior alveolar nerve block anaesthesia. Inadequate anatomical knowledge may result various intra operative complications like haemorrhge, fractures and nerve injury. Also, structural variations of lingula followed by inaccurate localization of mandibular foramen have been implicated as causative factor for unsuccessful inferior alveolar nerve block anaesthesia. Aim: To determine morphological and morphometric variations related to lingula of mandible in localizing mandibular foramen and to compare the results with similar type of osteological studies performed earlier on different population group. Materials and Methods: The study was performed on 36 adult dry human mandibles on both sides to categorize lingula according to its various shapes and determine the location of lingula based on surrounding mandibular landmarks by using Vernier caliper as 5 distances from tip of lingula as follows: i to anterior border of ramus of mandible; ii to posterior border of ramus of mandible; iii to centre of mandibular notch; iv to the alveolar socket of second molar tooth; and v to the base of mandible. The present study also indicated bilingual distance between tips of lingula of both sides. Data collected were analyzed statistically. Results: The most common shape of lingula was observed as triangular (51.39% followed by truncated (23.61%, then nodular (20.83% and assimilated (4.17% as least prevalent type. The average distances of tip of lingula from anterior and posterior borders of ramus of mandible were 18.21±1.50 mm and 16.33±1.21 mm respectively. On average, the tip of lingula was situated at 18.17±1.51 mm, 33.40±2.11 mm and 32.07±2.68 mm

  13. Morphometric analysis of cinder cones on Tenerife (Canary Islands, Spain): results and applications

    International Nuclear Information System (INIS)

    Doniz Paez, F. J.

    2009-01-01

    This paper applied morphometric to the cinder cones of Tenerife. The technical morphometric allows to establish simple models of morphology, and size to the most frequent volcanoes of Tenerife's mafic volcanism. The obtained classification allow to distinguish four morphological types of scoria cones and three size groups, which is also extended to other volcanic regions. (Author) 5 refs.

  14. Morphometric features of a low-elevation urban catchment and the ...

    African Journals Online (AJOL)

    River basin morphometric is a geomorphological tool that applies to physical measurements about a river form, from which can be derived quantities that explain its characteristics, such as size, shape, stream network and discharge. This paper used basin morphometric to assess flood occurrence in Port Harcourt, Nigeria.

  15. Exact Solutions for Einstein's Hyperbolic Geometric Flow

    International Nuclear Information System (INIS)

    He Chunlei

    2008-01-01

    In this paper we investigate the Einstein's hyperbolic geometric flow and obtain some interesting exact solutions for this kind of flow. Many interesting properties of these exact solutions have also been analyzed and we believe that these properties of Einstein's hyperbolic geometric flow are very helpful to understanding the Einstein equations and the hyperbolic geometric flow

  16. Morphometric analysis of the fascicular organisation of the optic nerve

    Directory of Open Access Journals (Sweden)

    Radunović Miroslav

    2015-01-01

    Full Text Available Background/Aim. The optic nerve is anatomically observed in four segments: intrabulbar, orbital, canalicular, and cranial. According to the literature, the surface of the transversal cut of the nerve is different through it. The aim of this study was to evaluate the fascicular organisation of the optic nerve, throughout its three segments from the eye. Methods. Five pairs of optic nerves, obtained from the autopsies were examined. Using Heidenhain's (azan staining, the cuts were prepared for microscopy. Morphometric analysis was performed using the stereological methods for morphometric cytology - the Weible’s testing system M42. The following measures were established: the surface of the transverse cut of the nerve, the entire surface of fasciculi, the entire surface of connective tissue and blood vessels, the number of fasciculi, the surface of a single fasciculus. Results. The surface of the transverse cut of the nerve was found to grow from the orbital to the cranial segment, as well as the entire surface of fasciculi. While their number is significantly lower in the cranial segment, the number of fasciculi varied slightly between the orbital and the canalicular segment. The surface of a single fasciculus grows from the bulb to the chiasma. There is probable a cause to believe that this may be due to fusion of the “small” fasciculi in the orbitocranial direction. Conclusion. There are significant differences among the examined parameters of the different parts of the optic nerve.

