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Sample records for genus microtus rodentia

  1. Molecular phylogeny of the speciose vole genus Microtus (Arvicolinae, Rodentia) inferred from mitochondrialDNA sequences

    Czech Academy of Sciences Publication Activity Database

    Jaarola, M.; Martínková, Natália; Gündüz, I.; Brunhoff, C.; Zima, Jan; Nadachowski, A.; Amori, G.; Bulatova, N. S.; Chondropoulos, B.; Fraguedakis-Tsolis, S.; González-Esteban, J.; López-Fuster, M. J.; Kandaurov, A. S.; Kefelioglu, H.; Luz Mathias, M.; Villate, I.; Searle, J. B.

    2004-01-01

    Roč. 33, č. 3 (2004), s. 647-663 ISSN 1055-7903 R&D Projects: GA ČR GA206/01/0562 Institutional research plan: CEZ:AV0Z6093917 Keywords : Microtus * mitochondrial DNA * phylogeny Subject RIV: EB - Genetics ; Molecular Biology Impact factor: 4.213, year: 2004

  2. On subspecific taxonomy of Microtus savii (Rodentia, Arvicolidae

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    Longino Contoli

    2003-10-01

    Full Text Available Riassunto Sulla tassonomia sottospecifica di Microtus savii (Rodentia, Arvicolidae Viene riveduta e riassunta la situazione tassonomica sottospecifica di Microtus (Terricola savii, anche tramite la descrizione di due nuovi taxa: Microtus (Terricola savii tolfetanus, dei Monti della Tolfa e Microtus (Terricola savii niethammericus, del Gargano.

  3. Reservoir competence of Microtus pennsylvanicus (Rodentia: Cricetidae) for the Lyme disease spirochete, Borrelia burgdorferi

    Science.gov (United States)

    Markowski, D.; Ginsberg, H.S.; Hyland, K.E.; Hu, R.

    1998-01-01

    The reservoir competence of the meadow vole, Microtus pennsylvanicus Ord, for the Lyme disease spirochete, Borrelia burgdorferi Johnson, Schmid, Hyde, Steigerwalt & Brenner was established on Patience Island, RI. Meadow voles were collected from 5 locations throughout Rhode Island. At 4 of the field sites, M. pennsylvanicus represented only 4.0% (n = 141) of the animals captured. However, on Patience Island, M. pennsylvanicus was the sole small mammal collected (n = 48). Of the larval Ixodes scapularis Say obtained from the meadow voles on Patience Island, 62% (n = 78) was infected with B. burgdorferi. Meadow voles from all 5 locations were successfully infected with B. burgdorferi in the laboratory and were capable of passing the infection to xenodiagnostic I. scapularis larvae for 9 wk. We concluded that M. pennsylvanicus was physiologically capable of maintaining B. burgdorferi infection. However, in locations where Peromyscus leucopus (Rafinesque) is abundant, the role of M. pennsylvanicus as a primary reservoir for B. burgdorferi was reduced.

  4. Late Cenozoic History of the Genus Micromys (Mammalia, Rodentia) in Central Europe

    Czech Academy of Sciences Publication Activity Database

    Horáček, I.; Knitlová, M.; Wagner, Jan; Kordos, L.; Nadachowski, A.

    2013-01-01

    Roč. 8, č. 5 (2013), e62498 E-ISSN 1932-6203 R&D Projects: GA ČR GA205/09/0184 Institutional support: RVO:67985831 Keywords : Mammalia * Rodentia * Genus Micromys * Late Cenozoic Subject RIV: DB - Geology ; Mineralogy Impact factor: 3.534, year: 2013

  5. Phylogenetic relationships in the genus Aethomys (Rodentia: Muridae)

    African Journals Online (AJOL)

    These results are relatively concordant with recent molecular studies based on microcomplement fixation of albumin, mitochondrial DNA cytochrome b and 16S rRNA data, which collectively suggest that the genus Aethomys is paraphyletic. Possible paraphyly is also reflected by a relatively low bootstrap value at the node ...

  6. First report of partial albinism in genus Thrichomys (Rodentia: Echimyidae

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    Antonio Carlos da S.A. Neves

    2014-01-01

    Full Text Available Reports about albinism in rodents are common. In the family Echimyidae, however, albinism is very rare. This is the second case of coat color variation reported within Echimyidae and the first for the genus Thrichomys. The pelages of Thrichomys pachyurus individuals with normal and variant coat color were observed under a fluorescent artificial light and were examined with a stereoscopic microscope. The descriptions of pelage color were based on the book "Color Standards and Color Nomenclature". The predominantly white pattern of coat color in individuals of T. pachyurus suggests a partial albinism caused by delay in migration time of melanoblasts from neural crest to epidermis. The habitat of T. pachyurus has a heavy vegetative cover, which offers natural protection against predators and high-quality nutrition.

  7. Microtus oeconomus (Rodentia), a useful mammal for studying the induction of sex-chromosome nondisjunction and diploid gametes in male germ cells

    Energy Technology Data Exchange (ETDEWEB)

    Tates, A.D.

    1979-08-01

    A method is described for the detection of sex-chromosome nondisjunction and diploid spermatids in male germ cells of the field vole Microtus oeconomus. The method is based on the unique distribution pattern of heterochromatin in Microtus cells, which makes it possible to identify X and Y chromosomes in early spermatids with a simple C-banding procedure. With the Microtus system it has now been demonstrated that radiation of spermatocyte stages with doses of 50, 100 and 200 R results in a higher frequency of sex chromosome nondisjunction and of diploid gametes. Both types of aberrant gametes can be produced during the first and second meiotic division.

  8. A new genus and two new species of chigger mites (Acari: Trombiculidae) from the Laotian rock-rat Laonastes aenigmamus Jenkins, Kilpatrick, Robinson & Timmins (Rodentia: Diatomyidae).

    Science.gov (United States)

    Stekolnikov, Alexandr A

    2014-01-01

    A new chigger mite genus Laotrombicula n. g. and two new species, Laotrombicula khunboromi n. sp. (type-species) and L. fangumi n. sp., are described from the Laotian rock-rat Laonastes aenigmamus Jenkins, Kilpatrick, Robinson & Timmins (Rodentia: Diatomyidae). The new genus is most similar to Trombiculindus Radford, 1948 and Leptotrombidium Nagayo, Miyagawa, Mitamura & Imamura, 1916 and differs from these genera by having the scutum of subhexagonal or semicircular shape vs widely rectangular; pinnatifid dorsocentral idiosomal setae vs foliaceous in Trombiculindus and unexpanded in Leptotrombidium; and by the presence of serrated longitudinal crests in the middle part of scutum.

  9. New species and new records of mites of the genus Stigmaeus(Acari: Prostigmata: Stigmaeidae) from Crimea.

    Science.gov (United States)

    Khaustov, Alexander A

    2014-05-06

    Three new species of the genus Stigmaeus Koch, 1836 (Acari: Stigmaeidae) are described from various habitats in Crimea: Stigmaeus kuznetsovi sp. nov. from nests of Microtus socialis (Rodentia: Cricetidae); S. mitrofanovi sp. nov. from galleries of Pityogenes bistridentatus (Coleoptera: Curculionidae) under the bark of Pinus pallasiana, and S. silvestris sp. nov. from rotten log of Pinus pallasiana. Stigmaeus corticeus Kuznetsov and Wainstein, 1977 and S. maraghehiensis Bagheri and Ueckermann, 2012 are recorded for the first time in Crimea. A key to species of the genus Stigmaeus of Crimea is provided.

  10. Allozyme variation and systematics of the genus apodemus (Rodentia:Muridae) in Asia minor and Iran

    Czech Academy of Sciences Publication Activity Database

    Macholán, Miloš; Filippucci, M. G.; Benda, P.; Frynta, D.; Sádlová, J.

    2001-01-01

    Roč. 82, č. 3 (2001), s. 799-813 ISSN 0022-2372 R&D Projects: GA ČR GA206/93/0531; GA MŠk VS97102; GA AV ČR KSK6005114 Keywords : genus apodemus Subject RIV: EB - Genetics ; Molecular Biology Impact factor: 1.735, year: 2001

  11. Are ribosomal DNA clusters rearrangement hotspots? A case study in the genus Mus (Rodentia, Muridae

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    Douzery Emmanuel JP

    2011-05-01

    Full Text Available Abstract Background Recent advances in comparative genomics have considerably improved our knowledge of the evolution of mammalian karyotype architecture. One of the breakthroughs was the preferential localization of evolutionary breakpoints in regions enriched in repetitive sequences (segmental duplications, telomeres and centromeres. In this context, we investigated the contribution of ribosomal genes to genome reshuffling since they are generally located in pericentromeric or subtelomeric regions, and form repeat clusters on different chromosomes. The target model was the genus Mus which exhibits a high rate of karyotypic change, a large fraction of which involves centromeres. Results The chromosomal distribution of rDNA clusters was determined by in situ hybridization of mouse probes in 19 species. Using a molecular-based reference tree, the phylogenetic distribution of clusters within the genus was reconstructed, and the temporal association between rDNA clusters, breakpoints and centromeres was tested by maximum likelihood analyses. Our results highlighted the following features of rDNA cluster dynamics in the genus Mus: i rDNA clusters showed extensive diversity in number between species and an almost exclusive pericentromeric location, ii a strong association between rDNA sites and centromeres was retrieved which may be related to their shared constraint of concerted evolution, iii 24% of the observed breakpoints mapped near an rDNA cluster, and iv a substantial rate of rDNA cluster change (insertion, deletion also occurred in the absence of chromosomal rearrangements. Conclusions This study on the dynamics of rDNA clusters within the genus Mus has revealed a strong evolutionary relationship between rDNA clusters and centromeres. Both of these genomic structures coincide with breakpoints in the genus Mus, suggesting that the accumulation of a large number of repeats in the centromeric region may contribute to the high level of chromosome

  12. Genetic diversity and relatedness within and between species of the genus Oligoryzomys (Rodentia; Sigmodontinae).

    Science.gov (United States)

    Trott, A; Callegari-Jacques, S M; Oliveira, L F B; Langguth, A; Mattevi, M S

    2007-02-01

    A RAPD analysis on six species of the rodent genus Oligoryzomys trapped in a wide area (ranging from 01 degrees N to 32 degrees S) of Brazilian territory was performed in order to determine the levels of genetic variability within and between its populations and species. One-hundred and ninety-three animals were collected in 13 different sites (corresponding to 17 samples) located at Pampas, Atlantic Rain Forest, Cerrado, and Amazon domains. Oligoryzomys sp., O. nigripes (8 populations), O. flavescens (4 populations), O. moojeni, O. stramineus, and O. fornesi were the taxa analyzed. Of the 20 primers tested, 4 generated a total of 75 polymorphic products simultaneously amplified in 151 specimens. Various diversity estimators analyzed showed considerable differences between species and populations, indicating a great genetic variation occurring in the Oligoryzomys taxa investigated. A cluster analysis was made using Nei's standard genetic distances, however, it did not correlate the genetic heterogeneity of the species and populations with the geographical areas.

  13. Nine karyomorphs for spiny rats of the genus Proechimys (Echimyidae, Rodentia from North and Central Brazil

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    Taís Machado

    2005-12-01

    Full Text Available Spiny rats of the genus Proechimys are morphologically diverse, widely distributed and have diploid numbers ranging from 2n = 14-16 to 2n = 62. In this paper we present cytogenetical data and brief comments on morphological and biogeographical issues related to spiny rats. In our sample of 42 spiny rats collected from 12 Brazilian Amazonian tropical rainforest and the Cerrado (Brazilian savanna sites we detected nine karyological entities: four different karyomorphs with 2n = 30, three with 2n = 28, one with 2n = 15 and one with 2n = 44. Based on qualitative morphological characters these karyomorphs can be allocated to five species within the goeldii, guyannensis and longicaudatus species groups.

  14. Genetic diversity and relatedness within and between species of the genus Oligoryzomys (Rodentia; Sigmodontinae

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    A. Trott

    Full Text Available A RAPD analysis on six species of the rodent genus Oligoryzomys trapped in a wide area (ranging from 01° N to 32° S of Brazilian territory was performed in order to determine the levels of genetic variability within and between its populations and species. One-hundred and ninety-three animals were collected in 13 different sites (corresponding to 17 samples located at Pampas, Atlantic Rain Forest, Cerrado, and Amazon domains. Oligoryzomys sp., O. nigripes (8 populations, O. flavescens (4 populations, O. moojeni, O. stramineus, and O. fornesi were the taxa analyzed. Of the 20 primers tested, 4 generated a total of 75 polymorphic products simultaneously amplified in 151 specimens. Various diversity estimators analyzed showed considerable differences between species and populations, indicating a great genetic variation occurring in the Oligoryzomys taxa investigated. A cluster analysis was made using Nei's standard genetic distances, however, it did not correlate the genetic heterogeneity of the species and populations with the geographical areas.

  15. Taxonomic hypotheses regarding the genus Gerbillus (Rodentia, Muridae, Gerbillinae) based on molecular analyses of museum specimens

    Science.gov (United States)

    Ndiaye, Arame; Tatard, Caroline; Stanley, William; Granjon, Laurent

    2016-01-01

    Abstract Methodological improvements now allow routine analyses of highly degraded DNA samples as found in museum specimens. Using these methods could be useful in studying such groups as rodents of the genus Gerbillus for which i) the taxonomy is still highly debated, ii) collection of fresh specimens may prove difficult. Here we address precise taxonomic questions using a small portion of the cytochrome b gene obtained from 45 dry skin/skull museum samples (from 1913 to 1974) originating from two African and three Asian countries. The specimens were labelled Gerbillus gerbillus, Gerbillus andersoni, Gerbillus nanus, Gerbillus amoenus, Gerbillus perpallidus and Gerbillus pyramidum, and molecular results mostly confirmed these assignations. The close relationship between Gerbillus nanus (Asian origin) and Gerbillus amoenus (African origin) confirmed that they represent vicariant sibling species which differentiated in allopatry on either side of the Red Sea. In the closely related Gerbillus perpallidus and Gerbillus pyramidum, specimens considered as belonging to one Gerbillus pyramidum subspecies (Gerbillus pyramidum floweri) appeared closer to Gerbillus perpallidus suggesting that they (Gerbillus pyramidum floweri and Gerbillus perpallidus) may represent a unique species, distributed on both sides of the Nile River, for which the correct name should be Gerbillus floweri. Furthermore, the three other Gerbillus pyramidum subspecies grouped together with no apparent genetic structure suggesting that they may not yet represent genetically differentiated lineages. This study confirms the importance of using these methods on museum samples, which can open new perspectives in this particular group as well as in other groups of interest. PMID:27047247

  16. A new karyotype for the genus Cavia from a southern island of Brazil (Rodentia - Caviidae

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    A. Gava

    1998-03-01

    Full Text Available Intraspecific karyotype variation in mammal species is very common and often caused by centromeric fusion of acrocentric chromosomes. We describe here a new karyotype 2n = 62 (FN = 112 for the genus Cavia from the Moleques do Sul Islands, of the southern coast of Brazil. We analyzed two male and four female karyotypes that had twenty-four biarmed pairs and six pairs of acrocentric chromosomes. The sexual pair consisted of a metacentric X-chromosome and a large acrocentric Y. C-bands were found in the centromeric and pericentromeric regions of almost all chromosomes, except for some small biarmed and acrocentric ones. Nucleolus organizer regions appeared in two biarmed chromosomes, and G-banding patterns were also seen.RESUMO A variação cariotípica nas espécies de mamíferos é bastante comum e geralmente causada pela fusão de cromossomos acrocêntricos. Foi descrito neste trabalho um novo cariótipo, com 2n = 62 e FN = 112, para o gênero Cavia proveniente das ilhas Moleques do Sul, da costa sul do Brasil. Foram analisados os cariótipos de dois machos e quatro fêmeas que possuiam 24 pares de cromossomos com dois braços e seis pares de acrocêntricos. O par sexual era constituído por um cromossomo X metacêntrico grande e um Y acrocêntrico. As bandas C estavam localizadas nas regiões centroméricas e pericentroméricas da maioria dos cromossomos, com exceção de alguns acrocêntricos e os cromossomos de dois braços menores. As regiões organizadoras de nucléolo ocorreram em dois cromossomos com dois braços e o padrão de bandamento G foi também apresentado.

  17. Multilocus phylogenetics of a rapid radiation in the genus Thomomys (Rodentia: Geomyidae).

    Science.gov (United States)

    Belfiore, Natalia M; Liu, Liang; Moritz, Craig

    2008-04-01

    Species complexes undergoing rapid radiation present a challenge in molecular systematics because of the possibility that ancestral polymorphism is retained in component gene trees. Coalescent theory has demonstrated that gene trees often fail to match lineage trees when taxon divergence times are less than the ancestral effective population sizes. Suggestions to increase the number of loci and the number of individuals per taxon have been proposed; however, phylogenetic methods to adequately analyze these data in a coalescent framework are scarce. We compare two approaches to estimating lineage (species) trees using multiple individuals and multiple loci: the commonly used partitioned Bayesian analysis of concatenated sequences and a modification of a newly developed hierarchical Bayesian method (BEST) that simultaneously estimates gene trees and species trees from multilocus data. We test these approaches on a phylogeny of rapidly radiating species wherein divergence times are likely to be smaller than effective population sizes, and incomplete lineage sorting is known, in the rodent genus, Thomomys. We use seven independent noncoding nuclear sequence loci (total approximately 4300 bp) and between 1 and 12 individuals per taxon to construct a phylogenetic hypothesis for eight Thomomys species. The majority-rule consensus tree from the partitioned concatenated analysis included 14 strongly supported bipartitions, corroborating monophyletic species status of five of the eight named species. The BEST tree strongly supported only the split between the two subgenera and showed very low support for any other clade. Comparison of both lineage trees to individual gene trees revealed that the concatenation method appears to ignore conflicting signals among gene trees, whereas the BEST tree considers conflicting signals and downweights support for those nodes. Bayes factor analysis of posterior tree distributions from both analyses strongly favor the model underlying the

  18. Karyotypic analysis in species of the genus Dasyprocta (Rodentia: Dasyproctidae found in Brazilian Amazon

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    ROSEMAR S. L. RAMOS

    2003-03-01

    Full Text Available A total of 30 animals of the genus Dasyprocta were cytogenetically studied. They belong to the following species: D. prymnolopha (N=20, D. leporina (N=6, D. fuliginosa (N=1 and Dasyprocta sp. (N=3 (Dasyproctidae, Hystricognathi. Cell suspensions were obtained by peripheral blood culture, besides bone marrow and spleen cells, from D. prymnolopha and D. leporina. The diploid number was 64/65 for all samples. The karyotypes showed similarity, and chromosomal polymorphism was not detected by Giemsa conventional staining and G banding. The constitutive heterochromatin distribution at the pericentromeric region of all the chromosomes was similar in all species. D. prymnolopha, D. leporina and Dasyprocta sp. presented variation in the heterochromatical block size at one of the homologues of the A18 pair. D. fuliginosa presented the heterochromatin uniformly distributed in all chromosomes. There was not variation in the NORs pattern in the species studied.Foram estudados citogeneticamente um total de 30 animais das espécies D. prymnolopha (N=20, D. leporina (N=6, D. fuliginosa (N=1 e Dasyprocta sp. (N=3 (Dasyproctidae, Histricognathi. As preparações cromossômicas foram obtidas do cultivo de sangue periférico, além de medula óssea e baço em D. prymnolopha e D. leporina. O número diplóide foi de 64/65 em todos os exemplares. O cariótipo mostrou similaridade, não sendo detectado, através de coloração convencional de giemsa e de banda G, polimorfismo cromossômico em qualquer uma das espécies estudadas. A distribuição da heterocromatina constitutiva na região pericentromérica de todos os cromossomos foi similar nas quatro espécies. D. prymnolopha, D. leporina e Dasyprocta sp. apresentaram variação no tamanho do bloco heterocromático em um dos homólogos do par A18. D. fuliginosa apresentou a heterocromatina uniformemente distribuída em todos os cromossomos. Não houve variação no padrão das RONs entre as esp��cies estudadas.

  19. Sigmodontinae, Rodentia

    Indian Academy of Sciences (India)

    Wagner) and O. mamorae (Thomas). Am. Mus. Novit. 3661, 1–32. Catzeflis F. and Tilak M. 2009 Molecular systematic of Neotropi- cal spiny mice (Neacomys: Sigmodontinae, Rodentia) from the. Guianan Region. Mammalia 73, 239–247.

  20. Rodentia: Sciuridae

    African Journals Online (AJOL)

    Close chromosomal congruence in two species of ground squirrel: Xerus inauris and X. princeps. (Rodentia: Sciuridae). T.J. Robinson, • .1.0. Skinner and A.S. Haim. Mammal Research Institute, University of Pretoria, Pretoria. Chromosomes from cultured fibroblasts of two southern. African ground squirrel species, Xerus ina ...

  1. Morphological diagnosis and geographic distribution of Atlantic Forest red-rumped mice of the genus Juliomys (Rodentia: Sigmodontinae)

    OpenAIRE

    Pavan,Silvia E; Leite,Yuri L. R

    2011-01-01

    Recognition and identification of red-rumped mice of the genus Juliomys González, 2000 has been a problem among many mammalogists, and specimens of this genus are commonly confused with other Atlantic Forest sigmodontine rodents. Herein we provide an expanded diagnosis for the genus based on the analyses of the three living species of Juliomys, and provide morphological comparisons to the small bodied and bright colored rodents Rhagomys rufescens (Thomas, 1886) and Oligoryzomys flavescens (Wa...

  2. A new genus of aplodontid rodent (Mammalia, Rodentia from the late Oligocene of northern Junggar Basin, China.

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    Shundong Bi

    Full Text Available A new genus and species of aplodontid rodent, Proansomys dureensis, from the late Oligocene of the northern Junggar Basin of China is described. The new genus is referred to as Ansomyinae because the ectoloph on the upper cheek teeth, although not fully crested, has attained the same characteristic bucket-handle-shaped configuration as other members of the subfamily. It represents the earliest record of the subfamily yet discovered in Asia and is more plesiomorphic than species of the genus Ansomys in having a partly crested ectoloph, a lower degree of lophodonty, and less complex tooth basins (lacking accessory lophules. Proansomys has transitional features between Prosciurus and Ansomys, suggesting that the Ansomyinae derived from a group of aplodontids related to Prosciurus, as did other advanced aplodontid rodents. This provides new light on the paleobiogeography of the Ansomyinae.

  3. Identification of three Iranian species of the genus Rattus (Rodentia, Muridae using a PCR-RFLP technique on mitochondrial DNA

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    safieh Akbary rad

    2009-11-01

    Full Text Available Abstract Three species of the genus Rattus Fisher, 1803 have been reported from Iran: the brown rat (R. norvegicus, the black rat (R. rattus and the Himalayan rat (R. pyctoris. The first two were introduced, whilst R. pyctoris is native and lives in mountainous regions from Pakistan to north-eastern Iran. In this study, the mitochondrial DNA from twenty six rats were analysed using a PCR-RFLP (Polymerase Chain Reaction - Restriction Fragments Length Polymorphism method to investigate inter-specific variation. Part of the 16S rRNA and cytochrome b genes were amplified and digested with three restriction enzymes: AluI, MboI and HinfI. Restriction fragments resulted in four different haplotypes and allowed to distinguish the three Rattus species. Our results suggest that the Himalayan rats are more closely related to R. rattus than to R. norvegicus and provide the basics for further phylogenetic studies. Riassunto Identificazione di tre specie iraniane del genere Rattus (Rodentia, Muridae tramite PCR-RFLP su DNA mitocondriale. Tre specie del genere Rattus risultano diffuse in Iran: il surmolotto (R. norvegicus, il ratto nero (R. rattus e il ratto himalayano (R. pyctoris. Le prime due specie sono state introdotte, mentre R. pyctoris è presente nelle aree montane che si sviluppano dal Pakistan all’Iran nordorientale. In questo studio, il DNA mitocondriale di 26 individui è stato analizzato tramite PCR-RFLP per evidenziare variazioni inter-specifiche. Parte dei geni del rRNA 16S e del citocromo b è stata amplificata e quindi sottoposta a digestione tramite tre diversi enzimi: AluI, MboI e HinfI. I frammenti di restrizione hanno permesso di individuare quattro aplotipi mitocondriali e di distinguere le tre specie. I risultati ottenuti suggeriscono che il ratto

  4. A new species of Cerradomys (Mammalia: Rodentia: Cricetidae from Central Brazil, with remarks on the taxonomy of the genus

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    Cibele R. Bonvicino

    2014-12-01

    Full Text Available Cerradomys is a Neotropical genus of cricetid rodents with seven recognized species, Cerradomys subflavus, C. maracajuensis, C. marinhus, C. scotti, C. langguthi, C. vivoi, and C. goytaca. Species of the genus are distributed throughout the open vegetation belt across South America, from northeastern and southeastern Atlantic coast of Brazil to eastern Paraguay and Western Bolivia. Here we describe a new species of Cerradomys from the state of Tocantins in Central Brazil, based on morphological, karyological and mitochondrial DNA analyses. This species is characterized by a medium body size and long tail, dense dorsal pelage, overall dorsal color gray olive lined with yellow, color of head and dorsum continuous, ventral body color slightly yellowish, skull with deep rostral depression, mesopterygoid fossa with long and wide sphenopalatine vacuities, presence of alisphenoid strut and of complex posterolateral palatal pits, and a unique chromosomal formula (2n = 60 and FNa = 74. Phylogenetic analyses based on cytochrome b sequences, including for the first time all known Cerradomys species, indicate that the new species is more closely related to C. scotti. The new species is found in sympatry with C. marinhus, while C. marinhus, C. scotti, and C. subflavus are found in sympatry (but not in syntopy in one locality in the state of Minas Gerais. Finally, analysis of cytochrome b sequences indicates that C. subflavus and C. goytaca are very closely related genetically and might be conspecific. Alternatively, these results can also be explained by incomplete lineage sorting due to a recent speciation event.

  5. Convergent evolution of aquatic foraging in a new genus and species (Rodentia: Muridae) from Sulawesi Island, Indonesia.

    Science.gov (United States)

    Rowe, Kevin C; Achmadi, Anang S; Esselstyn, Jacob A

    2014-06-17

    The island of Sulawesi, in Indonesia, lies at the crossroads of the Indo-Australian Archipelago and has remained isolated from the Asian (Sunda) and Australian (Sahul) continental shelves for at least the last 10 million years. Of the 50 native species of rodents on Sulawesi, all are endemic and represent the evolution of a variety of ecological and morphological forms within the Muridae and Sciuridae. Carnivorous rodents have evolved, perhaps independently, in Muridae from the Philippines, Sulawesi, and Sahul, but semi-aquatic murids are only known from Sahul. Here we describe a new genus and species of insectivorous water rat from Sulawesi. Phylogenetic analyses demonstrate that it is related to the shrew rats of Sulawesi and represents an origin of aquatic carnivory that is independent from the evolution of water rats on Sahul. Many areas of Sulawesi have not been surveyed systematically and current lists of mammal species are likely to dramatically underestimate actual diversity.

  6. Karyotype diversity suggests that Laonastes aenigmamus (Laotian rock rat) (Rodentia, Diatomyidae) is a multi-specific genus.

    Science.gov (United States)

    Richard, Florence; Gerbault-Seureau, Michèle; Douangboupha, Bounneuang; Keovichit, Kham; Hugot, Jean-Pierre; Dutrillaux, Bernard

    2016-09-01

    Laonastes aenigmamus (Khanyou) is a recently described rodent species living in geographically separated limestone formations of the Khammuan Province in Lao PDR. Chromosomes of 21 specimens of L. aenigmamus were studied using chromosome banding as well as fluorescent in situ hybridization (FISH) techniques using human painting, telomere repeats, and 28S rDNA probes. Four different karyotypes were established. Study with human chromosome paints and FISH revealed that four large chromosomes were formed by multiple common tandem fusions, with persistence of some interstitial telomeres. The rearrangements separating the different karyotypes (I to IV) were also reconstructed. Various combinations of Robertsonian translocations or tandem fusions involving the same chromosomes differentiate these karyotypes. These rearrangements create a strong gametic barrier, which isolates specimens with karyotype II from the others. C-banding and FISH with telomere repeats also exhibit large and systematized differences between karyotype II and others. These data indicate an ancient reproductive separation and suggest that Laonastes is not a mono-specific genus.

  7. Molecular genetic typing of three forms of wood and field mice belonging to a transpalearctic genus (Apodemus, Muridae, Rodentia)

    Energy Technology Data Exchange (ETDEWEB)

    Chelomina, G.N. [Institute of Biology and Soil Sciences, Vladivostok (Russian Federation); Lyapunova, E.A.; Vorontsov, N.N. [Kol`tsov Institute of Developmental Biology, Moscow (Russian Federation)] [and others

    1995-06-01

    The genomes of three species of wood mouse (Apodemus fulvipectus and A. ponticus from the Caucasus and A. argenteus from Japan) were compared by means of restriction analysis of nuclear DNA. The species are differentiated from each other and from previously studied species. Each species has its species-specific features. Within the genus Apodemus, A. ponticus is most closely related to the European species A. sylvaticus and A. flavicollis. A. fulvipectus has a peculiar type of restriction with EcoR I (specific for dispersed repeats) and Hind III (specific for satDNA). The genome of this species contains three families of EcoR I repeats previously found in various species (European and Asian) of wood mouse and Hind III components characteristic of both wood and field mice. A. argenteus differs from all other forms of Apodemus, the genome of which contains the 375-bp Hind III satellite, by the presence of an EcoR I satDNA fraction consisting of 240-bp repeating units. 22 refs., 2 figs.

  8. Late Miocene Sciuridae (Mammalia, Rodentia) from Anatolia, Turkey

    NARCIS (Netherlands)

    Bosma, A.A.; de Bruijn, H.; Wessels, W.

    Isolated cheek teeth of Sciuridae (Rodentia, Mammalia) from nine late Miocene localities in central Anatolia (Turkey) are described. The teeth represent at least 12 different species, five of which belong to the ground squirrel genus Tamias, two to the ground squirrel genus Spermophilinus, one to

  9. Population dynamics and spatial behaviour of Microtus tatricus (Arvicolinae, Rodentia)

    Czech Academy of Sciences Publication Activity Database

    Rudá, M.; Kocian, Ľ.; Martínková, Natália; Žiak, D.

    2010-01-01

    Roč. 55, č. 1 (2010), s. 85-88 ISSN 0001-7051 Institutional research plan: CEZ:AV0Z60930519 Keywords : Tatra vole * population dynamics * spatial activity Subject RIV: EH - Ecology, Behaviour Impact factor: 0.985, year: 2010

  10. natalensis (Muridae: Rodentia)

    African Journals Online (AJOL)

    2011-04-07

    Muridae: Rodentia) in a subtropical grassland in Swaziland. A. Monadjem* and M.R. Perrin. Department of Zoology and Entomology. University of Natal, Private Bag X01, Scottsville, 3209 South Africa. Ueceired 6 FehnlwT 1998; ...

  11. The micromammals (Lagomorpha, Eulipotyphla and Rodentia) from the Middle Pleistocene site of Cuesta de la Bajada (Teruel, Spain): Systematic study and paleoenvironmental considerations

    Energy Technology Data Exchange (ETDEWEB)

    Sese, C.; Soto, E.; Santonja, M.; Perez-Gonzalez, A.; Dominguez-Rodrigo, M.

    2016-07-01

    The micromammal association established in this work is the following: Lagomorpha: Oryctolagus cuniculus; Eulipotyphla: Crocidura cf. russula, cf. Sorex sp., Neomys sp., Soricidae indet. and Talpa sp.; and Rodentia: Eliomys quercinus, Apodemus cf. sylvaticus, Cricetulus (Allocricetus) bursae, Arvicola aff. sapidus, Microtus (Iberomys) brecciensis and Microtus (Terricola duodecimcostatus. This association is characteristic of the Middle Pleistocene. The morphological state of Cricetulus (A.) bursae, Arvicola aff. sapidus and Microtus (I.) brecciensis allows to place it in the advanced, but not final, Middle Pleistocene, which agrees with the numerical data of the site (243–337 ka) that places it in the MIS 8 or 9. The micromammals indicate the predominance of the open spaces with abundant vegetation mainly of herbaceous and bushes but also with some areas with trees. The climate would be of Mediterranean type, similar to the actual or perhaps a little milder and more humid. (Author)

  12. Parasitism of two zoonotic reservoirs Dasyprocta leporina and D. fuliginosa (Rodentia) from Amazonas, with Trichostrongylina nematodes (Heligmonellidae): description of a new genus and a new species.

    Science.gov (United States)

    Gonçalves, Alessandra Queiroga; Pinto, Roberto Magalhães; Durette-Desset, Marie-Claude

    2007-09-01

    A new genus and a new species of Heligmonellidae nematodes are described parasiting the stomach of three agoutis (two Dasyprocta fuliginosa and one D. leporina) captured in the middle and high Negro river microregion, state of Amazonas, Brazil. The new genus, as well as its type-species, are closely related to the trichostrongylids included in Fuellebornema, particularly on what concerns the pattern of the caudal bursa, but differing from them by the characteristics of the synlophe, that presents a poorly developed carene, when compared to the referred number of body ridges in Freitastrongylus n. gen. and consequently in F. angelae n. sp.,in which the ridges are well developed and the carene at mid-body has a similar size when compared to the ridge situated in front of the right field (ridge no. 5). Caudal bursa is of the type 1-4, with rays 9 shorter than rays 10, with a very long genital cone.

  13. Parasitism of two zoonotic reservoirs Dasyprocta leporina and D. fuliginosa (Rodentia from Amazonas, with Trichostrongylina nematodes (Heligmonellidae: description of a new genus and a new species

    Directory of Open Access Journals (Sweden)

    Alessandra Queiroga Gonçalves

    2007-09-01

    Full Text Available A new genus and a new species of Heligmonellidae nematodes are described parasiting the stomach of three agoutis (two Dasyprocta fuliginosa and one D. leporina captured in the middle and high Negro river microregion, state of Amazonas, Brazil. The new genus, as well as its type-species, are closely related to the trichostrongylids included in Fuellebornema, particularly on what concerns the pattern of the caudal bursa, but differing from them by the characteristics of the synlophe, that presents a poorly developed carene, when compared to the referred number of body ridges in Freitastrongylus n. gen. and consequently in F. angelae n. sp.,in which the ridges are well developed and the carene at mid-body has a similar size when compared to the ridge situated in front of the right field (ridge no. 5. Caudal bursa is of the type 1-4, with rays 9 shorter than rays 10, with a very long genital cone.

  14. An integrative appraisal of the diversification in the Atlantic forest genus Delomys (Rodentia: Cricetidae: Sigmodontinae) with the description of a new species.

    Science.gov (United States)

    Gonçalves, Pablo Rodrigues; de Oliveira, João Alves

    2014-01-30

    Recent taxonomic studies on Neotropical mammals have benefited from the use of genetic data to unravel and recognize species diversity in a number of genera, including the Atlantic forest endemic genus Delomys. However, the success of this approach depends on ability to link genetically identified lineages to species names based on voucher specimens that lack genetic data. Cytogenetic studies in the Atlantic forest endemic rodent genus Delomys have revealed two widespread karyotypes, 2n=72/FN=90 and 2n=82/FN=80, which have been respectively ascribed to Delomys sublineatus (Thomas, 1903) and D. dorsalis (Hensel, 1872). More recently, a third karyotype, 2n=82/FN=86, reported from specimens collected on two montaintops in southeastern Brazil, was interpreted as evidence for a third species, D. collinus Thomas, 1917. This nominal form had originally been described as a subspecies of D. dorsalis from Itatiaia, one of the mountain ranges where the third karyotype was later detected. The detection of two sympatric karyotypes at the type locality of D. collinus in the Itatiaia mountain range, Southeastern Brazil, prompted a reevaluation of the association of karyomorphs and species names. In this paper, we assessed the congruence of molecular (cytochrome b), cytogenetic and morphological characters, to diagnose the species in the genus, including data from recently collected series and type specimens. Our results indicate that the genetic and morphological patterns are largely congruent with the recognition of three species, each of which is karyotypically and morphologically diagnosable. Our morphological analyses of sympatric samples from Itatiaia refute the former association of the 2n=82/FN=86 karyotype with the holotype of D. dorsalis collinus (which is more similar to D. dorsalis with 2n=82/FN=80). Instead, we recognize and describe a new species for the 2n=82/FN=86 populations from the highest altitudinal zones of the Itatiaia and Caparaó mountains. The

  15. patterns of coexistence in synaptomys cooperi and microtus pennsylvanicus

    OpenAIRE

    Linzey, A. V.

    1984-01-01

    The microtine rodents Synaptomys cooperi and Microtus pennsylvanicus are sympatric, have a similar life styles, and occur in the same general habitats. The object of this study was to determine the importance of competition in a Microtus-Synaptomys system in southwestern Virginia as a test of the general hypothesis that herbivorous rodents compete directly for space and indirectly for food. The following patterns were observed: (1) Undisturbed populations of Microtus and Synaptomys exhibited ...

  16. SMALL MAMMAL FAUNA (INSECTIVORA AND RODENTIA FROM THE FLOOD PLAIN OF TIMIŞ RIVER

    Directory of Open Access Journals (Sweden)

    I. DUMA

    2005-01-01

    Full Text Available Faunistical data regarding small mammal fauna from the south-western part of Romania are very poor and not to date. The only serious studies were made between 1966 and 1971 along the Danube River by the researchers: A. Popescu, Pr. Barbu, M. Hamar, M. Şutova. In our collection campaign we captured 6 species of Insectivora: Erinaceus concolor, Talpa europaea, Sorex araneus, Neomys fodiens, Neomys anomalus and Crocidura leucodon. Also we caught 9 species of rodents (Rodentia: Muscardinius avellanarius, Mus musculus, Mus spicilegus, Micromys minutus, Pitymis subterraneus, Apodemus flavicollis, Apodemus sylvaticus, Apodemus agrarius, and Microtus arvalis. Our study brings new faunistical data regarding distribution of some small species of mammals in this part of Romania. Also we confirm the presence of Apodemus agrarius kahmanni in the Banat.

  17. Proliferating Cell Nuclear Antigen (PCNA) expression in tooth primordia in the field vole (Microtus agrestis, Rodentia)

    Czech Academy of Sciences Publication Activity Database

    Matulová, Petra; Witter, K.; Míšek, Ivan

    2002-01-01

    Roč. 43, 2/3 (2002), s. 138-142 ISSN 0300-8207 R&D Projects: GA AV ČR IAA7039901; GA ČR GP304/01/P021; GA MŠk OC B8.20; GA AV ČR KSK6005114 Keywords : dentition * odontogenesis * proliferation marker Subject RIV: EB - Genetics ; Molecular Biology Impact factor: 1.646, year: 2002

  18. The development of palatal rugae in the European pine vole, Microtus subrerraneus (Arvicolidae, Rodentia)

    Czech Academy of Sciences Publication Activity Database

    Míšek, Ivan; Buchtová, M.; Tichý, F.; Putnová, I.

    2003-01-01

    Roč. 52, č. 2 (2003), s. 127-136 ISSN 0139-7893 R&D Projects: GA AV ČR IAA7039901 Grant - others:GA FRVŠ(XC) 11113 Institutional research plan: CEZ:AV0Z5045916 Keywords : palatal ridge * prenatal development * secondary palate Subject RIV: ED - Physiology Impact factor: 0.494, year: 2003

  19. Systematic relationships within the Microtus arvalis (Rodentia: Cricetidae) group in Iran, inferred from cytogenetic analyses

    Czech Academy of Sciences Publication Activity Database

    Mahmoudi, A.; Zima, Jan; Kryštufek, B.; Darvish, J.; Aliabadian, M.; Arslan, A.

    2018-01-01

    Roč. 64, č. 1 (2018), s. 1-8 ISSN 0939-7140 Institutional support: RVO:68081766 Keywords : chromosome C-banding * karyotype * NORs * taxonomy Subject RIV: EG - Zoology Impact factor: 0.525, year: 2016

  20. Complete mitochondrial genome sequence of Marmota himalayana (Rodentia: Sciuridae) and phylogenetic analysis within Rodentia.

    Science.gov (United States)

    Chao, Q J; Li, Y D; Geng, X X; Zhang, L; Dai, X; Zhang, X; Li, J; Zhang, H J

    2014-04-14

    This is the first report of a complete mitochondrial genome sequence from Himalayan marmot (Marmota himalayana, class Marmota). We determined the M. himalayana mitochondrial (mt) genome sequence by using long-PCR methods and a primer-walking sequencing strategy with genus-specific primers. The complete mt genome of M. himalayana was 16,443 bp in length and comprised 13 protein-coding genes, 2 ribosomal RNA (rRNA) genes, 22 transfer RNA (tRNA) genes, and a typical control region (CR). Gene order and orientation were identical to those in mt genomes of most vertebrates. The heavy strand showed an overall A+T content of 63.49%. AT and GC skews for the mt genome of the M. himalayana were 0.012 and -0.300, respectively, indicating a nucleotide bias against T and G. The control region was 997 bp in size and displayed some unusual features, including absence of repeated motifs and two conserved sequence blocks (CSB2 and CSB3), which is consistent with observations from two other rodent species, Sciurus vulgaris and Myoxus glis. Phylogenetic analysis of complete mt DNA sequences without the control region including 30 taxa of Rodentia was performed with Maximum-Likelihood (ML) and Bayesian Inference (BI) methods and provided strong support for Sciurognathi polyphyly and Hystricognathi monophyly. This analysis also provided evidence that M. himalayana mt DNA was closely related to that from Sciurus vulgaris (Sciuridae) and was similar to mt DNA from Myoxus glis.

  1. Brucellosis of the common vole (Microtus arvalis).

    Science.gov (United States)

    Hubálek, Z; Scholz, H C; Sedlácek, I; Melzer, F; Sanogo, Y O; Nesvadbová, J

    2007-01-01

    A systemic disease occurred in a wild population of the common vole Microtus arvalis in South Moravia (Czech Republic) during the years 1999-2003. Acute infections were characterized by edema of extremities, occasionally with colliquating abscesses, arthritis, lymphadenitis, perforations of the skin resulting from colliquated abscesses, orchitis, and peritoneal granulomas. From the clinical samples, small Gram-negative coccobacilli were isolated and identified as Ochrobactrum intermedium by API 20NE and colistin sensitivity profiles. However, subsequent rrs (16S rRNA) and recA (recombinase A) gene sequencing analysis of two isolates (CCM 4915=CAPM 6434; CCM 4916=CAPM 6435) identified them as Brucella sp. with sequence identities of 100% to other Brucella spp. Analysis of the omp2a/b genes confirmed the two isolates as Brucella. In AMOS polymerase chain reaction (PCR), a 2000-bp fragment was generated that was not seen in other brucellae. Experimental infection of outbred ICR mice with these isolates resulted in a mortality rate of 50%. Based on the results of the molecular investigations and the mortality observed in experimentally infected mice we conclude that the epizootic was caused by Brucella sp. and not by Ochrobactrum intermedium. The study demonstrates the limitations of commercial biochemical test systems in accurately differentiating among Ochrobactrum and Brucella.

  2. Gastrointestinal helminths (Cestoda, Chabertiidae and Heligmonellidae) of Pogonomys loriae and Pogonomys macrourus (Rodentia: Muridae) from Papua Indonesia and Papua New Guinea with the description of a new genus and two new species.

    Science.gov (United States)

    Smales, L R

    2014-11-28

    Pieces of cestode, not indentified further, and 12 species of nematode including 1 new genus, 3 new species and 7 putative new species from the Families Chabertiidae and Heligmonellidae were collected from the digestive tracts of 16 Pogonomys loriae and 19 P. macrurous (Murinae: Hydromyini) from Papua, Indonesia and Papua New Guinea. The chabertiid Cyclodontostomum purvisi and the heligmonellid Odilia mackerrasae have been described previously from endemic murids. Hasanuddinia pogonomyos n. sp. can be distinguished from its congeners by the number of ridges in the synlophe, length of spicules and having a vagina with a dorsal diverticulum. Odilia dividua n. sp. is larger than its congeners, has a longer oesophagus, relatively shorter spicules and larger eggs. Pogonomystrongylus domaensis n. gen., n. sp. differs from all other genera in the Heligmonellidae in the characters of the synlophe, 7-10 ridges oriented sub frontally with a single left ventral ridge hypertrophied. Species richness of the nematode assemblages of P. loriae and P. macrourus are comparable to those of Abeomelomys sevia, Chiruromys vates and Coccymys rummleri when numbers of hosts examined are considered. Species composition was distinctive with 12, including the 7 putative species, of 14 species presently known only from species of Pogonomys. Similarities between the nematode fauna of endemic rodent hosts from Indonesia and Papua New Guinea were noted.

  3. Food supply (Orthoptera, Mantodea, Rodentia and Eulipotyphla and food preferences of the red-footed falcon (Falco vespertinus in Slovakia

    Directory of Open Access Journals (Sweden)

    Krištín Anton

    2017-12-01

    Full Text Available Food supply in the nesting territories of species has a key role to the species diet composition and their breeding success. Red-footed falcon (Falco vespertinus preys predominantly on larger insect species with a supplementary portion of smaller vertebrates. In the breeding periods 2014 and 2016 their food supply, focusing on Orthoptera, Mantodea, Rodentia and Eulipotyphla, was analysed at five historical nesting sites of the species in Slovakia. Preference for these prey groups in the diet was also studied at the last active nesting site in this country. Overall we recorded 45 Orthoptera species (of which 23 species are known as the food of the red-footed falcon, one species of Mantodea, 10 species of Rodentia (of which 2 species are known as the food of the red-footed falcon and 5 species of the Eulipotyphla order in the food supply. With regard to the availability of the falcons' preferred food, in both years the most suitable was the Tvrdošovce site, which continuously showed the greatest range and abundance of particular species. In the interannual comparison the insects showed lower variability in abundance than the small mammals. In 2014 the growth of the common vole (Microtus arvalis population culminated and with the exception of a single site (Bodza a slump in abundance was recorded in 2016. In comparing the diet composition with the food supply at the last Slovak breeding site Rusovce (Special Protection Area Sysľovské polia, we recorded significant preference for grasshopper Caliptamus italicus (in 2014, common vole (in 2016 and cricket Tettigonia viridissima (in both years in the falcons' diet. They did not prey on the Apodemus sylvaticus species belonging among the abundant small mammal species in that locality. Conservation measures in the agricultural landscape are discussed in relation to homogeneous red-footed falcon breeding territories.

  4. Ultrastructure of the spermatozoon of the trematode Notocotylus noyeri (Digenea: Notocotylidae), a parasite of Microtus arvalis (Rodentia: Cricetidae).

    Science.gov (United States)

    Ibnou Ndiaye, Papa; Torres, Jordi; Eira, Catarina; Shimalov, Vladimir V; Miquel, Jordi

    2015-01-01

    In the present paper, we describe the ultrastructure of the spermatozoon of the notocotylid Notocotylus noyeri (Joyeux, 1922) by means of transmission electron microscopy. The mature spermatozoon of N. noyeri exhibits the general pattern described in the majority of digeneans: two axonemes of the 9 + "1" pattern of the Trepaxonemata, nucleus, mitochondria, parallel cortical microtubules, spine-like bodies and ornamentation of the plasma membrane. The glycogenic nature of the electron-dense granules was evidenced applying the test of Thiéry. The ultrastructural features of the spermatozoon of N. noyeri present some differences in relation to those of the Pronocephalidea described until now, but confirm a general pattern for the Notocotylidae, namely a spermatozoon with two mitochondria and an anterior region with ornamentation of the plasma membrane associated with spine-like bodies. The posterior extremity of the spermatozoon exhibits only some microtubules after the disorganisation of the second axoneme. The present study confirms that some ultrastructural characters of the sperm cell such as the presence or absence of lateral expansions, the number of mitochondria and the morphology of both anterior and posterior spermatozoon extremities are useful for phylogenetic purposes within the Pronocephaloidea. Thus, unlike notocotylids, pronocephalids exhibit external ornamentation and a lateral expansion in the anterior spermatozoon region. Moreover, notocotylid spermatozoa present two mitochondria, whereas pronocephalid spermatozoa exhibit a single mitochondrion. Finally, pronocephalids are characterised by a type 2 posterior spermatozoon extremity, whereas notocotylids exhibit a type 3 posterior spermatozoon extremity.

  5. Variations in C-heterochromatin and AgNOR distribution in the common vole (Microtus arvalis sensu lato) (Mammalia: Rodentia)

    Czech Academy of Sciences Publication Activity Database

    Yorulmaz, T.; Zima, Jan; Arslan, A.; Kankilic, T.

    2013-01-01

    Roč. 65, č. 3 (2013), s. 989-995 ISSN 0354-4664 Institutional support: RVO:68081766 Keywords : Common vole * Altai vole * Central Europe * Anatolia * C-banding * AgNOR staining Subject RIV: EG - Zoology Impact factor: 0.607, year: 2013

  6. Origin and developmental fate of vestigial tooth primordia in the upper diastema of the field vole (Microtus agrestis, Rodentia)

    Czech Academy of Sciences Publication Activity Database

    Witter, K.; Lesot, H.; Peterka, Miroslav; Vonesch, J. L.; Míšek, Ivan; Peterková, Renata

    2005-01-01

    Roč. 50, - (2005), s. 401-409 ISSN 0003-9969 R&D Projects: GA MŠk OC B23.001; GA ČR GA304/02/0448 Institutional research plan: CEZ:AV0Z50390512 Keywords : tooth development * odontogenesis * embryo Subject RIV: EB - Genetics ; Molecular Biology Impact factor: 1.288, year: 2005

  7. Genetic variation and evolution in the genus Apodemus (Muridae: Rodentia)

    Czech Academy of Sciences Publication Activity Database

    Macholán, Miloš; Filippucci, M. G.; Michaux, J. R.

    2002-01-01

    Roč. 75, - (2002), s. 395-419 ISSN 0024-4066 R&D Projects: GA AV ČR KSK6005114 Institutional research plan: CEZ:AV0Z5045916 Keywords : electrophoresis * genetic differentiation * Palaeartic region Subject RIV: EB - Genetics ; Molecular Biology Impact factor: 1.705, year: 2002

  8. Change in somatic growth rates of Microtus pennsylvanicus as a result of cross-fostering with Peromyscus leucopus

    Science.gov (United States)

    Harvey R. Smith

    1977-01-01

    A litter of five meadow voles (Microtus pennsylvanicus) was cross-fostered on a white-footed mouse (Peromyscus leucopus). All Microtus pups survived through weaning. Daily weight gain was 0.30 gm before weaning and 0.96 gm after weaning. When weaned, the Microtus pups were approximately 1/3...

  9. Experimental infection of meadow voles (Microtus pennsylvanicus) with sheep scrapie

    Science.gov (United States)

    Carlson, CM; Schneider, Jay R.; Pedersen, Janice C.; Heisey, Dennis M.; Johnson, Christopher J.

    2015-01-01

    Meadow voles (Microtus pennsylvanicus) are permissive to chronic wasting disease (CWD) infection, but their susceptibility to other transmissible spongiform encephalopathies (TSEs) is poorly characterized. In this initial study, we intracerebrally challenged 6 meadow voles with 2 isolates of sheep scrapie. Three meadow voles acquired a TSE after the scrapie challenge and an extended incubation period. The glycoform profile of proteinase K-resistant prion protein (PrP(res)) in scrapie-sick voles remained similar to the sheep inocula, but differed from that of voles clinically affected by CWD. Vacuolization patterns and disease-associated prion protein (PrP(Sc)) deposition were generally similar in all scrapie-affected voles, except in the hippocampus, where PrP(Sc) staining varied markedly among the animals. Our results demonstrate that meadow voles can acquire a TSE after intracerebral scrapie challenge and that this species could therefore prove useful for characterizing scrapie isolates.

  10. [Monitoring the Microtus fuscus plague epidemic in Sichuan province during 2000 - 2008.

    DEFF Research Database (Denmark)

    Wang, Li-Mao; Song, Xiao-Yu; Zhu, Xiao-Ping

    2009-01-01

    OBJECTIVE: To analyze the epidemic tendency of Microtus fuscus plague during 2000 - 2008 in Sichuan province. METHODS: To investigate the plague each year according to "overall Plan of the Plague in the Whole Nation" and "Surveillance Program of Sichuan Province Plague". RESULTS: There were plague...... of fleas, Callopsylla sparsilis, Amphipsylla tutua tutua and Rhadinopsylla dahurica vicina, with the overall infection rate as 0.054%. CONCLUSION: Plague among Microtus fuscus showed a continuous epidemic in Sichuan province during 2000 - 2008....

  11. Trichostrongylina (Nematoda, Heligmosomoidea coparasites in Dasyprocta fuliginosa Wagler (Rodentia, Dasyproctidae from Brazil, with the re-establishment of the genus Avellaria Freitas & Lent and the description of two new species Trichostrongylina (Nematoda, Heligmosomoidea co-parasitos em Dasyprocta fuliginosa Wagler (Rodentia, Dasyproctidae do Brasil, com o restabelecimento do gênero Avellaria Freitas & Lent e a descrição de duas novas espécies

    Directory of Open Access Journals (Sweden)

    Marie C. Durette-Desset

    2006-06-01

    Full Text Available Two new tichostrongylid nematodes of the family Viannaiidae Durette-Desset & Chabaud, 1981 coparasites in Dasyprocta fuliginosa Wagler, 1832 from the State of Amazonas, Brazil, are described: Viannella trichospicula sp. nov. is differentiated from the other species of the genus by the extreme slenderness of its spicules. Avellaria intermedia sp. nov. is distinguished from the single type species Avellaria avellari Freitas & Lent, 1934, by a smaller number of cuticular ridges (17 versus 27, a higher ratio of spicule length/ body length (8% versus 5.6% and spicules with a single tip. This genus, synonymized with the genus Viannella Travassos, 1918, by Durette-Desset (1968 is re-established, the female being didelphic. It is the first record of a nematode of the family Viannaiidae in a host of the family Dasyproctidae Bonaparte, 1838.Dois novos nematóides tricostrongilídeos da família Viannaiidae Durette-Desset & Chabaud, 1981 co-parasitos em um espécime de Dasyprocta fuliginosa Wagler, 1832 do Estado do Amazonas, Brasil, são descritos: Viannella trichospicula sp. nov. distingue-se das espécies do gênero, pelos espículos extremamente delgados. Avellaria intermedia sp. nov. diferencia-se da espécie tipo e única do gênero Avellaria avellari Freitas & Lent, 1934, pelo menor número de arestas cuticulares (17 comparado a 27, pela maior relação entre o tamanho do espículo e o comprimento do corpo (8% comparado a 5,6% e espículos com extremidade única. Este gênero, que havia sido considerado sinônimo de Viannella Travassos, 1918, por Durette-Desset (1968, é restabelecido; as fêmeas são didelfas. Este é o primeiro registro de um nematóide da família Viannaiidae em um hospedeiro da família Dasyproctidae Bonaparte, 1838.

  12. Brucella microti sp. nov., isolated from the common vole Microtus arvalis.

    Science.gov (United States)

    Scholz, Holger C; Hubalek, Zdenek; Sedlácek, Ivo; Vergnaud, Gilles; Tomaso, Herbert; Al Dahouk, Sascha; Melzer, Falk; Kämpfer, Peter; Neubauer, Heinrich; Cloeckaert, Axel; Maquart, Marianne; Zygmunt, Michel S; Whatmore, Adrian M; Falsen, Enevold; Bahn, Peter; Göllner, Cornelia; Pfeffer, Martin; Huber, Birgit; Busse, Hans-Jürgen; Nöckler, Karsten

    2008-02-01

    Two Gram-negative, non-motile, non-spore-forming, coccoid bacteria (strains CCM 4915(T) and CCM 4916), isolated from clinical specimens of the common vole Microtus arvalis during an epizootic in the Czech Republic in 2001, were subjected to a polyphasic taxonomic study. On the basis of 16S rRNA (rrs) and recA gene sequence similarities, both isolates were allocated to the genus Brucella. Affiliation to Brucella was confirmed by DNA-DNA hybridization studies. Both strains reacted equally with Brucella M-monospecific antiserum and were lysed by the bacteriophages Tb, Wb, F1 and F25. Biochemical profiling revealed a high degree of enzyme activity and metabolic capabilities not observed in other Brucella species. The omp2a and omp2b genes of isolates CCM 4915(T) and CCM 4916 were indistinguishable. Whereas omp2a was identical to omp2a of brucellae from certain pinniped marine mammals, omp2b clustered with omp2b of terrestrial brucellae. Analysis of the bp26 gene downstream region identified strains CCM 4915(T) and CCM 4916 as Brucella of terrestrial origin. Both strains harboured five to six copies of the insertion element IS711, displaying a unique banding pattern as determined by Southern blotting. In comparative multilocus VNTR (variable-number tandem-repeat) analysis (MLVA) with 296 different genotypes, the two isolates grouped together, but formed a separate cluster within the genus Brucella. Multilocus sequence typing (MLST) analysis using nine different loci also placed the two isolates separately from other brucellae. In the IS711-based AMOS PCR, a 1900 bp fragment was generated with the Brucella ovis-specific primers, revealing that the insertion element had integrated between a putative membrane protein and cboL, encoding a methyltransferase, an integration site not observed in other brucellae. Isolates CCM 4915(T) and CCM 4916 could be clearly distinguished from all known Brucella species and their biovars by means of both their phenotypic and molecular

  13. [Participation of murine rodents in circulation of agents of tularemia and hemorrhagic fever in Kola peninsula].

