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Sample records for genus hoplias characiformes

  1. Taxonomic study of Hoplias microlepis (Günther, 1864, a trans-Andean species of trahiras (Ostariophysi: Characiformes: Erythrinidae

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    George M. T. Mattox

    Full Text Available The Hoplias malabaricus species group represents one of the most complexes taxonomical problems in the systematics of Neotropical fishes, including specimens widely distributed in most drainages of South America and part of Central America with great variation or overlap of putative diagnostic characters. The large number of nominal species, many of which without known type material, renders the problem more complicated. Currently, at least three nominal species can be included in the Hopliasmalabaricusspecies group based on the form of the medial margins of dentaries and presence of tooth plates on the tongue: Hoplias malabaricus, H. teres, and H. microlepis, the latter representing the only exclusively trans-Andean known species of the genus. We present herein a taxonomic study of Hoplias microlepis based on examination of syntypes and recently collected specimens, including a redescription of the species. Hoplias microlepisoccurs in the Pacific drainages of Panama and Southwestern Costa Rica, in addition to the río Guayas basin in Ecuador and the region near its mouth (río Tumbes, Northwestern Peru. Records of the species on the Atlantic coast of Panama are restricted to the Canal Zone, suggesting dispersal through the Panama Canal. We also designate lectotype and paralectotypes.

  2. Isoform expression in the multiple soluble malate dehydrogenase of Hoplias malabaricus (Erythrinidae, Characiformes

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    M. R. Aquino-Silva

    Full Text Available Kinetic properties and thermal stabilities of Hoplias malabaricus liver and skeletal muscle unfractionated malate dehydrogenase (MDH, EC 1.1.1.37 and its isolated isoforms were analyzed to further study the possible sMDH-A* locus duplication evolved from a recent tandem duplication. Both A (A1 and A2 and B isoforms had similar optima pH (7.5-8.0. While Hoplias A isoform could not be characterized as thermostable, B could as thermolabile. A isoforms differed from B isoform in having higher Km values for oxaloacetate. The possibly duplicated A2 isoform showed higher substrate affinity than the A1. Hoplias duplicated A isoforms may influence the direction of carbon flow between glycolisis and gluconeogenesis.

  3. Isoform expression in the multiple soluble malate dehydrogenase of Hoplias malabaricus (Erythrinidae, Characiformes

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    Aquino-Silva M. R.

    2003-01-01

    Full Text Available Kinetic properties and thermal stabilities of Hoplias malabaricus liver and skeletal muscle unfractionated malate dehydrogenase (MDH, EC 1.1.1.37 and its isolated isoforms were analyzed to further study the possible sMDH-A* locus duplication evolved from a recent tandem duplication. Both A (A1 and A2 and B isoforms had similar optima pH (7.5-8.0. While Hoplias A isoform could not be characterized as thermostable, B could as thermolabile. A isoforms differed from B isoform in having higher Km values for oxaloacetate. The possibly duplicated A2 isoform showed higher substrate affinity than the A1. Hoplias duplicated A isoforms may influence the direction of carbon flow between glycolisis and gluconeogenesis.

  4. Tooth morphology, implantation and replacement system of Hoplias malabaricus (Teleostei, Characiformes, Erythrinidae

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    RM. Hassunuma

    Full Text Available The oropharyngeal cavity of Hoplias malabaricus, an ichthyophagous freshwater fish, is anatomically adapted to predation. Macroscopic and microscopic analyses were conducted in order to study the morphology and system of implantation and replacement of teeth. The results showed that this teleost has conical and caniniform teeth, with an orthodentin crown covered by an enameloid cap and a vascularised orthodentin in the root. With regard to the implantation system, there is a junction between the tooth and the bone tissue, as a typical physiological dental ankylosis. The teeth are replaced by a resorption process of multinucleated giant cells that actively eliminate the dentin and bone tissue.

  5. First data on the parasites of Hoplias aimara (Characiformes): description of two new species of gill monogeneans (Dactylogyridae)

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    Moreira, J.; Scholz, Tomáš; Luque, J.L.

    2015-01-01

    Roč. 60, č. 2 (2015), s. 254-260 ISSN 1230-2821 R&D Projects: GA ČR GBP505/12/G112 Institutional support: RVO:60077344 Keywords : Monogenea * Dactylogyridae * Urocleidoides * Erythrinidae * Hoplias aimara * Xingu River * Brazil Subject RIV: EG - Zoology Impact factor: 1.293, year: 2015

  6. Dactylogyrids (Platyhelminthes, Monogenoidea) from the gills of Hoplias malabaricus (Characiformes: Erythrinidae) from coastal rivers of the Oriental Amazon Basin: species of Urocleidoides and Constrictoanchoratus n. gen.

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    Ferreira, K D C; Rodrigues, A R O; Cunha, J-M; Domingues, M V

    2018-05-01

    Five species of Urocleidoides (one new) and two new species of Constrictoanchoratus n. gen. are described in this study. All were collected from the gills of Hoplias malabaricus (Characiformes: Erythrinidae) captured in six localities of coastal rivers of the north-eastern sector the State of Pará (Oriental Amazon): Urocleidoides brasiliensis Rosim, Mendoza-Franco & Luque, 2011; Urocleidoides bulbophallus n. sp.; Urocleidoides cuiabai Rosim, Mendoza-Franco & Luque, 2011; Urocleidoides eremitus Kritsky, Thatcher & Boeger, 1986; Urocleidoides malabaricusi Rosim, Mendoza-Franco & Luque, 2011; Constrictoanchoratus lemmyi n. gen. n. sp.; and Constrictoanchoratus ptilonophallus n. gen. n. sp. This is the first reported occurrence of the four previously described species of Urocleidoides parasitizing H. malabaricus from streams in the Oriental Amazon Basin. The analysis of voucher specimens of U. eremitus parasitizing the gills of H. malabaricus from the Upper Paraná River floodplain in the limits of States of Paraná and Mato Grosso do Sul, Brazil, indicates that these specimens are members of a new species of Urocleidoides, described here as Urocleidoides paranae n. sp. Constrictoanchoratus n. gen. is proposed for the species with a male copulatory organ sclerotized, coiled, clockwise; ventral anchor with elongate superficial root, inconspicuous deep root; dorsal anchor with inconspicuous roots, and a constriction at the intersection between the shaft and the point. The host-parasite diversity scenario and host specificity of the species of Constrictoanchoratus n. gen. and Urocleidoides from the gills of H. malabaricus are also discussed in this study.

  7. Biologia de Hoplias malabaricus (Bloch, 1794) (Characiformes, Erythrinidae) na Represa de Capim Branco I, Rio Araguari, MG

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    Martins, Janainna Maria Eustáquio

    2009-01-01

    Estudos da biologia de Hoplias malabaricus no que diz respeito à estrutura populacional, crescimento, reprodução e alimentação foram desenvolvidos num trecho do reservatório recém formado pela Usina Capim Branco I, Rio Araguari, MG. As fases de campo compreenderam o período de julho de 2006 a junho de 2007, tendo sido capturados 114 indivíduos da espécie. A espécie foi constante em todos os meses de coleta, com abundância mais elevada em setembro, outubro e novembro de 2006. As...

  8. Anatomy of the buccopharyngeal cavity of trairão, Hoplias Lacerdae Miranda Ribeiro, 1908 (Characiformes, Erythrinidae

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    Cláudia Maria Reis Raposo Maciel

    2009-09-01

    Full Text Available We studied the buccopharyngeal cavity anatomy of 20 male and female trairão, Hoplias lacerdae (Miranda Ribeiro, 1908 specimens, with 24.41cm average standard-length, fixed in 4% formalin aqueous solution and/or diaphanized and colored with alizarin and alcian blue. The anatomical characteristics of the H. lacerdae buccopharyngeal cavity are: thin lips adherent to the respective maxilla; oral dentition consisting of canine and conical teeth, implanted in the premaxillary, maxillary and dentary arches, and conical teeth in the ectopterygoid and accessory ectopterygoid; smooth tongue, with free apex; dentigerous plates, with conical teeth covering gill arches on the external and internal faces; few gill rakes in gill arch I, with denticles; pharyngeal dental apparatus developed, with conical teeth implanted in the II, III and IV pharyngobranchial and V ceratobranchial cartilage; mucosal layer without significant relief. These characteristics confirm the trairão as being carnivorous in habit, preferentially ictiophagous.

  9. Nematodes in Hoplerytrinus unitaeniatus, Hoplias malabaricus and Pygocentrus nattereri (pisces characiformes in Marajó Island, Brazil Nematóides em Hoplerytrinus unitaeniatus, Hoplias malabaricus e Pygocentrus nattereri (pisces characiformes na Ilha de Marajó, Brasil

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    Raimundo Nonato Moraes Benigno

    2012-06-01

    Full Text Available The aim of this study was to evaluate the tegument, musculature and mesentery of 102 specimens of Hoplerytrinus unitaeniatus, 104 of Hoplias malabaricus and 101 of Pygocentrus nattereri, from Arari Lake, Marajó Island, State of Pará, Brazil. Were identified the nematodes Contracaecum sp., Eustrongylides sp. and Procamallanus sp. Contracaecum sp. was the most prevalent, with rates of 84.31% (H. unitaeniatus, 95.19% (H. malabaricus, and 89.11% (P. nattereri. The highest prevalences of Eustrongylides sp. occurred in H. unitaeniatus (56.86% and H. malabaricus (53.84%. Procamallanus sp. was only collected in the mesentery. Specimens of Eustrongylides sp. collected from the musculature were 91.9% of its population. Among the nematodes found in the mesentery, 98.34% were Contracaecum sp. with a mean intensity (MI of 7.92 ± 8.11 (H. unitaeniatus, 8.49 ± 8.34 (H. malabaricus and 7 ± 6.40 (P. nattereri. Contracaecum sp. presented the highest MI (8.49 ± 8.34 and mean abundance (8.09 ± 8.34. The highest MI values were observed in the mesentery. Eustrongylides sp. presented MI of 2.65 ± 3.21 (H. unitaeniatus, 3.41 ± 3.27 (H. malabaricus and 2.17 ± 1.18 (P. nattereri. Nematodes with zoonotic potential that were found with high prevalence, shows the importance of actions by the health authorities.Examinou-se o tegumento, mesentério e musculatura de 102 espécimes de Hoplerytrinus unitaeniatus, 104 de Hoplias malabaricus e 101 de Pygocentrus nattereri, do Lago Arari, Ilha do Marajó, Estado do Pará, Brasil. Foram identificados os nematóides Contracaecum sp., Eustrongylides sp. e Procamallanus sp. nas três espécies de peixes. Contracaecum sp. foi o mais prevalente, com índices de 84,31% (H. unitaeniatus, 95,19% (H. malabaricus e 89,11% (P. nattereri. As maiores prevalências de Eustrongylides sp. foram observadas em H. unitaeniatus (56,86% e H. malabaricus (53,84%. Procamallanus sp. só foi coletado no mesentério, sendo o sítio de infec

  10. Nematodes in Hoplerytrinus unitaeniatus, Hoplias malabaricus and Pygocentrus nattereri (pisces characiformes) in Marajó Island, Brazil.

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    Benigno, Raimundo Nonato Moraes; Clemente, Sérgio Carmona de São; Matos, Edilson Rodrigues; Pinto, Roberto Magalhães; Gomes, Delir Corrêa; Knoff, Marcelo

    2012-01-01

    The aim of this study was to evaluate the tegument, musculature and mesentery of 102 specimens of Hoplerytrinus unitaeniatus, 104 of Hoplias malabaricus and 101 of Pygocentrus nattereri, from Arari Lake, Marajó Island, State of Pará, Brazil. Were identified the nematodes Contracaecum sp., Eustrongylides sp. and Procamallanus sp. Contracaecum sp. was the most prevalent, with rates of 84.31% (H. unitaeniatus), 95.19% (H. malabaricus), and 89.11% (P. nattereri). The highest prevalences of Eustrongylides sp. occurred in H. unitaeniatus (56.86%) and H. malabaricus (53.84%). Procamallanus sp. was only collected in the mesentery. Specimens of Eustrongylides sp. collected from the musculature were 91.9% of its population. Among the nematodes found in the mesentery, 98.34% were Contracaecum sp. with a mean intensity (MI) of 7.92 ± 8.11 (H. unitaeniatus), 8.49 ± 8.34 (H. malabaricus) and 7 ± 6.40 (P. nattereri). Contracaecum sp. presented the highest MI (8.49 ± 8.34) and mean abundance (8.09 ± 8.34). The highest MI values were observed in the mesentery. Eustrongylides sp. presented MI of 2.65 ± 3.21 (H. unitaeniatus), 3.41 ± 3.27 (H. malabaricus) and 2.17 ± 1.18 (P. nattereri). Nematodes with zoonotic potential that were found with high prevalence, shows the importance of actions by the health authorities.

  11. Sperm evolution in the family Alestidae with comparative data for the genus Chalceus (Ostariophysi: Characiformes

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    Júlio César de O. Santana

    Full Text Available Spermiogenesis and spermatozoa in six genera of the African family Alestidae plus the Neotropical genus Chalceusare described. Spermiogenesis is quite similar in all Alestidae and is identified as Type I and its variants. In Type I spermiogenesis, the flagellum of earliest spermatids lies lateral to the nucleus, and rotation of the nucleus towards the centriolar complex is observed. Nuclear rotation is complete reaching 90 degrees in Bryconalestes longipinnis, Brachypetersius altus, Brycinus imberi, B. lateralis, and Alestopetersius compressus; and is incomplete reaching 20 degrees in Micralestes acutidensand Rhabdalestesrhodesiensis. Spermatozoa morphology varies from a medial nucleus with fibrillar chromatin in the most basal genus Brycinusto a strongly eccentric nucleus with highly condensed chromatin in the more derived Rhabdalestesand Micralestes. Chalceushas a very similar spermatozoon to that found in Brycinussharing the fibrillar aspect of the chromatin in the nucleus. This feature is so far only observed in these two genera among African and Neotropical characiform fishes.

  12. Revision of the Neotropical trahiras of the Hoplias lacerdae species-group (Ostariophysi: Characiformes: Erythrinidae with descriptions of two new species

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    Osvaldo T. Oyakawa

    Full Text Available Hoplias lacerdae was originally described from the rio Ribeira de Iguape, Iporanga, São Paulo State. The Hoplias lacerdae group is defined as containing generally large trahiras with the medial margins of dentaries running parallel to each other and lacking teeth on the basihyal compared to the H. malabaricus group in which the medial margins of the dentaries converge towards the mandibular symphysis and which have teeth on the basihyal. A taxonomic revision of the group based on meristic and morphometric data identified five distinct species: H. lacerdae distributed in the rio Ribeira de Iguape and rio Uruguai; H. intermedius from the rio São Francisco, upper rio Paraná basin, and rio Doce; H. brasiliensis from rivers of the Atlantic Coastal drainage from the rio Paraguaçu to the rio Jequitinhonha; H. australis new species, endemic to the rio Uruguai; and H. curupira new species present in northern South America, including the rios Negro, Trombetas, Tapajós, Xingu, Tocantins and Capim in the Amazon basin, upper rio Orinoco near the rio Casiquiare (Venezuela, and coastal rivers of Guyana and Suriname. A lectotype for Hoplias intermedius and a neotype for H. brasiliensis are designated.

  13. Cytogenetic variation of repetitive DNA elements in Hoplias malabaricus (Characiformes - Erythrinidae) from white, black and clear water rivers of the Amazon basin.

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    Santos, Fabíola Araújo Dos; Marques, Diego Ferreira; Terencio, Maria Leandra; Feldberg, Eliana; Rodrigues, Luís Reginaldo R

    2016-03-01

    Hoplias malabaricus is a common fish species occurring in white, black and clear water rivers of the Amazon basin. Its large distribution across distinct aquatic environments can pose stressful conditions for dispersal and creates possibilities for the emergence of local adaptive profiles. We investigated the chromosomal localization of repetitive DNA markers (constitutive heterochromatin, rDNA and the transposable element REX-3) in populations from the Amazonas river (white water), the Negro river (black water) and the Tapajós river (clear water), in order to address the variation/association of cytogenomic features and environmental conditions. We found a conserved karyotypic macrostructure with a diploid number of 40 chromosomes (20 metacentrics + 20 submetacentrics) in all the samples. Heteromorphism in pair 14 was detected as evidence for the initial differentiation of an XX/XY system. Minor differences detected in the amount of repetitive DNA markers are interpreted as possible signatures of local adaptations to distinct aquatic environments.

  14. Reproductive dynamics and population structure of Hoplias aff. malabaricus (Bloch, 1794 (Characiformes, Erythrinidae in the dam lake of the Taperoá River Basin, Paraíba

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    Maria Cristina Crispim

    2009-06-01

    Full Text Available This work aims to verify the reproductive dynamics and growth of the Hoplias aff. malabaricus species in the Taperoá II dam lake (07º11’44”S, 07º13’44”S, located in the basin of the River Taperoá in the Cariri region of Paraiba. Sixty-seven individuals were collected (August-December 2002, January-February, May and June 2003 by means of gillnets and cast nets. The interference of the rain regimen in the reproductive behavior and the structure of growth of the species were observed after the macrocospic analysis of the gonads of the collected units.

  15. Genetic damage induced by trophic doses of lead in the neotropical fish Hoplias malabaricus (Characiformes, Erythrinidae as revealed by the comet assay and chromosomal aberrations

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    Marta Margarete Cestari

    2004-01-01

    Full Text Available The effects of clastogenic or mutagenic agents have rarely been studied in neotropical fish species exposed to contaminated water. In this study, the genetic damage caused by lead in the widely distributed South American fish, Hoplias malabaricus, was assessed using the comet (SCGE assay and by testing for chromosomal aberrations. Eighteen specimens were acclimatized to laboratory conditions and then chronically exposed to contaminated food by feeding prey (Cyprinus sp. injected intraperitoneally with doses of inorganic lead adjusted to give a contamination level of 21 mg of Pb2+.g-1 net weight of H. malabaricus. Three fish were sampled for chromosomal analysis after four doses (18 days and another three after eight doses (41 days of lead and the results then compared with three untreated controls kept under lead-free conditions. An additional six treated fish and three controls were sampled for the comet assay after 13 doses (64 days. Exposure to lead significantly increased the frequency of chromosomal aberrations and the frequency of tailed cell nuclei, the latter indicating DNA damage. These results show that H. malabaricus is a useful biological model for screening the clastogenic effects of lead and possibly other xenobiotics. The genetic damage seen here illustrates the need to investigate the potential effects of heavy metals on fish species in South America.

  16. Population structure and stock assessment of Hoplias malabaricus (Characiformes: Erythrinidae caught by artisanal fishermen in river-reservoir transition area in Brazil

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    José Luís Costa Novaes

    2011-03-01

    Full Text Available Hoplias malabaricus is a viable economic alternative for artisanal fishermen who used to live on the banks of rivers that now are dammed in Brazil. In order to preserve the species’ natural stock, the main objectives of this study were to obtain bio-ecological information on this species reproduction, feeding dynamics and the description of the extent of its exploitation in river-reservoir transition area in Brazil. This way, from January to December 2005, different fishery catches were made with gill nets by artisanal fishermen, and a total of 426 individual H. malabaricus were obtained and sampled. From each specimen, the following biometric and biological data were analyzed: standard length, total weight, stomach contents, reproductive data such as sex, weight and gonadal maturation stage; with these data we estimated sex ratio, reproduction period and feeding habits. To assess growth parameters and infer on the degree of exploitation, the standard length frequency data were analysed using the FISAT (ELEFAN I computer program. Data revealed a sex ratio of 0.8:1 (M:F, that reproduction occurs all year around, being more intense during spring and summer; it also showed that H. malabaricus is piscivorous. The growth parameters and mortality were estimated at: L∞=35.18cm, k=0.32 year, longevity=9.3 years, Z=1.25 years, M=0.63 year and F=0.62 year. The weight-length relationship was: ln Wt=-3.1663+2.7456 ln Lp. The yield-per-recruit analysis produced the following values: E=0.496, Emax=0.916, E0.1=0.701 and E0.5=0.378. Overall, our data suggest that the stock of H. malabaricus is not yet overfished in the studied area. Rev. Biol. Trop. 59 (1: 71-83. Epub 2011 March 01.Hoplias malabaricus representa una alternativa económica viable para los pescadores artesanales que viven a la orilla de ríos que actualmente cuentan con represas en Brasil. El objeto del presente estudio fue evaluar la dinámica de la reproducción, alimentación, crecimiento

  17. Basic cytogenetics and physical mapping of 5S and 18S ribosomal genes in Hoplias malabaricus (Osteichthyes, Characiformes, Erythrinidae) from isolated natural lagoons: a conserved karyomorph along the Iguaçu river basin.

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    Gemi, Gisele; Lui, Roberto Laridondo; Treco, Fernando Rodrigo; Paiz, Leonardo Marcel; Moresco, Rafaela Maria; Margarido, Vladimir Pavan

    2014-01-01

    Erythrinidae include Neotropical teleost fish that are widely distributed in South America. Hoplias Gill, 1903 include two large groups: H. malabaricus Bloch, 1794 and H. lacerdae Miranda Ribeiro, 1908. Hoplias malabaricus is characterized by remarkable karyotype diversity, with some karyomorphs widely distributed geographically while others are more restricted to certain river basins. Cytogenetic analyzes were performed in a population of Hoplias malabaricus from the Wildlife Refuge of Campos de Palmas, the Iguaçu River basin. The specimens showed diploid number of 42 chromosomes (24m+18sm) without differentiated sex chromosomes system. The impregnation by silver nitrate showed multiple AgNORs. Seven pairs (4, 7, 10, 13, 16, 20 and 21) carrying 18S rDNA were detected by FISH. Heterochromatin was verified in the centromeric and pericentromeric region of most chromosomes and the terminal region of some pairs. FISH with 5S rDNA probes showed two chromosome pairs carrying these sites in the interstitial region (8 and 14). The data obtained in this study are similar to those found for two other populations of H. malabaricus already studied in the basin of the Iguaçu River, confirming the hypothesis that this species is natural, not having been introduced, as well as having an intrinsic characteristic, such as the largest number of sites of 18S rDNA.

  18. A new genus of Anostomidae (Ostariophysi: Characiformes): Diversity, phylogeny and biogeography based on cytogenetic, molecular and morphological data.

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    Ramirez, Jorge L; Birindelli, José L O; Galetti, Pedro M

    2017-02-01

    A new genus of Anostomidae (Characiformes) is described to include ten valid extant species previously classified in Leporinus or Hypomasticus and distributed throughout most major river basins in South America: L. brinco, L. conirostris, L. elongatus, H. garmani, L. macrocephalus, L. muyscorum, L. obtusidens, L. piavussu, L. reinhardti, and L. trifasciatus. The monophyly of Megaleporinus is well-supported in a phylogenetic analysis based on two mitochondrial and three nuclear genes, as well as its sister group relationship to Abramites. Megaleporinus is diagnosed by having the exclusive combination of three unicuspid teeth on each premaxillary and dentary bone and a color pattern composed of one to four dark midlateral blotches. Additional distinguishing features and possible synapomorphies include a unique ZZ/ZW sex chromosome system confirmed for six congeners and a drumming apparatus wherein the first rib is elongated and associated with hypertrophied intercostal muscles, which was confirmed for three congeners as exclusive to mature males. Furthermore, our study identified at least four undescribed cryptic species, emphasizing the need for further taxonomic work and genetic analyses. A time-calibrated phylogenetic and biogeographical analysis of the new genus suggests that speciation in the proto-Amazon-Orinoco lineage was primarily driven by paleogeographic processes, such as the formation of the Orinoco and Tocantins basins. Dispersal and diversification of the genus in coastal basins draining the Eastern Brazilian Shield appears to have been facilitated by connections between paleo-basins during low sea level periods and headwater captures between coastal and inland watersheds. The present contribution demonstrates the importance of integrating data from morphology, DNA sequences and cytogenetics to advance the taxonomy and systematics of any complex species group. Copyright © 2016 Elsevier Inc. All rights reserved.

  19. Desenvolvimento morfológico das larvas de Hoplias lacerdae Miranda Ribeiro, 1908 (Characiformes, Erythrinidae, da eclosão até a metamorfose, relacionado com a capacidade de capturar alimento exógeno

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    Cláudia Maria Reis Raposo Maciel

    2009-06-01

    Full Text Available http://dx.doi.org/10.5007/2175-7925.2009v22n3p103 Para a realização deste trabalho foram utilizados 510 exemplares de Hoplias lacerdae, com um a 30 dias após a eclosão, com o objetivo de estudar as características morfológicas, mesoscópicas, que capacitam essa espécie, nas fases iniciais do seu desenvolvimento, a apresentarem estruturas adaptadas para se locomoverem e capturarem alimento exógeno. As larvas vitelínicas com 11 dias após a eclosão têm potencialidade para capturar alimento exógeno, ou seja, presas, mesmo antes da absorção total do vitelo, o que acontece com 12 dias. Nesta fase apresentam: boca aberta com um dia após a eclosão e posição terminal aos quatro dias; aos sete dias demonstram flexão da notocorda, proporcionando maior eficiência locomotora, bem como apresenta neste período nadadeiras peitorais desenvolvidas, as quais facilitam o equilíbrio e direcionamento na coluna d’água; e aos oito dias visualizou-se a formação das nadadeiras dorsal e anal, porém as nadadeiras pélvicas foram visualizadas aos 11 dias.

  20. Highly conserved Z and molecularly diverged W chromosomes in the fish genus Triportheus (Characiformes, Triportheidae)

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    Yano, C. F.; Bertollo, L.A.C.; Ezaz, T.; Trifonov, V.; Sember, Alexandr; Liehr, T.; Cioffi, M.B.

    2017-01-01

    Roč. 118, č. 3 (2017), s. 276-283 ISSN 0018-067X Institutional support: RVO:67985904 Keywords : W chromosomes * fish genus Triportheus Subject RIV: EA - Cell Biology OBOR OECD: Biology (theoretical, mathematical, thermal, cryobiology, biological rhythm), Evolutionary biology Impact factor: 3.961, year: 2016

  1. Revision of the South American freshwater fish genus Laemolyta Cope, 1872 (Ostariophysi: Characiformes: Anostomidae

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    Kelly Cristina Mautari

    Full Text Available The anostomid genus Laemolyta Cope, 1872, is redefined.Various morphological, especially osteological characters in addition to the commonly utilized features of dentition proved useful for its characterization. A taxonomic revision of all species was made using meristics, morphometrics and color pattern. Five species are recognized: Laemolyta fernandezi Myers, 1950, from the río Orinoco (Venezuela and the sub-basins Tocantins/Araguaia and Xingu, L. orinocensis (Steindachner, 1879, restricted to the río Orinoco, L. garmani (Borodin, 1931 and L. proxima (Garman, 1890, from the Amazon basin with the latter also occurring in the Essequibo River (Guiana, and L. taeniata (Kner, 1859, from the Amazon and Orinoco basins. Laemolyta garmani macra is considered a synonym of L. garmani, L. petiti a synonym of L. fernandezi, and L. nitens and L. varia synonyms of L. proxima. Lectotypes are designated herein for L. orinocencis and L. taeniata.

  2. Revealing Hidden Diversity of the Underestimated Neotropical Ichthyofauna: DNA Barcoding in the Recently Described Genus Megaleporinus (Characiformes: Anostomidae

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    Jorge L. Ramirez

    2017-10-01

    Full Text Available Molecular studies have improved our knowledge on the neotropical ichthyofauna. DNA barcoding has successfully been used in fish species identification and in detecting cryptic diversity. Megaleporinus (Anostomidae is a recently described freshwater fish genus within which taxonomic uncertainties remain. Here we assessed all nominal species of this genus using a DNA barcode approach (Cytochrome Oxidase subunit I with a broad sampling to generate a reference library, characterize new molecular lineages, and test the hypothesis that some of the nominal species represent species complexes. The analyses identified 16 (ABGD and BIN to 18 (ABGD, GMYC, and PTP different molecular operational taxonomic units (MOTUs within the 10 studied nominal species, indicating cryptic biodiversity and potential candidate species. Only Megaleporinus brinco, Megaleporinus garmani, and Megaleporinus elongatus showed correspondence between nominal species and MOTUs. Within six nominal species, a subdivision in two MOTUs was found, while Megaleporinus obtusidens was divided in three MOTUs, suggesting that DNA barcode is a very useful approach to identify the molecular lineages of Megaleporinus, even in the case of recent divergence (< 0.5 Ma. Our results thus provided molecular findings that can be used along with morphological traits to better define each species, including candidate new species. This is the most complete analysis of DNA barcode in this recently described genus, and considering its economic value, a precise species identification is quite desirable and fundamental for conservation of the whole biodiversity of this fish.

  3. Myxiops aphos, new characid genus and species (Characiformes: Characidae from the rio Lençóis, Bahia, Brazil

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    Angela M. Zanata

    Full Text Available Myxiops aphos, new genus and species, is described from a river in the eastern portion of Bahia State, Brazil. Myxiops is distinguished from all other characid genera by the combination of the following features: infraorbitals fused in a unique fashion, resulting always in less than six autogenous bones; a single tooth row in the premaxilla; presence of somewhat pedunculate teeth, expanded and compressed distally, with cusps similar in shape and perfectly aligned along distal margin; ventral margin of toothed portion of maxillary curved towards ventral margin of premaxilla and maxillary teeth forming a continuous series with premaxillary teeth; margins of pre- and postzygapophyses with projections anteriorly and posteriorly directed; accumulation of epithelial cells forming globular structures distributed over head and scales; and base of anal fin without scales covering basal portion of unbranched and anterior branched rays. The presence of these features in other characids is discussed.

  4. A revision of the cis-andean species of the genus Brycon Müller & Troschel (Characiformes: Characidae).

    Science.gov (United States)

    Lima, Flávio C T

    2017-01-22

    , Bolivia, Venezuela, and Guyana; Brycon gouldingi Lima, endemic from the rio Tocantins basin, Brazil; Brycon melanopterus (Cope), from the western and central rio Amazonas basin, Brazil, Peru, Ecuador, and Colombia; and Brycon falcatus Müller & Troschel, widespread in the the rio Amazonas and Río Orinoco basins, and several guyanese river systems, in Brazil, Venezuela, Colombia, Peru, Bolivia, Guyana, Suriname, and French Guiana. All species are redescribed and illustrated, and a key to the species is provided. Comments on the diagnosis of the genus Brycon, the biogeography of the cis-andean species, and their current conservation status, are presented.

  5. A new species of Auriculostoma (Trematoda: Allocreadiidae) from the intestine of Brycon guatemalensis (Characiformes: Bryconidae) from the Usumacinta River Basin, Mexico, based on morphology and 28S rDNA sequences, with a key to species of the genus.

    Science.gov (United States)

    Hernández-Mena, David Iván; Lynggaard, Christina; Mendoza-Garfias, Berenit; DE León, Gerardo Pérez-Ponce

    2016-11-22

    We describe a new species of Auriculostoma Scholz, Aguirre-Macedo & Choudhury, 2004 based on several sources of information including morphology (light and scanning electron microscopy [SEM]), sequences of two nuclear genes, host association, and geographical distribution. Morphologically, the new species most closely resembles Auriculostoma astyanace Scholz, Aguirre-Macedo & Choudhury, 2004, but differs by having deeply lobated testes and cirrus-sac extending posteriorly to seminal receptacle level. Auriculostoma lobata n. sp. can be readily distinguished from all the other congeners by the combination of the following characters: testes located in tandem, testes deeply lobated, and larger body size. A phylogenetic analysis using 28S rDNA sequences along with those available for other allocreadiid trematodes, revealed that the new species is a sister taxon of A. astyanace, a species described from the banded astyanax, Astyanax fasciatus (Cuvier) in Nicaragua. Auriculostoma totonacapanensis Razo-Mendivil, Mendoza-Garfias, Pérez-Ponce de León & Rubio-Godoy, 2014 from the Mexican tetra, Astyanax mexicanus (De Filippi) in Mexico is the sister taxon of A. astyanace plus the new species. Genetic divergence levels for the 28S rDNA and ITS2 were estimated among the Middle-American species of Auriculostoma infecting characiforms. The validity of the new species is then established by reliable morphological differences, its host association to bryconids (Brycon guatemalensis Regan), restricted geographical distribution (Usumacinta and Lacantun River basins), and genetic divergence levels, albeit relatively low. A morphometric comparison between the new species and the other seven congeneric species was undertaken and, in addition, a taxonomic key to identify the species contained in the genus Auriculostoma, widely distributed across the Americas, is provided.

  6. Lophiobrycon weitzmani, a new genus and species of glandulocaudine fish (Characiformes: Characidae from the rio Grande drainage, upper rio Paraná system, southeastern Brazil

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    Ricardo M. C. Castro

    Full Text Available A new genus and species of glandulocaudine, Lophiobrycon weitzmani, is described based on specimens collected in headwater tributary streams of the rio Grande, upper rio Paraná system, State of Minas Gerais, southeastern Brazil. The inclusion of the new species in the phylogeny of the subfamily Glandulocaudinae proposed by Weitzman & Menezes (1998, reveals a sister group relationship between the new genus and the monophyletic group composed of Glandulocauda and Mimagoniates that currently form the tribe Glandulocaudini. The new species can be readily distinguished from all other species of the tribe by the autapomorphic presence in adult male individuals (with more than 23.9 mm standard length of an adipose-fin whose base extends for almost the entire distance between the posterior terminus of the base of the dorsal fin and the base of the upper lobe of the caudal fin and averages approximately 25% standard length, along with the presence of globular expansions formed by the lepidotrichia and hypertrophied soft tissue in the middle portions of the first and second pectoral-fin rays. The diagnosis of the tribe Glandulocaudini is modified to accommodate the new genus.