  17. Applications of wavelets in morphometric analysis of medical images

    Science.gov (United States)

    Davatzikos, Christos; Tao, Xiaodong; Shen, Dinggang

    2003-11-01

    Morphometric analysis of medical images is playing an increasingly important role in understanding brain structure and function, as well as in understanding the way in which these change during development, aging and pathology. This paper presents three wavelet-based methods with related applications in morphometric analysis of magnetic resonance (MR) brain images. The first method handles cases where very limited datasets are available for the training of statistical shape models in the deformable segmentation. The method is capable of capturing a larger range of shape variability than the standard active shape models (ASMs) can, by using the elegant spatial-frequency decomposition of the shape contours provided by wavelet transforms. The second method addresses the difficulty of finding correspondences in anatomical images, which is a key step in shape analysis and deformable registration. The detection of anatomical correspondences is completed by using wavelet-based attribute vectors as morphological signatures of voxels. The third method uses wavelets to characterize the morphological measurements obtained from all voxels in a brain image, and the entire set of wavelet coefficients is further used to build a brain classifier. Since the classification scheme operates in a very-high-dimensional space, it can determine subtle population differences with complex spatial patterns. Experimental results are provided to demonstrate the performance of the proposed methods.

  18. Application of Multilevel Models to Morphometric Data. Part 2. Correlations

    Directory of Open Access Journals (Sweden)

    O. Tsybrovskyy

    2003-01-01

    Full Text Available Multilevel organization of morphometric data (cells are “nested” within patients requires special methods for studying correlations between karyometric features. The most distinct feature of these methods is that separate correlation (covariance matrices are produced for every level in the hierarchy. In karyometric research, the cell‐level (i.e., within‐tumor correlations seem to be of major interest. Beside their biological importance, these correlation coefficients (CC are compulsory when dimensionality reduction is required. Using MLwiN, a dedicated program for multilevel modeling, we show how to use multivariate multilevel models (MMM to obtain and interpret CC in each of the levels. A comparison with two usual, “single‐level” statistics shows that MMM represent the only way to obtain correct cell‐level correlation coefficients. The summary statistics method (take average values across each patient produces patient‐level CC only, and the “pooling” method (merge all cells together and ignore patients as units of analysis yields incorrect CC at all. We conclude that multilevel modeling is an indispensable tool for studying correlations between morphometric variables.

  19. EVOLUTION OF MORPHOMETRIC MEASURES IN THE MANGALARGA MARCHADOR BREED

    Directory of Open Access Journals (Sweden)

    JULIANO MARTINS SANTIAGO

    2016-01-01

    Full Text Available The Mangalarga Marchador breed accounts for the largest horse herd in Brazil and has been experiencing national and international expansion. Nevertheless, there is little scientific production on the evolution of this breed and there are no studies on the morphometric transformations that took place during its formation. In this context, the present study aimed to assess the evolution in morphometric measures of the Mangalarga Marchador breed between 1970 and 2010. The research used information archived at the Brazilian Association of Mangalarga Marchador Breeders from 23,148 males and 92,980 females in a completely randomized experimental design. The six treatments consisted of the animals measured between 1970 and 1979, 1980 and 1989, 1990 and 1994, 1995 and 1999, 2000 and 2004, and 2005 and 2010, respectively. The measures assessed were: height at withers and croup, length of the head, neck, back, croup, shoulder, and body, width of the head and croup, thoracic circumference, and cannon circumference Over the period analyzed, males and females experienced a reduction in thoracic circumference, in the lengths of the head, back, croup, and shoulder, and in the widths of the head and croup. In the males, neck length and cannon circumference also decreased, while body length increased in females. Over time, breed selection led to smaller head, higher stature, and shorter trunk length. However, important measures for the breed’s functionality, such as shoulder length and thoracic circumference, decreased.

  20. Lepton and quark generations in the geometrical Rishon model

    International Nuclear Information System (INIS)

    Elbaz, E.; Uschersohn, J.; Meyer, J.

    1981-12-01

    We propose a concrete representation of leptons and quarks in different generations in the geometrical approach to the rishon model where rishons behave as the fundamental representations of the SU(3)sub(C) x SU(3)sub(H) group. The model allows a unified description of both hadronic and leptonic decays of elementary particles

  1. Tentative purely geometrical Machian framework for describing gravity and inertia

    Energy Technology Data Exchange (ETDEWEB)

    Goldoni, R [Pisa Univ. (Italy). Ist. di Matematica

    1979-03-03

    The purely geometrical Machian approach to gravitation presented in this letter improves an already published one. In any non vacuum cosmos the gravitational equations in gravitational units are identical to Einstein's equations, while the equations describing the gravitational field in local atomic units are integrodifferential equations in agreement with the available experimental data.