    Science.gov (United States)

    Kataev, G D; Kuzovleva, N M; Bespiatova, L A

    2008-01-01

    Results of virological and bacteriological studies of wild mammals of 11 species from Rodentia and Cricetidae genuses during epizootic period (spring-autumn 2006-2007) in Murmansk region are presented. The number of red-baked mice (Clethrionomys) and common vole (Microtus) was rising. Antigen of hemorrhagic fever with renal syndrome virus as well as tularemia pathogen were found in background rodent species.

  14. Muridae (Rodentia) from the lower Turolian of Crevillente (Alicante, Spain)

    NARCIS (Netherlands)

    Martín Suárez, E.; Freudenthal, M.

    1993-01-01

    The fauna of Muridae (Rodentia) from the Lower Turolian of Crevillente (Alicante, SE Spain) contains species attributed to the genera Huerzelerimys, Parapodemus, and Occitanomys. The material described allows a detailed biostratigraphy of Upper Miocene deposits of SE Spain. En este trabajo se

  15. Prevalence, genetic identity and vertical transmission of Babesia microti in three naturally infected species of vole, Microtus spp. (Cricetidae).

    Science.gov (United States)

    Tołkacz, Katarzyna; Bednarska, Małgorzata; Alsarraf, Mohammed; Dwużnik, Dorota; Grzybek, Maciej; Welc-Falęciak, Renata; Behnke, Jerzy M; Bajer, Anna

    2017-02-06

    Vertical transmission is one of the transmission routes for Babesia microti, the causative agent of the zoonotic disease, babesiosis. Congenital Babesia invasions have been recorded in laboratory mice, dogs and humans. The aim of our study was to determine if vertical transmission of B. microti occurs in naturally-infected reservoir hosts of the genus Microtus. We sampled 124 common voles, Microtus arvalis; 76 root voles, M. oeconomus and 17 field voles, M. agrestis. In total, 113 embryos were isolated from 20 pregnant females. Another 11 pregnant females were kept in the animal house at the field station in Urwitałt until they had given birth and weaned their pups (n = 62). Blood smears and/or PCR targeting the 550 bp 18S rRNA gene fragment were used for the detection of B. microti. Selected PCR products, including isolates from females/dams and their embryos/pups, were sequenced. Positive PCR reactions were obtained for 41% (89/217) of the wild-caught voles. The highest prevalence of B. microti was recorded in M. arvalis (56/124; 45.2%), then in M. oeconomus (30/76; 39.5%) and the lowest in M. agrestis (3/17; 17.7%). Babesia microti DNA was detected in 61.4% (27/44) of pregnant females. Vertical transmission was confirmed in 81% (61/75) of the embryos recovered from Babesia-positive wild-caught pregnant females. The DNA of B. microti was detected in the hearts, lungs and livers of embryos from 98% of M. arvalis, 46% of M. oeconomus and 0% of M. agrestis embryos from Babesia-positive females. Of the pups born in captivity, 90% were born to Babesia-positive dams. Babesia microti DNA was detected in 70% (35/50) of M. arvalis and 83% (5/6) of M. oeconomus pups. Congenitally acquired infections had no impact on the survival of pups over a 3-week period post partum. Among 97 B. microti sequences, two genotypes were found. The IRU1 genotype (Jena-like) was dominant in wild-caught voles (49/53; 92%), pregnant females (9/11; 82%) and dams (3/5; 60%). The IRU2

  16. Short-Term Rhythms in Foraging Behaviour of the Common Vole, Microtus arvalis

    NARCIS (Netherlands)

    Daan, Serge; Slopsema, Steven

    1978-01-01

    1. The common vole, Microtus arvalis, like other vole species, in captivity has a short-term activity rhythm in daytime, with a period of circa two hours. Trapping records show that this rhythm exists also in field conditions, with the population in synchrony to some degree; a correlation of

  17. Genetic analysis of hantaviruses carried by Myodes and Microtus rodents in Buryatia

    Directory of Open Access Journals (Sweden)

    Lundkvist Åke

    2008-01-01

    Full Text Available Abstract Hantavirus genome sequences were recovered from tissue samples of Myodes rufocanus, Microtus fortis and Microtus oeconomus captured in the Baikal area of Buryatia, Russian Federation. Genetic analysis of S- and M-segment sequences of Buryatian hantavirus strains showed that Myodes-associated strains belong to Hokkaido virus (HOKV type while Microtus-associated strains belong to Vladivostok virus (VLAV type. On phylogenetic trees Buryatian HOKV strains were clustered together with M. rufocanus- originated strains from Japan, China and Far-East Russia (Primorsky region. Buryatian Microtus- originated strains shared a common recent ancestor with M. fortis- originated VLAV strain from Far-East Russia (Vladivostok area. Our data (i confirm that M. rufocanus carries a hantavirus which is similar to but distinct from both Puumala virus carried by M. glareolus and Muju virus associated with M. regulus, (ii confirm that M. fortis is the natural host for VLAV, and (iii suggest M. oeconomus as an alternative host for VLAV.

  18. Relantionship between vestibular lamina, dental lamina, and the developing oral vestibule in the upper jaw of the field vole (Microtus agrestis, Rodentia)

    Czech Academy of Sciences Publication Activity Database

    Witter, K.; Pavlíková, H.; Matulová, Petra; Míšek, Ivan

    2005-01-01

    Roč. 265, - (2005), s. 264-270 ISSN 0362-2525 R&D Projects: GA ČR GA304/02/0448; GA MŠk OC B23.001 Institutional research plan: CEZ:AV0Z50450515 Keywords : mouth * dentition * tooth Subject RIV: EB - Genetics ; Molecular Biology Impact factor: 1.421, year: 2005

  19. A new karyotype of Calomys (Rodentia, Sigmodontinae

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    Lima J. Fernando de S.

    2001-01-01

    Full Text Available The genus Calomys Waterhouse, 1837 is widely distributed within South America, being found in Venezuela, Colombia, Peru, Bolivia, Brazil, Paraguay, Uruguay and Argentina. Specimens of Calomys were collected in Formoso do Araguaia, Tocantins, Brazil. For chromosome characterization standard staining techniques and as G-banding and nucleolar organizer region were used. The karyotype was 2n=46 and AN=66. The X chromosome is a medium metacentric and the Y chromosome a small acrocentric chromosome. Chromosome homologies with other species were observed. Probably, karyotype differences were basically due to Robertsonian rearrangements.

  20. Extended longevity of reproductives appears to be common in Fukomys mole-rats (Rodentia, Bathyergidae.

    Directory of Open Access Journals (Sweden)

    Philip Dammann

    Full Text Available African mole-rats (Bathyergidae, Rodentia contain several social, cooperatively breeding species with low extrinsic mortality and unusually high longevity. All social bathyergids live in multigenerational families where reproduction is skewed towards a few breeding individuals. Most of their offspring remain as reproductively inactive "helpers" in their natal families, often for several years. This "reproductive subdivision" of mole-rat societies might be of interest for ageing research, as in at least one social bathyergid (Ansell's mole-rats Fukomys anselli, breeders have been shown to age significantly slower than non-breeders. These animals thus provide excellent conditions for studying the epigenetics of senescence by comparing divergent longevities within the same genotypes without the inescapable short-comings of inter-species comparisons. It has been claimed that many if not all social mole-rat species may have evolved similar ageing patterns, too. However, this remains unclear on account of the scarcity of reliable datasets on the subject. We therefore analyzed a 20-year breeding record of Giant mole-rats Fukomys mechowii, another social bathyergid species. We found that breeders indeed lived significantly longer than helpers (ca. 1.5-2.2fold depending on the sex, irrespective of social rank or other potentially confounding factors. Considering the phylogenetic positions of F. mechowii and F. anselli and unpublished data on a third Fukomys-species (F. damarensis showing essentially the same pattern, it seems probable that the reversal of the classic trade-off between somatic maintenance and sexual reproduction is characteristic of the whole genus and hence of the vast majority of social mole-rats.

  1. Establishment of animal model for Echinococcus inoculation infection in Microtus fuscus in Qinghai-Tibet Plateau

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    WANG Zhan

    2018-02-01

    Full Text Available ObjectiveTo analyze whether Microtus fuscus in Qinghai-Tibet Plateau can be used as an animal model for Echinococcus infection. MethodsSixty wild voles (Microtus fuscus were equally divided into groups A, B, and C to undergo Echinococcus inoculation through subcutaneous injection, direct transhepatic approach, and percutaneous transhepatic approach, respectively. Three months later, the infection rate and mortality rate were determined. After the model animals were sacrificed, HE staining was performed for the infiltration zone of lesion (2-3 mm near the lesion, the area adjacent to the lesion and 50% of the lesion, the center of lesion (non-liquefied area, the liquefied area of lesion, the margin of lesion (not including the normal tissue, and 70% of the lesion, and the pathological structures of hydatid lesions were observed under a microscope. Protoscoleces were extracted from the lesions for in vitro culture. The chi-square test was used for comparison of categorical data. ResultsThe success rate of Echinococcus infection in groups A, B, and C were 60%, 80%, and 70%, respectively, with no significant difference between the three groups (χ2=4.138, P=0.126. The mortality rates of groups A, B, and C were 5%, 20%, and 15%, respectively, with no significant difference between the three groups (χ2=5.201, P=0.107. HE staining showed that the red-stained vesicles had thin, discontinuous cuticular layers, with massive inflammatory cell infiltration around the vesicles; no protoscoleces were observed in all sections. After in vitro culture and staining of the lesion tissue, a large number of live protoscoleces were observed, unstained and with motility. ConclusionThis study confirms that Microtus fuscus, an endemic species in Qinghai-Tibet Plateau, can be used as an animal model for Echinococcus infection. Subcutaneous injection is an appropriate method for Echinococcus inoculation.

  2. Effect of population density on reproduction in Microtus fortis under laboratory conditions.

    Science.gov (United States)

    Han, Qunhua; Zhang, Meiwen; Guo, Cong; Shen, Guo; Wang, Yong; Li, Bo; Xu, Zhenggang

    2014-06-01

    Between December 2011 and March 2012, the reproductive characteristics of Microtus fortis reared in the laboratory at different population densities were assessed. In all, 258 male and female voles were randomly divided into 4 groups and reared at densities of 2, 4, 6, and 8 animals per cage (sex ratio: 1:1). The results showed that the pregnancy rate (χ2 = 21.671, df = 3, P population density groups, but the mean litter size (mean ± SD) was not (F = 2.669, df = 3, P > 0.05). In particular, the reproductive index and sex hormone levels showed a significant difference among the different density groups studied.

  3. Phenomenon in the Evolution of Voles (Mammalia, Rodentia, Arvicolidae

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    Rekovets L. I.

    2017-04-01

    Full Text Available This paper presents analytical results of the study of adaptatiogenesis within the family Arvicolidae (Mammalia, Rodentia based of morphological changes of the most functional characters of their masticatory apparatus — dental system — through time. The main directions of the morphological differentiation in parallel evolution of the arvicolid tooth type within the Cricetidae and Arvicolidae during late Miocene and Pliocene were identified and substantiated. It is shown that such unique morphological structure as the arvicolid tooth type has provided a relatively high rate of evolution of voles and a wide range of their adaptive radiation, as well as has determined their taxonomic and ecological diversity. The optimality of the current state of this group and evaluation of evolutionary prospects of Arvicolidae were presented and substantiated here as a phenomenon in their evolution.

  4. Ongoing ultradian activity rhythms in the common vole, Microtus arvalis, during deprivations of food, water and rest

    NARCIS (Netherlands)

    Gerkema, Menno P.; Leest, Floris van der

    1991-01-01

    The timing mechanism underlying ultradian (2-3 h) activity patterns in the common vole, Microtus arvalis, was studied using behavioural deprivation experiments. These were aimed at distinguishing between a homeostatic control mechanism, in which the rhythmic behaviour itself is part of the causal

  5. First cytogenetic information for Drymoreomys albimaculatus (Rodentia, Cricetidae, a recently described genus from Brazilian Atlantic Forest

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    Elkin Suárez-Villota

    2013-05-01

    Full Text Available The recently described taxon Drymoreomys albimaculatus is endemic to the Brazilian Atlantic Forest and its biology and genetics are still poorly known. Herein, we present, for the first time, the karyotype of the species using classical and molecular cytogenetics, which showed 2n=62, FN=62, and interstitial telomeric signals at the sex chromosomes. Nuclear and mitochondrial DNA sequences from the two karyotyped individuals verify the taxonomic identity as the recently described D. albimaculatus and confirm the relationship of the species with other Oryzomyini. Additionally, external morphological information is provided.

  6. Phylogenetic position of a monotypic Ethiopian endemic rodent genus Megadendromus (Rodentia, Nesomyidae)

    Czech Academy of Sciences Publication Activity Database

    Lavrenchenko, L. A.; Nadjafova, R. S.; Bekele, A.; Mironova, T. A.; Bryja, Josef

    2017-01-01

    Roč. 81, č. 1 (2017), s. 71-82 ISSN 0025-1461 Institutional support: RVO:68081766 Keywords : Dendromurinae * Ethiopia * karyotype * Megadendromus * phylogeny Subject RIV: EG - Zoology OBOR OECD: Zoology Impact factor: 0.805, year: 2016

  7. The conservation status of the tuco-tucos, genus Ctenomys (Rodentia: Ctenomyidae, in southern Brazil

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    FA. Fernandes

    Full Text Available The goal of conservation biology should be related to the preservation of species and also to the evolutionary and ecological processes that were responsible to form them and that are still acting. We review the conservation status of the species of tuco-tuco (Ctenomys torquatus, C. lami, C. minutus, and C. flamarioni from southern Brazil, and relate these data to the geological history of a particular area in that region, the Coastal Plain of the States of Rio Grande do Sul and Santa Catarina. The implications of the data on these species from the Southeastern Brazil are also discussed in relation to the evolution and risk of extinction of these subterranean rodents.

  8. Species of the genus Heligmosomum Railliet et Henry, 1909 (Nematoda, Heligmosominae) parasitizing Rodentia in Europe

    Czech Academy of Sciences Publication Activity Database

    Tenora, F.; Baruš, Vlastimil; Hildebrand, J.; Prokeš, Miroslav

    2002-01-01

    Roč. 50, č. 1 (2002), s. 7-13 ISSN 1211-8516 R&D Projects: GA AV ČR IAA6093104 Institutional research plan: CEZ:AV0Z6093917 Keywords : Heligmosominae * systematics * taxonomy Subject RIV: EG - Zoology

  9. The Stable Concordance Genus

    OpenAIRE

    Kearney, M. Kate

    2013-01-01

    The concordance genus of a knot is the least genus of any knot in its concordance class. Although difficult to compute, it is a useful invariant that highlights the distinction between the three-genus and four-genus. In this paper we define and discuss the stable concordance genus of a knot, which describes the behavior of the concordance genus under connected sum.

  10. Biological consequences of increased natural radiation background for Microtus oeconomus Pall. populations

    Energy Technology Data Exchange (ETDEWEB)

    Kudyasheva, Alevtina G. [Radioecology Department, Institute of Biology, Komi Scientific Center, Ural Division RAS, 28 Kommunisticheskaya ul., Syktyvkar 167982, Komi Republic (Russian Federation); Shishkina, Ludmila N. [Emanuel Institute of Biochemical Physics RAS, Kosygina 4, Moscow 119991 (Russian Federation); Shevchenko, Oksana G. [Radioecology Department, Institute of Biology, Komi Scientific Center, Ural Division RAS, 28 Kommunisticheskaya ul., Syktyvkar 167982, Komi Republic (Russian Federation)], E-mail: shevchenko@ib.komisc.ru; Bashlykova, Ludmila A.; Zagorskaya, Nadezhda G. [Radioecology Department, Institute of Biology, Komi Scientific Center, Ural Division RAS, 28 Kommunisticheskaya ul., Syktyvkar 167982, Komi Republic (Russian Federation)

    2007-09-15

    The results of long-term investigations (1981-1999) on the state of Microtus oeconomus Pall. (tundra vole) population, living under the increased natural radiation background for a long time (for more than 100 generations), are presented. Population density dynamics, morphophysiological parameters, state of the lipid peroxidation regulatory system in different tissues and the cytogenetic effects in bone marrow cells of animals have been analyzed. It is shown that tundra voles from the studied radioactively contaminated areas differ from those on natural radiation background area for the parameters measured. The results of this long-term investigation show that qualitatively new sub-populations of tundra vole on these areas have evolved, which are able to survive in radioactively contaminated environment.

  11. Biological consequences of increased natural radiation background for Microtus oeconomus Pall. populations

    International Nuclear Information System (INIS)

    Kudyasheva, Alevtina G.; Shishkina, Ludmila N.; Shevchenko, Oksana G.; Bashlykova, Ludmila A.; Zagorskaya, Nadezhda G.

    2007-01-01

    The results of long-term investigations (1981-1999) on the state of Microtus oeconomus Pall. (tundra vole) population, living under the increased natural radiation background for a long time (for more than 100 generations), are presented. Population density dynamics, morphophysiological parameters, state of the lipid peroxidation regulatory system in different tissues and the cytogenetic effects in bone marrow cells of animals have been analyzed. It is shown that tundra voles from the studied radioactively contaminated areas differ from those on natural radiation background area for the parameters measured. The results of this long-term investigation show that qualitatively new sub-populations of tundra vole on these areas have evolved, which are able to survive in radioactively contaminated environment

  12. Small terrestrial mammals of Albania: distribution and diversity (Mammalia, Eulipotyphla, Rodentia

    Directory of Open Access Journals (Sweden)

    Ferdinand Bego

    2018-03-01

    Full Text Available In this paper new records are reported for 23 species of small terrestrial mammals (STM of Albania collected during the field work campaigns organised in the framework of the project “Strengthening capacity in National Nature Protection – preparation for Natura 2000 network” (NaturAL in Albania during the summer and autumn of 2016 and 2017 Data on small mammals were primarily collected through Sherman live-trapping campaigns in six high priority protected areas of Albania: Korab-Koritnik, Bredhi i Hotovës, Tomorri, Llogara-Karaburun, Divjakë-Karavasta, Liqeni i Shkodrës (Skadar lake, Lëpushë-Vermosh. Other data were obtained by analysis of owl pellets or by direct observation of individuals (dead or alive in the field. For 21 species Erinaceus roumanicus, Neomys anomalus, Crocidura suaveolens, Crocidura leucodon, Suncus etruscus, Talpa stankovici/caeca, Myocastor coypus, Sciurus vulgaris, Glis glis, Dryomys nitedula, Muscardinus avellanarius, Microtus levis/arvalis, Microtus subterraneus, Microtus thomasi, Microtus felteni, Myodes glareolus, Apodemus sylvaticus, Apodemus flavicollis, Apodemus epimelas, Mus musculus, and Mus macedonicus additional records are provide and their distributions reviewed, while the presence of two new species of shrews (Sorex araneus and Sorex minutus for Albania is reported for the first time. A comprehensive review of the published and unpublished distribution records of STM species of the country is made, together with an updated checklist and distribution maps of the species.

  13. Multilocus phylogeny of arvicoline voles (Arvicolini, Rodentia) shows small tree terrace size

    Czech Academy of Sciences Publication Activity Database

    Martínková, Natália; Moravec, J.

    2012-01-01

    Roč. 61, 3-4 (2012), s. 254-267 ISSN 0139-7893 R&D Projects: GA AV ČR IAA600930609 Institutional support: RVO:68081766 Keywords : divergence * evolutionary history * supertree * supermatrix * phylogenetic tree terrace * Microtus * Arvicolinae Subject RIV: EG - Zoology Impact factor: 0.494, year: 2012

  14. Catalog of type specimens of recent mammals: Rodentia (Sciuromorpha and Castorimorpha) in the National Museum of Natural History, Smithsonian Institution

    Science.gov (United States)

    Fisher, Robert D.; Ludwig, Craig A.

    2012-01-01

    The type collection of Recent mammals in the Division of Mammals, National Museum of Natural History, Smithsonian Institution, contains 843 specimens bearing names of 820 species group taxa of Rodentia (Sciuromorpha and Castorimorpha) as of July 2011. This catalog presents a list of these holdings, which comprise 798 holotypes, 14 lectotypes, seven syntypes (30 specimens), and one neotype. In addition, we include three holotypes and 10 specimens that are part of syntype series that should be in the collection but cannot be found and three syntypes that were originally in this collection but are now known to be in other collections. One specimen that no longer has name-bearing status is included for the record. Forty-one of the names are new since the last type catalog. One new lectotype is designated. Suborders and families are listed as in Wilson and Reeder. Within families, currently recognized genera are arranged alphabetically. Within each currently recognized genus, accounts are arranged alphabetically by original published name. Information in each account includes original name and abbreviated citation thereto, current name if other than original, citation for first use of current name combination for the taxon (or new name combination if used herein for the first time), type designation, U.S. National Museum catalog number(s), preparation, age and sex, type locality, date of collection and name of collector, collector’s original number, and comments or additional information as appropriate. Digital photographs of each specimen serve as a condition report and will be linked to each electronic specimen record.

  15. Genética poblacional de cobayas de Colombia, Cavia spp. (Rodentia: Caviidae con marcadores moleculares RAPD

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    Héctor Aníbal Campos

    2008-09-01

    Full Text Available En el presente estudio, mostramos los primeros resultados moleculares de formas colombianas de Cavia. Claramente, la población silvestre de C. anolaimae fue genéticamente diferenciada de la forma doméstica, C. porcellus, tal como ha sido demostrado por otros autores utilizando resultados morfométricos, osteológicos y cariotípicos. Ambas especies mostraron un considerable nivel de diversidad genética, aunque el segundo taxon mostró niveles mayores de esta diversidad. Los niveles de heterogeneidad genética también fueron mayores entre las poblaciones de C. porcellus (F ST = 0.254 que entre las poblaciones de C. anolaimae (F ST = 0.118. Esos niveles significativos de heterogeneidad genética, y los consiguientes bajos niveles de flujo génico, fueron discutidos comparativamente con los resultados por otros autores analizando otros marcadores moleculares (citocromo-b mitocondrial. Los resultados aquí mostrados son coherentes con un complejo proceso de domesticación en Cavia porcellus.Population genetics of Colombian Guinea Pigs, Cavia spp. (Rodentia: Caviidae with RAPD molecular markers. The genus Cavia occurs in South America, mainly in grasslands.. We collected blood samples from 97 individuals in six field populations and analyzed them with RAPD molecular markers. One wild type (C. anolaimae was differentiated from the domestic form (C. porcellus, in agreement with other authors who used morphological, osteological and karyotipic results. Genetic diversity was considerable in both species, but higher in C. porcellus. The levels of genetic heterogeneity were also higher among the populations of C. porcellus (F ST = 0.254 than among the populations of C. anolaimae (F ST = 0.118. These significant levels of genetic heterogeneity, and the low levels of gene flow, were consistent with a complex domestication process for Cavia porcellus. Rev. Biol. Trop. 56 (3: 1481-1501. Epub 2008 September 30.

  16. Similarity of satellite DNA properties in the order Rodentia

    Energy Technology Data Exchange (ETDEWEB)

    Mazrimas, J.A.; Hatch, F.T.

    1977-09-01

    Satellite DNAs from 9 species of kangaroo rat (Dipodomys) have been characterized and have shown that the HS-..cap alpha.. and HS-..beta.. satellites, where present, are nearly identical in all species as to melting transition midpoint (Tm), and density in neutral CsCl, alkaline CsCl, and Cs/sub 2/SO/sub 4/-Ag/sup +/ gradients. However, the MS satellites exist in two internally similar classes. The satellite DNAs from three other rodents were characterized (densities listed are in neutral CsCl). The pocket gopher, Thomomys bottae, contains Th-..cap alpha.. (1.713 g/ml) and Th..beta.. (1.703 g/ml). The guinea pig (Cavia porcellus) contains Ca-..cap alpha.., Ca-..beta.. and Ca-..gamma.. at densities of 1.706 g/ml, 1.704 g/ml and 1.704 g/ml, respectively. The antelope ground squirrel (Ammospermophilus harrisi) contains Am-..cap alpha.., 1.708 g/ml, Am-..beta.., 1.717 g/ml, and Am-..gamma.., 1.707 g/ml. The physical and chemical properties of the alpha-satellites from the above four rodents representing four different families in two suborders of Rodentia were compared. They show nearly identical Tm, nucleoside composition of single strands, and single strand densities in alkaline CsCl. Similar comparisons on the second or third satellite DNAs from these rodents also indicate a close relationship to each other. Thus the high degree of similarity of satellite sequences found in such a diverse group of rodents suggests a cellular function that is subject to natural selection, and implies that these sequences have been conserved over a considerable span of evolutionary time since the divergence of these rodents about 50 million years ago.

  17. Similarity of satellite DNA properties in the order Rodentia

    Energy Technology Data Exchange (ETDEWEB)

    Mazrimas, J.A.; Hatch, F.T.

    1977-09-01

    We have characterized satellite DNAs from 9 species of kangaroo rat (Dipodomys) and have shown that the HS-..cap alpha.. and HS-..beta.. satellites, where present, are nearly identical in all species as to melting transition midpoint (Tm), and density in neutral CsCl, alkaline CsCl, and Cs/sub 2/SO/sub 4/-Ag/sup +/ gradients. However, the MS satellites exist in two internally similar classes. The satellite DNAs from three other rodents were characterized (densities listed are in neutral CsCl). The pocket gopher, Thomomys bottae, contains Th-..cap alpha.. (1.713 g/ml) and Th-..beta.. (1.703 g/ml). The guinea pig (Cavia porcellus) contains Ca-..cap alpha.., Ca-..beta.., and Ca-..gamma.. at densities of 1.706 g/ml, 1.704 g/ml, and 1.704 g/ml, respectively. The antelope ground squirrel (Ammospermophilus harrisi) contains Am-..cap alpha.., 1.708 g/ml, Am-..beta.., 1.717 g/ml, and Am-..gamma.., 1.707 g/ml. The physical and chemical properties of the alpha-satellites from the above four rodents representing four different families in two suborders of Rodentia were compared. They show nearly identical Tm, nucleoside composition of single strands, and single strand densities in alkaline CsCl. Similar comparisons on the second or third satellite DNAs from these rodents also indicate a close relationship to each other. Thus the high degree of similarity of satellite sequences found in such a diverse group of rodents suggests a cellular function that is subject to natural selection, and implies that these sequences have been conserved over a considerable span of evolutionary time since the divergence of these rodents about 50 million years ago.

  18. Partner Preference and Mating System of the Taiwan Field Vole (Microtus kikuchii

    Directory of Open Access Journals (Sweden)

    Chia-Chien Lee

    2014-06-01

    Full Text Available The mating system of the Taiwan field vole (Microtus kikuchii has been proposed to be monogamous. In monogamous animals, individuals should exhibit monogamy syndromes, such as little sexual dimorphism and strong pair bonding (a strong social preference for a familiar partner versus a strange one. In this study, we examined the effect of cohabitation on the partner preference. In a reciprocal experiment, all test individuals were cohabited with a heterosexual vole for 24 hr prior to the partner preference trials. We collected the feces of voles before and after the trials, and analyzed the concentration of fecal steroid hormones, including testosterone of males, progesterone and estradiol of females, and corticosterone of all voles. The results showed that the behaviors of focal voles were not influenced by the status (partner or stranger of stimulus vole. There was no significant relationship between steroid hormones and partner preference. Furthermore, the degree of sexual dimorphism in the Taiwan field vole was low, and similar to that of the monogamous prairie vole (M. ochrogaster. In light of this study and other recent findings, we propose that the mating system of the Taiwan field vole is not strictly monogamy, but flexible depending on environmental conditions.

  19. Application of grain baits to control common vole Microtus arvalis (Pallas, 1778 in alfalfa crops, Serbia

    Directory of Open Access Journals (Sweden)

    Jokić G.

    2012-01-01

    Full Text Available In order to compare the efficacies of conventional (cholecalciferol and bromadiolone and new (sodium selenite rodenticides, applied in the grain bait formulation on the whole-grain of wheat (Triticum aestivum and triticale (Triticasecale in alfalfa crops, experiments were conducted at two sites near Belgrade, Serbia, in the spring of 2009, using a standard EPPO method. The presence of rodent populations, their spatial distribution and density indices were evaluated by pretreatment census and rodenticide efficacy by counting active holes, 14 and 28 days after treatment. The average Microtus arvalis numbers of 158/ha and 184/ha were found to cause 7.4% and 9.6% alfalfa green biomass yield decreases, respectively. Twenty-eight days after treatment, the average efficacy of grain bait formulation (on wheat and triticale grains of sodium selenite and cholecalciferol was 81%, while bromadiolone which had a higher efficiency, 85%, in the control of the common vole in alfalfa crops. The analysis of variance (ANOVA showed that the origin of active substances, bases and associated interactions a.s x based on the efficacy-investigated grain baits did not have a statistically significant impact on the expression efficiency of the tested baits. Triticale grains can be used as carriers of active substances, sodium selenite, cholecalciferol or bromadiolone in preparation baits. Control of M. arvalis with the new rodenticide, sodium selenite, gave efficacy results about equal to that of cholecalciferol and bromadiolone and, therefore, provided a possible alternative rodenticide for vole control in alfalfa.

  20. An interactive survey panel regarding the effects of mice (Microtus spec.) on a young ecosystem

    Science.gov (United States)

    Zaplata, Markus; Maurer, Thomas; Boldt-Burisch, Katja; Schaaf, Wolfgang; Hinz, Christoph

    2015-04-01

    Apparent disturbance caused by soil megafauna took place for the very first time in 2014, after nine years of spontaneous vegetative succession of the constructed watershed Chicken Creek catchment (6 ha). This watershed was designed to investigate the initial phase of soil and ecosystem development under natural conditions including the detailed study of hydrologic processes and water-substrate-plant-atmosphere interactions. In autumn 2014, we recorded the primarily common vole (Microtus arvalis Pallas) activities (calamity), which altered the microtopography of the substrate surface: We counted mouse holes and diggings (for storage organs) at the same spatial units (permanent plots, >100 # of 5 m × 5 m) where we monitor the vegetation since the onset of the catchment. We are hence capable of analysing the effect of abundant vegetarian mice and biogenic macropores, e.g. on the occurrence and performance of the more than 150 vascular plant species present by comparing the respective coverage in 2013 (the pre-mice year) versus 2014, with or without accounting for the confounding effect of succession. Additionally elaborated insight on the 3-D architecture of the mice underground corridors and the nesting places (in situ) enables to extrapolate mass and volume of the moved substrate and the number of the nests of mice for the whole catchment. We report these results, anticipating a return service: Here, we ask for your expectation regarding the significance of the mice-made disturbance on the vegetation of the young ecosystem.

  1. Catalog of type specimens of recent mammals: orders Didelphimorpha through Chiroptera (Excluding Rodentia) in the National Museum of Natural History, Smithsonian Institution

    Science.gov (United States)

    Fisher, Robert D.; Ludwig, Craig A.

    2015-01-01

    The type collection of Recent Mammals in the Division of Mammals, National Museum of Natural History, Smithsonian Institution, contains 820 specimens bearing names of 809 species-group taxa of Didelphimorphia through Chiroptera, excluding Rodentia, as of June 2014. This catalog presents an annotated list of these holdings comprised of 788 holotypes, 26 lectotypes, 11 syntypes (22 specimens), and 4 neotypes. Included are several specimens that should be in the collection but cannot be found or are now known to be in other collections. One hundred and twenty-seven of the names are new since the last type catalog covering these orders, Poole and Schantz (1942). Five specimens reported in Poole and Schantz (1942) were subsequently sent to the Vertebrate Paleontology collection and are not included here. Orders and families are ordered as in Wilson and Reeder (2005); within families, currently recognized genera are arranged alphabetically; within each currently recognized genus, accounts are arranged alphabetically by original published name. Information in each account includes original name and abbreviated citation thereto, current name if other than original, citation for first use of current name combination for the taxon (or new name combination if used herein for the first time), type designation, U.S. National Museum catalog number(s), preparation, age and sex, date of collection and collector, original collector number, type locality, and remarks as appropriate. Digital photographs of each specimen will serve as a condition report and will be attached to each electronic specimen record.

  2. Food selection of Microtus agrestis in air-pollution affected clearings in the Beskydy Mts, Czech Republic

    Czech Academy of Sciences Publication Activity Database

    Heroldová, Marta

    2002-01-01

    Roč. 51, Suppl. 1 (2002), s. 83-91 ISSN 0139-7893. [Rodens et spatium /7./. České Budějovice, 10.07.2000-14.07.2000] R&D Projects: GA MŽP ZZ/620/2/97; GA ČR GA524/01/1316; GA AV ČR KSK6005114 Institutional research plan: CEZ:AV0Z6093917 Keywords : Microtus agrestis * diet * air pollution clearings Subject RIV: EH - Ecology, Behaviour Impact factor: 0.234, year: 2002

  3. Continental-scale footprint of balancing and positive selection in a small rodent (Microtus arvalis).

    Science.gov (United States)

    Fischer, Martin C; Foll, Matthieu; Heckel, Gerald; Excoffier, Laurent

    2014-01-01

    Genetic adaptation to different environmental conditions is expected to lead to large differences between populations at selected loci, thus providing a signature of positive selection. Whereas balancing selection can maintain polymorphisms over long evolutionary periods and even geographic scale, thus leads to low levels of divergence between populations at selected loci. However, little is known about the relative importance of these two selective forces in shaping genomic diversity, partly due to difficulties in recognizing balancing selection in species showing low levels of differentiation. Here we address this problem by studying genomic diversity in the European common vole (Microtus arvalis) presenting high levels of differentiation between populations (average F ST = 0.31). We studied 3,839 Amplified Fragment Length Polymorphism (AFLP) markers genotyped in 444 individuals from 21 populations distributed across the European continent and hence over different environmental conditions. Our statistical approach to detect markers under selection is based on a Bayesian method specifically developed for AFLP markers, which treats AFLPs as a nearly codominant marker system, and therefore has increased power to detect selection. The high number of screened populations allowed us to detect the signature of balancing selection across a large geographic area. We detected 33 markers potentially under balancing selection, hence strong evidence of stabilizing selection in 21 populations across Europe. However, our analyses identified four-times more markers (138) being under positive selection, and geographical patterns suggest that some of these markers are probably associated with alpine regions, which seem to have environmental conditions that favour adaptation. We conclude that despite favourable conditions in this study for the detection of balancing selection, this evolutionary force seems to play a relatively minor role in shaping the genomic diversity of the

  4. Continental-scale footprint of balancing and positive selection in a small rodent (Microtus arvalis.

    Directory of Open Access Journals (Sweden)

    Martin C Fischer

    Full Text Available Genetic adaptation to different environmental conditions is expected to lead to large differences between populations at selected loci, thus providing a signature of positive selection. Whereas balancing selection can maintain polymorphisms over long evolutionary periods and even geographic scale, thus leads to low levels of divergence between populations at selected loci. However, little is known about the relative importance of these two selective forces in shaping genomic diversity, partly due to difficulties in recognizing balancing selection in species showing low levels of differentiation. Here we address this problem by studying genomic diversity in the European common vole (Microtus arvalis presenting high levels of differentiation between populations (average F ST = 0.31. We studied 3,839 Amplified Fragment Length Polymorphism (AFLP markers genotyped in 444 individuals from 21 populations distributed across the European continent and hence over different environmental conditions. Our statistical approach to detect markers under selection is based on a Bayesian method specifically developed for AFLP markers, which treats AFLPs as a nearly codominant marker system, and therefore has increased power to detect selection. The high number of screened populations allowed us to detect the signature of balancing selection across a large geographic area. We detected 33 markers potentially under balancing selection, hence strong evidence of stabilizing selection in 21 populations across Europe. However, our analyses identified four-times more markers (138 being under positive selection, and geographical patterns suggest that some of these markers are probably associated with alpine regions, which seem to have environmental conditions that favour adaptation. We conclude that despite favourable conditions in this study for the detection of balancing selection, this evolutionary force seems to play a relatively minor role in shaping the genomic

  5. Identification and characterization of PhoP regulon members in Yersinia pestis biovar Microtus

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    Du Zongmin

    2008-03-01

    Full Text Available Abstract Background The transcription regulator PhoP has been shown to be important for Y. pestis survival in macrophages and under various in vitro stresses. However, the mechanism by which PhoP promotes bacterial intracellular survival is not fully understood. Our previous microarray analysis suggested that PhoP governed a wide set of cellular pathways in Y. pestis. A series of biochemical experiments were done herein to study members of the PhoP regulon of Y. pestis biovar Microtus. Results By using gel mobility shift assay and quantitative RT-PCR, a total of 30 putative transcription units were characterized as direct PhoP targets. The primer extension assay was further used to determine the transcription start sites of 18 PhoP-dependent promoters and to localize the -10 and -35 elements. The DNase I footprinting was used to identify the PhoP-binding sites within 17 PhoP-dependent promoters, enabling the identification of PhoP box and matrix that both represented the conserved signals for PhoP recognition in Y. pestis. Data presented here providing a good basis for modeling PhoP-promoter DNA interactions that is crucial to the PhoP-mediated transcriptional regulation. Conclusion The proven direct PhoP targets include nine genes encoding regulators and 21 genes or operons with functions of detoxification, protection against DNA damages, resistance to antimicrobial peptides, and adaptation to magnesium limitation. We can presume that PhoP is a global regulator that controls a complex regulatory cascade by a mechanism of not only directly controlling the expression of specific genes, but also indirectly regulating various cellular pathways by acting on a set of dedicated regulators. These results help us gain insights into the PhoP-dependent mechanisms by which Y. pestis survives the antibacterial strategies employed by host macrophages.

  6. Habitat evaluation for outbreak of Yangtze voles (Microtus fortis) and management implications.

    Science.gov (United States)

    Xu, Zhenggang; Zhao, Yunlin; Li, Bo; Zhang, Meiwen; Shen, Guo; Wang, Yong

    2015-05-01

    Rodent pests severely damage agricultural crops. Outbreak risk models of rodent pests often do not include sufficient information regarding geographic variation. Habitat plays an important role in rodent-pest outbreak risk, and more information about the relationship between habitat and crop protection is urgently needed. The goal of the present study was to provide an outbreak risk map for the Dongting Lake region and to understand the relationship between rodent-pest outbreak variation and habitat distribution. The main rodent pests in the Dongting Lake region are Yangtze voles (Microtus fortis). These pests cause massive damage in outbreak years, most notably in 2007. Habitat evaluation and ecological details were obtained by analyzing the correlation between habitat suitability and outbreak risk, as indicated by population density and historical events. For the source-sink population, 96.18% of Yangtze vole disaster regions were covered by a 10-km buffer zone of suitable habitat in 2007. Historical outbreak frequency and peak population density were significantly correlated with the proportion of land covered by suitable habitat (r = 0.68, P = 0.04 and r = 0.76, P = 0.03, respectively). The Yangtze vole population tends to migrate approximately 10 km in outbreak years. Here, we propose a practical method for habitat evaluation that can be used to create integrated pest management plans for rodent pests when combined with basic information on the biology, ecology and behavior of the target species. © 2014 International Society of Zoological Sciences, Institute of Zoology/Chinese Academy of Sciences and Wiley Publishing Asia Pty Ltd.

  7. Natural variation in early parental care correlates with social behaviors in adolescent prairie voles (Microtus ochrogaster

    Directory of Open Access Journals (Sweden)

    Allison M Perkeybile

    2013-03-01

    Full Text Available Natural variation in early parental care may contribute to long-term changes in behavior in the offspring. Here we investigate the role of variable early care in biparental prairie voles (Microtus ochrogaster. Total amounts of parental care were initially quantified for 24 breeder pairs and pairs were ranked in relation to one another based on total contact. Consistency in key components of care suggested a trait-like quality to parental care. Based on this ranking, breeder pairs from the top (high-contact and bottom (low-contact quartiles were selected to produce high- and low-contact offspring to investigate adolescent behavior after varying early care. Parental care of subject offspring was again observed postnatally. Offspring of high-contact parents spent more time passively nursing and received more paternal nonhuddling contact while low-contact offspring spent more time actively nursing and received more paternal huddling and pseudohuddling in the first postnatal days. Low-contact offspring also displayed faster rates of development on a number of physical markers. Post-weaning, offspring were evaluated on anxiety-like behavior, social behavior and pre-pulse inhibition to a tactile and an acoustic startle. High-contact offspring spent more time sniffing a juvenile and less time autogrooming. With an infant, high-contact offspring spent more time in nonhuddling contact and less time autogrooming and retrieving than did low-contact offspring. Considering sexes separately, high-contact females spent more time sniffing a novel juvenile than low-contact females. High-contact males spent more time in nonhuddling contact with an infant than low-contact males; while low-contact females retrieved infants more than high-contact females. In both measures of social behavior, high-contact males spent less time autogrooming than low-contact males. These results suggest a relationship between early-life care and differences in social behavior in

  8. Comparisons of methods for determining dominance rank in male and female prairie voles (Microtus ochrogastor)

    Science.gov (United States)

    Lanctot, Richard B.; Best, Louis B.

    2000-01-01

    Dominance ranks in male and female prairie voles (Microtus ochrogaster) were determined from 6 measurements that mimicked environmental situations that might be encountered by prairie voles in communal groups, including agonistic interactions resulting from competition for food and water and encounters in burrows. Male and female groups of 6 individuals each were tested against one another in pairwise encounters (i.e., dyads) for 5 of the measurements and together as a group in a 6th measurement. Two types of response variables, aggressive behaviors and possession time of a limiting resource, were collected during trials, and those data were used to determine cardinal ranks and principal component ranks for all animals within each group. Cardinal ranks and principal component ranks seldom yielded similar rankings for each animal across measurements. However, dominance measurements that were conducted in similar environmental contexts, regardless of the response variable recorded, ranked animals similarly. Our results suggest that individual dominance measurements assessed situation- or resource-specific responses. Our study demonstrates problems inherent in determining dominance rankings of individuals within groups, including choosing measurements, response variables, and statistical techniques. Researchers should avoid using a single measurement to represent social dominance until they have first demonstrated that a dominance relationship between 2 individuals has been learned (i.e., subsequent interactions show a reduced response rather than an escalation), that this relationship is relatively constant through time, and that the relationship is not context dependent. Such assessments of dominance status between all dyads then can be used to generate dominance rankings within social groups.

  9. The genus Bipolaris

    NARCIS (Netherlands)

    Manamgoda, D.S.; Rossman, A.Y.; Castlebury, L.A.; Crous, P.W.; Madrid, H.; Chukeatirote, E.; Hyde, K.D.

    2014-01-01

    The genus Bipolaris includes important plant pathogens with worldwide distribution. Species recognition in the genus has been uncertain due to the lack of molecular data from ex-type cultures as well as overlapping morphological characteristics. In this study, we revise the genus Bipolaris based on

  10. Identification of variables contributing to superovulation efficiency for production of transgenic prairie voles (Microtus ochrogaster

    Directory of Open Access Journals (Sweden)

    Keebaugh Alaine C

    2012-07-01

    Full Text Available Abstract Background The prairie vole (Microtus ochrogaster is an emerging animal model for biomedical research because of its rich sociobehavioral repertoire. Recently, lentiviral transgenic technology has been used to introduce the gene encoding the green fluorescent protein (GFP into the prairie vole germline. However, the efficiency of transgenesis in this species is limited by the inability to reliably produce large numbers of fertilized embryos. Here we examined several factors that may contribute to variability in superovulation success including, age and parentage of the female, and latency to mating after being placed with the male. Methods Females produced from 5 genetically distinct breeder lines were treated with 100 IU of pregnant mare serum gonadotrophin (PMSG and immediately housed with a male separated by a perforated Plexiglas divider. Ovulation was induced 72 hr later with 30 IU of human chorionic gonadotropin (hCG and 2 hrs later mating was allowed. Results Superovulation was most efficient in young females. For example, females aged 6-11 weeks produced more embryos (14 +/- 1.4 embryos as compared to females aged 12-20 weeks (4 +/- 1.6 embryos. Females aged 4-5 weeks did not produce embryos. Further, females that mated within 15 min of male exposure produced significantly more embryos than those that did not. Interestingly, there was a significant effect of parentage. For example, 12 out of 12 females from one breeder pair superovulated (defined as producing 5 or more embryos, while only 2 out of 10 females for other lines superovulated. Conclusions The results of this work suggest that age and genetic background of the female are the most important factors contributing to superovulation success and that latency to mating is a good predictor of the number of embryos to be recovered. Surprisingly we found that cohabitation with the male prior to mating is not necessary for the recovery of embryos but is necessary to recover

  11. Self-grooming induced by sexual chemical signals in male root voles (Microtus oeconomus Pallas).

    Science.gov (United States)

    Yu, Honghao; Yue, Pengpeng; Sun, Ping; Zhao, Xinquan

    2010-03-01

    Sniffing is one-way animals collect chemical signals, and many males self-groom when they encounter the odor of opposite-sex conspecifics. We tested the hypothesis that sexual chemical signals from females can induce self-grooming behavior in male root voles (Microtus oeconomus Pallas). Specifically, we investigated the sniffing pattern of male root voles in response to odors from the head, trunk, and tail areas of lactating and non-lactating females. The self-grooming behavior of males in response to female individual odorant stimuli was documented, and the relationship between self-grooming and sniffing of odors from the head, trunk, and tails areas were analyzed. Sniffing pattern results showed that males are most interested in odors from the head area, and more interested in odors from the tail as compared to the trunk area. Males displayed different sniffing and self-grooming behaviors when they were exposed to odors from lactating females as compared to non-lactating females. Males also spent more time sniffing and engaged in more sniffing behaviors in response to odors from the lactating females' tail area as compared to the same odors from non-lactating females. Similarly, males spent more time self-grooming and engaged in more self-grooming behaviors in the presence of individual odors from lactating females as compared to individual odors from non-lactating females. Partial correlation analyses revealed that the frequency of self-grooming was significantly correlated with the frequency of tail area sniffs. Results from this experiment suggest that sexual attractiveness of lactating females is stronger than that of non-lactating females. Furthermore, the partial correlation analysis demonstrated that self-grooming in males is induced by odors from the tail area of females. Collectively, these results support the hypothesis that sexual chemical signals from females can induce self-grooming behavior in male root voles. Self-grooming may also reflect the

  12. Genus four superstring measures

    OpenAIRE

    Cacciatori, Sergio L.; Piazza, Francesco Dalla; van Geemen, Bert

    2008-01-01

    A main issue in superstring theory are the superstring measures. D'Hoker and Phong showed that for genus two these reduce to measures on the moduli space of curves which are determined by modular forms of weight eight and the bosonic measure. They also suggested a generalisation to higher genus. We showed that their approach works, with a minor modification, in genus three and we announced a positive result also in genus four. Here we give the modular form in genus four explicitly. Recently S...

  13. Staphylococcus microti sp. nov., isolated from the common vole (Microtus arvalis)

    Czech Academy of Sciences Publication Activity Database

    Nováková, D.; Pantůček, R.; Hubálek, Zdeněk; Falsen, E.; Busse, H.-J.; Schumann, P.; Sedláček, I.

    2010-01-01

    Roč. 60, č. 3 (2010), s. 566-573 ISSN 1466-5026 Institutional research plan: CEZ:AV0Z60930519 Keywords : genus Staphylococcus * clinical specimens * lipid-composition * identification * skin * classification Subject RIV: EE - Microbiology, Virology Impact factor: 1.930, year: 2010

  14. Chromosomes of Peromyscus (Rodentia, Cricetidae). VI. The genomic size

    Energy Technology Data Exchange (ETDEWEB)

    Deaven, L.L. (Los Alamos Scientific Lab., NM); Vidal-Rioja, L.; Jett, J.H.; Hsu, T.C.

    1977-01-01

    In the genus Peromyscus cells of all species contain 48 chromosomes; however, the fundamental number varies from 56 (P. crinitus, P. boylei) to 96 (P. eremicus). In some cases biarmed chromosomes are the result of pericentric inversions, while in others they are the result of addition of large amounts of constitutive heterochromatin. Flow microfluorometric DNA-per-cell determinations demonstrated that in some species (P. eremicus) the genome is increased by 36% over the amount of DNA found in most mammalian species. Studies of unique karotypes with increased amounts of DNA added as constitutive heterochromatin may ultimately help in the elucidation of the mechanisms involved in karyotype evolution and speciation.

  15. The genus Bipolaris.

    Science.gov (United States)

    Manamgoda, D S; Rossman, A Y; Castlebury, L A; Crous, P W; Madrid, H; Chukeatirote, E; Hyde, K D

    2014-09-01

    The genus Bipolaris includes important plant pathogens with worldwide distribution. Species recognition in the genus has been uncertain due to the lack of molecular data from ex-type cultures as well as overlapping morphological characteristics. In this study, we revise the genus Bipolaris based on DNA sequence data derived from living cultures of fresh isolates, available ex-type cultures from worldwide collections and observation of type and additional specimens. Combined analyses of ITS, GPDH and TEF gene sequences were used to reconstruct the molecular phylogeny of the genus Bipolaris for species with living cultures. The GPDH gene is determined to be the best single marker for species of Bipolaris. Generic boundaries between Bipolaris and Curvularia are revised and presented in an updated combined ITS and GPDH phylogenetic tree. We accept 47 species in the genus Bipolaris and clarify the taxonomy, host associations, geographic distributions and species' synonymies. Modern descriptions and illustrations are provided for 38 species in the genus with notes provided for the other taxa when recent descriptions are available. Bipolaris cynodontis, B. oryzae, B. victoriae, B. yamadae and B. zeicola are epi- or neotypified and a lectotype is designated for B. stenospila. Excluded and doubtful species are listed with notes on taxonomy and phylogeny. Seven new combinations are introduced in the genus Curvularia to accomodate the species of Bipolaris transferred based on the phylogenetic analysis. A taxonomic key is provided for the morphological identification of species within the genus.

  16. The helminth parasites of two sympatric species of the genus Apodemus (Rodentia, Muridae) from south-eastern Slovakia

    Czech Academy of Sciences Publication Activity Database

    Ondríková, J.; Miklisová, D.; Ribas, Alexis; Stanko, M.

    2010-01-01

    Roč. 55, č. 4 (2010), s. 369-378 ISSN 1230-2821 Institutional research plan: CEZ:AV0Z60930519 Keywords : helminth community * rodents * south-eastern Slovakia Subject RIV: EG - Zoology Impact factor: 1.144, year: 2010

  17. [Chromosome arrangements and cytogenetic differentiation of two species of African mice of the genus Mus (Rodentia, Muridae)].

    Science.gov (United States)

    Aniskin, V M; Lavrenchenko, L A; Varshavskiĭ, A A; Milishnikov, A N

    1998-01-01

    Karyotypes of two African mouse species, Mus mahomet, 2n = 36, NFa = 34 (34A + XA + YA) and Mus sp. A, 2n = 34, NFa = 32 (32A + XA + YA), from five localities of the Bale Mountains National Park, Ethiopia, were analyzed. In both species all autosomes contained C-positive pericentromeric blocks. In M. mahomet, heterochromatin blocks of different chromosomes varied in size. In addition, the X chromosomes of both species contained a pericentromeric block and showed more intensive staining throughout the chromosome. The Y chromosome was two times larger in Mus sp. A than in M. mahomet and C-positive in both species. Comparative analysis of G-banding patterns revealed a similarity with respect to nine autosomes and the X chromosome. Autosome 1 of Mus sp. A was demonstrated to result from centromere-telomere fusion of two M. mahomet acrocentrics. The other five autosomes represent different linkage groups determining a specificity of the karyotypes. The karyotypes of M. mahomet and Mus sp. A were also compared with that of M. musculus. The evolution of M. mahomet and Mus sp. A karyotypes was shown to have involved structural rearrangements in 10 and 12 autosomes, respectively. The high karyological divergence confirmed molecular phylogenetic data. The cytogenetic differences T of M. musculus C from M. mahomet and Mus sp. A are high enough to different genera.

  18. Phylogeny and zoogeography of six squirrel species of the genus sciurus (mammalia, rodentia), inferred from cytochrome B gene sequences.

    Science.gov (United States)

    Oshida, T; Masuda, R

    2000-04-01

    To investigate the phylogenetic relationships between the New World Sciurus and the Old World Sciurus and their biogeographic history, the partial mitochondrial cytochrome b gene sequences (1,040 base pairs) were analyzed on six Sciurus species: S. aberti, S. carolinensis, S. lis, S. niger, S. stramineus, and S. vulgaris. Phylogenetic trees (maximum parsimony, neighbor-joining, and maximum likelihood methods) commonly showed two groups with high bootstrap values (73-100%): one consisting of the New World Sciurus and the other consisting of the Old World Sciurus. Genetic distances among the New World Sciurus species were remarkably larger than that between two Sciurus species of the Old World, suggesting the earlier radiation of the New World Sciurus than the Old World Sciurus.

  19. A geometric morphometric analysis of the shape of the first upper molar in mice of the genus Mus (Muridae, Rodentia)

    Czech Academy of Sciences Publication Activity Database

    Macholán, Miloš

    2006-01-01

    Roč. 270, č. 4 (2006), s. 672-681 ISSN 0952-8369 R&D Projects: GA AV ČR IAA6045307 Institutional research plan: CEZ:AV0Z50450515 Keywords : Mus * geometric morphometrics * thin-plate spline Subject RIV: EB - Genetics ; Molecular Biology Impact factor: 1.413, year: 2006

  20. Caracterización molecular de poblaciones venezolanas de Sigmodon hirsutus (Rodentia: Cricetidae

    Directory of Open Access Journals (Sweden)

    Janeth Lessmann

    2011-06-01

    Full Text Available Recientes estudios filogenéticos basados en la secuencia del gen del citocromo b, han determinado que la especie conocida históricamente como Sigmodon hispidus (Rodentia en Suramérica incluye una especie S. hirsutus de origen parafilético. El objetivo de este estudio fue probar la hipótesis de que las poblaciones de Venezuela, representan la forma sensu estricto, los haplotipos ancestrales y una subespecie monofilética. La metodología consistió en un análisis cladístico y cálculos de distancia genética, a partir de secuencias de citocromo b en 12 individuos de tres localidades en Venezuela que pertenecen a diferentes regiones biogeográficas, y a su vez compararlas con las dos secuencias disponibles en Genbank de especies del género Sigmodon. Los análisis filogenéticos indican que las tres poblaciones de S. hirustus de Venezuela forman un subclado ancestral y monofilético con el apoyo de valores de bootstrap altos y con significativa distancia genética, entre subclados dentro de S. hirsutus. La existencia de dos subclados dentro de S. hirsutus sugiere dos subespecies, S. hirsutus hirsutus en Venezuela y S. hirsutus mexicanus en México y Centroamérica. Sin embargo, ambas subespecies necesitan una descripción formal.Molecular characterization of Sigmodon hirsutus (Rodentia: Cricetidae populations in Venezuela. Recent phylogenetic studies based on cytochrome b gene sequence, have determined that the species historically known as Sigmodon hispidus (Rodentia from South America comprises a species S. hirsutus of paraphyletic origin. The aim of this study was to test the hypothesis that populations from Venezuela, represent the sensu strict form, ancestral haplotypes, and monophyletic subspecies. For this, 12 individual sequences from three localities of different biogeographic regions in Venezuela were evaluated and sequenced based on cyto b. Additionally, the sequences were used to develop a cladistic analysis and genetic distance

  1. Minimal genus one curves

    OpenAIRE

    Sadek, Mohammad

    2012-01-01

    In this paper we consider genus one equations of degree $n$, namely a (generalised) binary quartic when $n=2$, a ternary cubic when $n=3$, and a pair of quaternary quadrics when $n=4$. A new definition for the minimality of genus one equations of degree $n$ over local fields is introduced. The advantage of this definition is that it does not depend on invariant theory of genus one curves. We prove that this definition coincides with the classical definition of minimality for all $n\\le4$. As a...

  2. The genus Baijiania (Cucurbitaceae)

    NARCIS (Netherlands)

    Wilde, de W.J.J.O.; Duyfjes, B.E.E.

    2003-01-01

    The genus Baijiania, originally thought to be indigenous in China and Borneo, appears to be restricted to Borneo. The only species is Baijiania borneensis, with two varieties, the type variety and var. paludicola Duyfjes, var. nov.