  7. Putative relationships among inseminating and externally fertilizing characids, with a description of a new genus and species of Brazilian inseminating fish bearing an anal-fin gland in males (Characiformes: Characidae

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    Stanley H. Weitzman

    Full Text Available A new inseminating fish species of the family Characidae, Bryconadenos tanaothoros, from tributaries of the upper rio Xingu and upper rio Tapajós basins, Mato Grosso, Brazil is described as the type species of a new genus. This new species and the genus are characterized by a glandular organ on the anterior region of the anal fin of sexually mature males, curved lower jaw teeth, and an inseminating reproductive mode. This new genus is hypothesized as most closely related to Attonitus, a genus with three inseminating species from Peru. Bryconadenos and Attonitus are suggested as related to certain inseminating, but undescribed characid species of uncertain relationships that are similar in certain respects to species of the glandulocaudine Planaltina and to the inseminating species of Knodus. These and a few other inseminating characids are included in a previous tentative characid subgroup designated as Clade A. No species among a relatively small sample of the many species of the Clade A genus Bryconamericus were found inseminating, except Bryconamericus pectinatus. However, newly collected specimens of B. pectinatus were found to have caudal-fin squamation like that of the species of Knodus and this species is here tentatively referred to Knodus. Our investigations indicate that at least several species of Knodus, including the type species, Knodus meridae, are not inseminating, but we found two inseminating apparently new characid species that currently would be referred to Knodus. These species lack the derived anal-fin rays present in the males of K. pectinatus. Other Clade A taxa known to be inseminating, such as two species of the large genus Creagrutus, three species of Monotocheirodon (two undescribed, and the species and genera of the characid subfamily Glandulocaudinae are briefly discussed regarding possible relationships to Attonitus and Bryconadenos. The anatomical aspects of the primary and secondary sexual characteristics of

  8. A new species of Chrysobrycon (Characiformes, Characidae, Stevardiinae) from the Amazon River basin in Colombia, with a new diagnostic characteristic for the genus.

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    Vanegas-Ríos, J A; Urbano-Bonilla, A

    2017-06-01

    Chrysobrycon mojicai sp. nov. is described from forest streams that are part of the Amazon River basin in Colombia. It is distinguished from all congeners by having most of the maxillary teeth with distal tips lateroventrally curved (v. teeth straight along their lengths) and a greater number of dentary teeth (20-27 v. 11-19, except in Chrysobrycon yoliae). The posterior margin of the ventral process of the quadrate does not reach the vertical through the posterior margin of the symplectic and these features differentiate C. mojicai from Chrysobrycon myersi and C. yoliae (v. posterior margin of ventral process of quadrate reaching vertical through posterior margin of symplectic). In species of Chrysobrycon, the frontals are extensively contacting each other along the midline, resulting in an absent frontal fontanel and a reduced parietal fontanel. This extensive contact between the frontals modifying the fontanels is a condition rarely found within the Stevardiinae and hence is proposed as an additional diagnostic characteristic for the genus. An updated identification key for all Chrysobrycon species is provided. © 2017 The Fisheries Society of the British Isles.

  9. Arrhinolemur scalabrinii Ameghino, 1898, of the late Miocene : a taxonomic journey from the Mammalia to the Anostomidae (Ostariophysi: Characiformes

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    Sergio Bogan

    Full Text Available The fossil species Arrhinolemur scalabrinii, which was described from late Miocene deposits of Entre Ríos, Argentina, is reevaluated. Whereas the species was originally placed in the Primates (Mammalia and later made the unique member of the order Arrhinolemuroidea within the Mammalia, our analysis indicates that the specimen is rather a fish of the genus Leporinus, family Anostomidae (Characiformes. The species is redescribed, and the characters that support its new generic assignment are discussed.

  10. Descrição de nove espécies novas de Phenacogaster (Ostariophysi: Characiformes: Characidae e comentários sobre as demais espécies do gênero Description of nine new species of Phenacogaster (Ostariophysi: Characiformes: Characidae and notes on the other species of genus

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    Zilda Margarete Seixas de Lucena

    2010-04-01

    Full Text Available Nine new species of Phenacogaster Eigenmann, 1907 are described: Phenacogaster capitulatus sp. nov. from the Neshuya River system, Ucayali River basin; Phenacogaster maculoblongus sp. nov. from the upper Cuyuni River, and tributaries of the lower Orinoco River; Phenacogaster napoatilis sp. nov. from the Napo River system, upper Amazon River basin; Phenacogaster ojitatus sp. nov. from the Xingu River system; Phenacogaster prolatus sp. nov. from the Orinoco River, canal Casiquiare and upper and middle Negro River; Phenacogaster retropinnus sp. nov. from the Negro, Madeira and Xingu river systems; Phenacogaster simulatus sp. nov. from the Potaro River, Essequibo drainage; Phenacogaster wayampi sp. nov. from the Oiapoque River, and Phenacogaster wayana sp. nov. from the Corantijn (Suriname, Maroni, Mana, Sinnamary and Approuague rivers (French Guiana. The geographic distribution of P. megalostictus, previously recorded for the Negro River, Amazon River system, is restricted to the Essequibo River system, Guiana. The distribution of P. carteri, previously known only from the type-locality (Cuyuni River, Guyana, is extended to the lower Orinoco River. The reduction of the latero-sensory canal, mentioned in the literature as an autapomorphy for P. tegatus was observed in three additional species of Phenacogaster. The posterior humeral spot, found only in P. tegatus, is herein considered autapomorphic for the species. Diagnoses are given for previously described species based on the analysis of type material and additional specimens, and a key to the species of the genus is provided.

  11. Comparative cytogenetics of Hoplias malabaricus (Pisces, Erythrinidae): a population analysis in adjacent hydrographic basins

    OpenAIRE

    Vicari, Marcelo Ricardo; Artoni, Roberto Ferreira; Bertollo, Luiz Antonio Carlos

    2005-01-01

    The chromosomes of specimens from four Hoplias malabaricus populations from headwaters of adjacent river basins at Ponta Grossa, southern Brazil, were investigated using differential staining techniques (C-banding, AgNO3 and CMA3) and fluorescent in situ hybridization (FISH) with an 18S rDNA probe. The diploid chromosome number in representatives of all four populations was invariably 2n = 42, with karyotypes composed of 12 pairs of metacentrics and 9 pairs of submetacentrics, without heterom...

  12. Possible uses of the layered structure found in the scales of Hoplia coerulea (Coleoptera)

    Science.gov (United States)

    Vigneron, Jean-Pol; Rassart, Marie; Simonis, Priscilla; Colomer, Jean-Francois; Bay, Annick

    2009-08-01

    The male of the beetle Hoplia coerulea is known for its spectacular blue-violet iridescence. The blue coloration is caused by the presence of an interesting photonic structure inside the scales which cover the dorsal parts of the insect's body. This structure can be described as the stacking of chitin plates supporting arrays of parallel rods. The change of colour of this structure with humidity is investigated, as well as its response to some other external conditions, such as mechanical strain.

  13. Taxonomic revision and molecular phylogeny of Gymnocorymbus Eigenmann, 1908 (Teleostei, Characiformes, Characidae).

    Science.gov (United States)

    Benine, Ricardo C; Melo, Bruno F; Castro, Ricardo M C; Oliveira, Claudio

    2015-05-07

    Characidae, one of the most diverse families of Characiformes and one of the largest clades of fishes in the world, has a complex taxonomic background, with one issue being the placement of various genera, including Gymnocorymbus. Herein, we generate the first molecular phylogeny for the genus using three nuclear and two mitochondrial loci and review the systematics of Gymnocorymbus. This genus includes the black tetra, a well-known and popular species among aquarists. Molecular phylogeny strongly supports the monophyly of Gymnocorymbus, with this hypothesis corroborated by the presence of three morphological synapomorphies. Of the six previously known nominal species of Gymnocorymbus, three are considered valid herein: Gymnocorymbus bondi from the Río Orinoco basin, Gymnocorymbus ternetzi from the Rio Paraguay basin, and Gymnocorymbus thayeri from the Corantijn and Amazon basin and rivers of northeastern Brazil. A fourth species, Gymnocorymbus flaviolimai sp. n., is described from the Rio Madeira, Amazon basin. Lectotypes are designated for G. ternetzi and G. thayeri. Our results support previous hypotheses of the alignment of Gymnocorymbus close to the subfamily Stethaprioninae and also support the sister relationship between G. ternetzi and G. thayeri, and of that clade as sister to G. bondi.

  14. Scale coloration change following water absorption in the beetle Hoplia coerulea (Coleoptera)

    Science.gov (United States)

    Rassart, Marie; Simonis, Priscilla; Bay, Annick; Deparis, Olivier; Vigneron, Jean Pol

    2009-09-01

    The blue scales on the cuticle of the male beetle Hoplia coerulea can absorb water, with the consequence that these scales, which have been shown to be responsible for the beetle’s bright blue coloration, reversibly turn to emerald green with increasing water contents. Optical measurements are shown, by analytic photonic-crystal models, to be compatible with the full filling of the scales structures with water. The natural mechanism shows the way to produce a very efficient hygrochromic material: a medium which significantly changes color when its water contents are modified.

  15. Ureotelism is inducible in the neotropical freshwater Hoplias malabaricus (Teleostei, Erythrinidae

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    G. Moraes

    Full Text Available Increased environmental pH decreases ammonia transport through the gills, impairing nitrogenous waste. The consequent toxicity is usually drastic to most fishes. A few species are able to synthesize urea as a way to detoxify plasma ammonia. We studied three teleosts of the family Erythrinidae living in distinct environments, and assumed the biochemical behaviors would be different in spite of their being closely related species. Adult fish collected in the wild were submitted to alkaline water and the urea excretion rate was determined. The specific activity of urea cycle enzymes was determined in liver samples of fish from neutral waters. The studied species Hoplias lacerdae, Hoplerithrynus unitaeniatus, and Hoplias malabaricus are ureogenic. Urea synthesis is not a metabolic way to detoxify ammonia in H. lacerdae and Hoplerithrynus unitaeniatus exposed to an alkaline environment. The plasma ammonia profile of both species showed two distinct biochemical responses. Urea excretion of H. malabaricus was high in alkaline water, and the transition to ureotelism is proposed. The nitrogen excretion rate of H. malabaricus was among the highest values reported and the high urea excretion leads us to include this species as ureotelic in alkaline water.

  16. Una nueva especie ecuatoriana del género de peces andinos Grundulus (Characiformes: Characidae

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    César Román-Valencia

    2005-09-01

    Full Text Available Se describe Grundulus quitoensis nueva especie (Characiformes, Characidae proveniente de las Lagunas El Voladero reserva biológica El Angel al norte de Ecuador. El nuevo taxon se distingue de las demás especies por el menor número de radios simples en la aleta anal (tres vs. cuatro a cinco y en las aletas pectorales (uno vs. dos a tres, por el mayor número de dientes en cada dentario (12- 14 vs. 8-10, perfil ventral posterior a la cintura pectoral hasta el origen de la aleta anal plano (vs. curvo, el segundo infraorbital es tres veces más grande que el primero (vs. dos veces más grande, el tercer infraorbital está separado del preopérculo (vs. en contacto con la superficie del preopérculo, dentario presenta cuatro pequeñas fenestras en el margen infero-lateral (vs. uno a dos, el premaxilar presenta un proceso lateral largo (vs. corto, maxilar con dos muescas en la superficie infero-lateral (vs. maxilar con una muesca en la superficie inferolateral.A new Ecuadorian species of the Andean fish genus Grundulus (Characiformes: Characidae. The new species Grundulus quitoensis is described from El Voladero Lake, El Angel Biological Reserve, Northern Ecuador. The new taxon can be distinguished from all congeners by the following characters, respectively: a low number of unbranched rays in the anal fin (three vs. four-five and in pectoral fins (on vs. two - three, a higher number of dentary teeth (12-14 vs. 8-10, a second infraorbital about three times larger than the first (vs. about two times larger, a third infraorbital which is not in contact with the preopercle (vs. in contact with preopercle, the presence of four small fenestrae in the infero-lateral bone dentary (vs. one - two; and a premaxilla which presents a long lateral process (vs. short, a maxilla with two notches in the infero-lateral surface (vs. one notch in the infero-lateral surface. Rev. Biol. Trop. 53(3-4: 537-544. Epub 2005 Oct 3.

  17. Different foods in larvicultura of traíra (Hoplias malabaricus

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    Samuel Louzada Pereira

    2015-10-01

    Full Text Available ABSTRACT. Pereira S.L., Mendonça P.P., Pellanda A.S., Matielo M.D. & Gon- çalves Junior L.P. [Different foods in larvicultura of traíra (Hoplias malabaricus.] Utilização de diferentes alimentos na larvicultura de traíra (Hoplias malabaricus. Revista Brasileira de Medicina Veterinária, 37(3:233-238, 2015. Universidade Estadual do Norte Fluminense Darcy Ribeiro, Avenida Alberto Lamego, 2000, Parque Califórnia, Campos dos Goytacazes, RJ 28013-602, Brasil. E-mail: samuell_lp@hotmail.com The feeding in the larviculture of species carnivorous view point for closing of the technological packages of rearing culture. Developed in the sector of Aquicultura of the IFES - Campus of Alegre, this work it aimed at to compare the performance with four diet feed as first exogenous feeding for traíra (Hoplias malabaricus, parameters evaluated: Survival, length final (CF, final weight (PF, tax of specific growth (TCE, development tax specifies (TDE, being put in container with fifteen liters of water, with constant aeration, have five larva of traíra/container. The delineation entire was aleatory with four treatments and five repetitions. Being the diet feeds represented for T1: Nauplios de Artemia sp.; T2: microworm of oats (Pannagrelos redivivus; T3: Wild Zooplâncton; e the inert food represented by T4: Commercial ration in dust with 55% of crude protein and 4,200 Kcal de ED/kg of ration. The water exchange was of 80% daily, the average temperature was of 27.5±1°C. The indices of survival in the T1, T2, T3 and T4, had been 84%, 72%, 100% and 92%, respectively. The date had been submitted analyze it statistics ANOVA and test of Tukey (P<0.01. Wild Zooplâncton was biggest CTF, PF, GP, TCE and TDE. Did not have difference statistics between the Artemia sp. the ration for TCE and TDE. The microworm of oats was minor CF, PF, TCE and TDE. The treatment Wild zooplankton (T3 showed optimum diet food among the other diet feeds tested for the development and

  18. A new sympatric region for distinct karyotypic forms of Hoplias malabaricus (Pisces, Erythrinidae

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    G. G. Born

    Full Text Available Specimens of Hoplias malabaricus from Lagoa Carioca, an isolated lake of the Rio Doce State Park (state of Minas Gerais, Brazil, were cytogenetically studied. The diploid number was found to be constant, i.e., 2n = 42 chromosomes, although two karyotypic forms were found: karyotype A, characterized by 22M + 20SM chromosomes, observed only in a male specimen, and karyotype B, characterized by 24M + 16SM + 2ST and 24M + 17SM + 1ST chromosomes in female and male specimens, respectively. This sex difference found in karyotype B is related to an XX/XY sex chromosome system. Another female specimen of H. malabaricus, also carrying karyotype A, had previously been found in the same lake. The available data indicate that two sympatric cytotypes of H. malabaricus exist in the Lagoa Carioca, with cytotype A occurring at a lower frequency and differing from cytotype B by undifferentiated sex chromosomes.

  19. Osteology of Priocharax and remarkable developmental truncation in a miniature Amazonian fish (Teleostei: Characiformes: Characidae).

    Science.gov (United States)

    Mattox, George M T; Britz, Ralf; Toledo-Piza, Mônica

    2016-01-01

    Establishing phylogenetic relationships of miniature fishes is challenging in taxa with developmental truncation. Within the Characiformes, developmental truncation appears to be relatively rare, with the Neotropical genus Priocharax being an example. Priocharax includes three miniature species among the smallest of the order and has been hypothesized to belong to the Heterocharacinae. The pronounced reduction in its skeleton, however, prevented a clearer evaluation of its relationships. The present detailed osteological study was designed to address this question and revealed that 21 bones are absent and nine other skeletal structures are simplified in Priocharax when compared to other characids. Comparison of the skeleton of adult Priocharax with early developmental stages of other characids demonstrated that most of the absences and simplifications can be interpreted as developmental truncations. The most striking developmental truncations are in the pectoral girdle, in which the endoskeleton remains entirely cartilaginous. Other interesting truncations are in the ethmoid region of the skull, infraorbital series, and Weberian apparatus, in which the claustrum is absent. Our study also revealed some unusual sexual dimorphisms in the pelvic girdle. Two cladistic analyses were performed to assess the relationships of Priocharax within the Heterocharacinae. The first consisted of a traditional analysis in which all absences and reductions of Priocharax were coded in the same way as in the remaining taxa. This resulted in three equally most parsimonious topologies, all of which have Priocharax as the most basal taxon of the Heterocharacinae. The second analysis incorporated ontogenetic information, and most absences and reductions of Priocharax were reinterpreted as apomorphic conditions and thus, coded differently from similar conditions in outgroups. This resulted in a single phylogenetic hypothesis with Priocharax and Gnathocharax as sister groups based on seven

  20. First Chromosomal Analysis in Hepsetidae (Actinopterygii, Characiformes: Insights into Relationship between African and Neotropical Fish Groups

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    Pedro C. Carvalho

    2017-12-01

    Full Text Available Hepsetidae is a small fish family with only the genus Hepsetus, with six described species distributed throughout the South, Central and Western regions of Africa, showing a close relationship with the Alestidae and some Neotropical fish families. However, no cytogenetic information is available for both Hepsetidae and Alestidae species, thus preventing any evolutionary comparative studies at the chromosomal level. In the present study, we are providing new cytogenetic data for Hepsetus odoe, including the standard karyotype, C-banding, repetitive DNAs mapping, comparative genomic hybridization (CGH and whole chromosome painting (WCP, providing chromosomal patterns and subsidies for comparative cytogenetics with other characiform families. Both males and females H. odoe have 2n = 58 chromosomes (10m + 28sm + 20st/a, with most of the C-band positive heterochromatin localized in the centromeric and subtelomeric regions. Only one pair of chromosomes bears proximal 5S rDNA sites in the short arms, contrasting with the 18S rDNA sequences which are located in the terminal regions of four chromosome pairs. Clear interstitial hybridization signals are evidenced for the U1 and U2 snDNA probes, but in only one and two chromosome pairs, respectively. Microsatellite motifs are widely distributed in the karyotype, with exception for the (CGG10, (GAA10 and (GAG10 probes, which highlight conspicuous interstitial signals on an unique pair of chromosomes. Comparative data from conventional and molecular cytogenetics, including CGH and WCP experiments, indicate that H. odoe and some Erythrinidae species, particularly Erythrinus erythrinus, share similar chromosomal sequences suggesting some relatedness among them, although bearing genomic specificities in view of their divergent evolutionary histories.

  1. Condicionamento alimentar de alevinos de trairão (Hoplias cf. lacerdae

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    Ronald Kennedy Luz

    2002-09-01

    Full Text Available Este experimento foi conduzido com o objetivo de avaliar o condicionamento alimentar de alevinos de trairão (Hoplias cf. lacerdae. Foram utilizados seis aquários com capacidade para 20 litros cada, dotados de sistema artificial de aeração, temperatura controlada (27±0,5ºC, cobertos com lona plástica preta, mantendo o ambiente interno escuro todo o tempo (0L:24E, sendo descobertos apenas para os manejos diários. Alevinos de 2,9±0,2 cm de comprimento foram estocados a uma densidade de 4 animais/L e submetidos aos seguintes tratamentos: aceitação direta de dietas artificiais e condicionamento alimentar por meio da substituição da ração semi-úmida por ração seca. Ao final do experimento, foram obtidas taxas médias de sobrevivência de 27,50 e 96,66% para o primeiro tratamento e segundo tratamentos, respectivamente, evidenciando que o condicionamento alimentar é um manejo eficiente na produção e sobrevivência de alevinos de trairão.

  2. Taxonomic revision of Galeocharax (Characiformes: Characidae: Characinae

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    Victor Giovannetti

    2017-03-01

    Full Text Available ABSTRACT The taxonomy of Galeocharax, a genus of freshwater fishes distributed in most South American cis-Andean river systems, except the rio Negro, rio São Francisco and rio Xingu basins and the eastern drainages of Brazil, is herein revised. A total of 1229 specimens were examined from which 680 had meristic and morphometric data taken. Osteological and morphological features were also examined through radiographs, scanning electron microscopy and in cleared and stained specimens. Three of the four species previously considered as valid are herein recognized: Galeocharax humeralis from rio Paraguay and lower rio Paraná basins; Galeocharax goeldii, from rio Madeira basin, with records of geographical distribution expanded to the río Madre de Dios, río Beni, rio Mamoré and rio Guaporé basins and Galeocharax gulo, which is widespread throughout rio Amazonas, río Orinoco, rio Tocantins, and upper rio Paraná basins. Galeocharax knerii is herein considered a junior synonym of Galeocharax gulo. A key to species of Galeocharax is presented.

  3. Feeding of Hoplias aff. malabaricus (Bloch, 1794 and Oligosarcus robustus Menezes, 1969 in a lagoon under estuarine influence, Pelotas, RS

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    Fabiano Corrêa

    2009-09-01

    Full Text Available The objective of the present paper was to study the diets of Hoplias aff. malabaricus and Oligosarcus robust in “Pequena Lagoon” and evaluate the importance of estuarine organisms in the feeding of freshwater fish. A total of twelve food categories were identified and it was established that the fish resource was the most frequent in the diet of both species. Euryhaline fish such as Mugil platanus mullets and Odontesthes argentinensis silversides were common items in the diets of these two species, which included not only freshwater fish but also euryhaline fish from the adjacent estuarine zone, integrating both resources in the food chain.

  4. Biogeographic analysis of the characiformes fishes of Venezuela

    International Nuclear Information System (INIS)

    Bonilla Rivero, Ana; Lopez Rojas, Hector

    2013-01-01

    Based on the information available on fishes of the order characiforms of Venezuela a biogeographical analysis was performed to explore the relative importance of the processes that may have contributed to the establishment of current distribution patterns of the Venezuelan continental ichthyofauna. Geographic and phylogenetic information available for this group of fishes was analyzed by parsimony analysis of endemicity (PAE) and brooks parsimony analysis (BPA). PAE uncovered the western plains and southern Amazonas as areas of endemism. BPA, using the phylogenetic information of seven genera, showed a general pattern with two major clades (Caribbean + Maracaibo) and (Rio Negro + Orinoco river) + Paria + Valencia) + Cuyuni), where the proposed hypothesis highlights a dispersion event from the Rio Negro basin to the Orinoco river. The results indicate that the plains-Amazonas region, where the amazon biota mixed with that of the incipient Orinoco s biota, contains the largest species richness, areas of endemism, and well as many speciation events with posterior dispersion to other regions of Venezuela. The biota of the northern coastal region in turn seems rather governed by punctual vicariant speciation processes, which may have been conditioned by the historical isolation of the basins draining this region.

  5. EARLY ONTOGENETIC DEVELOPMENT OF Prochilodus brevis (STEINDACHNER, 1875 (CHARACIFORMES

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    Divana Eliva Oliveira Alves

    2016-03-01

    Full Text Available The study analyzed the stages of the embryonic development of the curimatã Prochilodus brevis, endemic fish of the northeast Brazilian, belonging the family Prochilodontidae (Characiformes. The embryos were obtained of the Estação de Piscicultura Estevão de Oliveira (DNOCS – Caicó, RN, Brazil. The collections were accomplished after the beginning of the spawning and fertilization of the oocytes, in intervals of one hour to the appearance of the larvae. The samples were fixed in 10% formaldehyde for morphological analysis and in Bouin's solution during a period of twelve hours, after they were processed through routine histological techniques. The eggs of P. brevis are spherical, transparent and non-adhesive. The main events reported during embryogenesis were: zygote, cleavage, morula, blastula, gastrula, organogenesis, hatching and larvae. These events are common to several species of teleost fish, the variation found are related to the chronology of each phase and the specific characteristics of oocytes and eggs. The characterization of the embryonic development of fish such as P. brevis, it is essential to suit the growing conditions to the biological needs of these animals. The data from this study agree with studies of species endemic to the northeastern region and expand the possibilities for their cultivation. Keywords: Embryogenesis; reproduction; aquaculture; developmental biology; curimatã.

  6. The complete mitochondrial genome sequence of Colossoma macropomum (Characiformes: Serrasalmidae).

    Science.gov (United States)

    Wu, Yu-Peng; Xie, Jing-Fang; He, Qiu-Sheng; Xie, Jian-Lin

    2016-11-01

    Colossoma macropomum (Cuvier, 1816) is the largest characin of South America. This species and its congeners mainly feed on zooplankton, insects, snails and decaying plants. In this paper, we sequenced and annotated the complete mitogenome of C. macropomum. The total length is 16,703 bp, and it typically consist of 37 genes, including 13 protein-coding genes, two rRNAs, 22 tRNA, a light-strand replication origin (O L ) and a large control region (D-loop). The overall base composition is 29.9%, 24.6%, 29.5% and 15.9% for A, T, C and G, respectively, with a slight bias on AT content (54.6%). All protein-coding genes share the start codon ATG, except for COI, which begins with GTG. Most of them have TAA or TAG as the stop codon, except COII, ND4 use AGA and COI, Cytb use an incomplete stop codon T. This information could provide useful molecular data and contribute to further phylogenetic studies of Characiformes and Serrasalmidae.

  7. Nucleotide diversity of Hemigrammus cf. marginatus (Characiformes, Characidae in the upper Paraná river floodplain - doi: 10.4025/actascibiolsci.v34i3.6669

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    Carla Simone Pavanelli

    2012-06-01

    Full Text Available Characidae is the largest and more diversified family from Characiformes and presents several classification problems, with several genera currently allocated as incertae sedis, such as the genus Hemigrammus. The upper Paraná river floodplain is an environment with high fish diversity. There is at least one species of Hemigrammus, however there are divergences among some authors about the number and the identification of the species from this genus. Therefore the goal of this study was to characterize, using a molecular approach, individuals of Hemigrammus from the upper Paraná river floodplain and to compare them with individuals from the type locality of Hemigrammus marginatus, since this is the only species distributed in this floodplain. For this, the DNA was extracted and a partial region from the mitochondrial genes ATPase 6 and ATPase 8 were amplified and sequenced. The results evidenced the existence of two species of Hemigrammus in the floodplain, although impossible to be distinguished only through morphological traits. High nucleotide diversity among individuals from the upper Paraná river in relation to those from the type locality was also observed, indicating that both species of Hemigrammus present in the upper Paraná river floodplain are not Hemigrammus marginatus. 

  8. Phylogenetic relationships within the speciose family Characidae (Teleostei: Ostariophysi: Characiformes based on multilocus analysis and extensive ingroup sampling

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    Vari Richard P

    2011-09-01

    Full Text Available Abstract Background With nearly 1,100 species, the fish family Characidae represents more than half of the species of Characiformes, and is a key component of Neotropical freshwater ecosystems. The composition, phylogeny, and classification of Characidae is currently uncertain, despite significant efforts based on analysis of morphological and molecular data. No consensus about the monophyly of this group or its position within the order Characiformes has been reached, challenged by the fact that many key studies to date have non-overlapping taxonomic representation and focus only on subsets of this diversity. Results In the present study we propose a new definition of the family Characidae and a hypothesis of relationships for the Characiformes based on phylogenetic analysis of DNA sequences of two mitochondrial and three nuclear genes (4,680 base pairs. The sequences were obtained from 211 samples representing 166 genera distributed among all 18 recognized families in the order Characiformes, all 14 recognized subfamilies in the Characidae, plus 56 of the genera so far considered incertae sedis in the Characidae. The phylogeny obtained is robust, with most lineages significantly supported by posterior probabilities in Bayesian analysis, and high bootstrap values from maximum likelihood and parsimony analyses. Conclusion A monophyletic assemblage strongly supported in all our phylogenetic analysis is herein defined as the Characidae and includes the characiform species lacking a supraorbital bone and with a derived position of the emergence of the hyoid artery from the anterior ceratohyal. To recognize this and several other monophyletic groups within characiforms we propose changes in the limits of several families to facilitate future studies in the Characiformes and particularly the Characidae. This work presents a new phylogenetic framework for a speciose and morphologically diverse group of freshwater fishes of significant ecological and

  9. Phylogenetic relationships within the speciose family Characidae (Teleostei: Ostariophysi: Characiformes) based on multilocus analysis and extensive ingroup sampling.

    Science.gov (United States)

    Oliveira, Claudio; Avelino, Gleisy S; Abe, Kelly T; Mariguela, Tatiane C; Benine, Ricardo C; Ortí, Guillermo; Vari, Richard P; Corrêa e Castro, Ricardo M

    2011-09-26

    With nearly 1,100 species, the fish family Characidae represents more than half of the species of Characiformes, and is a key component of Neotropical freshwater ecosystems. The composition, phylogeny, and classification of Characidae is currently uncertain, despite significant efforts based on analysis of morphological and molecular data. No consensus about the monophyly of this group or its position within the order Characiformes has been reached, challenged by the fact that many key studies to date have non-overlapping taxonomic representation and focus only on subsets of this diversity. In the present study we propose a new definition of the family Characidae and a hypothesis of relationships for the Characiformes based on phylogenetic analysis of DNA sequences of two mitochondrial and three nuclear genes (4,680 base pairs). The sequences were obtained from 211 samples representing 166 genera distributed among all 18 recognized families in the order Characiformes, all 14 recognized subfamilies in the Characidae, plus 56 of the genera so far considered incertae sedis in the Characidae. The phylogeny obtained is robust, with most lineages significantly supported by posterior probabilities in Bayesian analysis, and high bootstrap values from maximum likelihood and parsimony analyses. A monophyletic assemblage strongly supported in all our phylogenetic analysis is herein defined as the Characidae and includes the characiform species lacking a supraorbital bone and with a derived position of the emergence of the hyoid artery from the anterior ceratohyal. To recognize this and several other monophyletic groups within characiforms we propose changes in the limits of several families to facilitate future studies in the Characiformes and particularly the Characidae. This work presents a new phylogenetic framework for a speciose and morphologically diverse group of freshwater fishes of significant ecological and evolutionary importance across the Neotropics and portions

  10. Larvas de nematóides de importância zoonótica encontradas em traíras (Hoplias malabaricus bloch, 1794 no município de Santo Antonio do Leverger, MT Nematode larvae with zoonotical importance found in trairas (Hoplias malabaricus in Santo Antonio do Leverger, Mato Grosso, Brazil

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    L.A. Barros

    2007-04-01

    Full Text Available In order to investigate the prevalence of nematode larvae with zoonotical importance in trairas (Hoplias malabaricus, necropsy exams were done 30 specimes from Santo Antonio do Leverger, Mato Grosso, Brazil. These fishes were collected during drought time and two different nematodes larvae were found - Contracaecum sp. and Eustrongylides sp. - presenting the following prevalence: Contracaecum sp., 73% and Eustrongylides sp., 33%.

  11. Acute intraperitoneal mercury chloride contamination and distribution in liver, muscle and gill of a neotropical fish Hoplias malabaricus (BLOCK, 1794

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    Taise Bomfim de Jesus

    2011-04-01

    Full Text Available The present study investigated with the distribution of mercury chloride in muscle, liver and gills of Hoplias malabaricus contaminated through intraperitoneal injection (6 µg in 0.1mL of PBS for a period of 24, 48, 72 and 96h. The liver, gill and muscle were analyzed for mercury content in an ICP/AES (Varian Liberty II with vapor generating accessory (VGA 77. The muscle and liver tissues presented the same contamination pattern increasing concentrations in 24 h of exposure with a decrease in Hg concentration with 72 h and a new increase in Hg concentrations with 96 h of exposure. The Hg concentrations in contaminated organisms were always higher than the control although only for liver samples the difference was statistically significant. Liver samples always presented higher Hg contents when compared with gill and muscle samples.

  12. Effects of water-soluble fraction of petroleum on growth and prey consumption of juvenile Hoplias aff. malabaricus (Osteichthyes: Erythrinidae).

    Science.gov (United States)

    Santos, R M; Weber, L; Souza, V L; Soares, A R; Petry, A C

    2016-02-01

    The influence of the water-soluble fraction of petroleum (WSF) on prey consumption and growth of juvenile trahira Hoplias aff. malabaricus was investigated. Juveniles were submitted to either WSF or Control treatment over 28 days, and jewel tetra Hyphessobrycon eques adults were offered daily as prey for each predator. Total prey consumption ranged from 16 to 86 individuals. Despite the initially lower prey consumption under WSF exposure, there were no significant differences in overall feeding rates between the two treatments. Water-soluble fraction of petroleum had a negative effect on the growth in length of H. aff. malabaricus juveniles. Although unaffected, prey consumption suggested a relative resistance in H. aff. malabaricus to WSF exposition and the lower growth of individuals exposed to WSF than the Control possibly reflects metabolic costs. The implications of the main findings for the individual and the food chain are discussed, including behavioral aspects and the role played by this predator in shallow aquatic systems.