  2. Further results on geometric operators in quantum gravity

    NARCIS (Netherlands)

    Loll, R.

    1996-01-01

    We investigate some properties of geometric operators in canonical quantum gravity in the connection approach `a la Ashtekar, which are associated with volume, area and length of spatial regions. We motivate the construction of analogous discretized lattice quantities, compute various quantum

  3. Advanced Geometric Optics on a Programmable Pocket Calculator.

    Science.gov (United States)

    Nussbaum, Allen

    1979-01-01

    Presents a ray-tracing procedure based on some ideas of Herzberger and the matrix approach to geometrical optics. This method, which can be implemented on a programmable pocket calculator, applies to any conic surface, including paraboloids, spheres, and planes. (Author/GA)

  4. Geometrically Induced Interactions and Bifurcations

    Science.gov (United States)

    Binder, Bernd

    2010-01-01

    In order to evaluate the proper boundary conditions in spin dynamics eventually leading to the emergence of natural and artificial solitons providing for strong interactions and potentials with monopole charges, the paper outlines a new concept referring to a curvature-invariant formalism, where superintegrability is given by a special isometric condition. Instead of referring to the spin operators and Casimir/Euler invariants as the generator of rotations, a curvature-invariant description is introduced utilizing a double Gudermann mapping function (generator of sine Gordon solitons and Mercator projection) cross-relating two angular variables, where geometric phases and rotations arise between surfaces of different curvature. Applying this stereographic projection to a superintegrable Hamiltonian can directly map linear oscillators to Kepler/Coulomb potentials and/or monopoles with Pöschl-Teller potentials and vice versa. In this sense a large scale Kepler/Coulomb (gravitational, electro-magnetic) wave dynamics with a hyperbolic metric could be mapped as a geodesic vertex flow to a local oscillator singularity (Dirac monopole) with spherical metrics and vice versa. Attracting fixed points and dynamic constraints are given by special isometries with magic precession angles. The nonlinear angular encoding directly provides for a Shannon mutual information entropy measure of the geodesic phase space flow. The emerging monopole patterns show relations to spiral Fresnel holography and Berry/Aharonov-Bohm geometric phases subject to bifurcation instabilities and singularities from phase ambiguities due to a local (entropy) overload. Neutral solitons and virtual patterns emerging and mediating in the overlap region between charged or twisted holographic patterns are visualized and directly assigned to the Berry geometric phase revealing the role of photons, neutrons, and neutrinos binding repulsive charges in Coulomb, strong and weak interaction.

  5. Assessment of the relationships between morphometric characteristics of relief with quantitative and qualitative characteristics of forests using ASTER and SRTM digital terrain models

    OpenAIRE

    D. M. Chernikhovsky

    2017-01-01

    In the article are shown results of assessment of relationships between quantitative and qualitative characteristics of forests and morphometric characteristics of relief on an example model plot in Nanayskoe forest district of Khabarovsk Territory. The relevance of the investigation is connected with need for improvement of the system of forest evaluation operations in the Russian Federation, including with use of the landscape approach. The tasks of the investigation were assessment of rela...

  6. Moving walls and geometric phases

    Energy Technology Data Exchange (ETDEWEB)

    Facchi, Paolo, E-mail: paolo.facchi@ba.infn.it [Dipartimento di Fisica and MECENAS, Università di Bari, I-70126 Bari (Italy); INFN, Sezione di Bari, I-70126 Bari (Italy); Garnero, Giancarlo, E-mail: giancarlo.garnero@uniba.it [Dipartimento di Fisica and MECENAS, Università di Bari, I-70126 Bari (Italy); INFN, Sezione di Bari, I-70126 Bari (Italy); Marmo, Giuseppe [Dipartimento di Scienze Fisiche and MECENAS, Università di Napoli “Federico II”, I-80126 Napoli (Italy); INFN, Sezione di Napoli, I-80126 Napoli (Italy); Samuel, Joseph [Raman Research Institute, 560080 Bangalore (India)

    2016-09-15

    We unveil the existence of a non-trivial Berry phase associated to the dynamics of a quantum particle in a one dimensional box with moving walls. It is shown that a suitable choice of boundary conditions has to be made in order to preserve unitarity. For these boundary conditions we compute explicitly the geometric phase two-form on the parameter space. The unboundedness of the Hamiltonian describing the system leads to a natural prescription of renormalization for divergent contributions arising from the boundary.