  3. Mesoamerican tree squirrels evolution (Rodentia: Sciuridae): a molecular phylogenetic analysis.

    Science.gov (United States)

    Villalobos, Federico; Gutierrez-Espeleta, Gustavo

    2014-06-01

    The tribe Sciurini comprehends the genera Sciurus, Syntheosiurus, Microsciurus, Tamiasciurus and Rheinthrosciurus. The phylogenetic relationships within Sciurus have been only partially done, and the relationship between Mesoamerican species remains unsolved. The phylogenetic relationships of the Mesoamerican tree squirrels were examined using molecular data. Sequence data publicly available (12S, 16S, CYTB mitochondrial genes and IRBP nuclear gene) and cytochrome B gene sequences of four previously not sampled Mesoamerican Sciurus species were analyzed under a Bayesian multispecies coalescence model. Phylogenetic analysis of the multilocus data set showed the neotropical tree squirrels as a monophyletic clade. The genus Sciurus was paraphyletic due to the inclusion of Microsciurus species (M. alfari and M. flaviventer). The South American species S. aestuans and S. stramineus showed a sister taxa relationship. Single locus analysis based on the most compact and complete data set (i.e. CYTB gene sequences), supported the monophyly of the South American species and recovered a Mesoamerican clade including S. aureogaster, S. granatensis and S. variegatoides. These results corroborated previous findings based on cladistic analysis of cranial and post-cranial characters. Our data support a close relationship between Mesoamerican Sciurus species and a sister relationship with South American species, and corroborates previous findings in relation to the polyphyly of Microsciurus and Syntheosciurus paraphyly.

  4. Mesoamerican tree squirrels evolution (Rodentia: Sciuridae: a molecular phylogenetic analysis

    Directory of Open Access Journals (Sweden)

    Federico Villalobos

    2014-08-01

    Full Text Available The tribe Sciurini comprehends the genera Sciurus, Syntheosiurus, Microsciurus, Tamiasciurus and Rheinthrosciurus. The phylogenetic relationships within Sciurus have been only partially done, and the relationship between Mesoamerican species remains unsolved. The phylogenetic relationships of the Mesoamerican tree squirrels were examined using molecular data. Sequence data publicly available (12S, 16S, CYTB mitochondrial genes and IRBP nuclear gene and cytochrome B gene sequences of four previously not sampled Mesoamerican Sciurus species were analyzed under a Bayesian multispecies coalescence model. Phylogenetic analysis of the multilocus data set showed the neotropical tree squirrels as a monophyletic clade. The genus Sciurus was paraphyletic due to the inclusion of Microsciurus species (M. alfari and M. flaviventer. The South American species S. aestuans and S. stramineus showed a sister taxa relationship. Single locus analysis based on the most compact and complete data set (i.e. CYTB gene sequences, supported the monophyly of the South American species and recovered a Mesoamerican clade including S. aureogaster, S. granatensis and S. variegatoides. These results corroborated previous findings based on cladistic analysis of cranial and post-cranial characters. Our data support a close relationship between Mesoamerican Sciurus species and a sister relationship with South American species, and corroborates previous findings in relation to the polyphyly of Microsciurus and Syntheosciurus’ paraphyly. Rev. Biol. Trop. 62 (2: 649-657. Epub 2014 June 01.

  5. Identification of lymphocytic choriomeningitis mammarenavirus in house mouse (Mus musculus, Rodentia) in French Guiana.

    Science.gov (United States)

    Lavergne, Anne; de Thoisy, Benoît; Tirera, Sourakhata; Donato, Damien; Bouchier, Christiane; Catzeflis, François; Lacoste, Vincent

    2016-01-01

    Thirty-seven house mice (Mus musculus, Rodentia) caught in different localities in French Guiana were screened to investigate the presence of lymphocytic choriomeningitis mammarenavirus (LCMV). Two animals trapped in an urban area were found positive, hosting a new strain of LCMV, that we tentatively named LCMV "Comou". The complete sequence was determined using a metagenomic approach. Phylogenetic analyses revealed that this strain is related to genetic lineage I composed of strains inducing severe disease in humans. These results emphasize the need for active surveillance in humans as well as in house mouse populations, which is a rather common rodent in French Guianese cities and settlements. Copyright © 2015 The Authors. Published by Elsevier B.V. All rights reserved.

  6. Relaciones competitivas entre Proechimys Semispinosus y Hoplomys Gymnurus (Rodentia: Echimyidae en el occidente colombiano

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    Alberico Michael

    1993-12-01

    Full Text Available Comparative data about movements, density, home range, and reproductive activity of Proechimys semispinosus and Hoplomys gymnurus (Rodentia: Echimyidae were obtained by means of an eight-month capture-recapture study in the Bajo Calima region of the pacific coast of Colombia. In addition, intra and interespecific behavioral interactions were studied in captivity. Hoplomys gymnurus had a higher density than Proechimys semispinosus in the primary forest habitat, while the reverse situation was found in the secondary forest. The behavior of Proechimys semispinosuswas more agresive than that of Hoplomys gymnurus. In interespecific encounters, individuals of the former species showed a marked dominance and the latter always showed a submissive behavior.We propose that interference competition is minimized by means of microhabitat selection; Hoplomys gymnurus occurs preferentialiy in primary forest and Proechimys semispinosus in secondary forest in this region.Por medio de un estudio ecológico de marcaje y recaptura durante ocho meses, en la zona de Bajo Calima en la costa pacífica de Colombia, se obtuvieron datos sobre movimientos, rango vital, densidad y actividad reproductiva de Proechimys semispinosus y Hoplomys gymnurus (Rodentia: Echimyidae. Adicionalmente, se hicieron observaciones sobre el comportamiento intra e interespecífico en condiciones de cautiverio. En el bosque primario, la densidad de Hoplomys gymnurus fue superior a la de Proechimys semispinosus, mientras que en el bosque secundario, se encontró la situación opuesta. En su comportamiento la segunda especie fue más agresiva que la primera. En encuentros interespecíficos, sus individuos se caracterizaron por una marcada dominancia y los de Hoplomys gymnurus siempre terminaron exhibiendo un comportamiento sumiso. Se propone que la competencia por encuentros se reduce mediante la selección del microhábitat; Hoplomys gymnurus ocupa preferencialmenteel bosque primario y

  7. Morphological and morphometric characterization of the new records of the East European vole (Microtus levis Miller, 1908 from northeast Iran

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    Fatemeh Ghorbani

    2015-09-01

    Full Text Available Thirteen specimens of Microtus levis were collected from Golestan province, northeast Iran. The specimens were studied based on their external characters, skull and dental morphology, and specially karyology. Specimens of M. levis from the northeast of Iran were also compared with other species of the arvalis group from Iran and specimens of M. levis from Turkey. The specimens demonstrated that 2n=54 and fundamental number FN=54. The karyological results were similar between specimens from northeast Iran and those from Turkey, but they were different from specimens of Europe. In addition, the morphometric characters of M. levis, including head and body length (mean=105.77±7.53, length of condylobasal (mean=24.96±0.97, length of bullae (mean=6.57±0.34, and dental characters consisting of maxillary tooth row (mean=6.17±0.25 and mandibular tooth row (mean=5.60±0.33, were different from those of other species of the arvalis group.

  8. Influence of global atmospheric change on the feeding behavior and growth performance of a mammalian herbivore, Microtus ochrogaster.

    Directory of Open Access Journals (Sweden)

    Christopher W Habeck

    Full Text Available Global atmospheric change is influencing the quality of plants as a resource for herbivores. We investigated the impacts of elevated carbon dioxide (CO2 and ozone (O3 on the phytochemistry of two forbs, Solidago canadensis and Taraxacum officinale, and the subsequent feeding behavior and growth performance of weanling prairie voles (Microtus ochrogaster feeding on those plants. Plants for the chemical analyses and feeding trials were harvested from the understory of control (ambient air, elevated CO2 (560 µl CO2 l(-1, and elevated O3 (ambient × 1.5 rings at the Aspen FACE (Free Air CO2 Enrichment site near Rhinelander, Wisconsin. We assigned individual voles to receive plants from only one FACE ring and recorded plant consumption and weanling body mass for seven days. Elevated CO2 and O3 altered the foliar chemistry of both forbs, but only female weanling voles on the O3 diet showed negative responses to these changes. Elevated CO2 increased the fiber fractions of both plant species, whereas O3 fumigation elicited strong responses among many phytochemical components, most notably increasing the carbon-to-nitrogen ratio by 40% and decreasing N by 26%. Consumption did not differ between plant species or among fumigation treatments. Male voles were unaffected by the fumigation treatments, whereas female voles grew 36% less than controls when fed O3-grown plants. These results demonstrate that global atmospheric change has the potential to affect the performance of a mammalian herbivore through changes in plant chemistry.

  9. Influence of global atmospheric change on the feeding behavior and growth performance of a mammalian herbivore, Microtus ochrogaster.

    Science.gov (United States)

    Habeck, Christopher W; Lindroth, Richard L

    2013-01-01

    Global atmospheric change is influencing the quality of plants as a resource for herbivores. We investigated the impacts of elevated carbon dioxide (CO2) and ozone (O3) on the phytochemistry of two forbs, Solidago canadensis and Taraxacum officinale, and the subsequent feeding behavior and growth performance of weanling prairie voles (Microtus ochrogaster) feeding on those plants. Plants for the chemical analyses and feeding trials were harvested from the understory of control (ambient air), elevated CO2 (560 µl CO2 l(-1)), and elevated O3 (ambient × 1.5) rings at the Aspen FACE (Free Air CO2 Enrichment) site near Rhinelander, Wisconsin. We assigned individual voles to receive plants from only one FACE ring and recorded plant consumption and weanling body mass for seven days. Elevated CO2 and O3 altered the foliar chemistry of both forbs, but only female weanling voles on the O3 diet showed negative responses to these changes. Elevated CO2 increased the fiber fractions of both plant species, whereas O3 fumigation elicited strong responses among many phytochemical components, most notably increasing the carbon-to-nitrogen ratio by 40% and decreasing N by 26%. Consumption did not differ between plant species or among fumigation treatments. Male voles were unaffected by the fumigation treatments, whereas female voles grew 36% less than controls when fed O3-grown plants. These results demonstrate that global atmospheric change has the potential to affect the performance of a mammalian herbivore through changes in plant chemistry.

  10. Ignoring heterozygous sites biases phylogenomic estimates of divergence times: implications for the evolutionary history of microtus voles.

    Science.gov (United States)

    Lischer, Heidi E L; Excoffier, Laurent; Heckel, Gerald

    2014-04-01

    Phylogenetic reconstruction of the evolutionary history of closely related organisms may be difficult because of the presence of unsorted lineages and of a relatively high proportion of heterozygous sites that are usually not handled well by phylogenetic programs. Genomic data may provide enough fixed polymorphisms to resolve phylogenetic trees, but the diploid nature of sequence data remains analytically challenging. Here, we performed a phylogenomic reconstruction of the evolutionary history of the common vole (Microtus arvalis) with a focus on the influence of heterozygosity on the estimation of intraspecific divergence times. We used genome-wide sequence information from 15 voles distributed across the European range. We provide a novel approach to integrate heterozygous information in existing phylogenetic programs by repeated random haplotype sampling from sequences with multiple unphased heterozygous sites. We evaluated the impact of the use of full, partial, or no heterozygous information for tree reconstructions on divergence time estimates. All results consistently showed four deep and strongly supported evolutionary lineages in the vole data. These lineages undergoing divergence processes split only at the end or after the last glacial maximum based on calibration with radiocarbon-dated paleontological material. However, the incorporation of information from heterozygous sites had a significant impact on absolute and relative branch length estimations. Ignoring heterozygous information led to an overestimation of divergence times between the evolutionary lineages of M. arvalis. We conclude that the exclusion of heterozygous sites from evolutionary analyses may cause biased and misleading divergence time estimates in closely related taxa.

  11. The small mammals (Eulipotyphla, Chiroptera, Rodentia and Lagomorpha from the Late Pleistocene site of the cave of El Castillo (Cantabria, Spain

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    C. Sesé

    2018-01-01

    Full Text Available The micromammals remains from the Late Pleistocene site of the cave of El Castillo studied here in detail, came from the Aurignacian levels 18b and 18c (dated in 40.000-45.000 BP, level 19, and the Musterian levels 20b, 20c, 20d, 20e (dated in 41.000-49.000 BP, 21a and 21b. The micromammal association is the following: Erinaceus europaeus, Crocidura russula, Sorex coronatus, Sorex minutus, Neomys fodiens, Talpa europaea, Galemys pyrenaicus, cf. Miniopterus schreibersii, Chiroptera indet., Pliomys lenki, Microtus arvalis – Microtus agrestis, Microtus lusitanicus, Microtus oeconomus, Chionomys nivalis, Arvicola terrestris, Apodemus sylvaticus – Apodemus flavicollis and Lepus sp. Most of these species are in the present fauna of Cantabria, except Pliomys lenki that got extinct in the last third of the Upper Pleistocene, and Microtus oeconomus that disappeared from the Iberian Peninsula during the Holocene, in historical times, and is nowadays present in northern Euroasiatic regions. There is a great continuity of most of the taxa in all the levels. The faunal association seems to indicate a mainly open environment, in general with wet meadows (and few dry meadows, with good vegetation cover in the soil, with perhaps also some tree-covered areas, and some watercourses. The thermophiles indicators are very scarce, which could indicate that the climate could be a lesser temperate than other Upper Pleistocene periods and the present-day climate in the area.

  12. The nexus of hair corticosterone level, immunocompetence, metabolic rates and overwinter survival in the root vole, Microtus oeconomus.

    Science.gov (United States)

    Książek, Aneta; Zub, Karol; Szafrańska, Paulina A; Wieczorek, Monika; Konarzewski, Marek

    2017-09-01

    Although corticosterone (CORT) regulates many physiological mechanisms, the associations between CORT levels, immunocompetence, energy expenditures and overwinter survival have not been examined. Here, we studied individual variation in CORT level extracted from hair, immunocompetence quantified as the neutrophil-to-lymphocyte (N/L) ratio, total white blood cells (WBC) and natural antibody levels (NAbs), along with the resting (RMR) and peak metabolic rates (PMR) and mortality during three consecutive winter seasons in a natural population of the root vole, Microtus oeconomus. In early winter, hair CORT level was strongly positively associated with body mass and inversely related to voles' ability to survive. We suggest that the observed association between hair CORT level and body mass may be the key component of the physiological nexus driving the survivorship of individual rodents. Additionally, hair CORT was a significant predictor of variation of the whole body RMR, which in turn enhanced overwinter survival in the studied population. On the other hand, hair CORT was not significantly associated with changes in the blood indices. Interestingly, the analysis carried out only during the first year of study (2008), which was characterized by a high population density and prevalence of infestation with a blood protozoan, Babesia spp., showed that the intensity of the infestation was negatively correlated with both the hair CORT level and the N/L ratio. Because CORT is often considered immunosuppressive, we expected a positive association between its level and the N/L ratio. However, hair CORT did not significantly correlate with the N/L ratio. We suggest that the lack of an association between hair CORT and the N/L ratio resulted from a small inter-individual variation in the N/L ratio in 2008, which was much higher and less variable than in the other years of our study. Copyright © 2017 Elsevier Inc. All rights reserved.

  13. In vitro culture and in vitro fertilization techniques for prairie voles (Microtus ochrogaster).

    Science.gov (United States)

    Horie, Kengo; Hidema, Shizu; Hirayama, Takashi; Nishimori, Katsuhiko

    2015-08-07

    Prairie vole (Microtus ochrogaster) is a highly social animal and is a commonly used animal model for neuropsychopharmacological and psychiatric studies. To date, only a few reports on the development of transgenic prairie voles which was primarily due to the suboptimal development of assisted reproductive technology (ART) in prairie voles. Limitations in ART further hinder the development of genetically modified prairie voles such as the application of conventional gene targeting technologies using embryonic stem (ES) or induced pluripotent stem (iPS) cells to generate chimeric prairie voles. Moreover, recent advancement in genome-editing tools such as transcription activator-like effector nuclease (TALEN) and clustered regulatory interspaced short palindromic repeat (CRISPR)/Cas technology provide an unprecedented opportunity to create gene targeting animal model and the development of ART in prairie voles is necessary for future development of novel transgenic prairie vole model. We have established efficient method for in vitro embryo culture and sperm cryopreservation with high fertilization rate. In G-1 PLUS and G-2 PLUS sequential culture condition, 81.0% (# of Blastocysts/total n) of one-cell embryos developed to blastocysts. In contrary, no embryos were developed to blastocyst stage in KSOM medium (0/total # of embryos in culture). In vitro fertilization rate using fresh and frozen-thawed sperm was 32.6% and 29.3%, respectively. This is the first report of IVF using cryopreserved prairie vole sperm. We employed mouse IVF methods in prairie voles and optimize culture conditions using human G-1/G-2 PLUS sequential culture method that resulted in high embryonic development rate. The development in vole reproductive technology will facilitate the generation of transgenic voles in the future. Copyright © 2015 Elsevier Inc. All rights reserved.

  14. A novel model for neuroendocrine toxicology: neurobehavioral effects of BPA exposure in a prosocial species, the prairie vole (Microtus ochrogaster).

    Science.gov (United States)

    Sullivan, Alana W; Beach, Elsworth C; Stetzik, Lucas A; Perry, Amy; D'Addezio, Alyssa S; Cushing, Bruce S; Patisaul, Heather B

    2014-10-01

    Impacts on brain and behavior have been reported in laboratory rodents after developmental exposure to bisphenol A (BPA), raising concerns about possible human effects. Epidemiological data suggest links between prenatal BPA exposure and altered affective behaviors in children, but potential mechanisms are unclear. Disruption of mesolimbic oxytocin (OT)/vasopressin (AVP) pathways have been proposed, but supporting evidence is minimal. To address these data gaps, we employed a novel animal model for neuroendocrine toxicology: the prairie vole (Microtus ochrogaster), which are more prosocial than lab rats or mice. Male and female prairie vole pups were orally exposed to 5-μg/kg body weight (bw)/d, 50-μg/kg bw/d, or 50-mg/kg bw/d BPA or vehicle over postnatal days 8-14. Subjects were tested as juveniles in open field and novel social tests and for partner preference as adults. Brains were then collected and assessed for immunoreactive (ir) tyrosine hydroxylase (TH) (a dopamine marker) neurons in the principal bed nucleus of the stria terminalis (pBNST) and TH-ir, OT-ir, and AVP-ir neurons in the paraventricular nucleus of the hypothalamus (PVN). Female open field activity indicated hyperactivity at the lowest dose and anxiety at the highest dose. Effects on social interactions were also observed, and partner preference formation was mildly inhibited at all dose levels. BPA masculinized principal bed nucleus of the stria terminalis TH-ir neuron numbers in females. Additionally, 50-mg/kg bw BPA-exposed females had more AVP-ir neurons in the anterior PVN and fewer OT-ir neurons in the posterior PVN. At the 2 lowest doses, BPA eliminated sex differences in PVN TH-ir neuron numbers and reversed this sex difference at the highest dose. Minimal behavioral effects were observed in BPA-exposed males. These data support the hypothesis that BPA alters affective behaviors, potentially via disruption of OT/AVP pathways.

  15. Individual differences in cortical connections of somatosensory cortex are associated with parental rearing style in prairie voles (Microtus ochrogaster).

    Science.gov (United States)

    Seelke, Adele M H; Perkeybile, Allison M; Grunewald, Rebecca; Bales, Karen L; Krubitzer, Leah A

    2016-02-15

    Early-life sensory experiences have a profound effect on brain organization, connectivity, and subsequent behavior. In most mammals, the earliest sensory inputs are delivered to the developing brain through tactile contact with the parents, especially the mother. Prairie voles (Microtus ochrogaster) are monogamous and, like humans, are biparental. Within the normal prairie vole population, both the type and the amount of interactions, particularly tactile contact, that parents have with their offspring vary. The question is whether these early and pervasive differences in tactile stimulation and social experience between parent and offspring are manifest in differences in cortical organization and connectivity. To address this question, we examined the cortical and callosal connections of the primary somatosensory area (S1) in high-contact (HC) and low-contact (LC) offspring using neuroanatomical tracing techniques. Injection sites within S1 were matched so that direct comparisons between these two groups could be made. We observed several important differences between these groups. The first was that HC offspring had a greater density of intrinsic connections within S1 compared with LC offspring. Additionally, HC offspring had a more restricted pattern of ipsilateral connections, whereas LC offspring had dense connections with areas of parietal and frontal cortex that were more widespread. Finally, LC offspring had a broader distribution of callosal connections than HC offspring and a significantly higher percentage of labeled callosal neurons. This study is the first to examine individual differences in cortical connections and suggests that individual differences in cortical connections may be related to natural differences in parental rearing styles associated with tactile contact. © 2015 Wiley Periodicals, Inc.

  16. The cyanobacterial genus Macrospermum

    Czech Academy of Sciences Publication Activity Database

    Komárek, Jiří

    2008-01-01

    Roč. 8, č. 1 (2008), s. 79-86 ISSN 1802-5439 R&D Projects: GA AV ČR IAA600050704 Institutional research plan: CEZ:AV0Z60050516 Keywords : cyanobacteria * taxonomy * pantropical genus Subject RIV: EF - Botanics

  17. Genus I. Leptospira

    Science.gov (United States)

    Leptospira comprise a diverse group of bacteria. Some species cause serious infections in animals and humans. These bacteria are aerobes that consume long-chain fatty acids and alcohols as carbon and energy sources. This genus is distinguished from Leptonema or Turneriella by lack of similarity u...

  18. The genus Lagenophora (Compositae)

    NARCIS (Netherlands)

    Cabrera, Angel L.

    1966-01-01

    The genus Lagenophora was first described by Cassini under the name Lagenifera (in Bull. Soc. Philomat. 12, 1816, 199) with the following diagnosis: ‘Ce genre, de la tribus des astérées, comprend le calendula magellanicá, Willd. et le bellis stipitata, Labill. Son principal caractère reside dans la

  19. The amphipod genus Acidostoma

    NARCIS (Netherlands)

    Dahl, E.

    1964-01-01

    The genus Acidostoma was established by Lilljeborg (1865, p. 24) to receive Anonyx obesus Sp. Bate (1862, p. 74). Afterwards two further species have been added, viz. A. laticorne G. O. Sars (1879, p. 440) and A. nodiferum Stephensen (1923, p. 40). In the present paper it will be shown that A.

  20. Genus g temperature string theory

    International Nuclear Information System (INIS)

    Murphy, P.; Sen, S.

    1989-01-01

    The geometric approach to bosonic temperature string theory for genus g is formulated in the operator approach of Vafa. It is shown that the Hagedorn temperature exists for all genus g and a conjectured genus g expression for superstring theories with temperature is constructed. (orig.)

  1. Sibling vole species (Microtus in the fragmented landscape of south-eastern part of Thrace, Balkan Peninsula: species presence, habitat selection and craniometry

    Directory of Open Access Journals (Sweden)

    GEORGI MARKOV

    2014-04-01

    Full Text Available The presence of sibling vole species (Microtus in the most common forests and open landscapes in south-eastern part of Thrace (Balkan Peninsula of contemporary territories of Bulgaria and Turkey was studied. Only the southern vole (Microtus levis was found in the investigated region. In his northern part, the Southern vole is associated with semi dry, upland habitats such as deserted and overgrown with wild vegetation vines near sparse forests and large agricultural fields under autumn crops with adjacent non-arable lands with shrub vegetation. In the southern part, it is presented in open landscape related to water areas (meadows near rivers and wetlands. On the basis of trapping the Southern vole is a common species in the north part of Strandzha region. The established craniological characteristics of the Southern vole from investigated region, which can be considered as a zoogeographical crossroads, with a late Pleistocene connection between the Balkan Peninsula and the mammalian fauna of Anatolian peninsula, enriched the knowledge about its craniological variation in Europe.

  2. What is the genus?

    CERN Document Server

    Popescu-Pampu, Patrick

    2016-01-01

    Exploring several of the evolutionary branches of the mathematical notion of genus, this book traces the idea from its prehistory in problems of integration, through algebraic curves and their associated Riemann surfaces, into algebraic surfaces, and finally into higher dimensions. Its importance in analysis, algebraic geometry, number theory and topology is emphasized through many theorems. Almost every chapter is organized around excerpts from a research paper in which a new perspective was brought on the genus or on one of the objects to which this notion applies. The author was motivated by the belief that a subject may best be understood and communicated by studying its broad lines of development, feeling the way one arrives at the definitions of its fundamental notions, and appreciating the amount of effort spent in order to explore its phenomena.

  3. Spiky higher genus strings

    International Nuclear Information System (INIS)

    Ambjoern, J.; Bellini, A.; Johnston, D.

    1990-10-01

    It is clear from both the non-perturbative and perturbative approaches to two-dimensional quantum gravity that a new strong coupling regime is setting in at d=1, independent of the genus of the worldsheet being considered. It has been suggested that a Kosterlitz-Thouless (KT) phase transition in the Liouville theory is the cause of this behaviour. However, it has recently been pointed out that the XY model, which displays a KT transition on the plane and the sphere, is always in the strong coupling, disordered phase on a surface of constant negative curvature. A higher genus worldsheet can be represented as a fundamental region on just such a surface, which might seem to suggest that the KT picture predicts a strong coupling region for arbitrary d, contradicting the known results. We resolve the apparent paradox. (orig.)

  4. Spiky higher genus strings

    International Nuclear Information System (INIS)

    Ambjorn, J.; Bellini, A.; Johnston, D.

    1991-01-01

    This paper reports that it is clear from both the non-perturbative and perturbative approaches to two-dimensional quantum gravity that a new strong coupling regime is setting in at d = 1, independent of the genus of the worldsheet being considered. It has been suggested that a Kosterlitz-Thouless (KT) phase transition in the Liouville theory is the cause of this behavior. However, it has recently been pointed out that the XY-model, which displays a KT transition on the plane and the sphere, is always in the strong coupling, disordered phase on a surface of constant negative curvature. A higher genus worldsheet can be represented as a fundamental region on just such a surface, which might seem to suggest that the KT picture predicts a strong coupling region for arbitrary d, contradicting the known results. The authors resolve the apparent paradox

  5. Genus Ranges of Chord Diagrams.

    Science.gov (United States)

    Burns, Jonathan; Jonoska, Nataša; Saito, Masahico

    2015-04-01

    A chord diagram consists of a circle, called the backbone, with line segments, called chords, whose endpoints are attached to distinct points on the circle. The genus of a chord diagram is the genus of the orientable surface obtained by thickening the backbone to an annulus and attaching bands to the inner boundary circle at the ends of each chord. Variations of this construction are considered here, where bands are possibly attached to the outer boundary circle of the annulus. The genus range of a chord diagram is the genus values over all such variations of surfaces thus obtained from a given chord diagram. Genus ranges of chord diagrams for a fixed number of chords are studied. Integer intervals that can be, and those that cannot be, realized as genus ranges are investigated. Computer calculations are presented, and play a key role in discovering and proving the properties of genus ranges.

  6. Paternal behavior and testosterone plasma levels in the Volcano Mouse Neotomodon alstoni (Rodentia: Muridae).

    Science.gov (United States)

    Luis, Juana; Ramírez, Lorena; Carmona, Agustín; Ortiz, Guadalupe; Delgado, Jesús; Cárdenas, René

    2009-01-01

    Paternal behavior and testosterone plasma levels in the Volcano Mouse Neotomodon alstoni (Rodentia: Muridae). Although initially it was thought that testosterone inhibited the display of paternal behavior in males of rodents, it has been shown that in some species high testosterone levels are needed for exhibition of paternal care. In captivity, males of Volcano Mouse (Neotomodon alstoni) provide pups the same care provided by the mother, with the exception of suckling. Here we measured plasmatic testosterone concentrations 10 days after mating, five and 20 days postpartum, and 10 days after males were isolated from their families in order to determine possible changes in this hormone, associated to the presence and age of pups. Males of Volcano Mouse exhibited paternal behavior when their testosterone levels were relatively high. Although levels of this hormone did not change with the presence or pups age, males that invested more time in huddling showed higher testosterone levels. It is possible that in the Volcano Mouse testosterone modulates paternal behavior indirectly, as in the California mouse.

  7. Description of the karyotype of Rhagomys rufescens Thomas, 1886 (Rodentia, Sigmodontinae from Southern Brazil Atlantic forest

    Directory of Open Access Journals (Sweden)

    André Filipe Testoni

    2010-01-01

    Full Text Available Rhagomys rufescens (Rodentia: Sigmodontinae is an endemic species of the Atlantic forest from Southern and Southeastern Brazil. Some authors consider Rhagomys as part of the tribe Thomasomyini; but its phylogenetic relationships remain unclear. Chromosomal studies on eight specimens of Rhagomys rufescens revealed a diploid number of 2n = 36 and a number of autosome arms FN = 50. GTG, CBG and Ag-NOR banding and CMA3/DAPI staining were performed on metaphase chromosomes. Eight biarmed and nine acrocentric pairs were found in the karyotype of this species. The X and Y chromosomes were both acrocentric. Most of the autosomes and the sex chromosomes showed positive C-bands in the pericentromeric region. The X chromosome showed an additional heterochromatic block in the proximal region of the long arm. Nucleolus organizer regions (NORs were located in the pericentromeric region of three biarmed autosomes (pairs 4, 6 and 8 and in the telomeric region of the short arm of three acrocentrics (pairs 10, 12 and 17. CMA3/DAPI staining produced fluorescent signals in many autosomes, especially in pairs 4, 6, and 8. This study presents cytogenetic data of Rhagomys rufescens for the first time.

  8. Caracterización molecular de poblaciones venezolanas de Sigmodon hirsutus (Rodentia: Cricetidae

    Directory of Open Access Journals (Sweden)

    Janeth Lessmann

    2011-06-01

    Full Text Available Recientes estudios filogenéticos basados en la secuencia del gen del citocromo b, han determinado que la especie conocida históricamente como Sigmodon hispidus (Rodentia en Suramérica incluye una especie S. hirsutus de origen parafilético. El objetivo de este estudio fue probar la hipótesis de que las poblaciones de Venezuela, representan la forma sensu estricto, los haplotipos ancestrales y una subespecie monofilética. La metodología consistió en un análisis cladístico y cálculos de distancia genética, a partir de secuencias de citocromo b en 12 individuos de tres localidades en Venezuela que pertenecen a diferentes regiones biogeográficas, y a su vez compararlas con las dos secuencias disponibles en Genbank de especies del género Sigmodon. Los análisis filogenéticos indican que las tres poblaciones de S. hirustus de Venezuela forman un subclado ancestral y monofilético con el apoyo de valores de bootstrap altos y con significativa distancia genética, entre subclados dentro de S. hirsutus. La existencia de dos subclados dentro de S. hirsutus sugiere dos subespecies, S. hirsutus hirsutus en Venezuela y S. hirsutus mexicanus en México y Centroamérica. Sin embargo, ambas subespecies necesitan una descripción formal.

  9. Hidden heterochromatin: characterization in the Rodentia species Cricetus cricetus, Peromyscus eremicus (Cricetidae and Praomys tullbergi (Muridae

    Directory of Open Access Journals (Sweden)

    Ana Paço

    2009-01-01

    Full Text Available The use of in situ restriction endonuclease (RE (which cleaves DNA at specific sequences digestion has proven to be a useful technique in improving the dissection of constitutive heterochromatin (CH, and in the understanding of the CH evolution in different genomes. In the present work we describe in detail the CH of the three Rodentia species, Cricetus cricetus, Peromyscus eremicus (family Cricetidae and Praomys tullbergi (family Muridae using a panel of seven REs followed by C-banding. Comparison of the amount, distribution and molecular nature of C-positive heterochromatin revealed molecular heterogeneity in the heterochromatin of the three species. The large number of subclasses of CH identified in Praomys tullbergi chromosomes indicated that the karyotype of this species is the more derived when compared with the other two genomes analyzed, probably originated by a great number of complex chromosomal rearrangements. The high level of sequence heterogeneity identified in the CH of the three genomes suggests the coexistence of different satellite DNA families, or variants of these families in these genomes.

  10. Blood and intestinal parasites of squirrels (Rodentia: Sciuridae in Amazonian Brazil

    Directory of Open Access Journals (Sweden)

    Ralph Lainson

    2004-10-01

    Full Text Available We report the result of an examination for blood and intestinal protozoa in 12 specimens of the red squirrel Sciurus spadiceus (Rodentia: Sciuridae from Birroque, municipality of Plácido de Castro, state of Acre, Brazil. No parasites were detected in thin, Giemsa-stained blood films of the animals, but culture of the blood of three in Difco B45 medium blood-agar slants gave rise to isolates of epimastigotes. Inoculation of one isolate into laboratory mice resulted in the appearance of Trypanosoma cruzi-like trypomastigotes in their peripheral blood, and the other two isolates gave rise to transient infections with a T. lewisi-like parasite in inoculated mice and hamsters. The failure of the latter parasite to develop in the triatomine bug Rhodnius robustus suggests that it is probably not T. rangeli. This appears to be the first record of a T. lewisi-like trypanosome in neotropical squirrels. Oocysts of an Eimeria sp., were detected in the faeces of 10 animals (83.3%. The parasite develops in the epithelial cells of the intestine, where it may cause severe damage and sometimes results in death of the animal. No oocysts were detected in bile.

  11. Sigmodontinae, Rodentia

    Indian Academy of Sciences (India)

    Material and methods. Karyotype analysis. We karyotyped six specimens of O. paricola (table 2), of which four were collected in the Environmental Park in. Belém (01. ◦. 27 S, 48 ... tic tapes, and with conventional traps including the Sherman trap and cages on ... of the occlusal surface of the superior molars. These classes,.

  12. RODENTIA: MURIDAE

    African Journals Online (AJOL)

    of the nest box and was often accompanied by a yawn or by licking the wall of the nest box. Stretching usually occurred on entering the nest box, with the adult moving from one corner to the next, stretching in all four corners. This is contrary to the situation found in. Gerbillurus (Stutterheim & Skinner 1973) where stretching ...

  13. (RODENTIA: SCIURIDAE).

    African Journals Online (AJOL)

    to analysis the volume of the contents of these 22 stomachs was recorded by water. TABLE I. Sample sizes of bush squirrels, P.c.cepapi, collected from different localities in the Transvaal during 1973/14. Locality. Sample size. Adults. Naboomspruit. 28°47'E/ 24° 35'S. 47. 33. Messina, on Limpopo River. 30° 35'E/ 22° 20'S.

  14. rodentia: sciuridae

    African Journals Online (AJOL)

    it is apparently not an efficient vector of plague. Sucking lice. The sucking louse, Neohoematopinw heliosciuri has been found on the African tree squinels. Heliosciurus rufobrachium. Funisciurus anerythrus and Paraxerus boehmi em;"i by Rahm (19~2). and. Ledger (1976) additionally records these lice from. Paraxerus ...

  15. (RODENTIA: SCIURIDAE).

    African Journals Online (AJOL)

    DOBRORUKA, L J 1970. Behaviour in the bush squirrel, Paraxerus cepapi (A Smith, 1836). Revue Zoo I. Bot. afro 82: 131-141. GUNTER, G cl ELEUTERIUS, L 1971. Bark-eating by the common gray squirrel following a hurricane. Am. Midi. Nat. 85:23S. NIXON, C M 1970. Insects as food for juvenile gray squirrels. Am. Midi.

  16. RODENTIA: MURIDAE

    African Journals Online (AJOL)

    sparsely distributed. asocial and nocturnal. and probably utilizes burrows of other rodents although it can dig well. It has a wide food spectrum ranging from seeds to .... indicate that individuals are widely spaced, and so far two animals have only been caught once at the same trap station during a particular trapping period.

  17. Chemistry of the Genus Plectranthus

    OpenAIRE

    S. M. Batterjee; H. A. Albar; M. Abdel-Mogib

    2002-01-01

    This review presents the phytochemical constituents of the genus Plectranthus reported up to 1999. Only a tetrameric derivative of caffeic acid was isolated from P. japonicus, but a group of long-chain alkylphenols, of possible taxonomic significance in the genus, was also isolated. As a genus of the subfamily Nepetoideae, Plectranthus is free from iridoid glycosides and rich in essential oil (i.e. > 0.5% volatile oil on a dry weight basis). Diterpenoids are the more common secondary metaboli...

  18. Las especies del género Gyropus Nitzsch, 1818 (Phthiraptera: Gyropidae parásitas de Octodontidae (Mammalia: Rodentia The species of the genus Gyropus Nitzch, 1818 (Phthiraptera: Gyropidae parasitic on the Octodontidae (Mammalia: Rodentia

    Directory of Open Access Journals (Sweden)

    DOLORES DEL CARMEN CASTRO

    2002-06-01

    Full Text Available Este trabajo tiene por finalidad otorgar status específico pleno a la subespecie Gyropus parvus elongatus Castro, Cicchino & Torres-Mura, 1987, describir la nueva especie Gyropus distinctus a partir de materiales recolectados sobre Octodon degus (Molina, 1782 y Octodon lunatus Osgood, 1943 procedentes del centro de Chile y, finalmente, ofrecer un análisis de las posibles razones de la distribución geográfica y del rango de hospedadores conocidos para estas tres especiesThe purpose of this paper is to give full specific status to the subspecies Gyropus parvus elongatus Castro, Cicchino & Torres-Mura, 1987, to describe the new species Gyropus distinctus collected in Octodon degus and O. lunatus from central Chile, along with an analysis of the possible causes than could explain their geographic and host range distributions known to date for these three species

  19. Review: Fitokimia genus Baccaurea spp.

    Directory of Open Access Journals (Sweden)

    Gunawan Gunawan

    2016-09-01

    Full Text Available Genus BaccaureaLour. adalah salah satu anggota dari famili Phyllanthaceae, merupakan genus yang cukup besar dengan anggota mencapai 43 spesies. Pada pengobatan tradisional genus Baccaurea telah dimanfaatkan masyarakat untuk mengobati  sembelit, pembengkakan pada mata, radang sendi, abses, sakit perut, memperlancar haid serta buang air kecil. Beberapa anggota genus Baccaureamemiliki potensi sebagai tumbuhan obat karena mengandung metabolit sekunder seperti alkaloid, flavonoid, karotenoid, antosianin, tanin, asam rosmarinik dan fenolik. Kandungan metabolit sekunder tersebut berpotensi sebagai antioksidan, antikanker, antimikroba, antidiabetes, antiinflamasi, antitripanosoma. B. ramiflora, B. lanceolata, B. macrocarpa, B. angulata, B. motleyana, B. brevipes, B. hookeri, B.recemosa, B. sapida, B. polyneura, B.parviflora dan B.dulcis adalah anggota genus Baccaurea yang berpotensi sebagai tumbuhan obat.

  20. The role of growth stop as a morphogenetic factor in Mastomys natalensis (Rodentia: Muridae)

    DEFF Research Database (Denmark)

    Fadda, Carlo; Leirs, Herwig

    2009-01-01

    The present study investigated growth patterns under three different environmental conditions in a single population of the rodent Mastomys natalensis (Rodentia, Muridae) in Morogoro, Tanzania. The study aimed to test whether and how post-weaning ontogenetic processes are affected by different...... environmental conditions. Morogoro is characterized by a bimodal rainfall pattern, with unreliable peaks occurring in November/December of some years and reliable ones in February to May. We recognized three different generation types. In the first one, the alpha generation, growth occurred during the dry...... there was a continuity between both rainfall peaks. Analyses of size and shape following both Huxley-Jolicoeur and Gould-Mosimann approaches revealed that the three groups differ significantly both in size and shape. In both cases, the importance of the environment in assessing growth trajectories during post...

  1. THE GENUS DERMATOPHILUS

    Science.gov (United States)

    Gordon, Morris A.

    1964-01-01

    Gordon, M. A. (New York State Department of Health, Albany). The genus Dermatophilus. J. Bacteriol. 88:509–522. 1964.—Seventeen strains of Dermatophilus originating in skin lesions of cattle, sheep, horses, deer, and man were compared as to conditions for growth, colonial characteristics under varying conditions, microscopic morphology, and biochemical reactions. All grew well aerobically at 37 C and were facultatively anaerobic. They were morphologically similar in both gross and microscopic appearance, and most produced motile spores. Stable gray variants often appeared among the orange-yellow “wild-type” colonies. Acid without gas was produced consistently from glucose and fructose, and transitorily from galactose, but was produced from none of eight other carbohydrates except belatedly by some strains from maltose. Almost all strains hydrolyzed casein, most of them digested BCP milk with varying rapidity, and the majority liquefied gelatin, but there was considerable variation in this last property. Differences crossed both host and geographic lines. It is concluded that all isolates can be accommodated in the species D. congolensis Van Saceghem 1915, emend. 1916, 1934, with D. dermatonomus and D. pedis falling into synonymy. Images PMID:14203370

  2. THE GENUS DERMATOPHILUS.

    Science.gov (United States)

    GORDON, M A

    1964-08-01

    Gordon, M. A. (New York State Department of Health, Albany). The genus Dermatophilus. J. Bacteriol. 88:509-522. 1964.-Seventeen strains of Dermatophilus originating in skin lesions of cattle, sheep, horses, deer, and man were compared as to conditions for growth, colonial characteristics under varying conditions, microscopic morphology, and biochemical reactions. All grew well aerobically at 37 C and were facultatively anaerobic. They were morphologically similar in both gross and microscopic appearance, and most produced motile spores. Stable gray variants often appeared among the orange-yellow "wild-type" colonies. Acid without gas was produced consistently from glucose and fructose, and transitorily from galactose, but was produced from none of eight other carbohydrates except belatedly by some strains from maltose. Almost all strains hydrolyzed casein, most of them digested BCP milk with varying rapidity, and the majority liquefied gelatin, but there was considerable variation in this last property. Differences crossed both host and geographic lines. It is concluded that all isolates can be accommodated in the species D. congolensis Van Saceghem 1915, emend. 1916, 1934, with D. dermatonomus and D. pedis falling into synonymy.

  3. Chemodiversity in the genus Aspergillus

    DEFF Research Database (Denmark)

    Frisvad, Jens Christian; Larsen, Thomas Ostenfeld

    2015-01-01

    to be characterized. The genus Aspergillus is cladistically holophyletic but phenotypically polythetic and very diverse and is associated to quite different sexual states. Following the one fungus one name system, the genus Aspergillus is restricted to a holophyletic clade that include the morphologically different...... biosynthetic family isoextrolites. However, it appears that secondary metabolites from one Aspergillus section have analogous metabolites in other sections (here also called heteroisoextrolites). In this review, we give a genus-wide overview of secondary metabolite production in Aspergillus species. Extrolites...

  4. Vliv sociálního prostředí na vývoj osobnostních rysů hraboše polního (Microtus arvalis)

    OpenAIRE

    ŠÍCHOVÁ, Klára

    2010-01-01

    The study investigated the effect of non-genetic social factors (represented by litter size, litter sex composition, and affinity to age cohort) on the development of consistent inter-specific differences in reaction to novelty in common voles (Microtus arvalis). The voles were tested in three behavioural experiments ? Forced Open Filed test (FOF), Unforced Open Field test (UFOF), and Radial-arm maze (RAM). A siginificant impact of compontents of social environment was detected.

  5. Paternal behavior and testosterone plasma levels in the Volcano Mouse Neotomodon alstoni (Rodentia: Muridae

    Directory of Open Access Journals (Sweden)

    Juana Luis

    2009-06-01

    Full Text Available Paternal behavior and testosterone plasma levels in the Volcano Mouse Neotomodon alstoni (Rodentia: Muridae. Although initially it was thought that testosterone inhibited the display of paternal behavior in males of rodents, it has been shown that in some species high testosterone levels are needed for exhibition of paternal care. In captivity, males of volcano Mouse (Neotomodon alstoni provide pups the same care provided by the mother, with the exception of suckling. Here we measured plasmatic testosterone concentrations 10 days after mating, five and 20 days postpartum, and 10 days after males were isolated from their families in order to determine possible changes in this hormone, associated to the presence and age of pups. Males of volcano Mouse exhibited paternal behavior when their testosterone levels were relatively high. Although levels of this hormone did not change with the presence or pups age, males that invested more time in huddling showed higher testosterone levels. It is possible that in the volcano Mouse testosterone modulates paternal behavior indirectly, as in the California mouse. Rev. Biol. Trop. 57 (1-2: 433-439. Epub 2009 June 30.Aunque inicialmente se pensaba que la testosterona inhibía el despliegue de conducta paterna en los machos de roedores, en algunas especies se ha demostrado que son necesarios niveles altos de testosterona para la exhibición de cuidados paternos. En cautiverio, los machos del ratón mexicano de los volcanes (Neotomodon alstoni, proporcionan a sus crías los mismos cuidados que la madre, con la excepción del amamantamiento. En este estudio se midieron los niveles plasmáticos de testosterona: en el día 10 del apareamiento, 5 y 20 días postparto, y 10 días después de aislar a los machos de sus familias, para establecer si los niveles de esta hormona cambian con relación a la presencia y edad de las crías. El ratón de los volcanes exhibió cuidados paternos cuando sus niveles de

  6. The jaw is a second-class lever in Pedetes capensis (Rodentia: Pedetidae

    Directory of Open Access Journals (Sweden)

    Philip G. Cox

    2017-08-01

    hystricomorphous morphology has evolved multiple times independently within Rodentia.

  7. The genus Vitex: A review.

    Science.gov (United States)

    Rani, Anita; Sharma, Anupam

    2013-07-01

    The review includes 161 references on the genus Vitex, and comprises ethnopharmacology, morphology and microscopy, phytoconstituents, pharmacological reports, clinical studies, and toxicology of the prominent species of Vitex. Essential oils, flavonoids, iridoid glycosides, diterpenoides and ligans constitute major classes of phytoconstituents of the genus. A few species of this genus have medicinal value, among these, leaves and fruits of V. agnus-castus Linn. (Verbenaceae) has been traditionally used in treatment of women complaints. V. agnus-castus has also been included in herbal remedies, which are in clinical use to regulate the menstrual cycle, reduce premenstrual symptom tension and anxiety, treat some menopausal symptoms as well as to treat hormonally induced acne. Despite a long tradition of use of some species, the genus has not been explored properly. In the concluding part, the future scope of Vitex species has been emphasized with a view to establish their multifarious biological activities and mode of action.

  8. Riemann surfaces of infinite genus

    CERN Document Server

    Feldman, Joel S; Trubowitz, Eugene

    2003-01-01

    In this book, Riemann surfaces of infinite genus are constructed geometrically by pasting together plane domains and handles. To achieve a meaningful generalization of the classical theory of Riemann surfaces to the case of infinite genus, one must impose restrictions on the asymptotic behavior of the Riemann surface. In the construction carried out here, these restrictions are formulated in terms of the sizes and locations of the handles and in terms of the gluing maps. The approach used in this book has two main attractions. The first is that much of the classical theory of Riemann surfaces, including the Torelli theorem, can be generalized to this class. The second is that solutions of Kadomcev-Petviashvilli equations can be expressed in terms of theta functions associated with Riemann surfaces of infinite genus constructed in the book. Both of these are developed here. The authors also present in detail a number of important examples of Riemann surfaces of infinite genus (hyperelliptic surfaces of infinit...

  9. Revision of the genus Phaeanthus (Annonaceae)

    NARCIS (Netherlands)

    Mols, J.B.; Keßler, P.J.A.

    2000-01-01

    A revision of the genus Phaeanthus Hook.f. & Thomson (Annonaceae) is presented. The genus comprises 8 species. A key to the fruiting and/or flowering specimens of the genus is included. The genus consists of shrubs to small-sized trees from Malesia and Vietnam. It is characterised by sepals and

  10. A descendent relation in genus 2

    OpenAIRE

    Belorousski, Pasha; Pandharipande, Rahul

    1998-01-01

    A new codimension 2 relation among descendent strata in the moduli space of stable, 3-pointed, genus 2 curves is found. The space of pointed admissible double covers is used in the calculation. The resulting differential equations satisfied by the genus 2 gravitational potentials of varieties in Gromov-Witten theory are described. These are analogous to the WDVV-equations in genus 0 and Getzler's equations in genus 1. As an application, genus 2 descendent invariants of the projective plane ar...

  11. A new species of Sciurodendrium (Nematoda: Heligmonellidae) in Sciurus aureogaster (Rodentia: Sciuridae) from Morelos, Mexico.

    Science.gov (United States)

    Falcón-Ordaz, Jorge; Lamothe-Argumedo, Marcos Rafael

    2006-06-01

    Sciurodendrium bravohollisae n. sp. (Heligmonellidae) is described as an intestinal parasite of 2 squirrels, Sciurus aureogaster Cuvier, 1829, collected from Los Robles, Municipio de Tlalnepantla, Morelos State, Mexico. The new species differs from all other congeners in possessing a very well-developed and sacciform genital cone. This is the seventh species described for the genus and the first one recorded in Mexico.

  12. Microdyromys (Gliridae, Rodentia, Mammalia) from the Early Oligocene of Montalbán (Prov. Teruel, Spain)

    NARCIS (Netherlands)

    Freudenthal, M.; Martín-Suárez, E.

    2007-01-01

    A new species of Microdyromys, M. puntarronensis, is described from the Early Oligocene locality Montalbán 8 (Teruel, Spain). It is compared with the other Early Oligocene species of the genus, M. misonnei. The latter is known from Hoogbutsel (Belgium) and Montalbán 1D. Montalbán 8 is intermediate

  13. The first report of Cryptosporidium spp. in Microtus fuscus (Qinghai vole) and Ochotona curzoniae (wild plateau pika) in the Qinghai-Tibetan Plateau area, China.

    Science.gov (United States)

    Zhang, Xueyong; Jian, Yingna; Li, Xiuping; Ma, Liqing; Karanis, Gabriele; Karanis, Panagiotis

    2018-05-01

    Cryptosporidium is one of the most important genera of intestinal zoonotic pathogens, which can infect various hosts and cause diarrhoea. There is little available information about the molecular characterisation and epidemiological prevalence of Cryptosporidium spp. in Microtus fuscus (Qinghai vole) and Ochotona curzoniae (wild plateau pika) in the Qinghai-Tibetan Plateau area of Qinghai Province, Northwest China. Therefore, the aim of this study was to determine Cryptosporidium species/genotypes and epidemiological prevalence in these mammals by detecting the SSU rRNA gene by PCR amplification. The Cryptosporidium spp. infection rate was 8.9% (8/90) in Qinghai voles and 6.25% (4/64) in wild plateau pikas. Positive samples were successfully sequenced, and the following Cryptosporidium species were found: C. parvum, C. ubiquitum, C. canis and a novel genotype in Qinghai voles and C. parvum and a novel genotype in wild plateau pikas. This is the first report of Cryptosporidium infections in M. fuscus and wild O. curzoniae in Northwest China. The results suggest the possibility of Cryptosporidium species transmission among these two hosts, the environment, other animals and humans and provide useful molecular epidemiological data for the prevention and control of Cryptosporidium infections in wild animals and the surrounding environments. The results of the present study indicate the existence of Cryptosporidium species infections that have potential public health significance. This is the first report of Cryptosporidium multi-species infections in these animal hosts.

  14. Regulation of Biofilm Formation by Hfq is Influenced by Presence of Plasmid pCD1 in Yersinia Pestis Biovar Microtus

    Directory of Open Access Journals (Sweden)

    Huiying Yang

    2017-10-01

    Full Text Available Yersinia pestis synthesizes the attached biofilms in the flea gut to promotethe flea-borne transmission of this deadly pathogen. Bellows et al. reported that the posttranscriptional regulator Hfq inhibites biofilm formation in apCD1− derivative of Y. pestis CO92, however, we found that Hfq stimulates biofilm production in a microtus strain of Y. pestis with the typical plasmids, including pCD1. When we cured pCD1 from this strain, the biofilm phenotype was in accordance with that reported by Bellows et al., indicating that the unknown pCD1-associated factors modulating the regulatory pathways of Y. pestis biofilm formation. Further gene regulation experiments using relevant pCD1+ Y. pestis strains disclose that Hfq positively regulates the expression of hmsHFRS and hmsT encoding a diguanylate cyclase while negatively regulates the expression of hmsP encoding the sole phosphodiesterase. However, Hfq has no regulatory effect on the expression of hmsCDE at the mRNA and protein levels. Our results suggest that we should be cautious to make conclusion from results based on the pCD1-cured Y. pestis.

  15. Fatherhood reduces the survival of adult-generated cells and affects various types of behaviors in the prairie vole (Microtus ochrogaster)

    Science.gov (United States)

    Lieberwirth, Claudia; Wang, Yue; Jia, Xixi; Liu, Yan

    2013-01-01

    Motherhood has profound effects on physiology, neuronal plasticity, and behavior. We conducted a series of experiments to test the hypothesis that fatherhood, similarly to motherhood, affects brain plasticity (such as cell proliferation and survival) and various behaviors in the highly social prairie vole (Microtus ochrogaster). In Experiment 1, adult males were housed with their same-sex cage mate (control), single-housed (isolation), or housed with a receptive female to mate and produce offspring (father) for 6 weeks. Fatherhood significantly reduced cell survival (assessed by bromodeoxyuridine labeling), but not cell proliferation (assessed by Ki67 labeling), in the amygdala, dentate gyrus of the hippocampus, and ventromedial hypothalamus, suggesting that fatherhood affects brain plasticity. In Experiment 2, neither acute (20 min) nor chronic (20 min daily for 10 consecutive days) pup exposure altered cell proliferation or survival in the brain, but chronic pup exposure increased circulating corticosterone levels. These data suggest that reduced cell survival in the brain of prairie vole fathers was unlikely to be due to the level of pup exposure and display of paternal behavior, and may not be mediated by circulating corticosterone. The effects of fatherhood on various behaviors (including anxiety-like, depression-like, and social behaviors) were examined in Experiment 3. The data indicated that fatherhood increased anxiety- and depression-like behaviors as well as altered aggression and social recognition memory in male prairie voles. These results warrant further investigation of a possible link between brain plasticity and behavioral changes observed due to fatherhood. PMID:23899240

  16. Influence of photoperiod and sex on locomotor behavior of meadow voles (Microtus pennsylvanicus) in an automated light-dark 'anxiety' test.

    Science.gov (United States)

    Ossenkopp, Klaus-Peter; van Anders, Sari M; Engeland, Christopher G; Kavaliers, Martin

    2005-10-01

    This study examined the influence of photoperiod on affective behavior (anxiety) of adult male and female meadow voles (Microtus pennsylvanicus), maintained in either a long or short day photoperiod, when tested in an automated (VersaMax) light-dark test. The light-dark test is based on an innate aversion of rodents to novel, brightly illuminated spaces and has been used with laboratory raised species, such as mice, to assess anxiety and/or fear related behaviors. Male and female meadow voles, housed either in a long day (LD: 16 h light) or short day (SD: 8 h light) photoperiod, were tested in the light-dark apparatus for 30 min on 3 consecutive days. All animals spent significantly (p light, but only in the LD voles. LD female voles were the least active group in the dark area on the first test day but the most active group in the light area, despite spending the least amount of time in this area on the second and third test days. The present results show that LD voles exhibit more anxiety related behaviors in this test situation than do SD voles. LD females avoided the brightly lit area the most, particularly when the apparatus was novel. Thus, both photoperiod and sex influence situation-based anxiety in this species. These findings suggest that meadow voles are an excellent animal model in which to examine the role of gonadal hormones, and their modulation of defence related neural systems, in the induction of anxiety.

  17. The hair of the common hare (Lepus europaeus Pall.) and of the common vole (Microtus arvalis Pall.) as indicator of the environmental pollution

    International Nuclear Information System (INIS)

    Paukert, J.

    1986-01-01

    Hairs of common hare (Lepus europaeus Pall.) and of common vole (Microtus arvalis Pall.) living in immission zones were investigated by INAA. Both the hare and the vole are almost exclusively herbivores; they consume relatively large amounts of contaminated food and reflect reliably the contamination degree of the respective ecosystem. The use of free-living animals for assessing environmental quality may complete effectively the information obtained by the examination of population. Though free-living animals lead a rather different way of existence it has been found that analyses of their hairs correlate very well with analyses of human hair. It may be expected that the changes in concentrations of heavy metals will manifest themselves earlier in animals than in men because the animals are strictly tied to local food sources. The hair samples of hares contained increased concentrations of Sm, La, Au, As, Se, Cr, Sc, Fe, Ce, Th and Co. The hairs of voles showed increased concentrations of Sm, La, Zn, As, Se, Cr, Sc, Fe, Sb, Ce, Cs and Co. A marked trend towards cumulation in hair was observed for the following elements: As, Se, Sc and Fe. The increase of their concentrations in the hairs of animals from the immission regions amounted to as much as 10 3 %. (author)

  18. Effects of chronic social defeat on social behaviors in adult female mandarin voles (Microtus mandarinus): Involvement of the oxytocin system in the nucleus accumbens.

    Science.gov (United States)

    Wang, Limin; Hou, Wenjuan; He, Zhixiong; Yuan, Wei; Yang, Jinfeng; Yang, Yang; Jia, Rui; Zhu, Zhenxiang; Zhou, Yue; Tai, Fadao

    2018-03-02

    Chronic social defeat affects many aspects of behavior. Most previous studies have focused on effects on males and defeat during adolescence. The extents to which chronic social defeat can impact female social behavior in adulthood and the neural mechanisms of such effects are poorly understood. Using highly social and aggressive female mandarin voles (Microtus mandarinus), the present study found that chronic social defeat reduced social preference in adult females, and that the defeated voles exhibited a high level of freeze, self-grooming and defensive behavior, as well as reduced exploration, intimacy and aggression during social interactions. Furthermore, chronic social defeat reduced levels of oxytocin (OT) and OT receptors (OTR) in the shell region of the nucleus accumbens (NACC). Intra-NACC shell OT microinjections reversed alterations in social behavior induced by chronic social defeat, whereas injections of an OTR antagonist (OTR-A) blocked the effects of OT. Taken together, our data demonstrate that chronic social defeat suppresses measures of sociability, and that these effects are mediated by the action of OT on the OTR in the NACC. NACC OT may be a promising target to treat socio-emotional disorders induced by chronic social stress. Copyright © 2017 Elsevier Inc. All rights reserved.