  13. Bio-inspired approach of the fluorescence emission properties in the scarabaeid beetle Hoplia coerulea (Coleoptera): Modeling by transfer-matrix optical simulations

    Science.gov (United States)

    Van Hooijdonk, Eloise; Berthier, Serge; Vigneron, Jean-Pol

    2012-12-01

    Scales of the scarabaeid beetle Hoplia coerulea (Coleoptera) contain fluorescent molecules embedded in a multilayer structure. The consequence of this source confinement is a modification of the fluorescence properties, i.e., an enhancement or inhibition of the emission of certain wavelengths. In this work, we propose a bio-inspired approach to this problem. In other words, we use numerical simulations based on the one-dimensional transfer-matrix formalism to investigate the influence of a Hoplia-like system on emission characteristics and, from the results, we deduce potential technical applications. We reveal that depending on the choice of some parameters (layer thickness, dielectric constant, and position of the emitting source in the structure), it is possible to enhance or inhibit the fluorescence emission for certain wavelengths. This observation could be of great interest to design new optical devices in the field of optoelectronic, solar cells, biosensors, etc.

  14. Contracaecum sp (ANISAKIDAE EN EL PEZ Hoplias malabaricus, CAPTURADO EN LA CIÉNAGA GRANDE DE LORICA, CÓRDOBA

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    Sandra Pardo C

    2008-08-01

    Full Text Available Objective. To determine the presence of Contracaecum nematodes in the fish Hoplias malabaricus (moncholo. Materials and methods. A total of 45 fish, captured between July. 2006 and May, 2007 were sampled. In the laboratory, biometric analysis was done on each fish; the fish was gutted and examined for nematodes. Skeletal musculature was extracted, dissected in thin layers and observed with ultraviolet light to evaluate the presence of nematodes. Nematodes were counted, isolated and fixed in formaldehyde. Nematodes tissues were cleared in order to visualize their internal structures, and morphometric keys were used to confirm their identification. Results. Nematodes were found only in viscera and identified as Contracaecum spp in the third larval state (L3. Prevalence was 100% with light (88.9% and moderate (11.1% infestation. The condition factor value was 0.036±0.04, the hepatosomatic, branchiasomatic and somatic spleen indices were 1.65±0.37, 3.40±0.43, 0.09±0.04, respectively. There was no significant relationship between these indices and the parasite index (r0.05. Conclusions. Moncholo sampled from Ciénaga Grande de Lorica were infected with Contracaecum spp. The condition factor index and the somatic organ indices were not significant predictors of infection.

  15. Amino acids and carbohydrates absorption by Na+-dependent transporters in the pyloric ceca of Hoplias malabaricus (Erythrinidae

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    Vieira Vania Lucia Pimentel

    2001-01-01

    Full Text Available Information about amino acids and carbohydrate absorption in fish is important to formulate an adequate diet to obtain optimal growth. Therefore, the objective of this study was to investigate if Na+-dependent transporters are involved on the absorption of glycine, L-glutamine, L-leucine, L-lysine, L-proline, L-alanine, and the carbohydrates fructose and glucose in the pyloric ceca of Hoplias malabaricus. The pyloric ceca were mounted in a system of continuous perfusion "in vitro". Amino acids and carbohydrates were placed on the mucosal side at concentrations of 10, 20, and 40mM. The serosal side of the pyloric ceca was positive in relation to the mucosal side. The addition of glycine, L-glutamine, L-leucine, L-lysine, L-proline (all tested concentrations, and glucose (at concentrations of 20 and 40mM increased the positivity of the serosal side, indicating the presence of Na+-dependent transporters in the absorption of these substances. L-alanine and fructose did not change the positivity of the serosal side. The pyloric ceca seem to be the main site of nutrient absorption in the digestive tract of H. malabaricus.

  16. Seasonal pattern in parasite infracommunities of Hoplerythrinus unitaeniatus and Hoplias malabaricus (Actinopterygii: Erythrinidae) from the Brazilian Amazon.

    Science.gov (United States)

    Gonçalves, Raissa Alves; Oliveira, Marcos Sidney Brito; Neves, Ligia Rigôr; Tavares-Dias, Marcos

    2016-01-01

    The present study investigated the effects of seasonal variation in parasites infracommunities of Hoplerythrinus unitaeniatus and Hoplias malabaricus from a tributary of Amazon River. For H. unitaeniatus and H. malabaricus, 11 parasite species were similar, and greatest parasite richness occurred during the rainy season. Ichthyophthirius multifiliis was the dominant parasite species for both hosts. In H. unitaeniatus, infection by Whittingtonocotyle caetei, Whittingtonocotyle jeju, Urocleidoides sp. and Anacanthorus sp. was higher during rainy season. Contracaecum sp., Procamallanus (Spirocamallanus) inopinatus, Nomimoscolex matogrossensis and Gorytocephalus spectabilis showed no seasonal pattern. For H. unitaeniatus, P. pillulare, Clinostomum marginatum and Argulus pestifer occurred only during dry season, while Trichodina sp., Dolops geayi, undetermined metacercariae and Posthodiplostomum sp. occurred only during the rainy season. In H. malabaricus, the prevalence of Urocleidoides eremitus was similar during the two seasons, but abundance was higher during the rainy season. Tetrahymena sp., C. marginatum, Dendrorchis neivai, undetermined metacercariae, Posthodiplostomum sp., Genarchella genarchella, Cystidicoloides sp., G. spectabilis, D. geayi, A. pestifer and Glossiphonidae gen. sp. occurred only during the dry season. However, Contracaecum sp. and P. (S.) inopinatus occurred during both seasons, but the prevalence of P. (S.) inopinatus was higher during the rainy season. Seasonal variation in this infection levels was due to the host's feeding behavior and habits and the availability of infectious forms of parasites with heteroxenic life cycles. The non-seasonal fluctuation detected are likely a result of the parasites biology, highly variable nature of this tributary of Amazon River and low abundance of parasites.

  17. Diferentes densidades de estocagem na produção de alevinos de trairão (Hoplias cf. lacerdae Effect of two stocking rates on the trairão (Hoplias cf. lacerdae fingerlings performance

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    Ana Lúcia Salaro

    2003-10-01

    Full Text Available Alevinos de trairão (Hoplias cf. lacerdae, com peso e comprimento total médios de 12,52 g e 10,5 cm, respectivamente, previamente condicionados ao aceite de dietas artificiais, foram distribuídos em seis tanques de alvenaria (5m² nas densidades de: 1 e 4 alevinos/m². Os peixes dos diferentes tratamentos foram alimentados ad libitum nos horários de 8 e 14 h com ração comercial extrusada contendo 42% de proteína bruta. A cada trinta dias realizou-se a troca do volume total de água de todos os tanques. Ao final do experimento (120 dias foi avaliado o desempenho produtivo dos peixes, por meio da taxa de sobrevivência, conversão alimentar, ganhos em comprimento e em peso diário. Foram observadas taxas médias de sobrevivência de 86,7 e 96,7% para as densidades de 1 e 4 peixes/m², respectivamente. A conversão alimentar foi de 1,6 e 1,2; o ganho em peso diário e em comprimento de 0,70 e 0,38 g e 8,01 e 7,27 cm, respectivamente. Estes valores não diferiram entre si. Com os resultados obtidos pode-se concluir que as densidades de estocagem de 1 e 4 peixes/m² podem ser utilizadas no cultivo de alevinos de trairão sem que haja comprometimento no seu desempenho produtivo.Trairão (Hoplias cf. lacerdae fingerlings, averaging 12.52 g and 10.5 cm, respectively, previously trained to accept artificial feed, were stocked in six tanks (5 m², under two stocking rates: 1 and 4 fingerling/m², constituting the treatments t1 and t2, respectively. The fishes of the different treatments were ad libitum fed an extruded commercial diet containing 42% crude protein, at 8 a.m. and 2 p.m. at each 30 days, the water volume of all tanks was 100% replaced. at the end of the experiment, 120 days, the fishes productive performance was evaluated by means of survival rate, feed:gain ratio and daily length and weight gains. average survival rates of 86.7 and 96.7% were observed for the stocking rates of 1 and 4 fish/m², respectively. feed:gain ratio of 1.6 and

  18. Blood parameter analysis and morphological alterations as biomarkers on the health of Hoplias malabaricus and Geophagus brasiliensis

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    Silvia Romão

    2006-05-01

    Full Text Available This study aimed to assess the influence of the environment on fish health. Samples of Hoplias malabaricus and Geophagus brasiliensis, were collected from three different environments: area I was urban and areas II and III were rural. Analyses of red blood cell count, microhematocrit, hemoglobin concentration, white blood cell count and differential white cell count in blood smear were carried out. Mean corpuscular volume and mean corpuscular hemoglobin concentration were calculated. To analyze morphological alterations, gills, liver, kidney and gonads were submitted to routine histological processing. Individuals collected from area III had slightly lower blood indices than collected from area I . Severe kidney changes, degeneration of and crystallization within kidney tubules were observed. In area I, crystallization was observed in 92% of the specimens of G. brasiliensis. These results suggested that such alterations were related with poor water circulation in the place.Este trabalho teve como objetivo avaliar a influência do ambiente sobre a higidez dos peixes. Animais, das espécies Hoplias malabaricus e Geophagus brasiliensis foram coletados em três ambientes distintos, sendo ambiente I região urbana e ambientes II e III em região rural. Foram realizadas análises do número total de eritrócitos por microlitro de sangue, microhematócrito, taxa de hemoglobina, porcentagem de leucócito e contagem diferencial de leucócitos em extensão sanguínea. Calcularam-se os índices hematimétricos absolutos: volume corpuscular médio e concentração de hemoglobina corpuscular média. Para análises das alterações morfológicas, brânquias, fígado, gônadas e rim seguiram processamento histológico de rotina. Foram observados índices hematológicos ligeiramente menores em indivíduos coletados no ambiente III em relação aos animais coletados no ambiente I. As análises histológicas de brânquias, fígado e gônadas das espécies G

  19. Hematological findings in neotropical fish Hoplias malabaricus exposed to subchronic and dietary doses of methylmercury, inorganic lead, and tributyltin chloride

    International Nuclear Information System (INIS)

    Oliveira Ribeiro, C.A.; Filipak Neto, F.; Mela, M.; Silva, P.H.; Randi, M.A.F.; Rabitto, I.S.; Alves Costa, J.R.M.; Pelletier, E.

    2006-01-01

    Hematological indices are gaining general acceptance as valuable tools in monitoring various aspects the health of fish exposed to contaminants. In this work some effects of methyl mercury (MeHg), inorganic lead (Pb 2+ ), and tributyltin (TBT) in a tropical fish species were evaluated by hematological methods after a trophic exposition at a subchronic level. Forty-two mature individuals of the freshwater top predator fish Hoplias malabaricus were exposed to trophic doses (each 5 days) of MeHg (0.075 μg g -1 ), Pb 2+ (21 μg g -1 ), and TBT (0.3 μg g -1 ) using young fish Astyanax sp. as prey vehicle. After 14 successive doses over 70 days, blood was sampled from exposed and control groups to evaluate hematological effects of metals on erythrocytes, total leukocytes and differential leukocytes counts, hematocrit, hemoglobin concentration, and red blood cell indices mean corpuscular volume (MCV), mean corpuscular hemoglobin (MCH), and mean corpuscular hemoglobin concentration (MCHC). Transmission electron microscopy and image analysis of erythrocytes were also used to investigate some morphometric parameters. Results show no significant effects in MCH and MCHC for all tested metals, but differences were found in erythrocytes, hemoglobin, hematocrit, MCV, and white blood cells counts. The number of leukocytes was increased in the presence of MeHg, suggesting effects on the immune system. Also the MCV increased in individuals exposed to MeHg. No ultrastructural damages were observed in red blood cells but the image analysis using light microscopy revealed differences in area, elongation, and roundness of erythrocytes from individuals exposed to Pb 2+ and TBT but not in the group exposed to MeHg. The present work shows that changes in hematological and blood indices could highlight some barely detectable metal effects in fish after laboratory exposure to contaminated food, but their application in field biomonitoring using H. malabaricus will need more detailed

  20. Effects of mercury intoxication on the response of horizontal cells of the retina of thraira fish (Hoplias malabaricus

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    C.L. Tanan

    2006-07-01

    Full Text Available Methyl mercury (MeHg is highly neurotoxic, affecting visual function in addition to other central nervous system functions. The effect of mercury intoxication on the amplitude of horizontal cell responses to light was studied in the retina of the fish Hoplias malabaricus. Intracellular responses were recorded from horizontal cells of fish previously intoxicated with MeHg by intraperitoneal injection (IP group or by trophic exposure (T group. Only one retina per fish was used. The doses of MeHg chloride administered to the IP group were 0.01, 0.05, 0.1, 1.0, 2.0, and 6.0 mg/kg. The amplitudes of the horizontal cell responses were lower than control in individuals exposed to 0.01 (N = 4 retinas, 0.05 (N = 2 retinas and 0.1 mg/kg (N = 1 retina, whereas no responses were recorded in the 1.0, 2.0, and 6.0 mg/kg groups. T group individuals were fed young specimens of Astyanax sp previously injected with MeHg corresponding to 0.75 (N = 1 retina, 0.075 (N = 8 retinas or 0.0075 (N = 4 retinas mg/kg fish body weight. After 14 doses, one every 5 days, the amplitude of the horizontal cell response was higher than control in individuals exposed to 0.075 and 0.0075 mg/kg, and lower in individuals exposed to 0.75 mg/kg. We conclude that intoxication with MeHg affects the electrophysiological response of the horizontal cells in the retina, either reducing or increasing its amplitude compared to control, and that these effects are related to the dose and/or to the mode of administration.

  1. The Stable Concordance Genus

    OpenAIRE

    Kearney, M. Kate

    2013-01-01

    The concordance genus of a knot is the least genus of any knot in its concordance class. Although difficult to compute, it is a useful invariant that highlights the distinction between the three-genus and four-genus. In this paper we define and discuss the stable concordance genus of a knot, which describes the behavior of the concordance genus under connected sum.

  2. New species of Tereancistrum (Dactylogyridae monogenean parasites of Schizodon borellii (Characiformes, Anostomidae from Brazil, and emended diagnosis for T. parvus

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    Letícia Cucolo Karling

    2014-08-01

    Full Text Available Tereancistrum paranaensis sp. n. is described from the gills of Schizodon borellii (Boulenger 1900 (Characiformes from the upper Paraná river floodplain, Brazil. The new species is mainly characterized by morphology of copulatory complex, dorsal anchor with shaft recurved and pointed and arc-shaped dorsal bar. Tereancistrum parvus was described based on only one specimen and some characteristics were not observed. Now we provide an emendation to the diagnosis of this species.

  3. Cytogenetic characterization of Hoplias malabaricus (Bloch, 1794 from the Ctalamochita River (Córdoba, Argentina: first evidence for southernmost populations of this species complex and comments on its biogeography

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    Diego Javier Grassi

    2017-01-01

    Full Text Available Hoplias malabaricus (Bloch, 1794, a predatory freshwater fish with a wide distribution throughout South America, represents a species complex with seven well characterized karyomorphs at the cytogenetic level. Although this species has been extensively studied in several Brazilian basins, data are still scarce for hydrographic systems from other South American countries. This study aims to characterize cytogenetically the Hoplias malabaricus populations from the Argentinean Central Region, close to the southernmost distribution of this species complex. A total of 32 specimens from the Ctalamochita River, a tributary of Lower Paraná Basin located in the province of Córdoba, were analyzed using cytogenetic techniques (Giemsa staining, C- and Ag-NOR banding and fluorescent in situ hybridization with 18S rDNA. All the specimens showed diploid number 2n=42, chromosomic formula 22m + 20sm and absence of sexual chromosomes. Thus, the analyzed populations belong to the karyomorph named A. These populations showed a remarkable degree of divergence in their cytogenetic traits such as karyotypic formula, C-banding, NORs and 18S rDNA patterns for Hoplias malabaricus from other populations bearing the same karyomorph in the Middle and Upper Paraná Basin. These findings are consistent with molecular data from a recent study (where specimens collected in the present work were included, which indicate a closer phylogenetic relationship of Hoplias malabaricus populations from the Ctalamochita River with those from the Uruguay basin and the coastal regions of South Brazil than with populations from the Middle and Upper Paraná Basin. Overall, these pieces of evidence highlight the distinctive features of Hoplias malabaricus from the Ctalamochita River, and also reveal a complex history of dispersion of these populations. The present work is the first to provide cytogenetic information and include some phylogeographic aspects of Hoplias malabaricus populations

  4. Short-term cold storage of sperm from six neotropical characiformes fishes

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    Simone Marques

    2004-09-01

    Full Text Available Sperm of the following Neotropical Characiformes fish species were tested for cold storage: Brycon lundii, Piaractus mesopotamicus, Leporinus elongatus, Leporinus friderici, Prochilodus lineatus and Prochilodus marggravii. Each sperm sample was split into two aliquots. The first was placed into a plastic bag with air or oxygen and the second, in a plastic tube with air. The samples were maintained at temperatures between 1.7-4.9 ºC. The rate of sperm motility was estimated using a 50 mM NaCl solution as the activating solution. The shortest sperm storage duration (7 h was recorded for L. friderici, when the sperm motility rate reached ~ 30%, whereas the longest duration (20 h was obtained with the sperm of P. lineatus. A fertilisation test using Prochilodus marggravii sperm refrigerated for 8 h yielded 88-90% of viable embryos. The refrigerated storage method could be of practical applications, especially in fish reproductive management at hatchery stations.O sêmen das seguintes espécies de Characiformes neotropicais foi testado para armazenamento em ambiente resfriado: Brycon lundii, Piaractus mesopotamicus, Leporinus elongatus, Leporinus friderici, Prochilodus lineatus e Prochilodus marggravii. Amostras de sêmen, obtidas por massagem da parede celômica, foram armazenadas em saco plástico com ar ou oxigênio ou em tubo plástico com ar, e mantidas resfriadas entre 1,7-4,9º C. A taxa de motilidade espermática foi estimada usando-se NaCl 50 mM como solução ativadora. O sêmen com menor duração de viabilidade (7 h foi o de L. friderici, quando a taxa de motilidade espermática alcançou ~30%, enquanto que o de maior duração (20 h foi o de P. lineatus. A fertilização de ovócitos utilizando sêmen refrigerado por 8 h de Prochilodus marggravii produziu 88-90% de embriões viáveis. O método de armazenamento desenvolvido neste trabalho tem aplicações práticas, especialmente no manejo reprodutivo de peixes em estações de

  5. Restriction site heteroplasmy in the mitochondrial DNA of Brycon opalinus (Cuvier, 1819 (Characiformes, Characidae, Bryconiae

    Directory of Open Access Journals (Sweden)

    A.W.S. Hilsdorf

    2004-03-01

    Full Text Available Homoplasmy is a feature usually found in the mtDNA of higher animal taxa. On the other hand, the presence of two classes of mtDNA in the same cell or organism is rare and may appear in length or site variation. Data from mtDNA RFLP analysis of Brycon opalinus populations (Cuvier, 1819; Characiformes, Characidae, Bryconinae revealed site heteroplasmy from endonuclease NheI digestion. Southern blotting hybridization was used to survey a total of 257 specimens with 24 restriction enzymes. Three different restriction fragment patterns of mtDNA were obtained from NheI digestion. Two individuals from hatchery broodstock were found to have two of them. NheI digests of heteroplasmic individuals yielded two fragments of approximately 1180 and 1260 bp. Despite the low frequency of this type of heteroplasmy in the whole B. opalinus population, the presence of site heteroplasmy in this species supports the evidence of this phenomenon in lower vertebrate groups.

  6. The genus Bipolaris

    NARCIS (Netherlands)

    Manamgoda, D.S.; Rossman, A.Y.; Castlebury, L.A.; Crous, P.W.; Madrid, H.; Chukeatirote, E.; Hyde, K.D.

    2014-01-01

    The genus Bipolaris includes important plant pathogens with worldwide distribution. Species recognition in the genus has been uncertain due to the lack of molecular data from ex-type cultures as well as overlapping morphological characteristics. In this study, we revise the genus Bipolaris based on

  7. Biogeography and comparative cytogenetics between two populations of Hoplias malabaricus (Bloch, 1794 (Ostariophysi: Erythrinidae from coastal basins in the State of Bahia, Brazil

    Directory of Open Access Journals (Sweden)

    Uedson Pereira Jacobina

    Full Text Available The species Hoplias malabaricus is a predator fish found in nearly all cis-Andean basins. From a cytogenetic point of view, this species comprises, at least, seven differentiated karyomorphs. Several localities have been formerly analyzed in Brazil, however, some regions, such as Bahia State, remain underrepresented. Recently, the Brazilian Environment Ministry classified both Itapicuru and Contas river basins (entirely located within Bahia territory as priority conservation areas, whose biodiversity status lacks enough information. Therefore, the goal of the present work was to characterize, cytogenetically, populations of H. malabaricus from both basins, by using conventional staining, Ag-NOR and C-banding techniques. All specimens presented a diploid number of 2n = 40 with metacentric/submetacentric chromosomes, without differences between sexes, thereby representing the so-called "karyomorph F". The first metacentric pair presented a remarkably larger size in relation to the other pairs. The NORs were multiple, comprising the terminal region on long arms of two chromosomal pairs in both populations. However, the C-banding pattern was somewhat distinguishable between samples. Although sharing heterochromatic blocks at centromeric region of all chromosomes, the population from Itapicuru River basin appeared to have some more conspicuous blocks than those observed in the population from Contas River basin. The similar karyotype observed in both populations suggests a common geological history between them. The present results represent an advance in the knowledge about the cytogenetic pattern of H. malabaricus populations from poorly studied basins.

  8. Genus four superstring measures

    OpenAIRE

    Cacciatori, Sergio L.; Piazza, Francesco Dalla; van Geemen, Bert

    2008-01-01

    A main issue in superstring theory are the superstring measures. D'Hoker and Phong showed that for genus two these reduce to measures on the moduli space of curves which are determined by modular forms of weight eight and the bosonic measure. They also suggested a generalisation to higher genus. We showed that their approach works, with a minor modification, in genus three and we announced a positive result also in genus four. Here we give the modular form in genus four explicitly. Recently S...

  9. Characiformes: Characidae

    Indian Academy of Sciences (India)

    DIOVANI PISCOR

    2017-08-24

    Aug 24, 2017 ... DNA extraction, production of probes, and fluorescence in situ hybridization. Genomic DNA was extracted from ... Estadual Paulista – UNESP (protocol number: 2335). Results. The karyotype of A. marionae .... ciation of 5S rRNA and histone H3 genes in insects, and repetitive DNA similarity between the B ...

  10. ANÁLISIS BIOGEOGRÁFICO DE LOS PECES CHARACIFORMES DE VENEZUELA

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    Ana Leonor Bonilla Rivero

    2013-01-01

    Full Text Available Se realizó un análisis biogeográfico basado en los peces Characiformes de Venezuela con el objetivo de explorar la importancia relativa de los procesos que han contribuido con el establecimiento de los patrones de distribución actuales de la ictiofauna continental venezolana. La información geográfica y filogenética disponible se analizó siguiendo los métodos de Análisis de Parsimonia de Endemismos (PAE y Análisis de Parsimonia de Brooks (BPA. El PAE señaló fundamentalmente a los Llanos Occidentales y el sur del Amazonas como áreas de endemismo. El BPA realizado con la información filogenética de siete géneros mostró un patrón generalizado con los clados (Caribe + Maracaibo y ((((Río Negro+Orinoco + Paria + Valencia + Cuyuní, donde se destaca un evento de dispersión desde la cuenca del río Negro hacia el río Orinoco. Los resultados de ambos métodos biogeográficos indican que la región de los llanos - amazonas, donde se conjugó la biota del incipiente Orinoco con la biota amazónica, contiene el mayor número de especies, las áreas de endemismo mejor sustentadas, así como distintos eventos de especiación y posterior dispersión hacia otras regiones. La biota de la región nortecostera del país parece más bien gobernada por procesos de especiación vicariante de carácter puntual por el aislamiento histórico de sus drenajes.

  11. Una nueva especie de pez del género Hemibrycon (Characiformes:Characidae

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    César Román-Valencia

    2006-03-01

    Full Text Available Se describe Hemibrycon pautensis (Characiformes: Characidae, una especie nueva de pez del río Paute al oriente de Ecuador. El nuevo taxón se distingue de las demás especies por las siguientes caracteristicas: ocho a nueve radios ramificados enaleta dorsal (vs. seis a siete, y 27 -28 en la aleta anal (vs.16 -26, excepto en H. dariensis la cual presenta 22 -27, en H. metae 26 -31 y H. jabonero 23 -28; no presenta placa faringea dorsal (vs. presenta; basihial dividido en dos y cartilaginoso (vs. óseo y cartilaginoso en la parte superior. Hemibrycon pautensis es parecida a H. metae es parecida a H. metae por el borde externo de las aletas pélvicas oblicuo. Se distinguen por la posición de las aletas pectorales con relación al extremo del hocico (38.24- 41.6 en H. pautensis vs. 21.21-25.87 y por la posición de las aletas pectorales con relación al origen de la aleta dorsal (20.95-24.30 en Hemibrycon pautensis vs. 35.89-42.63, y por el número de radiales proximales en la cintura pectoral (cinco en Hemibrycon pautensis vs. tres a cuatro. Además, la distribución geográfica de H. metae está restringida a la cuenca alta del río Meta en Colombia. Se distingue de H. boquiae por el número de escamas entre la línea lateral y el origen de la aleta dorsal (ocho en H. pautensis vs. 5-7, por la distancia entre el hocico y el origen de las aletas pélvicas (38.00-42.90% en H. pautensis vs.42.9-46.19%, por la longitud de las aletas pélvicas (13.77-17.96% en H. pautensis vs. 10.72-13.21%, y por la longitud del hocico (21.34-27.88 en H. pautensis vs. 26.92-33.66%.Una nueva especie de pez del género Hemibrycon (Characiformes: Characidae. Hemibrycon pautensis (Characiformes, Characidae, a new fish species from Paute River, eastern Ecuador is described. Diagnostic characteristics: eight to nine branched rays in the dorsal fin (vs.six to seven, and 27 -28 in the anal fin (vs.16 -26, except in H. dariensis which presents 22 -27, in H. metae 26 -31 and H

  12. Losses of immunoreactive parvalbumin amacrine and immunoreactive alphaprotein kinase C bipolar cells caused by methylmercury chloride intoxication in the retina of the tropical fish Hoplias malabaricus

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    Bonci D.M.O.

    2006-01-01

    Full Text Available To quantify the effects of methylmercury (MeHg on amacrine and on ON-bipolar cells in the retina, experiments were performed in MeHg-exposed groups of adult trahiras (Hoplias malabaricus at two dose levels (2 and 6 µg/g, ip. The retinas of test and control groups were processed by mouse anti-parvalbumin and rabbit anti-alphaprotein kinase C (alphaPKC immunocytochemistry. Morphology and soma location in the inner nuclear layer were used to identify immunoreactive parvalbumin (PV-IR and alphaPKC (alphaPKC-IR in wholemount preparations. Cell density, topography and isodensity maps were estimated using confocal images. PV-IR was detected in amacrine cells in the inner nuclear layer and in displaced amacrine cells from the ganglion cell layer, and alphaPKC-IR was detected in ON-bipolar cells. The MeHg-treated group (6 µg/g showed significant reduction of the ON-bipolar alphaPKC-IR cell density (mean density = 1306 ± 393 cells/mm² compared to control (1886 ± 892 cells/mm²; P < 0.001. The mean densities found for amacrine PV-IR cells in MeHg-treated retinas were 1040 ± 56 cells/mm² (2 µg/g and 845 ± 82 cells/mm² (6 µg/g, also lower than control (1312 ± 31 cells/mm²; P < 0.05, differently from the data observed in displaced PV-IR amacrine cells. These results show that MeHg changed the PV-IR amacrine cell density in a dose-dependent way, and reduced the density of alphaKC-IR bipolar cells at the dose of 6 µg/g. Further studies are needed to identify the physiological impact of these findings on visual function.

  13. The genus Bipolaris.

    Science.gov (United States)

    Manamgoda, D S; Rossman, A Y; Castlebury, L A; Crous, P W; Madrid, H; Chukeatirote, E; Hyde, K D

    2014-09-01

    The genus Bipolaris includes important plant pathogens with worldwide distribution. Species recognition in the genus has been uncertain due to the lack of molecular data from ex-type cultures as well as overlapping morphological characteristics. In this study, we revise the genus Bipolaris based on DNA sequence data derived from living cultures of fresh isolates, available ex-type cultures from worldwide collections and observation of type and additional specimens. Combined analyses of ITS, GPDH and TEF gene sequences were used to reconstruct the molecular phylogeny of the genus Bipolaris for species with living cultures. The GPDH gene is determined to be the best single marker for species of Bipolaris. Generic boundaries between Bipolaris and Curvularia are revised and presented in an updated combined ITS and GPDH phylogenetic tree. We accept 47 species in the genus Bipolaris and clarify the taxonomy, host associations, geographic distributions and species' synonymies. Modern descriptions and illustrations are provided for 38 species in the genus with notes provided for the other taxa when recent descriptions are available. Bipolaris cynodontis, B. oryzae, B. victoriae, B. yamadae and B. zeicola are epi- or neotypified and a lectotype is designated for B. stenospila. Excluded and doubtful species are listed with notes on taxonomy and phylogeny. Seven new combinations are introduced in the genus Curvularia to accomodate the species of Bipolaris transferred based on the phylogenetic analysis. A taxonomic key is provided for the morphological identification of species within the genus.

  14. Minimal genus one curves

    OpenAIRE

    Sadek, Mohammad

    2012-01-01

    In this paper we consider genus one equations of degree $n$, namely a (generalised) binary quartic when $n=2$, a ternary cubic when $n=3$, and a pair of quaternary quadrics when $n=4$. A new definition for the minimality of genus one equations of degree $n$ over local fields is introduced. The advantage of this definition is that it does not depend on invariant theory of genus one curves. We prove that this definition coincides with the classical definition of minimality for all $n\\le4$. As a...

  15. The genus Baijiania (Cucurbitaceae)

    NARCIS (Netherlands)

    Wilde, de W.J.J.O.; Duyfjes, B.E.E.

    2003-01-01

    The genus Baijiania, originally thought to be indigenous in China and Borneo, appears to be restricted to Borneo. The only species is Baijiania borneensis, with two varieties, the type variety and var. paludicola Duyfjes, var. nov.

  16. Alternagin-C (ALT-C), a Disintegrin-Like Cys-Rich Protein Isolated from the Venom of the Snake Rhinocerophis alternatus, Stimulates Angiogenesis and Antioxidant Defenses in the Liver of Freshwater Fish, Hoplias malabaricus.

    Science.gov (United States)

    Monteiro, Diana Amaral; Selistre-de-Araújo, Heloisa Sobreiro; Tavares, Driele; Fernandes, Marisa Narciso; Kalinin, Ana Lúcia; Rantin, Francisco Tadeu

    2017-09-28

    Alternagin-C (ALT-C) is a disintegrin-like protein isolated from Rhinocerophis alternatus snake venom, which induces endothelial cell proliferation and angiogenesis. The aim of this study was to evaluate the systemic effects of a single dose of alternagin-C (0.5 mg·kg -1 , via intra-arterial) on oxidative stress biomarkers, histological alterations, vascular endothelial growth factor (VEGF) production, and the degree of vascularization in the liver of the freshwater fish traíra, Hoplias malabaricus , seven days after the initiation of therapy. ALT-C treatment increased VEGF levels and hepatic angiogenesis. ALT-C also enhanced hepatic antioxidant enzymes activities such as superoxide dismutase, catalase, glutathione peroxidase, and glutathione reductase, decreasing the basal oxidative damage to lipids and proteins in the fish liver. These results indicate that ALT-C improved hepatic tissue and may play a crucial role in tissue regeneration mechanisms.

  17. B chromosomes in the species Prochilodus argenteus (Characiformes, Prochilodontidae: morphologicalidentity and dispersion

    Directory of Open Access Journals (Sweden)

    Manolo Penitente

    2015-03-01

    Full Text Available B chromosomes have attracted the attention of Neotropical fish cytogeneticists in recent years, both for their remarkable occurrence in this group and also because of the interest in studies of the genetic structure and role played in the genome of these organisms. The aim of this study was to report the first occurrence of supernumerary chromosomes in Prochilodus argenteus (Agassiz, 1829, this being the fifth carrier species among thirteen within the genus Prochilodus (Agassiz, 1829. The extra elements identified in this species are small sized heterochromatic chromosomes characterized by a low mitotic instability index, being very similar to other supernumerary chromosomes described in the species of the genus Prochilodus. Morphology, structure and dispersion of the supernumerary genomic elements which occur in species of this genus are discussed aiming to better understand aspects involved the origin of supernumerary chromosomes and the differentiation process and relationships among species of this family.