  7. Geometric Topology and Shape Theory

    CERN Document Server

    Segal, Jack

    1987-01-01

    The aim of this international conference the third of its type was to survey recent developments in Geometric Topology and Shape Theory with an emphasis on their interaction. The volume contains original research papers and carefully selected survey of currently active areas. The main topics and themes represented by the papers of this volume include decomposition theory, cell-like mappings and CE-equivalent compacta, covering dimension versus cohomological dimension, ANR's and LCn-compacta, homology manifolds, embeddings of continua into manifolds, complement theorems in shape theory, approximate fibrations and shape fibrations, fibered shape, exact homologies and strong shape theory.

  8. Geometric Rationalization for Freeform Architecture

    KAUST Repository

    Jiang, Caigui

    2016-06-20

    The emergence of freeform architecture provides interesting geometric challenges with regards to the design and manufacturing of large-scale structures. To design these architectural structures, we have to consider two types of constraints. First, aesthetic constraints are important because the buildings have to be visually impressive. Sec- ond, functional constraints are important for the performance of a building and its e cient construction. This thesis contributes to the area of architectural geometry. Specifically, we are interested in the geometric rationalization of freeform architec- ture with the goal of combining aesthetic and functional constraints and construction requirements. Aesthetic requirements typically come from designers and architects. To obtain visually pleasing structures, they favor smoothness of the building shape, but also smoothness of the visible patterns on the surface. Functional requirements typically come from the engineers involved in the construction process. For exam- ple, covering freeform structures using planar panels is much cheaper than using non-planar ones. Further, constructed buildings have to be stable and should not collapse. In this thesis, we explore the geometric rationalization of freeform archi- tecture using four specific example problems inspired by real life applications. We achieve our results by developing optimization algorithms and a theoretical study of the underlying geometrical structure of the problems. The four example problems are the following: (1) The design of shading and lighting systems which are torsion-free structures with planar beams based on quad meshes. They satisfy the functionality requirements of preventing light from going inside a building as shad- ing systems or reflecting light into a building as lighting systems. (2) The Design of freeform honeycomb structures that are constructed based on hex-dominant meshes with a planar beam mounted along each edge. The beams intersect without

  9. Field guide to geometrical optics

    CERN Document Server

    Greivenkamp, John E

    2004-01-01

    This Field Guide derives from the treatment of geometrical optics that has evolved from both the undergraduate and graduate programs at the Optical Sciences Center at the University of Arizona. The development is both rigorous and complete, and it features a consistent notation and sign convention. This volume covers Gaussian imagery, paraxial optics, first-order optical system design, system examples, illumination, chromatic effects, and an introduction to aberrations. The appendices provide supplemental material on radiometry and photometry, the human eye, and several other topics.

  10. Geometric phase from dielectric matrix

    International Nuclear Information System (INIS)

    Banerjee, D.

    2005-10-01

    The dielectric property of the anisotropic optical medium is found by considering the polarized photon as two component spinor of spherical harmonics. The Geometric Phase of a polarized photon has been evaluated in two ways: the phase two-form of the dielectric matrix through a twist and the Pancharatnam phase (GP) by changing the angular momentum of the incident polarized photon over a closed triangular path on the extended Poincare sphere. The helicity in connection with the spin angular momentum of the chiral photon plays the key role in developing these phase holonomies. (author)

  11. A history of geometrical methods

    CERN Document Server

    Coolidge, Julian Lowell

    2013-01-01

    Full and authoritative, this history of the techniques for dealing with geometric questions begins with synthetic geometry and its origins in Babylonian and Egyptian mathematics; reviews the contributions of China, Japan, India, and Greece; and discusses the non-Euclidean geometries. Subsequent sections cover algebraic geometry, starting with the precursors and advancing to the great awakening with Descartes; and differential geometry, from the early work of Huygens and Newton to projective and absolute differential geometry. The author's emphasis on proofs and notations, his comparisons betwe

  12. Geometrical optics and optimal transport.

    Science.gov (United States)

    Rubinstein, Jacob; Wolansky, Gershon

    2017-10-01

    The Fermat principle is generalized to a system of rays. It is shown that all the ray mappings that are compatible with two given intensities of a monochromatic wave, measured at two planes, are stationary points of a canonical functional, which is the weighted average of the actions of all the rays. It is further shown that there exist at least two stationary points for this functional, implying that in the geometrical optics regime the phase from intensity problem has inherently more than one solution. The caustic structures of all the possible ray mappings are analyzed. A number of simulations illustrate the theoretical considerations.