  19. The gastrointestinal nematodes of Paramelomys lorentzii and Mammelomys spp. (Rodentia: Muridae) with descriptions of a new genus and three new species (Heligmonellidae) from Papua New Guinea and Indonesia.

    Science.gov (United States)

    Smales, Lesley R

    2017-12-20

    Unidentified cestodes and 14 species of nematode and larvae that could not be placed to family level, were collected from the digestive tracts of 27 individuals of Paramelomys lorentzii, four of Mammelomys lanosus and a single M. rattoides from Papua New Guinea and Papua Indonesia. Of these three were new species. Hughjonestrongylus woolleyae sp. nov. can be distinguished from its congeners in having up to 26 ridges in the synlophe and a dissymmetric dorsal ray. Parvinema bafunminensis gen. nov., sp. nov. can be distinguished from all other genera in the family by the combination of features in the synlophe; with a carene, up to 17 ridges, and the pattern of ridge sizes. Parvinema helgeni sp. nov. differs from P. bafunminensis in the length of the spicule and the number of eggs in the uterus. The nematode assemblage of P. lorentzii had similar species richness to, and was also dominated by heligmonellids, as that of Paramelomys rubex, although the two assemblages differed in species composition.

  20. Phylogeny and Zoogeography of Six Squirrel Species of the Genus Sciurus (Mammalia, Rodentia), Inferred from Cytochrome b Gene Sequences(Phylogeny)

    OpenAIRE

    Tatsuo, Oshida; Ryuichi, Masuda; Chromosome Research Unit, Faculty of Science, Hokkaido University; Chromosome Research Unit, Faculty of Science, Hokkaido University

    2000-01-01

    To investigate the phylogenetic relationships between the New World Sciurus and the Old World Sciurus and their biogeographic history, the partial mitochondrial cytochrome b gene sequences (1,040 base pairs) were analyzed on six Sciurus species : S. aberti, S. carolinensis, S. lis, S. niger, S. stramineus, and S. vulgaris. Phylogenetic trees (maximum parsimony, neighbor-joining, and maximum likelihood methods) commonly showed two groups with high bootstrap values (73-100%) : one consisting of...

  1. Chemistry of the Genus Plectranthus

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    S. M. Batterjee

    2002-02-01

    Full Text Available This review presents the phytochemical constituents of the genus Plectranthus reported up to 1999. Only a tetrameric derivative of caffeic acid was isolated from P. japonicus, but a group of long-chain alkylphenols, of possible taxonomic significance in the genus, was also isolated. As a genus of the subfamily Nepetoideae, Plectranthus is free from iridoid glycosides and rich in essential oil (i.e. > 0.5% volatile oil on a dry weight basis. Diterpenoids are the more common secondary metabolites in Plectranthus. The majority of them are highly modified abietanoids. This seems to be similar to the pattern of diterpenoids observed for Salvia, but no clerodane diterpenoids were found in Plectranthus.

  2. Estudo experimental de Zygodontomys lasiurus (Rodentia-cricetidae com cepas de Trypanosoma cruzi Studies on the experimental infection of Zygodontomys lasiurus (Rodentia-Cricetidae with three strains of Trypanosoma cruzi

    Directory of Open Access Journals (Sweden)

    Monamaris M. Borges

    1983-10-01

    Full Text Available São apresentados resultados em relação a infecção expertmental de Zygodontomys lasiurus (Rodentia-Cricetidae com duas cepas de T. cruzi isoladas de casos humanos, Y e Berenice, e uma isolada de um triatomíneo silvestre, chamada costalimai. Foram realizados estudos em relação a evolução da parasitemia, duração da patência e prepatência da infecção. Com o objetivo de verificar a agressividade e tropismo tissular das cepas de T. cruzi nesta espécie de roedor, foram também realizados estudos histopatológicos. Os resultados obtidos mostraram que os níveis de parasitemias foram baixos para as três cepas estudadas. A patência da infecção variou de 14 a 16 dias nos animais inoculados com a cepa Y, 26 a 29 dias com a Berenice e 9 a 13 dias com a costalimai. O período prepatente variou de 3 a 5 dias nos animais inoculados com a cepa Y, de 2 a 6 dias com a cepa Berenice e de 6 a 8 dias com a costalimai. As três cepas apresentaram em Z. lasiurus, comprometimento nitidamente muscular, provocando reações leves, moderadas e intensas.Studies on the experimental infection of Zygodontomys lasiurus (Rodentia-Cricetidae are presented in the current paper. Three strains of T. cruzi were used in the experiments: two, Y and Berenice, were originated from human infection, while the third one was obtained from natural infection in a wild bug Triatoma costalimai. The evolution of the parasitemia was studied and the prepatent and patent periods determined. The tissular tropism and aggressiveness of the strains of T. cruzi were verified through histopathological studies. Results have shown that the parasitemia was always kept at low levels for all the strains. The prepatent period in the infected rodents varied from: 3 to 6 days in the Y strain; 2 to 6 days in the Berenice strain; 6 to 8 in the costalimai strain. The patent period showed the following duration patterns: 14 to 16 days in the Y strain; 26 to 29 in the Berenice strain and 6 to 8

  3. Actividad ovárica del tepezcuintle Agouti paca (Rodentia: Agoutidae en cautiverio

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    Rubén C Montes Pérez

    2006-09-01

    Full Text Available Se caracterizó la actividad ovárica de A. paca por medio de perfiles hormonales y estructuras ováricas. Se muestrearon ocho hembras (siete adultas y una juvenil en el criadero de la Facultad de Medicina Veterinaria y Zootecnia en el estado de Yucatán, México, durante aproximadamente dos meses. Se recolectaron muestras sanguíneas cada 3 y 6 días en animales anestesiados. Se estimaron los niveles de progesterona (P4 y 17 β estradiol (E2 sanguνneos por radioinmunoanαlisis. Las estructuras ováricas de animales muertos durante el periodo de muestreo fueron analizadas macro y microscópicamente. El ciclo ovárico duró 29±8.4 días, con niveles de 1.61±0.65 ng/ml para P4 y de 39±24 pg/ml para E2 durante la fase folicular, y de 6.18±3.70 ng/ml y 29±16 pg/ml para P4 y E2 respectivamente, en la fase luteal. Hubo diferencias (pOvarian activity of Agouti paca (Rodentia: Agoutidae under captivity. The ovarian activity of Agouti paca was characterized by hormonal profiles and ovarian structures. Samples of blood were taken from eight females (seven adults and one juvenile at the breeding grounds of the Facultad de Medicina Veterinaria y Zootecnia in Yucatán, México. Sampling lasted approximately two months and was done every three and six days. Blood was collected from anesthetized animals, and the levels of progesterone (P4 and 17 β estradiol (E2 were analized by radioimmunoassay technique. Macroscopic and microscopic analyses were carried out in ovaries of dead animals. The estrous cycle lasted 29±8.4 days, levels of 1.61±0.65 ng/ml for P4 and 39±24 pg/ml for E2 were observed for a follicular phase, 6.18±3.70 ng/ml and 29±16 pg/ml for P4 and E2 respectively in the luteal phase. Statistically significant differences were found between phases for P4 but not for E2. The presence of extragonadal steroids with levels of P4 of 1.9±0.77 ng/ml and E2 of 22±17 pg/ml were observed, which are not produced by the effects of managing stress

  4. Chemotaxonomy of the genus Stemphylium

    DEFF Research Database (Denmark)

    Olsen, Kresten Jon Kromphardt; Andersen, Birgitte

    2016-01-01

    The filamentous fungal genus Stemphylium (Anamophic Pleospora) is often found on various crops, and especially the common animal feed plant Medicago sativa (alfalfa) is often infected by this plant pathogen. With this in mind it is important to consider what consequences such a contamination can...... via HPLC-UV/VIS-MS analysis as a third method for identification and to investigate the chemical potential of the genus Stemphylium. A total of 253 unique compounds were used for chemotaxonomy and the majority of these were unknown compounds....

  5. Additions to the genus Acoridium

    NARCIS (Netherlands)

    Ames, Oakes

    1937-01-01

    The genus Acoridium is characterized by an extraordinary history. The original species, A. tenellum, a native of the Philippine Islands, was described at length from a fruiting specimen in 1843 by Nees von Esenbeck and referred to the Philydraceae. This treatment was prompted by the aspect of the

  6. The genus Babylonia (Prosobranchia, Buccinidae)

    NARCIS (Netherlands)

    Regteren Altena, van C.O.; Gittenberger, E.

    1981-01-01

    INTRODUCTION The members of the Ivory Shell genus Babylonia Schlüter, 1838, belonging to the Buccinidae, are characterized by more or less slender buccinoid shells, mostly ornamented with a beautiful colour-pattern. Some species, e.g. the type species B. spirata, have a conspicuous sutural canal

  7. A new karyotype for the spiny rat Clyomys laticeps (Thomas, 1909) (Rodentia, Echimyidae) from Central Brazil.

    Science.gov (United States)

    Bezerra, Alexandra M R; Pagnozzi, Juliana M; Carmignotto, Ana Paula; Yonenaga-Yassuda, Yatiyo; Rodrigues, Flávio H G

    2012-01-01

    Clyomys Thomas, 1916 is a semifossorial rodent genus of spiny rats represented by only one species, Clyomys laticeps, which inhabits the tropical savannas and grasslands of central Brazil and eastern Paraguay. Here we describe a new karyotype of Clyomys laticeps found in populations of Emas National Park, Goiás state, Brazil. The four analyzed specimens had a diploid number (2n) of 32 and a fundamental autosome number (FN) of 54. Cytogenetic data include conventional staining, CBG and GTG-banding. The karyotype presents 12 meta/submetacentric pairs (1 to 12) and 3 pairs of acrocentrics (13 to 15) with gradual decrease in size. The X chromosome is a medium submetacentric and the Y is a medium acrocentric. The semifossorial habits together with habitat specificity could have contributed to the karyological variations found on this genus.

  8. The development of the princial genus theorem

    OpenAIRE

    Lemmermeyer, Franz

    2002-01-01

    In this article we sketch the development of the principal genus theorem from its conception by Gauss in the case of binary quadratic forms to the cohomological formulation of the principal genus theorem of class field theory by Emmy Noether.

  9. A new species of Cystoisospora Frenkel, 1977 (Apicomplexa: Sarcocystidae) from Oecomys mamorae Thomas (Rodentia: Cricetidae) in the Brazilian Pantanal.

    Science.gov (United States)

    Barreto, Wanessa Teixeira Gomes; de Andrade, Gisele Braziliano; Viana, Lúcio André; de Oliveira Porfírio, Grasiela Edith; Santos, Filipe Martins; Perdomo, Alessandra Cabral; do Carmo, Jéssica Soares; da Silva, Alanderson Rodrigues; Maltezo, Taynara Rocha; Herrera, Heitor Miraglia

    2018-03-16

    Despite the great diversity of coccidians, to our knowledge, no coccidian infections have been described in Oecomys spp. In this context, we examined Oecomys mamorae Thomas (Rodentia: Cricetidae) from the Brazilian Pantanal for infections with enteric coccidia. Nine individuals were sampled, and one was found to be infected. The oöcysts were recovered through centrifugal flotation in sugar solution. Using morphological and morphometric features, we described a new species of Cystoisospora Frenkel, 1977. Sporulated oöcysts were ovoidal 20.0-29.1 × 16.4-23.2 (26.7 × 21.2) µm and contained two sporocysts, 12.9-19.1 × 9.4-13.9 (16.4 × 12.4) µm, each with four banana-shaped sporozoites. Polar granule and oöcyst residuum were both absent. We documented the developmental forms in the small intestine and described the histopathological lesions in the enteric tract. Our results indicate that the prevalence of Cystoisospora mamorae n. sp. in O. mamorae is low, and tissue damage in the enteric tract is mild, even in the presence of coccidian developmental stages.

  10. Habitat use by Oryzomys subflavus (Rodentia in an open shrubland formation in Restinga de Jurubatiba National Park, RJ, Brazil

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    H. G. Bergallo

    Full Text Available The Restinga de Jurubatiba has at least 10 plant formations, including open Clusia shrubland. This formation is composed of dense shrubs of many shapes and sizes, where Clusia hilariana is one of the most important plant species. Shrublands with Clusia (CC are poorer in plant species and less dense than shrublands without Clusia (SC. Oryzomys subflavus (Rodentia is the most abundant small mammal species in the open Clusia shrubland. We tested the hypothesis that the abundance of rodents would increase with the size of the patch and would be higher in SC shrublands. Rodents were captured, marked and released in three 780-m-long transects. At each capture site, we evaluated the shape of the shrubland patch, calculated the area and noted the category of the shrubland. Using ANCOVA, we ascertained whether the abundance of Oryzomys subflavus increased with the sampled area and used CC and SC shrublands differently. We also verified if the size of patches used by rodents varies in the same frequency as the size of available shrublands. Rodent abundance was found to increase significantly with the area. There were no differences in the size of the patches used by rodents and the frequency of the size of available patches. This finding indicates that O. subflavus, in the study area, is a generalist species that uses its habitat according to availability.

  11. Male and female meadow voles Microtus pennsylvanicus respond differently to scent marks from the top- middle-, and bottom-scent donors of an over-mark

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    Michael H. FERKIN, Nicholas J. HOBBS, Benjamin D. FERKIN, Adam C.FERKIN, Daniel A. FERKIN

    2011-08-01

    Full Text Available Previous studies have shown that individuals responded preferentially to the mark of the top-scent donor relative to that of the bottom-scent donor of an over-mark. However, terrestrial mammals are likely to encounter over-marks consisting of the scent marks of more than two same-sex conspecifics in the intersections of runways, near the nests of sexually receptive female conspecifics, and inside and along the borders of the territories of conspecifics. We determined how meadow voles, Microtus pennsylvanicus, respond to the marks of the top-, middle-, and bottom-scent donors of an over-mark. We tested the hypothesis that voles exposed to an over-mark will respond preferentially to the scent marks that were deposited more recently, the scent marks that were on top or near the top of the over-mark, compared to the scent marks that were deposited earlier or near the bottom of the over-mark. Voles spent more time investigating the mark of the top-scent donor than that of the either the middle- or bottom-scent donor. However, males but not female voles spent more time investigating the middle-scent mark than the bottom-scent mark. We also tested the hypothesis that voles evaluate and respond to over-marks differently from single scent marks. Voles spent more time investigating the marks of the top-, middle-, and bottom-scent donors compared to scent marks that were not part of the over-mark. Voles can distinguish among the overlapping scent marks of three scent donors and sex differences exist in the values they appear to attach to each of these scent marks [Current Zoology 57 (4: 441–448, 2011].

  12. The cyclic AMP receptor protein, CRP, is required for both virulence and expression of the minimal CRP regulon in Yersinia pestis biovar microtus.

    Science.gov (United States)

    Zhan, Lingjun; Han, Yanping; Yang, Lei; Geng, Jing; Li, Yingli; Gao, He; Guo, Zhaobiao; Fan, Wei; Li, Gang; Zhang, Lianfeng; Qin, Chuan; Zhou, Dongsheng; Yang, Ruifu

    2008-11-01

    The cyclic AMP receptor protein (CRP) is a bacterial regulator that controls more than 100 promoters, including those involved in catabolite repression. In the present study, a null deletion of the crp gene was constructed for Yersinia pestis bv. microtus strain 201. Microarray expression analysis disclosed that at least 6% of Y. pestis genes were affected by this mutation. Further reverse transcription-PCR and electrophoretic mobility shift assay analyses disclosed a set of 37 genes or putative operons to be the direct targets of CRP, and thus they constitute the minimal CRP regulon in Y. pestis. Subsequent primer extension and DNase I footprinting assays mapped transcriptional start sites, core promoter elements, and CRP binding sites within the DNA regions upstream of pla and pst, revealing positive and direct control of these two laterally acquired plasmid genes by CRP. The crp disruption affected both in vitro and in vivo growth of the mutant and led to a >15,000-fold loss of virulence after subcutaneous infection but a pestis and, particularly, is more important for infection by subcutaneous inoculation. It can further be concluded that the reduced in vivo growth phenotype of the crp mutant should contribute, at least partially, to its attenuation of virulence by both routes of infection. Consistent with a previous study of Y. pestis bv. medievalis, lacZ reporter fusion analysis indicated that the crp deletion resulted in the almost absolute loss of pla promoter activity. The plasminogen activator encoded by pla was previously shown to specifically promote Y. pestis dissemination from peripheral infection routes (subcutaneous infection [flea bite] or inhalation). The above evidence supports the notion that in addition to the reduced in vivo growth phenotype, the defect of pla expression in the crp mutant will greatly contribute to the huge loss of virulence of this mutant strain in subcutaneous infection.

  13. Fatherhood reduces the survival of adult-generated cells and affects various types of behavior in the prairie vole (Microtus ochrogaster ).

    Science.gov (United States)

    Lieberwirth, Claudia; Wang, Yue; Jia, Xixi; Liu, Yan; Wang, Zuoxin

    2013-11-01

    Motherhood has profound effects on physiology, neuronal plasticity, and behavior. We conducted a series of experiments to test the hypothesis that fatherhood, similarly to motherhood, affects brain plasticity (such as cell proliferation and survival) and various behaviors in the highly social prairie vole (Microtus ochrogaster). In Experiment 1, adult males were housed with their same-sex cage mate (control), single-housed (isolation), or housed with a receptive female to mate and produce offspring (father) for 6 weeks. Fatherhood significantly reduced cell survival (assessed by bromodeoxyuridine labeling), but not cell proliferation (assessed by Ki67-labeling), in the amygdala, dentate gyrus of the hippocampus, and ventromedial hypothalamus, suggesting that fatherhood affects brain plasticity. In Experiment 2, neither acute (20 min) nor chronic (20 min daily for 10 consecutive days) pup exposure altered cell proliferation or survival in the brain, but chronic pup exposure increased circulating corticosterone levels. These data suggest that reduced cell survival in the brain of prairie vole fathers was unlikely to be due to the level of pup exposure and display of paternal behavior, and may not be mediated by circulating corticosterone. The effects of fatherhood on various behaviors (including anxiety-like, depression-like, and social behaviors) were examined in Experiment 3. The data indicated that fatherhood increased anxiety- and depression-like behaviors as well as altered aggression and social recognition memory in male prairie voles. These results warrant further investigation of a possible link between brain plasticity and behavioral changes observed due to fatherhood. © 2013 Federation of European Neuroscience Societies and John Wiley & Sons Ltd.

  14. The impact of early life family structure on adult social attachment, alloparental behavior, and the neuropeptide systems regulating affiliative behaviors in the monogamous prairie vole (Microtus ochrogaster

    Directory of Open Access Journals (Sweden)

    Todd H Ahern

    2009-08-01

    Full Text Available Early social attachments lie at the heart of emotional and social development in many mammals, including humans. In nature, monogamous prairie voles (Microtus ochrogaster experience considerable natural variation in early social attachment opportunities due to differences in family structure (e.g., single-mothers, solitary breeding pairs, and communal groups. We exploited some of this natural variation in family structure to examine the influence of early social environment on the development of adult social behavior. First, we characterized the parental care received by pups reared biparentally (BP or by a single-mother (SM in the laboratory. Second, we examined whether BP- and SM-reared offspring differed in adult nurturing, bonding, and emotional behaviors. Finally, we investigated the effects of rearing condition on neuropeptide systems that regulate adult social behavior (oxytocin, vasopressin, and corticotropin-releasing factor [CRF]. Observations revealed that SM-reared pups were exposed more frequently (P<0.01, licked and groomed less (P<0.01, and matured more slowly (P<0.01 than BP-reared pups. In adulthood, there were striking socio-behavioral differences: SM-reared females showed low spontaneous, pup-directed alloparental behavior (P<0.01 and both males and females from the SM-reared condition showed delayed partner preference formation. While rearing did not impact neuropeptide receptor densities in the ventral forebrain as we predicted, SM-reared animals, particularly females, had increased OT content (P<0.01 and greater dorsal raphe CRF2 densities (P<0.05 and both measures correlated with licking and grooming experienced during the first 10 days of life. These results suggest that naturalistic variation in social rearing conditions can introduce diversity into adult nurturing and attachment behaviors.

  15. Symbiotic diversity in the cosmopolitan genus Acacia

    Science.gov (United States)

    James K. Leary; Paul W. Singleton; Paul G. Scowcroft; Dulal Borthakur

    2006-01-01

    Acacia is the second largest genus within the Leguminosae, with 1352 species identified. This genus is now known to be polyphyletic and the international scientific community will presumably split Acacia into five new genera. This review examines the diversity of biological nitrogen fixation symbiosis within Acacia as a single genus. Due to its global importance, an...

  16. Bioaktivitas dan Kandungan Genus Callicarpa

    OpenAIRE

    -, Erwin

    2016-01-01

    Callicarpa L is one genus of the family Lamiaceae. Callicarpa consisting of approximately 150 species such as shrubs and trees. Various species of Callicarpa is widely used in traditional medicine and it was potentially as antinociceptive, antioxidant, antimicrobial and thrombolytic drugs. Based on various reports results of previous studies have found various types of secondary metabolites from plants Callicarpa such as terpenoids, steroids and flavonoids. Some of these compounds can be deve...

  17. On the concordance genus of topologically slice knots

    OpenAIRE

    Hom, Jennifer

    2012-01-01

    The concordance genus of a knot K is the minimum Seifert genus of all knots smoothly concordant to K. Concordance genus is bounded below by the 4-ball genus and above by the Seifert genus. We give a lower bound for the concordance genus of K coming from the knot Floer complex of K. As an application, we prove that there are topologically slice knots with 4-ball genus equal to one and arbitrarily large concordance genus.

  18. Natural medicine: the genus Angelica.

    Science.gov (United States)

    Sarker, S D; Nahar, L

    2004-06-01

    More than 60 species of medicinal plants belong to the genus Angelica (Family: Apiaceae). Many of these species have long been used in ancient traditional medicine systems, especially in the far-east. Various herbal preparations containing Angelica species are available over-the-counter, not only in the far-eastern countries, but also in the western countries like USA, UK, Germany, etc. For centuries, many species of this genus, e.g. A. acutiloba, A. archangelica, A. atropupurea, A. dahurica, A. japonica, A. glauca, A. gigas, A. koreana, A. sinensis, A. sylvestris, etc., have been used traditionally as anti-inflammatory, diuretic, expectorant and diaphoretic, and remedy for colds, flu, influenza, hepatitis, arthritis, indigestion, coughs, chronic bronchitis, pleurisy, typhoid, headaches, wind, fever, colic, travel sickness, rheumatism, bacterial and fungal infections and diseases of the urinary organs. Active principles isolated from these plants mainly include various types of coumarins, acetylenic compounds, chalcones, sesquiterpenes and polysaccharides. This review evaluates the importance of the genus Angelica in relation to its traditional medicinal uses, alternative medicinal uses in the modern society and potential for drug development, and summarises results of various scientific studies on Angelica species or Angelica-containing preparations for their bioactivities including, antimicrobial, anticancer, antitumour, analgesic, anti-inflammatory, hepatoprotective, nephroprotective, etc.

  19. Biodiversity of the genus Cladophialophora

    Science.gov (United States)

    Badali, H.; Gueidan, C.; Najafzadeh, M.J.; Bonifaz, A.; van den Ende, A.H.G. Gerrits; de Hoog, G.S.

    2008-01-01

    Cladophialophora is a genus of black yeast-like fungi comprising a number of clinically highly significant species in addition to environmental taxa. The genus has previously been characterized by branched chains of ellipsoidal to fusiform conidia. However, this character was shown to have evolved several times independently in the order Chaetothyriales. On the basis of a multigene phylogeny (nucLSU, nucSSU, RPB1), most of the species of Cladophialophora (including its generic type C. carrionii) belong to a monophyletic group comprising two main clades (carrionii- and bantiana-clades). The genus includes species causing chromoblastomycosis and other skin infections, as well as disseminated and cerebral infections, often in immunocompetent individuals. In the present study, multilocus phylogenetic analyses were combined to a morphological study to characterize phenetically similar Cladophialophora strains. Sequences of the ITS region, partial Translation Elongation Factor 1-α and β-Tubulin genes were analysed for a set of 48 strains. Four novel species were discovered, originating from soft drinks, alkylbenzene-polluted soil, and infected patients. Membership of the both carrionii and bantiana clades might be indicative of potential virulence to humans. PMID:19287540

  20. CYANOBACTERIA OF THE GENUS PROCHLOROTHRIX

    Directory of Open Access Journals (Sweden)

    Alexander Vasilievich Pinevich

    2012-05-01

    Full Text Available Green cyanobacteria are distinguished from blue-green ones by the possession of a chlorophyll-containing light harvesting antenna. Three genera of green cyanobacteria, namely Acaryochloris, Prochlorococcus and Prochloron, are unicellular and of marine habitat; Prochlorococcus marinus attracts most attention due to its outstanding role in prime productivity. The fourth genus, Prochlorothrix, is represented by filamentous freshwater strains. Unlike the rest of green cyanobacteria, Prochlorothrix is paradoxically rare: it has been isolated from two European locations only. Taking into account fluctuating blooms, morphological resemblance with Planktothrix and Pseudanabaena, and unsuccessful enrichment of Prochlorothrix, the preferred strategy of search for this cyanobacterium is based on PCR with natural DNA and specific primers. This approach already demonstrates a broader distribution of Prochlorothrix: marker genes have been found in at least two additional locations. Despite the growing evidence for naturally occurring Prochlorothrix, there are only a few cultivated strains, and only one of them (PCC 9006 is claimed to be axenic. In multixenic cultures, Prochlorothrix is accompanied by heterotrophic bacteria, indicating a consortium-type association. The genus Prochlorothrix includes two species: P. hollandica and P. scandica based on distinctions in genomic DNA, cell size, temperature optimum, and fatty acid composition of membrane lipids. In this short review, the properties of cyanobacteria of the genus Prochlorothrix are described, and the evolutionary scenario of green cyanobacteria, especially taking into account their role in the origin of simple chloroplast is given.

  1. On genus expansion of superpolynomials

    Science.gov (United States)

    Mironov, Andrei; Morozov, Alexei; Sleptsov, Alexei; Smirnov, Andrey

    2014-12-01

    Recently it was shown that the (Ooguri-Vafa) generating function of HOMFLY polynomials is the Hurwitz partition function, i.e. that the dependence of the HOMFLY polynomials on representation R is naturally captured by symmetric group characters (cut-and-join eigenvalues). The genus expansion and expansion through Vassiliev invariants explicitly demonstrate this phenomenon. In the present paper we claim that the superpolynomials are not functions of such a type: symmetric group characters do not provide an adequate linear basis for their expansions. Deformation to superpolynomials is, however, straightforward in the multiplicative basis: the Casimir operators are β-deformed to Hamiltonians of the Calogero-Moser-Sutherland system. Applying this trick to the genus and Vassiliev expansions, we observe that the deformation is fully straightforward only for the thin knots. Beyond the family of thin knots additional algebraically independent terms appear in the Vassiliev and genus expansions. This can suggest that the superpolynomials do in fact contain more information about knots than the colored HOMFLY and Kauffman polynomials. However, even for the thin knots the beta-deformation is non-innocent: already in the simplest examples it seems inconsistent with the positivity of colored superpolynomials in non-(anti)symmetric representations, which also happens in I. Cherednik's (DAHA-based) approach to the torus knots.

  2. On genus expansion of superpolynomials

    International Nuclear Information System (INIS)

    Mironov, Andrei; Morozov, Alexei; Sleptsov, Alexei; Smirnov, Andrey

    2014-01-01

    Recently it was shown that the (Ooguri–Vafa) generating function of HOMFLY polynomials is the Hurwitz partition function, i.e. that the dependence of the HOMFLY polynomials on representation R is naturally captured by symmetric group characters (cut-and-join eigenvalues). The genus expansion and expansion through Vassiliev invariants explicitly demonstrate this phenomenon. In the present paper we claim that the superpolynomials are not functions of such a type: symmetric group characters do not provide an adequate linear basis for their expansions. Deformation to superpolynomials is, however, straightforward in the multiplicative basis: the Casimir operators are β-deformed to Hamiltonians of the Calogero–Moser–Sutherland system. Applying this trick to the genus and Vassiliev expansions, we observe that the deformation is fully straightforward only for the thin knots. Beyond the family of thin knots additional algebraically independent terms appear in the Vassiliev and genus expansions. This can suggest that the superpolynomials do in fact contain more information about knots than the colored HOMFLY and Kauffman polynomials. However, even for the thin knots the beta-deformation is non-innocent: already in the simplest examples it seems inconsistent with the positivity of colored superpolynomials in non-(anti)symmetric representations, which also happens in I. Cherednik's (DAHA-based) approach to the torus knots

  3. Revision of fleas of the genus Plocopsylla belonging to the 'angusticeps-lewisi' complex in the Andean biogeographic region, with the description of a new species.

    Science.gov (United States)

    Sanchez, J; Beaucournu, J-C; Lareschi, M

    2015-06-01

    In Argentina, the Andean biogeographic region accommodates the most diverse population of fleas in the country. The Craneopsyllinae (Siphonaptera: Stephanocircidae) represent one of the most commonly found subfamilies in this region and show some endemism and high diversity. Plocopsylla is the most diverse genus of Craneopsyllinae; it includes 10 species mainly distributed in the Patagonian subregion, which parasitize sigmodontine rodents (Rodentia: Cricetidae). We describe and illustrate the morphology of the aedeagus in species of Plocopsylla that belong to the 'angusticeps-lewisi' complex. This character is of diagnostic value in differentiating among species. A new species of this complex, Plocopsylla (Plocopsylla) linardii sp. n., is described and identified by the shape and chaetotaxy of the distal arm of sternite IX, as well as by the shape of the median dorsal lobe of the aedeagus. New host associations for this complex and range extensions for most of its species are reported. Plocopsylla (P.) silewi is recorded for the first time in Argentina. The southern limits of the distributions of Plocopsylla (P.) lewisi and Plocopsylla (P.) wilesi are extended to Santa Cruz Province. The angusticeps-lewisi complex is found for the first time in San Juan Province. The information may be useful in epidemiological studies of flea-borne diseases. © 2015 The Royal Entomological Society.

  4. Allozymic characterization and evolutionary relationships in the Brazilian Akodon cursor species group (Rodentia-Cricetidae)

    Energy Technology Data Exchange (ETDEWEB)

    Rieger, T.T.; Weimer, T.A. [Universidade Federal do Rio Grande do, Porto Alegre (Brazil); Langguth, A. [Universidade Federal da Paraiba, Joao Pessoa (Brazil)

    1995-10-01

    The present study involved an electrophoretic survey of 22 protein loci in 269 individuals belonging to three species of the genus Akodon, A. aff. cursor (2n=16), A. cursor (2n=14/15), and A. montensis (2n=24/25/26), collected in Eastern Brazil. The joint results of gene diversity, genetic distances, phenetic analyses, and phylogenetic trees suggested that A. aff. cursor has recently separated from A. cursor and that the three species have experienced a recent chromosomal divergence followed by low allozyme differentiation. These data are in agreement with their classification as sibling species. 37 refs., 1 fig., 3 tabs.

  5. A new species of Calomys Waterhouse (Rodentia, Sigmodontinaefrom the Cerrado of Central Brazil

    Directory of Open Access Journals (Sweden)

    Cibele R. Bonvicino

    2003-06-01

    Full Text Available A new Brazilian Calomys Waterhouse, 1837 species is described based on morphologic and karyologic data. This species is endemic to the Cerrado of Central Brazil and allopatric with all other species of the genus Calomys. Its chromosome complement (2n = 46, AN = 66 is different from those described in other Calomys species. Morphometric analysis significantly distinguished this new species from other Calomys of the Brazilian fauna like C. callosus (Renger, 1830, C. expulsus (Lund, 1841 and C. tener (Winge, 1887 and placed it among the large-sized Calomys.

  6. Evolución de los géneros Mimomys, Arvicola y Allophaiomys (Arvicolidae, Rodentia, Mammalia en el Plioceno y Pleistoceno de la Península Ibérica

    Directory of Open Access Journals (Sweden)

    Ruiz Bustos, A.

    1985-04-01

    Full Text Available A new interpretation of the philogeny of the arvicolids Mimomys, Arvicola and Allophaiomys is proposed in this paper as a result of the comparison between several faunas of the Pliocene and lower and middle Pleistocene of the Iberian Península.
    The morphologic study of the abundant populations of Mimomys of the Pliocene bed from Moreda, has made it possible to establish, for each species, four divisions according to the stages of wear of the first lower molar. The evolution of Mimomys is closely related to the qualitative and quantitative variations of those stages of wear (from the most primitive to the most progressive ones in the course of the time and for each different populations of Mimomys, which leads us to propose the following scheme of the evolution of the genus: During the Pliocene, two evolutionary lines of Mimomys are present since the appearance of the genus in the Iberian Peninsula: one of small size, in which the acquisition of cement in the molars is progressive, That one is represented by the following evolutionary stages: M. stehlini in the Ruscinian and M. pliocaenicus-M, medasensis in the upper Pliocene. the other line, of big size, is represented by M. cappettai and the cement in the molars exists already in the niore primitive populations. At the end of the Pliocene appears M. reidi of small size, By its similar morphology, the latter species is very probably the ancestor of the bigger M. savini that belongs to the lower and middle Pleistocene. On the other hand, the morphologic identity and the biometric proximity of Allophaiomys chalinei to the populationsof small size of Arvicola (A. mosbachensis, leads us to propose the evolutionary line: Arvicola deucalion-Arvicola chalinei-Arvicola mosbachensis. Therefore, Mimomys is an independent and coetaneus genus of Arvicola that disappeared in the upper

  7. Effect of ENSO-driven precipitation on population irruptions of the Yangtze vole Microtus fortis calamorum in the Dongting Lake region of China.

    Science.gov (United States)

    Zhang, Zhibin; Xu, Lei; Guo, Cong; Wang, Yong; Guo, Yongwang

    2010-06-01

    The Yangtze vole (Microtus fortis Buechner, 1889) is a small herbivore species that inhabits lake beaches in the Dongting Lake region along the Yangtze River in Southern China. Its population shows strong oscillations during the wet season due to summer precipitation-induced immigration away from the lake into adjacent rice fields. The effect of El Niño-Southern Oscillation-driven precipitation on population abundance and growth of the vole species is not fully understood. We undertook an analysis of the combined data of 4 time series covering 1981-2006 from 4 different sites and a separate analysis on a single time series (1981-2006) from one site. Our results demonstrate that a dual effect of El Niño-Southern Oscillation-driven precipitation on the population abundance of voles is time-dependent: precipitation in the current year has a positive effect, whereas precipitation in the previous year has a negative effect. The dual effect of precipitation on vole population is well explained by the unique interactions among vole population, precipitation water level and the lake beach habitat around Dongting Lake. We found that drier than average weather of the previous year benefited voles because their breeding habitats, lake beaches, were exposed for long stretches of time. Wet weather was found to increase the number of voles inhabiting rice fields because as the water level of the lake rose they were forced from beaches into surrounding rice fields. Summer precipitation in the Dongting Lake region was found to be positively associated with the sea surface temperature (SST) of the eastern tropical Pacific Ocean of the previous year and winter SST and spring SST of the current year. Annual rates of increase in the vole population of the reconstructed time series are negatively associated with the vole abundance and autumn precipitation of the previous year and winter precipitation of the current years. These results suggest that both extrinsic and density

  8. Maternal effects and population regulation: maternal density-induced reproduction suppression impairs offspring capacity in response to immediate environment in root voles Microtus oeconomus.

    Science.gov (United States)

    Bian, Jiang-Hui; Du, Shou-Yang; Wu, Yan; Cao, Yi-Fan; Nie, Xu-Heng; He, Hui; You, Zhi-Bing

    2015-03-01

    The hypothesis that maternal effects act as an adaptive bridge in translating maternal environments into offspring phenotypes, and thereby affecting population dynamics has not been studied in the well-controlled fields. In this study, the effects of maternal population density on offspring stress axis, reproduction and population dynamics were studied in root voles (Microtus oeconomus). Parental enclosures for breeding offspring were established by introducing six adults per sex into each of 4 (low density) and 30 adults per sex into each of another 4 (high density) enclosures. Live-trapping started 2 weeks after. Offspring captured at age of 20-30 days were removed to the laboratory, housed under laboratory conditions until puberty, and subsequently used to establish offspring populations in these same enclosures, after parental populations had been removed. [Correction added on 8 January 2015 after first online publication: '10-20 days' has been changed to '20-30 days.'] Offspring from each of the two parental sources were assigned into four enclosures with two for each of the two density treatments used in establishing parental populations (referred to as LL and LH for maternally unstressed offspring, assigned in low and high density, and HL and HH for maternally stressed offspring, assigned in low and high density). Faecal corticosterone metabolites (FCM) levels, offspring reproduction traits and population dynamics were tested following repeated live-trapping over two seasons. Differential fluctuations in population size were observed between maternally density-stressed and density-unstressed offspring. Populations in LL and LH groups changed significantly in responding to initial density and reached the similar levels at beginning of the second trapping season. Populations in HL and HH groups, however, were remained relatively steady, and in HL group, the low population size was sustained until end of experiment. Maternal density stress was associated with

  9. A remarkable autosomal heteromorphism in Pseudoryzomys simplex 2n = 56; FN = 54-55 (Rodentia, Sigmodontinae

    Directory of Open Access Journals (Sweden)

    Camila Nascimento Moreira

    2013-01-01

    Full Text Available Pseudoryzomys simplex, the false rice rat, is a monotypic genus of the Oryzomyini tribe (Sigmodontinae distributed in part of Bolivia, Paraguay, Argentina and Brazil. Its diploid number has been described as 56 acrocentric chromosomes decreasing in size and no karyotype figure has been depicted. Herein, we present karyotypic data on P. simplex, including chromosome banding and molecular fluorescent in situ hybridization using telomeric sequences and the whole X-chromosome of its sister clade Holochilus brasiliensis (HBR as probes. A case of remarkable autosomal heteromorphism due to the presence of a whole heterochromatic arm leading to the variability of FN is reported, as well as the occurrence of regions of homology between the X and Y chromosomes (pseudoautosomal regions after chromosome painting with the HBR X probe on P. simplex metaphases.

  10. NSR superstring measures in genus 5

    International Nuclear Information System (INIS)

    Dunin-Barkowski, Petr; Sleptsov, Alexey; Stern, Abel

    2013-01-01

    Currently there are two proposed ansätze for NSR superstring measures: the Grushevsky ansatz and the OPSMY ansatz, which for genera g⩽4 are known to coincide. However, neither the Grushevsky nor the OPSMY ansatz leads to a vanishing two-point function in genus four, which can be constructed from the genus five expressions for the respective ansätze. This is inconsistent with the known properties of superstring amplitudes. In the present paper we show that the Grushevsky and OPSMY ansätze do not coincide in genus five. Then, by combining these ansätze, we propose a new ansatz for genus five, which now leads to a vanishing two-point function in genus four. We also show that one cannot construct an ansatz from the currently known forms in genus 6 that satisfies all known requirements for superstring measures

  11. 2+1 gravity for genus >1

    International Nuclear Information System (INIS)

    Nelson, J.E.; Regge, T.

    1991-01-01

    We analysed the algebra of observables for the simple case of a genus 1 initial data surface Σ 2 for 2+1 De Sitter gravity. Here we extend the analysis to higher genus. We construct for genus 2 the group of automorphisms H of the homotopy group π 1 induced by the mapping class group. The group H induces a group D of canonical transformations on the algebra of observables which is related to the braid group for 6 threads. (orig.)

  12. Integrable systems in the infinite genus limit

    OpenAIRE

    Gesztesy, Fritz

    2001-01-01

    We provide an elementary approach to integrable systems associated with hyperelliptic curves of infinite genus. In particular, we explore the extent to which the classical Burchnall-Chaundy theory generalizes in the infinite genus limit, and systematically study the effect of Darboux transformations for the KdV hierarchy on such infinite genus curves. Our approach applies to complex-valued periodic solutions of the KdV hierarchy and naturally identifies the Riemann surface familiar from stand...

  13. Reticulate Pleistocene evolution of Ethiopian rodent genus along remarkable altitudinal gradient

    Czech Academy of Sciences Publication Activity Database

    Bryja, Josef; Kostin, D.; Meheretu, Y.; Šumbera, R.; Bryjová, Anna; Kasso, M.; Mikula, Ondřej; Lavrenchenko, L. A.

    2018-01-01

    Roč. 118, January (2018), s. 75-87 ISSN 1055-7903 Institutional support: RVO:68081766 Keywords : Stenocephalemys * mitochondrial introgression * Ethiopian highlands * Rodentia * ecological speciation * Great Rift Valley Subject RIV: EG - Zoology Impact factor: 4.419, year: 2016

  14. Stertomys laticrestatus, a new glirid (dormice, Rodentia) from the insular fauna of Gargano (Prov. of Foggia, Italy)

    NARCIS (Netherlands)

    Daams, R.; Freudenthal, M.

    1985-01-01

    This is one of the papers in a series of monographs on the insular mammal faunas of the Gargano Peninsula in South Italy. It deals with the description of a new genus and species of a giant dormouse, Stertomys laticrestatus.

  15. THE GENUS TEIJSMANNIODENDRON KOORDERS (VERBENACEAE

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    A. J. G. H. KOSTERMANS

    2015-11-01

    Full Text Available 1. The present notes on Teijsmanniodendron are based on a study of the spec- imens from Herbarium Bogoriense and the Herbarium of the Singapore Botanic Garden. 2. The taxonomic value of the principal characters and their variation are discussed. Each of the species recognized is annotated. 3. A delimitation and subdivision of the genus in two sections,  Plurifoliolatae Kosterm.  and 'Unifoliolatae Kosterm  is proposed. 4. A key to the 12 species and 1 variety distinguished, is included. 5. One new species is provisionally described (but not named, and one new variety, Teijsmanniodendron pteropodum var. auriculatum Kosterm, is published. 6. The following new combinations are made: Teijsmanniodendron coriaceum B. Clarke Kosterm,, T. hollrungii (Warb. Kosterm. T. holophyllum (Bak. Kos- term, T.novoguineense (Kan. & Hatus. Kosterm., T. sarawakanum (H. H. W. Pears. Kosterm., T. smilacifolium (H. H. W. Pears. Kosterm., and T. subspieatum (Hallier f. Kosterm. 7. The genus Xerocarpa H. 3. Lam (non Spach is rejected; its only species, X. avicenniaefoliola H. J. Lam, is referred to Teijsmanniodendron ahernianum (Merr. Bakh. In addition, the following reductions are made: Teijsmanniodendron mono- phyllum Kurata = T. hollrungii (Warb. Kosterm.; Vitex bankae H. J. Lam = T. ahernianum (Merr. Bakh., V. bogoriensis H. J. Lam = T. ahernianum (Merr. Bakh.; V. koordersii H. J. Lam t= T. pteropodum (Miq. Bakh.; V. tetragona Hallier f. = T. sarawakanum (H. H. W. Pears. Kosterm.; V. venosa H. J. Lam = T. coriaceum (C. B. Clarke Kosterm. Possible identity of T. longifolium (Merr. Merr. and T. bogoriense is suggested: the identity of T. simplicifolium Merr. and T. smilacifolium (H. H-, W. Pears. Kosterm. is indicated as probable. 8. Vitex subspicata Hallier f. and V. holophylla Bak. included by Lam in vitex hollrungii Warb. are reinstated as distinct species of Teijsmanniodendron.

  16. Evolution of the Genus Homo

    Science.gov (United States)

    Tattersall, Ian; Schwartz, Jeffrey H.

    2009-05-01

    Definition of the genus Homo is almost as fraught as the definition of Homo sapiens. We look at the evidence for “early Homo,” finding little morphological basis for extending our genus to any of the 2.5-1.6-myr-old fossil forms assigned to “early Homo” or Homo habilis/rudolfensis. We also point to heterogeneity among “early African Homo erectus,” and the lack of apomorphies linking these fossils to the Asian Homo erectus group, a cohesive regional clade that shows some internal variation, including brain size increase over time. The first truly cosmopolitan Homo species is Homo heidelbergensis, known from Africa, Europe, and China following 600 kyr ago. One species sympatric with it included the >500-kyr-old Sima de los Huesos fossils from Spain, clearly distinct from Homo heidelbergensis and the oldest hominids assignable to the clade additionally containing Homo neanderthalensis. This clade also shows evidence of brain size expansion with time; but although Homo neanderthalensis had a large brain, it left no unequivocal evidence of the symbolic consciousness that makes our species unique. Homo sapiens clearly originated in Africa, where it existed as a physical entity before it began (also in that continent) to show the first stirrings of symbolism. Most likely, the biological underpinnings of symbolic consciousness were exaptively acquired in the radical developmental reorganization that gave rise to the highly characteristic osteological structure of Homo sapiens, but lay fallow for tens of thousands of years before being “discovered” by a cultural stimulus, plausibly the invention of language.

  17. Nucleolus organizer regions and B-chromosomes of wood mice (mammalia, rodentia, Apodemus)

    Energy Technology Data Exchange (ETDEWEB)

    Boeskorov, G.G. [Yakutia Institute of Biology, Yakutsk (Russian Federation); Kartavtseva, I.V. [Biological Soil Institute, Vladivostok (Russian Federation); Zagorodnyuk, I.V. [Shmal`gausen Institute of Zoology, Kiev (Ukraine); Belyanin, A.N. [Saratov State Univ. (Russian Federation); Lyapunova, E.A. [Kol`tsov Institute of Developmental Biology, Moscow (Russian Federation)

    1995-02-01

    Distribution of nucleolus organizer regions (NORs) in karyotypes was studied in 10 species of wood mice, including Apodemus flavicollis, A. sylvaticus, A. uralensis (=A. microps), A. fulvipectus (=A. falzfeini), A. ponticus, A. hyrcanicus, A. mystacinus, A. agrarius, A. peninsulae, and A. speciosus. Peculiarities of NOR location in karyotypes can be used in interspecific diagnostics of wood mice. Intraspecific polymorphism of A. sylvaticus, A. agrarius, and A. peninsulae in terms of the number of NORs and their localization in chromosomes can serve as evidence for karyological differentiation in certain populations of these species. The minimum number of active NORs in mice of the genus Apodemus is two to four. Two A. flavicollis wood mice with karyotypes containing one small acrocentric B-chromosome (2n = 49) were identified among animals captured in Estonia. In A. peninsulae, B-chromosomes were found among animals captured in the following regions: the vicinity of Kyzyl (one mouse with 17 microchromosomes, 2n = 65); the vicinity of Birakan (two mice with one metacentric chromosome each, 2n = 49); and in the Ussuri Nature Reserve (one mouse with five B-chromosomes, including three metacentric and two dotlike chromosomes; 2n = 53). In the latter animal, the presence of NORs on two metacentric B-chromosomes was revealed; this is the first case of identification of active NORs on extra chromosomes of mammals. 29 refs., 4 figs., 1 tab.

  18. Recent radiation in West African Taterillus (Rodentia, Gerbillinae): the concerted role of chromosome and climatic changes.

    Science.gov (United States)

    Dobigny, G; Aniskin, V; Granjon, L; Cornette, R; Volobouev, V

    2005-11-01

    West African gerbils of the genus Taterillus constitute a complex of seven sibling species distributed from sudano-guinean to saharo-sahelian regions. They display radically rearranged karyotypes despite low genic divergence and a very recent differentiation, that is, within the last 0.4 Myr for the six most derived species. We here provide a comparison of the seven specific karyotypes and perform a cladistic analysis using chromosomal rearrangements character states. When a posteriori polarized mutations were mapped onto the phylogenetic tree, 38 rearrangements were identified as fixed during the evolution of these rodents. This makes Taterillus one of the most striking examples of accelerated chromosomal evolution within placental mammals. Taking into account the types of chromosomal changes involved, divergence times between lineages, genetic distances, as well as reassessed geographic distributions, we suggest that (1) speciation in West African Taterillus was driven by chromosomal changes, and (2) the paleoclimatic oscillations of the Sahara desert have played a major role in their evolution. In particular, elevated plasticity of the Taterillus genome, as suggested by the patterns observed for some repetitive elements, would have led to a higher probability of mutation. We hypothesize that the process underpinning cladogenesis most probably involved highly underdominant genomic rearrangements that were fixed following pronounced populational bottlenecks resulting from drastic climatic and subsequent environmental changes. Major African rivers formed significant barriers to dispersal, limiting expansion during the more moist and so favorable periods. This scenario would explain the current parapatric species distributions and their relationship to the West African hydrographic features.

  19. Revision of the African genus Annickia (Annonaceae)

    NARCIS (Netherlands)

    Versteegh, C.P.C.; Sosef, M.S.M.

    2007-01-01

    complete revision, including a key to the species, drawings and distribution maps, of the tropical African Annonaceae genus Annickia (= Enantia Oliv., non Falc.) is presented. The exact phylogenetic position of this genus within the family has long been, and in fact still is, unclear. The status of

  20. Typification of the genus Macropsidium Bl. (Myrtaceae)

    NARCIS (Netherlands)

    Steenis, van C.G.G.J.

    1971-01-01

    In revising Myrtaceae Blume correctly concluded in 1849 that Psidium rubrum Lour, from Indo-China could not belong to that neotropical genus. He erected a new genus Macropsidium Bl., to accommodate it, adding at the same time the description of a second new species from the Moluccas. It is desirable

  1. A revision of the genus Dillenia

    NARCIS (Netherlands)

    Hoogland, R.D.

    1952-01-01

    The present paper is an extension of my revision of the Malaysian species of the genus Dillenia L. (Wormia Rottb. included) inserted in the revision of the Dilleniaceae in the Flora Malesiana ser. I, vol. 4, part 3, pp. 141—174, published in December 1951. A critical revision of the whole genus has

  2. Phenetic relationships in the genus Myotis

    NARCIS (Netherlands)

    Findley, James S.

    1970-01-01

    The genus Myotis is of interest to the evolutionist because of its diversity and because of its nearly cosmopolitan distribution. An understanding of the biology of this remarkable genus may provide insight into its success, as well as the success of other expansive groups of mammals. As part of an

  3. The elliptic genus and Hidden symmetry

    International Nuclear Information System (INIS)

    Jaffe, A.

    2001-01-01

    We study the elliptic genus (a partition function) in certain interacting, twist quantum field theories. Without twists, these theories have N=2 supersymmetry. The twists provide a regularization, and also partially break the supersymmetry. In spite of the regularization, one can establish a homotopy of the elliptic genus in a coupling parameter. Our construction relies on a priori estimates and other methods from constructive quantum field theory; this mathematical underpinning allows us to justify evaluating the elliptic genus at one endpoint of the homotopy. We obtain a version of Witten's proposed formula for the elliptic genus in terms of classical theta functions. As a consequence, the elliptic genus has a hidden SL(2,Z) symmetry characteristic of conformal theory, even though the underlying theory is not conformal. (orig.)

  4. Higher rank BN-theory for curves of genus 4

    OpenAIRE

    Lange, H.; Newstead, P. E.

    2015-01-01

    Higher rank Brill-Noether theory is completely known for curves of genus $\\leq 3$. In this paper, we investigate the theory for curves of genus 4. Some of our results apply to curves of arbitrary genus.

  5. Estructura genética de un grupo de capibaras, Hydrochoerus hydrochaeris (Rodentia: Hydrocheridae en los Llanos orientales colombianos

    Directory of Open Access Journals (Sweden)

    Adriana Maldonado-Chaparro

    2011-12-01

    Full Text Available Los capibaras son los roedores más grandes del mundo, sin embargo, no se han realizado estudios genético poblacionales exhaustivos con ellos. En el presente trabajo se analizó la estructura genética de una manada de 31 capibaras (Hydrochoerus hydrochaeris muestreada en Hato Corozal, Departamento de Casanare en los Llanos Orientales de Colombia, mediante cinco marcadores microsatelitales. La diversidad genética se determinó en 0.61 y un número promedio de alelos de 5.2, lo cual se puede considerar medio-bajo para este tipo de marcadores. De los cinco marcadores empleados, tres mostraron proporciones genotípicas en concordancia con lo esperado en equilibrio Hardy-Weinberg, mientras que un marcador mostró un exceso significativo de homocigotos y otro un exceso significativo de heterocigotos. No se encontraron diferencias significativas para esos cinco marcadores entre machos y hembras de la manada muestreada. La aplicación de diferentes procedimientos para detectar posibles cambios demográficos históricos (expansiones poblacionales o cuellos de botella mostró claramente que la población analizada ha pasado por un cuello de botella extremadamente fuerte en épocas recientes. La limitada variabilidad genética encontrada y la fuerte evidencia de que la manada estudiada ha pasado por un cuello de botella reciente es probablemente el resultado de la cacería ilegal.Genetic structure of a group of capybaras, Hydrochoerus hydrochaeris (Rodentia: Hydrocheridae in the Colombian Eastern Llanos. The capybaras are the biggest rodents in the world but, however, there are not extensive population genetics studies on them. In the current work, we studied the genetic structure of a troop of 31 capybaras (Hydrochoerus hydrochaeris sampled in Hato Corozal, Casanare Department at the Colombian Eastern Llanos, by means of five microsatellite markers. The gene diversity was 0.61 and the average allele number was 5.2, which is a medium-low level for

  6. Suprafamilial relationships among Rodentia and the phylogenetic effect of removing fast-evolving nucleotides in mitochondrial, exon and intron fragments

    Directory of Open Access Journals (Sweden)

    Arnal Véronique

    2008-11-01

    Castorimorpha (Castoridae + Geomyoidea. The second suprafamilial clustering identified a novel association between the Sciuromorpha (Gliridae + (Sciuridae + Aplodontidae and the Hystricomorpha (Ctenodactylidae + Hystricognathi which together represents the earliest dichotomy among Rodentia. Molecular time estimates using a relaxed Bayesian molecular clock dates the appearance of the five suborders nearly contemporaniously at the KT boundary and this is congruent with suggestions of an early explosion of rodent diversity. Based on these newly proposed phylogenetic relationships, the evolution of the zygomasseteric pattern that has been used for a long time in rodent systematics is evaluated.

  7. Genomic Diversity in the Genus of Aspergillus

    DEFF Research Database (Denmark)

    Rasmussen, Jane Lind Nybo

    Aspergillus is a highly important genus of saprotrophic filamentous fungi. It is a very diverse genus that is inextricably intertwined with human a↵airs on a daily basis, holding species relevant to plant and human pathology, enzyme and bulk chemistry production, food and beverage biotechnology......, and scientific model organisms. The phenotypic diversity in this genus is extraordinary and identifying the genetic basis for this diversity has great potential for academia and industry. When the genomic era began for Aspergillus in 2005 with the genome sequences of A. nidulans, A. oryzae and A. fumigatus...

  8. Infinite genus surfaces and irrational polygonal billiards

    OpenAIRE

    Valdez, Ferrán

    2009-01-01

    We prove that the natural invariant surface associated with the billiard game on an irrational polygonal table is homeomorphic to the Loch Ness monster, that is, the only orientable infinite genus topological real surface with exactly one end.

  9. Genus Pouteria: chemistry and biological activity

    Directory of Open Access Journals (Sweden)

    Cíntia A. M. Silva

    Full Text Available The genus Pouteria belongs to the family Sapotaceae and can be widely found around the World. These plants have been used as building material, as food, because the eatable fruits, as well as remedies in folk medicine. Some biological activities have been reported to species of this genus such as antioxidant, anti-inflammatory, antibacterial and antifungal. However, the real potential of this genus as source of new drugs or phytomedicines remains unknown. Therefore, a review of the so far known chemical composition and biological activities of this genus is presented to stimulate new studies about the species already reported moreover that species have no reference about chemistry or biological activities could be found until now.

  10. Phylogeny and taxonomy of the genus Gliocephalotrichum

    NARCIS (Netherlands)

    Lombard, L.; Serrato-Diaz, L. M.; Cheewangkoon, R.; French-Monar, R. D.; Decock, C.; Crous, P. W.

    Species in the genus Gliocephalotrichum (= Leuconectria) (Hypocreales, Nectriaceae) are soilborne fungi, associated with post-harvest fruit spoilage of several important tropical fruit crops. Contemporary taxonomic studies of these fungi have relied on morphology and DNA sequence comparisons of the

  11. Phylogeny and taxonomy of the genus Gliocephalotrichum

    NARCIS (Netherlands)

    Lombard, L.; Serrato-Diaz, L.M.; Cheewangkoon, R.; French-Monar, R.D.; Decock, C.; Crous, P.W.

    2014-01-01

    Species in the genus Gliocephalotrichum (= Leuconectria) (Hypocreales, Nectriaceae) are soilborne fungi, associated with post-harvest fruit spoilage of several important tropical fruit crops. Contemporary taxonomic studies of these fungi have relied on morphology and DNA sequence comparisons of the

  12. Cladistic relationships within the genus Cinnamomum (Lauraceae ...

    African Journals Online (AJOL)

    Cladistic relationships within the genus Cinnamomum (Lauraceae) in Taiwan based on analysis of leaf morphology and inter-simple sequence repeat (ISSR) and internal transcribed spacer (ITS) molecular markers.