  18. Ontogenetic changes in mouth morphology triggers conflicting hypotheses of relationships in characid fishes (Ostariophysi: Characiformes

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    Alice Hirschmann

    2017-03-01

    Full Text Available ABSTRACT Bryconamericus lethostigmus is the type-species of the monotypic genus Odontostoechus, diagnosed in part based on the presence of a unique tooth series in the premaxilla. Recently a new proposal of classification of the Stevardiinae placed Odontostoechus as a junior synonym of a monophyletic genus Bryconamericus sensu stricto, a genus characterized by the presence of two tooth series. Bryconamericus lethostigmus is redescribed herein and the single tooth series in the premaxilla is demonstrated to originate from merging of the external tooth row with the inner row during ontogeny refuting primary hypothesis of homology between the mouth morphology of B. lethostigmus and the genera Bryconacidnus, Ceratobranchia, Monotocheirodon, Othonocheirodus, Rhinopetitia and Rhinobrycon. A phylogeographic analysis indicated that the pattern described for the sympatric species Diapoma itaimbe is not mirrored by B. lethostigmus. The results also do not support the hypothesis of a new species in the rio Araranguá drainage.

  19. The cyanobacterial genus Macrospermum

    Czech Academy of Sciences Publication Activity Database

    Komárek, Jiří

    2008-01-01

    Roč. 8, č. 1 (2008), s. 79-86 ISSN 1802-5439 R&D Projects: GA AV ČR IAA600050704 Institutional research plan: CEZ:AV0Z60050516 Keywords : cyanobacteria * taxonomy * pantropical genus Subject RIV: EF - Botanics

  20. Genus I. Leptospira

    Science.gov (United States)

    Leptospira comprise a diverse group of bacteria. Some species cause serious infections in animals and humans. These bacteria are aerobes that consume long-chain fatty acids and alcohols as carbon and energy sources. This genus is distinguished from Leptonema or Turneriella by lack of similarity u...

  1. The genus Lagenophora (Compositae)

    NARCIS (Netherlands)

    Cabrera, Angel L.

    1966-01-01

    The genus Lagenophora was first described by Cassini under the name Lagenifera (in Bull. Soc. Philomat. 12, 1816, 199) with the following diagnosis: ‘Ce genre, de la tribus des astérées, comprend le calendula magellanicá, Willd. et le bellis stipitata, Labill. Son principal caractère reside dans la

  2. The amphipod genus Acidostoma

    NARCIS (Netherlands)

    Dahl, E.

    1964-01-01

    The genus Acidostoma was established by Lilljeborg (1865, p. 24) to receive Anonyx obesus Sp. Bate (1862, p. 74). Afterwards two further species have been added, viz. A. laticorne G. O. Sars (1879, p. 440) and A. nodiferum Stephensen (1923, p. 40). In the present paper it will be shown that A.

  3. Morphometrics and allometry of the larvae of five Characiformes species in the Paraíba do Sul River Basin.

    Science.gov (United States)

    Souza, Guilherme; Caramaschi, Erica P; Monteiro, Leandro R

    2017-08-01

    The aim of this study was to analyse the morphology and allometry of larvae belonging to five potamodromous species. Five breeding species belonging to the order Characiformes [Salminus brasiliensis (Cuvier, 1816), Leporinus steindachneri, Eigenmann, 1907, Prochilodus lineatus (Valenciennes, 1837), Prochilodus vimboides (Kner,1859) and Brycon insignis, Steindachner, 1877] were used to obtain larvae samples during the pre-flexing, post-flexing, and juvenile developmental stages. When we observed the degree-hour (DH) amplitude time values, we found three developmental groups based on allometry and morphometrics within the period between the pre-flexing and post-flexing phases. Group 1 consists of the species S. brasiliensis and B. insignis, Group 2 consists of P. lineatus and P. vimboides, and Group 3 consists of L. steindachneri. Group 1 requires less development time and has more slender larvae. Group 2 has a moderate development time and larvae with a more rounded shape. Group 3 presents a greater development time and an intermediate larval morphology. It was possible to classify the larvae through cross-validated discriminant analyses based on seven morphometric variables with 90% accuracy in B. insignis, 83% in L. steindachneri, 91% in P. lineatus, 80% in P. vimboides, and 96% in S. brasiliensis. These results indicate larval characteristics that can be used for the taxonomic identification of the icthyoplankton.

  4. Genus g temperature string theory

    International Nuclear Information System (INIS)

    Murphy, P.; Sen, S.

    1989-01-01

    The geometric approach to bosonic temperature string theory for genus g is formulated in the operator approach of Vafa. It is shown that the Hagedorn temperature exists for all genus g and a conjectured genus g expression for superstring theories with temperature is constructed. (orig.)

  5. What is the genus?

    CERN Document Server

    Popescu-Pampu, Patrick

    2016-01-01

    Exploring several of the evolutionary branches of the mathematical notion of genus, this book traces the idea from its prehistory in problems of integration, through algebraic curves and their associated Riemann surfaces, into algebraic surfaces, and finally into higher dimensions. Its importance in analysis, algebraic geometry, number theory and topology is emphasized through many theorems. Almost every chapter is organized around excerpts from a research paper in which a new perspective was brought on the genus or on one of the objects to which this notion applies. The author was motivated by the belief that a subject may best be understood and communicated by studying its broad lines of development, feeling the way one arrives at the definitions of its fundamental notions, and appreciating the amount of effort spent in order to explore its phenomena.

  6. Spiky higher genus strings

    International Nuclear Information System (INIS)

    Ambjoern, J.; Bellini, A.; Johnston, D.

    1990-10-01

    It is clear from both the non-perturbative and perturbative approaches to two-dimensional quantum gravity that a new strong coupling regime is setting in at d=1, independent of the genus of the worldsheet being considered. It has been suggested that a Kosterlitz-Thouless (KT) phase transition in the Liouville theory is the cause of this behaviour. However, it has recently been pointed out that the XY model, which displays a KT transition on the plane and the sphere, is always in the strong coupling, disordered phase on a surface of constant negative curvature. A higher genus worldsheet can be represented as a fundamental region on just such a surface, which might seem to suggest that the KT picture predicts a strong coupling region for arbitrary d, contradicting the known results. We resolve the apparent paradox. (orig.)

  7. Spiky higher genus strings

    International Nuclear Information System (INIS)

    Ambjorn, J.; Bellini, A.; Johnston, D.

    1991-01-01

    This paper reports that it is clear from both the non-perturbative and perturbative approaches to two-dimensional quantum gravity that a new strong coupling regime is setting in at d = 1, independent of the genus of the worldsheet being considered. It has been suggested that a Kosterlitz-Thouless (KT) phase transition in the Liouville theory is the cause of this behavior. However, it has recently been pointed out that the XY-model, which displays a KT transition on the plane and the sphere, is always in the strong coupling, disordered phase on a surface of constant negative curvature. A higher genus worldsheet can be represented as a fundamental region on just such a surface, which might seem to suggest that the KT picture predicts a strong coupling region for arbitrary d, contradicting the known results. The authors resolve the apparent paradox

  8. Molecular identification of cryptic diversity in species of cis-Andean Mylossoma (Characiformes: Serrasalmidae).

    Science.gov (United States)

    Mateussi, Nadayca T B; Pavanelli, Carla Simone; Oliveira, Claudio

    2017-09-01

    Mylossoma is a Serrasalmidae genus with only two current valid species in the cis-Andean region but with several available names, today considered as junior synonymous. Morphological information combined with single-locus DNA sequences of cytochrome c oxidase I gene analysed by Barcode Index Number and General Mixed Yule Coalescent model were used in the present study to help the recognition of Operational Taxonomic Units (OTUs) in cis-Andean Mylossoma and discuss species boundaries within the genus. Five OTUs were recognized based on both morphological and molecular approaches. The analysis using the Barcode Index Number resulted in five OTUs, with M. duriventre being split in one unity in the Amazon, one in the Orinoco, one in Paraná-Paraguay and one in Tocantins-Araguaia which is coherent with our morphological results.

  9. Parodon orinocensis (Bonilla et al., 1999 (Characiformes: Parodontidae: emendations and generic reallocation

    Directory of Open Access Journals (Sweden)

    Leonardo F. S Ingenito

    Full Text Available During recent studies on Parodontidae, specimens of the Venezuelan species Parodon orinocensis (Bonilla, Machado-Allison, Silvera, Chernoff, López & Lasso, 1999 were examined and a few incongruencies with the original description of the species were noted. Emendations to the descriptions of the jaw teeth and color pattern are presented. Three autapomorphies were also observed and are listed herein. The species is moved from genus Apareiodon to Parodon based on presence of dentary teeth.

  10. Genus Ranges of Chord Diagrams.

    Science.gov (United States)

    Burns, Jonathan; Jonoska, Nataša; Saito, Masahico

    2015-04-01

    A chord diagram consists of a circle, called the backbone, with line segments, called chords, whose endpoints are attached to distinct points on the circle. The genus of a chord diagram is the genus of the orientable surface obtained by thickening the backbone to an annulus and attaching bands to the inner boundary circle at the ends of each chord. Variations of this construction are considered here, where bands are possibly attached to the outer boundary circle of the annulus. The genus range of a chord diagram is the genus values over all such variations of surfaces thus obtained from a given chord diagram. Genus ranges of chord diagrams for a fixed number of chords are studied. Integer intervals that can be, and those that cannot be, realized as genus ranges are investigated. Computer calculations are presented, and play a key role in discovering and proving the properties of genus ranges.

  11. Chemistry of the Genus Plectranthus

    OpenAIRE

    S. M. Batterjee; H. A. Albar; M. Abdel-Mogib

    2002-01-01

    This review presents the phytochemical constituents of the genus Plectranthus reported up to 1999. Only a tetrameric derivative of caffeic acid was isolated from P. japonicus, but a group of long-chain alkylphenols, of possible taxonomic significance in the genus, was also isolated. As a genus of the subfamily Nepetoideae, Plectranthus is free from iridoid glycosides and rich in essential oil (i.e. > 0.5% volatile oil on a dry weight basis). Diterpenoids are the more common secondary metaboli...

  12. Lebiasina yepezi, a new Lebiasininae (Characiformes: Lebiasinidae from the Serra Parima-Tapirapecó mountains

    Directory of Open Access Journals (Sweden)

    André L. Netto-Ferreira

    Full Text Available Lebiasina yepezi, a new Lebiasininae with a conspicuous color pattern, is described. The new species is endemic of the headwaters of the rio Negro, rio Branco, and rio Orinoco in the Serra Parima-Tapirapecó Mountains, at the border of Brazil and Venezuela. The new species is readily distinguished from all other Lebiasininae by the presence of four black longitudinal stripes on the trunk, and the triangular shaped dorsal surface of the mesethmoid, lacking lateral projections. The unusual color pattern is contrasted with those of other lebiasinin, as well as members of the pyrrhulinin genus Nannostomus. A close relationship between Lebiasina yepezi and the Gran Sabana (Venezuela species is suggested based in color pattern features. The present contribution corresponds to a further refutation of the type locality of L. intermedia, as suggested on its description, since Lebiasinins, except L. bimaculata, L. boruca, and L. festae, do not occur in low land waters.

  13. Comparative cytogenetics in Astyanax (Characiformes: Characidae with focus on the cytotaxonomy of the group

    Directory of Open Access Journals (Sweden)

    Renata Cristina Claudino de Oliveira Tenório

    Full Text Available Astyanax is a diverse group of Neotropical fishes, whose different forms occupy different environments. This great diversity is also reflected on cytogenetic aspects and molecular markers, which have repeatedly been demonstrated by cytogenetic studies. In order to characterize the karyotype of species of this genus, six species were studied: Astyanax altiparanae, A.argyrimarginatus, A. elachylepis, A. xavante, and two new species provisionally called Astyanax sp. and A. aff. bimaculatus. A detailed cytogenetic study based on conventional staining with Giemsa, AgNORs, C-banding, base-specific fluorochromes, and FISH using ribosomal genes 18S and 5S was conducted, aiming to understand some of the chromosomal mechanisms associated with the high diversification that characterizes this group and culminated with the establishment of these species. The results showed 2n = 50 chromosomes for five species and a karyotype with 52 chromosomes in Astyanax sp. Small variations in the macrostructure of the karyotypes were identified, which were quite relevant when analyzed by classical banding, fluorochromes, and FISH methods. These differences among Astyanax spp. (2n = 50 are largely due to changes in the amount and types of heterochromatic blocks. Astyanax sp (2n = 52, in addition to variations due to heterochromatic blocks, has its origin possibly by events of centric fission in a pair of chromosomes followed by minor rearrangements.These results show an interesting karyotypic diversity in Astyanax and indicate the need of a review of the group referred as A. aff. bimaculatus and the description of Astyanax sp., including the possibility of inclusion of this unit in another genus.

  14. Review: Fitokimia genus Baccaurea spp.

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    Gunawan Gunawan

    2016-09-01

    Full Text Available Genus BaccaureaLour. adalah salah satu anggota dari famili Phyllanthaceae, merupakan genus yang cukup besar dengan anggota mencapai 43 spesies. Pada pengobatan tradisional genus Baccaurea telah dimanfaatkan masyarakat untuk mengobati  sembelit, pembengkakan pada mata, radang sendi, abses, sakit perut, memperlancar haid serta buang air kecil. Beberapa anggota genus Baccaureamemiliki potensi sebagai tumbuhan obat karena mengandung metabolit sekunder seperti alkaloid, flavonoid, karotenoid, antosianin, tanin, asam rosmarinik dan fenolik. Kandungan metabolit sekunder tersebut berpotensi sebagai antioksidan, antikanker, antimikroba, antidiabetes, antiinflamasi, antitripanosoma. B. ramiflora, B. lanceolata, B. macrocarpa, B. angulata, B. motleyana, B. brevipes, B. hookeri, B.recemosa, B. sapida, B. polyneura, B.parviflora dan B.dulcis adalah anggota genus Baccaurea yang berpotensi sebagai tumbuhan obat.

  15. Efeito da composição e osmolalidade do diluidor do sêmen criopreservado de piracanjuba Brycon orbignyanus (Characiformes)

    OpenAIRE

    Galvis, Dominga Isabel López

    2014-01-01

    A piracanjuba Brycon orbignyanus é um peixe da ordem Characiformes, nativo da América do Sul. As mudanças no curso do rio, urbanização, poluição e construção de hidrelétricas são algumas das razões pelas quais o B. orbignyanus está atualmente classificado como uma espécie ameaçada de extinção. A criopreservação de sêmen de peixes fornece uma ferramenta pela qual a reprodução é otimizada, melhorando os programas de conservação e melhoramento genético das espécies. Um meio de ...

  16. Markiana nigripinnis (Perugia, 1891 as a putative member of the subfamily Stevardiinae (Characiformes: Characidae: spermatic evidence

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    Clarianna Martins Baicere-Silva

    2011-06-01

    Full Text Available The genus Markiana was until recently recognized as incertae sedis in the family Characidae, even though alternative placements for this genus have been advanced since its original description. More recently, it was hypothesized that Markiana nigripinnis is part of a clade informally named the Astyanax clade, indicating the putative close relationship of Markiana with the genus Astyanax. Examination of sperm ultrastructure of representatives of Astyanax and M. nigripinnis shows no evidence for this hypothesized close relationship. Rather, the spermatozoa of M. nigripinnis share characters found in spermatozoa of the non-inseminating members of the subfamily Stevardiinae, such as an angle of nuclear rotation equal to 85º resulting in a lateral position of the double nuclear fossa and flagellum. As with the non-inseminating Stevardiinae, sperm nuclei are also slightly elongate toward the flagellum, the proximal centriole is partially inside the nuclear fossa and anterior and oblique to the distal centriole, and the midpiece is short and strongly asymmetric. Additionally, M. nigripinnis shares with the other members of the Stevardiinae the presence of only four teeth in the inner row of the premaxillary and a short triangular ectopterygoid, which is never more than twice the length of the palatine.O gênero Markiana até recentemente foi reconhecido como incertae sedis na família Characidae, apesar da localização alternativa para este gênero desde sua descrição original. Mais recentemente, surgiu a hipótese de que Markiana nigripinnis faz parte de um clado chamado informalmente de "Astyanax clade", indicando a suposta relação de Markiana com o gênero Astyanax. A análise da ultraestrutura dos espermatozoides de representantes do gênero Astyanax e M. nigripinnis não mostra nenhuma evidência de estreita relação. Pelo contrário, os espermatozóides de M. nigripinnis compartilham o padrão encontrado nos espermatozoides dos membros n

  17. THE GENUS DERMATOPHILUS

    Science.gov (United States)

    Gordon, Morris A.

    1964-01-01

    Gordon, M. A. (New York State Department of Health, Albany). The genus Dermatophilus. J. Bacteriol. 88:509–522. 1964.—Seventeen strains of Dermatophilus originating in skin lesions of cattle, sheep, horses, deer, and man were compared as to conditions for growth, colonial characteristics under varying conditions, microscopic morphology, and biochemical reactions. All grew well aerobically at 37 C and were facultatively anaerobic. They were morphologically similar in both gross and microscopic appearance, and most produced motile spores. Stable gray variants often appeared among the orange-yellow “wild-type” colonies. Acid without gas was produced consistently from glucose and fructose, and transitorily from galactose, but was produced from none of eight other carbohydrates except belatedly by some strains from maltose. Almost all strains hydrolyzed casein, most of them digested BCP milk with varying rapidity, and the majority liquefied gelatin, but there was considerable variation in this last property. Differences crossed both host and geographic lines. It is concluded that all isolates can be accommodated in the species D. congolensis Van Saceghem 1915, emend. 1916, 1934, with D. dermatonomus and D. pedis falling into synonymy. Images PMID:14203370

  18. THE GENUS DERMATOPHILUS.

    Science.gov (United States)

    GORDON, M A

    1964-08-01

    Gordon, M. A. (New York State Department of Health, Albany). The genus Dermatophilus. J. Bacteriol. 88:509-522. 1964.-Seventeen strains of Dermatophilus originating in skin lesions of cattle, sheep, horses, deer, and man were compared as to conditions for growth, colonial characteristics under varying conditions, microscopic morphology, and biochemical reactions. All grew well aerobically at 37 C and were facultatively anaerobic. They were morphologically similar in both gross and microscopic appearance, and most produced motile spores. Stable gray variants often appeared among the orange-yellow "wild-type" colonies. Acid without gas was produced consistently from glucose and fructose, and transitorily from galactose, but was produced from none of eight other carbohydrates except belatedly by some strains from maltose. Almost all strains hydrolyzed casein, most of them digested BCP milk with varying rapidity, and the majority liquefied gelatin, but there was considerable variation in this last property. Differences crossed both host and geographic lines. It is concluded that all isolates can be accommodated in the species D. congolensis Van Saceghem 1915, emend. 1916, 1934, with D. dermatonomus and D. pedis falling into synonymy.

  19. Chemodiversity in the genus Aspergillus

    DEFF Research Database (Denmark)

    Frisvad, Jens Christian; Larsen, Thomas Ostenfeld

    2015-01-01

    to be characterized. The genus Aspergillus is cladistically holophyletic but phenotypically polythetic and very diverse and is associated to quite different sexual states. Following the one fungus one name system, the genus Aspergillus is restricted to a holophyletic clade that include the morphologically different...... biosynthetic family isoextrolites. However, it appears that secondary metabolites from one Aspergillus section have analogous metabolites in other sections (here also called heteroisoextrolites). In this review, we give a genus-wide overview of secondary metabolite production in Aspergillus species. Extrolites...

  20. Extensive polymorphism and chromosomal characteristics of ribosomal DNA in the characid fish Triportheus venezuelensis (Characiformes, Characidae

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    Mauro Nirchio

    2007-01-01

    Full Text Available The karyotype and chromosomal characteristics of the characid fish Triportheus venezuelensis were investigated using differential staining techniques (C-banding, Ag-NOR staining and fluorescent in situ hybridization (FISH with an 18S rDNA probe. The diploid chromosome number (2n = 52, karyotype composition and sex chromosome determination system of the ZZ/ZW type were the same as previously described in other species of the genus Triportheus. However, extensive variation regarding nucleolus organizer regions (NOR different from other species was observed. 18S rDNA sequences were distributed on nine chromosome pairs, but the number of chromosomes with Ag-NORs was usually lower, reaching a maximum of four chromosomes. When sequential staining experiments were performed, it was demonstrated that: 1. active NORs usually corresponded to segments with 18S rDNA genes identified in FISH experiments; 2. several 18S rDNA sequences were not silver-stained, suggesting that they do not correspond to active NORs; and 3. some chromosomes with silver-stained regions did not display any 18S rDNA signals. These findings characterize an extensive polymorphism associated with the NOR-bearing chromosomes of T. venezuelensis and emphasize the importance of combining traditional and molecular techniques in chromosome studies.

  1. The genus Vitex: A review.

    Science.gov (United States)

    Rani, Anita; Sharma, Anupam

    2013-07-01

    The review includes 161 references on the genus Vitex, and comprises ethnopharmacology, morphology and microscopy, phytoconstituents, pharmacological reports, clinical studies, and toxicology of the prominent species of Vitex. Essential oils, flavonoids, iridoid glycosides, diterpenoides and ligans constitute major classes of phytoconstituents of the genus. A few species of this genus have medicinal value, among these, leaves and fruits of V. agnus-castus Linn. (Verbenaceae) has been traditionally used in treatment of women complaints. V. agnus-castus has also been included in herbal remedies, which are in clinical use to regulate the menstrual cycle, reduce premenstrual symptom tension and anxiety, treat some menopausal symptoms as well as to treat hormonally induced acne. Despite a long tradition of use of some species, the genus has not been explored properly. In the concluding part, the future scope of Vitex species has been emphasized with a view to establish their multifarious biological activities and mode of action.

  2. Riemann surfaces of infinite genus

    CERN Document Server

    Feldman, Joel S; Trubowitz, Eugene

    2003-01-01

    In this book, Riemann surfaces of infinite genus are constructed geometrically by pasting together plane domains and handles. To achieve a meaningful generalization of the classical theory of Riemann surfaces to the case of infinite genus, one must impose restrictions on the asymptotic behavior of the Riemann surface. In the construction carried out here, these restrictions are formulated in terms of the sizes and locations of the handles and in terms of the gluing maps. The approach used in this book has two main attractions. The first is that much of the classical theory of Riemann surfaces, including the Torelli theorem, can be generalized to this class. The second is that solutions of Kadomcev-Petviashvilli equations can be expressed in terms of theta functions associated with Riemann surfaces of infinite genus constructed in the book. Both of these are developed here. The authors also present in detail a number of important examples of Riemann surfaces of infinite genus (hyperelliptic surfaces of infinit...

  3. Revision of the genus Phaeanthus (Annonaceae)

    NARCIS (Netherlands)

    Mols, J.B.; Keßler, P.J.A.

    2000-01-01

    A revision of the genus Phaeanthus Hook.f. & Thomson (Annonaceae) is presented. The genus comprises 8 species. A key to the fruiting and/or flowering specimens of the genus is included. The genus consists of shrubs to small-sized trees from Malesia and Vietnam. It is characterised by sepals and

  4. Desenvolvimento inicial de Hoplias aff. malabaricus (Bloch, 1794 (Osteichthyes, Erythrinidae da planície alagável do alto rio Paraná, Brasil - DOI: 10.4025/actascibiolsci.v30i2.3608 Early development of Hoplias aff. malabaricus (Bloch, 1794 (Osteichthyes, Erythrinidae in the upper Paraná river floodplain, Brazil - DOI: 10.4025/actascibiolsci.v30i3.3608

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    Gilmar Baumgartner

    2008-05-01

    Full Text Available Este trabalho teve por objetivo caracterizar o desenvolvimento inicial de Hoplias aff. malabaricus. As amostragens foram realizadas entre novembro de 1991 e fevereiro de 1995, em 42 estações de coleta, distribuídas em vários ambientes da planície alagável do alto rio Paraná, Brasil. Para a obtenção do material, foram realizadas amostragens nas regiões pelágica (rede de plâncton e litorânea (“peneirão”. Para a caracterização das diferentes fases, os indivíduos foram separados em períodos larval (estágios de pré-flexão, flexão e pós-flexão e juvenil. Foram analisadas as variáveis morfométricas e merísticas em 269 larvas e 74 juvenis, com comprimento padrão variando entre 6,17 e 49,12 mm. As larvas apresentaram corpo fusiforme e altamente pigmentado, olhos grandes, intestino longo e boca terminal. O número total de miômeros variou de 37 a 45 (23 a 28 pré e 11 a 18 pós-anal. Os juvenis apresentaram a forma do corpo semelhante a do adulto. O número de raios das nadadeiras encontrado para a espécie foi: peitoral 12; pélvica 7-9; dorsal 13-15; e anal 10-12. A análise do crescimento indicou a metamorfose no início do desenvolvimento desta espécie.The aim of this study was to characterize the early development of Hoplias aff. malabaricus. The sampling was conducted during the period from November 1991 through February 1995, at 42 stations distributed in different environments of the upper Paraná river floodplain, Brazil. The specimens were taken from limnetic and littoral regions. Specimens were separated according to their development in larval (preflexion, flexion and postflexion stages and juvenile periods. Morphometric and meristic variables were analyzed in 269 larvae and 74 juveniles (standard length ranging from 6.17 mm to 49.12 mm. Larvae showed fusiform body and intense pigmentation, a long intestine, large eyes and terminal mouth. Number of myomeres ranged from 37 to 45 (23-28 pre and 11-18 post

  5. Una nueva especie de Hyphessobrycon (Characiformes: Characidae de la cuenca del río Telembí, vertiente sur del Pacífico, Colombia A new species of Hyphessobrycon (Characiformes: Characidae from the Telembí River drain- age, Southern Pacific slope of Colombia

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    Carlos A. García-Alzate

    2013-03-01

    Full Text Available El género Hyphessobrycon, se incluye dentro de la subfamilia Tetragonopterinae. Las especies generalmente son pequeñas, no sobrepasan los 70mm de longitud estándar, son importantes económicamente como peces ornamentales, con 128 especies validas que se distribuyen desde el sur de México hasta Río de La Plata en Argentina. Se describe una nueva especie de Hyphessobrycon (Characiformes: Characidae de la cuenca del río Barbacoas, vertiente sur del Pacífico, Colombia, Hyphessobrycon chocoensis de la cuenca del río Telembí, vertiente del Pacífico Colombiano. Las recolectas de los peces fueron realizadas con redes de arrastres y se hicieron en un solo biotopo, zona litoral de remanso y a favor de la corriente. Las medidas de los ejemplares se tomaron punto a punto con un calibrador digital Las observaciones de estructuras óseas y cartílagos se hicieron sobre ejemplares clareados y teñidos (C&T. Las relaciones morfométricas entre especies fueron exploradas empleando 21 variables mediante un análisis de componentes principales (ACP. La nueva especie de Hyphessobrycon, H. chocoensis se distingue de sus congéneres no miembros del grupo flammeus por tener una mancha humeral difusa, no tener una mancha oscura en la aleta dorsal o en el pedúnculo caudal. Se distingue de las demás especies del grupo por el número de radios de la aleta dorsal (ii, 8, i, por el número de radios ramificados en la aleta anal (25-26 y por presentar la mancha humeral difusa, se diferencia de H. tortuguerae por el número de dientes en el maxilar (1-2, por el número de escamas pre- dorsales (10-12 y un alto número de escamas entre la línea lateral y la aleta anal (6-7. Hyphessobrycon chocoensis se puede separar de todos los otros Hyphessobrycon conocidos de las cuencas del Pacifico Colombiano por presentar: un alto número de escamas con poros en la línea lateral, por la longitud hocico-aleta dorsal, por la profundidad del pedúnculo caudal y por el di

  6. Three new species of Hemibrycon (Characiformes: Characidae from the Magdalena River Basin, Colombia

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    César Román-Valencia

    2013-09-01

    Full Text Available Fish biodiversity of aquatic ecosystems is highly threatened by different economic activities driven by human populations, and its description is increasingly a priority. For the Cauca-Magdalena River system we have described 14 species, and the purpose of this paper was to describe three new species belonging to the same genus Hemibrycon from the Nare and Guatapé River drainages of the middle Magdalena River, Colombia. The description was based on a series of 200 specimens, and the use of morphometric, meristic and osteological characters, as well as fish distribution and morphogeometric analytical methods. We have found that Hemibrycon fasciatus n. sp. (n=54 differs from other species of Hemibrycon (that also have a vertical humeral spot in having: melanophores outlining the posterior margins of the scales along sides of body; humeral spot extending onto posterior margin of opercle; a dark lateral stripe, formed by deep pigment that is continuous with the peduncular spot; the toothed portion of the maxilla not reaching the dorsal margin of the dentary (vs. toothed portion of maxilla extending beyond dorsal margin of dentary; all maxillary teeth tricuspid (vs. some unicuspid teeth present on maxilla. H. cardalensis n. sp. (n=64 differs in having: a vertically elongate humeral spot that extends one or two scales below the lateral line canal. H. cardalensis n. sp. differs from all congeners in having the pigment of the caudal spot restricted to the ventral half of the caudal peduncle, and in having melanophores around the anterior scales of the lateral line. Hemibrycon antioquiae n. sp. (n=82 differs in having a circular humeral spot. It differs from the other species with a circular humeral spot, like H. mikrostiktos, in having a projection of disperse melanophores extending from the dorsal margin of the humeral spot to below the lateral stripe. Habitat data and environmental impacts caused by the construction of reservoirs for hydroelectric

  7. A descendent relation in genus 2

    OpenAIRE

    Belorousski, Pasha; Pandharipande, Rahul

    1998-01-01

    A new codimension 2 relation among descendent strata in the moduli space of stable, 3-pointed, genus 2 curves is found. The space of pointed admissible double covers is used in the calculation. The resulting differential equations satisfied by the genus 2 gravitational potentials of varieties in Gromov-Witten theory are described. These are analogous to the WDVV-equations in genus 0 and Getzler's equations in genus 1. As an application, genus 2 descendent invariants of the projective plane ar...

  8. Chemistry of the Genus Plectranthus

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    S. M. Batterjee

    2002-02-01

    Full Text Available This review presents the phytochemical constituents of the genus Plectranthus reported up to 1999. Only a tetrameric derivative of caffeic acid was isolated from P. japonicus, but a group of long-chain alkylphenols, of possible taxonomic significance in the genus, was also isolated. As a genus of the subfamily Nepetoideae, Plectranthus is free from iridoid glycosides and rich in essential oil (i.e. > 0.5% volatile oil on a dry weight basis. Diterpenoids are the more common secondary metabolites in Plectranthus. The majority of them are highly modified abietanoids. This seems to be similar to the pattern of diterpenoids observed for Salvia, but no clerodane diterpenoids were found in Plectranthus.

  9. Chemotaxonomy of the genus Stemphylium

    DEFF Research Database (Denmark)

    Olsen, Kresten Jon Kromphardt; Andersen, Birgitte

    2016-01-01

    The filamentous fungal genus Stemphylium (Anamophic Pleospora) is often found on various crops, and especially the common animal feed plant Medicago sativa (alfalfa) is often infected by this plant pathogen. With this in mind it is important to consider what consequences such a contamination can...... via HPLC-UV/VIS-MS analysis as a third method for identification and to investigate the chemical potential of the genus Stemphylium. A total of 253 unique compounds were used for chemotaxonomy and the majority of these were unknown compounds....

  10. Five new species of Hemibrycon (Characiformes: Characidae from the Río Magdalena basin, Colombia

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    César Román-Valencia

    2010-03-01

    Full Text Available Five new fish species of the genus Hemibrycon are described from the Río Magdalena basin, Colombia, using morphometric, meristic and osteological characters. Hemibrycon paez (n=40 differs in number of lateral line scales (39 to 42 vs. 43 to 54, by the number of scales between lateral line and anal-fin origin (6 to 7 vs. 4 to 5 and between lateral line and dorsal-fin origin (6 to 7 vs. 8; H. quindos (n=66 distinguished from its congeners by one autopomorphy: Males with cartilaginous protuberance, rounded on the anal fin ray branched, along all rays (vs. cartilaginous protuberance not present on anal-fin rays in males, by the maxilla without a fold on its anterior end (vs. maxilla with folding only at posterior end, by the number of pored scales in the lateral line (35 to 40 vs. 40 to 46; H. raqueliae (n=117 distinguished by a widened first tooth on the maxilla with the remaining teeth decreasing sharply in size (vs. first tooth of maxilla slender, remaining teeth gradually diminishing, by the first maxilla tooth pentacuspid and wider than the others (vs. first tooth on maxilla unicuspid or tricuspid and of same size as the others; H. virolinica (n=34 distinguished by the posterior end of the extrascapular spine surpassing the postemporal (vs. posterior end of extrascapular not exceeding postemporal spine, by having the posterior end of the first proximal pteryigiophores of dorsal fin of the same size as the anterior edge (vs. the posterior end of the first proximal pteryigiophores of dorsal fin more elongated than the anterior edge; and H. yacopiae (n=78 is distinguished by the following autopomorphic characters: first laterosensorial infraorbitals canal in contact with the posterior end of antorbital (vs. laterosensorial canal not reaching posterior end of antorbital, by the tip of the supraoccipital spine widened (vs. supraoccipital spine acute, by the posterior end of ectopterygoids failing to come in contact with the quadrate bone (vs. in

  11. Additions to the genus Acoridium

    NARCIS (Netherlands)

    Ames, Oakes

    1937-01-01

    The genus Acoridium is characterized by an extraordinary history. The original species, A. tenellum, a native of the Philippine Islands, was described at length from a fruiting specimen in 1843 by Nees von Esenbeck and referred to the Philydraceae. This treatment was prompted by the aspect of the

  12. The genus Babylonia (Prosobranchia, Buccinidae)

    NARCIS (Netherlands)

    Regteren Altena, van C.O.; Gittenberger, E.