  13. Does skull morphology constrain bone ornamentation? A morphometric analysis in the Crocodylia.

    Science.gov (United States)

    Clarac, F; Souter, T; Cubo, J; de Buffrénil, V; Brochu, C; Cornette, R

    2016-08-01

    Previous quantitative assessments of the crocodylians' dermal bone ornamentation (this ornamentation consists of pits and ridges) has shown that bone sculpture results in a gain in area that differs between anatomical regions: it tends to be higher on the skull table than on the snout. Therefore, a comparative phylogenetic analysis within 17 adult crocodylian specimens representative of the morphological diversity of the 24 extant species has been performed, in order to test if the gain in area due to ornamentation depends on the skull morphology, i.e. shape and size. Quantitative assessment of skull size and shape through geometric morphometrics, and of skull ornamentation through surface analyses, produced a dataset that was analyzed using phylogenetic least-squares regression. The analyses reveal that none of the variables that quantify ornamentation, be they on the snout or the skull table, is correlated with the size of the specimens. Conversely, there is more disparity in the relationships between skull conformations (longirostrine vs. brevirostrine) and ornamentation. Indeed, both parameters GApit (i.e. pit depth and shape) and OArelat (i.e. relative area of the pit set) are negatively correlated with snout elongation, whereas none of the values quantifying ornamentation on the skull table is correlated with skull conformation. It can be concluded that bone sculpture on the snout is influenced by different developmental constrains than on the skull table and is sensible to differences in the local growth 'context' (allometric processes) prevailing in distinct skull parts. Whatever the functional role of bone ornamentation on the skull, if any, it seems to be restricted to some anatomical regions at least for the longirostrine forms that tend to lose ornamentation on the snout. © 2016 Anatomical Society.

  14. Renormgroup symmetries in problems of nonlinear geometrical optics

    International Nuclear Information System (INIS)

    Kovalev, V.F.

    1996-01-01

    Utilization and further development of the previously announced approach [1,2] enables one to construct renormgroup symmetries for a boundary value problem for the system of equations which describes propagation of a powerful radiation in a nonlinear medium in geometrical optics approximation. With the help of renormgroup symmetries new rigorous and approximate analytical solutions of nonlinear geometrical optics equations are obtained. Explicit analytical expressions are presented that characterize spatial evolution of laser beam which has an arbitrary intensity dependence at the boundary of the nonlinear medium. (author)

  15. Geometric Properties of Grassmannian Frames for and

    Directory of Open Access Journals (Sweden)

    Benedetto John J

    2006-01-01

    Full Text Available Grassmannian frames are frames satisfying a min-max correlation criterion. We translate a geometrically intuitive approach for two- and three-dimensional Euclidean space ( and into a new analytic method which is used to classify many Grassmannian frames in this setting. The method and associated algorithm decrease the maximum frame correlation, and hence give rise to the construction of specific examples of Grassmannian frames. Many of the results are known by other techniques, and even more generally, so that this paper can be viewed as tutorial. However, our analytic method is presented with the goal of developing it to address unresovled problems in -dimensional Hilbert spaces which serve as a setting for spherical codes, erasure channel modeling, and other aspects of communications theory.

  16. Robust topology optimization accounting for geometric imperfections

    DEFF Research Database (Denmark)

    Schevenels, M.; Jansen, M.; Lombaert, Geert

    2013-01-01

    performance. As a consequence, the actual structure may be far from optimal. In this paper, a robust approach to topology optimization is presented, taking into account two types of geometric imperfections: variations of (1) the crosssections and (2) the locations of structural elements. The first type...... is modeled by means of a scalar non-Gaussian random field, which is represented as a translation process. The underlying Gaussian field is simulated by means of the EOLE method. The second type of imperfections is modeled as a Gaussian vector-valued random field, which is simulated directly by means...... of the EOLE method. In each iteration of the optimization process, the relevant statistics of the structural response are evaluated by means of a Monte Carlo simulation. The proposed methodology is successfully applied to a test problem involving the design of a compliant mechanism (for the first type...