  13. Revision of the African genus Uvariastrum (Annonaceae).

    Science.gov (United States)

    Couvreur, Thomas L P

    2014-01-01

    The genus Uvariastrum (Annonaceae) is restricted to continental Africa and is characterized by sepals with folded margins, few carpels and numerous stamens. The genus is mainly found in the tropical lowland rain forests of Africa, with one species growing in a drier woodland habitat. The species name Uvariastrum pynaertii De Wild is reduced into synonymy with Uvariastrum zenkeri Engl. & Diels. Uvaraistrum neglectum Paiva and Uvariastrum modestum Dielsare transferred to the genus Uvaria leading to two new combinations: Uvaria modesta (Diels) Couvreur, comb. nov. and Uvaria paivana Couvreur, nom. nov. Five species are currently recognized in Uvariastrum. The present revision, the first of the genus for over 100 years, provides an overview of previously published information and discussions on morphology, taxonomy and palynology. Preliminary conservation status assessments are provided for each species, as well as diagnostic keys for fruiting and flowering material as well as detailed species descriptions. Furthermore, all species are illustrated by line drawings and all species are mapped.

  14. Witten Genus and String Complete Intersections

    OpenAIRE

    Chen, Qingtao; Han, Fei

    2006-01-01

    In this note, we prove that the Witten genus of nonsingular string complete intersections in product of complex projective spaces vanishes. Our result generalizes a known result of Landweber and Stong (cf. [HBJ]).

  15. The genus Hafnia: from soup to nuts.

    Science.gov (United States)

    Janda, J Michael; Abbott, Sharon L

    2006-01-01

    The genus Hafnia, a member of the family Enterobacteriaceae, consists of gram-negative bacteria that are occasionally implicated in both intestinal and extraintestinal infections in humans. Despite the fact that the genus currently contains only a single species (H. alvei), more extensive phylogenetic depth (two or more species) is apparent based upon DNA relatedness and 16S rRNA gene sequencing studies. Hafnia causes a variety of systemic infections, including septicemia and pneumonia; however, its role as a gastrointestinal pathogen is controversial. Many of the data supporting a role for hafniae as enteric pathogens were incorrectly attributed to this genus rather than to the actual pathogen, Escherichia albertii. There are numerous gaps in our understanding of this genus, including ecologic habitats and population genetics, disease-producing role in animals, phenetic and genetic methods useful in distinguishing genomospecies within the H. alvei complex, and bona fide pathogenicity factors.

  16. Leucosphaera, a new genus of the Pseudeurotiaceae

    NARCIS (Netherlands)

    Arx, von J.A.; Mukerji, K.G.; Singh, N.

    1978-01-01

    In the course of a study of herbivore dung collected in the Zoological Garden in Delhi, an ascomycete was observed and isolated which could not be accomodated in any known genus. It is therefore described below.

  17. A Brief Chronicle of the Genus Cordyceps Fr., the Oldest Valid Genus in Cordycipitaceae (Hypocreales, Ascomycota)

    OpenAIRE

    Shrestha, Bhushan; Tanaka, Eiji; Han, Jae-Gu; Oh, Junsang; Han, Sang-Kuk; Lee, Kang-Hyo; Sung, Gi-Ho

    2014-01-01

    The earliest pre-Linnaean fungal genera are briefly discussed here with special emphasis on the nomenclatural connection with the genus Cordyceps Fr. Since its valid publication under the basidiomycetous genus Clavaria Vaill. ex L. (Clavaria militaris L. Sp. Pl. 2:1182, 1753), the genus Cordyceps has undergone nomenclatural changes in the post-Linnaean era, but has stood firmly for approximately 200 years. Synonyms of Cordyceps were collected from different literature sources and analyzed bas...

  18. Kops genus - en værkstedsrapport

    DEFF Research Database (Denmark)

    Gudiksen, Asgerd

    2008-01-01

     Inden for Ømålsområdet optræder ordet kop både i genus femininum, masku­linum og neutrum. På Sjælland, hvor trekønssystemet er under af­vikling, kan ordet desuden være genus commune. Der kan konstateres en vis dialektgeografisk fordeling af de tre (fire) genera, men især på Sjælland er...

  19. Remarks on superstring amplitudes in higher genus

    International Nuclear Information System (INIS)

    Salvati Manni, Riccardo

    2008-01-01

    Very recently, Grushevsky continued D'Hoker and Phong's program of finding the chiral superstring measure from first principles by constructing modular forms satisfying certain factorization constraints. He has proposed an ansatz in genus 4 and conjectured a possible formula for the superstring measure in any genus, subject to the condition that certain modular forms admit holomorphic roots. In this note we want to give some evidence that Grushevsky's approach seems to be very fruitful

  20. The Genus Hafnia: from Soup to Nuts

    OpenAIRE

    Janda, J. Michael; Abbott, Sharon L.

    2006-01-01

    The genus Hafnia, a member of the family Enterobacteriaceae, consists of gram-negative bacteria that are occasionally implicated in both intestinal and extraintestinal infections in humans. Despite the fact that the genus currently contains only a single species (H. alvei), more extensive phylogenetic depth (two or more species) is apparent based upon DNA relatedness and 16S rRNA gene sequencing studies. Hafnia causes a variety of systemic infections, including septicemia and pneumonia; howev...

  1. A taxonomic revision of the Pleistocene Hystrix (Hystricidae, Rodentia) from Eurasia with notes on the evolution of the family

    NARCIS (Netherlands)

    Weers, van D.J.

    2005-01-01

    Measurements of many hundreds of the high-crowned cheek teeth of Hystrix specimens from the Euro-Asiatic Pleistocene in the collections of European and Asiatic institutions have been compared with extant species for a revision of the genus. A review is given about the extant genera and species of

  2. Genomic diversity within the haloalkaliphilic genus Thioalkalivibrio.

    Directory of Open Access Journals (Sweden)

    Anne-Catherine Ahn

    Full Text Available Thioalkalivibrio is a genus of obligate chemolithoautotrophic haloalkaliphilic sulfur-oxidizing bacteria. Their habitat are soda lakes which are dual extreme environments with a pH range from 9.5 to 11 and salt concentrations up to saturation. More than 100 strains of this genus have been isolated from various soda lakes all over the world, but only ten species have been effectively described yet. Therefore, the assignment of the remaining strains to either existing or novel species is important and will further elucidate their genomic diversity as well as give a better general understanding of this genus. Recently, the genomes of 76 Thioalkalivibrio strains were sequenced. On these, we applied different methods including (i 16S rRNA gene sequence analysis, (ii Multilocus Sequence Analysis (MLSA based on eight housekeeping genes, (iii Average Nucleotide Identity based on BLAST (ANIb and MUMmer (ANIm, (iv Tetranucleotide frequency correlation coefficients (TETRA, (v digital DNA:DNA hybridization (dDDH as well as (vi nucleotide- and amino acid-based Genome BLAST Distance Phylogeny (GBDP analyses. We detected a high genomic diversity by revealing 15 new "genomic" species and 16 new "genomic" subspecies in addition to the ten already described species. Phylogenetic and phylogenomic analyses showed that the genus is not monophyletic, because four strains were clearly separated from the other Thioalkalivibrio by type strains from other genera. Therefore, it is recommended to classify the latter group as a novel genus. The biogeographic distribution of Thioalkalivibrio suggested that the different "genomic" species can be classified as candidate disjunct or candidate endemic species. This study is a detailed genome-based classification and identification of members within the genus Thioalkalivibrio. However, future phenotypical and chemotaxonomical studies will be needed for a full species description of this genus.

  3. Genomic diversity within the haloalkaliphilic genus Thioalkalivibrio

    Science.gov (United States)

    Ahn, Anne-Catherine; Meier-Kolthoff, Jan P.; Overmars, Lex; Richter, Michael; Woyke, Tanja; Sorokin, Dimitry Y.

    2017-01-01

    Thioalkalivibrio is a genus of obligate chemolithoautotrophic haloalkaliphilic sulfur-oxidizing bacteria. Their habitat are soda lakes which are dual extreme environments with a pH range from 9.5 to 11 and salt concentrations up to saturation. More than 100 strains of this genus have been isolated from various soda lakes all over the world, but only ten species have been effectively described yet. Therefore, the assignment of the remaining strains to either existing or novel species is important and will further elucidate their genomic diversity as well as give a better general understanding of this genus. Recently, the genomes of 76 Thioalkalivibrio strains were sequenced. On these, we applied different methods including (i) 16S rRNA gene sequence analysis, (ii) Multilocus Sequence Analysis (MLSA) based on eight housekeeping genes, (iii) Average Nucleotide Identity based on BLAST (ANIb) and MUMmer (ANIm), (iv) Tetranucleotide frequency correlation coefficients (TETRA), (v) digital DNA:DNA hybridization (dDDH) as well as (vi) nucleotide- and amino acid-based Genome BLAST Distance Phylogeny (GBDP) analyses. We detected a high genomic diversity by revealing 15 new “genomic” species and 16 new “genomic” subspecies in addition to the ten already described species. Phylogenetic and phylogenomic analyses showed that the genus is not monophyletic, because four strains were clearly separated from the other Thioalkalivibrio by type strains from other genera. Therefore, it is recommended to classify the latter group as a novel genus. The biogeographic distribution of Thioalkalivibrio suggested that the different “genomic” species can be classified as candidate disjunct or candidate endemic species. This study is a detailed genome-based classification and identification of members within the genus Thioalkalivibrio. However, future phenotypical and chemotaxonomical studies will be needed for a full species description of this genus. PMID:28282461

  4. Genomic diversity within the haloalkaliphilic genus Thioalkalivibrio.

    Science.gov (United States)

    Ahn, Anne-Catherine; Meier-Kolthoff, Jan P; Overmars, Lex; Richter, Michael; Woyke, Tanja; Sorokin, Dimitry Y; Muyzer, Gerard

    2017-01-01

    Thioalkalivibrio is a genus of obligate chemolithoautotrophic haloalkaliphilic sulfur-oxidizing bacteria. Their habitat are soda lakes which are dual extreme environments with a pH range from 9.5 to 11 and salt concentrations up to saturation. More than 100 strains of this genus have been isolated from various soda lakes all over the world, but only ten species have been effectively described yet. Therefore, the assignment of the remaining strains to either existing or novel species is important and will further elucidate their genomic diversity as well as give a better general understanding of this genus. Recently, the genomes of 76 Thioalkalivibrio strains were sequenced. On these, we applied different methods including (i) 16S rRNA gene sequence analysis, (ii) Multilocus Sequence Analysis (MLSA) based on eight housekeeping genes, (iii) Average Nucleotide Identity based on BLAST (ANIb) and MUMmer (ANIm), (iv) Tetranucleotide frequency correlation coefficients (TETRA), (v) digital DNA:DNA hybridization (dDDH) as well as (vi) nucleotide- and amino acid-based Genome BLAST Distance Phylogeny (GBDP) analyses. We detected a high genomic diversity by revealing 15 new "genomic" species and 16 new "genomic" subspecies in addition to the ten already described species. Phylogenetic and phylogenomic analyses showed that the genus is not monophyletic, because four strains were clearly separated from the other Thioalkalivibrio by type strains from other genera. Therefore, it is recommended to classify the latter group as a novel genus. The biogeographic distribution of Thioalkalivibrio suggested that the different "genomic" species can be classified as candidate disjunct or candidate endemic species. This study is a detailed genome-based classification and identification of members within the genus Thioalkalivibrio. However, future phenotypical and chemotaxonomical studies will be needed for a full species description of this genus.

  5. The genus Isodon (Schrad. ex Benth. Spach in Africa and a new genus Rabdosiella Codd (Lamiaceae

    Directory of Open Access Journals (Sweden)

    L. E. Codd

    1984-12-01

    Full Text Available The typification of the genus Isodon (Schrad. ex Benth. Spach and its occurrence in Africa are discussed; an allied genus Rabdosiella Codd is described and the combinations R. calycina (Benth. Codd and R. ternifolia (D.Don Codd (the latter an Indian species are effected.

  6. Taxonomy and Chemotaxonomy of the Genus Hypericum.

    Science.gov (United States)

    Crockett, Sara L; Robson, Norman K B

    2011-01-01

    The genus Hypericum L. (St. John's Wort, Hypericaceae) includes, at the most recent count, 469 species that are either naturally occurring on, or which have been introduced to, every continent in the world, except Antarctica. These species occur as herbs, shrubs, and infrequently trees, and are found in a variety of habitats in temperate regions and in high mountains in the tropics, avoiding only zones of extreme aridity, temperature and/or salinity. Monographic work on the genus has resulted in the recognition and description of 36 taxonomic sections, delineated by specific combinations of morphological characteristics and biogeographic distribution ranges. Hypericum perforatum L. (Common St. John's wort, section Hypericum), one of the best-known members of the genus, is an important medicinal herb of which extracts are taken for their reported activity against mild to moderate depression. Many other species have been incorporated in traditional medicine systems in countries around the world, or are sold as ornamentals. Several classes of interesting bioactive secondary metabolites, including naphthodianthrones (e.g. hypericin and pseudohypericin), flavonol glycosides (e.g. isoquercitrin and hyperoside), biflavonoids (e.g. amentoflavone), phloroglucinol derivatives (e.g. hyperforin and adhyperforin) and xanthones have been identified from members of the genus. A general overview of the taxonomy of the genus and the distribution of relevant secondary metabolites is presented.

  7. The genus Gymnospermium (Berberidaceae) in the Balkans

    DEFF Research Database (Denmark)

    Tan, Kit; Shuka, Lulezim; Siljak-Yakovlev, Sonja

    2011-01-01

    A revision of the genus Gymnospermium (Berberidaceae) in the Balkan Peninsula is carried out. Three species are recognised. Gymnospermium maloi is described as a new species from Mt. Picari in Gjirokastra district, southern Albania. It is compared with the closely related G. scipetarum which has...... has been reported for other members of the genus. The nuclear DNA content (2C-value) of all three species was determined. The genome size of G. maloi is 29.44 (± 0.47) pg, for G. scipetarum (chromosome number still unknown) 29.55 (± 1.35) pg, and for G. peloponnesiacum (2n = 2x = 16) 31.93 (± 2.38) pg....... These values are the first genome size measurements for the genus. All three species are mapped and fully illustrated. A key to the European species is also presented....

  8. Revision of monotypic genus Llavea (Cryptogrammoideae: Pteridaceae

    Directory of Open Access Journals (Sweden)

    Mónica Palacios-Rios

    2016-12-01

    Full Text Available Llavea Lag. is a genus of Cryptogrammoideae (Pteridaceae, whose only species is distributed from southern United States and Mexico to Guatemala and Costa Rica, although it lives mainly in Mesoamerica, inhabiting preferably calcicolous habitats associated with forests and mountains. The genus is easily recognized by the presence of fertile leaves hemi-dimorphic, with the fertile apical portion with longer and narrower segments than the sterile ones, with strongly revolute margin, and rhizome scales bicolorous, shiny, and black. This paper presents a revision of the genus, nomenclatural issues are resolved, and and palynological morphological diversity are reviewed, as well as its distribution, phenology, ecology, and applications, based on field and herbarium specimens studies. In addition, two names related to Llavea, Allosorus karwinskii Kunze and Ceratodactylis osmundioides J. Sm., were lectotypified.

  9. The genus curve of the Abell clusters

    Science.gov (United States)

    Rhoads, James E.; Gott, J. Richard, III; Postman, Marc

    1994-01-01

    We study the topology of large-scale structure through a genus curve measurement of the recent Abell catalog redshift survey of Postman, Huchra, and Geller (1992). The structure is found to be spongelike near median density and to exhibit isolated superclusters and voids at high and low densities, respectively. The genus curve shows a slight shift toward 'meatball' topology, but remains consistent with the hypothesis of Gaussian random phase initial conditions. The amplitude of the genus curve corresponds to a power-law spectrum with index n = 0.21(sub -0.47 sup +0.43) on scales of 48/h Mpc or to a cold dark matter power spectrum with omega h = 0.36(sub -0.17 sup +0.46).

  10. Identification and nomenclature of the genus Penicillium

    DEFF Research Database (Denmark)

    Visagie, C.M.; Houbraken, J.; Frisvad, Jens Christian

    2014-01-01

    Penicillium is a diverse genus occurring worldwide and its species play important roles as decomposers of organic materials and cause destructive rots in the food industry where they produce a wide range of mycotoxins. Other species are considered enzyme factories or are common indoor air allergens....... Although DNA sequences are essential for robust identification of Penicillium species, there is currently no comprehensive, verified reference database for the genus. To coincide with the move to one fungus one name in the International Code of Nomenclature for algae, fungi and plants, the generic concept...... of accepted species in Penicillium. The genus currently contains 354 accepted species, including new combinations for Aspergillus crystallinus, A. malodoratus and A. paradoxus, which belong to Penicillium section Paradoxa. To add to the taxonomic value of the list, we also provide information on each accepted...

  11. Therapeutic value of the genus Alpinia, Zingiberaceae

    Directory of Open Access Journals (Sweden)

    Cristiane P. Victório

    2011-02-01

    Full Text Available Plants containing bioactive substances have increasingly become the object of research studies, particularly those plants with therapeutic value. Many species of the genus Alpinia provide a variety of medicinal properties, such as, Alpinia zerumbet (Pers. Burtt et Smith and A. purpurata (Vieill K. Schum, which have a significant presence in Brazil. These species have been commercialized in the food and cosmetic industries. However, their greatest importance arises from the medicinal properties of their essential oils containing flavonoids, terpenoids and kavalactones which have been used in folk medicine to treat, for example, arterial hypertension and inflammatory processes. In addition, such species are also used in multidisciplinary studies, including phytochemistry, ethnobotany and biology, indicating the key pharmacological role of this genus in everyday life. Therefore, this work aims to present a bibliographic review of the genus Alpinia and its significance in therapeutic applications.

  12. Evolutionary history of the thicket rats (genus Grammomys) mirrors the evolution of African forests since late Miocene

    Czech Academy of Sciences Publication Activity Database

    Bryja, Josef; Šumbera, R.; Kerbis Peterhans, J. C.; Aghová, Tatiana; Bryjová, Anna; Mikula, Ondřej; Nicolas, V.; Denys, C.; Verheyen, E.

    2017-01-01

    Roč. 44, č. 1 (2017), s. 182-194 ISSN 0305-0270 Institutional support: RVO:68081766 Keywords : Arvicanthini * coastal forests * late Miocene * lowland forests * mountain forests * phylogeography * Plio-Pleistocene climate changes * Rodentia * tropical Africa Subject RIV: EG - Zoology OBOR OECD: Ecology Impact factor: 4.248, year: 2016

  13. El aparato masticador del género extinto Actenomys Burmeister, 1888 (Rodentia, Ctenomyidae: inferencias sobre su modo de vida

    Directory of Open Access Journals (Sweden)

    Moreira, G. J.

    2000-04-01

    Full Text Available The genus Actenomys is registered from Plioceno sediments of Buenos Aires province, Argentina. Anatomy of skull and dentition of the genus is described, giving special emphasis to the origin and insertion points of the masticatory musculature. Actenomys is compared with the extant fossorial rodent of the genus Ctenomys, and the development of the masticatory muscles and their degree of functionality are inferred. It is concluded that Actenomys presents a less robust skull, with a masticatory musculature in agreement and incisives with great procumbency. This evidence could explain a possible adaptation of Actenomys to dig using the incisives and an adaptation to live in habitats of higher humidity than the extant forms.Se describe la anatomía cráneo-dentaria del género Actenomys, registrado en sedimentos del Plioceno de la provincia de Buenos Aires (República Argentina, con especial énfasis los puntos de origen e inserción de la musculatura masticatoria; se lo compara con el roedor fosorial viviente del género Ctenomys, infiriéndose el desarrollo de los músculos masticatorios y su grado de funcionalidad. Se concluye que Actenomys presenta un cráneo menos robusto, con una musculatura masticatoria acorde e incisivos procumbentes, lo que podría explicar una posible adaptación para cavar con los mismos, y que estaría adaptado a vivir en ambientes con un porcentaje de humedad mayor que las formas actuales.

  14. Polyphasic taxonomy of the genus Talaromyces

    DEFF Research Database (Denmark)

    Yilmaz, N.; Visagie, C.M.; Houbraken, J.

    2014-01-01

    The genus Talaromyces was described by Benjamin in 1955 as a sexual state of Penicillium that produces soft walled ascomata covered with interwoven hyphae. Phylogenetic information revealed that Penicillium subgenus Biverticillium and Talaromyces form a monophyletic clade distinct from the other...... a monograph on Talaromyces applying a polyphasic species concept, including morphological, molecular and physiological characters. Based on an ITS, BenA and RPB2 multigene phylogeny, we propose a new sectional classification for the genus, placing the 88 accepted species into seven sections, named sections...

  15. Una nueva especie del género Hoplopleura Enderlein, 1904 (Anoplura, Hoplopleuridae parásita de Andinomys edax (Rodentia, Cricetidae

    Directory of Open Access Journals (Sweden)

    González, A.

    1996-12-01

    Full Text Available The authors described a new species Hoplopleura zentaensi sp. n. based on specimens collected on Andinomys edax Thomas, l902, from Sierra de Zenta, Jujuy province, Argentina. Descriptions involve the holotype female; three nymphal instar, external architecture of eggs and sites of oviposition, providing differences with its close relative Hoplopleura hirsuta Ferris, l916 and Hoplopleura oxymycteri Ferris, l921. Comments on distribution of these species on their hosts are presented and they are included in the “erratica” group.Describimos en esta contribución a Hoplopleura zentaensi sp. n., a partir de la hembra, sus tres estadios ninfales y las características coriónicas externas del huevo de la referida especie parásita de Andinomys edax Thomas, 1902 (Rodentia, Cricetidae, capturado en Sierra de Zenta, Jujuy, Argentina. Hoplopleura zentaensi sp. n. es afín a Hoplopleura hirsuta Ferris, 1916 y de Hoplopleura oxymycteri Ferris, 1921, integrando junto a estas especies el grupo “erratica”.

  16. New species of Aspiculuris (Nematoda: Heteroxynematidae), parasite of Mus musculus (Rodentia: Muridae), from Hidalgo, Mexico Una nueva especie de Aspiculuris (Nematoda: Heteroxynematidae), parásito de Mus musculus (Rodentia: Muridae), de Hidalgo, México

    OpenAIRE

    Jorge Falcón-Ordaz; Griselda Pulido-Flores; Scott Monks

    2010-01-01

    Aspiculuris huascaensis n. sp. was found in the intestine of Mus musculus collected from 2 localities in Hidalgo, Mexico, and is described herein. The new species possesses cervical alae abruptly interrupted at mid-length of esophageal bulb form an acute angle, distinguishing it from 5 of the 17 species in the genus. The new species is differentiated from 11 of the remaining species by having cervical alae that form an acute angle and end at mid-length of the esophageal bulb. Aspiculuris huas...

  17. Some genus 3 curves with many points

    NARCIS (Netherlands)

    Auer, R; Top, J; Fieker, C; Kohel, DR

    2002-01-01

    We explain a naive approach towards the problem of finding genus 3 curves C over any given finite field F-q of odd characteristic, with a number of rational points close to the Hasse-Weil-Serre upper bound q+1+3[2rootq]. The method turns out to be successful at least in characteristic 3.

  18. The genus Gymnospermium (Berberidaceae) in the Balkans

    DEFF Research Database (Denmark)

    Tan, Kit; Shuka, Lulezim; Siljak-Yakovlev, Sonja

    2011-01-01

    A revision of the genus Gymnospermium (Berberidaceae) in the Balkan Peninsula is carried out. Three species are recognised. Gymnospermium maloi is described as a new species from Mt. Picari in Gjirokastra district, southern Albania. It is compared with the closely related G. scipetarum which has...

  19. The genus Malassezia and human disease

    Directory of Open Access Journals (Sweden)

    Inamadar A

    2003-07-01

    Full Text Available Sabouraud's Pityrosporum is now recognized as Malassezia. With taxonomic revision of the genus, newer species have been included. The role of this member of the normal human skin flora in different cutaneous and systemic disorders is becoming clearer. The immunological responses it induces in the human body are conflicting and their relevance to clinical features is yet to be explored.

  20. Thermoregulation of the subterranean rodent genus Bathyergus ...

    African Journals Online (AJOL)

    The thermoregulation of the largest subterranean rodent, genus Bathyergus, comprising two species, B. suillus and B. janetta,occurring in mesic and semiarid habitats respectively, was investigated and compared with that of other subterranean rodents. Both species display low resting metabolic rates and low body ...

  1. Phytochemical and Pharmacological Properties of the Genus ...

    African Journals Online (AJOL)

    Melodinus is an important genus comprising of approximately 53 species of medicinal plants (Apocynaceae). Some species have been used in Chinese folk medicine for the treatment of meningitis in children, rheumatic heart diseases, and diuresis, as well as a decongestive against migraine and sinusitis. This paper is a ...

  2. The genus Dacrydium in Malaya (Gymnospermae)

    NARCIS (Netherlands)

    Laubenfels, de David J.

    1976-01-01

    When Corner described the genus Dacrydium in Malaya in 1939 he recognized four kinds, three species and a marked variety, but he expressed considerable doubt about their distinctiveness because the available specimens showed all degrees of variation of leaves between one species and another. He

  3. Palynology of the Genus Stachytarpheta Vahl. (Verbenaceae

    Directory of Open Access Journals (Sweden)

    Olubukola ADEDEJI

    2010-12-01

    Full Text Available The exine morphology of pollen grains of Stachytarpheta indica (Linn. Vahl, Stachytarpheta cayennensis (Rich. Vahl and Stachytarpheta angustifolia (Mill. Vahl is reported. This study was carried out with a light microscope. Pollen grains from fresh anthers were collected and aceolysed. Statistical analysis used to analyse the data collected include cluster analysis, correlation analysis, similarity and distance indices. The pollen grains are spheroidal to oblate to sub-oblate in shape. They are aperturate, both colpate and porate. Tricolpate types occur most frequently, acolpate, monocolpate, bicolpate and tetracolpate types less frequently. The multicolpate and multiporate attributes in all the species indicate that the genus is not primitive in evolutionary history and this species probably, evolved around in the same time. According to the size, the pollen grains of the genus falls into groups permagna (pollen diameter 100-200 ?m and giganta (pollen diameter greater than 200 ?m. S. cayennensis and S. anguistifolia belong to group permagna and S. indica only in the group giganta. This separates S. indica from the other two species. The large pollen grain size in the genus clearly supports the fact that the flowers in the genus are more insect-and-bird pollinated than wind pollinated. The similarity and distance indices of the species showed that S. cayennensis and S. angustifolia are the closest. S. indica is closer to S. angustifolia but farther from S. cayennensis.

  4. On the genus Galidia and its species

    NARCIS (Netherlands)

    Jentink, F.A.

    1879-01-01

    In the year 1839 Is. Geoff. St. Hilaire ¹) described and figured three species of his new genus Galidia, viz: elegans, concolor and olivacea, all natives of Madagascar. It seems that Galidia olivacea has not been captured by the travellers who visited Madagascar after Bernier and Goudot: the only

  5. The genus Lolium : taxonomy and genetic resources

    NARCIS (Netherlands)

    Loos, B.P.

    1994-01-01

    Several aspects of variation within the genus Lolium, and more in detail within Lolium perenne (perennial ryegrass) have been highlighted. As the results are extensively discussed in each chapter, the general discussion is focused on two aspects of

  6. NSR superstring measures in genus 5

    NARCIS (Netherlands)

    Dunin-Barkovskiy, P.; Sleptsov, A.; Stern, A.

    2013-01-01

    Currently there are two proposed ansätze for NSR superstring measures: the Grushevsky ansatz and the OPSMY ansatz, which for genera g⩽4g⩽4 are known to coincide. However, neither the Grushevsky nor the OPSMY ansatz leads to a vanishing two-point function in genus four, which can be constructed from

  7. The Mesozoic megafossil genus Linguifolium Arber 1917

    Directory of Open Access Journals (Sweden)

    Pattemore Gary A.

    2015-12-01

    Full Text Available The plant megafossil genus Linguifolium Arber 1917 is chiefly known from the Middle and Upper Triassic of Gondwana. The range of Linguifolium extended beyond Gondwana by the Late Triassic, persisting there through the earliest Jurassic (Hettangian. The parent plants probably grew in a well-watered, canopied environment.

  8. Revision of the African genus Uvariastrum (Annonaceae

    Directory of Open Access Journals (Sweden)

    Thomas Couvreur

    2014-01-01

    Full Text Available The genus Uvariastrum (Annonaceae is restricted to continental Africa and is characterized by sepals with folded margins, few carpels and numerous stamens. The genus is mainly found in the tropical lowland rain forests of Africa, with one species growing in a drier woodland habitat. The species name U. pynaertii De Wild is reduced into synonymy with U. zenkeri Engl. & Diels. Uvaraistrum neglectum Paiva and U. modestum Diels are transferred to the genus Uvaria leading to two new combinations: Uvaria modesta (Diels Couvreur, comb. nov. and Uvaria paivana Couvreur, nom. nov.. Five species are currently recognized in Uvariastrum. The present revision, the first of the genus for over 100 years, provides an overview of previously published information and discussions on morphology, taxonomy and palynology. Preliminary conservation status assessments are provided for each species, as well as diagnostic keys for fruiting and flowering material as well as detailed species descriptions. Furthermore, all species are illustrated by line drawings and all species are mapped.

  9. Phylogenetic position of the spirochetal genus Cristispira

    DEFF Research Database (Denmark)

    Paster, B.J.; Pelletier, D.A.; Dewhirst, F.E.

    1996-01-01

    Comparative sequence analysis of 16S rRNA genes was used to determine the phylogenetic relationship of the genus Cristispira to other spirochetes. Since Cristispira organisms cannot presently be grown in vitro, 16S rRNA genes were amplified directly from bacterial DNA isolated from Cristispira a ...

  10. Thermoregulation of the subterranean rodent genus Bathyergus ...

    African Journals Online (AJOL)

    genus Bathyergus, comprising two species, B. suillus and. B. janetta, occurring in mesic and semi·arid habitats ... dunes along the north-western Cape coast, from Port Nolloth to the Orange River (De Graaff 1981). ... from a parallel circuit consisting of a replicate respirometer and gas scrubbers. Animals were deprived of ...

  11. Sarawakodendron, a new genus of Celastraceae

    NARCIS (Netherlands)

    Hou, Ding

    1967-01-01

    During my trip to Malaysia in 1966, sponsored by the Netherlands Foundation for the Advancement of Tropical Research (WOTRO), for doing field work on Anacardiaceae, a new tree genus was found in Sarawak belonging to the family Celastraceae which I have revised for the Flora Malesiana series I,

  12. Chemotaxonomy of the genus Nuxia (Buddlejaceae)

    DEFF Research Database (Denmark)

    Jensen, Søren Rosendal

    1999-01-01

    An investigation of two species of Nuxia (Buddlejaceae) showed that this genus is characterised by the presence of the eight-carbon iridoid glucoside unedoside and/or its derivatives. From N. floribunda was isolated unedoside, nuxioside (6-O-a-L-rhamnopyranosyl-unedoside) and 2''-acetyl-3...

  13. Chloothamnus, a neglected genus of Bambusaceae

    NARCIS (Netherlands)

    Henrard, J.Th.

    1936-01-01

    Chloothamnus BUSE ap. MIQUEL, Pl. Jungh. 1854, 386 — Oreiostachys GAMBLE ap. KOORDERS, Verh. Kon. Ak. Wet. 16, 1908, 657.. Hab.: Malay Archipelago. 1. C. chilianthus BUSE, l.c., type species of the genus — Schizostachyum chilianthum (BUSE) KURZ, Journ. As. Soc. Beng. 39, ii, 1870, 88 — non Melocanna

  14. A new genus of Blacinae (Hymenoptera: Braconidae)

    Science.gov (United States)

    Lester P. Gibson

    1977-01-01

    A new genus, Canalicephalus, of the subfamily Blacinae is described along with 4 new species, C. orientalis from Borneo, C. novus from New Guinea, and C. bakeri and C. mindanao, both from the Philippines. Keys are included to separate these 2 genera and the 4...

  15. The genus Kochia (Chenopodiaceae) in North America

    Science.gov (United States)

    Ge-Lin Chu; Stewart Sanderson

    2008-01-01

    The genus Kochia and Bassia with which it has been combined, of Chenopodiaceae tribe Camphorosmeae, were at one time considered to include plants native to Eurasia, Australia, and North America, and included species of both C3 and C4 photosynthetic types. This aggregate has been reduced in size by removal of a large group of C3 Australian genera and species. Because of...

  16. Records of the genus Coccygidium Saussure (Hymenoptera ...

    African Journals Online (AJOL)

    Coccygidium arabica sp. nov., (Hym., Braconidae, Agathidinae) is described from Saudi Arabia. Morphological diagnostic characters of the new species were figured and compared with those of the related species Coccygidium angostura. The genus Coccygidium Saussure is recorded for the first time from Saudi Arabia.

  17. The ITS2 of the genus Bulinus

    DEFF Research Database (Denmark)

    Jørgensen, Aslak; Stothard, J. R.; Madsen, Henry

    2013-01-01

    The freshwater snail genus Bulinus has been intensively investigated due to its role as intermediate host for trematode blood flukes that cause the debilitating disease schistosomiasis in man and livestock. Owing to taxonomic ambiguities within Bulinus, attention has often focused upon species...

  18. Conspectus of the genus Amyema Tieghem (Loranthaceae)

    NARCIS (Netherlands)

    Barlow, Bryan A.

    1992-01-01

    The Australasian/Malesian genus Amyema is reviewed. Particular attention is given to the species of the Malesian region, as a precursor to a treatment of Loranthaceae for Flora Malesiana. Amyema comprises 92 species, and is distributed from the southeast Asian mainland (Malaya, Thailand) throughout

  19. Phylogeny and taxonomy of the genus Gliocladiopsis

    NARCIS (Netherlands)

    Lombard, L.; Crous, P.W.

    2012-01-01

    Using a global set of isolates and a phylogenetic approach employing DNA sequence data from five genes (β-tubulin, histone H3, internal transcribed spacer region, 28S large subunit region and translation elongation factor 1-α), the taxonomic status of the genus Gliocladiopsis (Glionectria)

  20. Phylogeny and taxonomy of the genus Gliocladiopsis

    NARCIS (Netherlands)

    Lombard, L.; Crous, P.W.

    2012-01-01

    Using a global set of isolates and a phylogenetic approach employing DNA sequence data from five genes (ß-tubulin, histone H3, internal transcribed spacer region, 28S large subunit region and translation elongation factor 1-a), the taxonomic status of the genus Gliocladiopsis (Glionectria)

  1. Phylogenetic relationships in genus Gloriosa L.

    African Journals Online (AJOL)

    In an attempt to test the monophyly of the genus Gloriosa L., the chloroplast region trnL-trnF sequences were employed using Baeometra uniflora, Hexacyrtis dickiana, Neodregea glassii, Onixotis punctata, Onixotis stricta, Ornithoglossum parviflorum, Ornithoglossum undulatum, Ornithoglossum viride, Ornithoglossum ...

  2. The palm genus Acrocomia: Neotropical green gold

    Science.gov (United States)

    The genus Acrocomia, popularly known as macaw palm or macaúba, occurs in savanna areas and open forests of tropical America, with distribution from Central to southern South America. They are important oleaginous palm trees, due to their role in ecosystems, local economies, and their potential for b...

  3. The genus Mustelus (Family Triakidae, Order Carcharhiniformes ...

    African Journals Online (AJOL)

    spamer

    The genus Mustelus (Family Triakidae, Order. Carcharhiniformes), commonly called .... suitable for sharks with a well-defined length-at-birth. (L0). This eliminates the .... Table I: Parameter estimates using Fabens' method and standard errors (SE) and 95% confidence intervals (CI) for the Von. Bertalanffy growth model fitted ...

  4. Phylogeny of the plant genus Pachypodium (Apocynaceae

    Directory of Open Access Journals (Sweden)

    Dylan O. Burge

    2013-04-01

    Full Text Available Background. The genus Pachypodium contains 21 species of succulent, generally spinescent shrubs and trees found in southern Africa and Madagascar. Pachypodium has diversified mostly into arid and semi-arid habitats of Madagascar, and has been cited as an example of a plant group that links the highly diverse arid-adapted floras of Africa and Madagascar. However, a lack of knowledge about phylogenetic relationships within the genus has prevented testing of this and other hypotheses about the group.Methodology/Principal Findings. We use DNA sequence data from the nuclear ribosomal ITS and chloroplast trnL-F region for all 21 Pachypodium species to reconstruct evolutionary relationships within the genus. We compare phylogenetic results to previous taxonomic classifications and geography. Results support three infrageneric taxa from the most recent classification of Pachypodium, and suggest that a group of African species (P. namaquanum, P. succulentum and P. bispinosum may deserve taxonomic recognition as an infrageneric taxon. However, our results do not resolve relationships among major African and Malagasy lineages of the genus.Conclusions/Significance. We present the first molecular phylogenetic analysis of Pachypodium. Our work has revealed five distinct lineages, most of which correspond to groups recognized in past taxonomic classifications. Our work also suggests that there is a complex biogeographic relationship between Pachypodium of Africa and Madagascar.

  5. Interspecific hybridization in the genus Tulipa L.

    NARCIS (Netherlands)

    Creij, van M.G.M.

    1997-01-01

    The genus Tulipa L. comprises about 55 species. The tulip species are classified in two subgenera, Tulipa and Eriostemones, which are subdivided into five and three sections respectively. Commercial tulips are mainly cultivars

  6. The genus Alocasia (Araceae) in Australasia

    NARCIS (Netherlands)

    Hay, A.; Wise, Rosemary

    1991-01-01

    The genus Alocasia (Araceae) is revised for Australasia. Thirteen species are recognised and keyed; eleven are endemic to and one is thought to be introduced to and escaped in Papuasia; A. brisbanensis (F.M. Bailey) Domin is endemic to Australia, and is redescribed; five are new to science. The

  7. A conspectus of the genus Bhesa (Celastraceae)

    NARCIS (Netherlands)

    Hou, Ding

    1958-01-01

    In his Numerical List Wallich inserted four specific epithets in the genus Kurrimia, viz 4334 K. pulcherrima Wall., 4335 K. calophylla Wall., 4336 K. paniculata Wall., and later 7200 K.? macrophylla Wall. The latter one was provided with a question mark; it was a new combination for Itea macrophylla

  8. The genus Lophopyxis Hook. f. (Lophopyxidaceae)

    NARCIS (Netherlands)

    Sleumer, H.

    1968-01-01

    When revising the Icacinaceae from SE. Asia and Malesia recently, my interest was drawn again to the genus Lophopyxis Hook. f. Designated by its author (1887) tentatively as a member of the Euphorbiaceae, it was rejected from this family by Pax as early as 1890. Engler (1893) transferred Lophopyxis

  9. Genus Pygostolus Haliday (Hymenoptera: Braconidae: Euphorinae) new to Korea

    OpenAIRE

    Hye-Rin Lee; Tae-Ho An; Bong-Kyu Byun; Deok-Seo Ku

    2016-01-01

    The genus Pygostolus Haliday of the subfamily Euphorinae (Hymenoptera: Braconidae) with a newly recorded species, Pygostolus falcatus (Ness), is reported for the first time from Korea. Diagnosis and a photograph of the genus and species are provided.

  10. A New Genus of Macropsinae (Hemiptera: Cicadellidae) From Madagascar

    OpenAIRE

    Yang, Liyuan; Dietrich, C.H.; Zhang, Yalin

    2016-01-01

    Paragalboa acuta gen. & sp. n. is described and illustrated from Madagascar. The new genus shows morphological affinities to the Macropsini genus Galboa Distant recorded from Seychelles. A checklist of all known genera of Macropsinae is provided.

  11. A preliminary survey of the genus Buchwaldoboletus (Boletales: Boletaceae)

    Science.gov (United States)

    Beatriz Ortiz-Santana; Ernst E. Both

    2011-01-01

    Buchwaldoboletus is a small genus of about a dozen species with a world-wide distribution. The boletes of this genus are non-mycorrhizal, saprophytic and lignicolous. A preliminary survey is provided and seven new combinations are proposed.

  12. Khmeriosicyos, a new monotypic genus of Cucurbitaceae from Cambodia

    NARCIS (Netherlands)

    Wilde, de W.J.J.O.; Duyfjes, B.E.E.; Ham, van der R.W.J.M.

    2004-01-01

    A new monotypic genus from Cambodia is described. The genus is defined by a unique combination of characters and has distinct pollen features. The only species is Khmeriosicyos harmandii W.J. de Wilde & Duyfjes.

  13. Genus Phyllanthus for chronic hepatitis B virus infection

    DEFF Research Database (Denmark)

    Liu, J; Lin, Haili; McIntosh, H

    2001-01-01

    To evaluate the efficacy and safety of genus Phyllanthus for chronic hepatitis B virus (HBV) infection we performed a systematic review of randomized clinical trials. Randomized trials comparing genus Phyllanthus vs. placebo, no intervention, general nonspecific treatment, other herbal medicine...

  14. The phyletic status of the genus Planaria (Platyhelminthes, Turbellaria, Tricladida)

    NARCIS (Netherlands)

    Ball, Ian R.; Gourbault, Nicole

    1978-01-01

    The amphiatlantic distribution of the genus Planaria is incompatible with our current hypothesis of the historical biogeography of freshwater planarians. New anatomical studies suggest the possibility that the genus is not strictly monophyletic; new karyological data are strongly corroborative of

  15. Calocybella, a new genus for Rugosomyces pudicus (Agaricales, Lyophyllaceae) and emendation of the genus Gerhardtia.

    Science.gov (United States)

    Vizzini, Alfredo; Consiglio, Giovanni; Setti, Ledo; Ercole, Enrico

    2015-06-01

    Calocybella is a new genus established to accommodate Rugosomyces pudicus. Phylogenetic analyses based on a LSU-ITS sequence dataset place Calocybella sister to Gerhardtia from which it differs morphologically in the presence of clamp-connections and reddening context. The genus Gerhardtia is emended to also include taxa with smooth spores. According to our morphological analysis of voucher material, Calocybe juncicola s. auct. is shown to be Calocybella pudica.

  16. Elliptic genus of phases of N=2 theories

    OpenAIRE

    Libgober, A.

    2014-01-01

    We discuss an algebro-geometric description of Witten's phases of N=2 theories and propose a definition of their elliptic genus provided some conditions on singularities of the phases are met. For Landau-Ginzburg phase one recovers elliptic genus of LG models proposed in physics literature in early 90s. For certain transitions between phases we derive invariance of elliptic genus from an equivariant form of McKay correspondence for elliptic genus. As special cases one obtains Landau-Giznburg/...

  17. Limit groups, positive-genus towers and measure equivalence

    OpenAIRE

    Bridson, Martin R; Tweedale, Michael; Wilton, Henry

    2005-01-01

    By definition, an $\\omega$-residually free tower is positive-genus if all surfaces used in its construction are of positive genus. We prove that every limit group is virtually a subgroup of a positive-genus $\\omega$-residually free tower. By combining this with results of Gaboriau, we prove that elementarily free groups are measure equivalent to free groups.

  18. A Comprehensive review on the genus Plumbago with focus on ...

    African Journals Online (AJOL)

    Background: The genus Plumbago distributed in warm tropical regions throughout the world is the largest genus in Plumbaginaceae. Medicinal plants are characteristic to the genus Plumbago and are cultivated and utilized worldwide. Plumbago auriculata Lam. is common in South Africa and is often cultivated for its ...

  19. Modular functors are determined by their genus zero data

    DEFF Research Database (Denmark)

    Andersen, Jørgen Ellegaard; Ueno, Kenji

    2012-01-01

    We prove in this paper that the genus zero data of a modular functor determines the modular functor. We do this by establishing that the S-matrix in genus one with one point labeled arbitrarily can be expressed in terms of the genus zero information and we give an explicit formula. We do not assume...

  20. Genus Tinospora: Ethnopharmacology, Phytochemistry, and Pharmacology.

    Science.gov (United States)

    Chi, Sensen; She, Gaimei; Han, Dan; Wang, Weihua; Liu, Zhao; Liu, Bin

    2016-01-01

    The genus Tinospora includes 34 species, in which several herbs were used as traditional medicines by indigenous groups throughout the tropical and subtropical parts of Asia, Africa, and Australia. The extensive literature survey revealed Tinospora species to be a group of important medicinal plants used for the ethnomedical treatment of colds, headaches, pharyngitis, fever, diarrhea, oral ulcer, diabetes, digestive disorder, and rheumatoid arthritis. Indian ethnopharmacological data points to the therapeutic potential of the T. cordifolia for the treatment of diabetic conditions. While Tinospora species are confusing in individual ingredients and their mechanisms of action, the ethnopharmacological history of those plants indicated that they exhibit antidiabetic, antioxidation, antitumor, anti-inflammation, antimicrobial, antiosteoporosis, and immunostimulation activities. While the clinical applications in modern medicine are lacking convincing evidence and support, this review is aimed at summarizing the current knowledge of the traditional uses, phytochemistry, biological activities, and toxicities of the genus Tinospora to reveal its therapeutic potentials and gaps, offering opportunities for future researches.

  1. A holomorphic anomaly in the elliptic genus

    International Nuclear Information System (INIS)

    Murthy, Sameer

    2014-01-01

    We consider a class of gauged linear sigma models (GLSMs) in two dimensions that flow to non-compact (2,2) superconformal field theories in the infra-red, a prototype of which is the SL(2,ℝ)/U(1) (cigar) coset. We compute the elliptic genus of the GLSMs as a path-integral on the torus using supersymmetric localization. We find that the result is a Jacobi-like form that is non-holomorphic in the modular parameter τ of the torus, with mock modular behavior. This agrees with a previously-computed expression in the cigar coset. We show that the lack of holomorphicity of the elliptic genus arises from the contributions of a compact boson carrying momentum and winding excitations. This boson has an axionic shift symmetry and plays the role of a compensator field that is needed to cancel the chiral anomaly in the rest of the theory.

  2. Phytochemistry of the genus Skimmia (Rutaceae).

    Science.gov (United States)

    Epifano, Francesco; Fiorito, Serena; Genovese, Salvatore; Granica, Sebastian; Vitalini, Sara; Zidorn, Christian

    2015-07-01

    The genus Skimmia is a rich source of interesting secondary metabolites, including 20 alkaloids derived from anthranilic acid, 45 coumarins, 21 limonoids, four cholestane derivatives, six pentacyclic triterpenes, six flavonoids, and two unusual fatty acid derivatives. Skimmia is employed in folk medicine e.g. against fever, inflammations, and rheumatism. Skimmia extracts, Skimmia essential oils and pure compounds isolated from Skimmia extracts have been experimentally shown to have various bioactivities such as antioxidant, anti-inflammatory, antimicrobial, and insecticidal. In this review we discuss the exact structures of compounds isolated from members of the genus Skimmia, bioactivities of Skimmia extracts and pure compounds derived from them, and systematic implications of the patterns of occurrence of these compounds. Moreover, research gaps and interesting avenues for future research are discussed briefly. Copyright © 2015 Elsevier Ltd. All rights reserved.

  3. Genomic Characterization of the Taylorella Genus

    OpenAIRE

    H?bert, Laurent; Moumen, Bouziane; Pons, Nicolas; Duquesne, Fabien; Breuil, Marie-France; Goux, Didier; Batto, Jean-Michel; Laugier, Claire; Renault, Pierre; Petry, Sandrine

    2012-01-01

    The Taylorella genus comprises two species: Taylorella equigenitalis, which causes contagious equine metritis, and Taylorella asinigenitalis, a closely-related species mainly found in donkeys. We herein report on the first genome sequence of T. asinigenitalis, analyzing and comparing it with the recently-sequenced T. equigenitalis genome. The T. asinigenitalis genome contains a single circular chromosome of 1,638,559 bp with a 38.3% GC content and 1,534 coding sequences (CDS). While 212 CDSs ...

  4. Terpenoids from Octocorals of the Genus Pachyclavularia

    OpenAIRE

    Chang, Yu-Chia; Sheu, Jyh-Horng; Wu, Yang-Chang; Sung, Ping-Jyun

    2017-01-01

    In this paper, we reviewed natural compounds isolated from octocorals belonging to the genus Pachyclavularia, including 20 cembrane-, 39 briarane-, and eight briarellin-related diterpenoids, and one secosterol. The chemical constituents of these 68 secondary metabolites, and their names, structures, and bioactivities, along with studies of their biological activities, are summarized in this review. Based on the literature, many of these compounds possess bioactivities, including anti-inflamma...

  5. Synopsis of the genus Anopteris (Pteridophyta, Pteridaceae

    Directory of Open Access Journals (Sweden)

    A. V. Vaganov

    2016-09-01

    Full Text Available In the article a synopsis of the genus Anopteris (Prantl Diels is given. The synopsis of Anopteris includes three species. For each species, the Latin name, basionym, nomenclatural citation, synonyms, information on locus classicus, type, habitat, and distribution are given. An original key for identification of the species of Anopteris is also prepared. The localities of occurrence of each species are precisely given.

  6. Topological classification and enumeration of RNA structures by genus

    DEFF Research Database (Denmark)

    Andersen, Joergen Ellegard; Penner, Robert C.; Reidys, Christian

    2013-01-01

    To an RNA pseudoknot structure is naturally associated a topological surface, which has its associated genus, and structures can thus be classified by the genus. Based on earlier work of Harer-Zagier, we compute the generating function for the number of those structures of fixed genus and minimum...... molecules implies the existence of neutral networks of distinct molecules with the same structure of any genus. Certain RNA structures called shapes are shown to be in natural one-to-one correspondence with the cells in the Penner-Strebel decomposition of Riemann's moduli space of a surface of genus...

  7. A review on pharmacological significance of genus Jatropha (Euphorbiaceae).

    Science.gov (United States)

    Sharma, Surendra Kr; Singh, Harneet

    2012-11-01

    A number of herbs belonging to the genus Jatropha of Euphorbiaceae family are noted for their medicinal benefits. The genus Jatropha is one of the prospective biodiesel yielding crops. The plants which have been so far explored include J. curcas, J. gossypifolia, J. glandulifera, J. multifida and J. podagrica. Although, the plants of this genus are widely distributed, there is an exiguity of scientific literature proclaiming the medicinal benefits of the plants belonging to genus Jatropha. The present paper is a pragmatic approach to accrue the findings on this very significant genus.

  8. Leishmaniose cutânea na Amazônia: isolamento de Leishmania (Viannia lainsoni do roedor Agouti paca (Rodentia: Dasyproctidae, no estado do Pará, Brasil Cutaneous leishmaniasis in the Amazon Region: isolation of Leishmania (Viannia lainsoni from the rodent Agouti paca (Rodentia: Dasyproctidae in Pará State, Brazil

    Directory of Open Access Journals (Sweden)

    Fernando T. Silveira

    1991-02-01

    Full Text Available Fez-se o registro, pela primeira vez, do isolamento de Leishmania (V. lainsoni de um mamífero silvestre, o roedor Agouti paca (Rodentia: Dasyproctidae, no Estado do Pará, Brasil. As amostras do parasita foram isoladas da pele, aparentemente íntegra, de 3 espécimes desse roedor, capturados no município de Tucuruí (ilha de Tocantins, em área que seria inundada pela formação do lago da hidrelétrica construída naquele município. Nenhum isolamento foi obtido de vísceras de qualquer dos animais. A identificação das amostras de L. (V. lainsoni baseou-se na morfologia de amastigotas e promastigotas, no comportamento da infecção em "hamsters", na análise bioquímica de isoenzimas e, ainda, através de testes com anticorpos monoclonais. A natureza inaparente da infecção nos animais faz supor que o mamífero em questão possa representar um hospedeiro definitivo do parasita na região Amazônica.The isolation of Leishmania (V. lainsoni is recorded for the first time from a wild animal, the rodent Agouti paca (Rodentia: Dasyproctidae, from Pará State, north Brazil. Isolates of the parasite were made from apparently normal skin of 3 specimens of this rodent captured on the Island of Tocantins, in the municipality of Tucuruí, an area subsequently flooded in the formation of the lake associated with the Tucuruí hydroeletric dam. No isolations were made from the viscera. Identification of the parasite was in each case based on morphology of the amastigotes and promastigotes, behavior of the organism in hamsters, isoenzymes profiles and the use of monoclonal antibodies. The inapparent nature of the infection leads us to suggest that the "paca", Agouti paca, represents a primitive host of L. (V. lainsoni in the Amazon Region.

  9. Phytochemistry and pharmacognosy of the genus Acronychia.

    Science.gov (United States)

    Epifano, Francesco; Fiorito, Serena; Genovese, Salvatore

    2013-11-01

    The genus Acronychia (Rutaceae) comprise 44 species, most of which are represented by shrubs and small trees, distributed in a wide geographical area of South-Eastern Asia comprising China, India, Malaysia, Indonesia, Australia, and the islands of the western Pacific Ocean. Most of the species of the genus Acronychia have been used for centuries as natural remedies in the ethnomedical traditions of indigenous populations as anti-microbial, anti-fungal, anti-spasmodic, stomachic, anti-pyretic, and anti-haemorragic agent. Moreover fruits and aerial parts are used as food in salads and condiments, while the essential oil obtained from flowers and leaves has been employed in cosmetics production. Phytochemicals isolated from Acronychia spp. include acetophenones, quinoline and acridone alkaloids, flavonoids, cinnamic acids, lignans, coumarins, steroids, and triterpenes. The reported biological activities of the above mentioned natural compounds refer to anti-plasmodial, anti-cancer, anti-oxidant, anti-inflammatory, anti-fungal, and neuroprotective effects. The aim of this review is to examine in detail from a phytochemical and pharmacologically point of view what is reported in the current literature about the properties of phytopreparations or individual active principles obtained from plants belonging to the Acronychia genus. Copyright © 2013 Elsevier Ltd. All rights reserved.

  10. Biodegradation of chlorpyrifos by bacterial genus Pseudomonas.

    Science.gov (United States)

    Gilani, Razia Alam; Rafique, Mazhar; Rehman, Abdul; Munis, Muhammad Farooq Hussain; Rehman, Shafiq Ur; Chaudhary, Hassan Javed

    2016-02-01

    Chlorpyrifos is an organophosphorus pesticide commonly used in agriculture. It is noxious to a variety of organisms that include living soil biota along with beneficial arthropods, fish, birds, humans, animals, and plants. Exposure to chlorpyrifos may cause detrimental effects as delayed seedling emergence, fruit deformities, and abnormal cell division. Contamination of chlorpyrifos has been found about 24 km from the site of its application. There are many physico-chemical and biological approaches to remove organophosphorus pesticides from the ecosystem, among them most promising is biodegradation. The 3,5,6-trichloro-2-pyridinol (TCP) and diethylthiophosphate (DETP) as primary products are made when chlorpyrifos is degraded by soil microorganisms which further break into nontoxic metabolites as CO(2), H(2)O, and NH(3). Pseudomonas is a diversified genus possessing a series of catabolic pathways and enzymes involved in pesticide degradation. Pseudomonas putida MAS-1 is reported to be more efficient in chlorpyrifos degradation by a rate of 90% in 24 h among Pseudomonas genus. The current review analyzed the comparative potential of bacterial species in Pseudomonas genus for degradation of chlorpyrifos thus, expressing an ecofriendly approach for the treatment of environmental contaminants like pesticides. © 2015 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

  11. The genus Crataegus: chemical and pharmacological perspectives

    Directory of Open Access Journals (Sweden)

    Dinesh Kumar

    2012-10-01

    Full Text Available Traditional drugs have become a subject of world importance, with both medicinal and economical implications. A regular and widespread use of herbs throughout the world has increased serious concerns over their quality, safety and efficacy. Thus, a proper scientific evidence or assessment has become the criteria for acceptance of traditional health claims. Plants of the genus Crataegus, Rosaceae, are widely distributed and have long been used in folk medicine for the treatment of various ailments such as heart (cardiovascular disorders, central nervous system, immune system, eyes, reproductive system, liver, kidney etc. It also exhibits wide range of cytotoxic, gastroprotective, anti-inflammatory, anti-HIV and antimicrobial activities. Phytochemicals like oligomeric procyanidins, flavonoids, triterpenes, polysaccharides, catecholamines have been identified in the genus and many of these have been evaluated for biological activities. This review presents comprehensive information on the chemistry and pharmacology of the genus together with the traditional uses of many of its plants. In addition, this review discusses the clinical trials and regulatory status of various Crataegus plants along with the scope for future research in this aspect.

  12. Genus Ranges of 4-Regular Rigid Vertex Graphs.

    Science.gov (United States)

    Buck, Dorothy; Dolzhenko, Egor; Jonoska, Nataša; Saito, Masahico; Valencia, Karin

    2015-01-01

    A rigid vertex of a graph is one that has a prescribed cyclic order of its incident edges. We study orientable genus ranges of 4-regular rigid vertex graphs. The (orientable) genus range is a set of genera values over all orientable surfaces into which a graph is embedded cellularly, and the embeddings of rigid vertex graphs are required to preserve the prescribed cyclic order of incident edges at every vertex. The genus ranges of 4-regular rigid vertex graphs are sets of consecutive integers, and we address two questions: which intervals of integers appear as genus ranges of such graphs, and what types of graphs realize a given genus range. For graphs with 2 n vertices ( n > 1), we prove that all intervals [ a, b ] for all a genus ranges. For graphs with 2 n - 1 vertices ( n ≥ 1), we prove that all intervals [ a, b ] for all a genus ranges. We also provide constructions of graphs that realize these ranges.