    1981-01-01

    INTRODUCTION The members of the Ivory Shell genus Babylonia Schlüter, 1838, belonging to the Buccinidae, are characterized by more or less slender buccinoid shells, mostly ornamented with a beautiful colour-pattern. Some species, e.g. the type species B. spirata, have a conspicuous sutural canal

  13. Feeding and morphological analysis of the digestive tract of four species of fish (Astyanax altiparanae, Parauchenipterus galeatus, Serrasalmus marginatus and Hoplias aff. malabaricus from the upper Paraná River floodplain, Brazil

    Directory of Open Access Journals (Sweden)

    D. Peretti

    Full Text Available The present study is inspired by the great wealth of species exhibited by the ichthiofauna. Not only concepts and techniques of ecology deserve attention, but also knowledge in other biological areas, such as zoology and anatomy, are necessary. The intention of the present work is to discover the morphology of fish through the study of the digestive tract morphology, associating it to diet data, in order to better understand the biology of four fish species of the upper Paraná River floodplain. The samples were collected quarterly in the year 2000 with gillnets of different meshes. The stomach content was analyzed under a stereoscopic microscope and the frequencies of occurrence (FO and volumetric (FV and the alimentary index (IAi were calculated. Various morphologic characteristics were analyzed and schematized using a light chamber. The species were grouped into two trophic guilds - insectivores (Astyanax altiparanae and Parauchenipterus galeatus and piscivores (Serrasalmus marginatus and Hoplias aff. malabaricus. The first two, although consumers of insects, preyed on different alimentary groups, notably Hymenoptera in the case of A. altiparanae and Coleoptera in the case of P. galeatus. Serrasalmus marginatus and H. aff. malabaricus consumed mainly fishes. However, only pieces of prey were usually found in the stomach content of the first species, whereas whole fishes were found in the stomach content of the second. Astyanax altiparanae exhibited characteristics that allowed it to obtain food in several compartments of the water column. Similarly P. galeatus consumed food resources that were available in all aquatic compartments, although the abilities to capture, to manipulate and to absorb food differed, as shown by the importance of teeth plates and pharyngeal teeth. Serrasalmus marginatus and H. aff. malabaricus, although resembling each other in many aspects of the digestive tract morphology, differed in the strategies used to capture

  14. The development of the princial genus theorem

    OpenAIRE

    Lemmermeyer, Franz

    2002-01-01

    In this article we sketch the development of the principal genus theorem from its conception by Gauss in the case of binary quadratic forms to the cohomological formulation of the principal genus theorem of class field theory by Emmy Noether.

  15. HEMOPARASITOS DE PIRANHAS VERMELHAS PYGOCENTRUS NATTERERI (KNER, 1858 (CHARACIFORMES: CHARACIDAE CAPTURADAS NA REGIÃO DO MÉDIO RIO ARAGUAIA, ESTADO DE GOIÁS, GO

    Directory of Open Access Journals (Sweden)

    Isabela Vieira Carneiro

    2016-07-01

    Full Text Available This work aimed to evaluate blood smears of 128 red piranha specimens Pygocentrus nattereri (Kner, 1858 (Characiformes: Characidae as for the presence of hemoparasites and blood cells that were visualized. Samples were collected in Rio Vermelho (Red River (15°10'44.73''S and 51°09'55.83W'', in the Brazilian state of Goiás, between April 2012 and August 2013, including ebb, full and dry phases. After identificating and numbering the piranhas, we collected approximately 0.5 mL of blood from each animal, from the caudal vein or through intracardiac puncture, and two blood smears were done and stained with May GrünwaldGiemsa and Fast Panoptic stains. After euthanasia, the body mass and biometrics of every fish were measured. Abiotic factors of the river water were also analyzed, such as temperature and transparency. In general, the biometric parameters were higher in the full phase of the river, and the values obtained on water quality were similar in relation to the average temperature of the water, which was around 82,4°F. The average transparency of the water varied, being greater at low tide. Erythrocytes, thrombocytes, neutrophils, eosinophils, monocytes, heterophile and lymphocytes were identified as blood cells of red piranhas and hemogregarines have been found in about 25% (32/128 of the blood smears.

  16. Symbiotic diversity in the cosmopolitan genus Acacia

    Science.gov (United States)

    James K. Leary; Paul W. Singleton; Paul G. Scowcroft; Dulal Borthakur

    2006-01-01

    Acacia is the second largest genus within the Leguminosae, with 1352 species identified. This genus is now known to be polyphyletic and the international scientific community will presumably split Acacia into five new genera. This review examines the diversity of biological nitrogen fixation symbiosis within Acacia as a single genus. Due to its global importance, an...

  17. Bioaktivitas dan Kandungan Genus Callicarpa

    OpenAIRE

    -, Erwin

    2016-01-01

    Callicarpa L is one genus of the family Lamiaceae. Callicarpa consisting of approximately 150 species such as shrubs and trees. Various species of Callicarpa is widely used in traditional medicine and it was potentially as antinociceptive, antioxidant, antimicrobial and thrombolytic drugs. Based on various reports results of previous studies have found various types of secondary metabolites from plants Callicarpa such as terpenoids, steroids and flavonoids. Some of these compounds can be deve...

  18. On the concordance genus of topologically slice knots

    OpenAIRE

    Hom, Jennifer

    2012-01-01

    The concordance genus of a knot K is the minimum Seifert genus of all knots smoothly concordant to K. Concordance genus is bounded below by the 4-ball genus and above by the Seifert genus. We give a lower bound for the concordance genus of K coming from the knot Floer complex of K. As an application, we prove that there are topologically slice knots with 4-ball genus equal to one and arbitrarily large concordance genus.

  19. Natural medicine: the genus Angelica.

    Science.gov (United States)

    Sarker, S D; Nahar, L

    2004-06-01

    More than 60 species of medicinal plants belong to the genus Angelica (Family: Apiaceae). Many of these species have long been used in ancient traditional medicine systems, especially in the far-east. Various herbal preparations containing Angelica species are available over-the-counter, not only in the far-eastern countries, but also in the western countries like USA, UK, Germany, etc. For centuries, many species of this genus, e.g. A. acutiloba, A. archangelica, A. atropupurea, A. dahurica, A. japonica, A. glauca, A. gigas, A. koreana, A. sinensis, A. sylvestris, etc., have been used traditionally as anti-inflammatory, diuretic, expectorant and diaphoretic, and remedy for colds, flu, influenza, hepatitis, arthritis, indigestion, coughs, chronic bronchitis, pleurisy, typhoid, headaches, wind, fever, colic, travel sickness, rheumatism, bacterial and fungal infections and diseases of the urinary organs. Active principles isolated from these plants mainly include various types of coumarins, acetylenic compounds, chalcones, sesquiterpenes and polysaccharides. This review evaluates the importance of the genus Angelica in relation to its traditional medicinal uses, alternative medicinal uses in the modern society and potential for drug development, and summarises results of various scientific studies on Angelica species or Angelica-containing preparations for their bioactivities including, antimicrobial, anticancer, antitumour, analgesic, anti-inflammatory, hepatoprotective, nephroprotective, etc.

  20. Biodiversity of the genus Cladophialophora

    Science.gov (United States)

    Badali, H.; Gueidan, C.; Najafzadeh, M.J.; Bonifaz, A.; van den Ende, A.H.G. Gerrits; de Hoog, G.S.

    2008-01-01

    Cladophialophora is a genus of black yeast-like fungi comprising a number of clinically highly significant species in addition to environmental taxa. The genus has previously been characterized by branched chains of ellipsoidal to fusiform conidia. However, this character was shown to have evolved several times independently in the order Chaetothyriales. On the basis of a multigene phylogeny (nucLSU, nucSSU, RPB1), most of the species of Cladophialophora (including its generic type C. carrionii) belong to a monophyletic group comprising two main clades (carrionii- and bantiana-clades). The genus includes species causing chromoblastomycosis and other skin infections, as well as disseminated and cerebral infections, often in immunocompetent individuals. In the present study, multilocus phylogenetic analyses were combined to a morphological study to characterize phenetically similar Cladophialophora strains. Sequences of the ITS region, partial Translation Elongation Factor 1-α and β-Tubulin genes were analysed for a set of 48 strains. Four novel species were discovered, originating from soft drinks, alkylbenzene-polluted soil, and infected patients. Membership of the both carrionii and bantiana clades might be indicative of potential virulence to humans. PMID:19287540

  1. CYANOBACTERIA OF THE GENUS PROCHLOROTHRIX

    Directory of Open Access Journals (Sweden)

    Alexander Vasilievich Pinevich

    2012-05-01

    Full Text Available Green cyanobacteria are distinguished from blue-green ones by the possession of a chlorophyll-containing light harvesting antenna. Three genera of green cyanobacteria, namely Acaryochloris, Prochlorococcus and Prochloron, are unicellular and of marine habitat; Prochlorococcus marinus attracts most attention due to its outstanding role in prime productivity. The fourth genus, Prochlorothrix, is represented by filamentous freshwater strains. Unlike the rest of green cyanobacteria, Prochlorothrix is paradoxically rare: it has been isolated from two European locations only. Taking into account fluctuating blooms, morphological resemblance with Planktothrix and Pseudanabaena, and unsuccessful enrichment of Prochlorothrix, the preferred strategy of search for this cyanobacterium is based on PCR with natural DNA and specific primers. This approach already demonstrates a broader distribution of Prochlorothrix: marker genes have been found in at least two additional locations. Despite the growing evidence for naturally occurring Prochlorothrix, there are only a few cultivated strains, and only one of them (PCC 9006 is claimed to be axenic. In multixenic cultures, Prochlorothrix is accompanied by heterotrophic bacteria, indicating a consortium-type association. The genus Prochlorothrix includes two species: P. hollandica and P. scandica based on distinctions in genomic DNA, cell size, temperature optimum, and fatty acid composition of membrane lipids. In this short review, the properties of cyanobacteria of the genus Prochlorothrix are described, and the evolutionary scenario of green cyanobacteria, especially taking into account their role in the origin of simple chloroplast is given.

  2. On genus expansion of superpolynomials

    Science.gov (United States)

    Mironov, Andrei; Morozov, Alexei; Sleptsov, Alexei; Smirnov, Andrey

    2014-12-01

    Recently it was shown that the (Ooguri-Vafa) generating function of HOMFLY polynomials is the Hurwitz partition function, i.e. that the dependence of the HOMFLY polynomials on representation R is naturally captured by symmetric group characters (cut-and-join eigenvalues). The genus expansion and expansion through Vassiliev invariants explicitly demonstrate this phenomenon. In the present paper we claim that the superpolynomials are not functions of such a type: symmetric group characters do not provide an adequate linear basis for their expansions. Deformation to superpolynomials is, however, straightforward in the multiplicative basis: the Casimir operators are β-deformed to Hamiltonians of the Calogero-Moser-Sutherland system. Applying this trick to the genus and Vassiliev expansions, we observe that the deformation is fully straightforward only for the thin knots. Beyond the family of thin knots additional algebraically independent terms appear in the Vassiliev and genus expansions. This can suggest that the superpolynomials do in fact contain more information about knots than the colored HOMFLY and Kauffman polynomials. However, even for the thin knots the beta-deformation is non-innocent: already in the simplest examples it seems inconsistent with the positivity of colored superpolynomials in non-(anti)symmetric representations, which also happens in I. Cherednik's (DAHA-based) approach to the torus knots.

  3. On genus expansion of superpolynomials

    International Nuclear Information System (INIS)

    Mironov, Andrei; Morozov, Alexei; Sleptsov, Alexei; Smirnov, Andrey

    2014-01-01

    Recently it was shown that the (Ooguri–Vafa) generating function of HOMFLY polynomials is the Hurwitz partition function, i.e. that the dependence of the HOMFLY polynomials on representation R is naturally captured by symmetric group characters (cut-and-join eigenvalues). The genus expansion and expansion through Vassiliev invariants explicitly demonstrate this phenomenon. In the present paper we claim that the superpolynomials are not functions of such a type: symmetric group characters do not provide an adequate linear basis for their expansions. Deformation to superpolynomials is, however, straightforward in the multiplicative basis: the Casimir operators are β-deformed to Hamiltonians of the Calogero–Moser–Sutherland system. Applying this trick to the genus and Vassiliev expansions, we observe that the deformation is fully straightforward only for the thin knots. Beyond the family of thin knots additional algebraically independent terms appear in the Vassiliev and genus expansions. This can suggest that the superpolynomials do in fact contain more information about knots than the colored HOMFLY and Kauffman polynomials. However, even for the thin knots the beta-deformation is non-innocent: already in the simplest examples it seems inconsistent with the positivity of colored superpolynomials in non-(anti)symmetric representations, which also happens in I. Cherednik's (DAHA-based) approach to the torus knots

  4. Origin of B chromosomes in Characidium alipioi (Characiformes, Crenuchidae) and its relationship with supernumerary chromosomes in other Characidium species

    OpenAIRE

    Freitas,Érica; Utsunomia,Ricardo; Sobrinho-Scudeler,Patrícia; Oliveira,Claudio; Foresti,Fausto

    2017-01-01

    Abstract B chromosomes are apparently dispensable components found in the genomes of many species that are mainly composed of repetitive DNA sequences. Among the numerous questions concerning B chromosomes, the origin of these elements has been widely studied. To date, supernumerary chromosomes have been identified in approximately 60 species of fish, including species of the genus Characidium Reinhardt, 1867 in which these elements appear to have independently originated. In this study, we u...

  5. A new species of Jainus (Monogenea, gill parasite of Schizodon borellii (Characiformes, Anostomidae from the upper Paraná river floodplain, Brazil - doi: 10.4025/actascibiolsci.v33i2.6168 A new species of Jainus (Monogenea, gill parasite of Schizodon borellii (Characiformes, Anostomidae from the upper Paraná river floodplain, Brazil - doi: 10.4025/actascibiolsci.v33i2.6168

    Directory of Open Access Journals (Sweden)

    Gilberto Cezar Pavanelli

    2011-05-01

    Full Text Available Jainus piava n. sp. is described from the gills of Schizodon borellii (Boulenger, 1900 (Characiform, commonly named as piava from the upper Paraná River floodplain, Brazil. The new species differs from the other members of Jainus in the following features: ventral bar thin broadly V-shaped and male copulatory organ (MCO a coil of about 1.5 rings. Jainus piava n. sp. is similar to species of Jainus by having a ventral anchor base with flattened superficial root and elongate rodlike deep root.Jainus piava n. sp. is described from the gills of Schizodon borellii (Boulenger, 1900 (Characiform, commonly named as piava from the upper Paraná River floodplain, Brazil. The new species differs from the other members of Jainus in the following features: ventral bar thin broadly V-shaped and male copulatory organ (MCO a coil of about 1.5 rings. Jainus piava n. sp. is similar to species of Jainus by having a ventral anchor base with flattened superficial root and elongate rodlike deep root.

  6. NSR superstring measures in genus 5

    International Nuclear Information System (INIS)

    Dunin-Barkowski, Petr; Sleptsov, Alexey; Stern, Abel

    2013-01-01

    Currently there are two proposed ansätze for NSR superstring measures: the Grushevsky ansatz and the OPSMY ansatz, which for genera g⩽4 are known to coincide. However, neither the Grushevsky nor the OPSMY ansatz leads to a vanishing two-point function in genus four, which can be constructed from the genus five expressions for the respective ansätze. This is inconsistent with the known properties of superstring amplitudes. In the present paper we show that the Grushevsky and OPSMY ansätze do not coincide in genus five. Then, by combining these ansätze, we propose a new ansatz for genus five, which now leads to a vanishing two-point function in genus four. We also show that one cannot construct an ansatz from the currently known forms in genus 6 that satisfies all known requirements for superstring measures

  7. 2+1 gravity for genus >1

    International Nuclear Information System (INIS)

    Nelson, J.E.; Regge, T.

    1991-01-01

    We analysed the algebra of observables for the simple case of a genus 1 initial data surface Σ 2 for 2+1 De Sitter gravity. Here we extend the analysis to higher genus. We construct for genus 2 the group of automorphisms H of the homotopy group π 1 induced by the mapping class group. The group H induces a group D of canonical transformations on the algebra of observables which is related to the braid group for 6 threads. (orig.)

  8. Integrable systems in the infinite genus limit

    OpenAIRE

    Gesztesy, Fritz

    2001-01-01

    We provide an elementary approach to integrable systems associated with hyperelliptic curves of infinite genus. In particular, we explore the extent to which the classical Burchnall-Chaundy theory generalizes in the infinite genus limit, and systematically study the effect of Darboux transformations for the KdV hierarchy on such infinite genus curves. Our approach applies to complex-valued periodic solutions of the KdV hierarchy and naturally identifies the Riemann surface familiar from stand...

  9. Origin of B chromosomes in Characidium alipioi (Characiformes, Crenuchidae) and its relationship with supernumerary chromosomes in other Characidium species.

    Science.gov (United States)

    Serrano, Érica Alves; Utsunomia, Ricardo; Scudeller, Patrícia Sobrinho; Oliveira, Claudio; Foresti, Fausto

    2017-01-01

    B chromosomes are apparently dispensable components found in the genomes of many species that are mainly composed of repetitive DNA sequences. Among the numerous questions concerning B chromosomes, the origin of these elements has been widely studied. To date, supernumerary chromosomes have been identified in approximately 60 species of fish, including species of the genus Characidium Reinhardt, 1867 in which these elements appear to have independently originated. In this study, we used molecular cytogenetic techniques to investigate the origin of B chromosomes in a population of Characidium alipioi Travassos, 1955 and determine their relationship with the extra chromosomes of other species of the genus. The results showed that the B chromosomes of Characidium alipioi had an intraspecific origin, apparently originated independently in relation to the B chromosomes of Characidium gomesi Travassos, 1956 Characidium pterostictum Gomes, 1947 and Characidium oiticicai Travassos, 1967, since they do not share specific DNA sequences, as well as their possible ancestral chromosomes and belong to different phylogenetic clades. The shared sequences between the supernumerary chromosomes and the autosommal sm pair indicate the origin of these chromosomes.

  10. Origin of B chromosomes in Characidium alipioi (Characiformes, Crenuchidae and its relationship with supernumerary chromosomes in other Characidium species

    Directory of Open Access Journals (Sweden)

    Érica Alves Serrano

    2017-01-01

    Full Text Available B chromosomes are apparently dispensable components found in the genomes of many species that are mainly composed of repetitive DNA sequences. Among the numerous questions concerning B chromosomes, the origin of these elements has been widely studied. To date, supernumerary chromosomes have been identified in approximately 60 species of fish, including species of the genus Characidium Reinhardt, 1867 in which these elements appear to have independently originated. In this study, we used molecular cytogenetic techniques to investigate the origin of B chromosomes in a population of Characidium alipioi Travassos, 1955 and determine their relationship with the extra chromosomes of other species of the genus. The results showed that the B chromosomes of C. alipioi had an intraspecific origin, apparently originated independently in relation to the B chromosomes of C. gomesi Travassos, 1956 C. pterostictum Gomes, 1947 and C. oiticicai Travassos, 1967, since they do not share specific DNA sequences, as well as their possible ancestral chromosomes and belong to different phylogenetic clades. The shared sequences between the supernumerary chromosomes and the autosommal sm pair indicate the origin of these chromosomes.

  11. A new species of Jainus (Monogenea, gill parasite of Schizodon borellii (Characiformes, Anostomidae from the upper Paraná river floodplain, Brazil = Uma nova espécie de Jainus (Monogenea, parasito de brânquias de Schizodon borellii (Characiformes, Anostomidae da planície de inundação do alto rio Paraná, Brasil

    Directory of Open Access Journals (Sweden)

    Letícia Cucolo Karling

    2011-04-01

    Full Text Available Jainus piava n. sp. is described from the gills of Schizodon borellii (Boulenger, 1900 (Characiform, commonly named as piava from the upper Paraná River floodplain, Brazil. The new species differs from the other members of Jainus in the following features: ventral bar thin broadly V-shaped and male copulatory organ (MCO a coil of about 1.5 rings. Jainus piava n. sp. is similar to species of Jainus by having a ventral anchor base with flattened superficial root and elongate rodlike deep root.Jainus piava sp. nov é descrito para brânquias de Schizodon borellii(Boulenger, 1900 (Chacariformes comumente chamado de piava na planície de inundação do alto rio Paraná, Brasil. A nova espécie difere de outros membros de Jainus pelas seguintes características: barra ventral fina levemente em forma de V e órgão copulatório masculino (MCO com cerca de uma volta e meia de diâmetro do anel. Jainus piava sp. nov é similar a outras espécies do gênero Jainus por ter a âncora ventral com uma raiz superficial com extensão alongada.

  12. THE GENUS TEIJSMANNIODENDRON KOORDERS (VERBENACEAE

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    A. J. G. H. KOSTERMANS

    2015-11-01

    Full Text Available 1. The present notes on Teijsmanniodendron are based on a study of the spec- imens from Herbarium Bogoriense and the Herbarium of the Singapore Botanic Garden. 2. The taxonomic value of the principal characters and their variation are discussed. Each of the species recognized is annotated. 3. A delimitation and subdivision of the genus in two sections,  Plurifoliolatae Kosterm.  and 'Unifoliolatae Kosterm  is proposed. 4. A key to the 12 species and 1 variety distinguished, is included. 5. One new species is provisionally described (but not named, and one new variety, Teijsmanniodendron pteropodum var. auriculatum Kosterm, is published. 6. The following new combinations are made: Teijsmanniodendron coriaceum B. Clarke Kosterm,, T. hollrungii (Warb. Kosterm. T. holophyllum (Bak. Kos- term, T.novoguineense (Kan. & Hatus. Kosterm., T. sarawakanum (H. H. W. Pears. Kosterm., T. smilacifolium (H. H. W. Pears. Kosterm., and T. subspieatum (Hallier f. Kosterm. 7. The genus Xerocarpa H. 3. Lam (non Spach is rejected; its only species, X. avicenniaefoliola H. J. Lam, is referred to Teijsmanniodendron ahernianum (Merr. Bakh. In addition, the following reductions are made: Teijsmanniodendron mono- phyllum Kurata = T. hollrungii (Warb. Kosterm.; Vitex bankae H. J. Lam = T. ahernianum (Merr. Bakh., V. bogoriensis H. J. Lam = T. ahernianum (Merr. Bakh.; V. koordersii H. J. Lam t= T. pteropodum (Miq. Bakh.; V. tetragona Hallier f. = T. sarawakanum (H. H. W. Pears. Kosterm.; V. venosa H. J. Lam = T. coriaceum (C. B. Clarke Kosterm. Possible identity of T. longifolium (Merr. Merr. and T. bogoriense is suggested: the identity of T. simplicifolium Merr. and T. smilacifolium (H. H-, W. Pears. Kosterm. is indicated as probable. 8. Vitex subspicata Hallier f. and V. holophylla Bak. included by Lam in vitex hollrungii Warb. are reinstated as distinct species of Teijsmanniodendron.

  13. Evolution of the Genus Homo

    Science.gov (United States)

    Tattersall, Ian; Schwartz, Jeffrey H.

    2009-05-01

    Definition of the genus Homo is almost as fraught as the definition of Homo sapiens. We look at the evidence for “early Homo,” finding little morphological basis for extending our genus to any of the 2.5-1.6-myr-old fossil forms assigned to “early Homo” or Homo habilis/rudolfensis. We also point to heterogeneity among “early African Homo erectus,” and the lack of apomorphies linking these fossils to the Asian Homo erectus group, a cohesive regional clade that shows some internal variation, including brain size increase over time. The first truly cosmopolitan Homo species is Homo heidelbergensis, known from Africa, Europe, and China following 600 kyr ago. One species sympatric with it included the >500-kyr-old Sima de los Huesos fossils from Spain, clearly distinct from Homo heidelbergensis and the oldest hominids assignable to the clade additionally containing Homo neanderthalensis. This clade also shows evidence of brain size expansion with time; but although Homo neanderthalensis had a large brain, it left no unequivocal evidence of the symbolic consciousness that makes our species unique. Homo sapiens clearly originated in Africa, where it existed as a physical entity before it began (also in that continent) to show the first stirrings of symbolism. Most likely, the biological underpinnings of symbolic consciousness were exaptively acquired in the radical developmental reorganization that gave rise to the highly characteristic osteological structure of Homo sapiens, but lay fallow for tens of thousands of years before being “discovered” by a cultural stimulus, plausibly the invention of language.

  14. Revision of the African genus Annickia (Annonaceae)

    NARCIS (Netherlands)

    Versteegh, C.P.C.; Sosef, M.S.M.

    2007-01-01

    complete revision, including a key to the species, drawings and distribution maps, of the tropical African Annonaceae genus Annickia (= Enantia Oliv., non Falc.) is presented. The exact phylogenetic position of this genus within the family has long been, and in fact still is, unclear. The status of

  15. Typification of the genus Macropsidium Bl. (Myrtaceae)

    NARCIS (Netherlands)

    Steenis, van C.G.G.J.

    1971-01-01

    In revising Myrtaceae Blume correctly concluded in 1849 that Psidium rubrum Lour, from Indo-China could not belong to that neotropical genus. He erected a new genus Macropsidium Bl., to accommodate it, adding at the same time the description of a second new species from the Moluccas. It is desirable

  16. A revision of the genus Dillenia

    NARCIS (Netherlands)

    Hoogland, R.D.

    1952-01-01

    The present paper is an extension of my revision of the Malaysian species of the genus Dillenia L. (Wormia Rottb. included) inserted in the revision of the Dilleniaceae in the Flora Malesiana ser. I, vol. 4, part 3, pp. 141—174, published in December 1951. A critical revision of the whole genus has

  17. Phenetic relationships in the genus Myotis

    NARCIS (Netherlands)

    Findley, James S.

    1970-01-01

    The genus Myotis is of interest to the evolutionist because of its diversity and because of its nearly cosmopolitan distribution. An understanding of the biology of this remarkable genus may provide insight into its success, as well as the success of other expansive groups of mammals. As part of an

  18. Oligosarcus jacuiensis (Characiformes: Characidae, a new species from the Uruguay and Jacuí River basins, southern Brazil

    Directory of Open Access Journals (Sweden)

    Naércio Aquino Menezes

    Full Text Available The new species herein described, collected in the Jacuí and Uruguay River basins, Rio Grande do Sul, Brazil, can be distinguished from the already known species of the genus, but Oligosarcus jenynsii, O. perdido, O. acutirostris, O. solitarius and O. hepsetus, by the number of perforated lateral line scales. It shares with the first two species the absence of a premaxillary foramen, present in the last three species and differs from O. jenynsii by having a smaller orbital diameter and the tip of the pectoral fin failing to reach the pelvic-fin origin, and from O. perdido by the presence of more horizontal scale rows around the caudal peduncle.

  19. A new species of Tyttocharax (Characiformes: Characidae: Stevardiinae from the Güejar river, Orinoco river Basin, Colombia

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    César Román-Valencia

    Full Text Available A new Tyttocharax species from the Güejar River system, near the Macarena Mountains in Colombia is described. This is the first record for the genus from the Orinoco basin. The combination of the following characters distinguish Tyttocharax metae from its congeners: presence of bony hooks on the pectoral and caudal-fin rays; bony hooks on the anal-fin rays larger than those on the pelvic-fin rays; pectoral-fin rays i,5-6,i; presence of three unbranched dorsal-fin rays; absence of an adipose fin; four scales rows between the anal-fin origin and the lateral line; and four scale rows between the pelvic-fin and the lateral line. Ecological characteristics of the habitat of the new species are also presented.

  20. The elliptic genus and Hidden symmetry

    International Nuclear Information System (INIS)

    Jaffe, A.

    2001-01-01

    We study the elliptic genus (a partition function) in certain interacting, twist quantum field theories. Without twists, these theories have N=2 supersymmetry. The twists provide a regularization, and also partially break the supersymmetry. In spite of the regularization, one can establish a homotopy of the elliptic genus in a coupling parameter. Our construction relies on a priori estimates and other methods from constructive quantum field theory; this mathematical underpinning allows us to justify evaluating the elliptic genus at one endpoint of the homotopy. We obtain a version of Witten's proposed formula for the elliptic genus in terms of classical theta functions. As a consequence, the elliptic genus has a hidden SL(2,Z) symmetry characteristic of conformal theory, even though the underlying theory is not conformal. (orig.)

  1. Higher rank BN-theory for curves of genus 4

    OpenAIRE

    Lange, H.; Newstead, P. E.

    2015-01-01

    Higher rank Brill-Noether theory is completely known for curves of genus $\\leq 3$. In this paper, we investigate the theory for curves of genus 4. Some of our results apply to curves of arbitrary genus.

  2. Genomic Diversity in the Genus of Aspergillus

    DEFF Research Database (Denmark)

    Rasmussen, Jane Lind Nybo

    Aspergillus is a highly important genus of saprotrophic filamentous fungi. It is a very diverse genus that is inextricably intertwined with human a↵airs on a daily basis, holding species relevant to plant and human pathology, enzyme and bulk chemistry production, food and beverage biotechnology......, and scientific model organisms. The phenotypic diversity in this genus is extraordinary and identifying the genetic basis for this diversity has great potential for academia and industry. When the genomic era began for Aspergillus in 2005 with the genome sequences of A. nidulans, A. oryzae and A. fumigatus...

  3. Infinite genus surfaces and irrational polygonal billiards

    OpenAIRE

    Valdez, Ferrán

    2009-01-01

    We prove that the natural invariant surface associated with the billiard game on an irrational polygonal table is homeomorphic to the Loch Ness monster, that is, the only orientable infinite genus topological real surface with exactly one end.

  4. Genus Pouteria: chemistry and biological activity

    Directory of Open Access Journals (Sweden)

    Cíntia A. M. Silva

    Full Text Available The genus Pouteria belongs to the family Sapotaceae and can be widely found around the World. These plants have been used as building material, as food, because the eatable fruits, as well as remedies in folk medicine. Some biological activities have been reported to species of this genus such as antioxidant, anti-inflammatory, antibacterial and antifungal. However, the real potential of this genus as source of new drugs or phytomedicines remains unknown. Therefore, a review of the so far known chemical composition and biological activities of this genus is presented to stimulate new studies about the species already reported moreover that species have no reference about chemistry or biological activities could be found until now.

  5. Phylogeny and taxonomy of the genus Gliocephalotrichum

    NARCIS (Netherlands)

    Lombard, L.; Serrato-Diaz, L. M.; Cheewangkoon, R.; French-Monar, R. D.; Decock, C.; Crous, P. W.

    Species in the genus Gliocephalotrichum (= Leuconectria) (Hypocreales, Nectriaceae) are soilborne fungi, associated with post-harvest fruit spoilage of several important tropical fruit crops. Contemporary taxonomic studies of these fungi have relied on morphology and DNA sequence comparisons of the

  6. Phylogeny and taxonomy of the genus Gliocephalotrichum

    NARCIS (Netherlands)

    Lombard, L.; Serrato-Diaz, L.M.; Cheewangkoon, R.; French-Monar, R.D.; Decock, C.; Crous, P.W.

    2014-01-01

    Species in the genus Gliocephalotrichum (= Leuconectria) (Hypocreales, Nectriaceae) are soilborne fungi, associated with post-harvest fruit spoilage of several important tropical fruit crops. Contemporary taxonomic studies of these fungi have relied on morphology and DNA sequence comparisons of the

  7. Cladistic relationships within the genus Cinnamomum (Lauraceae ...

    African Journals Online (AJOL)

    Cladistic relationships within the genus Cinnamomum (Lauraceae) in Taiwan based on analysis of leaf morphology and inter-simple sequence repeat (ISSR) and internal transcribed spacer (ITS) molecular markers.

  8. Revision of the African genus Uvariastrum (Annonaceae).

    Science.gov (United States)

    Couvreur, Thomas L P

    2014-01-01

    The genus Uvariastrum (Annonaceae) is restricted to continental Africa and is characterized by sepals with folded margins, few carpels and numerous stamens. The genus is mainly found in the tropical lowland rain forests of Africa, with one species growing in a drier woodland habitat. The species name Uvariastrum pynaertii De Wild is reduced into synonymy with Uvariastrum zenkeri Engl. & Diels. Uvaraistrum neglectum Paiva and Uvariastrum modestum Dielsare transferred to the genus Uvaria leading to two new combinations: Uvaria modesta (Diels) Couvreur, comb. nov. and Uvaria paivana Couvreur, nom. nov. Five species are currently recognized in Uvariastrum. The present revision, the first of the genus for over 100 years, provides an overview of previously published information and discussions on morphology, taxonomy and palynology. Preliminary conservation status assessments are provided for each species, as well as diagnostic keys for fruiting and flowering material as well as detailed species descriptions. Furthermore, all species are illustrated by line drawings and all species are mapped.

  9. Witten Genus and String Complete Intersections

    OpenAIRE

    Chen, Qingtao; Han, Fei

    2006-01-01

    In this note, we prove that the Witten genus of nonsingular string complete intersections in product of complex projective spaces vanishes. Our result generalizes a known result of Landweber and Stong (cf. [HBJ]).