  17. Geometric regularizations and dual conifold transitions

    International Nuclear Information System (INIS)

    Landsteiner, Karl; Lazaroiu, Calin I.

    2003-01-01

    We consider a geometric regularization for the class of conifold transitions relating D-brane systems on noncompact Calabi-Yau spaces to certain flux backgrounds. This regularization respects the SL(2,Z) invariance of the flux superpotential, and allows for computation of the relevant periods through the method of Picard-Fuchs equations. The regularized geometry is a noncompact Calabi-Yau which can be viewed as a monodromic fibration, with the nontrivial monodromy being induced by the regulator. It reduces to the original, non-monodromic background when the regulator is removed. Using this regularization, we discuss the simple case of the local conifold, and show how the relevant field-theoretic information can be extracted in this approach. (author)

  18. The differential-geometric aspects of integrable dynamical systems

    International Nuclear Information System (INIS)

    Prykarpatsky, Y.A.; Samoilenko, A.M.; Prykarpatsky, A.K.; Bogolubov, N.N. Jr.; Blackmore, D.L.

    2007-05-01

    The canonical reduction method on canonically symplectic manifolds is analyzed in detail, and the relationships with the geometric properties of associated principal fiber bundles endowed with connection structures are described. Some results devoted to studying geometrical properties of nonabelian Yang-Mills type gauge field equations are presented. A symplectic theory approach is developed for partially solving the problem of algebraic-analytical construction of integral submanifold embeddings for integrable (via the abelian and nonabelian Liouville-Arnold theorems) Hamiltonian systems on canonically symplectic phase spaces. The fundamental role of the so-called Picard-Fuchs type equations is revealed, and their differential-geometric and algebraic properties are studied in detail. Some interesting examples of integrable Hamiltonian systems are are studied in detail in order to demonstrate the ease of implementation and effectiveness of the procedure for investigating the integral submanifold embedding mapping. (author)

  19. On a multiorbit geometrical action for the integrable systems

    International Nuclear Information System (INIS)

    Gorsky, A.S.; Olshanetsky, M.A.; Selivanov, K.G.

    1990-10-01

    The Lagrangian approach to the two dimensional integrable systems (IS) is discussed. The Lagrangians proposed have the form of the interacting geometrical actions for the Kac-Moody and Virasoro groups. In one approach when the first principle is the gauge invariance of the action the scale symmetry is broken by introducing the nontrivial representatives (monodromies) for each orbit. We also have discussed the Lagrangians with the broken gauge symmetry but without the bare massive parameters. (author). 22 refs

  20. Multiscale geometric modeling of macromolecules I: Cartesian representation

    Science.gov (United States)

    Xia, Kelin; Feng, Xin; Chen, Zhan; Tong, Yiying; Wei, Guo-Wei

    2014-01-01

    This paper focuses on the geometric modeling and computational algorithm development of biomolecular structures from two data sources: Protein Data Bank (PDB) and Electron Microscopy Data Bank (EMDB) in the Eulerian (or Cartesian) representation. Molecular surface (MS) contains non-smooth geometric singularities, such as cusps, tips and self-intersecting facets, which often lead to computational instabilities in molecular simulations, and violate the physical principle of surface free energy minimization. Variational multiscale surface definitions are proposed based on geometric flows and solvation analysis of biomolecular systems. Our approach leads to geometric and potential driven Laplace-Beltrami flows for biomolecular surface evolution and formation. The resulting surfaces are free of geometric singularities and minimize the total free energy of the biomolecular system. High order partial differential equation (PDE)-based nonlinear filters are employed for EMDB data processing. We show the efficacy of this approach in feature-preserving noise reduction. After the construction of protein multiresolution surfaces, we explore the analysis and characterization of surface morphology by using a variety of curvature definitions. Apart from the classical Gaussian curvature and mean curvature, maximum curvature, minimum curvature, shape index, and curvedness are also applied to macromolecular surface analysis for the first time. Our curvature analysis is uniquely coupled to the analysis of electrostatic surface potential, which is a by-product of our variational multiscale solvation models. As an expository investigation, we particularly emphasize the numerical algorithms and computational protocols for practical applications of the above multiscale geometric models. Such information may otherwise be scattered over the vast literature on this topic. Based on the curvature and electrostatic analysis from our multiresolution surfaces, we introduce a new concept, the