  13. Functional differentiation of trailing and leading forelimbs during locomotion on the ground and on a horizontal branch in the European red squirrel (Sciurus vulgaris, Rodentia).

    Science.gov (United States)

    Schmidt, André

    2011-06-01

    Mammalian locomotion is characterized by the frequent use of in-phase gaits in which the footfalls of the left and right fore- or hindlimbs are unevenly spaced in time. Although previous studies have identified a functional differentiation between the first limb (trailing limb) and the second limb (leading limb) to touch the ground during terrestrial locomotion, the influence of a horizontal branch on limb function has never been explored. To determine the functional differences between trailing and leading forelimbs during locomotion on the ground and on a horizontal branch, X-ray motion analysis and force measurements were carried out in two European red squirrels (Sciurus vulgaris, Rodentia). The differences observed between trailing and leading forelimbs were minimal during terrestrial locomotion, where both limbs fulfill two functions and go through a shock-absorbing phase followed by a generating phase. During locomotion on a horizontal branch, European red squirrels reduce speed and all substrate reaction forces transmitted may be due to the reduction of vertical oscillation of the center of mass. Further adjustments during locomotion on a horizontal branch differ significantly between trailing and leading forelimbs and include limb flexion, lead intervals, limb protraction and vertical displacement of the scapular pivot. Consequently, trailing and leading forelimbs perform different functions. Trailing forelimbs function primarily as shock-absorbing elements, whereas leading forelimbs are characterized by a high level of stiffness. This functional differentiation indicates that European red squirrels 'test' the substrate for stability with the trailing forelimb, while the leading forelimb responds to or counteracts swinging or snapping branches. Copyright © 2011 Elsevier GmbH. All rights reserved.

  14. Phylogenetic relationships in the Niviventer-Chiromyscus complex (Rodentia, Muridae inferred from molecular data, with description of a new species

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    Alexander Balakirev

    2014-11-01

    Full Text Available Based on molecular data for mitochondrial (Cyt b, COI and nuclear (IRBP, GHR genes, and morphological examinations of museum specimens, we examined diversity, species boundaries, and relationships within and between the murine genera Chiromyscus and Niviventer. Phylogenetic patterns recovered demonstrate that Niviventer sensu lato is not monophyletic but instead includes Chiromyscus chiropus, the only previously recognized species of Chiropus. To maintain the genera Niviventer and Chiropus as monophyletic lineages, the scope and definition of the genus Chiromyscus is revised to include at least three distinct species: Chiromyscus chiropus (the type species of Chiromyscus, C. langbianis (previously regarded as a species of Niviventer, and a new species, described in this paper under the name C. thomasi sp. n.

  15. Nuevos datos paleontológicos del Pleistoceno en el Valle del Manzanares (Madrid, España: Los micromamíferos del yacimiento del Arenero de Arriaga

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    Sesé, Carmen

    2013-12-01

    Full Text Available The micromammals from the archaeological site of the Arenero de Arriaga from the Manzanares Valley are here described. They are the Soricomorpha: Crocidura sp. and Talpa sp., the Rodentia: Eliomys quercinus quercinus, Apodemus sp., Microtus brecciensis, Microtus arvalis, Microtus duodecimcostatus and Arvicola aff. sapidus, and the Lagomorpha: Oryctolagus cuniculus. The faunal association and the evolutionary state of Microtus brecciensis and Arvicola aff. sapidus, suggest an age of the end of the Middle Pleistocene. It also indicates the existence of different biotopes: riparian, moist and dry meadows, and forest, and a temperate climate similar to the present-day climate of the Meseta.Se describe la asociación de micromamíferos del yacimiento achelense del Arenero de Arriaga del valle del Manzanares constituida por los soricomorfos: Crocidura sp. y Talpa sp., los roedores: Eliomys quercinus quercinus, Apodemus sp., Microtus brecciensis, Microtus arvalis, Microtus duodecimcostatus y Arvicola aff. sapidus, y el lagomorfo: Oryctolagus cuniculus. La asociación faunística y el estadio evolutivo de Microtus brecciensis y Arvicola aff. sapidus, indican una edad del final del Pleistoceno Medio. La asociación de micromamíferos sugiere la existencia de varios biotopos representados: ripícola, praderas húmedas y secas, y bosque, y un clima templado similar al actual de la Meseta.

  16. Genomic characterization of the Taylorella genus.

    Science.gov (United States)

    Hébert, Laurent; Moumen, Bouziane; Pons, Nicolas; Duquesne, Fabien; Breuil, Marie-France; Goux, Didier; Batto, Jean-Michel; Laugier, Claire; Renault, Pierre; Petry, Sandrine

    2012-01-01

    The Taylorella genus comprises two species: Taylorella equigenitalis, which causes contagious equine metritis, and Taylorella asinigenitalis, a closely-related species mainly found in donkeys. We herein report on the first genome sequence of T. asinigenitalis, analyzing and comparing it with the recently-sequenced T. equigenitalis genome. The T. asinigenitalis genome contains a single circular chromosome of 1,638,559 bp with a 38.3% GC content and 1,534 coding sequences (CDS). While 212 CDSs were T. asinigenitalis-specific, 1,322 had orthologs in T. equigenitalis. Two hundred and thirty-four T. equigenitalis CDSs had no orthologs in T. asinigenitalis. Analysis of the basic nutrition metabolism of both Taylorella species showed that malate, glutamate and alpha-ketoglutarate may be their main carbon and energy sources. For both species, we identified four different secretion systems and several proteins potentially involved in binding and colonization of host cells, suggesting a strong potential for interaction with their host. T. equigenitalis seems better-equipped than T. asinigenitalis in terms of virulence since we identified numerous proteins potentially involved in pathogenicity, including hemagluttinin-related proteins, a type IV secretion system, TonB-dependent lactoferrin and transferrin receptors, and YadA and Hep_Hag domains containing proteins. This is the first molecular characterization of Taylorella genus members, and the first molecular identification of factors potentially involved in T. asinigenitalis and T. equigenitalis pathogenicity and host colonization. This study facilitates a genetic understanding of growth phenotypes, animal host preference and pathogenic capacity, paving the way for future functional investigations into this largely unknown genus.

  17. Genomic characterization of the Taylorella genus.

    Directory of Open Access Journals (Sweden)

    Laurent Hébert

    Full Text Available The Taylorella genus comprises two species: Taylorella equigenitalis, which causes contagious equine metritis, and Taylorella asinigenitalis, a closely-related species mainly found in donkeys. We herein report on the first genome sequence of T. asinigenitalis, analyzing and comparing it with the recently-sequenced T. equigenitalis genome. The T. asinigenitalis genome contains a single circular chromosome of 1,638,559 bp with a 38.3% GC content and 1,534 coding sequences (CDS. While 212 CDSs were T. asinigenitalis-specific, 1,322 had orthologs in T. equigenitalis. Two hundred and thirty-four T. equigenitalis CDSs had no orthologs in T. asinigenitalis. Analysis of the basic nutrition metabolism of both Taylorella species showed that malate, glutamate and alpha-ketoglutarate may be their main carbon and energy sources. For both species, we identified four different secretion systems and several proteins potentially involved in binding and colonization of host cells, suggesting a strong potential for interaction with their host. T. equigenitalis seems better-equipped than T. asinigenitalis in terms of virulence since we identified numerous proteins potentially involved in pathogenicity, including hemagluttinin-related proteins, a type IV secretion system, TonB-dependent lactoferrin and transferrin receptors, and YadA and Hep_Hag domains containing proteins. This is the first molecular characterization of Taylorella genus members, and the first molecular identification of factors potentially involved in T. asinigenitalis and T. equigenitalis pathogenicity and host colonization. This study facilitates a genetic understanding of growth phenotypes, animal host preference and pathogenic capacity, paving the way for future functional investigations into this largely unknown genus.

  18. The new phylogenesis of the genus Mycobacterium

    Directory of Open Access Journals (Sweden)

    Enrico Tortoli

    2015-01-01

    Full Text Available Phylogenetic knowledge of the genus Mycobacterium is based on comparative analysis of their genetic sequences. The 16S rRNA has remained for many years the only target of such analyses, but in the last few years, other housekeeping genes have been investigated and the phylogeny based on their concatenated sequences become a standard. It is now clear that the robustness of the phylogenetic analysis is strictly related to the size of the genomic target used. Whole genome sequencing (WGS is nowadays becoming widely accessible and comparatively cheap. It was decided, therefore, to use this approach to reconstruct the ultimate phylogeny of the genus Mycobacterium. Over 50 types of strains of the same number of species of Mycobacterium were sequenced using the Illumina HiSeq platform. The majority of the strains of which the whole sequence was already available in GenBank were excluded from this panel with the aim of maximizing the number of the species with genome available. Following assembling and annotation with proper software, the phylogenetic analysis was conducted with PhyloPhlAn and the pan-genome analysis pipeline. The phylogenetic three which emerged was characterized by a clear-cut distinction of slowly and rapidly growing species with the latter being more ancestral. The species of the Mycobacterium terrae complex occupied an intermediate position between rapid and slow growers. Most of the species revealed clearly related and occupied specific phylogenetic branches. Thanks to the WGS technology, the genus Mycobacterium is finally approaching its definitive location.

  19. Molecular phylogenetic study in genus Hydra.

    Science.gov (United States)

    Kawaida, Hitomi; Shimizu, Hiroshi; Fujisawa, Toshitaka; Tachida, Hidenori; Kobayakawa, Yoshitaka

    2010-11-15

    Among 8000-9000 species of Cnidaria, only several dozens of species of Hydrozoa have been found in the fresh water. Hydra is such a fresh water polyp and has been used as a good material for research in developmental biology, regeneration and pattern formation. Although the genus Hydra has only a few ten species, its distribution is cosmopolitan. The phylogenetic relationship between hydra species is fascinating from the aspect of evolutionary biology and biogeography. However, only a few molecular phylogenetic studies have been reported on hydra. Therefore, we conducted a molecular phylogenetic study of the genus Hydra based on mitochondrial and nuclear nucleotide sequences using a hydra collection that has been kept in the National Institute of Genetics (NIG) of Japan. The results support the idea that four species groups comprise the genus Hydra. Within the viridissima group (green hydra) and braueri group, genetic distances between strains were relatively large. In contrast, genetic distances between strains among the vulgaris and oligactis groups were small irrespective of their geographic distribution. The vulgaris group strains were classified at least (as far as our investigated samples) into three sub-groups, vulgaris sub-group, carnea sub-group, and H. sp. (K5 and K6) sub-group. All of the vulgaris sub-group and H. sp. (K5 and K6) sub-group strains were collected in Eurasia. The carnea sub-group strains in NIG collection were all collected in North America. A few newly collected samples in Japan, however, suggested belonging to the carnea sub-group according to the molecular phylogenic analysis. This suggests a trans-Pacific distribution of the carnea sub-group hydra. Copyright © 2010 Elsevier B.V. All rights reserved.

  20. Terpenoids from Octocorals of the Genus Pachyclavularia

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    Yu-Chia Chang

    2017-12-01

    Full Text Available In this paper, we reviewed natural compounds isolated from octocorals belonging to the genus Pachyclavularia, including 20 cembrane-, 39 briarane-, and eight briarellin-related diterpenoids, and one secosterol. The chemical constituents of these 68 secondary metabolites, and their names, structures, and bioactivities, along with studies of their biological activities, are summarized in this review. Based on the literature, many of these compounds possess bioactivities, including anti-inflammation properties, cytotoxicity, and ichthyotoxicity, suggesting that they may have the potential to be developed into biomedical agents for treatment.

  1. Operators and higher genus mirror curves

    Energy Technology Data Exchange (ETDEWEB)

    Codesido, Santiago [Département de Physique Théorique et section de Mathématiques,Université de Genève,Genève, CH-1211 (Switzerland); Gu, Jie [Laboratoire de Physique Théorique de l’École Normale Supérieure,CNRS, PSL Research University,Sorbonne Universités, UPMC, 75005 Paris (France); Mariño, Marcos [Département de Physique Théorique et section de Mathématiques,Université de Genève,Genève, CH-1211 (Switzerland)

    2017-02-17

    We perform further tests of the correspondence between spectral theory and topological strings, focusing on mirror curves of genus greater than one with nontrivial mass parameters. In particular, we analyze the geometry relevant to the SU(3) relativistic Toda lattice, and the resolved ℂ{sup 3}/ℤ{sub 6} orbifold. Furthermore, we give evidence that the correspondence holds for arbitrary values of the mass parameters, where the quantization problem leads to resonant states. We also explore the relation between this correspondence and cluster integrable systems.

  2. The genus Platychara from the Western Hemisphere

    Science.gov (United States)

    Peck, R.E.; Forester, R.M.

    1979-01-01

    The systematics of four species belonging to the genus Platychara (Charophyta) from the Western Hemisphere is discussed. Three of the species, as defined herein, occur in Cretaceous and Paleocene rocks from Mexico through South America. The type species, P. compressa (Peck and Reker) Grambast, also of Cretaceous and Paleocene age, is herein restricted to deposits north of Mexico. These latter restrictions geographically separate P. compressa and P. perlata as presently defined but the relationship between these two species is still uncertain. A new species, P. grambastii, is proposed for specimens from Maestrichtian sediments in Jamaica. ?? 1979.

  3. A review of the genus Curtisia (Curtisiaceae

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    E. YU Yembaturova

    2009-08-01

    Full Text Available A review of the monotypic southern African endemic genus Curtisia Aiton is presented. Detailed studies of the fruit and seed structure provided new evidence in support of a close relationship between the family Curtisiaceae and Comaceae. Comparisons with several other members of the Comales revealed carpological similarities to certain species of Comus s.I., sometimes treated as segregate genera Dendrobenthamia Hutch, and Benthamidia Spach. We also provide information on the history of the assegai tree, Curtisia dentata (Burm.f. C.A.Sm. and its uses, as well as a formal taxonomic revision, including nomenclature, typification, detailed description and geographical distribution.

  4. The genus Bryoerythrophyllum (Musci, Pottiaceae in Antarctica

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    Sollman Philip

    2015-07-01

    Full Text Available Antarctic material of the genus Bryoerythrophyllum P. C. Chen was studied from all specimens present in KRAM. Bryoerythrophyllum recurvirostrum (Hedw. P. C. Chen var. antarcticum L. I. Savicz & Smirnova is treated as a distinct species: B. antarcticum (L. I. Savicz & Smirnova P. Sollman, stat. nov. Three species are now known in the Antarctic region: B. antarcticum, B. recurvirostrum and B. rubrum (Jur. ex Geh. P. C. Chen. Bryoerythrophyllum rubrum is reported for the first time from the Antarctic. It is a bipolar species. A key to the taxa is given. These species are described and briefly discussed, with notes on illustrations, reproduction, habitat, world range, distribution and elevation in Antarctica.

  5. Double genus expansion for general Ω background

    Science.gov (United States)

    Prudenziati, Andrea

    2016-07-01

    We will show how the refined holomorphic anomaly equation obeyed by the Nekrasov partition function at generic 𝜖1, 𝜖2 values becomes compatible, in a certain two-parameter expansion, with the assumption that both parameters are associated to genus counting. The underlying worldsheet theory will be analyzed and constrained in various ways, and we will provide both physical interpretation and some alternative evidence for this model. Finally, we will use the Gopakumar-Vafa formulation for the refined topological string in order to give a more quantitative description.

  6. Heterogeneity in the genus Allovahlkampfia and the description of the new genus Parafumarolamoeba (Vahlkampfiidae; Heterolobosea).

    Science.gov (United States)

    Geisen, Stefan; Bonkowski, Michael; Zhang, Junling; De Jonckheere, Johan F

    2015-08-01

    Heterolobosean amoebae are common and diverse members of soil protist communities. In this study, we isolated seven strains of amoebae from soil samples taken in Tibet (at high altitude), Sardinia and the Netherlands, all resembling to belong to a similar heterolobosean morphospecies. However, sequences of the small subunit (SSU) rDNA and internal transcribed spacers, including the 5.8S rDNA, revealed a high heterogeneity in the genus Allovahlkampfia to which six of the isolates belong. Some unnamed strains, of which the sequences had been published before, are also included within the genus Allovahlkampfia. One Allovahlkampfia isolated in the Netherlands harbors a twin-ribozyme, containing a His-Cys box, similar to the one found in strain BA of Allovahlkampfia. The other SSU rDNA sequence grouped in phylogenetic analyses with sequences obtained in environmental sequencing studies as sister to the genus Fumarolamoeba. This phylogenetic placement was supported by analyses of the 5.8S rDNA leading us to describe it as a new genus Parafumarolamoeba. Copyright © 2015 Elsevier GmbH. All rights reserved.

  7. A Brief Chronicle of the Genus Cordyceps Fr., the Oldest Valid Genus in Cordycipitaceae (Hypocreales, Ascomycota)

    Science.gov (United States)

    Tanaka, Eiji; Han, Jae-Gu; Oh, Junsang; Han, Sang-Kuk; Lee, Kang-Hyo

    2014-01-01

    The earliest pre-Linnaean fungal genera are briefly discussed here with special emphasis on the nomenclatural connection with the genus Cordyceps Fr. Since its valid publication under the basidiomycetous genus Clavaria Vaill. ex L. (Clavaria militaris L. Sp. Pl. 2:1182, 1753), the genus Cordyceps has undergone nomenclatural changes in the post-Linnaean era, but has stood firmly for approximately 200 years. Synonyms of Cordyceps were collected from different literature sources and analyzed based on the species they represent. True synonyms of Cordyceps Fr. were defined as genera that represented species of Cordyceps Fr. emend. G. H. Sung, J. M. Sung, Hywel-Jones & Spatafora. The most common synonyms of Cordyceps observed were Clavaria and Sphaeria Hall, reported in the 18th and in the first half of the 19th century, respectively. Cordyceps, the oldest genus in the Cordyceps s. s. clade of Cordycipitaceae, is the most preferred name under the "One Fungus = One Name" principle on priority bases. PMID:25071376

  8. Yucca: A medicinally significant genus with manifold therapeutic attributes

    OpenAIRE

    Patel, Seema

    2012-01-01

    The genus Yucca comprising of several species is dominant across the chaparrals, canyons and deserts of American South West and Mexico. This genus has long been a source of sustenance and drugs for the Native Americans. In the wake of revived interest in drug discovery from plant sources, this genus has been investigated and startling nutritive and therapeutic capacities have come forth. Apart from the functional food potential, antioxidant, antiinflammation, antiarthritic, anticancer, antidi...

  9. Genus-two characters of the Ising model

    International Nuclear Information System (INIS)

    Choi, J.H.; Koh, I.G.

    1989-01-01

    As a first step in studying conformal theories on a higher-genus Riemann surface, we construct genus-two characters of the Ising model from their behavior in zero- and nonzero-homology pinching limits, the Goddard-Kent-Oliveco set-space construction, and the branching coefficients in the level-two A 1 /sup (1)/ Kac-Moody characters on the higher-genus Riemann surface

  10. A MONOGRAPH OF THE GENUS DIPLODISCUS* Turcz. (TILIACEAE

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    A. J. G. H. KOSTERMANS

    2014-01-01

    Full Text Available 1. Seven species of the genus Diplodiscus are described, of which three(D. microlepis, D. parviflorus and D. decumbens are new to science, and one (D. hookerianus was formerly described as Pentace (for the description of D. decumbens cf. p. 264.2. The area of distribution of the genus covers the Malay Peninsula,Borneo and the Philippines.3. The affinities of the genus are discussed.4. A key to the species is presented.

  11. Genus Tinospora: Ethnopharmacology, Phytochemistry, and Pharmacology

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    Sensen Chi

    2016-01-01

    Full Text Available The genus Tinospora includes 34 species, in which several herbs were used as traditional medicines by indigenous groups throughout the tropical and subtropical parts of Asia, Africa, and Australia. The extensive literature survey revealed Tinospora species to be a group of important medicinal plants used for the ethnomedical treatment of colds, headaches, pharyngitis, fever, diarrhea, oral ulcer, diabetes, digestive disorder, and rheumatoid arthritis. Indian ethnopharmacological data points to the therapeutic potential of the T. cordifolia for the treatment of diabetic conditions. While Tinospora species are confusing in individual ingredients and their mechanisms of action, the ethnopharmacological history of those plants indicated that they exhibit antidiabetic, antioxidation, antitumor, anti-inflammation, antimicrobial, antiosteoporosis, and immunostimulation activities. While the clinical applications in modern medicine are lacking convincing evidence and support, this review is aimed at summarizing the current knowledge of the traditional uses, phytochemistry, biological activities, and toxicities of the genus Tinospora to reveal its therapeutic potentials and gaps, offering opportunities for future researches.

  12. THE FERN-GENUS PLEOCNEMIA PRESL

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    R. E. HOLTTUM

    2015-11-01

    Full Text Available 1. The genus Pleocnemia Presl is redefined and differentiated from Tectaria- Cav. and Arcypteris Underw., the latter genus being very closely related to Pleocne- mia. 2. The configuration of the perispore proved to be of importance for the characterisation of the .species. In this regard three types are distinguished, perispore 1 forming crisped anastomosing wings, perispore consisting of many slender spines, and, an intermediate type, perispore forming many small separate wings. 3. Tentatively 15 species are recognized. Of these, Pleocnemia winitii Holttum, P. acuminata Holttum, P. pleiotricha Holttum, P. presliana Holttum, P. dimidiolobata Holttum, P. tripinnata Holttum, and P. seranensis Holttum are described as new, aa well as one variety, P. conjugata var. elatior Holttum. 4. The following new combinations are made: P. hemiteliiformis (Racib. Holt- tum (basinym: Pleocnemia leuzeana var. hemiteliaeformis Racib., P. olivacea (Copel. Holttum (basinym: Tectaria olivacea Copel., P. kingii (Copel. Holttum (basinym: Tectaria kingii Copel., and P. chrysotricha (Bak. Holttum (basinym: Nephrodium chrysotrichum Bak.. 5. Reductions to synonymy are: Pleocnemia javanica Presl to P. conjugata (Bl. Presl, and Dictyopteris compitalis v. A. v. R. to P. hemiteliiformis (Racib. Holtt.

  13. Aggressive behavior in the genus Gallus sp

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    SA Queiroz

    2006-03-01

    Full Text Available The intensification of the production system in the poultry industry and the vertical integration of the poultry agribusiness have brought profound changes in the physical and social environment of domestic fowls in comparison to their ancestors and have modified the expression of aggression and submission. The present review has covered the studies focusing on the different aspects linked to aggressiveness in the genus Gallus. The evaluated studies have shown that aggressiveness and subordination are complex behavioral expressions that involve genetic differences between breeds, strains and individuals, and differences in the cerebral development during growth, in the hormonal metabolism, in the rearing conditions of individuals, including feed restriction, density, housing type (litter or cage, influence of the opposite sex during the growth period, existence of hostile stimuli (pain and frustration, ability to recognize individuals and social learning. The utilization of fighting birds as experimental material in the study of mechanisms that have influence on the manifestation of aggressiveness in the genus Gallus might comparatively help to elucidate important biological aspects of such behavior.

  14. Elliptic genus of E-strings

    Science.gov (United States)

    Kim, Joonho; Kim, Seok; Lee, Kimyeong; Park, Jaemo; Vafa, Cumrun

    2017-09-01

    We study a family of 2d N=(0, 4) gauge theories which describes at low energy the dynamics of E-strings, the M2-branes suspended between a pair of M5 and M9 branes. The gauge theory is engineered using a duality with type IIA theory, leading to the D2-branes suspended between an NS5-brane and 8 D8-branes on an O8-plane. We compute the elliptic genus of this family of theories, and find agreement with the known results for single and two E-strings. The partition function can in principle be computed for arbitrary number of E-strings, and we compute them explicitly for low numbers. We test our predictions against the partially known results from topological strings, as well as from the instanton calculus of 5d Sp(1) gauge theory. Given the relation to topological strings, our computation provides the all genus partition function of the refined topological strings on the canonical bundle over 1/2K3.

  15. Karyotypes of Akodon orophilus Osgood 1913 and Thomasomys sp. (Rodentia: Sigmodontinae from Huánuco, Peru

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    Víctor Pacheco

    2012-10-01

    Full Text Available Conventional chromosomal preparations were made of three native mice from Huánuco, Peru: a male and a female of Thomasomys sp., and a male of Akodon orophilus. Thomasomys sp. had a karyotype of 2n = 42, XY (n = 21, meanwhile A. orophilus presented 2n = 22, XY (n = 11. Comparisons between chromosomal pairs from the existent literature indicate that both are new karyotypes. Thomasomys sp. has a distinct sexual Y chromosome, the only metacentric (m reported for the genus. The chromosomes X and Y of A. orophilus are acrocentrics (a; and the length of chromosome Y (2/3 of the length of X distinguishes A. orophilus from other congeneric. Because the structural differences between the sexual chromosomes usually generates mechanism of reproductive isolation at intraspecific level and are bigger still in interspecific crosses, we concluded that the karyotypes reported here support the validity of the species A. orophilus and suggest that Thomasomys sp. represents a new species to science.

  16. The arithmetic of Prym varieties in genus 3

    OpenAIRE

    Bruin, Nils

    2004-01-01

    Given a curve of genus 3 with an unramified double cover, we give an explicit description of the associated Prym-variety. We also describe how an unramified double cover of a non-hyperelliptic genus 3 curve can be mapped into the Jacobian of a curve of genus 2 over its field of definition and how this can be used to do Chabauty- and Brauer-Manin type calculations for curves of genus 5 with an unramified involution. As an application, we determine the rational points on a smooth plane quartic ...

  17. New polymorphic microsatellite loci for rodents of the genus Mastomys using PCR multiplexing, and cross-species amplification in Myomys and Praomys

    Czech Academy of Sciences Publication Activity Database

    Loiseau, A.; Konečný, Adam; Galan, M.; Bryja, Josef; Cosson, J.-F.; Brouat, C.

    2007-01-01

    Roč. 7, č. 4 (2007), s. 684-687 ISSN 1471-8278 R&D Projects: GA AV ČR IAA6093404 Institutional research plan: CEZ:AV0Z60930519 Keywords : microsatellite * Rodentia Subject RIV: EB - Genetics ; Molecular Biology Impact factor: 1.257, year: 2007

  18. Transfer of Methanolobus siciliae to the genus Methanosarcina, naming it Methanosarcina siciliae, and emendation of the genus Methanosarcina

    Science.gov (United States)

    Ni, S.; Woese, C. R.; Aldrich, H. C.; Boone, D. R.

    1994-01-01

    A sequence analysis of the 16S rRNA of Methanolobus siciliae T4/M(T) (T = type strain) showed that this strain is closely related to members of the genus Methanosarcina, especially Methanosarcina acetivorans C2A(T). Methanolobus siciliae T4/M(T) and HI350 were morphologically more similar to members of the genus Methanosarcina than to members of the genus Methanolobus in that they both formed massive cell aggregates with pseudosarcinae. Thus, we propose that Methanolobus siciliae should be transferred to the genus Methanosarcina as Methanosarcina siciliae.

  19. Comparison between Oligoryzomys nigripes and O. flavescens by RAPD and genetic diversity in O. nigripes (Rodentia, Cricetidae

    Directory of Open Access Journals (Sweden)

    AJ Mossi

    Full Text Available The genus of Oligoryzomys includes species of small size, morphologically similar, which may impede taxonomic identification, mainly between O. flavescens (Waterhouse, 1837 and O. nigripes (Olfers, 1818. The main objective of this work was to investigate whether the RAPD markers are capable of genetically differentiating the specimens O. nigripes and O. flavescens, coming from Rio Grande do Sul (RS and Santa Catarina (SC states, and also to estimate the genetic variability among populations of O. nigripes, with the Uruguay River as a geographical barrier. For this purpose, samples were collected in fragments of forests situated in the North of RS, at FLONA (Floresta Nacional de Passo Fundo and in fragments from SC, close to the Uruguay River. The karyotyping of two samples for each species was carried out and compared using the RAPD technique together with non- karyotyped individuals. Samples of O. nigripes presented 2n = 62; NA = 82, with submetacentric arms on the largest chromosomes, while samples of O. flavescens showed 2n = 64; NA = 66, with the largest chromosomes presenting acrocentric morphology, making such a result the main difference between the species. The analysis was able to detect two distinct groups, being the first one with karyotyped O. flavescens and the second with karyotyped O. nigripes. Identification afforded 211 loci, among them 181 (85.78% polymorphic. The Jaccard similarity coefficient was in the range of 0.45 to 0.87. The UPGMA and Main Coordinate Analysis techniques demonstrated the existence of heterogeneous genetics among populations, but did not separate them completely in terms of geographical standards, and they are not influenced by the Uruguay River, which did not act as an efficient barrier.

  20. Thrichomys laurentius (Rodentia; Echimyidae as a putative reservoir of Leishmania infantum and L. braziliensis: patterns of experimental infection.

    Directory of Open Access Journals (Sweden)

    André Luiz Rodrigues Roque

    Full Text Available The importance of the genus Thrichomys in the retention of infection and transmission of Leishmania species is supported by previous studies that describe an ancient interaction between caviomorphs and trypanosomatids and report the natural infection of Thrichomys spp. Moreover, these rodents are widely dispersed in Brazil and recognized as important hosts of other tripanosomatids. Our main purpose was to evaluate the putative role of Thrichomys laurentius in the retention of infection and amplification of the transmission cycle of Leishmania infantum and L. braziliensis. Male and female T. laurentius (n = 24 born in captivity were evaluated for the retention of infection with these Leishmania species and followed up by parasitological, serological, hematological, biochemical, histological, and molecular assays for 3, 6, 9, or 12 months post infection (mpi. T. laurentius showed its competence as maintenance host for the two inoculated Leishmania species. Four aspects should be highlighted: (i re-isolation of parasites 12 mpi; (ii the low parasitic burden displayed by T. laurentius tissues; (iii the early onset and maintenance of humoral response, and (iv the similar pattern of infection by the two Leishmania species. Both Leishmania species demonstrated the ability to invade and maintain itself in viscera and skin of T. laurentius, and no rodent displayed any lesion, histological changes, or clinical evidence of infection. We also wish to point out the irrelevance of the adjective dermotropic or viscerotropic to qualify L. braziliensis and L. infantum, respectively, when these species are hosted by nonhuman hosts. Our data suggest that T. laurentius may act at least as a maintenance host of both tested Leishmania species since it maintained long-lasting infections. Moreover, it cannot be discarded that Leishmania spp. infection in free-ranging T. laurentius could result in higher parasite burden due the more stressing conditions in the wild

  1. Hábitos alimenticios de la ardilla Sciurus variegatoides (Rodentia: Sciuridae en la Península de Nicoya, Costa Rica

    Directory of Open Access Journals (Sweden)

    Javier Monge

    2006-06-01

    Full Text Available Se determinaron los componentes de la dieta de la ardilla Sciurus variegatoides atrirufus en un área agrícola de la Península de Nicoya, Costa Rica (9º47’ N, 84º56’ W, correspondiente a las zonas de vida Bosque Húmedo Premontano Transición a Basal y Bosque Seco Tropical. Al analizar el contenido estomacal de 120 ardillas, entre febrero de 1987 y enero de 1988, se determinó que los alimentos más importantes fueron el coco (Cocos nucifera, el almendro (Terminalia catappa y el malinche (Delonix regia. Hubo diferencias en el tipo de alimento según la edad. Los adultos consumieron más el coco y los jóvenes el almendro, lo cual se explica por las características del fruto, así como por la arquitectura y acceso al árbol; el almendro aporta mejores condiciones de protección y un recurso alimenticio más accesible, por lo que fue mejor aprovechado por los individuos jóvenes.Feeding habits of the squirrel Sciurus variegatoides (Rodentia: Sciuridae in the Nicoya Peninsula, Costa Rica. Food items consumed by the squirrel Sciurus variegatoides atrirufus were determined in an agricultural setting in the Nicoya Península (9º47’ N, 84º56’ W, Costa Rica, where two life zones (Premontane Moist Forest Basal Belt Transition, and Tropical Dry Forest predominate. By analyzing the gut contents of 120 squirrels, from February 1987 through January 1988, it was determined that coconut (Cocos nucifera, indian almond (Terminalia catappa and flamboyant (Delonix regia were the most common dietary items. There were differences in food consumption according to age: adults preferred coconut, whereas young individuals preferred almond. This finding can be explained in terms of fruit characteristics, as well as tree architecture and accessibility for squirrels; almendro trees provide higher protection and a more accessible food resource, so that it was better used by young individuals. Rev. Biol. Trop. 54(2: 681-686. Epub 2006 Jun 01.

  2. The genus Schoenoxiphium (Cyperaceae. A preliminary account

    Directory of Open Access Journals (Sweden)

    I. Kukkonen

    1983-11-01

    Full Text Available The genus Schoenoxiphium of the tribe Cariceae of Cyperaceae is conservatively accepted as being restricted to the African continent and Madagascar. The special features of the inflorescence structure are described. The following species are provisionally recognized: S. basutorum Turrill, S. distinctum Kukkonen, S. ecklonii Nees, S.  filiforme Kükenthal, S. gracile Chermezon, S. lanceum (Thunberg Kukenthal, S. lehmannii (Nees Steudel, S.  madagascariense Chermezon, S. perdensum Kukkonen, S. rufum Nees, S. schweickerdtii Merxmiiller & Podlech, and  S. sparteum (Wahlenberg Kukenthal. A key to the species is provided and their distribution is roughly outlined. The morphological variation within the species suggests separation of taxa below specific level, or perhaps even at species level, but this will require more detailed information about the ecology, distribution and the cytology.

  3. Small RNAs in the genus Clostridium.

    Science.gov (United States)

    Chen, Yili; Indurthi, Dinesh C; Jones, Shawn W; Papoutsakis, Eleftherios T

    2011-01-25

    The genus Clostridium includes major human pathogens and species important to cellulose degradation, the carbon cycle, and biotechnology. Small RNAs (sRNAs) are emerging as crucial regulatory molecules in all organisms, but they have not been investigated in clostridia. Research on sRNAs in clostridia is hindered by the absence of a systematic method to identify sRNA candidates, thus delegating clostridial sRNA research to a hit-and-miss process. Thus, we wanted to develop a method to identify potential sRNAs in the Clostridium genus to open up the field of sRNA research in clostridia. Using comparative genomics analyses combined with predictions of rho-independent terminators and promoters, we predicted sRNAs in 21 clostridial genomes: Clostridium acetobutylicum, C. beijerinckii, C. botulinum (eight strains), C. cellulolyticum, C. difficile, C. kluyveri (two strains), C. novyi, C. perfringens (three strains), C. phytofermentans, C. tetani, and C. thermocellum. Although more than one-third of predicted sRNAs have Shine-Dalgarno (SD) sequences, only one-sixth have a start codon downstream of SD sequences; thus, most of the predicted sRNAs are noncoding RNAs. Quantitative reverse transcription-PCR (Q-RT-PCR) and Northern analysis were employed to test the presence of a randomly chosen set of sRNAs in C. acetobutylicum and several C. botulinum strains, leading to the confirmation of a large fraction of the tested sRNAs. We identified a conserved, novel sRNA which, together with the downstream gene coding for an ATP-binding cassette (ABC) transporter gene, responds to the antibiotic clindamycin. The number of predicted sRNAs correlated with the physiological function of the species (high for pathogens, low for cellulolytic, and intermediate for solventogenic), but not with 16S rRNA-based phylogeny. Copyright © 2011 Chen et al.

  4. Karyotype evolution and species differentiation in the genus Rattus ...

    African Journals Online (AJOL)

    Rattus is the most studied genus all over the world but species of the genus are not thoroughly reported from Manipur. The present paper deals with the morphometric, cytotaxonomic and phylogenetic studies of Manipur, India. The different species of Rattus namely Rattus rattus, Rattus brunneusculus, Rattus tanezumi and ...

  5. Revision of the genus Paratropus Gerstaecker (Coleoptera: Histeridae)

    NARCIS (Netherlands)

    Kanaar, P.

    1997-01-01

    The myrmecophilous and termitophilous genus Paratropus Gerstaecker is revised and figured. A key to the species is given. The number of species in this genus has been brought up to 80, of which 31 species are described as new: P. arriagadai (Tanzania), P. bakxi (Zaire), P. baloghi (Congo, Zaire,

  6. The neotropical genus Opeatocerata Melander (Díptera, Empididae

    Directory of Open Access Journals (Sweden)

    Kenneth G. V. Smith

    1989-01-01

    Full Text Available The Neotropical empidid genus Opeatocerata Melander, hitherto known from only a sigle female from Mexico, is redefined in the light of new material, including males. Three new species are described and illustrated, a key provided and the presence of the genus now additionally established in Costa Rica, Panama, Bolivia, Ecuador, Trinidad and Brazil.

  7. Torsionfree sheaves over a nodal curve of arithmetic genus one

    Indian Academy of Sciences (India)

    We classify all isomorphism classes of stable torsionfree sheaves on an irreducible nodal curve of arithmetic genus one defined over C C . Let be a nodal curve of arithmetic genus one defined over R R , with exactly one node, such that does not have any real points apart from the node. We classify all isomorphism ...

  8. A partial revision of the genus Metabelba grandjean (Oribatei, Acari)

    NARCIS (Netherlands)

    Hammen, van der L.

    1953-01-01

    INTRODUCTION The genus Metabelba was created by Grandjean in 1936 for Belbidae of which the solenidions of tibiae II and III are coupled with protective hairs, but of which the solenidion of tibia IV is free, long, and tactile. The genus belongs to the group of rather small species that are never

  9. Note on the genus Barteria Hook. f. (Flacourtiaceae or Passifloraceae)

    NARCIS (Netherlands)

    Sleumer, H.

    1974-01-01

    The discrimination of species in the genus Barteria has become more and more difficult with the increasing number of collections in recent years. To explain his treatment of the genus in the forthcoming 2nd part of the Flacourtiaceae in the ‘Flore d’Afrique Central (Zaire-Rwanda-Burundi)’, the

  10. Revision of the genus Xerula Maire (Basidiomycetes, Agaricales in Poland

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    Anna Ronikier

    2011-01-01

    Full Text Available Data concerning morphology, ecology and distribution of Polish representatives of the genus Xerula Maire are discussed in the paper. All available specimens of X. pudens and X. melanotricha from Polish herbaria were reexamined to verify their identity and geographical distribution. Several new localities of X. melanotricha in the country are provided. A key to European taxa of the genus is proposed.

  11. A path integral derivation of χy-genus

    International Nuclear Information System (INIS)

    Meng, Guowu

    2003-01-01

    The formula for the Hirzebruch χ y -genus of complex manifolds is a consequence of the Hirzebruch-Riemann-Roch formula. The classical index formulae for Todd genus, Euler number and signature correspond to the case when the complex variable y=0, -1 and 1 respectively. Here we give a direct derivation of this nice formula based on supersymmetric quantum mechanics

  12. Revision of the genus Microterys Thomson (Hymenoptera: Encyrtidae) of China

    NARCIS (Netherlands)

    Xu, Z.

    2002-01-01

    The species of Microterys Thomson from China are revised. Forty-three species are described and illustrated, of which 17 are new to science. Seventeen new species are described and illustrated, 26 species of the genus are revised and redescribed. The hosts of 33 species of the genus Microterys are

  13. Calongea, a new genus of truffles in the Pezizaceae (Pezizales)

    Science.gov (United States)

    Rosanne A. Healy; Gregory Bonito; James M. Trappe

    2009-01-01

    Phylogenetic analysis of the ITS and LSU rDNA of Pachyphloeus species from Europe and North America revealed a new truffle genus. These molecular analyses plus sequences downloaded from a BLAST search in GenBank indicated that Pachyphloeus prieguensis is within the Pezizaceae but well outside of the genus Pachyphloeus...

  14. The Polyakov relation for the sphere and higher genus surfaces

    International Nuclear Information System (INIS)

    Menotti, Pietro

    2016-01-01

    The Polyakov relation, which in the sphere topology gives the changes of the Liouville action under the variation of the position of the sources, is also related in the case of higher genus to the dependence of the action on the moduli of the surface. We write and prove such a relation for genus 1 and for all hyperelliptic surfaces. (paper)

  15. Genetic diversity within the genus Cynotilapia and its phylogenetic ...

    African Journals Online (AJOL)

    Cynotilapia's unicuspid teeth, a unique character used to delineate it from all other mbuna genera, leaves evolutionary biologists wondering which is the closest relative to this genus among mbuna cichlids. This genus has only two described species out of the 10-13 species/taxa, whereby the undescribed taxa are either ...

  16. Biological activities of species in the genus Tulbaghia : A review ...

    African Journals Online (AJOL)

    Species of the genus Tulbaghia has been widely used in traditional medicine to treat various ailments such rheumatism, fits, fever, earache, tuberculosis etc. It is believed that the species possess several therapeutic properties. This paper evaluates some of the biological activities of the genus Tulbaghia. It is evident from ...

  17. On the entropy of random surfaces with arbitrary genus

    International Nuclear Information System (INIS)

    Kostov, I.K.; Krzywicki, A.

    1987-01-01

    We calculate the susceptibility critical exponent γ for Polyakov random surfaces with arbitrary genus, using the Liouville theory to one-loop order. Some rigorous results obtained for special dimensionalities in a discrete version of the model are also noted. In all cases γ grows linearly with the genus of the surface. (orig.)

  18. Phylogeny of the genus Morus (Urticales: Moraceae) inferred from ...

    African Journals Online (AJOL)

    Both nuclear ribosomal ITS and chloroplast trnL-F sequences were acquired from 13 mulberry genotypes belonging to nine species and three varieties, and one paper mulberry. The later belongs to genus B. papyrifera, designed as outgroup, and were analyzed. Within the genus Morus, the sequence diversity of ITS was ...

  19. Molecular phylogeny and taxonomy of the genus Veloporphyrellus

    Science.gov (United States)

    Yan-Chun Li; Beatriz Ortiz-Santana; Nian-Kai Zeng; Bang Feng; Zhu L. Yang

    2014-01-01

    Veloporphyrellus is a genus known from North and Central America, southeastern Asia, and Africa. Because species of this genus are phenotypically similar to some taxa in several genera, such as Boletellus, Leccinum, Strobilomyces, Suillus and Tylopilus s.l. belonging to Boletales, its phylogenetic disposition has...

  20. Natural genetic variation in Calligonum Tunisian genus analyzed by ...

    African Journals Online (AJOL)

    The Calligonum genus is one of the most economically important resources of the Tunisian desert, playing an important role in the lives of desert local population. A great range of genetic diversity could be seen in diverse populations of this genus which are spread all over Tunisian areas. DNA-based molecular markers are ...

  1. Non-abelian bosonization in higher genus Riemann surfaces

    International Nuclear Information System (INIS)

    Koh, I.G.; Yu, M.

    1987-08-01

    We propose a generalization of the character formulas of the SU(2) Kac-Moody algebra to higher genus Riemann surfaces. With this construction, we show that the modular invariant partition function of the SO(4) κ = 1 Wess-Zumino model is equivalent, in arbitrary genus Riemann surfaces, to that of free fermion theory. (orig.)

  2. Australasian sequestrate fungi 17: The genus Hydnoplicata (Ascomycota, Pezizacae) resurrected

    Science.gov (United States)

    James M. Trappe; Andrew W. Claridge

    2006-01-01

    The genus Hydnoplicata and its type species, H. whitei, were described by Gilkey in 1954. Having discovered that it has amyloid asci and other characters that relate it to the genus Peziza, Trappe later proposed the new combination, Peziza whiten, even though the species is consistently...

  3. Revision of the genus Trypeticus Marseul (Coleoptera: Histeridae)

    NARCIS (Netherlands)

    Kanaar, P.

    2003-01-01

    The genus Trypeticus Marseul, 1864 is revised and figured. A key to the species is given. Redescriptions of the hitherto described species are presented. The number of species in this genus has been brought up to 100, of which 72 species are described as new: T. adebratti (Sabah, Brunei), T.

  4. Non-abelian bosonization in higher genus Riemann surfaces

    International Nuclear Information System (INIS)

    Koh, I.G.; Yu, M.

    1988-01-01

    We propose a generalization of the character formulas of the SU(2) Kac-Moody algebra to higher genus Riemann surfaces. With this construction, we show that the modular invariant partition funciton of the SO(4) k = 1 Wess-Zumino model is equivalent, in arbitrary genus Riemann surfaces, to that of free fermion theory. (orig.)

  5. A taxonomic revision of the Genus Origanum (Labiatae)

    NARCIS (Netherlands)

    Ietswaart, J.H.

    1980-01-01

    The present study deals with the systematics and taxonomy of the genus Origanum (Labiatae, Saturejeae). As this difficult genus was never before monographed, a revisional study was much needed. The data presented are mainly based on the study of herbarium specimens and in some cases of living ones.

  6. Florae Malesianae Precursores XXVIII. The genus Vaccinium in Malaysia

    NARCIS (Netherlands)

    Sleumer, H.

    1961-01-01

    Within the genus Vaccinium L. this revision of its Malaysian species — which comprises more than half of the total number of species of the genus — is the last in a series of modern treatments made for North America by W. H. Camp, for the Pacific area by C. Skottsberg, and for tropical America and

  7. The genus Gloriosa (Colchicaceae) : ethnobotany, phylogeny and taxonomy

    NARCIS (Netherlands)

    Maroyi, A.

    2012-01-01

    This thesis focuses on the ethnobotany, phylogeny and taxonomy of the genus Gloriosa L. over its distributional range. Some Gloriosa species are known to have economic and commercial value, but the genus is also well known for its complex alpha taxonomy. An appropriate taxonomy for this group is of

  8. The differentiation within the genus Chamaeleo Laurenti, 1768

    NARCIS (Netherlands)

    Hillenius, D.

    1959-01-01

    The main purpose of this study is to search for an explanation of the curious differentiation within the genus Chamaeleo. Since the species of this genus are rather doubtful units, I have studied the geograpical distribution of characters, not of the species, a method first used in botany (BAUR,

  9. Notes on the genus Pirdana Distant, 1886 (Lepidoptera: Hesperiidae)

    NARCIS (Netherlands)

    Jong, de R.; Treadaway, C.G.

    1993-01-01

    In the Oriental genus Pirdana Distant, 1886, the new species P. fusca is described from Samar (E Philippines). The phylogeny of the genus is discussed and as a consequence the endemic Sulawesi taxon P. hyela ismene (Felder & Felder, [1867]) is given back its species rank, bringing the total number

  10. Australasian sequestrate fungi 17: the genus Hydnoplicata (Ascomycota, Pezizaceae) resurrected.

    Science.gov (United States)

    James M. Trappe; Andrew W. Claridge

    2006-01-01

    The genus Hydnoplicata and its type species, H. whitei, were described by Gilkey in 1954. Having discovered that it has amyloid asci and other characters that relate it to the genus Peziza, Trappe later proposed the new combination, Peziza whitei, even though the species is consistently...

  11. On RNA-RNA interaction structures of fixed topological genus.

    Science.gov (United States)

    Fu, Benjamin M M; Han, Hillary S W; Reidys, Christian M

    2015-04-01

    Interacting RNA complexes are studied via bicellular maps using a filtration via their topological genus. Our main result is a new bijection for RNA-RNA interaction structures and a linear time uniform sampling algorithm for RNA complexes of fixed topological genus. The bijection allows to either reduce the topological genus of a bicellular map directly, or to lose connectivity by decomposing the complex into a pair of single stranded RNA structures. Our main result is proved bijectively. It provides an explicit algorithm of how to rewire the corresponding complexes and an unambiguous decomposition grammar. Using the concept of genus induction, we construct bicellular maps of fixed topological genus g uniformly in linear time. We present various statistics on these topological RNA complexes and compare our findings with biological complexes. Furthermore we show how to construct loop-energy based complexes using our decomposition grammar. Copyright © 2015 Elsevier Inc. All rights reserved.

  12. Log-concavity of the genus polynomials of Ringel Ladders

    Directory of Open Access Journals (Sweden)

    Jonathan L Gross

    2015-10-01

    Full Text Available A Ringel ladder can be formed by a self-bar-amalgamation operation on a symmetric ladder, that is, by joining the root vertices on its end-rungs. The present authors have previously derived criteria under which linear chains of copies of one or more graphs have log-concave genus polyno- mials. Herein we establish Ringel ladders as the first significant non-linear infinite family of graphs known to have log-concave genus polynomials. We construct an algebraic representation of self-bar-amalgamation as a matrix operation, to be applied to a vector representation of the partitioned genus distribution of a symmetric ladder. Analysis of the resulting genus polynomial involves the use of Chebyshev polynomials. This paper continues our quest to affirm the quarter-century-old conjecture that all graphs have log-concave genus polynomials.

  13. Genomes-based phylogeny of the genus Xanthomonas

    Directory of Open Access Journals (Sweden)

    Rodriguez-R Luis M

    2012-03-01

    Full Text Available Abstract Background The genus Xanthomonas comprises several plant pathogenic bacteria affecting a wide range of hosts. Despite the economic, industrial and biological importance of Xanthomonas, the classification and phylogenetic relationships within the genus are still under active debate. Some of the relationships between pathovars and species have not been thoroughly clarified, with old pathovars becoming new species. A change in the genus name has been recently suggested for Xanthomonas albilineans, an early branching species currently located in this genus, but a thorough phylogenomic reconstruction would aid in solving these and other discrepancies in this genus. Results Here we report the results of the genome-wide analysis of DNA sequences from 989 orthologous groups from 17 Xanthomonas spp. genomes available to date, representing all major lineages within the genus. The phylogenetic and computational analyses used in this study have been automated in a Perl package designated Unus, which provides a framework for phylogenomic analyses which can be applied to other datasets at the genomic level. Unus can also be easily incorporated into other phylogenomic pipelines. Conclusions Our phylogeny agrees with previous phylogenetic topologies on the genus, but revealed that the genomes of Xanthomonas citri and Xanthomonas fuscans belong to the same species, and that of Xanthomonas albilineans is basal to the joint clade of Xanthomonas and Xylella fastidiosa. Genome reduction was identified in the species Xanthomonas vasicola in addition to the previously identified reduction in Xanthomonas albilineans. Lateral gene transfer was also observed in two gene clusters.

  14. Analysis of synonymous codon usage patterns in the genus Rhizobium.

    Science.gov (United States)

    Wang, Xinxin; Wu, Liang; Zhou, Ping; Zhu, Shengfeng; An, Wei; Chen, Yu; Zhao, Lin

    2013-11-01

    The codon usage patterns of rhizobia have received increasing attention. However, little information is available regarding the conserved features of the codon usage patterns in a typical rhizobial genus. The codon usage patterns of six completely sequenced strains belonging to the genus Rhizobium were analysed as model rhizobia in the present study. The relative neutrality plot showed that selection pressure played a role in codon usage in the genus Rhizobium. Spearman's rank correlation analysis combined with correspondence analysis (COA) showed that the codon adaptation index and the effective number of codons (ENC) had strong correlation with the first axis of the COA, which indicated the important role of gene expression level and the ENC in the codon usage patterns in this genus. The relative synonymous codon usage of Cys codons had the strongest correlation with the second axis of the COA. Accordingly, the usage of Cys codons was another important factor that shaped the codon usage patterns in Rhizobium genomes and was a conserved feature of the genus. Moreover, the comparison of codon usage between highly and lowly expressed genes showed that 20 unique preferred codons were shared among Rhizobium genomes, revealing another conserved feature of the genus. This is the first report of the codon usage patterns in the genus Rhizobium.

  15. Mitochondrial DNA evolution in the genus Equus.

    Science.gov (United States)

    George, M; Ryder, O A

    1986-11-01

    Employing mitochondrial DNA (mtDNA) restriction-endonuclease maps as the basis of comparison, we have investigated the evolutionary affinities of the seven species generally recognized as the genus Equus. Individual species' cleavage maps contained an average of 60 cleavage sites for 16 enzymes, of which 29 were invariant for all species. Based on an average divergence rate of 2%/Myr, the variation between species supports a divergence of extant lineages from a common ancestor approximately 3.9 Myr before the present. Comparisons of cleavage maps between Equus przewalskii (Mongolian wild horse) and E. caballus (domestic horse) yielded estimates of nucleotide sequence divergence ranging from 0.27% to 0.41%. This range was due to intraspecific variation, which was noted only for E. caballus. For pairwise comparisons within this family, estimates of sequence divergence ranged from 0% (E. hemionus onager vs. E. h. kulan) to 7.8% (E. przewalskii vs. E. h. onager). Trees constructed according to the parsimony principle, on the basis of 31 phylogenetically informative restriction sites, indicate that the three extant zebra species represent a monophyletic group with E. grevyi and E. burchelli antiquorum diverging most recently. The phylogenetic relationships of E. africanus and E. hemionus remain enigmatic on the basis of the mtDNA analysis, although a recent divergence is unsupported.

  16. THE GENUS VIBURNUM (CAPRIFOLIACEAE IN MALAYSIA

    Directory of Open Access Journals (Sweden)

    J. H. KERN

    2015-11-01

    Full Text Available 1. In the following pages an account of the genus Viburnum in Malaysia is presented. 2. The distribution of its species is briefly discussed and a map relating to it added. 3. The main part of the present paper consists of keys to the sections and species, followed by a systematic treatment of the 16 species admitted for the region. 4. Three new subsections are proposed, viz. Viburnum subsect. Punctata Kern, subsect. Sambucina Kern, and subsect. Lutescentia Kern. Viburnum subseries Coriacea Maxim, is reduced to the rank of a subsection. 5. Three species and two varieties are described as new, viz. Viburnum ampli- ficatum Kern, V. clemensae Kern, V. hispidulum Kern, V. coriaceum, var. longiflorutn Kern, and V. sambucinum var. subglabrum Kern. 6. The following species are reduced to the rank of varieties: Viburnum flori- bundum Merr. has become V. luzonicum var. floribundum (Merr. Kern, and V. sinu- atum Merr. has become V. luzonicum var. sinuatum (Merr. Kern. 7. The following reductions'to synonymy are made: Viburnum longistamineum Ridl. to V. sambucinum- var. subglabrum Kern; V. sumatranum Miq., V.villosum Ridl., and V. inopinatum Craib all to V. sambucinum var. tovientosum Hallier f.; V. forbesii Fawc. partly to V. sambucimim Bl., partly to V. coriaceum BL; and V. zippelii Miq. to V. japonicum (Thunb. Spr. 8. Emended descriptions of Viburnum beccarii Gamble and of V. junghuhnii Miq. are given.

  17. Genetics and Genomics of the Genus Amycolatopsis.

    Science.gov (United States)

    Kumari, Rashmi; Singh, Priya; Lal, Rup

    2016-09-01

    Actinobacteria are gram-positive filamentous bacteria which contains some of the most deadly human pathogens (Mycobacterium tuberculosis, M. leprae, Corynebacterium diphtheriae, Nocardia farcinica), plant pathogens (Streptomyces scabies, Leifsonia xyli) along with organisms that produces antibiotic (Streptomycetes, Amycolatopsis, Salinospora). Interestingly, these bacteria are equipped with an extraordinary capability of producing antibiotics and other metabolites which have medicinal properties. With the advent of inexpensive genome sequencing techniques and their clinical importance, many genomes of Actinobacteria have been successfully sequenced. These days, with the constant increasing number of drug-resistant bacteria, the urgent need for discovering new antibiotics has emerged as a major scientific challenge. And, unfortunately the traditional method of screening bacterial strains for the production of antibiotics has decreased leading to a paradigm shift in the planning and execution of discovery of novel biosynthetic gene clusters via genome mining process. The entire focus has shifted to the evaluation of genetic capacity of organisms for metabolite production and activation of cryptic gene clusters. This has been made possible only due to the availability of genome sequencing and has been augmented by genomic studies and new biotechnological approaches. Through this article, we present the analysis of the genomes of species belonging to the genus Amycolatopsis, sequenced till date with a focus on completely sequenced genomes and their application for further studies.

  18. American Tertiary mollusks of the genus Clementia

    Science.gov (United States)

    Woodring, W.P.

    1927-01-01

    Aside from its value as an aid in determining the age of Tertiary beds, the chief interest of the genus Clementia lies in the anomalous features of its present and former distribution. An attempt is made in this paper to trace its geologic history, to point out its paleobiologic significance, and to describe all the known American Tertiary species. The fossils from Colombia used in preparing this report were collected during explorations made under the direction of Dr. 0. B. Hopkins, chief geologist of the Imperial Oil Co. (Ltd.), who kindly donated them to the United States National Museum. Dr. T. Wayland Vaughan, of the Scripps Institution of Oceanography, furnished information relating to specimens collected by him in Mexico. Dr. Bruce L. Clark, of the University of California; Dr. G. Dallas Hanna, of the California Academy of Sciences; Dr. H. A. Pilsbry, of the Philadelphia Academy of Natural Sciences; and Dr. W. D. Matthew, of the American Museum of Natural History, generously loaned type specimens and other material. Doctor Clark and Doctor Hanna also gave information concerning the Tertiary species from California. Mr. Ralph B. Stewart, of the University of California, read the manuscript, and I have taken advantage of his suggestions. I am also indebted to Mr. L. R. Cox, of the British Museum, for information relating to the fossil species from Persia, Zanzibar, and Burma, and to Dr. Axel A. Olsson, of the International Petroleum Co., for data concerning undescribed Tertiary species from Peru.