  10. The genus Hafnia: from soup to nuts.

    Science.gov (United States)

    Janda, J Michael; Abbott, Sharon L

    2006-01-01

    The genus Hafnia, a member of the family Enterobacteriaceae, consists of gram-negative bacteria that are occasionally implicated in both intestinal and extraintestinal infections in humans. Despite the fact that the genus currently contains only a single species (H. alvei), more extensive phylogenetic depth (two or more species) is apparent based upon DNA relatedness and 16S rRNA gene sequencing studies. Hafnia causes a variety of systemic infections, including septicemia and pneumonia; however, its role as a gastrointestinal pathogen is controversial. Many of the data supporting a role for hafniae as enteric pathogens were incorrectly attributed to this genus rather than to the actual pathogen, Escherichia albertii. There are numerous gaps in our understanding of this genus, including ecologic habitats and population genetics, disease-producing role in animals, phenetic and genetic methods useful in distinguishing genomospecies within the H. alvei complex, and bona fide pathogenicity factors.

  11. Leucosphaera, a new genus of the Pseudeurotiaceae

    NARCIS (Netherlands)

    Arx, von J.A.; Mukerji, K.G.; Singh, N.

    1978-01-01

    In the course of a study of herbivore dung collected in the Zoological Garden in Delhi, an ascomycete was observed and isolated which could not be accomodated in any known genus. It is therefore described below.

  12. A Brief Chronicle of the Genus Cordyceps Fr., the Oldest Valid Genus in Cordycipitaceae (Hypocreales, Ascomycota)

    OpenAIRE

    Shrestha, Bhushan; Tanaka, Eiji; Han, Jae-Gu; Oh, Junsang; Han, Sang-Kuk; Lee, Kang-Hyo; Sung, Gi-Ho

    2014-01-01

    The earliest pre-Linnaean fungal genera are briefly discussed here with special emphasis on the nomenclatural connection with the genus Cordyceps Fr. Since its valid publication under the basidiomycetous genus Clavaria Vaill. ex L. (Clavaria militaris L. Sp. Pl. 2:1182, 1753), the genus Cordyceps has undergone nomenclatural changes in the post-Linnaean era, but has stood firmly for approximately 200 years. Synonyms of Cordyceps were collected from different literature sources and analyzed bas...

  13. Kops genus - en værkstedsrapport

    DEFF Research Database (Denmark)

    Gudiksen, Asgerd

    2008-01-01

     Inden for Ømålsområdet optræder ordet kop både i genus femininum, masku­linum og neutrum. På Sjælland, hvor trekønssystemet er under af­vikling, kan ordet desuden være genus commune. Der kan konstateres en vis dialektgeografisk fordeling af de tre (fire) genera, men især på Sjælland er...

  14. Remarks on superstring amplitudes in higher genus

    International Nuclear Information System (INIS)

    Salvati Manni, Riccardo

    2008-01-01

    Very recently, Grushevsky continued D'Hoker and Phong's program of finding the chiral superstring measure from first principles by constructing modular forms satisfying certain factorization constraints. He has proposed an ansatz in genus 4 and conjectured a possible formula for the superstring measure in any genus, subject to the condition that certain modular forms admit holomorphic roots. In this note we want to give some evidence that Grushevsky's approach seems to be very fruitful

  15. The Genus Hafnia: from Soup to Nuts

    OpenAIRE

    Janda, J. Michael; Abbott, Sharon L.

    2006-01-01

    The genus Hafnia, a member of the family Enterobacteriaceae, consists of gram-negative bacteria that are occasionally implicated in both intestinal and extraintestinal infections in humans. Despite the fact that the genus currently contains only a single species (H. alvei), more extensive phylogenetic depth (two or more species) is apparent based upon DNA relatedness and 16S rRNA gene sequencing studies. Hafnia causes a variety of systemic infections, including septicemia and pneumonia; howev...

  16. Histochemical and morphological features of biopsied and stripped oocytes from the Brazilian endangered teleost pirapitinga, Brycon nattereri (Characiformes).

    Science.gov (United States)

    Maria, Alexandre N; Orfão, Laura H; Rizzo, Elizete; Ninhaus-Silveira, Alexandre; Viveiros, Ana T M

    2015-06-01

    The aim of the present study was to characterize biopsied and stripped oocytes from the Brazilian endangered teleost pirapitinga (Brycon nattereri) using histochemical and morphological analyses. Biopsied oocytes had a mean diameter of 2.225 mm (modal diameter: 2.312 mm), complete vitellogenesis and a central or slightly eccentric nucleus. Neutral polysaccharides were detected in the follicular cells, zona radiata and yolk globules, while acidic polysaccharides were detected in the follicular cells and cortical alveoli. Ten out of the 19 females treated with two doses of carp pituitary extract (cPE) released oocytes, which were also analysed. Stripping occurred 292 ± 39 degree-hours after the second dose of cPE and led to a mean spawning weight of 36.2 g, 10% spawning index, 241 oocytes/g of ova, 8222 oocytes/female and 23 oocytes/g of body weight. Stripped oocytes had a mean diameter of 2.33 mm and a mode at 2.375 mm, were weakly adhesive and coloration ranged from wine to brown. Under scanning electron microscopy, stripped oocytes exhibited a single funnel-shaped micropyle located at the animal pole and a zona radiata that measured 7.7 μm in thickness with eight pore canals/μm2. Oocyte morphology in Brycon nattereri is similar to that found in other species of the genus, except for the larger size and weaker adhesiveness. These findings provide essential information for a better understanding of the reproductive biology of B. nattereri and the establishment of conservation measures for this threatened species.

  17. Genomic diversity within the haloalkaliphilic genus Thioalkalivibrio.

    Directory of Open Access Journals (Sweden)

    Anne-Catherine Ahn

    Full Text Available Thioalkalivibrio is a genus of obligate chemolithoautotrophic haloalkaliphilic sulfur-oxidizing bacteria. Their habitat are soda lakes which are dual extreme environments with a pH range from 9.5 to 11 and salt concentrations up to saturation. More than 100 strains of this genus have been isolated from various soda lakes all over the world, but only ten species have been effectively described yet. Therefore, the assignment of the remaining strains to either existing or novel species is important and will further elucidate their genomic diversity as well as give a better general understanding of this genus. Recently, the genomes of 76 Thioalkalivibrio strains were sequenced. On these, we applied different methods including (i 16S rRNA gene sequence analysis, (ii Multilocus Sequence Analysis (MLSA based on eight housekeeping genes, (iii Average Nucleotide Identity based on BLAST (ANIb and MUMmer (ANIm, (iv Tetranucleotide frequency correlation coefficients (TETRA, (v digital DNA:DNA hybridization (dDDH as well as (vi nucleotide- and amino acid-based Genome BLAST Distance Phylogeny (GBDP analyses. We detected a high genomic diversity by revealing 15 new "genomic" species and 16 new "genomic" subspecies in addition to the ten already described species. Phylogenetic and phylogenomic analyses showed that the genus is not monophyletic, because four strains were clearly separated from the other Thioalkalivibrio by type strains from other genera. Therefore, it is recommended to classify the latter group as a novel genus. The biogeographic distribution of Thioalkalivibrio suggested that the different "genomic" species can be classified as candidate disjunct or candidate endemic species. This study is a detailed genome-based classification and identification of members within the genus Thioalkalivibrio. However, future phenotypical and chemotaxonomical studies will be needed for a full species description of this genus.

  18. Genomic diversity within the haloalkaliphilic genus Thioalkalivibrio

    Science.gov (United States)

    Ahn, Anne-Catherine; Meier-Kolthoff, Jan P.; Overmars, Lex; Richter, Michael; Woyke, Tanja; Sorokin, Dimitry Y.

    2017-01-01

    Thioalkalivibrio is a genus of obligate chemolithoautotrophic haloalkaliphilic sulfur-oxidizing bacteria. Their habitat are soda lakes which are dual extreme environments with a pH range from 9.5 to 11 and salt concentrations up to saturation. More than 100 strains of this genus have been isolated from various soda lakes all over the world, but only ten species have been effectively described yet. Therefore, the assignment of the remaining strains to either existing or novel species is important and will further elucidate their genomic diversity as well as give a better general understanding of this genus. Recently, the genomes of 76 Thioalkalivibrio strains were sequenced. On these, we applied different methods including (i) 16S rRNA gene sequence analysis, (ii) Multilocus Sequence Analysis (MLSA) based on eight housekeeping genes, (iii) Average Nucleotide Identity based on BLAST (ANIb) and MUMmer (ANIm), (iv) Tetranucleotide frequency correlation coefficients (TETRA), (v) digital DNA:DNA hybridization (dDDH) as well as (vi) nucleotide- and amino acid-based Genome BLAST Distance Phylogeny (GBDP) analyses. We detected a high genomic diversity by revealing 15 new “genomic” species and 16 new “genomic” subspecies in addition to the ten already described species. Phylogenetic and phylogenomic analyses showed that the genus is not monophyletic, because four strains were clearly separated from the other Thioalkalivibrio by type strains from other genera. Therefore, it is recommended to classify the latter group as a novel genus. The biogeographic distribution of Thioalkalivibrio suggested that the different “genomic” species can be classified as candidate disjunct or candidate endemic species. This study is a detailed genome-based classification and identification of members within the genus Thioalkalivibrio. However, future phenotypical and chemotaxonomical studies will be needed for a full species description of this genus. PMID:28282461

  19. Genomic diversity within the haloalkaliphilic genus Thioalkalivibrio.

    Science.gov (United States)

    Ahn, Anne-Catherine; Meier-Kolthoff, Jan P; Overmars, Lex; Richter, Michael; Woyke, Tanja; Sorokin, Dimitry Y; Muyzer, Gerard

    2017-01-01

    Thioalkalivibrio is a genus of obligate chemolithoautotrophic haloalkaliphilic sulfur-oxidizing bacteria. Their habitat are soda lakes which are dual extreme environments with a pH range from 9.5 to 11 and salt concentrations up to saturation. More than 100 strains of this genus have been isolated from various soda lakes all over the world, but only ten species have been effectively described yet. Therefore, the assignment of the remaining strains to either existing or novel species is important and will further elucidate their genomic diversity as well as give a better general understanding of this genus. Recently, the genomes of 76 Thioalkalivibrio strains were sequenced. On these, we applied different methods including (i) 16S rRNA gene sequence analysis, (ii) Multilocus Sequence Analysis (MLSA) based on eight housekeeping genes, (iii) Average Nucleotide Identity based on BLAST (ANIb) and MUMmer (ANIm), (iv) Tetranucleotide frequency correlation coefficients (TETRA), (v) digital DNA:DNA hybridization (dDDH) as well as (vi) nucleotide- and amino acid-based Genome BLAST Distance Phylogeny (GBDP) analyses. We detected a high genomic diversity by revealing 15 new "genomic" species and 16 new "genomic" subspecies in addition to the ten already described species. Phylogenetic and phylogenomic analyses showed that the genus is not monophyletic, because four strains were clearly separated from the other Thioalkalivibrio by type strains from other genera. Therefore, it is recommended to classify the latter group as a novel genus. The biogeographic distribution of Thioalkalivibrio suggested that the different "genomic" species can be classified as candidate disjunct or candidate endemic species. This study is a detailed genome-based classification and identification of members within the genus Thioalkalivibrio. However, future phenotypical and chemotaxonomical studies will be needed for a full species description of this genus.

  20. The genus Isodon (Schrad. ex Benth. Spach in Africa and a new genus Rabdosiella Codd (Lamiaceae

    Directory of Open Access Journals (Sweden)

    L. E. Codd

    1984-12-01

    Full Text Available The typification of the genus Isodon (Schrad. ex Benth. Spach and its occurrence in Africa are discussed; an allied genus Rabdosiella Codd is described and the combinations R. calycina (Benth. Codd and R. ternifolia (D.Don Codd (the latter an Indian species are effected.

  1. Taxonomy and Chemotaxonomy of the Genus Hypericum.

    Science.gov (United States)

    Crockett, Sara L; Robson, Norman K B

    2011-01-01

    The genus Hypericum L. (St. John's Wort, Hypericaceae) includes, at the most recent count, 469 species that are either naturally occurring on, or which have been introduced to, every continent in the world, except Antarctica. These species occur as herbs, shrubs, and infrequently trees, and are found in a variety of habitats in temperate regions and in high mountains in the tropics, avoiding only zones of extreme aridity, temperature and/or salinity. Monographic work on the genus has resulted in the recognition and description of 36 taxonomic sections, delineated by specific combinations of morphological characteristics and biogeographic distribution ranges. Hypericum perforatum L. (Common St. John's wort, section Hypericum), one of the best-known members of the genus, is an important medicinal herb of which extracts are taken for their reported activity against mild to moderate depression. Many other species have been incorporated in traditional medicine systems in countries around the world, or are sold as ornamentals. Several classes of interesting bioactive secondary metabolites, including naphthodianthrones (e.g. hypericin and pseudohypericin), flavonol glycosides (e.g. isoquercitrin and hyperoside), biflavonoids (e.g. amentoflavone), phloroglucinol derivatives (e.g. hyperforin and adhyperforin) and xanthones have been identified from members of the genus. A general overview of the taxonomy of the genus and the distribution of relevant secondary metabolites is presented.

  2. Una nueva especie de Hyphessobrycon (Characiformes: Characidae de la cuenca del río Telembí, vertiente sur del Pacífico, Colombia

    Directory of Open Access Journals (Sweden)

    Carlos A. García-Alzate

    2013-03-01

    Full Text Available El género Hyphessobrycon, se incluye dentro de la subfamilia Tetragonopterinae. Las especies generalmente son pequeñas, no sobrepasan los 70mm de longitud estándar, son importantes económicamente como peces ornamentales, con 128 especies validas que se distribuyen desde el sur de México hasta Río de La Plata en Argentina. Se describe una nueva especie de Hyphessobrycon (Characiformes: Characidae de la cuenca del río Barbacoas, vertiente sur del Pacífico, Colombia, Hyphessobrycon chocoensis de la cuenca del río Telembí, vertiente del Pacífico Colombiano. Las recolectas de los peces fueron realizadas con redes de arrastres y se hicieron en un solo biotopo, zona litoral de remanso y a favor de la corriente. Las medidas de los ejemplares se tomaron punto a punto con un calibrador digital Las observaciones de estructuras óseas y cartílagos se hicieron sobre ejemplares clareados y teñidos (C&T. Las relaciones morfométricas entre especies fueron exploradas empleando 21 variables mediante un análisis de componentes principales (ACP. La nueva especie de Hyphessobrycon, H. chocoensis se distingue de sus congéneres no miembros del grupo flammeus por tener una mancha humeral difusa, no tener una mancha oscura en la aleta dorsal o en el pedúnculo caudal. Se distingue de las demás especies del grupo por el número de radios de la aleta dorsal (ii, 8, i, por el número de radios ramificados en la aleta anal (25-26 y por presentar la mancha humeral difusa, se diferencia de H. tortuguerae por el número de dientes en el maxilar (1-2, por el número de escamas pre- dorsales (10-12 y un alto número de escamas entre la línea lateral y la aleta anal (6-7. Hyphessobrycon chocoensis se puede separar de todos los otros Hyphessobrycon conocidos de las cuencas del Pacifico Colombiano por presentar: un alto número de escamas con poros en la línea lateral, por la longitud hocico-aleta dorsal, por la profundidad del pedúnculo caudal y por el di

  3. Caracterización de la diversidad genética en el pez Brycon henni (Characiformes: Characidae en Colombia central por medio de marcadores RAPD

    Directory of Open Access Journals (Sweden)

    Hermes Pineda Santis

    2007-12-01

    natural.Characterization of the genetic diversity of the fish Brycon henni (Characiformes: Characidae in central Colombia with RAPD markers. Knowledge on the genetic diversity of wild fish species is essential for conservation and appropriate management of individuals in repopulation programs. In Colombia, Brycon henni has been reported in the Magdalena and Cauca river basins, but the population and range have diminished as a consequence of anthropic activities. In this study, the Random Amplified Polymorphic DNA (RAPD was used to estimate the actual genetic structure in this species. For the purpose, six sample sites located in the department of Antioquia (Central Chain Mountains of Colombia were used. Thirty five primers (87.5 %, out of forty used, yielded 1 466 reliable and consistent fragments; 417 were considered as unique fragments able to discriminate among the Magdalena (Humarada-1 and Humarada-2 and Cauca (Piedras, La Clara y Guaracú river basins samples, suggesting that each is a discrete unit. This diversity suggests that anthropic effects of over fishing, dam building, deforestation and water pollution, have contributed to the isolation of these fish groups on the high mountains. Brycon moorei and Colossoma macropomum, as an interspecific control groups, were placed out of the B. henni general group, confirming their taxonomic classification through morphologic data. The RAPD technique was useful to know the genetic diversity and to discriminate among B. henni populations from different geographic origins, as a basis for an appropriate plan of repopulation, conservation and wildlife management. Rev. Biol. Trop. 55 (3-4: 1025-1035. Epub 2007 December, 28.

  4. The genus Gymnospermium (Berberidaceae) in the Balkans

    DEFF Research Database (Denmark)

    Tan, Kit; Shuka, Lulezim; Siljak-Yakovlev, Sonja

    2011-01-01

    A revision of the genus Gymnospermium (Berberidaceae) in the Balkan Peninsula is carried out. Three species are recognised. Gymnospermium maloi is described as a new species from Mt. Picari in Gjirokastra district, southern Albania. It is compared with the closely related G. scipetarum which has...... has been reported for other members of the genus. The nuclear DNA content (2C-value) of all three species was determined. The genome size of G. maloi is 29.44 (± 0.47) pg, for G. scipetarum (chromosome number still unknown) 29.55 (± 1.35) pg, and for G. peloponnesiacum (2n = 2x = 16) 31.93 (± 2.38) pg....... These values are the first genome size measurements for the genus. All three species are mapped and fully illustrated. A key to the European species is also presented....

  5. Revision of monotypic genus Llavea (Cryptogrammoideae: Pteridaceae

    Directory of Open Access Journals (Sweden)

    Mónica Palacios-Rios

    2016-12-01

    Full Text Available Llavea Lag. is a genus of Cryptogrammoideae (Pteridaceae, whose only species is distributed from southern United States and Mexico to Guatemala and Costa Rica, although it lives mainly in Mesoamerica, inhabiting preferably calcicolous habitats associated with forests and mountains. The genus is easily recognized by the presence of fertile leaves hemi-dimorphic, with the fertile apical portion with longer and narrower segments than the sterile ones, with strongly revolute margin, and rhizome scales bicolorous, shiny, and black. This paper presents a revision of the genus, nomenclatural issues are resolved, and and palynological morphological diversity are reviewed, as well as its distribution, phenology, ecology, and applications, based on field and herbarium specimens studies. In addition, two names related to Llavea, Allosorus karwinskii Kunze and Ceratodactylis osmundioides J. Sm., were lectotypified.

  6. The genus curve of the Abell clusters

    Science.gov (United States)

    Rhoads, James E.; Gott, J. Richard, III; Postman, Marc

    1994-01-01

    We study the topology of large-scale structure through a genus curve measurement of the recent Abell catalog redshift survey of Postman, Huchra, and Geller (1992). The structure is found to be spongelike near median density and to exhibit isolated superclusters and voids at high and low densities, respectively. The genus curve shows a slight shift toward 'meatball' topology, but remains consistent with the hypothesis of Gaussian random phase initial conditions. The amplitude of the genus curve corresponds to a power-law spectrum with index n = 0.21(sub -0.47 sup +0.43) on scales of 48/h Mpc or to a cold dark matter power spectrum with omega h = 0.36(sub -0.17 sup +0.46).

  7. Identification and nomenclature of the genus Penicillium

    DEFF Research Database (Denmark)

    Visagie, C.M.; Houbraken, J.; Frisvad, Jens Christian

    2014-01-01

    Penicillium is a diverse genus occurring worldwide and its species play important roles as decomposers of organic materials and cause destructive rots in the food industry where they produce a wide range of mycotoxins. Other species are considered enzyme factories or are common indoor air allergens....... Although DNA sequences are essential for robust identification of Penicillium species, there is currently no comprehensive, verified reference database for the genus. To coincide with the move to one fungus one name in the International Code of Nomenclature for algae, fungi and plants, the generic concept...... of accepted species in Penicillium. The genus currently contains 354 accepted species, including new combinations for Aspergillus crystallinus, A. malodoratus and A. paradoxus, which belong to Penicillium section Paradoxa. To add to the taxonomic value of the list, we also provide information on each accepted...

  8. Therapeutic value of the genus Alpinia, Zingiberaceae

    Directory of Open Access Journals (Sweden)

    Cristiane P. Victório

    2011-02-01

    Full Text Available Plants containing bioactive substances have increasingly become the object of research studies, particularly those plants with therapeutic value. Many species of the genus Alpinia provide a variety of medicinal properties, such as, Alpinia zerumbet (Pers. Burtt et Smith and A. purpurata (Vieill K. Schum, which have a significant presence in Brazil. These species have been commercialized in the food and cosmetic industries. However, their greatest importance arises from the medicinal properties of their essential oils containing flavonoids, terpenoids and kavalactones which have been used in folk medicine to treat, for example, arterial hypertension and inflammatory processes. In addition, such species are also used in multidisciplinary studies, including phytochemistry, ethnobotany and biology, indicating the key pharmacological role of this genus in everyday life. Therefore, this work aims to present a bibliographic review of the genus Alpinia and its significance in therapeutic applications.

  9. Polyphasic taxonomy of the genus Talaromyces

    DEFF Research Database (Denmark)

    Yilmaz, N.; Visagie, C.M.; Houbraken, J.

    2014-01-01

    The genus Talaromyces was described by Benjamin in 1955 as a sexual state of Penicillium that produces soft walled ascomata covered with interwoven hyphae. Phylogenetic information revealed that Penicillium subgenus Biverticillium and Talaromyces form a monophyletic clade distinct from the other...... a monograph on Talaromyces applying a polyphasic species concept, including morphological, molecular and physiological characters. Based on an ITS, BenA and RPB2 multigene phylogeny, we propose a new sectional classification for the genus, placing the 88 accepted species into seven sections, named sections...

  10. Some genus 3 curves with many points

    NARCIS (Netherlands)

    Auer, R; Top, J; Fieker, C; Kohel, DR

    2002-01-01

    We explain a naive approach towards the problem of finding genus 3 curves C over any given finite field F-q of odd characteristic, with a number of rational points close to the Hasse-Weil-Serre upper bound q+1+3[2rootq]. The method turns out to be successful at least in characteristic 3.

  11. The genus Gymnospermium (Berberidaceae) in the Balkans

    DEFF Research Database (Denmark)

    Tan, Kit; Shuka, Lulezim; Siljak-Yakovlev, Sonja

    2011-01-01

    A revision of the genus Gymnospermium (Berberidaceae) in the Balkan Peninsula is carried out. Three species are recognised. Gymnospermium maloi is described as a new species from Mt. Picari in Gjirokastra district, southern Albania. It is compared with the closely related G. scipetarum which has...

  12. The genus Malassezia and human disease

    Directory of Open Access Journals (Sweden)

    Inamadar A

    2003-07-01

    Full Text Available Sabouraud's Pityrosporum is now recognized as Malassezia. With taxonomic revision of the genus, newer species have been included. The role of this member of the normal human skin flora in different cutaneous and systemic disorders is becoming clearer. The immunological responses it induces in the human body are conflicting and their relevance to clinical features is yet to be explored.

  13. Thermoregulation of the subterranean rodent genus Bathyergus ...

    African Journals Online (AJOL)

    The thermoregulation of the largest subterranean rodent, genus Bathyergus, comprising two species, B. suillus and B. janetta,occurring in mesic and semiarid habitats respectively, was investigated and compared with that of other subterranean rodents. Both species display low resting metabolic rates and low body ...

  14. Phytochemical and Pharmacological Properties of the Genus ...

    African Journals Online (AJOL)

    Melodinus is an important genus comprising of approximately 53 species of medicinal plants (Apocynaceae). Some species have been used in Chinese folk medicine for the treatment of meningitis in children, rheumatic heart diseases, and diuresis, as well as a decongestive against migraine and sinusitis. This paper is a ...

  15. The genus Dacrydium in Malaya (Gymnospermae)

    NARCIS (Netherlands)

    Laubenfels, de David J.

    1976-01-01

    When Corner described the genus Dacrydium in Malaya in 1939 he recognized four kinds, three species and a marked variety, but he expressed considerable doubt about their distinctiveness because the available specimens showed all degrees of variation of leaves between one species and another. He

  16. Palynology of the Genus Stachytarpheta Vahl. (Verbenaceae

    Directory of Open Access Journals (Sweden)

    Olubukola ADEDEJI

    2010-12-01

    Full Text Available The exine morphology of pollen grains of Stachytarpheta indica (Linn. Vahl, Stachytarpheta cayennensis (Rich. Vahl and Stachytarpheta angustifolia (Mill. Vahl is reported. This study was carried out with a light microscope. Pollen grains from fresh anthers were collected and aceolysed. Statistical analysis used to analyse the data collected include cluster analysis, correlation analysis, similarity and distance indices. The pollen grains are spheroidal to oblate to sub-oblate in shape. They are aperturate, both colpate and porate. Tricolpate types occur most frequently, acolpate, monocolpate, bicolpate and tetracolpate types less frequently. The multicolpate and multiporate attributes in all the species indicate that the genus is not primitive in evolutionary history and this species probably, evolved around in the same time. According to the size, the pollen grains of the genus falls into groups permagna (pollen diameter 100-200 ?m and giganta (pollen diameter greater than 200 ?m. S. cayennensis and S. anguistifolia belong to group permagna and S. indica only in the group giganta. This separates S. indica from the other two species. The large pollen grain size in the genus clearly supports the fact that the flowers in the genus are more insect-and-bird pollinated than wind pollinated. The similarity and distance indices of the species showed that S. cayennensis and S. angustifolia are the closest. S. indica is closer to S. angustifolia but farther from S. cayennensis.

  17. On the genus Galidia and its species

    NARCIS (Netherlands)

    Jentink, F.A.

    1879-01-01

    In the year 1839 Is. Geoff. St. Hilaire ¹) described and figured three species of his new genus Galidia, viz: elegans, concolor and olivacea, all natives of Madagascar. It seems that Galidia olivacea has not been captured by the travellers who visited Madagascar after Bernier and Goudot: the only

  18. The genus Lolium : taxonomy and genetic resources

    NARCIS (Netherlands)

    Loos, B.P.

    1994-01-01

    Several aspects of variation within the genus Lolium, and more in detail within Lolium perenne (perennial ryegrass) have been highlighted. As the results are extensively discussed in each chapter, the general discussion is focused on two aspects of

  19. NSR superstring measures in genus 5

    NARCIS (Netherlands)

    Dunin-Barkovskiy, P.; Sleptsov, A.; Stern, A.

    2013-01-01

    Currently there are two proposed ansätze for NSR superstring measures: the Grushevsky ansatz and the OPSMY ansatz, which for genera g⩽4g⩽4 are known to coincide. However, neither the Grushevsky nor the OPSMY ansatz leads to a vanishing two-point function in genus four, which can be constructed from

  20. The Mesozoic megafossil genus Linguifolium Arber 1917

    Directory of Open Access Journals (Sweden)

    Pattemore Gary A.

    2015-12-01

    Full Text Available The plant megafossil genus Linguifolium Arber 1917 is chiefly known from the Middle and Upper Triassic of Gondwana. The range of Linguifolium extended beyond Gondwana by the Late Triassic, persisting there through the earliest Jurassic (Hettangian. The parent plants probably grew in a well-watered, canopied environment.

  1. Revision of the African genus Uvariastrum (Annonaceae

    Directory of Open Access Journals (Sweden)

    Thomas Couvreur

    2014-01-01

    Full Text Available The genus Uvariastrum (Annonaceae is restricted to continental Africa and is characterized by sepals with folded margins, few carpels and numerous stamens. The genus is mainly found in the tropical lowland rain forests of Africa, with one species growing in a drier woodland habitat. The species name U. pynaertii De Wild is reduced into synonymy with U. zenkeri Engl. & Diels. Uvaraistrum neglectum Paiva and U. modestum Diels are transferred to the genus Uvaria leading to two new combinations: Uvaria modesta (Diels Couvreur, comb. nov. and Uvaria paivana Couvreur, nom. nov.. Five species are currently recognized in Uvariastrum. The present revision, the first of the genus for over 100 years, provides an overview of previously published information and discussions on morphology, taxonomy and palynology. Preliminary conservation status assessments are provided for each species, as well as diagnostic keys for fruiting and flowering material as well as detailed species descriptions. Furthermore, all species are illustrated by line drawings and all species are mapped.

  2. Phylogenetic position of the spirochetal genus Cristispira

    DEFF Research Database (Denmark)

    Paster, B.J.; Pelletier, D.A.; Dewhirst, F.E.

    1996-01-01

    Comparative sequence analysis of 16S rRNA genes was used to determine the phylogenetic relationship of the genus Cristispira to other spirochetes. Since Cristispira organisms cannot presently be grown in vitro, 16S rRNA genes were amplified directly from bacterial DNA isolated from Cristispira a ...

  3. Thermoregulation of the subterranean rodent genus Bathyergus ...

    African Journals Online (AJOL)

    genus Bathyergus, comprising two species, B. suillus and. B. janetta, occurring in mesic and semi·arid habitats ... dunes along the north-western Cape coast, from Port Nolloth to the Orange River (De Graaff 1981). ... from a parallel circuit consisting of a replicate respirometer and gas scrubbers. Animals were deprived of ...

  4. Sarawakodendron, a new genus of Celastraceae

    NARCIS (Netherlands)

    Hou, Ding

    1967-01-01

    During my trip to Malaysia in 1966, sponsored by the Netherlands Foundation for the Advancement of Tropical Research (WOTRO), for doing field work on Anacardiaceae, a new tree genus was found in Sarawak belonging to the family Celastraceae which I have revised for the Flora Malesiana series I,

  5. Chemotaxonomy of the genus Nuxia (Buddlejaceae)

    DEFF Research Database (Denmark)

    Jensen, Søren Rosendal

    1999-01-01

    An investigation of two species of Nuxia (Buddlejaceae) showed that this genus is characterised by the presence of the eight-carbon iridoid glucoside unedoside and/or its derivatives. From N. floribunda was isolated unedoside, nuxioside (6-O-a-L-rhamnopyranosyl-unedoside) and 2''-acetyl-3...

  6. Chloothamnus, a neglected genus of Bambusaceae

    NARCIS (Netherlands)

    Henrard, J.Th.

    1936-01-01

    Chloothamnus BUSE ap. MIQUEL, Pl. Jungh. 1854, 386 — Oreiostachys GAMBLE ap. KOORDERS, Verh. Kon. Ak. Wet. 16, 1908, 657.. Hab.: Malay Archipelago. 1. C. chilianthus BUSE, l.c., type species of the genus — Schizostachyum chilianthum (BUSE) KURZ, Journ. As. Soc. Beng. 39, ii, 1870, 88 — non Melocanna

  7. A new genus of Blacinae (Hymenoptera: Braconidae)

    Science.gov (United States)

    Lester P. Gibson

    1977-01-01

    A new genus, Canalicephalus, of the subfamily Blacinae is described along with 4 new species, C. orientalis from Borneo, C. novus from New Guinea, and C. bakeri and C. mindanao, both from the Philippines. Keys are included to separate these 2 genera and the 4...

  8. The genus Kochia (Chenopodiaceae) in North America

    Science.gov (United States)

    Ge-Lin Chu; Stewart Sanderson

    2008-01-01

    The genus Kochia and Bassia with which it has been combined, of Chenopodiaceae tribe Camphorosmeae, were at one time considered to include plants native to Eurasia, Australia, and North America, and included species of both C3 and C4 photosynthetic types. This aggregate has been reduced in size by removal of a large group of C3 Australian genera and species. Because of...

  9. Records of the genus Coccygidium Saussure (Hymenoptera ...

    African Journals Online (AJOL)

    Coccygidium arabica sp. nov., (Hym., Braconidae, Agathidinae) is described from Saudi Arabia. Morphological diagnostic characters of the new species were figured and compared with those of the related species Coccygidium angostura. The genus Coccygidium Saussure is recorded for the first time from Saudi Arabia.

  10. The ITS2 of the genus Bulinus

    DEFF Research Database (Denmark)

    Jørgensen, Aslak; Stothard, J. R.; Madsen, Henry

    2013-01-01

    The freshwater snail genus Bulinus has been intensively investigated due to its role as intermediate host for trematode blood flukes that cause the debilitating disease schistosomiasis in man and livestock. Owing to taxonomic ambiguities within Bulinus, attention has often focused upon species...

  11. Conspectus of the genus Amyema Tieghem (Loranthaceae)

    NARCIS (Netherlands)

    Barlow, Bryan A.

    1992-01-01

    The Australasian/Malesian genus Amyema is reviewed. Particular attention is given to the species of the Malesian region, as a precursor to a treatment of Loranthaceae for Flora Malesiana. Amyema comprises 92 species, and is distributed from the southeast Asian mainland (Malaya, Thailand) throughout

  12. Phylogeny and taxonomy of the genus Gliocladiopsis

    NARCIS (Netherlands)

    Lombard, L.; Crous, P.W.

    2012-01-01

    Using a global set of isolates and a phylogenetic approach employing DNA sequence data from five genes (β-tubulin, histone H3, internal transcribed spacer region, 28S large subunit region and translation elongation factor 1-α), the taxonomic status of the genus Gliocladiopsis (Glionectria)

  13. Phylogeny and taxonomy of the genus Gliocladiopsis

    NARCIS (Netherlands)

    Lombard, L.; Crous, P.W.

    2012-01-01

    Using a global set of isolates and a phylogenetic approach employing DNA sequence data from five genes (ß-tubulin, histone H3, internal transcribed spacer region, 28S large subunit region and translation elongation factor 1-a), the taxonomic status of the genus Gliocladiopsis (Glionectria)

  14. Phylogenetic relationships in genus Gloriosa L.

    African Journals Online (AJOL)

    In an attempt to test the monophyly of the genus Gloriosa L., the chloroplast region trnL-trnF sequences were employed using Baeometra uniflora, Hexacyrtis dickiana, Neodregea glassii, Onixotis punctata, Onixotis stricta, Ornithoglossum parviflorum, Ornithoglossum undulatum, Ornithoglossum viride, Ornithoglossum ...

  15. The palm genus Acrocomia: Neotropical green gold

    Science.gov (United States)

    The genus Acrocomia, popularly known as macaw palm or macaúba, occurs in savanna areas and open forests of tropical America, with distribution from Central to southern South America. They are important oleaginous palm trees, due to their role in ecosystems, local economies, and their potential for b...

  16. The genus Mustelus (Family Triakidae, Order Carcharhiniformes ...

    African Journals Online (AJOL)

    spamer

    The genus Mustelus (Family Triakidae, Order. Carcharhiniformes), commonly called .... suitable for sharks with a well-defined length-at-birth. (L0). This eliminates the .... Table I: Parameter estimates using Fabens' method and standard errors (SE) and 95% confidence intervals (CI) for the Von. Bertalanffy growth model fitted ...

  17. Phylogeny of the plant genus Pachypodium (Apocynaceae

    Directory of Open Access Journals (Sweden)

    Dylan O. Burge

    2013-04-01

    Full Text Available Background. The genus Pachypodium contains 21 species of succulent, generally spinescent shrubs and trees found in southern Africa and Madagascar. Pachypodium has diversified mostly into arid and semi-arid habitats of Madagascar, and has been cited as an example of a plant group that links the highly diverse arid-adapted floras of Africa and Madagascar. However, a lack of knowledge about phylogenetic relationships within the genus has prevented testing of this and other hypotheses about the group.Methodology/Principal Findings. We use DNA sequence data from the nuclear ribosomal ITS and chloroplast trnL-F region for all 21 Pachypodium species to reconstruct evolutionary relationships within the genus. We compare phylogenetic results to previous taxonomic classifications and geography. Results support three infrageneric taxa from the most recent classification of Pachypodium, and suggest that a group of African species (P. namaquanum, P. succulentum and P. bispinosum may deserve taxonomic recognition as an infrageneric taxon. However, our results do not resolve relationships among major African and Malagasy lineages of the genus.Conclusions/Significance. We present the first molecular phylogenetic analysis of Pachypodium. Our work has revealed five distinct lineages, most of which correspond to groups recognized in past taxonomic classifications. Our work also suggests that there is a complex biogeographic relationship between Pachypodium of Africa and Madagascar.

  18. Interspecific hybridization in the genus Tulipa L.

    NARCIS (Netherlands)

    Creij, van M.G.M.

    1997-01-01

    The genus Tulipa L. comprises about 55 species. The tulip species are classified in two subgenera, Tulipa and Eriostemones, which are subdivided into five and three sections respectively. Commercial tulips are mainly cultivars

  19. The genus Alocasia (Araceae) in Australasia

    NARCIS (Netherlands)

    Hay, A.; Wise, Rosemary

    1991-01-01

    The genus Alocasia (Araceae) is revised for Australasia. Thirteen species are recognised and keyed; eleven are endemic to and one is thought to be introduced to and escaped in Papuasia; A. brisbanensis (F.M. Bailey) Domin is endemic to Australia, and is redescribed; five are new to science. The

  20. A conspectus of the genus Bhesa (Celastraceae)

    NARCIS (Netherlands)

    Hou, Ding

    1958-01-01

    In his Numerical List Wallich inserted four specific epithets in the genus Kurrimia, viz 4334 K. pulcherrima Wall., 4335 K. calophylla Wall., 4336 K. paniculata Wall., and later 7200 K.? macrophylla Wall. The latter one was provided with a question mark; it was a new combination for Itea macrophylla

  1. The genus Lophopyxis Hook. f. (Lophopyxidaceae)

    NARCIS (Netherlands)

    Sleumer, H.

    1968-01-01

    When revising the Icacinaceae from SE. Asia and Malesia recently, my interest was drawn again to the genus Lophopyxis Hook. f. Designated by its author (1887) tentatively as a member of the Euphorbiaceae, it was rejected from this family by Pax as early as 1890. Engler (1893) transferred Lophopyxis

  2. Genus Pygostolus Haliday (Hymenoptera: Braconidae: Euphorinae) new to Korea

    OpenAIRE

    Hye-Rin Lee; Tae-Ho An; Bong-Kyu Byun; Deok-Seo Ku

    2016-01-01

    The genus Pygostolus Haliday of the subfamily Euphorinae (Hymenoptera: Braconidae) with a newly recorded species, Pygostolus falcatus (Ness), is reported for the first time from Korea. Diagnosis and a photograph of the genus and species are provided.

  3. A New Genus of Macropsinae (Hemiptera: Cicadellidae) From Madagascar

    OpenAIRE

    Yang, Liyuan; Dietrich, C.H.; Zhang, Yalin

    2016-01-01

    Paragalboa acuta gen. & sp. n. is described and illustrated from Madagascar. The new genus shows morphological affinities to the Macropsini genus Galboa Distant recorded from Seychelles. A checklist of all known genera of Macropsinae is provided.

  4. A preliminary survey of the genus Buchwaldoboletus (Boletales: Boletaceae)

    Science.gov (United States)

    Beatriz Ortiz-Santana; Ernst E. Both

    2011-01-01

    Buchwaldoboletus is a small genus of about a dozen species with a world-wide distribution. The boletes of this genus are non-mycorrhizal, saprophytic and lignicolous. A preliminary survey is provided and seven new combinations are proposed.

  5. Khmeriosicyos, a new monotypic genus of Cucurbitaceae from Cambodia

    NARCIS (Netherlands)

    Wilde, de W.J.J.O.; Duyfjes, B.E.E.; Ham, van der R.W.J.M.

    2004-01-01

    A new monotypic genus from Cambodia is described. The genus is defined by a unique combination of characters and has distinct pollen features. The only species is Khmeriosicyos harmandii W.J. de Wilde & Duyfjes.

  6. Genus Phyllanthus for chronic hepatitis B virus infection

    DEFF Research Database (Denmark)

    Liu, J; Lin, Haili; McIntosh, H

    2001-01-01

    To evaluate the efficacy and safety of genus Phyllanthus for chronic hepatitis B virus (HBV) infection we performed a systematic review of randomized clinical trials. Randomized trials comparing genus Phyllanthus vs. placebo, no intervention, general nonspecific treatment, other herbal medicine...

  7. The phyletic status of the genus Planaria (Platyhelminthes, Turbellaria, Tricladida)

    NARCIS (Netherlands)

    Ball, Ian R.; Gourbault, Nicole

    1978-01-01

    The amphiatlantic distribution of the genus Planaria is incompatible with our current hypothesis of the historical biogeography of freshwater planarians. New anatomical studies suggest the possibility that the genus is not strictly monophyletic; new karyological data are strongly corroborative of

  8. Calocybella, a new genus for Rugosomyces pudicus (Agaricales, Lyophyllaceae) and emendation of the genus Gerhardtia.

    Science.gov (United States)

    Vizzini, Alfredo; Consiglio, Giovanni; Setti, Ledo; Ercole, Enrico

    2015-06-01

    Calocybella is a new genus established to accommodate Rugosomyces pudicus. Phylogenetic analyses based on a LSU-ITS sequence dataset place Calocybella sister to Gerhardtia from which it differs morphologically in the presence of clamp-connections and reddening context. The genus Gerhardtia is emended to also include taxa with smooth spores. According to our morphological analysis of voucher material, Calocybe juncicola s. auct. is shown to be Calocybella pudica.

  9. Elliptic genus of phases of N=2 theories

    OpenAIRE

    Libgober, A.

    2014-01-01

    We discuss an algebro-geometric description of Witten's phases of N=2 theories and propose a definition of their elliptic genus provided some conditions on singularities of the phases are met. For Landau-Ginzburg phase one recovers elliptic genus of LG models proposed in physics literature in early 90s. For certain transitions between phases we derive invariance of elliptic genus from an equivariant form of McKay correspondence for elliptic genus. As special cases one obtains Landau-Giznburg/...

  10. Limit groups, positive-genus towers and measure equivalence

    OpenAIRE

    Bridson, Martin R; Tweedale, Michael; Wilton, Henry

    2005-01-01

    By definition, an $\\omega$-residually free tower is positive-genus if all surfaces used in its construction are of positive genus. We prove that every limit group is virtually a subgroup of a positive-genus $\\omega$-residually free tower. By combining this with results of Gaboriau, we prove that elementarily free groups are measure equivalent to free groups.

  11. A Comprehensive review on the genus Plumbago with focus on ...

    African Journals Online (AJOL)

    Background: The genus Plumbago distributed in warm tropical regions throughout the world is the largest genus in Plumbaginaceae. Medicinal plants are characteristic to the genus Plumbago and are cultivated and utilized worldwide. Plumbago auriculata Lam. is common in South Africa and is often cultivated for its ...

  12. Modular functors are determined by their genus zero data

    DEFF Research Database (Denmark)

    Andersen, Jørgen Ellegaard; Ueno, Kenji

    2012-01-01

    We prove in this paper that the genus zero data of a modular functor determines the modular functor. We do this by establishing that the S-matrix in genus one with one point labeled arbitrarily can be expressed in terms of the genus zero information and we give an explicit formula. We do not assume...

  13. Genus Tinospora: Ethnopharmacology, Phytochemistry, and Pharmacology.

    Science.gov (United States)

    Chi, Sensen; She, Gaimei; Han, Dan; Wang, Weihua; Liu, Zhao; Liu, Bin

    2016-01-01

    The genus Tinospora includes 34 species, in which several herbs were used as traditional medicines by indigenous groups throughout the tropical and subtropical parts of Asia, Africa, and Australia. The extensive literature survey revealed Tinospora species to be a group of important medicinal plants used for the ethnomedical treatment of colds, headaches, pharyngitis, fever, diarrhea, oral ulcer, diabetes, digestive disorder, and rheumatoid arthritis. Indian ethnopharmacological data points to the therapeutic potential of the T. cordifolia for the treatment of diabetic conditions. While Tinospora species are confusing in individual ingredients and their mechanisms of action, the ethnopharmacological history of those plants indicated that they exhibit antidiabetic, antioxidation, antitumor, anti-inflammation, antimicrobial, antiosteoporosis, and immunostimulation activities. While the clinical applications in modern medicine are lacking convincing evidence and support, this review is aimed at summarizing the current knowledge of the traditional uses, phytochemistry, biological activities, and toxicities of the genus Tinospora to reveal its therapeutic potentials and gaps, offering opportunities for future researches.

  14. A holomorphic anomaly in the elliptic genus

    International Nuclear Information System (INIS)

    Murthy, Sameer

    2014-01-01

    We consider a class of gauged linear sigma models (GLSMs) in two dimensions that flow to non-compact (2,2) superconformal field theories in the infra-red, a prototype of which is the SL(2,ℝ)/U(1) (cigar) coset. We compute the elliptic genus of the GLSMs as a path-integral on the torus using supersymmetric localization. We find that the result is a Jacobi-like form that is non-holomorphic in the modular parameter τ of the torus, with mock modular behavior. This agrees with a previously-computed expression in the cigar coset. We show that the lack of holomorphicity of the elliptic genus arises from the contributions of a compact boson carrying momentum and winding excitations. This boson has an axionic shift symmetry and plays the role of a compensator field that is needed to cancel the chiral anomaly in the rest of the theory.

  15. Phytochemistry of the genus Skimmia (Rutaceae).

    Science.gov (United States)

    Epifano, Francesco; Fiorito, Serena; Genovese, Salvatore; Granica, Sebastian; Vitalini, Sara; Zidorn, Christian

    2015-07-01

    The genus Skimmia is a rich source of interesting secondary metabolites, including 20 alkaloids derived from anthranilic acid, 45 coumarins, 21 limonoids, four cholestane derivatives, six pentacyclic triterpenes, six flavonoids, and two unusual fatty acid derivatives. Skimmia is employed in folk medicine e.g. against fever, inflammations, and rheumatism. Skimmia extracts, Skimmia essential oils and pure compounds isolated from Skimmia extracts have been experimentally shown to have various bioactivities such as antioxidant, anti-inflammatory, antimicrobial, and insecticidal. In this review we discuss the exact structures of compounds isolated from members of the genus Skimmia, bioactivities of Skimmia extracts and pure compounds derived from them, and systematic implications of the patterns of occurrence of these compounds. Moreover, research gaps and interesting avenues for future research are discussed briefly. Copyright © 2015 Elsevier Ltd. All rights reserved.

  16. Genomic Characterization of the Taylorella Genus

    OpenAIRE

    H?bert, Laurent; Moumen, Bouziane; Pons, Nicolas; Duquesne, Fabien; Breuil, Marie-France; Goux, Didier; Batto, Jean-Michel; Laugier, Claire; Renault, Pierre; Petry, Sandrine

    2012-01-01

    The Taylorella genus comprises two species: Taylorella equigenitalis, which causes contagious equine metritis, and Taylorella asinigenitalis, a closely-related species mainly found in donkeys. We herein report on the first genome sequence of T. asinigenitalis, analyzing and comparing it with the recently-sequenced T. equigenitalis genome. The T. asinigenitalis genome contains a single circular chromosome of 1,638,559 bp with a 38.3% GC content and 1,534 coding sequences (CDS). While 212 CDSs ...

  17. Terpenoids from Octocorals of the Genus Pachyclavularia

    OpenAIRE

    Chang, Yu-Chia; Sheu, Jyh-Horng; Wu, Yang-Chang; Sung, Ping-Jyun

    2017-01-01

    In this paper, we reviewed natural compounds isolated from octocorals belonging to the genus Pachyclavularia, including 20 cembrane-, 39 briarane-, and eight briarellin-related diterpenoids, and one secosterol. The chemical constituents of these 68 secondary metabolites, and their names, structures, and bioactivities, along with studies of their biological activities, are summarized in this review. Based on the literature, many of these compounds possess bioactivities, including anti-inflamma...

  18. Synopsis of the genus Anopteris (Pteridophyta, Pteridaceae

    Directory of Open Access Journals (Sweden)

    A. V. Vaganov

    2016-09-01

    Full Text Available In the article a synopsis of the genus Anopteris (Prantl Diels is given. The synopsis of Anopteris includes three species. For each species, the Latin name, basionym, nomenclatural citation, synonyms, information on locus classicus, type, habitat, and distribution are given. An original key for identification of the species of Anopteris is also prepared. The localities of occurrence of each species are precisely given.

  19. Topological classification and enumeration of RNA structures by genus

    DEFF Research Database (Denmark)

    Andersen, Joergen Ellegard; Penner, Robert C.; Reidys, Christian

    2013-01-01

    To an RNA pseudoknot structure is naturally associated a topological surface, which has its associated genus, and structures can thus be classified by the genus. Based on earlier work of Harer-Zagier, we compute the generating function for the number of those structures of fixed genus and minimum...... molecules implies the existence of neutral networks of distinct molecules with the same structure of any genus. Certain RNA structures called shapes are shown to be in natural one-to-one correspondence with the cells in the Penner-Strebel decomposition of Riemann's moduli space of a surface of genus...

  20. A review on pharmacological significance of genus Jatropha (Euphorbiaceae).

    Science.gov (United States)

    Sharma, Surendra Kr; Singh, Harneet

    2012-11-01

    A number of herbs belonging to the genus Jatropha of Euphorbiaceae family are noted for their medicinal benefits. The genus Jatropha is one of the prospective biodiesel yielding crops. The plants which have been so far explored include J. curcas, J. gossypifolia, J. glandulifera, J. multifida and J. podagrica. Although, the plants of this genus are widely distributed, there is an exiguity of scientific literature proclaiming the medicinal benefits of the plants belonging to genus Jatropha. The present paper is a pragmatic approach to accrue the findings on this very significant genus.

  1. Phytochemistry and pharmacognosy of the genus Acronychia.

    Science.gov (United States)

    Epifano, Francesco; Fiorito, Serena; Genovese, Salvatore

    2013-11-01

    The genus Acronychia (Rutaceae) comprise 44 species, most of which are represented by shrubs and small trees, distributed in a wide geographical area of South-Eastern Asia comprising China, India, Malaysia, Indonesia, Australia, and the islands of the western Pacific Ocean. Most of the species of the genus Acronychia have been used for centuries as natural remedies in the ethnomedical traditions of indigenous populations as anti-microbial, anti-fungal, anti-spasmodic, stomachic, anti-pyretic, and anti-haemorragic agent. Moreover fruits and aerial parts are used as food in salads and condiments, while the essential oil obtained from flowers and leaves has been employed in cosmetics production. Phytochemicals isolated from Acronychia spp. include acetophenones, quinoline and acridone alkaloids, flavonoids, cinnamic acids, lignans, coumarins, steroids, and triterpenes. The reported biological activities of the above mentioned natural compounds refer to anti-plasmodial, anti-cancer, anti-oxidant, anti-inflammatory, anti-fungal, and neuroprotective effects. The aim of this review is to examine in detail from a phytochemical and pharmacologically point of view what is reported in the current literature about the properties of phytopreparations or individual active principles obtained from plants belonging to the Acronychia genus. Copyright © 2013 Elsevier Ltd. All rights reserved.

  2. Biodegradation of chlorpyrifos by bacterial genus Pseudomonas.

    Science.gov (United States)

    Gilani, Razia Alam; Rafique, Mazhar; Rehman, Abdul; Munis, Muhammad Farooq Hussain; Rehman, Shafiq Ur; Chaudhary, Hassan Javed

    2016-02-01

    Chlorpyrifos is an organophosphorus pesticide commonly used in agriculture. It is noxious to a variety of organisms that include living soil biota along with beneficial arthropods, fish, birds, humans, animals, and plants. Exposure to chlorpyrifos may cause detrimental effects as delayed seedling emergence, fruit deformities, and abnormal cell division. Contamination of chlorpyrifos has been found about 24 km from the site of its application. There are many physico-chemical and biological approaches to remove organophosphorus pesticides from the ecosystem, among them most promising is biodegradation. The 3,5,6-trichloro-2-pyridinol (TCP) and diethylthiophosphate (DETP) as primary products are made when chlorpyrifos is degraded by soil microorganisms which further break into nontoxic metabolites as CO(2), H(2)O, and NH(3). Pseudomonas is a diversified genus possessing a series of catabolic pathways and enzymes involved in pesticide degradation. Pseudomonas putida MAS-1 is reported to be more efficient in chlorpyrifos degradation by a rate of 90% in 24 h among Pseudomonas genus. The current review analyzed the comparative potential of bacterial species in Pseudomonas genus for degradation of chlorpyrifos thus, expressing an ecofriendly approach for the treatment of environmental contaminants like pesticides. © 2015 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

  3. The genus Crataegus: chemical and pharmacological perspectives

    Directory of Open Access Journals (Sweden)

    Dinesh Kumar

    2012-10-01

    Full Text Available Traditional drugs have become a subject of world importance, with both medicinal and economical implications. A regular and widespread use of herbs throughout the world has increased serious concerns over their quality, safety and efficacy. Thus, a proper scientific evidence or assessment has become the criteria for acceptance of traditional health claims. Plants of the genus Crataegus, Rosaceae, are widely distributed and have long been used in folk medicine for the treatment of various ailments such as heart (cardiovascular disorders, central nervous system, immune system, eyes, reproductive system, liver, kidney etc. It also exhibits wide range of cytotoxic, gastroprotective, anti-inflammatory, anti-HIV and antimicrobial activities. Phytochemicals like oligomeric procyanidins, flavonoids, triterpenes, polysaccharides, catecholamines have been identified in the genus and many of these have been evaluated for biological activities. This review presents comprehensive information on the chemistry and pharmacology of the genus together with the traditional uses of many of its plants. In addition, this review discusses the clinical trials and regulatory status of various Crataegus plants along with the scope for future research in this aspect.

  4. Histología y morfometría del ojo del pez dulceacuícola Paracheirodon axelrodi (Characiformes: Characidae

    Directory of Open Access Journals (Sweden)

    Mario O Tovar

    2009-12-01

    Full Text Available El pez dulceacuícola P. axelrodi es de gran importancia comercial en la Orinoquía Colombiana y a nivel mundial, pero carece de estudios acerca de su visión. Se utilizaron diez individuos, con longitud total promedio de 2.7 cm (SD= 0.2, n= 20. Se realizaron cortes a 8 μm y se tiρeron con H-E. El tamaρo relativo del ojo es 9.8% (SD= 1.1, n= 20; el cristalino tiene un tamaρo relativo de 64.3% (SD= 4.9, n=20. Una esclerótica con tejido cartilaginoso. La retina está constituida por ocho capas y dos membranas, hay areae centrales en la zona posterior, por lo tanto tiene mayor espesor que la zona lateral. El espesor promedio de las estructuras es: retina lateral: 144.5 μm (SD= 5.4, n= 20, retina temporal: 210.4 μm (SD= 14.8, n= 20; cristalino (esfιrico: dorso-ventral 759.6 μm (SD= 31.7, n= 20 y antero- posterior 763.4 μm (SD= 30.7, n= 20 y cσrnea: 27.6 μm (SD= 4.3, n= 20. El tamaρo relativo del ojo, relacionado con la presencia de areae centrales y una córnea delgada, muestra las necesidades visuales del neón cardenal (cazador para adaptarse al hábitat, lo que hace necesario tener un sistema visual desarrollado que le permita tener mejor sensibilidad y resolución visual.Histology and morphometry of the eye in the freshwater Paracheirodon axelrodi (Characiformes: Characidae. The visual system of Teleost fishes has a wide range of adaptations. The eye has suffered modifications, mainly towards better sensitivity and visual resolution according to specific environmental conditions. In that way, this organ is so important for survival. In spite of being the most commercialized Orinoquía species, and one of the most important ornamental fish worldwide, there are almost no studies on the communication systems of P. axelrodi (including vision. We studied the eye in ten individuals of P. axelrodi, with a mean total length of 2.7 cm (SD= 0.2, n= 20. We measured eye relative size (TRO after sacrifice. Heads were processed for hematoxylin

  5. New species of miniature fish from Marajó Island, Pará, Brazil, with comments on its relationships (Characiformes: Characidae

    Directory of Open Access Journals (Sweden)

    Manoela M. F. Marinho

    Full Text Available A new miniature species of the family Characidae from Marajó Island, Pará State, Brazil is described and assigned to the genus Tyttobrycon. The new species can be distinguished from its congeners primarily by having multicuspid teeth on jaws, and additionally by having the combination of 5-7 premaxillary teeth, dorsal fin only with scattered melanophores and the presence of an adipose fin.

  6. Genus Ranges of 4-Regular Rigid Vertex Graphs.

    Science.gov (United States)

    Buck, Dorothy; Dolzhenko, Egor; Jonoska, Nataša; Saito, Masahico; Valencia, Karin

    2015-01-01

    A rigid vertex of a graph is one that has a prescribed cyclic order of its incident edges. We study orientable genus ranges of 4-regular rigid vertex graphs. The (orientable) genus range is a set of genera values over all orientable surfaces into which a graph is embedded cellularly, and the embeddings of rigid vertex graphs are required to preserve the prescribed cyclic order of incident edges at every vertex. The genus ranges of 4-regular rigid vertex graphs are sets of consecutive integers, and we address two questions: which intervals of integers appear as genus ranges of such graphs, and what types of graphs realize a given genus range. For graphs with 2 n vertices ( n > 1), we prove that all intervals [ a, b ] for all a genus ranges. For graphs with 2 n - 1 vertices ( n ≥ 1), we prove that all intervals [ a, b ] for all a genus ranges. We also provide constructions of graphs that realize these ranges.

  7. Genomic characterization of the Taylorella genus.

    Science.gov (United States)

    Hébert, Laurent; Moumen, Bouziane; Pons, Nicolas; Duquesne, Fabien; Breuil, Marie-France; Goux, Didier; Batto, Jean-Michel; Laugier, Claire; Renault, Pierre; Petry, Sandrine

    2012-01-01

    The Taylorella genus comprises two species: Taylorella equigenitalis, which causes contagious equine metritis, and Taylorella asinigenitalis, a closely-related species mainly found in donkeys. We herein report on the first genome sequence of T. asinigenitalis, analyzing and comparing it with the recently-sequenced T. equigenitalis genome. The T. asinigenitalis genome contains a single circular chromosome of 1,638,559 bp with a 38.3% GC content and 1,534 coding sequences (CDS). While 212 CDSs were T. asinigenitalis-specific, 1,322 had orthologs in T. equigenitalis. Two hundred and thirty-four T. equigenitalis CDSs had no orthologs in T. asinigenitalis. Analysis of the basic nutrition metabolism of both Taylorella species showed that malate, glutamate and alpha-ketoglutarate may be their main carbon and energy sources. For both species, we identified four different secretion systems and several proteins potentially involved in binding and colonization of host cells, suggesting a strong potential for interaction with their host. T. equigenitalis seems better-equipped than T. asinigenitalis in terms of virulence since we identified numerous proteins potentially involved in pathogenicity, including hemagluttinin-related proteins, a type IV secretion system, TonB-dependent lactoferrin and transferrin receptors, and YadA and Hep_Hag domains containing proteins. This is the first molecular characterization of Taylorella genus members, and the first molecular identification of factors potentially involved in T. asinigenitalis and T. equigenitalis pathogenicity and host colonization. This study facilitates a genetic understanding of growth phenotypes, animal host preference and pathogenic capacity, paving the way for future functional investigations into this largely unknown genus.

  8. Genomic characterization of the Taylorella genus.

    Directory of Open Access Journals (Sweden)

    Laurent Hébert

    Full Text Available The Taylorella genus comprises two species: Taylorella equigenitalis, which causes contagious equine metritis, and Taylorella asinigenitalis, a closely-related species mainly found in donkeys. We herein report on the first genome sequence of T. asinigenitalis, analyzing and comparing it with the recently-sequenced T. equigenitalis genome. The T. asinigenitalis genome contains a single circular chromosome of 1,638,559 bp with a 38.3% GC content and 1,534 coding sequences (CDS. While 212 CDSs were T. asinigenitalis-specific, 1,322 had orthologs in T. equigenitalis. Two hundred and thirty-four T. equigenitalis CDSs had no orthologs in T. asinigenitalis. Analysis of the basic nutrition metabolism of both Taylorella species showed that malate, glutamate and alpha-ketoglutarate may be their main carbon and energy sources. For both species, we identified four different secretion systems and several proteins potentially involved in binding and colonization of host cells, suggesting a strong potential for interaction with their host. T. equigenitalis seems better-equipped than T. asinigenitalis in terms of virulence since we identified numerous proteins potentially involved in pathogenicity, including hemagluttinin-related proteins, a type IV secretion system, TonB-dependent lactoferrin and transferrin receptors, and YadA and Hep_Hag domains containing proteins. This is the first molecular characterization of Taylorella genus members, and the first molecular identification of factors potentially involved in T. asinigenitalis and T. equigenitalis pathogenicity and host colonization. This study facilitates a genetic understanding of growth phenotypes, animal host preference and pathogenic capacity, paving the way for future functional investigations into this largely unknown genus.

  9. The new phylogenesis of the genus Mycobacterium

    Directory of Open Access Journals (Sweden)

    Enrico Tortoli

    2015-01-01

    Full Text Available Phylogenetic knowledge of the genus Mycobacterium is based on comparative analysis of their genetic sequences. The 16S rRNA has remained for many years the only target of such analyses, but in the last few years, other housekeeping genes have been investigated and the phylogeny based on their concatenated sequences become a standard. It is now clear that the robustness of the phylogenetic analysis is strictly related to the size of the genomic target used. Whole genome sequencing (WGS is nowadays becoming widely accessible and comparatively cheap. It was decided, therefore, to use this approach to reconstruct the ultimate phylogeny of the genus Mycobacterium. Over 50 types of strains of the same number of species of Mycobacterium were sequenced using the Illumina HiSeq platform. The majority of the strains of which the whole sequence was already available in GenBank were excluded from this panel with the aim of maximizing the number of the species with genome available. Following assembling and annotation with proper software, the phylogenetic analysis was conducted with PhyloPhlAn and the pan-genome analysis pipeline. The phylogenetic three which emerged was characterized by a clear-cut distinction of slowly and rapidly growing species with the latter being more ancestral. The species of the Mycobacterium terrae complex occupied an intermediate position between rapid and slow growers. Most of the species revealed clearly related and occupied specific phylogenetic branches. Thanks to the WGS technology, the genus Mycobacterium is finally approaching its definitive location.

  10. Molecular phylogenetic study in genus Hydra.

    Science.gov (United States)

    Kawaida, Hitomi; Shimizu, Hiroshi; Fujisawa, Toshitaka; Tachida, Hidenori; Kobayakawa, Yoshitaka

    2010-11-15

    Among 8000-9000 species of Cnidaria, only several dozens of species of Hydrozoa have been found in the fresh water. Hydra is such a fresh water polyp and has been used as a good material for research in developmental biology, regeneration and pattern formation. Although the genus Hydra has only a few ten species, its distribution is cosmopolitan. The phylogenetic relationship between hydra species is fascinating from the aspect of evolutionary biology and biogeography. However, only a few molecular phylogenetic studies have been reported on hydra. Therefore, we conducted a molecular phylogenetic study of the genus Hydra based on mitochondrial and nuclear nucleotide sequences using a hydra collection that has been kept in the National Institute of Genetics (NIG) of Japan. The results support the idea that four species groups comprise the genus Hydra. Within the viridissima group (green hydra) and braueri group, genetic distances between strains were relatively large. In contrast, genetic distances between strains among the vulgaris and oligactis groups were small irrespective of their geographic distribution. The vulgaris group strains were classified at least (as far as our investigated samples) into three sub-groups, vulgaris sub-group, carnea sub-group, and H. sp. (K5 and K6) sub-group. All of the vulgaris sub-group and H. sp. (K5 and K6) sub-group strains were collected in Eurasia. The carnea sub-group strains in NIG collection were all collected in North America. A few newly collected samples in Japan, however, suggested belonging to the carnea sub-group according to the molecular phylogenic analysis. This suggests a trans-Pacific distribution of the carnea sub-group hydra. Copyright © 2010 Elsevier B.V. All rights reserved.

  11. Terpenoids from Octocorals of the Genus Pachyclavularia

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    Yu-Chia Chang

    2017-12-01

    Full Text Available In this paper, we reviewed natural compounds isolated from octocorals belonging to the genus Pachyclavularia, including 20 cembrane-, 39 briarane-, and eight briarellin-related diterpenoids, and one secosterol. The chemical constituents of these 68 secondary metabolites, and their names, structures, and bioactivities, along with studies of their biological activities, are summarized in this review. Based on the literature, many of these compounds possess bioactivities, including anti-inflammation properties, cytotoxicity, and ichthyotoxicity, suggesting that they may have the potential to be developed into biomedical agents for treatment.

  12. Operators and higher genus mirror curves

    Energy Technology Data Exchange (ETDEWEB)

    Codesido, Santiago [Département de Physique Théorique et section de Mathématiques,Université de Genève,Genève, CH-1211 (Switzerland); Gu, Jie [Laboratoire de Physique Théorique de l’École Normale Supérieure,CNRS, PSL Research University,Sorbonne Universités, UPMC, 75005 Paris (France); Mariño, Marcos [Département de Physique Théorique et section de Mathématiques,Université de Genève,Genève, CH-1211 (Switzerland)

    2017-02-17

    We perform further tests of the correspondence between spectral theory and topological strings, focusing on mirror curves of genus greater than one with nontrivial mass parameters. In particular, we analyze the geometry relevant to the SU(3) relativistic Toda lattice, and the resolved ℂ{sup 3}/ℤ{sub 6} orbifold. Furthermore, we give evidence that the correspondence holds for arbitrary values of the mass parameters, where the quantization problem leads to resonant states. We also explore the relation between this correspondence and cluster integrable systems.

  13. The genus Platychara from the Western Hemisphere

    Science.gov (United States)

    Peck, R.E.; Forester, R.M.

    1979-01-01

    The systematics of four species belonging to the genus Platychara (Charophyta) from the Western Hemisphere is discussed. Three of the species, as defined herein, occur in Cretaceous and Paleocene rocks from Mexico through South America. The type species, P. compressa (Peck and Reker) Grambast, also of Cretaceous and Paleocene age, is herein restricted to deposits north of Mexico. These latter restrictions geographically separate P. compressa and P. perlata as presently defined but the relationship between these two species is still uncertain. A new species, P. grambastii, is proposed for specimens from Maestrichtian sediments in Jamaica. ?? 1979.