  19. Sutorius: a new genus for Boletus eximius.

    Science.gov (United States)

    Halling, Roy E; Nuhn, Mitchell; Fechner, Nigel A; Osmundson, Todd W; Soytong, Kasem; Arora, David; Hibbett, David S; Binder, Manfred

    2012-01-01

    Sutorius is described as a new genus of Boletaceae to accommodate Boletus robustus originally named illegitimately by C.C. Frost from eastern North America. The legitimate name, Boletus eximius, provided by C.H. Peck, has been used since for a dark purple to chocolate brown bolete with finely scaly stipe and reddish brown spore deposit. This iconic taxon has been documented on five continents. Despite the straightforward species identification from morphology, the interpretation of stipe macro-morphology and spore color has led to equivocal generic placement. Phylogenetic analyses of genes encoding large subunit rRNA and translation elongation factor 1α confirm Sutorius as a unique generic lineage in the Boletaceae. Two species are recognized based on multiple accessions: S. eximius, represented by collections from North America, Costa Rica, Guyana, Indonesia and Japan (molecular data are lacking for only the Guyanan and Japanese material); and S. australiensis, represented by material from Queensland, Australia. Additional collections from Zambia and Thailand represent independent lineages, but sampling is insufficient to describe new species for these entities.

  20. Functional proteomics within the genus Lactobacillus.

    Science.gov (United States)

    De Angelis, Maria; Calasso, Maria; Cavallo, Noemi; Di Cagno, Raffaella; Gobbetti, Marco

    2016-03-01

    Lactobacillus are mainly used for the manufacture of fermented dairy, sourdough, meat, and vegetable foods or used as probiotics. Under optimal processing conditions, Lactobacillus strains contribute to food functionality through their enzyme portfolio and the release of metabolites. An extensive genomic diversity analysis was conducted to elucidate the core features of the genus Lactobacillus, and to provide a better comprehension of niche adaptation of the strains. However, proteomics is an indispensable "omics" science to elucidate the proteome diversity, and the mechanisms of regulation and adaptation of Lactobacillus strains. This review focuses on the novel and comprehensive knowledge of functional proteomics and metaproteomics of Lactobacillus species. A large list of proteomic case studies of different Lactobacillus species is provided to illustrate the adaptability of the main metabolic pathways (e.g., carbohydrate transport and metabolism, pyruvate metabolism, proteolytic system, amino acid metabolism, and protein synthesis) to various life conditions. These investigations have highlighted that lactobacilli modulate the level of a complex panel of proteins to growth/survive in different ecological niches. In addition to the general regulation and stress response, specific metabolic pathways can be switched on and off, modifying the behavior of the strains. © 2016 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

  1. Color evolution in the hummingbird genus coeligena.

    Science.gov (United States)

    Parra, Juan Luis

    2010-02-01

    The remarkable diversity of coloration and species present in hummingbirds has been considered the result of sexual selection. I evaluate if color differences among species in the genus Coeligena are consistent with expectations from sexual selection theory. If sexual selection on color is important for speciation, closely related species should be markedly different in the colors of feather patches associated with aggression and breeding. I evaluate this prediction through a statistical assessment of the phylogenetic signal of colors from five feather patches: crown, gorget, belly, upper back, and rump. The first two are associated with aggressive and courtship displays and are expected to be under sexual selection, whereas the others are not. Contrary to expectations, the crown and gorget were the only patches with significant phylogenetic signal. Furthermore, I assess if populations of dichromatic species are more divergent in coloration and therefore have reduced gene flow. Color distances among dichromatic subspecies were larger than among monochromatic subspecies, but the magnitude of phenotypic differentiation was not related to levels of gene flow. These results support a role for sexual selection in shaping color variation among populations, but these differences alone are not sufficient to explain speciation.

  2. The genus Plectranthus in India and its chemistry.

    Science.gov (United States)

    Waldia, Shobha; Joshi, Bipin C; Pathak, Uma; Joshi, Mukesh C

    2011-02-01

    Phytochemical constituents isolated from Indian species of the genus Plectranthus reported up to 2009 are compiled. In India, the genus Plectranthus is found in all the habitats and altitudes, particularly in the Himalaya, the Southern Ghats, and the Nilgiri region. P. amboinicus, P. barbatus, P. caninus, P. mollis, P. coetsa, and P. incanus are the most common species found in India. Phytochemical studies of the genus revealed that Indian Plectranthus species are rich in essential oil, and that the most abundant secondary metabolites are diterpenoids, i.e., labdanes, abietanes, and ent-kauranes, as well as triterpenoids. Copyright © 2011 Verlag Helvetica Chimica Acta AG, Zürich.

  3. Diversity of secondary metabolites from Genus Artocarpus (Moraceae

    Directory of Open Access Journals (Sweden)

    ALIEFMAN HAKIM

    2010-11-01

    Full Text Available Hakim A. 2010. The diversity of secondary metabolites from Genus Artocarpus (Moraceae. Nusantara Bioscience 2:146-156. Several species of the Artocarpus genus (Moraceae have been investigated their natural product. The secondary metabolites successfully being isolatad from Artocarpus genus consist of terpenoid, flavonoids, stilbenoid, arylbenzofuran, neolignan, and adduct Diels-Alder. Flavonoid group represent the compound which is the most found from Artocarpus plant. The flavonoids compound which are successfully isolated from Artocarpus plant consist of the varied frameworks like chalcone, flavanone, flavan-3-ol, simple flavone, prenylflavone, oxepinoflavone, pyranoflavone, dihydrobenzoxanthone, furanodihydrobenzoxanthone, pyranodihydrobenzoxanthone, quinonoxanthone, cyclopentenoxanthone, xanthonolide, dihydroxanthone.

  4. The genus Eustigmaeus Berlese (Acari: Stigmaeidae) from Greece.

    Science.gov (United States)

    Stathakis, Theodoros I; Kapaxidi, Eleftheria V; Papadoulis, Georgios Th

    2016-11-13

    The present study summarizes the previous limited knowledge on the genus Eustigmaeus from Greece. Based on material collected from many localities, nine species are recorded from Greece for the first time and four species, Eustigmaeus irregularis sp. nov., E. fantinoui sp. nov., E. microvacuolatus sp. nov., and E. capitatus sp. nov. are described as new to science. Additionally, males of five known species of Eustigmaeus are described for the first time. A list of the world species of the genus Eustigmaeus and a key to species of this genus recorded in Greece are provided.

  5. On the toroidal compactifications of bosonic strings in higher genus

    International Nuclear Information System (INIS)

    Semikhatov, A.M.

    1989-01-01

    For the bosonic string in a higher genus, compactified on the maximal torus of a simply laced Lie group, we discuss a possibility to construct an operator formalism involving only those operators that are well-defined globally over the whole Riemann surface. We find, in particular, higher genus extensions of (some combinations of) the vertex operators for the Kac-Moody algebra. This allows us to derive the relation between the Sugawara and Virasoro constructions of the energy-momentum tensor on Riemann surfaces, and to propose an operator mechanism underlying the construction of group current correlation functions in higher genus. (orig.)

  6. Coulomb-gas representation on higher-genus surfaces

    International Nuclear Information System (INIS)

    Bagger, J.; Goulian, M.

    1990-01-01

    In this paper we use the Coulomb-gas approach to construct the minimal-model conformal blocks on higher-genus Riemann surfaces. We define the higher-genus blocks by sewing, and write them in terms of the rational blocks of a compactified scalar field. We show that spurious states decouple, which implies that the blocks degenerate correctly. As an example, we compute the genus-two partition function, and verify modular invariance for the subset of minimal models which only require one type of screening charge. (orig.)

  7. Australian mycophagous species of the genus Deplorothrips (Thysanoptera, Phlaeothripinae).

    Science.gov (United States)

    Mound, Laurence A; Tree, Desley J

    2016-12-16

    The genus Deplorothrips Mound & Walker is recorded from Australia for the first time. The genus is found widely across the continent, and descriptions and an illustrated identification key are provided to 14 new species. These have been found living on dead twigs and branches, particularly of Eucalyptus trees. Typical members of this genus have short maxillary stylets that are scarcely retracted into the head capsule, but some of the species have more deeply retracted stylets. Structural polymorphism is recorded in several species, associated both with sex and with body size. Remarkable variation is recorded for some species in the number of sense cones on the antennal segments.

  8. Comparative Genomics Reveals High Genomic Diversity in the Genus Photobacterium

    DEFF Research Database (Denmark)

    Machado, Henrique; Gram, Lone

    2017-01-01

    Vibrionaceae is a large marine bacterial family, which can constitute up to 50% of the prokaryotic population in marine waters. Photobacterium is the second largest genus in the family and we used comparative genomics on 35 strains representing 16 of the 28 species described so far, to understand...... the genomic diversity present in the Photobacterium genus. Such understanding is important for ecophysiology studies of the genus. We used whole genome sequences to evaluate phylogenetic relationships using several analyses (16S rRNA, MLSA, fur, amino-acid usage, ANI), which allowed us to identify two...

  9. Brucellosis of the common vole (Microtus arvalis)

    Czech Academy of Sciences Publication Activity Database

    Hubálek, Zdeněk; Scholz, H.; Sedláček, I.; Melzer, F.; Sanogo, Yibayiri Osée; Nesvadbová, Jiřina

    2007-01-01

    Roč. 7, č. 4 (2007), s. 679-688 ISSN 1530-3667 Institutional research plan: CEZ:AV0Z60930519 Keywords : common vole * brucellosis Subject RIV: GJ - Animal Vermins ; Diseases, Veterinary Medicine Impact factor: 1.919, year: 2007

  10. Some adaptational peculiarities of introduced species of the genus Hydrangea

    Directory of Open Access Journals (Sweden)

    V. N. Kuchma

    2006-03-01

    Full Text Available Among studied the Hydrangea L. genus the species, which most adapted to the environment of steppe conditions, were developed. H. cinerea Stall. and H. bretschneider Dipp. are recommended for use in laying out of parks, etc.

  11. Occurrence of genus Monostroma (Ulvales, Chlorophyta) from Ratnagiri (Maharashtra)

    Digital Repository Service at National Institute of Oceanography (India)

    Untawale, A.G.; Agadi, V.V.; Dhargalkar, V.K.

    The occurrence of a genus Monostroma has been recorded from the Shirgaon creek at Ratnagiri along the central west coast of India. The Monostroma sp. was found in the brackish water environment with low salinity, high nutrients and thick mangrove...

  12. [Molecular identification in genus of Lilium based on DNA barcoding].

    Science.gov (United States)

    Zheng, Si-Hao; Li, Ya-Kang; Ren, Wei-Guang; Huang, Lin-Fang

    2014-12-01

    To establish a new method for identifying genus of Lilium by DNA barcoding technology, ITS, ITS2, psbA-trnH, matK and rbcL sequences were analyzed in term of variation of inter- and intra-species, barcoding gap, neighbor-joining tree to distinguish genus of Lilium based on 978 sequences from experimental and GenBank database, and identification efficiency was evaluated by Nearest distance and BLAST1 methods. The results showed that DNA barcoding could identify different species in genus of Lilium. ITS sequence performed higher identification efficiency, and had significant difference between intra- and inter-species. And NJ tree could also divide species into different clades. Results indicate that DNA barcoding can identify genus of Lilium accurately. ITS sequence can be the optimal barcode to identify species of Lilium.

  13. Contribution to the genus Xanthocorus Miyatake (Coleoptera, Coccinellidae, Chilocorini).

    Science.gov (United States)

    Li, Wenjing; Chen, Xiaosheng; Wang, Xingmin; Ren, Shunxiang

    2015-01-01

    The genus Xanthocorus Miyatake, 1970 consists of three species from China, including two new species described here: Xanthocorusnigrosuturalis sp. n. and Xanthocorusmucronatus sp. n. A key to identification of species is given. Diagnoses, detailed descriptions, illustrations, and distributions are provided.

  14. A new genus of Smiliini (Hemiptera: Membracidae) from Costa Rica

    Science.gov (United States)

    A new genus and species, Smilirhexia naranja, is described from Costa Rica, the southern limit of the tribe Smiliini, and represents a strong divergence from the morphology of the oak-feeding genera prevalent in North America....

  15. A review on phytochemistry and ethnopharmacological aspects of genus Calendula

    Science.gov (United States)

    Arora, Disha; Rani, Anita; Sharma, Anupam

    2013-01-01

    This review includes 84 references on the genus Calendula (Asteraceae) and comprises ethnopharmacology, morphology and microscopy, phytoconstituents, pharmacological reports, clinical studies and toxicology of the prominent species of Calendula. Triterpene alcohols, triterpene saponins, flavonoids, carotenoids and polysaccharides constitute major classes of phytoconstituents of the genus. A few species of this genus have medicinal value, among these Calendula officinalis Linn., has been traditionally used in the treatment of various skin tumors, dermatological lesions, ulcers, swellings and nervous disorders as well as almost 200 cosmetic formulations, i.e., creams, lotions, shampoos. Despite a long tradition of use of some species, the genus has not been explored properly. In the concluding part, the future scope of Calendula species has been emphasized with a view to establish their multifarious biological activities and mode of action. PMID:24347926

  16. A new genus and species of Ceratocanthidae from Tanzania ...

    African Journals Online (AJOL)

    Coleoptera: Scarabaeoidea) from the Usambara Mountains (Tanzania), is described. The morphology of the clypeus and mesoepisternum is discussed, also with reference to other Ceratocanthidae. The affinities of the genus are discussed, and ...

  17. BRST quantization of superconformal theories on higher genus Riemann surfaces

    International Nuclear Information System (INIS)

    Leman Kuang

    1992-01-01

    A complex contour integral method is constructed and applied to the Becchi-Rouet-Stora-Tyutin (BRST) quantization procedure of string theories on higher genus Riemann surfaces with N=0 and 1 Krichever-Novikov (KN) algebras. This method makes calculations very simple. It is shown that the critical spacetime dimension of the string theories on a genus-g Riemann surface equals that of the string theories on a genus-zero Riemann surface, and that the 'Regge intercepts' in the genus-g case are α(g)=1-3/4g-9/8g 2 and 1/2-3/4g-17/16g 2 for bosonic strings and superstrings, respectively. (orig.)

  18. New evidence of homoplasy within the African genus Varicorhinus ...

    African Journals Online (AJOL)

    New evidence of homoplasy within the African genus Varicorhinus (Cyprinidae): an independent origin of specialized scraping forms in the adjacent drainage systems of Ethiopia inferred from mtDNA analysis.

  19. Higher genus correlators from the hermitian one-matrix model

    International Nuclear Information System (INIS)

    Ambjoern, J.; Chekhov, L.; Makeenko, Yu.

    1992-01-01

    We develop an iterative algorithm for the genus expansion of the hermitian NxN one-matrix model (is the Penner model in an external field). By introducing moments of the external field, we prove that the genus g contribution to the m-loop correlator depends only on 3g-2+m lower moments (3g-2 for the partition function). We present the explicit results for the partition function and the one-loop correlator in genus one. We compare the correlators for the hermitian one-matrix model with those at zero momenta for c=1 CFT and show an agreement of the one-loop correlators for genus zero. (orig.)

  20. Evolution and host specificity in the ectomycorrhizal genus Leccinum

    NARCIS (Netherlands)

    Bakker, den H.C.; Zuccarello, G.C.; Kuyper, T.W.; Noordeloos, M.E.

    2004-01-01

    Species of the ectomycorrhizal genus Leccinum are generally considered to be host specialists. We determined the phylogenetic relationships between species of Leccinum from Europe and North America based on second internal transcribed spacer (ITS2) and glyceraldehyde 3-phosphate dehydrogenase

  1. Comparative Genomics of Bacteriophage of the Genus Seuratvirus

    DEFF Research Database (Denmark)

    Sazinas, Pavelas; Redgwell, Tamsin; Rihtman, Branko

    2017-01-01

    Despite being more abundant and having smaller genomes than their bacterial host, relatively few bacteriophages have had their genomes sequenced. Here, we isolated 14 bacteriophages from cattle slurry and performed de novo genome sequencing, assembly, and annotation. The commonly used marker genes...... polB and terL showed these bacteriophages to be closely related to members of the genus Seuratvirus. We performed a core-gene analysis using the 14 new and four closely related genomes. A total of 58 core genes were identified, the majority of which has no known function. These genes were used...... to construct a core-gene phylogeny, the results of which confirmed the new isolates to be part of the genus Seuratvirus and expanded the number of species within this genus to four. All bacteriophages within the genus contained the genes queCDE encoding enzymes involved in queuosine biosynthesis. We suggest...

  2. Variaciones nucleotídicas de dos grupos de tepezcuintles, Agouti paca (Rodentia: Agoutidae, en cautiverio provenientes de dos localidades de Yucatán, México

    Directory of Open Access Journals (Sweden)

    Rubén C Montes-Pérez

    2006-09-01

    Full Text Available Estimamos las variaciones nucleotídicas entre dos grupos de tepezcuintles (Agouti paca provenientes de los estados de Campeche y Quintana Roo, México y, dentro de cada grupo. Se colectaron muestras sanguíneas de once A. paca mantenidos en cautiverio. El ADN de leucocitos se utilizó para efectuar la amplificación aleatoria de polimorfismos de ADN (RAPD. Se seleccionaron los iniciadores número tres 5’ -d(GTAGACCCGT-3’ y seis 5’ -d(CCCGTCAGCA-3’ del estuche (Ready.To.Go. RAPD Analysis Beads, Amersham Pharmacia Biotech, porque produjeron un adecuado número de bandas. Los patrones electroforéticos de bandas fueron procesados con el software para análisis filogenético basado en el método de UPGMA para estimar la variación nucleotídica. El árbol filogenético obtenido con el iniciador tres reveló una agrupación dicotómica entre los animales de ambos estados de la Península de Yucatán, con un valor de divergencia de 1.983 nucleótidos de cada cien. Los animales de Quintana Roo mostraron un agrupamiento con el iniciador seis y, otro grupo más con animales procedentes de Campeche. La variación nucleotídica entre estos dos grupos fue de 2.118 nucleótidos por cada cien. Las variaciones nucleotídicas dentro de los grupos procedentes de ambos estados, para los dos iniciadores, mostraron valores que fluctuaron entre 0.46 y 1.68 nucleótidos de cada cien, lo cual indica que la variación nucleotídica entre los dos grupos de animales es alrededor de dos nucleótidos por cada cien y, dentro de grupos es menor a 1.7 nucleótidos por cada cien.Nucleotidic variations of two captive groups of tepezcuintle, Agouti paca (Rodentia: Agoutidae, from two sites in Yucatan, Mexico. The objective of this work was to estimate the nucleotidic variation between two groups of tepezcuintles (Agouti paca from the states of Campeche and Quintana Roo, Mexico and within members of each group. Blood samples were collected from eleven A. paca kept in

  3. Ecología poblacional del ratón Peromyscus mexicanus (Rodentia: Muridae en el Parque Nacional Volcán Poás, Costa Rica

    Directory of Open Access Journals (Sweden)

    Licidia Rojas Rojas

    2007-12-01

    Full Text Available Se estudió el tamaño poblacional, la proporción de sexos, el peso y el número de adultos e inmaduros de Peromyscus mexicanus en tres sitios, durante 14 meses, en el Parque Nacional volcán Poás, Costa Rica. Se colocaron 30 trampas Sherman en cada sitio, para un estudio de captura-recaptura durante seis días consecutivos de cada mes, desde marzo de 2002 hasta abril de 2003. Se hicieron 2 393 capturas, hallándose en Tierra Fría, además de P. mexicanus, Reithrodontomys creper, R. rodriguezi, Scotinomys teguina y Oryzomys devius (Muridae. En Potrero Grande se capturaron P. mexicanus, R. creper, R. sumichrasti, S. teguina y O. devius. En Canto de las Aves se capturaron P. mexicanus, R. creper, R. rodriguezi y O. devius. El 34.77 % del total de ratones capturados fueron P. mexicanus. Se capturaron en promedio 34 individuos por mes por hectárea en Tierra Fría y 11 en Potrero Grande; en Canto de las Aves sólo se capturaron 4 individuos en todo el muestreo. El tamaño estimado de la población de P. mexicanus no varió mensualmente en Tierra Fría, pero si en Potrero Grande. No se observó variación en la proporción de sexos en ninguno de los dos sitios. El valor promedio de peso en Tierra Fría fue de 43.83+1.93 g machos 39.29+2.07 g hembras. En Potrero Grande fue 43.54+3.42 g machos y 42.08+3.45 g hembras. En ninguno de los dos sitios se encontraron diferencias en la cantidad de individuos inmaduros a través del tiempo.Population ecology of the mouse Peromyscus mexicanus (Rodentia: Muridae in Poas Volcano National Park, Costa Rica. The Mexican Deer Mouse has been reported as an abundant wild mouse in Costa Rica; nevertheless, it has not been studied as well as other Peromyscus species. Thirty Sherman traps were placed on three habitats during six consecutive days of each month, from March 2002 through April 2003 in three sites of Poás volcano National Park, Costa Rica. A total of 2 393 mice were captured. Other species such as

  4. Warionia (Asteraceae: a relict genus of Cichorieae?

    Directory of Open Access Journals (Sweden)

    Katinas, Liliana

    2008-12-01

    Full Text Available The genus Warionia, with its only species W. saharae, is endemic to the northwestern edge of the African Sahara desert. This is a somewhat thistle-like aromatic plant, with white latex, and fleshy, pinnately- partite leaves. Warionia is in many respects so different from any other genus of Asteraceae, that it has been tentatively placed in the tribes Cardueae, Cichorieae, Gundelieae, and Mutisieae. Until now, a comprehensive study of Warionia to have a complete context for discussing its taxonomic position is lacking. The general morphology, anatomy, palynology and chromosome number of W. saharae are investigated here, and the species is described and illustrated. Laticifers in leaves and stems indicate a relationship with Cichorieae, and are associated with the phloem, in contact with it or with the surrounding sclerenchyma sheath. The pollen features indicate a strong relation with Cardueae, namely the structure with Anthemoid pattern where the columellae are joined to the foot layer, the ectosexine with thin columellae, the endosexine with stout and ramified columellae, the conspicuous spines with globose bases and conspicuous apical channels, and the tectum surface very perforate. Chromosomal counts resulted in 2n = 34. The morphological and palynological evidence positions Warionia between the tribes Cardueae and Cichorieae suggesting that it could be a remnant of the ancestral stock that gave rise to both tribes.El género Warionia, y su única especie, W. saharae, es endémico del noroeste del desierto africano del Sahara. Es una planta semejante a un cardo, aromática, con látex blanco y hojas carnosas, pinnatipartidas. Warionia es tan diferente de otros géneros de Asteraceae que fue ubicada en las tribus Cardueae, Cichorieae, Gundelieae y Mutisieae. Hasta ahora, no existía un estudio global de Warionia como contexto para discutir su posición taxonómica. Se ha investigado aquí su morfología, anatomía, palinología y n

  5. The Genus Asparagus in Southern Africa*

    Directory of Open Access Journals (Sweden)

    J. P. Jessop

    1966-11-01

    Full Text Available A revision of the genus Asparagus in South Africa, South West Africa, Bechuanaland, Basutoland, and Swaziland has been undertaken. Notes are given on the value of most o f the characters which have been used in the separation of species, recent literature on the nature of  Asparagus assimilatory organs, and a technique for the examination of chromosomes. Chromosome counts are listed for ten taxa. There is a key to the forty species and four varieties. In the main part of the work these taxa are described, and their synonymy, taxonomy, distribution and habitats dealt with. Six species and one variety are new. The following are the new species and combinations:  A. setaceus (Kunth (Asparagopsis setacea Kunth, A. mueronatus, A. macowanii Bak. var. zuluensis (N. E. Br.  (A. zuluensis N. E. Br., A. rigidus, A. densiflorus (Kunth  {Asparagopsis densiflora Kunth,  A. aethiopicus L. var. angusticladus, A. falcatus L. var. ternifolius (Bak.  (A. aethiopicus L. var.  ternifolius Bak.,  A. aspergillus,  A. obermeyerae,  A. krebsianus (Kunth (Asparagopsis krebsiana Kunth,  A. acocksii.  A. crassicladus. Several plants o f horticultural importance occur in South Africa. The three best known are A. plumosus, which is reduced here to synonymy under  A. setaceus (Kunth Jessop, and  A. sprengeri and  A. myersii. A. sprengeri is being reduced to synonymy under  A. densiflorus (Kunth Jessop,.  A. myersii, which is a  nomen nudum, is also regarded as belonging to  A. densiflorus.

  6. The Exiguobacterium genus: biodiversity and biogeography

    Energy Technology Data Exchange (ETDEWEB)

    Vishnivetskaya, Tatiana A [ORNL; Kathariou, Sophia [North Carolina State University; Tiedje, James M. [Michigan State University, East Lansing

    2009-01-01

    Abstract. Bacteria of the genus Exiguobacterium are low G + C, Gram-positive facultative anaerobes that have been repeatedly isolated from ancient Siberian permafrost. In addition, Exiguobacterium spp. have been isolated from markedly diverse sources, including Greenland Glacial ice, hot springs at Yellowstone National Park, the rhizosphere of plants, and the environment of food processing plants. Strains of this hereto little known bacterium that have been retrieved from such different (and often extreme) environments are worthy of attention as they are likely to be specifically adapted to such environments and to carry variations in the genome which may correspond to psychrophilic and thermophilic adaptations. However, comparative genomic investigations of Exiguobacterium spp. from different sources have been limited. In this study, we employed different molecular approaches for the comparative analysis of 24 isolates from markedly diverse environments including ancient Siberian permafrost and hot springs at Yellowstone National Park. Pulsed-field gel electrophoresis (PFGE) with I-CeuI (an intron-encoded endonuclease), AscI and NotI were optimized for the determination of genomic fingerprints of nuclease-producing isolates. The application of a DNA macroarray for 82 putative stress-response genes yielded strain-specific hybridization profiles. Cluster analyses of 16S rRNA gene sequence data, PFGE I-CeuI restriction patterns and hybridization profiles suggested that Exiguobacterium strains formed two distinct divisions that generally agreed with temperature ranges for growth. With few exceptions (e.g., Greenland ice isolate GIC31), psychrotrophic and thermophilic isolates belonged to different divisions.

  7. Revision of the Genus Piestoneus SHARP (Coleoptera : Staphylinidae) from Japan

    OpenAIRE

    ShunIchiro, NAOMI; Natural History Museum and Institute

    1995-01-01

    This is the fourth part on a series of the taxonomic studies of the subfamily Piestinae from Japan, and the genus Piestoneus SHARP is treated. Three new species, Piestoneus deboiseae, P. monticola and P. oharai are described. The lectotype is designated for P. lewisii SHARP. A key to the species is provided. The important characters for the definition of the genus and the aedeagi for identification are illustrated.

  8. Polypores and genus concepts in Phanerochaetaceae (Polyporales, Basidiomycota

    Directory of Open Access Journals (Sweden)

    Otto Miettinen

    2016-12-01

    Full Text Available We explored whether DNA-phylogeny-based and morphology-based genus concepts can be reconciled in the basidiomycete family Phanerochaetaceae. Our results show that macromorphology of fruiting bodies and hymenophore construction do not reflect monophyletic groups. However, by integrating micromorphology and re-defining genera, harmonization of DNA phylogeny and morphological genus concepts is possible in most cases. In the case of one genus (Phlebiopsis, our genetic markers could not resolve genus limits satisfactorily and a clear morphological definition could not be identified. We combine extended species sampling, microscopic studies of fruiting bodies and phylogenetic analyses of ITS, nLSU and rpb1 to revise genus concepts. Three new polypore genera are ascribed to the Phanerochaetaceae: Oxychaete gen. nov. (type Oxyporus cervinogilvus, Phanerina gen. nov. (type Ceriporia mellea, and Riopa (including Ceriporia metamorphosa and Riopa pudens sp. nov.. Phlebiopsis is extended to include Dentocorticium pilatii, further species of Hjortstamia and the monotypic polypore genus Castanoporus. The polypore Ceriporia inflata is combined into Phanerochaete. The identity of the type species of the genus Riopa, R. davidii, has been misinterpreted in the current literature. The species has been included in Ceriporia as a species of its own or placed in synonymy with Ceriporia camaresiana. The effort to properly define R. davidii forced us to study Ceriporia more widely. In the process we identified five closely related Ceriporia species that belong to the true Ceriporia clade (Irpicaceae. We describe those species here, and introduce the Ceriporia pierii group. We also select a lectotype and an epitype for Riopa metamorphosa and neotypes for Sporotrichum aurantiacum and S. aurantium, the type species of the anamorphic genus Sporotrichum, and recommend that teleomorphic Riopa is conserved against it.

  9. A new genus Mesophlaeoba (Orthoptera: Acrididae: Acridinae from India

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    H. Kumar

    2015-04-01

    Full Text Available A new genus of Acridinae, Mesophlaeoba Kumar and Usmani gen. n. based on type species Mesophlaeoba usmanii Kumar and Usmani sp. n., is described and illustrated from India. The description was based on both conventional morphological and genital characters. The new genus is closely related to Phlaeoba Stal, 1861 but differs from it in presence of filiform antennae, absence of median carinula of fastigium of vertex and rounded posterior margin of pronotum.

  10. Genus-two correlators for critical Ising model

    International Nuclear Information System (INIS)

    Behera, N.; Malik, R.P.; Kaul, R.K.

    1989-01-01

    The characters and one- and two-point correlators for the critical Ising model on a genus-two Riemann surface have been obtained using their modular transformation properties and the factorization properties in the pinching limit of the zero-homology cycle of the surface. The procedure can easily be generalized to higher-genus Riemann surfaces and also to other rational conformal field theories

  11. Elliptic genus of singular algebraic varieties and quotients

    Science.gov (United States)

    Libgober, Anatoly

    2018-02-01

    This paper discusses the basic properties of various versions of the two-variable elliptic genus with special attention to the equivariant elliptic genus. The main applications are to the elliptic genera attached to non-compact GITs, including the theories regarding the elliptic genera of phases on N  =  2 introduced in Witten (1993 Nucl. Phys. B 403 159-222).

  12. On genus-two solutions for the ILW equation

    Science.gov (United States)

    Tutiya, Y.

    2018-02-01

    The existence of theta function solutions of genus two for the intermediate long-wave equation is established. A numerical example is also presented. The method basically goes along with Krichever's construction of theta function solutions for soliton equations, such as the Kronecker product equation. This idea leads us to a question whether a Riemann surface exists which allows a peculiar abelian integral of the third kind. The answer is affirmative at least for genus-two curves.

  13. Revision of the genus Trypeticus Marseul (Coleoptera: Histeridae)

    OpenAIRE

    Kanaar, P.

    2003-01-01

    The genus Trypeticus Marseul, 1864 is revised and figured. A key to the species is given. Redescriptions of the hitherto described species are presented. The number of species in this genus has been brought up to 100, of which 72 species are described as new: T. adebratti (Sabah, Brunei), T. alticola (Indonesia: Irian Jaya), T. angustifrons (Indonesia: Irian Jaya?), T. arriagadai (Philippines), T. aukei (W. Malaysia, Sabah), T. bertiae (India), T. boukei (Sabah), T. brevis (Sabah), T. capilla...

  14. Higher Genus Abelian Functions Associated with Cyclic Trigonal Curves

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    Matthew England

    2010-03-01

    Full Text Available We develop the theory of Abelian functions associated with cyclic trigonal curves by considering two new cases. We investigate curves of genus six and seven and consider whether it is the trigonal nature or the genus which dictates certain areas of the theory. We present solutions to the Jacobi inversion problem, sets of relations between the Abelian function, links to the Boussinesq equation and a new addition formula.

  15. The genus Clematis (Ranunculaceae): chemical and pharmacological perspectives.

    Science.gov (United States)

    Chawla, Rakesh; Kumar, Suresh; Sharma, Anupam

    2012-08-30

    Twenty six species of the genus Clematis (Ranunculaceae) have been traditionally used in various systems of medicine for the treatment of ailments such as nervous disorders, syphilis, gout, malaria, dysentry, rheumatism, asthma, and as analgesic, anti-inflammatory, diuretic, antitumour, antibacterial and anticancer. To emphasize on ethnopharmacology, chemical constituents, pharmacology, toxicology and clinical studies of various species of the genus Clematis. The available information on Clematis species was collected through electronic search of major scientific databases. A survey of literature revealed that triterpene saponins, alkaloids, flavonoids, lignans, steroids, coumarins, macrocyclic compounds, phenolic glycosides, anemonin and volatile oils constitute major classes of chemical constituents in the genus Clematis. Preliminary analgesic, anticancer, anti-inflammatory, diuretic, antiarthritis, hepatoprotective, hypotensive and HIV-1 protease inhibitor activity studies have been carried out on crude extracts of 26 traditionally used and medicinally promising species of Clematis genus. The species of the genus Clematis emerged as good source of traditional medicine for the treatment of various ailments. Although few experimental studies validated their traditional claims, but employed uncharacterized crude extracts. Such Clematis species need to be explored properly following bioactivity-directed fractionation with a view to isolate bioactive constituents, and to evaluate their possible mode of actions. These species hold great potential for detailed clinical studies so that these could be exploited as potential drugs. The review will help researchers to select medicinally potential species of Clematis genus for future research. Copyright © 2012 Elsevier Ireland Ltd. All rights reserved.

  16. Hayata glandulifera (Orchidaceae, New Genus and Species From Northern Vietnam

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    Leonid V. Averyanov

    2009-11-01

    Full Text Available New orchid related to Cheirostylis, Goodyera, Rhomboda and Zeuxine discovered in lowland central part of northern Vietnam is described in rank of separate genus Hayata. Proposed genus differs from Goodyera in 2 separate lateral stigmas; in not hairy hypochile; in massive, knob-like mesochile and in large 2-lobed, dentate epichile. It differs from Cheirostylis in large flowers with completely free sepals (newer forming tube; in peculiar bunches of capitate glands on lateral walls of hypochile and in not swollen succulent rhizome forming normal adventitious roots, not modified into ridges or pillows covered by root hairs. From Rhomboda discovered genus differs in absence of any keels on the lip; in specific papillae bunches inside hypochile and in not winged column. New genus may be also close to Zeuxine, from which it differs in plant habit, large flowers, large dentate lobes of epichile and in specific shape of stelidia and rostellar arms. Described plant not fits well with any genera of subtribe Goodyerinae and certainly desires generic segregation. Besides Vietnamese plant, described genus includes H. tabiyahanensis from Taiwan and H. sherriffii from Bhutan. Standard taxonomical treatment of new genus and key for its species identification is presented in the paper.

  17. Phylogenomic re-assessment of the thermophilic genus Geobacillus.

    Science.gov (United States)

    Aliyu, Habibu; Lebre, Pedro; Blom, Jochen; Cowan, Don; De Maayer, Pieter

    2016-12-01

    Geobacillus is a genus of Gram-positive, aerobic, spore-forming obligate thermophiles. The descriptions and subsequent affiliations of the species in the genus have mostly been based on polyphasic taxonomy rules that include traditional sequence-based methods such as DNA-DNA hybridization and comparison of 16S rRNA gene sequences. Currently, there are fifteen validly described species within the genus. The availability of whole genome sequences has provided an opportunity to validate and/or re-assess these conventional estimates of genome relatedness. We have applied whole genome approaches to estimate the phylogenetic relatedness among the sixty-three Geobacillus strains for which genome sequences are currently publicly available, including the type strains of eleven validly described species. The phylogenomic metrics AAI (Average Amino acid Identity), ANI (Average Nucleotide Identity) and dDDH (digital DNA-DNA hybridization) indicated that the current genus Geobacillus is comprised of sixteen distinct genomospecies, including several potentially novel species. Furthermore, a phylogeny constructed on the basis of the core genes identified from the whole genome analyses indicated that the genus clusters into two monophyletic clades that clearly differ in terms of nucleotide base composition. The G+C content ranges for clade I and II were 48.8-53.1% and 42.1-44.4%, respectively. We therefore suggest that the Geobacillus species currently residing within clade II be considered as a new genus. Copyright © 2016 Elsevier GmbH. All rights reserved.

  18. Topological classification and enumeration of RNA structures by genus.

    Science.gov (United States)

    Andersen, J E; Penner, R C; Reidys, C M; Waterman, M S

    2013-11-01

    To an RNA pseudoknot structure is naturally associated a topological surface, which has its associated genus, and structures can thus be classified by the genus. Based on earlier work of Harer-Zagier, we compute the generating function Dg,σ (z) = ∑n dg,σ (n)zn for the number dg,σ (n) of those structures of fixed genus g and minimum stack size σ with n nucleotides so that no two consecutive nucleotides are basepaired and show that Dg,σ (z) is algebraic. In particular, we prove that dg,2(n) ∼ kg n3(g−1/2 )γ n2, where γ2 ≈ 1.9685. Thus, for stack size at least two, the genus only enters through the sub-exponential factor, and the slow growth rate compared to the number of RNA molecules implies the existence of neutral networks of distinct molecules with the same structure of any genus. Certain RNA structures called shapes are shown to be in natural one-to-one correspondence with the cells in the Penner-Strebel decomposition of Riemann's moduli space of a surface of genus g with one boundary component, thus providing a link between RNA enumerative problems and the geometry of Riemann's moduli space.

  19. The Representatives of Amelanchier Medik. Genus in Ukraine

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    Opalko Anatoliy Ivanovich

    2015-04-01

    Full Text Available The information on fruit and decorative value, honey and medicinal properties of the genus Amelanchier Medik. is generalized. Their biological characteristics, chemical composition and palatability traits of the fruit, the ways of consumption and processing, including drying, preparing juices, syrups, jams, candied fruit jellies, confiture, and fruit wine are specified. The environmental adaptability and effectiveness of using juneberry for phytomelioration are mentioned. Several versions of the origin of the genus Amelanchier name and interpretation of its specific epithets are described. The controversial issues of the genus Amelanchier system were discussed from the classical and molecular genetic approaches. The attention is focused on two main aspects of views on the place of the genus Amelanchier representatives of the family Rosaceae Juss. within the particular subfamily, namely the subfamily Pyroideae Burnett (Maloideae S. Weber or the subfamily Amygdaloideae Arn., which indicates the necessity for further comparative morphological and molecular genetic studies of the family Rosaceae. The directions of evolution, habitat and invasive ability of some species of the genus Amelanchier are characterised. The list of the genus Amelanchier representatives cultivated in Ukraine is given.

  20. The genus Rhaponticum in East Asia

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    Gorovoy, P.

    2010-12-01

    Full Text Available The genus Rhaponticum in East Asia has always been a taxon for discussion. Rhaponticum carthamoides from East Siberia comprises three subspecies: carthamoides, chamarensis and orientale. Even though they differ in morphology, they do not have isolated areas. Rhaponticum satzyperovii was recently described and its author pointed out its affinity with Rh. uniflorum. Plant height, stem indumentum, and radical and stem leaf dissection were signaled as the diagnostic characters. Our present study on living and herbarium specimens of Rh. satzyperovii shows that the diagnostic characters are not consistent. The species area was also claimed to be an argument for considering Rh. satzyperovii a distinct species. This area covers the south of the Primorye Province in the Far East of Russia with some locations in the adjacent Jewish Autonomous Region and in China. In our study, the area of Rh. satzyperovii is found to be within the area of Rh. uniflorum and thereafter they turned out to have no disjunction. In East Asia, Rh. uniflorum is characterized by a wide range of morphological variability. We suggest that Rh. satzyperovii should be included within Rh. uniflorum without any taxonomic rank.El género Rhaponticum en el Este de Asia ha sido siempre un taxón discutido. Rhaponticum carthamoides del Este de Siberia incluye tres subespecies: carthamoides, chamarensis y orientale. Aunque difieren en su morfología, sus áreas no están aisladas. Rhaponticum satzyperovii fue descrito recientemente y su autor señaló su afinidad con Rh. uniflorum. Los caracteres diagnósticos fueron la altura de la planta, el indumento del tallo y las divisiones de las hojas basales y caulinares. Nuestro estudio de plantas vivas y muestras de herbario de Rh. satzyperovii muestra que los caracteres diagnósticos no son consistentes. El área de distribución también se argumentó para considerar Rh. satzyperovii una especie diferente. El área cubre el sur de la provincia de

  1. Proposal of nine novel species of the genus Lysinimicrobium and emended description of the genus Lysinimicrobium.

    Science.gov (United States)

    Hamada, Moriyuki; Shibata, Chiyo; Saitou, Satomi; Tamura, Tomohiko; Komaki, Hisayuki; Ichikawa, Natsuko; Oguchi, Akio; Hosoyama, Akira; Fujita, Nobuyuki; Yamamura, Hideki; Hayakawa, Masayuki; Suzuki, Ken-Ichiro

    2015-12-01

    Thirteen novel Gram-stain-positive bacteria were isolated from various samples collected from mangrove forests in Japan, and their taxonomic positions were investigated by a polyphasic approach. Phylogenetic analyses based on 16S rRNA gene sequence comparisons showed that the 13 isolates formed a single clade with Lysinimicrobium mangrovi HI08-69T, with a similarity range of 97.6-99.5 %. The peptidoglycan of the isolates was of the A4α type with an interpeptide bridge comprising Ser-Glu and an l-Ser residue at position 1 of the peptide subunit. The predominant menaquinone was demethylmenaquinone DMK-9(H4) and the major fatty acid was anteiso-C15 : 0. These chemotaxonomic characteristics corresponded to those of the genus Lysinimicrobium. On the basis of the phenotypic and phylogenetic data, along with average nucleotide identity values among the isolates, we concluded that the 13 isolates should be assigned to the following nine novel species of the genus Lysinimicrobium: Lysinimicrobium aestuarii sp. nov. (type strain HI12-104T = NBRC 109392T = DSM 28144T), Lysinimicrobium flavum sp. nov. (type strain HI12-45T = NBRC 109391T = DSM 28150T), Lysinimicrobium gelatinilyticum sp. nov. (type strain HI12-44T = NBRC 109390T = DSM 28149T), Lysinimicrobium iriomotense sp. nov. (type strain HI12-143T = NBRC 109399T = DSM 28146T), Lysinimicrobium luteum sp. nov. (type strain HI12-123T = NBRC 109395T = DSM 28147T), Lysinimicrobium pelophilum sp. nov. (type strain HI12-111T = NBRC 109393T = DSM 28148T), Lysinimicrobium rhizosphaerae sp. nov. (type strain HI12-135T = NBRC 109397T = DSM 28152T), Lysinimicrobium soli sp. nov. (type strain HI12-122T = NBRC 109394T = DSM 28151T) and Lysinimicrobium subtropicum sp. nov. (type strain HI12-128T = NBRC 109396T = DSM 28145T). In addition, an emended description of the genus Lysinimicrobium is proposed.

  2. The chemistry and pharmacology of Cleome genus: A review.

    Science.gov (United States)

    Singh, Harpreet; Mishra, Amrita; Mishra, Arun Kumar

    2018-05-01

    Since ancient times, species of Cleome genus are used to cure various ailments in human beings and same is stated in traditional treatises. Each part of the plant has its own significance, therefore, in background of its significance, upto date information in systematic manner is required. The present review embarks on variety of naturally occurring compounds that have been isolated from various species of Cleome genus. The present study furnishes an overview of all naturally isolated compounds diterpenes, triterpenoids, trinorterpenoids, flavonol glycoside, coumarinolignoids, dipyridodiazepinone, essential oils, sesquiterpenes, flavonoids, carboxylic acid derivatives, lactone derivatives, sterols and pharmacological activities of various species of Cleome genus. These plants of Cleome genus are often used as conventional drugs to treat several ailments therefore information on analgesic, anti-inflammatory, antifungal, antimicrobial, anti-diarrheal, anticancer, anti-arthritic, hepatoprotective, antinociceptive, wound healing and psychopharmacological activity etc were compiled. Literature regarding the compounds isolated and pharmacological studies performed by various researchers in the last 40 years who worked on different species belonging to genus Cleome was summarized in the present review. On the basis of references, this review covers the phytochemistry and pharmacology of Cleome species, describing compounds previously reported current trends and future prospects. From a wellbeing point of view, species belonging toCleome genus presents an excellent option for curing variety of ailments in human beings due to its isolated phytocompounds that reveal significant biological activities or for developing a variety of new pharmaceutical products. The observed pharmacological activities and no toxicity profile of extracts obtained from species of Cleome genus support the statement that these extracts might be used in the formation of new formulations that can be

  3. An investigation of self-incompatibility within the genus Restrepia.

    Science.gov (United States)

    Millner, Helen J; McCrea, Alison R; Baldwin, Timothy C

    2015-03-01

    • The genus Restrepia (Orchidaceae) is indigenous to montane rain forests of Central and South America. Recently, as habitat has fragmented and wild populations dwindled, the chances for successful cross-pollination within the genus have been reduced. Since cultivated species of Restrepia have been vegetatively propagated, they remain genetically close to those in the wild, making ex situ collections of the genus useful model populations for investigating breeding systems. Restrepia are found in clade B of the Pleurothallidinae, the only clade in which self-incompatibility (SI) has not yet been confirmed. In the current study, private collections of Restrepia were used to study the operation of SI within the genus to assist future ex situ conservation of this and related genera.• A variety of self-pollination, intraspecific, and interspecific crosses were performed across the genus, and pollen tube growth was studied.• Individual species exhibited varying degrees of SI. Self-pollinations performed across 26 species in the genus produced few viable seeds, with the exception of R. aberrans. Viable "filled" seeds with embryos were shown to require an intraspecific cross. Primary hybrids between species produced >90% seeds with embryos that germinated well.• The type of SI operating within the genus was considered to be best explained by gametophytic self-incompatibility (GSI) with interspecific variation in its phenotypic expression. The implications of these findings are discussed in relation to SI in the Pleurothallidinae and conservation strategies for Restrepia and related genera. © 2015 Botanical Society of America, Inc.

  4. Range expansion of Oligoryzomys longicaudatus (Rodentia, Sigmodontinae in Patagonian Chile, and first record of Hantavirus in the region Ampliación del rango de distribución de Oligoryzomys longicaudatus (Rodentia, Sigmodontinae en la Patagonia de Chile y primer registro de Hantavirus en la región

    Directory of Open Access Journals (Sweden)

    SEBASTIÁN BELMAR-LUCERO

    2009-06-01

    Full Text Available At present, 20 species of Oligoryzomys (Rodentia, Sigmodontinae are recognized in the Neotropical region, most of them distinguished by their karyotypes, which fluctuates between 46-70 chromosomes. Two species are currently recognized in Chile, Oligoryzomys longicaudatus (Bennet, 1832; "colilargo" or the long-tailed pygmy rice rat; 2n = 56, which ranges from 27° to approximately 51° S, and O. magellanicus (Bennet, 1836; Magellanic pygmy rice rat; 2n = 54, south of 51° S in the Patagonian region of Chile and Argentina. As part of an ongoing research on the southern Patagonia of Chile, we report the results of small mammal samplings in six localities. We karyotyped 28 specimens and we also sequenced the hypervariable mtDNA region I in 22 individuals, aligning these sequences with an under development phylogeny of O. longicaudatus. We also evaluated the serology and viral charge in all captured specimens to detect the presence of antibodies to Andes virus (ANDV through Strip Immunoblot Assay (SIA, and of viral genome by RT-PCR. The results consistently showed that the karyotype of southern Patagonia specimens was 2n = 56, equal to that of O. longicaudatus, and that individuals from this area do not differentiate phylogenetically from those of the northern range of distribution. In addition, the serology showed the presence of antibodies IgG anti-ANDV and of viral genome in heart, kidney, spleen, and lungs of a single specimen of Oligoryzomys from the locality of Fuerte Bulnes in the Magallanes region. We conclude that all specimens trapped south of 51° S correspond to Oligoryzomys longicaudatus, thus expanding the distribution of this specie! from 51° to at least 55° S. The results also extended the disiribution of the Andes strain of Hantavirus to southernmost Patagonia.Actualmente se reconocen 20 especies de Oligoryzomys (Rodentia, Sigmodontinae en la región Neotropical, la mayoría de ellas distinguidas por sus cariotipos, los que fluct

  5. Taxonomy of the genus Arachis (Leguminosae

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    Antonio Krapovickas

    2007-01-01

    Full Text Available Almost 100 years elapsed between Linnaeus’ naming the then lone species ofArachis (A. hypogaea L. known to Europeans, and the first taxonomic treatment of the genus by Bentham in 1841. During the next 100 years five to ten additional species descriptions appeared, assigning different species to the same names, and different names to the same species. By mid-20th Century, it was impossible to examine any herbarium collection of Arachis and assign any epithet with any assurance to any specimen (which was not a type collection except to A. hypogaea, A. guaranitica, A. tuberosa and A. villosulicarpa. In our treatment, the literature of this botanical chaos in Arachis is reviewed in detail and an assessment is made of the foundations for its occurrence. It is shown that the bases for the confusion lay in the combination of the esoteric nature of the differentiating morphological features of Arachis, the fragmentary early collections, and the representation of species by seedling specimens. Also, it is related how, in 1959, we decided to re-explore the type locality of each species then known, collect therein complete plant specimens and thereby resolve the problem. Thirty-five years, two generations of plant collectors and around 2000 collections later, we present here 69 species descriptions of Arachis, species distributed in South America east of the Andes, south of the Amazon, north of La Plata and from NW Argentina to NE Brazil. We soon discovered that the most significant characters ofArachis lay in their underground structures, including their fruits, rhizomatous stems, root systems and hypocotyls. We showed that these defining characters tended to cluster the collections into groups which were associated with generally different geographic areas and ecological features. We drew a sample of 100 collections representing these clusters, areas and features, and arranged them in a hybridization diallel and showed, in crosses between

  6. Review of the genus Craspedolcus Enderlein sensu lato in China, with the description of a new genus and four new species (Hymenoptera, Braconidae, Braconinae)

    NARCIS (Netherlands)

    Li, Y.; Achterberg, van C.; Chen, X.-x.

    2017-01-01

    A new genus is split off the genus Craspedolcus Enderlein, 1920 (Hymenoptera, Braconidae, Braconinae): Maculibracon gen. n. with type species Maculibracon abruptus sp. n. The genus Craspedolcus Enderlein sensu stricto is redefined, a key to both genera and to their species in China, Thailand and

  7. Transfer of eleven species of the genus Burkholderia to the genus Paraburkholderia and proposal of Caballeronia gen. nov. to accommodate twelve species of the genera Burkholderia and Paraburkholderia.

    Science.gov (United States)

    Dobritsa, Anatoly P; Samadpour, Mansour

    2016-08-01

    It has been proposed to split the genus Burkholderia into two genera according to phylogenetic clustering: (1) a genus retaining this name and consisting mainly of animal and plant pathogens and (2) the genus Paraburkholderia including so-called environmental bacteria. The latter genus name has been validly published recently. During the period between the effective and valid publications of the genus name Paraburkholderia, 16 novel species of the genus Burkholderiawere described, but only two of them can be classified as members of this genus based on the emended genus description. Analysis of traits and phylogenetic positions of the other 11 species shows that they belong to the genus Paraburkholderia, and we propose to transfer them to this genus. The reclassified species names are proposed as Paraburkholderia dipogonis comb. nov., Paraburkholderia ginsengiterrae comb. nov., Paraburkholderia humisilvae comb. nov., Paraburkholderia insulsa comb. nov., Paraburkholderia kirstenboschensis comb. nov., Paraburkholderia metalliresistens comb. nov., Paraburkholderia monticola comb. nov., Paraburkholderia panaciterrae comb. nov., Paraburkholderia rhizosphaerae comb. nov., Paraburkholderia solisilvae comb. nov. and Paraburkholderia susongensis comb. nov. The remaining three species are transferred to the new genus Caballeronia gen. nov. proposed to accommodate twelve species of the genera Burkholderia and Paraburkholderia forming a distinctive clade in phylogenetic trees. The new genus members are Caballeronia choica comb. nov., Caballeronia cordobensis comb. nov., Caballeronia glathei comb. nov., Caballeronia grimmiae comb. nov., Caballeronia humi comb. nov., Caballeronia megalochromosomata comb. nov., Caballeronia jiangsuensis comb. nov., Caballeronia sordidicola comb. nov., Caballeronia telluris comb. nov., Caballeronia terrestris comb. nov., Caballeronia udeis comb. nov., and Caballeronia zhejiangensis comb. nov.

  8. Genus delineation of Chlamydiales by analysis of the percentage of conserved proteins justifies the reunifying of the genera Chlamydia and Chlamydophila into one single genus Chlamydia

    NARCIS (Netherlands)

    Pannekoek, Yvonne; Qi-Long, Qin; Zhang, Yu-Zhong; van der Ende, Arie

    2016-01-01

    Many studies have aimed to set up boundaries for the classification and definition of prokaryotic genus and species classification; however, studies that focused on genus-level genomic differences for existing taxonomy systems are limited. Recently, a novel method was described for prokaryotic genus

  9. GENUS RUELLIA: PHARMACOLOGICAL AND PHYTOCHEMICAL IMPORTANCE IN ETHNOPHARMACOLOGY.

    Science.gov (United States)

    Afzal, Khurram; Uzair, Muhammad; Chaudhary, Bashir Ahmad; Ahmad, Ashfaq; Afzal, Samina; Saadullah, Malik

    2015-01-01

    Ruellia is a genus of flowering plants commonly known as Ruellias or Wild Petunias which belongs to the family Acanthaceae. It contains about 250 genera and 2500 species. Most of these are shrubs, or twining vines; some are epiphytes. Only a few species are distributed in temperate regions. They are distributed in Indonesia and Malaysia, Africa, Brazil, Central America and Pakistan. Some of these are used as medicinal plants. Many species of the genus has antinociceptive, antioxidant, analgesic, antispasmolytic, antiulcer, antidiabetic and anti-inflammatory properties. The phytochemicals constituents: glycosides, alkaloids, flavonoids and triterpenoids are present. The genus has been traditionally claimed to be used for the treatment of flu, asthma, fever, bronchitis, high blood pressure, eczema, and diabetes. The objective of this review article is to summarize all the pharmacological and phytochemical evaluations or investigations to find area of gap and endorse this genus a step towards commercial drug. Hence, further work required is to isolate and characterize the active compounds responsible for these activities in this plant and bring this genus plants to commercial health market to serve community with their potential benefits.

  10. Bioactive constituents and medicinal importance of genus Alnus.

    Science.gov (United States)

    Sati, Sushil Chandra; Sati, Nitin; Sati, O P

    2011-07-01

    The genus Alnus has been reviewed for its chemical constituents and biological activities including traditional importance of some common species. The plants of this genus contain terpenoids, flavonoids, diarylheptanoids, phenols, steroids, and tannins. Diarylheptanoids are the dominant constituents within the genus Alnus, few of them exhibited antioxidant effects and inhibitory activity against nuclear factor kappaB activation, nitric oxide and tumor necrosis factor-α production, human umbilical vein endothelial cells, farnesyl protein transferase, cell-mediated low-density lipoprotein oxidation, HIF-1 in AGS cells, and the HIV-1-induced cytopathic effect in MT-4 cells. Some ellagitannines showed hepatoprotective activity even in a dose of 1 mg/kg which is ten-fold smaller compared with the dose of traditional flavonoid-based drugs. The members of genus Alnus are well known for their traditional uses in the treatment of various diseases like cancer, hepatitis, inflammation of uterus, uterine cancer, rheumatism, dysentery, stomachache, diarrhea, fever, etc. The aim of the present review is to summarize the various researches related to the chemistry and pharmacology of genus Alnus.

  11. Higher genus partition functions of meromorphic conformal field theories

    International Nuclear Information System (INIS)

    Gaberdiel, Matthias R.; Volpato, Roberto

    2009-01-01

    It is shown that the higher genus vacuum amplitudes of a meromorphic conformal field theory determine the affine symmetry of the theory uniquely, and we give arguments that suggest that also the representation content with respect to this affine symmetry is specified, up to automorphisms of the finite Lie algebra. We illustrate our findings with the self-dual theories at c = 16 and c = 24; in particular, we give an elementary argument that shows that the vacuum amplitudes of the E 8 x E 8 theory and the Spin(32)/Z 2 theory differ at genus g = 5. The fact that the discrepancy only arises at rather high genus is a consequence of the modular properties of higher genus amplitudes at small central charges. In fact, we show that for c ≤ 24 the genus one partition function specifies already the partition functions up to g ≤ 4 uniquely. Finally we explain how our results generalise to non-meromorphic conformal field theories.

  12. Genotyping of clinical isolates of Acanthamoeba genus in Venezuela.

    Science.gov (United States)

    Wagner, Carolina; Reyes-Batlle, María; Ysea, María Alejandra Vethencourt; Pérez, Mónica V Galindo; de Rondón, Carmen Guzmán; Paduani, Anaibeth J Nessi; Pérez, Angelyseb Dorta; López-Arencibia, Atteneri; Sifaoui, Ines; de Galindo, María Virginia Pérez; de Suárez, Eva Pérez; Martínez-Carretero, Enrique; Valladares, Basilio; Piñero, José E; Lorenzo-Morales, Jacob

    2016-12-01

    Free-living amoebae of Acanthamoeba genus are opportunistic pathogens distributed worldwide. Strains included in this genus are causative agents of a fatal encephalitis and a sight-threating keratitis in humans and other animals. In this study, 550 clinical samples which were collected between 1984 and 2014 from different patients with suspected infections due to Acanthamoeba were initially screened for the presence of this amoebic genus at the Laboratorio de Amibiasis-Escuela de Bioanálisis at the Universidad Central de Venezuela. Samples were cultured in 2% Non-Nutrient agar plates seeded with a layer of heat killed Escherichia coli. From the 550 clinical samples included in this study, 18 of them were positive for Acanthamoeba genus after culture identification. Moreover, positive samples were confirmed after amplification of the Diagnostic Fragment 3 (DF3) of the Acanthamoeba18S rDNA genus and sequencing was carried out in order to genotype the isolated strains of Acanthamoeba. Furthermore, the pathogenic potential of the strains was checked by performing thermotolerance and osmotolerance assays. Sequencing of the DF3 region resulted in the identification of genotype T4 in all the isolated strains. Moreover, most isolates were thermotolerant or both thermotolerant and osmotolerant and thus were classified as potentially pathogenic strains. To the best of our knowledge, this is the first report on the molecular characterization at the genotype level of Acanthamoeba strains in Venezuela.

  13. Guyanagarika, a new ectomycorrhizal genus of Agaricales from the Neotropics.

    Science.gov (United States)

    Sánchez-García, Marisol; Henkel, Terry W; Aime, Mary Catherine; Smith, Matthew E; Matheny, Patrick Brandon

    2016-12-01

    A new genus and three new species of Agaricales are described from the Pakaraima Mountains of Guyana in the central Guiana Shield. All three of these new species fruit on the ground in association with species of the ectomycorrhizal (ECM) tree genus Dicymbe (Fabaceae subfam. Caesalpinioideae) and one species has been shown to form ectomycorrhizas. Multi-locus molecular phylogenetic analyses place Guyanagarika gen. nov. within the Catathelasma clade, a lineage in the suborder Tricholomatineae of the Agaricales. We formally recognize this 'Catathelasma clade' as an expanded family Catathelasmataceae that includes the genera Callistosporium, Catathelasma, Guyanagarika, Macrocybe, Pleurocollybia, and Pseudolaccaria. Within the Catathelasmataceae, Catathelasma and Guyanagarika represent independent origins of the ectomycorrhizal habit. Guyanagarika is the first documented case of an ECM Agaricales genus known only from the Neotropics. Copyright © 2016 British Mycological Society. Published by Elsevier Ltd. All rights reserved.

  14. Genus-2 free energy of the closed bosonic string

    International Nuclear Information System (INIS)

    Leblanc, Y.

    1989-01-01

    Making use of the recently developed real-time finite-temperature formalism for string theory, we obtain an explicit expression for the Helmholtz free energy of a closed-bosonic-string gas in the genus-2 approximation. Our computation takes advantage of the modern Becchi-Rouet-Stora-Tyutin-invariant operator formalism for multiloop amplitudes and can be readily extended to arbitrary genus. We find some disagreement with previous results obtained through the imaginary-time (compactification) technique extended to higher-genus Riemann surfaces. Our comparison with the imaginary-time formalism is based on the McClain-Roth theorem. We mention a possible remedy to the latter technique in order to get correct results

  15. Higher genus correlators for the complex matrix model

    International Nuclear Information System (INIS)

    Ambjorn, J.; Kristhansen, C.F.; Makeenko, Y.M.

    1992-01-01

    In this paper, the authors describe an iterative scheme which allows us to calculate any multi-loop correlator for the complex matrix model to any genus using only the first in the chain of loop equations. The method works for a completely general potential and the results contain no explicit reference to the couplings. The genus g contribution to the m-loop correlator depends on a finite number of parameters, namely at most 4g - 2 + m. The authors find the generating functional explicitly up to genus three. The authors show as well that the model is equivalent to an external field problem for the complex matrix model with a logarithmic potential

  16. Genetic variability assessment in the genus Passiflora by SSR markers

    Directory of Open Access Journals (Sweden)

    Claudia Lougon Paiva

    2014-09-01

    Full Text Available The genus Passiflora encompasses many species that are endemic to the Brazilian territory, including some with economic value. Studies on genetic diversity in this genus are fundamental because they allow understanding genetic variability and distance. The present study aimed to determine the genetic variability and distances among 10 species of the genus Passiflora by using microsatellite markers (Simple Sequence Repeat, SSR. Twenty-eight heterologous microsatellite markers were tested, but only 12 were used in the diversity analysis because they amplified in at least 80% of the species. A clear separation was observed among the subgenuses studied, as well as wide variation among the accessions of Passiflora. This knowledge enables breeders to explore diversity and transfer favorable alleles found in wild species.

  17. Rapid identification of Zygosaccharomyces with genus-specific primers.

    Science.gov (United States)

    Hulin, Michelle; Wheals, Alan

    2014-03-03

    There has been a recent and rapid increase in the number of species of the genus Zygosaccharomyces which now comprises Z. bailii, Z. bisporus, Z. gambellarensis, Z. kombuchaensis, Z. lentus, Z. machadoi, Z. mellis, Z. parabaillii, Z. pseudobailii, Z. pseudorouxii, Z. rouxii, Z. sapae, and Z. siamensis. Z. pseudorouxii is an unofficial name given to isolates closely related to the newly-described species Z. sapae. The Zygosaccharomyces genus contains species that are important as food and beverage spoilage organisms and others are associated with fermentations and sweet foodstuffs, such as honey. Their economic significance means that the ability to identify them rapidly is of significant importance. Although Z. rouxii and Z. bailii have been genome-sequenced the extent of sequence data for the others, especially the newly-discovered species, is sometimes extremely limited which makes identification slow. However, parts of the ITS1/5.8S/ITS2 rDNA region contain sequences of sufficient similarity within the genus and of sufficient difference with outgroups, to be potential regions for the design of genus-wide specific primers. We report here the development of genus-specific primers that can detect all the major Zygosaccharomyces species including all those associated with foods; the rare and localised species Z. machadoi and Z. gambellarensis are not detected. The size of the single amplicon produced varies between species and in some cases is sufficiently different to assign provisional species identification. Sequence data from rDNA regions are available for virtually all described yeast species in all genera, thus, prior to having sufficient sequence data from structural genes, rDNA regions may provide more generally suitable candidates for both genus-specific and species-specific primer design. Copyright © 2013 Elsevier B.V. All rights reserved.

  18. Comparative Genomics Reveals High Genomic Diversity in the Genus Photobacterium.

    Science.gov (United States)

    Machado, Henrique; Gram, Lone

    2017-01-01

    Vibrionaceae is a large marine bacterial family, which can constitute up to 50% of the prokaryotic population in marine waters. Photobacterium is the second largest genus in the family and we used comparative genomics on 35 strains representing 16 of the 28 species described so far, to understand the genomic diversity present in the Photobacterium genus. Such understanding is important for ecophysiology studies of the genus. We used whole genome sequences to evaluate phylogenetic relationships using several analyses (16S rRNA, MLSA, fur , amino-acid usage, ANI), which allowed us to identify two misidentified strains. Genome analyses also revealed occurrence of higher and lower GC content clades, correlating with phylogenetic clusters. Pan- and core-genome analysis revealed the conservation of 25% of the genome throughout the genus, with a large and open pan-genome. The major source of genomic diversity could be traced to the smaller chromosome and plasmids. Several of the physiological traits studied in the genus did not correlate with phylogenetic data. Since horizontal gene transfer (HGT) is often suggested as a source of genetic diversity and a potential driver of genomic evolution in bacterial species, we looked into evidence of such in Photobacterium genomes. Genomic islands were the source of genomic differences between strains of the same species. Also, we found transposase genes and CRISPR arrays that suggest multiple encounters with foreign DNA. Presence of genomic exchange traits was widespread and abundant in the genus, suggesting a role in genomic evolution. The high genetic variability and indications of genetic exchange make it difficult to elucidate genome evolutionary paths and raise the awareness of the roles of foreign DNA in the genomic evolution of environmental organisms.

  19. Ethnomedicinal uses, phytochemistry and pharmacological properties of the genus Boerhavia.

    Science.gov (United States)

    Patil, Kapil S; Bhalsing, Sanjivani R

    2016-04-22

    The genus Boerhavia is widely distributed in tropical, subtropical and temperate regions of the world including Mexico, America, Africa, Asia, Indian Ocean Islands, Pacific Islands and Australia. The genus Boerhavia is extensively used by local peoples and medicinal practitioners for treatments of hepatitis, urinary disorders, gastro intestinal diseases, inflammations, skin problems, infectious diseases and asthma. Present review focused on traditional uses, phytochemistry, pharmacology and toxicology of Boerhavia genus to support potential scope for advance ethnopharmacological study. Information on the Boerhavia species was collected from classical books on medicinal plants, pharmacopoeias and scientific databases like PubMed, Scopus, GoogleScholar, Web of Science and others. Also scientific literatures based on ethnomedicinal surveys, Ph.D. and M.Sc. dissertations, published papers from Elsevier, Taylor and Francis, Springer, ACS as well as Wiley publishers and reports by government bodies and documentations were assessed. A total of 180 compounds from Boerhavia genus were isolated of which B. diffusa alone shared around 131 compounds and for most of which it is currently an exclusive source. In the genus, phenolic glycosides and flavonoids contribute approximately 97 compounds. These includes eupalitin, rotenoids like boeravinones, coccineons, alkaloid i.e. betanin and punarnavine etc., showing vital pharmaceutical activities such as anticancer, anti-inflammatory, antioxidant and immunomodulatory. Boerhavia is an important genus with wide range of medicinal uses. However, most of the available scientific literatures have lacked relevant doses, duration and positive controls for examining bioefficacy of extracts and its active compounds. In some studies, taxonomic errors were encountered. Moreover, there is need for accurate methods in testing the safety and ethnomedicinal validity of Boerhavia species. Copyright © 2016. Published by Elsevier Ireland Ltd.

  20. Revisiting the genus Photobacterium: taxonomy, ecology and pathogenesis.

    Science.gov (United States)

    Labella, Alejandro M; Arahal, David R; Castro, Dolores; Lemos, Manuel L; Borrego, Juan J

    2017-03-01

    The genus Photobacterium, one of the eight genera included in the family Vibrionaceae, contains 27 species with valid names and it has received attention because of the bioluminescence and pathogenesis mechanisms that some of its species exhibit. However, the taxonomy and phylogeny of this genus are not completely elucidated; for example, P. logei and P. fischeri are now considered members of the genus Aliivibrio, and previously were included in the genus Vibrio. In addition, P. damselae subsp. piscicida was formed as a new combination for former Vibrio damsela and Pasteurella piscicida. Moreover, P. damselae subsp. damselae is an earlier heterotypic synonym of P. histaminum. To avoid these incovenences draft and complete genomic sequences of members of Photobacterium are increasingly becoming available and their use is now routine for many research laboratories to address diverse goals: species delineation with overall genomic indexes, phylogenetic analyses, comparative genomics, and phenotypic inference. The habitats and isolation source of the Photobacterium species include seawater, sea sediments, saline lake waters, and a variety of marine organisms with which the photobacteria establish different relationships, from symbiosis to pathogenic interactions. Several species of this genus contain bioluminescent strains in symbiosis with marine fish and cephalopods; in addition, other species enhance its growth at pressures above 1 atmosphere, by means of several high-pressure adaptation mechanisms and for this, they may be considered as piezophilic (former barophilic) bacteria. Until now, only P. jeanii, P. rosenbergii, P. sanctipauli, and the two subspecies of P. damselae have been reported as responsible agents of several pathologies on animal hosts, such as corals, sponges, fish and homeothermic animals. In this review we have revised and updated the taxonomy, ecology and pathogenicity of several members of this genus. [Int Microbiol 20(1): 1-10 (2017

  1. Revision of the genus Endochilus Weise (Coleoptera: Coccinellidae: Chilocorini).

    Science.gov (United States)

    Łączyński, Piotr; Tomaszewska, Wioletta

    2014-05-20

    The members of the endemic African genus Endochilus Weise, 1898 (Coleoptera: Coccinellidae: Chilocorini) are redescribed, diagnosed, and illustrated. Lectotypes are designated for Endochilus compater Weise, Endochilus minor Weise, Endochilus plagiatus Sicard, Endochilus rubicundus Weise, and Endochilus styx Sicard. One new species is described: Endochilus abdominalis sp nov. Notes on the genus and nomenclatural history for each species are provided. A key for identification of all species is presented. Adult characters concerning similarities of Endochilus to other genera of African Chilocorini are discussed. This is an open access paper. We use the Creative Commons Attribution 3.0 license that permits unrestricted use, provided that the paper is properly attributed.

  2. Review of the genus Agria (Diptera, Sarcophagidae from China

    Directory of Open Access Journals (Sweden)

    Ming Zhang

    2013-06-01

    Full Text Available Agria mihalyii (Rohdendorf and Verves, 1978 is recorded from China for the first time, and both sexes are thoroughly documented using a combination of illustrations, photographs and scanning electron microscopy images. The generic affiliation is corroborated from an expanded definition of genus Agria Robineau-Desvoidy, 1830, and a key to males of the two known species from China is provided. The distribution of coeloconic sensilla on the male pre- and postgonite are shown to possess significant diagnostic and phylogenetic information in this genus.

  3. Revision of the genus Altitatiayus Weinreich(Coleoptera, Lucanidae, Lucaninae

    Directory of Open Access Journals (Sweden)

    Paschoal C. Grossi

    2010-01-01

    Full Text Available Revision of the genus Altitatiayus Weinreich (Coleoptera, Lucanidae, Lucaninae. The South American genus Altitatiayus Weinreich is revised and now includes six species, A. rotundatus (Boileau, A. ruficollis (Lüderwaldt, A. godinhorum (Bomans & Arnaud, A. dulceae (Bomans & Arnaud, A. trifurcatus (Grossi & Racca-Filho and A. koikei sp. nov. (Minas Gerais, Brazil. All species are described and illustrated. For the first time male and female genitalia are illustrated for five species and observations on the behavior of two species are included.

  4. Evolution of the leukotoxin operon in genus Mannheimia

    DEFF Research Database (Denmark)

    Larsen, J.; Pedersen, A. G.; Christensen, H.

    2005-01-01

    The leukotoxin protein of Mannheimia haemolytica belongs to the HlyA-like subfamily of cytotoxic RTX (repeats in toxin) proteins. To test the hypothesis that different lineages of genus Mannheimia gained the leukotoxin operon via horizontal gene transfer we used a strategy that combines compositi......The leukotoxin protein of Mannheimia haemolytica belongs to the HlyA-like subfamily of cytotoxic RTX (repeats in toxin) proteins. To test the hypothesis that different lineages of genus Mannheimia gained the leukotoxin operon via horizontal gene transfer we used a strategy that combines...

  5. Bioactive Natural Products of Marine Sponges from the Genus Hyrtios

    Directory of Open Access Journals (Sweden)

    Nourhan Hisham Shady

    2017-05-01

    Full Text Available Marine sponges are known as a rich source for novel bioactive compounds with valuable pharmacological potential. One of the most predominant sponge genera is Hyrtios, reported to have various species such as Hyrtios erectus, Hyrtios reticulatus, Hyrtios gumminae, Hyrtios communis, and Hyrtios tubulatus and a number of undescribed species. Members of the genus Hyrtios are a rich source of natural products with diverse and valuable biological activities, represented by different chemical classes including alkaloids, sesterterpenes and sesquiterpenes. This review covers the literature until June 2016, providing a complete survey of all compounds isolated from the genus Hyrtios with their corresponding biological activities whenever applicable.

  6. The genus cicerbita wallr. (cichorieae- asteraceae) in Pakistan and Kashmir

    International Nuclear Information System (INIS)

    Bano, R.; Qaiser, M.; Roohi, B.

    2010-01-01

    The genus Cicerbita Wallr. of the tribe Cichorieae-Asteraceae is revised for Pakistan and Kashmir. A broader generic concept of the genus is accepted and in all 11 species have been recognized including 3 new species viz. Cicerbita astorensis, Roohi Bano and Qaiser, C. alii, Roohi Bano and Qaiser and C. gilgitensis Roohi Bano and Qaiser. 5 new combinations, including 3 at species and 2 at varietal level have also been proposed. An artificial key to all the species is provided. Latin diagnosis, illustrations of newly described species, world wide and local distribution and ecological notes of all the species are also furnished. (author)

  7. Holographic partition functions and phases for higher genus Riemann surfaces

    International Nuclear Information System (INIS)

    Maxfield, Henry; Ross, Simon F; Way, Benson

    2016-01-01

    We describe a numerical method to compute the action of Euclidean saddle points for the partition function of a two-dimensional holographic CFT on a Riemann surface of arbitrary genus, with constant curvature metric. We explicitly evaluate the action for the saddles for genus two and map out the phase structure of dominant bulk saddles in a two-dimensional subspace of the moduli space. We discuss spontaneous breaking of discrete symmetries, and show that the handlebody bulk saddles always dominate over certain non-handlebody solutions. (paper)

  8. Large N elliptic genus and AdS/CFT Correspondence

    International Nuclear Information System (INIS)

    Boer, Jan de

    1998-01-01

    According to one of Maldacena's dualities, type IIB string theory on AdS 3 x S 3 x K3 is equivalent to a certain N = (4, 4) superconformal field theory. In this note we compute the elliptic genus of the boundary theory in the supergravity approximation. A finite quantity is obtained once we introduce a particular exclusion principle. In the regime where the supergravity approximation is reliable, we find exact agreement with the elliptic genus of a sigma model with target space K3 N /S N

  9. The genus Boschniakia in China: An ethnopharmacological and phytochemical review.

    Science.gov (United States)

    Zhang, Le; Zhao, Yunshan; Wang, Zhipeng A; Wei, Kunhua; Qiu, Bin; Zhang, Chunhong; Wang-Müller, QiYan; Li, Minhui

    2016-12-24

    As a group of important medicine plants, Boschniakia rossica (Cham. et Schltdl) Fedtsch. and B. himalaica Hook.f.et Thoms, which are the only two species in the genus Boschniakia (Orobanchaceae), have long been used in traditional Chinese medicine for their multiple therapeutic uses related to enhanced renal function, erectile dysfunction, defaecate and hepatoprotective. Additionally, the two species are also used as dietary supplements in wine, cosmetics, and other healthy food. By providing comprehensive information and data of genus Boschniakia on botany, traditional medicinal uses, phytochemistry, pharmacological research and toxicology, this review aims to summary the group of natural compounds from Boschniakia discovered so far. The other aims are to reference research findings of their biological activities and functions in medicine, physiology, and cell biology to highlight the compound candidates which can be used for further drug discovery in several pharmaceutical areas including antioxidation, anticancer, anti-inflammation, anti-senile, and immunology. All of the available information on B. rossica and B. himalaica was collected from the electronic resources (such as PubMed, SciFinder Scholar, CNKI, TPL (www.theplantlist.org), Google Scholar, Baidu Scholar, and Web of Science). After a comprehensive analysis of the literatures from available online sources, the results show that both species of genus Boschniakia are valuable and popular herbal medicines with potentials to cure various ailments. The phytochemical studies revealed that the chemical compositions of this genus were mainly iridoid glycosides and phenylpropanoid glycosides. To date, 112 compounds have been isolated from the genus, while their crude extracts and purified compounds have been found to possess a wide range of biological activities including anti-senile, antitumor and anticancer, anti-inflammatory, protecting liver, boost memory, anti-oxidation, anti-lipid peroxidative, and

  10. Anthoporia, a new genus in the Polyporales (Agaricomycetes

    Directory of Open Access Journals (Sweden)

    Karasiński Dariusz

    2016-07-01

    Full Text Available A new genus, Anthoporia Karasiński & Niemelä, is proposed for the brown-rot polypore Polyporus albobrunneus Romell [= Antrodia albobrunnea (Romell Ryvarden]. The new genus is separated from Antrodia P. Karst. s.str. in several morphological features, and it is only distantly related to Antrodia serpens (Fr. P. Karst. (generic type of Antrodia in recently published phylogenies. Additionally, Anthoporia albobrunnea (Romell Karasiński & Niemelä is described and illustrated based on material collected in Białowieża National Park in northeastern Poland.

  11. Identification of mip-like genes in the genus Legionella

    DEFF Research Database (Denmark)

    Cianciotto, N P; Bangsborg, Jette Marie; Eisenstein, B I

    1990-01-01

    in the genus Legionella, a large panel of Legionella strains was examined by Southern hybridization and immunoblot analyses for the presence and expression of mip-related sequences. Strains representing all 14 serogroups of L. pneumophila contained a mip gene and expressed a 24-kilodalton Mip protein. Although...... with specific Mip antisera. Moreover, the cloned mip analog from Legionella micdadei encoded the cross-reactive protein. Thus, mip is conserved and specific to L. pneumophila, but mip-like genes are present throughout the genus, perhaps potentiating the intracellular infectivity of all Legionella species....

  12. N=2 gauged WZW models and the elliptic genus

    International Nuclear Information System (INIS)

    Henningson, M.

    1994-01-01

    Witten recently gave further evidence for the conjectured relationship between the A-series of the N = 2 minimal models and certain Landau-Ginzburg models by computing the elliptic genus for the latter. The results agree with those of the N = 2 minimal models, as can be calculated from the known characters of the discrete series representations of the N = 2 superconformal algebra. The N = 2 minimal models also have a lagrangian representation as supersymmetric gauged WZW models. We calculate the elliptic genera, interpreted as a genus one path integral with twisted boundary conditions, for such models and recover the previously known result. (orig.)

  13. Genus Phyllanthus for chronic hepatitis B virus infection

    DEFF Research Database (Denmark)

    Liu, J; Lin, Haili; McIntosh, H

    2001-01-01

    To evaluate the efficacy and safety of genus Phyllanthus for chronic hepatitis B virus (HBV) infection we performed a systematic review of randomized clinical trials. Randomized trials comparing genus Phyllanthus vs. placebo, no intervention, general nonspecific treatment, other herbal medicine.......85-17.21) compared with placebo or no intervention. There was no significant difference on clearance of serum HBsAg, HBeAg and HBV DNA between Phyllanthus and IFN. Phyllanthus species were better than nonspecific treatment or other herbal medicines for the clearance of serum HBsAg, HBeAg, HBV DNA, and liver enzyme...

  14. Nitrite Contents in Fresh Vegetables of Different Families and Genus

    Science.gov (United States)

    Cui, Yuqian; Li, Xiao; Xu, Lingyi; Pang, Meixia; Qi, Jinghua; Wang, Fang

    2017-12-01

    The aim of this study is firstly aimed at investigating the contents of nitrite in common consumed vegetables according to families and genus classification. The vegetables were randomly collected and analyzed in quartile sampling according to GB5009.30-2016. The vegetables were analyzed by the software of Spss20.0 and statistically significant Duncan multiple comparisons. The data indicates that the nitrite contents in different families and different genus vegetables in same family were significant (Pcorn kernels (0.7119mg/kg dry weight), Lotus root (0.592mg/kg dry weight).

  15. Advances in Chemistry and Bioactivity of the Genus Chisocheton Blume.

    Science.gov (United States)

    Shilpi, Jamil A; Saha, Sanjib; Chong, Soon-Lim; Nahar, Lutfun; Sarker, Satyajit D; Awang, Khalijah

    2016-05-01

    Chisocheton is one of the genera of the family Meliaceae and consists of ca. 53 species; the distribution of most of those are confined to the Indo-Malay region. Species of broader geographic distribution have undergone extensive phytochemical investigations. Previous phytochemical investigations of this genus resulted in the isolation of mainly limonoids, apotirucallane, tirucallane, and dammarane triterpenes. Reported bioactivities of the isolated compounds include cytotoxic, anti-inflammatory, antifungal, antimalarial, antimycobacterial, antifeedant, and lipid droplet inhibitory activities. Aside from chemistry and biological activities, this review also deals briefly with botany, distribution, and uses of various species of this genus. © 2016 Verlag Helvetica Chimica Acta AG, Zürich.

  16. Evolution of the Leukotoxin Operon in Genus Mannheimia

    DEFF Research Database (Denmark)

    Larsen, Jesper; Pedersen, Anders Gorm; Christensen, Henrik

    The leukotoxin protein of Mannheimia haemolytica belongs to the HlyA-like subfamily of cytotoxic RTX (repeats in toxin) proteins. To test the hypothesis that different lineages of genus Mannheimia gained the leukotoxin operon via horizontal gene transfer we used a strategy that combines compositi......The leukotoxin protein of Mannheimia haemolytica belongs to the HlyA-like subfamily of cytotoxic RTX (repeats in toxin) proteins. To test the hypothesis that different lineages of genus Mannheimia gained the leukotoxin operon via horizontal gene transfer we used a strategy that combines...

  17. Fricke Lie algebras and the genus zero property in Moonshine

    Science.gov (United States)

    Carnahan, Scott

    2017-10-01

    We give a new, simpler proof that the canonical actions of finite groups on Fricke-type Monstrous Lie algebras yield genus zero functions in generalized Monstrous Moonshine, using a Borcherds-Kac-Moody Lie algebra decomposition due to Jurisich. We describe a compatibility condition, arising from the no-ghost theorem in bosonic string theory, that yields the genus zero property. We give evidence for and against the conjecture that such a compatibility for symmetries of the Monster Lie algebra gives a characterization of the Monster group.

  18. On the identity of two new species of the genus coleoscirus (acari: cunaxidae) with annotations on the genus from pakistan

    International Nuclear Information System (INIS)

    Bashir, M.H.; Ashfaq, M.

    2008-01-01

    Adult females of two new Cunaxid mites, Coleoscirus raviensis n.sp. and Coleoscirus tobaensis n.sp. were collected during the taxonomic exploration of the mite fauna of the family Cunaxidae from Punjab- Pakistan. The new species were compared with 9 already describes species of the same genus from Pakistan. A Comprehensive key of all the known species of this genus from Pakistan has been prepared to incorporate the new species. A ceremonial description and illustration of main body characteristics, geographical distribution, host range and distinguishing remarks are also given. (author)

  19. The Lesser Antillean scorpions of the genus Centruroides

    NARCIS (Netherlands)

    Armas, de Luis F.

    1983-01-01

    The buthid scorpions of the genus Centruroides are widely distributed in the Antillean area. They are also the most common scorpions in the majority of these islands. Nevertheless they remained almost forgotten until recently (STAHNKE 1970; ARMAS 1976, 1977, 1980, 1981, 1982; FRANCKE & SISSOM 1980).

  20. Screening genus Penicillium for producers of cellulolytic and xylanolytic enzymes

    DEFF Research Database (Denmark)

    Krogh, Kristian Bertel Rømer; Mørkeberg, Astrid; Frisvad, Jens Christian

    2004-01-01

    genus Penicillium and compared with that of T. reesei. Either Solka-Floc cellulose or oat spelt xylan was used as carbon source in shake flask cultivations. All the fungi investigated showed coinduction of cellulolytic and xylanolytic enzymes during growth on cellulose as well as on xylan. The highest...... filter paper activity was measured after cultivation of Penicillium brasilianum IBT 20888 on cellulose....

  1. Species and genetic diversity in the genus Drosophila inhabiting the ...

    Indian Academy of Sciences (India)

    Genus Drosophila belongs to the family Drosophilidae (class Insecta, order Diptera), characterized by rich species diversity at global level and also in India, which is a megadiverse country. At global level, more than 1500 species have been described and several thousands estimated. Hawaiian Islands are particularly rich ...

  2. Contribution to the genus Xanthocorus Miyatake (Coleoptera, Coccinellidae, Chilocorini

    Directory of Open Access Journals (Sweden)

    Wenjing Li

    2015-07-01

    Full Text Available The genus Xanthocorus Miyatake, 1970 consists of three species from China, including two new species described here: X. nigrosuturalis sp. n. and X. mucronatus sp. n. A key to identification of species is given. Diagnoses, detailed descriptions, illustrations, and distributions are provided.

  3. Biological advances in Bergenia genus plant | Zhang | African ...

    African Journals Online (AJOL)

    Bergenia, a genus belonging to Saxifragaceae family, is one of the most important medicinal plants, has high application values for human. Currently, wild Bergenia is becoming lacking, due to destruction of ecological environment and excessive excavation; furthermore, the study on it is not deep enough, many related ...

  4. A molecular phylogeny of selected species of Genus Prunus L ...

    African Journals Online (AJOL)

    Administrator

    2011-05-30

    May 30, 2011 ... The genus Prunus L. is an important plant for fruit production and it includes plums, apricots, cherries, almonds and peaches that are sources of food for the local people. The family Rosaceae is not yet published in Flora of Pakistan and there is a lot of taxonomic work that is yet to be done for the proper.

  5. The genus Calvatia ('Gasteromycetes', Lycoperdaceae): A review of ...

    African Journals Online (AJOL)

    Several members of the fungal puffball genus Calvatia Fr. have found widespread use amongst various cultures world-wide, especially as sources of food and/or traditional medicine. Hitherto the biotechnological potential of only a handful of Calvatia species, namely C. cyathiformis, C. craniiformis, C. excipuliformis, C.

  6. The genus Xiphinema in southern Africa. XI. Description of ...

    African Journals Online (AJOL)

    The genus Xiphinema in southern Africa. XI. Description of Xiphinema stockeri n. sp. from. Botswana (Nematoda: Dorylaimida). J.C. de W. Kruger and J. Heyns. Department of Zoology, Rand Afrikaans University, Johannesburg. Xiphinema stockeri n. sp. is described from Botswana The new species is characterized by an ...

  7. Phylogenetic and genomic relationships in the genus Malus based ...

    African Journals Online (AJOL)

    STORAGESEVER

    2009-08-04

    Aug 4, 2009 ... Phylogenetic and genomic relationships in the genus. Malus based on RAPDs. Ogunkanmi Liasu Adebayo2*, Oboh Bola2, Williams Opeyemi2, Monu Gloria2 and Ogundipe. Olowatoyin Temitope1. 1Botany and Microbiology Department, University of Lagos, Nigeria. 2Cell Biology and Genetics Department ...

  8. A new southern African genus in the holothurian family ...

    African Journals Online (AJOL)

    A new genus Roweia in the holothurian family Cucumariidae is erected to accommodate two southern African dendrochi-rotids, Cucumaria frauenfeldi Ludwig and C. stephensoni John which have previously always been classified in Cucumaria (si). Some intraspecific variations in R. frauenfeldi are discussed and, on this ...

  9. North-West Indian fauna of genus Macrobathra Meyrick ...

    African Journals Online (AJOL)

    Two first representative species of genus Macrobathra Meyrick viz., gentilis Meyrick and ochrefasciata sp. nov. are reported from three inadequately surveyed North-West Indian states, namely Haryana, Himachal Pradesh and Rajasthan. With the addition of another new species, total number of species under the ...

  10. A molecular phylogeny of selected species of Genus Prunus L ...

    African Journals Online (AJOL)

    A molecular phylogeny of selected species of Genus Prunus L. (Rosaceae) from Pakistan using the TRN-L & TRN-F spacer DNA. ... D.A. Webb. (Syn. Prunus amygdalus) and Prunus cornuta (Wall. ex. Royle) Steudel. which are indigenous to Pakistan. Key Words: Prunus, chloroplast, TRN-L, TRN-F, Pakistan.

  11. The genus Typhonium (Araceae-Areae) in Australasia

    NARCIS (Netherlands)

    Hay, A.

    1993-01-01

    The genus Typhonium (Araceae-Areae) is revised for Australasia. Fourteen species are recognised. Two are introduced. Of the twelve indigenous, eleven are endemic to the region. Six aré new to science. Typhonium millarii F.M. Bailey is reduced to synonymy with T. angustilobum F. Muell. Illustrations

  12. South American freshwater needlefishes (Belonidae) of the genus Pseudotylosurus

    NARCIS (Netherlands)

    Collete, B.B.

    1974-01-01

    Pseudotylosurus Fernández Yépez is considered a valid genus of Belonidae based on the following combination of characters: depressed caudal peduncle; long narrow side branches to lateral line; pleural ribs attached to fourth vertebra; nasal papilla spatulate; lower pharyngeal plate and upper

  13. Juvenile colonies of the genus Pyrostremma Garstang, 1929 (Tunicata, Thaliacea)

    NARCIS (Netherlands)

    Soest, van R.W.M.

    1974-01-01

    Four remarkable dome-shaped, apparently juvenile colonies, belonging to the genus Pyrostremma Garstang, 1929, are described from the Bermuda area. Comparison with juvenile colonies of P.agassizi (Ritter & Byxbee, 1905), and with larger colonies, fragments and loose zooids of P.agassizi and

  14. New chromosome numbers in the genus Trigonella L. (Fabaceae ...

    African Journals Online (AJOL)

    Jane

    10 Jan 2011 ... b: Subgenus Trifoliastrum: Calyx campanulate and pod inflated. c: Subgenus Foenum-graecum: Calyx tubular and pod not inflated. Several investigators have attempted to employ the taxonomy of the genus Trigonella; Sirjaev (1935) has given in Latin an elaborate and systematic account of its taxonomy.

  15. Distribution, diversity and conservation of the genus Aloe in Kenya ...

    African Journals Online (AJOL)

    The genus Aloe is common in Kenya, with about 60 taxa recognised. Observations from this study indicate that most of the taxa have a restricted distribution, with only Aloe secundiflora var. secundiflora being widespread in the country. The diversity patterns indicate a high concentration of taxa in three areas that are ...

  16. Polystomatidae (Monogenea) parasitic in the anuran genus Kassina ...

    African Journals Online (AJOL)

    An investigation into the parasite loads of several anuran species in the central and eastern parts of the Orange Free State led to the discovery of another new South African species of Polystoma, harboured in running frogs of the genus Kassina which has not previously been known as a host of adult polystomes. Detailed ...

  17. Biosystematics of the Malagasy frogs. II. The genus Boophis (Rhacophoridae)

    NARCIS (Netherlands)

    Blommers-Schlösser, R.M.A.

    1979-01-01

    This paper concerns the genus Boophis Tschudi, 1938 ( = Malagasy Rhacophorus Kuhl & Van Hasselt, 1822). Apart from a reconsidering of adult morphology, certain new taxonomic characters, such as the colouration in life, the morphology of the tadpole and some mating calls, are presented. Karyotypes

  18. Recursions for characteristic numbers of genus one plane curves

    OpenAIRE

    Vakil, Ravi

    2001-01-01

    Characteristic numbers of families of maps of nodal curves to P2 are defined as intersection of natural divisor classes. (This definition agrees with the usual definition for families of plane curves.) Simple recursions for characteristic numbers of genus one plane curves of all degrees are computed.

  19. Bioactive Secondary Metabolites from the Marine Sponge Genus Agelas

    OpenAIRE

    Zhang, Huawei; Dong, Menglian; Chen, Jianwei; Wang, Hong; Tenney, Karen; Crews, Phillip

    2017-01-01

    The marine sponge genus Agelas comprises a rich reservoir of species and natural products with diverse chemical structures and biological properties with potential application in new drug development. This review for the first time summarized secondary metabolites from Agelas sponges discovered in the past 47 years together with their bioactive effects.

  20. Systematics and evolution in the West Indian iguanid genus Cyclura

    NARCIS (Netherlands)

    Schwartz, Albert; Carey, Michael

    1977-01-01

    Throughout the Greater Antilles, the Virgin Islands, the Cayman Islands, the Bahama Islands, and the Turks and Caicos islands occurs a group of moderate to very large lizards of the iguanid genus Cyclura. These ground iguanas form a conspicuous element of the herpetofaunas of their respective

  1. Polystomatidae (Monogenea) parasitic in the anuran genus Kassina ...

    African Journals Online (AJOL)

    Combes & Channing (1978-79) expressed the opinion that the discontinuity between the range of Polystoma natalensis, described by them from Natal in South Africa, and those of other African species of the genus, was probably due to a lack of documentation. An investigation into the parasite loads of several anuran ...

  2. Revision of the Genus Hybosorus Macleay (Coleoptera: Scarabaeidae, Hybosorinae)

    NARCIS (Netherlands)

    Kuijten, P.J.

    1983-01-01

    A taxonomic revision of the scarabaeoid genus Hybosorus is given, including descriptions, nomenclatorial notes, figures of genital apparatus and other relevant parts, a key, and notes on distribution and bionomics. Lectotypes are designated for Hybosorus carolinus LeConte, H. crassus Klug, H.

  3. A revision of the genus Sinularia May (Octocorallia, Alcyonacea)

    NARCIS (Netherlands)

    Verseveldt, J.

    1980-01-01

    In this revision of the genus Sinularia 93 valid species are recorded. The type specimens of 13 species could not be examined, since the depository of the specimens is unknown; nevertheless it is possible to make notes on seven of them in this paper; three were discussed in former papers (S. gyrosa,

  4. Phylogenetic diversity and position of the genus Campylobacter

    Science.gov (United States)

    Lau, P. P.; DeBrunner-Vossbrinck, B.; Dunn, B.; Miotto, K.; MacDonnell, M. T.; Rollins, D. M.; Pillidge, C. J.; Hespell, R. B.; Colwell, R. R.; Sogin, M. L.; hide

    1987-01-01

    RNA sequence analysis has been used to examine the phylogenetic position and structure of the genus Campylobacter. A complete 5S rRNA sequence was determined for two strains of Campylobacter jejuni and extensive partial sequences of the 16S rRNA were obtained for several strains of C. jejuni and Wolinella succinogenes. In addition limited partial sequence data were obtained from the 16S rRNAs of isolates of C. coli, C. laridis, C. fetus, C. fecalis, and C. pyloridis. It was found that W. succinogenes is specifically related to, but not included, in the genus Campylobacter as presently constituted. Within the genus significant diversity was noted. C. jejuni, C. coli and C. laridis are very closely related but the other species are distinctly different from one another. C. pyloridis is without question the most divergent of the Campylobacter isolates examined here and is sufficiently distinct to warrant inclusion in a separate genus. In terms of overall position in bacterial phylogeny, the Campylobacter/Wolinella cluster represents a deep branching most probably located within an expanded version of the Division containing the purple photosynthetic bacteria and their relatives. The Campylobacter/Wolinella cluster is not specifically includable in either the alpha, beta or gamma subdivisions of the purple bacteria.

  5. Reality conditions of loop solitons genus $g$: hyperelliptic am functions

    Directory of Open Access Journals (Sweden)

    Shigeki Matsutani

    2007-06-01

    Full Text Available This article is devoted to an investigation of a reality condition of a hyperelliptic loop soliton of higher genus. In the investigation, we have a natural extension of Jacobi am-function for an elliptic curves to that for a hyperelliptic curve. We also compute winding numbers of loop solitons.

  6. Ortholog prediction of the Aspergillus genus applicable for synthetic biology

    DEFF Research Database (Denmark)

    Rasmussen, Jane Lind Nybo; Vesth, Tammi Camilla; Theobald, Sebastian

    production. In this project, we compare the genomes of +300 species from the Aspergillus genus to generate a high-resolution pan-genomic map, representing genetic diversity spanning ~200 million years. We are identifying genes specific to species and clades to allow for guilt-by-association-based mapping...

  7. Phytochemical and Ethno-Pharmacological Review of the Genus ...

    African Journals Online (AJOL)

    Biflavanoid, diterpene, phenyl propanoid and lignans are abundant in the genus. The most common pharmacological activity of Araucaria in modern medicines is anti-inflammatory. It also possesses other pharmacological activities such as antiulcer, antiviral, neuro-protective, anti-depressant and anti-coagulant. The aim of ...

  8. New genus of diminutive microhylid frogs from Papua New Guinea

    Directory of Open Access Journals (Sweden)

    Fred Kraus

    2010-06-01

    Full Text Available A new genus of diminutive (10.1-11.3 mm microhylid frogs is described from New Guinea that is unique in its combination ofonly seven presacral vertebrae, a reduced phalangeal formula that leaves the first fingers and first toes as vestigial nubs, and reduction of the prepollex and prehallux to single elements. Relationships to other genera are unknown, but overall similarity suggests some relationship to Cophixalus, although that genus also differs in some muscle characters and likely remains paraphyletic. The new genus contains two species, which are among the smallest known frogs in the world. Their miniaturization may be related to their inhabiting leaf litter, exploitation of which may for small size. The new genus is currently known only from one mountaintop in the southeasternmost portion of New Guinea and another on a nearby island. This region is part of the East Papuan Composite Terrane and, should this lineage prove endemic to that region, it may suggest that it originated prior to that geological unit’s docking with mainland New Guinea at 23–29 MY.

  9. INTRODUCTION The tailor or weaver ants of genus Oecophylla ...

    African Journals Online (AJOL)

    INTRODUCTION. The tailor or weaver ants of genus Oecophylla. (Hymenoptera: Formicidae) are eusocial insects. They are obligately arboreal and are known for their unique nest building behaviour where workers construct nests by weaving together leaves using larval silk. Colonies can be extremely large with a mature ...

  10. Sirdavidia, an extraordinary new genus of Annonaceae from Gabon.

    Science.gov (United States)

    Couvreur, Thomas L P; Niangadouma, Raoul; Sonké, Bonaventure; Sauquet, Hervé

    2015-01-01

    A distinctive new monotypic genus from Gabon is described in the tropical plant family Annonaceae: Sirdavidia, in honor to Sir David Attenborough. Molecular phylogenetic analyses confirm that Sirdavidia, which is very distinct from a morphological standpoint, is not nested in any existing genus of Annonaceae and belongs to tribe Piptostigmateae (subfamily Malmeoideae), which now contains a total of six genera. The genus is characterized by long acuminate leaves, fully reflexed red petals, 16-19 bright yellow, loosely arranged stamens forming a cone, and a single carpel topped by a conspicuous stigma. With just three known collections, a preliminary IUCN conservation status assessment is provided as "endangered" as well as a distribution map. The discovery of Sirdavidia is remarkable at several levels. First, it was collected near the road in one of the botanically best-known regions of Gabon: Monts de Cristal National Park. Second, its sister group is the genus Mwasumbia, also monotypic, endemic to a small area in a forest in Tanzania, some 3000 km away. Finally, the floral morphology is highly suggestive of a buzz pollination syndrome. If confirmed, this would be the first documentation of such a pollination syndrome in Magnoliidae and early-diverging angiosperms in general.

  11. The genus Sphacelaria Lyngbye (Phaeophyceae) in the Netherlands

    NARCIS (Netherlands)

    Haas-Niekerk, de T.

    1966-01-01

    The species of the genus Sphacelaria Lyngb. that occur in the Netherlands have been investigated. These species are: S. plumigera Holmes, S. radicans (Dillw.) Ag., S. fusca (Huds.) Ag. It is suggested that S. furcigera and S. saxatilis should be regarded as synonyms of S. fusca. It was found that S.

  12. Identification of mip-like genes in the genus Legionella

    DEFF Research Database (Denmark)

    Cianciotto, N P; Bangsborg, Jette Marie; Eisenstein, B I

    1990-01-01

    with specific Mip antisera. Moreover, the cloned mip analog from Legionella micdadei encoded the cross-reactive protein. Thus, mip is conserved and specific to L. pneumophila, but mip-like genes are present throughout the genus, perhaps potentiating the intracellular infectivity of all Legionella species....

  13. The genus Capparis (Capparaceae) from the Indus to the Pacific

    NARCIS (Netherlands)

    Jacobs, M.

    1964-01-01

    This is a taxonomic revision of the genus Capparis in South and Southeast Asia, Malesia, Australia, and the Pacific. In this area, four sections are distinguished: 1. sect. Capparis, monotypic with C. spinosa, 2. sect. Sodada, monotypic with C. decidua, 3. sect. Monostichocalyx in a new

  14. Phylogenetic analysis of the genus Hordeum using repetitive DNA sequences

    DEFF Research Database (Denmark)

    Svitashev, S.; Bryngelsson, T.; Vershinin, A.

    1994-01-01

    A set of six cloned barley (Hordeum vulgare) repetitive DNA sequences was used for the analysis of phylogenetic relationships among 31 species (46 taxa) of the genus Hordeum, using molecular hybridization techniques. In situ hybridization experiments showed dispersed organization of the sequences...

  15. Formulae for Arithmetic on Genus 2 Hyperelliptic Curves

    DEFF Research Database (Denmark)

    Lange, Tanja

    2005-01-01

    treat odd and even characteristic separately. We present 3 different coordinate systems which are suitable for different environments, e.g. on a smart card we should avoid inversions while in software a limited number is acceptable. The presented formulae render genus two hyperelliptic curves very...

  16. Substrates specialization in lipid compounds and hydrocarbons of Marinobacter genus

    NARCIS (Netherlands)

    Bonin, P.; Vieira, C.; Grimaud, R.; Militon, C.; Cuny, P.; Lima, O.; Guasco, S.; Brussaard, C.P.D.; Michotey, V.

    2015-01-01

    The impact of petroleum contamination and of burrowing macrofauna on abundances of Marinobacter and denitrifiers was tested in marine sediment mesocoms after 3 months incubation. Quantification of this genus by qPCR with a new primer set showed that the main factor favoring Marinobacter abundance

  17. The oribatid mite genus Benoibates (Acari, Oribatida, Oripodidae).

    Science.gov (United States)

    Ermilov, Sergey G; Alvarado-Rodríguez, Olman; Kontschán, Jenő; Retana-Salazar, Axel P

    2014-01-01

    Two species of oribatid mites of the genus Benoibates (Oribatida, Oripodidae), i.e., Benoibatesbolivianus Balogh & Mahunka, 1969(a) and Benoibatesminimus Mahunka, 1985, are recorded for the first time in Costa Rica. Both are redescribed in details, using drawings, images and SEM micrographs, on the basis of Costa Rican specimens. An identification key to the known species of Benoibates is given.

  18. Pollen Ultrastructure of Genus Dendrobium Orchids as a Learning Resource

    Directory of Open Access Journals (Sweden)

    Lika Dwi Apriani

    2016-11-01

    Full Text Available Anggrek genus Dendrobium merupakan salah satu genus dari divisi spermatophyta yang merupakan kelompok tumbuhan yang berkembang dengan menggunakan biji. Tumbuhan berbiji tentu memiliki bunga sebagai alat perkembangan generatifnya. Perkembangan generatif pada bunga artinya pertemuan antara sel gamet jantan dan sel gamet betina. Sel gamet betina pada tumbuhan dihasilkan oleh putik, sedangkan sel gamet jantan disebut serbuk sari atau pollen. Genus Dendrobium merupakan salah satu kekayaan alam Indonesia, jumlahnya diperkirakan mencapai 275 spesies. Penelitian ini bertujuan untuk mengetahui bagaimana ultrastruktur pollen anggrek genus Dendrobium dari sepuluh spesies yang diamati menggunakan SEM. Jenis penelitian ini adalah deskriptif kualitatif. Hasil penelitian menunjukkan unit pollen untuk semua spesies yaitu kategori pollinia, sedangkan untuk polaritas pollen adalah apolar. Jenis aperture kesepuluh spesies yang diamati mempunyai aperture dengan pola yang tidak beraturan dan lebih dari enam yang disebut colpate. Bentuk pollen dari semua spesies yang diteliti bentuknya adalah subprolate hingga prolate dan ukuran pollen termasuk dalam kategori minuta hingga media. Ornamentasi pollen atau skluptur pollen tidak teridentifikasi dikarenakan ukuran pollen yang terlalu kecil, permukaan pollen terlihat kurang jelas. Sumber belajar yang digunakan adalah atlas.

  19. Gondwanamyia, a new empidoid (Diptera genus of uncertain placement

    Directory of Open Access Journals (Sweden)

    Bradley J. Sinclair

    2016-10-01

    Full Text Available A new minute-size empidoid fly genus, Gondwanamyia gen. n. and two new species (G. chilensis Cumming & Saigusa, sp. n., G. zealandica Sinclair & Brooks, sp. n. are described, illustrated, and their distributions mapped. The family and subfamily assignments remain uncertain, but features of the female terminalia potentially suggest Trichopezinae (Brachystomatidae.

  20. Twists of genus three curves and their Jacobians

    NARCIS (Netherlands)

    Meagher, Stephen

    2008-01-01

    An algebraic curve is a curve defined over by polynomial equations with coefficients in a given field. This thesis treats problems which arise from genus three curves over finite fields. An important tool for treating such curves is the Jacobian variety of the curve. One problem is how many points

  1. Controlling bean pod mottle virus (BPMV) (Genus Comovirus of ...

    African Journals Online (AJOL)

    Controlling bean pod mottle virus (BPMV) (Genus Comovirus of soybean with spatial arrangement of maize-soybean in southeastern Nigeria. ... plant produced the lowest grain yield.of 0..82 t / ha. Keywords: Spatial arrangement, Bean leaf beetle, Bean pod Mottl virus, Maize, Soybean. Agro-Science Vol. 3 (2) 2006: pp.

  2. A genus six cyclic tetragonal reduction of the Benney equations

    International Nuclear Information System (INIS)

    England, M; Gibbons, J

    2009-01-01

    A reduction of Benney's equations is constructed corresponding to Schwartz-Christoffel maps associated with a family of genus six cyclic tetragonal curves. The mapping function, a second kind Abelian integral on the associated Riemann surface, is constructed explicitly as a rational expression in derivatives of the Kleinian σ-function of the curve.

  3. PIXE analysis of trace elements in Genus Hippophae L

    International Nuclear Information System (INIS)

    Yin Zhongli; Jiang Xiangzhou; Ma Chengjun; Hao Jifang

    1993-01-01

    Trace elements in four kinds of the Genus Hippophae L pulps were analysed by PIXE. Optimization of the system performance was done by carefully selecting the absorbers. Analytical sensitivities of the PIXE system were obtained by means of 'external standard method'

  4. Resistance to Phytophthora cinnamomi in the Genus Abies

    Science.gov (United States)

    John Frampton; Fikret Isik; Mike Benson; Jaroslav Kobliha; Jan Stjskal

    2012-01-01

    A major limiting factor for the culture of true firs as Christmas trees is their susceptibility to Oomycete species belonging to the genus Phytophthora. In North Carolina alone, the Fraser fir (Abies fraseri [Pursh] Poir.) Christmas tree industry loses 6 to 7 million dollars annually to root rot primarily caused by ...

  5. Checklist of the fish parasitic genus Cichlidogyrus (Monogenea ...

    African Journals Online (AJOL)

    Current knowledge of the 85 species in the genus Cichlidogyrus, collected worldwide, including their hosts, localities and authors, is summarised in a table. Although these parasites occur mainly in Africa, representatives have been recorded on cichlids in Mexico. Their distribution and host specificity are commented on.

  6. Genus Zero Graph Segmentation: Estimation of Intracranial Volume

    DEFF Research Database (Denmark)

    Jensen, Rasmus Ramsbøl; Thorup, Signe Strann; Paulsen, Rasmus Reinhold

    2013-01-01

    present a fully automatic 3D graph-based method for segmentation of the ICV in non-contrast CT scans. We reformulate the ICV segmentation problem as an optimal genus 0 segmentation problem in a volumetric graph. The graph is the result of a volumetric spherical subsample from the data connected using...

  7. Karyotype analyses of the species of the genus Jurinea Cass ...

    African Journals Online (AJOL)

    In this study, karyotype analyses of 13 species belonging to the genus Jurinea Cass. (Compositae) and grown naturally in Turkey were conducted. These taxa include Jurinea alpigena C. Koch, Jurinea ancyrensis Bornm., Jurinea aucherana DC., Jurinea cadmea Boiss., Jurinea cataonica Boiss. and Hausskn., Jurinea ...

  8. Hurleyella, a new genus of Nearctic Dolichopodidae (Diptera)

    Science.gov (United States)

    Justin Runyon; Harold Robinson

    2010-01-01

    The new micro-dolichopodid genus Hurleyella and two new species, H. cumberlandensis and H. brooksi are described from the Nearctic. Hurleyella resembles the subfamily Medeterinae in having the legs bare of major setae, a depressed posterior mesonotum, and concave dorsal postcranium, but the complex male genitalia is unlike the relatively simple structure of...

  9. Infection by larval cestodies of the genus paradilepis in cultured ...

    African Journals Online (AJOL)

    Helminth infection of cultured Oreochromis niloticus was observed in two farms in Abeokuta, Ogun State and Jos, Plateau State. The parasite was identified as the larva of a cestode of the genus Paradilepis. Eggs and larvae were found under the scales and strongly and deeply embedded in fish body. Larvae measured ...

  10. Comparative genomic analysis reveals ecological differentiation in the genus Carnobacterium

    DEFF Research Database (Denmark)

    Iskandar, Christelle F.; Borges, Frédéric; Taminiau, Bernard

    2017-01-01

    was used as a model genus to elucidate the genetic basis of these colonization differences. Analyses of 16S rRNA gene meta-barcoding data showed that C. maltaromaticum followed by C. divergens are the most prevalent species in foods derived from animals (meat, fish, dairy products), and in the gut...

  11. Oribatid mites of the genus Allonothrus (Acari: Oribatida: Crotonioidea)

    African Journals Online (AJOL)

    Summary data on oribatid mites of the genus Allonothrus (Trhypochthoniidae) of the Ethiopian region are presented. A new subspecies, Allonothrus schuilingi seychelli nov. subsp., is described from Seychelles. It is distinguished on the basis of the shape and length of the notogastral and ventral setae. An identification key ...

  12. Bean Pod Mottle Virus (BPMV) (Genus Comovirus ): A Limiting ...

    African Journals Online (AJOL)

    The reactions of twenty soybean varieties to infection with Bean Pod Mottle Virus (BPMV) (Genus Comovirus) disease were studied for 2 consecutive years in the Department of Crop Science University of Nigeria, Nsukka Farm (Latitude 060 25N; Longitude 070 24N; attitude 447.26 m above sea level). Factorial arrangement ...

  13. The Australian endemic woodwasp genus Austrocyrta Riek (Hymenoptera: Xiphydriidae)

    Science.gov (United States)

    J.T. Jennings; A.D. Austin; N.M. Schiff

    2009-01-01

    The Australian xiphydriid woodwasp genus, previously known only from a single species, A. australiensis Riek, is revised. A second distinctive species from Carnarvon National Park in southcentral Queensland, A. fasciculata Jennings & Austin, sp. nov., is described, and a key to separate the males of the two species is provided.

  14. Freshwater nematodes from South Africa. 4. The genus Monhystera ...

    African Journals Online (AJOL)

    Freshwater nematodes from South Africa. 4. The genus Monhystera Bastian, 1865. A.P. Joubert and J. Heyns. Department of Zoology. Rand Afrikaans University. During a survey of freshwater nematodes in South Africa, five species of Monhystera Bastian, 1865, were encountered. The five species, three of which are new to ...

  15. Phytochemical and Pharmacological Studies of the Genus Tacca : A ...

    African Journals Online (AJOL)

    Tacca is an important genus comprising of approximately 15 species of the medicinal plants (Taccaceae). The plants are used in traditional medicine to relieve pains of the body and stomach, as an antidote for food poisoning as well as for their analgesic, antipyretic and anti-inflammatory activities. Chemical studies have ...

  16. Quantum cohomology of moduli spaces of genus zero stable curves

    OpenAIRE

    Fontanari, Claudio

    2007-01-01

    We investigate the (small) quantum cohomology ring of the moduli spaces of stable n-pointed curves of genus 0. In particular, we determine an explicit presentation in the case n=5 and we outline a computational approach to the case n=6.

  17. Surinam Dragon-Flies of the Genus Progomphus

    NARCIS (Netherlands)

    Belle, J.

    1966-01-01

    Up to the present time our knowledge of the genus Progomphus in Surinam has been restricted to that of the three species described by JAMES G. NEEDHAM (Trans. Amer. Ent. Soc. 69, p. 208—214, pl. 15 fig. 13—15). The three species were represented in the Progomphus material which NEEDHAM acquired from

  18. Taxonomic review of the Afrotropical genus Hypselogenia Burmeister (Coleoptera: Cetoniidae)

    NARCIS (Netherlands)

    Krikken, J.

    1979-01-01

    The Afrotropical genus Hypselogenia Burmeister is diagnosed and discussed. The characters of the species and varieties are examined, and presented in a synoptic table and in an analytical key. An annotated checklist of the species and varieties is given. The Leiden collection is fully recorded. Four

  19. A Systematic Review of the Hispaniolan Snake Genus Hypsirhynchus

    NARCIS (Netherlands)

    Schwartz, Albert

    1971-01-01

    One of the least known of the endemic Hispaniolan colubrid snake genera is Hypsirhynchus. The genus was proposed by GUNTHER (1858) for one specimen of a new snake, purportedly from the island of Barbados, to which he gave the name H. ferox. COPE (1862) later described H. scalaris from Hispaniola

  20. New species of the stingless bee genus Schwarziana (Hymenoptera, Apidae

    Directory of Open Access Journals (Sweden)

    Gabriel A.R. Melo

    2015-12-01

    Full Text Available ABSTRACT Two new species of the stingless bee genus Schwarziana from Brazil are described and illustrated. Schwarziana bocainensis sp. nov. is described from Serra da Bocaina, in São Paulo, and S. chapadensis sp. nov. is described from Chapada dos Veadeiros, in Goiás. An identification key to workers of the known species of Schwarziana is provided.