  14. A review of the genus Curtisia (Curtisiaceae

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    E. YU Yembaturova

    2009-08-01

    Full Text Available A review of the monotypic southern African endemic genus Curtisia Aiton is presented. Detailed studies of the fruit and seed structure provided new evidence in support of a close relationship between the family Curtisiaceae and Comaceae. Comparisons with several other members of the Comales revealed carpological similarities to certain species of Comus s.I., sometimes treated as segregate genera Dendrobenthamia Hutch, and Benthamidia Spach. We also provide information on the history of the assegai tree, Curtisia dentata (Burm.f. C.A.Sm. and its uses, as well as a formal taxonomic revision, including nomenclature, typification, detailed description and geographical distribution.

  15. The genus Bryoerythrophyllum (Musci, Pottiaceae in Antarctica

    Directory of Open Access Journals (Sweden)

    Sollman Philip

    2015-07-01

    Full Text Available Antarctic material of the genus Bryoerythrophyllum P. C. Chen was studied from all specimens present in KRAM. Bryoerythrophyllum recurvirostrum (Hedw. P. C. Chen var. antarcticum L. I. Savicz & Smirnova is treated as a distinct species: B. antarcticum (L. I. Savicz & Smirnova P. Sollman, stat. nov. Three species are now known in the Antarctic region: B. antarcticum, B. recurvirostrum and B. rubrum (Jur. ex Geh. P. C. Chen. Bryoerythrophyllum rubrum is reported for the first time from the Antarctic. It is a bipolar species. A key to the taxa is given. These species are described and briefly discussed, with notes on illustrations, reproduction, habitat, world range, distribution and elevation in Antarctica.

  16. Double genus expansion for general Ω background

    Science.gov (United States)

    Prudenziati, Andrea

    2016-07-01

    We will show how the refined holomorphic anomaly equation obeyed by the Nekrasov partition function at generic 𝜖1, 𝜖2 values becomes compatible, in a certain two-parameter expansion, with the assumption that both parameters are associated to genus counting. The underlying worldsheet theory will be analyzed and constrained in various ways, and we will provide both physical interpretation and some alternative evidence for this model. Finally, we will use the Gopakumar-Vafa formulation for the refined topological string in order to give a more quantitative description.

  17. A review of the Cis-Andean species of Hemibrycon Günther (Teleostei: Characiformes: Characidae: Stevardiinae, with description of two new species

    Directory of Open Access Journals (Sweden)

    Vinicius A. Bertaco

    Full Text Available The species of Hemibrycon occurring in the east of the Andean Cordilleras are reviewed based on their type series and additional specimens. Nine species are redescribed: H. beni from río Beni basin, Bolivia; H. helleri from the upper rio Ucayali, Peru; H. huambonicus from the ríos Huallaga and Marañon basins, Peru; H. jeslkii from the upper portions of ríos Marañon, Ucayali and Madeira basins, Bolivia, Brazil, and Peru; H. metae from río Orinoco basin, Colombia and Venezuela, and Caribbean coastal basins of Venezuela; H. polyodon (type species from río Pastaza basin, Ecuador; H. surinamensis from coastal basins of French Guiana and Suriname, and from lower rios Tapajós, Tocantins and Xingu basins, Brazil; H. taeniurus from river basins from Trinidad Island, Trinidad and Tobago, and H. tridens from upper río Ucayali basin, Peru. Two new species are described: H. inambari from the upper río Madre de Dios basin, Peru and H. mikrostiktos from río Ucayali basin, Peru. These species are distinguished among themselves mainly by the color pattern, and meristic characters. The distribution area of the genus is enlarged reaching the lower Tapajós, Tocantins and Xingu river basins, Brazil, with the first record of the occurrence of H. surinamensis in this country. A new description and diagnosis is provided for the type species of the genus, regardless its recent redescription. The type series of H. helleri that was previously considered dubious is found and described. Hemibrycon coxeyi and H. pautensis are considered junior synonyms of H. polyodon. Tetragonopterus (Hemibrycon trinitatis, previously considered species inquirenda in Characidae, and Hemibrycon guppyi are junior synonyms of H. taeniurus. Hemibrycon orcesi is transferred to Boehlkea. A taxonomic key for the species of the genus to the east of the Andean Cordilleras is presented.

  18. Heterogeneity in the genus Allovahlkampfia and the description of the new genus Parafumarolamoeba (Vahlkampfiidae; Heterolobosea).

    Science.gov (United States)

    Geisen, Stefan; Bonkowski, Michael; Zhang, Junling; De Jonckheere, Johan F

    2015-08-01

    Heterolobosean amoebae are common and diverse members of soil protist communities. In this study, we isolated seven strains of amoebae from soil samples taken in Tibet (at high altitude), Sardinia and the Netherlands, all resembling to belong to a similar heterolobosean morphospecies. However, sequences of the small subunit (SSU) rDNA and internal transcribed spacers, including the 5.8S rDNA, revealed a high heterogeneity in the genus Allovahlkampfia to which six of the isolates belong. Some unnamed strains, of which the sequences had been published before, are also included within the genus Allovahlkampfia. One Allovahlkampfia isolated in the Netherlands harbors a twin-ribozyme, containing a His-Cys box, similar to the one found in strain BA of Allovahlkampfia. The other SSU rDNA sequence grouped in phylogenetic analyses with sequences obtained in environmental sequencing studies as sister to the genus Fumarolamoeba. This phylogenetic placement was supported by analyses of the 5.8S rDNA leading us to describe it as a new genus Parafumarolamoeba. Copyright © 2015 Elsevier GmbH. All rights reserved.

  19. A Brief Chronicle of the Genus Cordyceps Fr., the Oldest Valid Genus in Cordycipitaceae (Hypocreales, Ascomycota)

    Science.gov (United States)

    Tanaka, Eiji; Han, Jae-Gu; Oh, Junsang; Han, Sang-Kuk; Lee, Kang-Hyo

    2014-01-01

    The earliest pre-Linnaean fungal genera are briefly discussed here with special emphasis on the nomenclatural connection with the genus Cordyceps Fr. Since its valid publication under the basidiomycetous genus Clavaria Vaill. ex L. (Clavaria militaris L. Sp. Pl. 2:1182, 1753), the genus Cordyceps has undergone nomenclatural changes in the post-Linnaean era, but has stood firmly for approximately 200 years. Synonyms of Cordyceps were collected from different literature sources and analyzed based on the species they represent. True synonyms of Cordyceps Fr. were defined as genera that represented species of Cordyceps Fr. emend. G. H. Sung, J. M. Sung, Hywel-Jones & Spatafora. The most common synonyms of Cordyceps observed were Clavaria and Sphaeria Hall, reported in the 18th and in the first half of the 19th century, respectively. Cordyceps, the oldest genus in the Cordyceps s. s. clade of Cordycipitaceae, is the most preferred name under the "One Fungus = One Name" principle on priority bases. PMID:25071376

  20. Yucca: A medicinally significant genus with manifold therapeutic attributes

    OpenAIRE

    Patel, Seema

    2012-01-01

    The genus Yucca comprising of several species is dominant across the chaparrals, canyons and deserts of American South West and Mexico. This genus has long been a source of sustenance and drugs for the Native Americans. In the wake of revived interest in drug discovery from plant sources, this genus has been investigated and startling nutritive and therapeutic capacities have come forth. Apart from the functional food potential, antioxidant, antiinflammation, antiarthritic, anticancer, antidi...

  1. Genus-two characters of the Ising model

    International Nuclear Information System (INIS)

    Choi, J.H.; Koh, I.G.

    1989-01-01

    As a first step in studying conformal theories on a higher-genus Riemann surface, we construct genus-two characters of the Ising model from their behavior in zero- and nonzero-homology pinching limits, the Goddard-Kent-Oliveco set-space construction, and the branching coefficients in the level-two A 1 /sup (1)/ Kac-Moody characters on the higher-genus Riemann surface

  2. A MONOGRAPH OF THE GENUS DIPLODISCUS* Turcz. (TILIACEAE

    Directory of Open Access Journals (Sweden)

    A. J. G. H. KOSTERMANS

    2014-01-01

    Full Text Available 1. Seven species of the genus Diplodiscus are described, of which three(D. microlepis, D. parviflorus and D. decumbens are new to science, and one (D. hookerianus was formerly described as Pentace (for the description of D. decumbens cf. p. 264.2. The area of distribution of the genus covers the Malay Peninsula,Borneo and the Philippines.3. The affinities of the genus are discussed.4. A key to the species is presented.

  3. Genus Tinospora: Ethnopharmacology, Phytochemistry, and Pharmacology

    Directory of Open Access Journals (Sweden)

    Sensen Chi

    2016-01-01

    Full Text Available The genus Tinospora includes 34 species, in which several herbs were used as traditional medicines by indigenous groups throughout the tropical and subtropical parts of Asia, Africa, and Australia. The extensive literature survey revealed Tinospora species to be a group of important medicinal plants used for the ethnomedical treatment of colds, headaches, pharyngitis, fever, diarrhea, oral ulcer, diabetes, digestive disorder, and rheumatoid arthritis. Indian ethnopharmacological data points to the therapeutic potential of the T. cordifolia for the treatment of diabetic conditions. While Tinospora species are confusing in individual ingredients and their mechanisms of action, the ethnopharmacological history of those plants indicated that they exhibit antidiabetic, antioxidation, antitumor, anti-inflammation, antimicrobial, antiosteoporosis, and immunostimulation activities. While the clinical applications in modern medicine are lacking convincing evidence and support, this review is aimed at summarizing the current knowledge of the traditional uses, phytochemistry, biological activities, and toxicities of the genus Tinospora to reveal its therapeutic potentials and gaps, offering opportunities for future researches.

  4. THE FERN-GENUS PLEOCNEMIA PRESL

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    R. E. HOLTTUM

    2015-11-01

    Full Text Available 1. The genus Pleocnemia Presl is redefined and differentiated from Tectaria- Cav. and Arcypteris Underw., the latter genus being very closely related to Pleocne- mia. 2. The configuration of the perispore proved to be of importance for the characterisation of the .species. In this regard three types are distinguished, perispore 1 forming crisped anastomosing wings, perispore consisting of many slender spines, and, an intermediate type, perispore forming many small separate wings. 3. Tentatively 15 species are recognized. Of these, Pleocnemia winitii Holttum, P. acuminata Holttum, P. pleiotricha Holttum, P. presliana Holttum, P. dimidiolobata Holttum, P. tripinnata Holttum, and P. seranensis Holttum are described as new, aa well as one variety, P. conjugata var. elatior Holttum. 4. The following new combinations are made: P. hemiteliiformis (Racib. Holt- tum (basinym: Pleocnemia leuzeana var. hemiteliaeformis Racib., P. olivacea (Copel. Holttum (basinym: Tectaria olivacea Copel., P. kingii (Copel. Holttum (basinym: Tectaria kingii Copel., and P. chrysotricha (Bak. Holttum (basinym: Nephrodium chrysotrichum Bak.. 5. Reductions to synonymy are: Pleocnemia javanica Presl to P. conjugata (Bl. Presl, and Dictyopteris compitalis v. A. v. R. to P. hemiteliiformis (Racib. Holtt.

  5. Aggressive behavior in the genus Gallus sp

    Directory of Open Access Journals (Sweden)

    SA Queiroz

    2006-03-01

    Full Text Available The intensification of the production system in the poultry industry and the vertical integration of the poultry agribusiness have brought profound changes in the physical and social environment of domestic fowls in comparison to their ancestors and have modified the expression of aggression and submission. The present review has covered the studies focusing on the different aspects linked to aggressiveness in the genus Gallus. The evaluated studies have shown that aggressiveness and subordination are complex behavioral expressions that involve genetic differences between breeds, strains and individuals, and differences in the cerebral development during growth, in the hormonal metabolism, in the rearing conditions of individuals, including feed restriction, density, housing type (litter or cage, influence of the opposite sex during the growth period, existence of hostile stimuli (pain and frustration, ability to recognize individuals and social learning. The utilization of fighting birds as experimental material in the study of mechanisms that have influence on the manifestation of aggressiveness in the genus Gallus might comparatively help to elucidate important biological aspects of such behavior.

  6. Elliptic genus of E-strings

    Science.gov (United States)

    Kim, Joonho; Kim, Seok; Lee, Kimyeong; Park, Jaemo; Vafa, Cumrun

    2017-09-01

    We study a family of 2d N=(0, 4) gauge theories which describes at low energy the dynamics of E-strings, the M2-branes suspended between a pair of M5 and M9 branes. The gauge theory is engineered using a duality with type IIA theory, leading to the D2-branes suspended between an NS5-brane and 8 D8-branes on an O8-plane. We compute the elliptic genus of this family of theories, and find agreement with the known results for single and two E-strings. The partition function can in principle be computed for arbitrary number of E-strings, and we compute them explicitly for low numbers. We test our predictions against the partially known results from topological strings, as well as from the instanton calculus of 5d Sp(1) gauge theory. Given the relation to topological strings, our computation provides the all genus partition function of the refined topological strings on the canonical bundle over 1/2K3.

  7. The arithmetic of Prym varieties in genus 3

    OpenAIRE

    Bruin, Nils

    2004-01-01

    Given a curve of genus 3 with an unramified double cover, we give an explicit description of the associated Prym-variety. We also describe how an unramified double cover of a non-hyperelliptic genus 3 curve can be mapped into the Jacobian of a curve of genus 2 over its field of definition and how this can be used to do Chabauty- and Brauer-Manin type calculations for curves of genus 5 with an unramified involution. As an application, we determine the rational points on a smooth plane quartic ...

  8. Indicadores do desenvolvimento gonadal e nutricional de Prochilodus cearensis (Steindachner, 1911 (Characiformes, Prochilodontidae no açude Itans/Caicó, Rio Grande do Norte, Brasil - DOI: 10.4025/actascibiolsci.v25i2.2027 Gonadal and nutritional indexes influencing the reproductive behavior of Prochilodus cearensis (Steindachner, 1911 (Characiformes, Prochilodontidae in Itans water reservoir, Caicó, Rio Grande do N - DOI: 10.4025/actascibiolsci.v25i2.2027

    Directory of Open Access Journals (Sweden)

    Helio de Castro Bezerra Gurgel

    2003-04-01

    Full Text Available Analisaram-se alguns aspectos da reprodução e do estado nutricional de 213 exemplares (160 fêmeas e 53 machos de Prochilodus cearensis no açude Itans/ Caicó no Estado do Rio Grande do Norte, Brasil, no período de abril de 1996 a janeiro de 1997. As médias dos valores dos índices gônadossomático e gonadal apresentaram-se mais elevadas para fêmeas e machos no mês de janeiro. O índice de repleção foi semelhante entre os sexos. O fator de condição (ø mostrou-se mais elevado no período que antecede à reprodução. Não foi observada correlação significativa entre os fatores abióticos e o ciclo reprodutivo da espécie. No entanto, a presença de indivíduos com gônadas preparadas para a reprodução no trimestre que antecede ao das chuvas sugere que a desova possa estar condicionada a sua ocorrênciaThe aim of this study was to investigate the influence of gonadal and nutritional index on reproductive behavior of Prochilodus cearensis (Steindachner, 1911 (Characiformes, Prochilodontidae in Itans water reservoir, Caicó, Rio Grande do Norte. 213 animals were used (160 females and 53 males and collected from Itans water reservoir during the period from April 1996 to January 1997. The highest Gonadossomatic and Gonadal Index values were obtained for females and males from December to February. The repletion index was similar for males and females. The condition factor (ø showed the highest value just before reproduction. Data collected suggest that reproductive cycle in this species is not directly related to abiotic factors

  9. Transfer of Methanolobus siciliae to the genus Methanosarcina, naming it Methanosarcina siciliae, and emendation of the genus Methanosarcina

    Science.gov (United States)

    Ni, S.; Woese, C. R.; Aldrich, H. C.; Boone, D. R.

    1994-01-01

    A sequence analysis of the 16S rRNA of Methanolobus siciliae T4/M(T) (T = type strain) showed that this strain is closely related to members of the genus Methanosarcina, especially Methanosarcina acetivorans C2A(T). Methanolobus siciliae T4/M(T) and HI350 were morphologically more similar to members of the genus Methanosarcina than to members of the genus Methanolobus in that they both formed massive cell aggregates with pseudosarcinae. Thus, we propose that Methanolobus siciliae should be transferred to the genus Methanosarcina as Methanosarcina siciliae.

  10. The genus Schoenoxiphium (Cyperaceae. A preliminary account

    Directory of Open Access Journals (Sweden)

    I. Kukkonen

    1983-11-01

    Full Text Available The genus Schoenoxiphium of the tribe Cariceae of Cyperaceae is conservatively accepted as being restricted to the African continent and Madagascar. The special features of the inflorescence structure are described. The following species are provisionally recognized: S. basutorum Turrill, S. distinctum Kukkonen, S. ecklonii Nees, S.  filiforme Kükenthal, S. gracile Chermezon, S. lanceum (Thunberg Kukenthal, S. lehmannii (Nees Steudel, S.  madagascariense Chermezon, S. perdensum Kukkonen, S. rufum Nees, S. schweickerdtii Merxmiiller & Podlech, and  S. sparteum (Wahlenberg Kukenthal. A key to the species is provided and their distribution is roughly outlined. The morphological variation within the species suggests separation of taxa below specific level, or perhaps even at species level, but this will require more detailed information about the ecology, distribution and the cytology.

  11. Small RNAs in the genus Clostridium.

    Science.gov (United States)

    Chen, Yili; Indurthi, Dinesh C; Jones, Shawn W; Papoutsakis, Eleftherios T

    2011-01-25

    The genus Clostridium includes major human pathogens and species important to cellulose degradation, the carbon cycle, and biotechnology. Small RNAs (sRNAs) are emerging as crucial regulatory molecules in all organisms, but they have not been investigated in clostridia. Research on sRNAs in clostridia is hindered by the absence of a systematic method to identify sRNA candidates, thus delegating clostridial sRNA research to a hit-and-miss process. Thus, we wanted to develop a method to identify potential sRNAs in the Clostridium genus to open up the field of sRNA research in clostridia. Using comparative genomics analyses combined with predictions of rho-independent terminators and promoters, we predicted sRNAs in 21 clostridial genomes: Clostridium acetobutylicum, C. beijerinckii, C. botulinum (eight strains), C. cellulolyticum, C. difficile, C. kluyveri (two strains), C. novyi, C. perfringens (three strains), C. phytofermentans, C. tetani, and C. thermocellum. Although more than one-third of predicted sRNAs have Shine-Dalgarno (SD) sequences, only one-sixth have a start codon downstream of SD sequences; thus, most of the predicted sRNAs are noncoding RNAs. Quantitative reverse transcription-PCR (Q-RT-PCR) and Northern analysis were employed to test the presence of a randomly chosen set of sRNAs in C. acetobutylicum and several C. botulinum strains, leading to the confirmation of a large fraction of the tested sRNAs. We identified a conserved, novel sRNA which, together with the downstream gene coding for an ATP-binding cassette (ABC) transporter gene, responds to the antibiotic clindamycin. The number of predicted sRNAs correlated with the physiological function of the species (high for pathogens, low for cellulolytic, and intermediate for solventogenic), but not with 16S rRNA-based phylogeny. Copyright © 2011 Chen et al.

  12. Karyotype evolution and species differentiation in the genus Rattus ...

    African Journals Online (AJOL)

    Rattus is the most studied genus all over the world but species of the genus are not thoroughly reported from Manipur. The present paper deals with the morphometric, cytotaxonomic and phylogenetic studies of Manipur, India. The different species of Rattus namely Rattus rattus, Rattus brunneusculus, Rattus tanezumi and ...

  13. Revision of the genus Paratropus Gerstaecker (Coleoptera: Histeridae)

    NARCIS (Netherlands)

    Kanaar, P.

    1997-01-01

    The myrmecophilous and termitophilous genus Paratropus Gerstaecker is revised and figured. A key to the species is given. The number of species in this genus has been brought up to 80, of which 31 species are described as new: P. arriagadai (Tanzania), P. bakxi (Zaire), P. baloghi (Congo, Zaire,

  14. The neotropical genus Opeatocerata Melander (Díptera, Empididae

    Directory of Open Access Journals (Sweden)

    Kenneth G. V. Smith

    1989-01-01

    Full Text Available The Neotropical empidid genus Opeatocerata Melander, hitherto known from only a sigle female from Mexico, is redefined in the light of new material, including males. Three new species are described and illustrated, a key provided and the presence of the genus now additionally established in Costa Rica, Panama, Bolivia, Ecuador, Trinidad and Brazil.

  15. Torsionfree sheaves over a nodal curve of arithmetic genus one

    Indian Academy of Sciences (India)

    We classify all isomorphism classes of stable torsionfree sheaves on an irreducible nodal curve of arithmetic genus one defined over C C . Let be a nodal curve of arithmetic genus one defined over R R , with exactly one node, such that does not have any real points apart from the node. We classify all isomorphism ...

  16. A partial revision of the genus Metabelba grandjean (Oribatei, Acari)

    NARCIS (Netherlands)

    Hammen, van der L.

    1953-01-01

    INTRODUCTION The genus Metabelba was created by Grandjean in 1936 for Belbidae of which the solenidions of tibiae II and III are coupled with protective hairs, but of which the solenidion of tibia IV is free, long, and tactile. The genus belongs to the group of rather small species that are never

  17. Note on the genus Barteria Hook. f. (Flacourtiaceae or Passifloraceae)

    NARCIS (Netherlands)

    Sleumer, H.

    1974-01-01

    The discrimination of species in the genus Barteria has become more and more difficult with the increasing number of collections in recent years. To explain his treatment of the genus in the forthcoming 2nd part of the Flacourtiaceae in the ‘Flore d’Afrique Central (Zaire-Rwanda-Burundi)’, the

  18. Revision of the genus Xerula Maire (Basidiomycetes, Agaricales in Poland

    Directory of Open Access Journals (Sweden)

    Anna Ronikier

    2011-01-01

    Full Text Available Data concerning morphology, ecology and distribution of Polish representatives of the genus Xerula Maire are discussed in the paper. All available specimens of X. pudens and X. melanotricha from Polish herbaria were reexamined to verify their identity and geographical distribution. Several new localities of X. melanotricha in the country are provided. A key to European taxa of the genus is proposed.

  19. A path integral derivation of χy-genus

    International Nuclear Information System (INIS)

    Meng, Guowu

    2003-01-01

    The formula for the Hirzebruch χ y -genus of complex manifolds is a consequence of the Hirzebruch-Riemann-Roch formula. The classical index formulae for Todd genus, Euler number and signature correspond to the case when the complex variable y=0, -1 and 1 respectively. Here we give a direct derivation of this nice formula based on supersymmetric quantum mechanics

  20. Revision of the genus Microterys Thomson (Hymenoptera: Encyrtidae) of China

    NARCIS (Netherlands)

    Xu, Z.

    2002-01-01

    The species of Microterys Thomson from China are revised. Forty-three species are described and illustrated, of which 17 are new to science. Seventeen new species are described and illustrated, 26 species of the genus are revised and redescribed. The hosts of 33 species of the genus Microterys are

  1. Calongea, a new genus of truffles in the Pezizaceae (Pezizales)

    Science.gov (United States)

    Rosanne A. Healy; Gregory Bonito; James M. Trappe

    2009-01-01

    Phylogenetic analysis of the ITS and LSU rDNA of Pachyphloeus species from Europe and North America revealed a new truffle genus. These molecular analyses plus sequences downloaded from a BLAST search in GenBank indicated that Pachyphloeus prieguensis is within the Pezizaceae but well outside of the genus Pachyphloeus...

  2. The Polyakov relation for the sphere and higher genus surfaces

    International Nuclear Information System (INIS)

    Menotti, Pietro

    2016-01-01

    The Polyakov relation, which in the sphere topology gives the changes of the Liouville action under the variation of the position of the sources, is also related in the case of higher genus to the dependence of the action on the moduli of the surface. We write and prove such a relation for genus 1 and for all hyperelliptic surfaces. (paper)

  3. Genetic diversity within the genus Cynotilapia and its phylogenetic ...

    African Journals Online (AJOL)

    Cynotilapia's unicuspid teeth, a unique character used to delineate it from all other mbuna genera, leaves evolutionary biologists wondering which is the closest relative to this genus among mbuna cichlids. This genus has only two described species out of the 10-13 species/taxa, whereby the undescribed taxa are either ...

  4. Biological activities of species in the genus Tulbaghia : A review ...

    African Journals Online (AJOL)

    Species of the genus Tulbaghia has been widely used in traditional medicine to treat various ailments such rheumatism, fits, fever, earache, tuberculosis etc. It is believed that the species possess several therapeutic properties. This paper evaluates some of the biological activities of the genus Tulbaghia. It is evident from ...

  5. On the entropy of random surfaces with arbitrary genus

    International Nuclear Information System (INIS)

    Kostov, I.K.; Krzywicki, A.

    1987-01-01

    We calculate the susceptibility critical exponent γ for Polyakov random surfaces with arbitrary genus, using the Liouville theory to one-loop order. Some rigorous results obtained for special dimensionalities in a discrete version of the model are also noted. In all cases γ grows linearly with the genus of the surface. (orig.)

  6. Phylogeny of the genus Morus (Urticales: Moraceae) inferred from ...

    African Journals Online (AJOL)

    Both nuclear ribosomal ITS and chloroplast trnL-F sequences were acquired from 13 mulberry genotypes belonging to nine species and three varieties, and one paper mulberry. The later belongs to genus B. papyrifera, designed as outgroup, and were analyzed. Within the genus Morus, the sequence diversity of ITS was ...

  7. Molecular phylogeny and taxonomy of the genus Veloporphyrellus

    Science.gov (United States)

    Yan-Chun Li; Beatriz Ortiz-Santana; Nian-Kai Zeng; Bang Feng; Zhu L. Yang

    2014-01-01

    Veloporphyrellus is a genus known from North and Central America, southeastern Asia, and Africa. Because species of this genus are phenotypically similar to some taxa in several genera, such as Boletellus, Leccinum, Strobilomyces, Suillus and Tylopilus s.l. belonging to Boletales, its phylogenetic disposition has...

  8. Natural genetic variation in Calligonum Tunisian genus analyzed by ...

    African Journals Online (AJOL)

    The Calligonum genus is one of the most economically important resources of the Tunisian desert, playing an important role in the lives of desert local population. A great range of genetic diversity could be seen in diverse populations of this genus which are spread all over Tunisian areas. DNA-based molecular markers are ...

  9. Non-abelian bosonization in higher genus Riemann surfaces

    International Nuclear Information System (INIS)

    Koh, I.G.; Yu, M.

    1987-08-01

    We propose a generalization of the character formulas of the SU(2) Kac-Moody algebra to higher genus Riemann surfaces. With this construction, we show that the modular invariant partition function of the SO(4) κ = 1 Wess-Zumino model is equivalent, in arbitrary genus Riemann surfaces, to that of free fermion theory. (orig.)

  10. Australasian sequestrate fungi 17: The genus Hydnoplicata (Ascomycota, Pezizacae) resurrected

    Science.gov (United States)

    James M. Trappe; Andrew W. Claridge

    2006-01-01

    The genus Hydnoplicata and its type species, H. whitei, were described by Gilkey in 1954. Having discovered that it has amyloid asci and other characters that relate it to the genus Peziza, Trappe later proposed the new combination, Peziza whiten, even though the species is consistently...

  11. Revision of the genus Trypeticus Marseul (Coleoptera: Histeridae)

    NARCIS (Netherlands)

    Kanaar, P.

    2003-01-01

    The genus Trypeticus Marseul, 1864 is revised and figured. A key to the species is given. Redescriptions of the hitherto described species are presented. The number of species in this genus has been brought up to 100, of which 72 species are described as new: T. adebratti (Sabah, Brunei), T.

  12. Non-abelian bosonization in higher genus Riemann surfaces

    International Nuclear Information System (INIS)

    Koh, I.G.; Yu, M.

    1988-01-01

    We propose a generalization of the character formulas of the SU(2) Kac-Moody algebra to higher genus Riemann surfaces. With this construction, we show that the modular invariant partition funciton of the SO(4) k = 1 Wess-Zumino model is equivalent, in arbitrary genus Riemann surfaces, to that of free fermion theory. (orig.)

  13. A taxonomic revision of the Genus Origanum (Labiatae)

    NARCIS (Netherlands)

    Ietswaart, J.H.

    1980-01-01

    The present study deals with the systematics and taxonomy of the genus Origanum (Labiatae, Saturejeae). As this difficult genus was never before monographed, a revisional study was much needed. The data presented are mainly based on the study of herbarium specimens and in some cases of living ones.

  14. Florae Malesianae Precursores XXVIII. The genus Vaccinium in Malaysia

    NARCIS (Netherlands)

    Sleumer, H.

    1961-01-01

    Within the genus Vaccinium L. this revision of its Malaysian species — which comprises more than half of the total number of species of the genus — is the last in a series of modern treatments made for North America by W. H. Camp, for the Pacific area by C. Skottsberg, and for tropical America and

  15. The genus Gloriosa (Colchicaceae) : ethnobotany, phylogeny and taxonomy

    NARCIS (Netherlands)

    Maroyi, A.

    2012-01-01

    This thesis focuses on the ethnobotany, phylogeny and taxonomy of the genus Gloriosa L. over its distributional range. Some Gloriosa species are known to have economic and commercial value, but the genus is also well known for its complex alpha taxonomy. An appropriate taxonomy for this group is of

  16. The differentiation within the genus Chamaeleo Laurenti, 1768

    NARCIS (Netherlands)

    Hillenius, D.

    1959-01-01

    The main purpose of this study is to search for an explanation of the curious differentiation within the genus Chamaeleo. Since the species of this genus are rather doubtful units, I have studied the geograpical distribution of characters, not of the species, a method first used in botany (BAUR,

  17. Notes on the genus Pirdana Distant, 1886 (Lepidoptera: Hesperiidae)

    NARCIS (Netherlands)

    Jong, de R.; Treadaway, C.G.

    1993-01-01

    In the Oriental genus Pirdana Distant, 1886, the new species P. fusca is described from Samar (E Philippines). The phylogeny of the genus is discussed and as a consequence the endemic Sulawesi taxon P. hyela ismene (Felder & Felder, [1867]) is given back its species rank, bringing the total number

  18. Australasian sequestrate fungi 17: the genus Hydnoplicata (Ascomycota, Pezizaceae) resurrected.

    Science.gov (United States)

    James M. Trappe; Andrew W. Claridge

    2006-01-01

    The genus Hydnoplicata and its type species, H. whitei, were described by Gilkey in 1954. Having discovered that it has amyloid asci and other characters that relate it to the genus Peziza, Trappe later proposed the new combination, Peziza whitei, even though the species is consistently...

  19. On RNA-RNA interaction structures of fixed topological genus.

    Science.gov (United States)

    Fu, Benjamin M M; Han, Hillary S W; Reidys, Christian M

    2015-04-01

    Interacting RNA complexes are studied via bicellular maps using a filtration via their topological genus. Our main result is a new bijection for RNA-RNA interaction structures and a linear time uniform sampling algorithm for RNA complexes of fixed topological genus. The bijection allows to either reduce the topological genus of a bicellular map directly, or to lose connectivity by decomposing the complex into a pair of single stranded RNA structures. Our main result is proved bijectively. It provides an explicit algorithm of how to rewire the corresponding complexes and an unambiguous decomposition grammar. Using the concept of genus induction, we construct bicellular maps of fixed topological genus g uniformly in linear time. We present various statistics on these topological RNA complexes and compare our findings with biological complexes. Furthermore we show how to construct loop-energy based complexes using our decomposition grammar. Copyright © 2015 Elsevier Inc. All rights reserved.

  20. Log-concavity of the genus polynomials of Ringel Ladders

    Directory of Open Access Journals (Sweden)

    Jonathan L Gross

    2015-10-01

    Full Text Available A Ringel ladder can be formed by a self-bar-amalgamation operation on a symmetric ladder, that is, by joining the root vertices on its end-rungs. The present authors have previously derived criteria under which linear chains of copies of one or more graphs have log-concave genus polyno- mials. Herein we establish Ringel ladders as the first significant non-linear infinite family of graphs known to have log-concave genus polynomials. We construct an algebraic representation of self-bar-amalgamation as a matrix operation, to be applied to a vector representation of the partitioned genus distribution of a symmetric ladder. Analysis of the resulting genus polynomial involves the use of Chebyshev polynomials. This paper continues our quest to affirm the quarter-century-old conjecture that all graphs have log-concave genus polynomials.

  1. Genomes-based phylogeny of the genus Xanthomonas

    Directory of Open Access Journals (Sweden)

    Rodriguez-R Luis M

    2012-03-01

    Full Text Available Abstract Background The genus Xanthomonas comprises several plant pathogenic bacteria affecting a wide range of hosts. Despite the economic, industrial and biological importance of Xanthomonas, the classification and phylogenetic relationships within the genus are still under active debate. Some of the relationships between pathovars and species have not been thoroughly clarified, with old pathovars becoming new species. A change in the genus name has been recently suggested for Xanthomonas albilineans, an early branching species currently located in this genus, but a thorough phylogenomic reconstruction would aid in solving these and other discrepancies in this genus. Results Here we report the results of the genome-wide analysis of DNA sequences from 989 orthologous groups from 17 Xanthomonas spp. genomes available to date, representing all major lineages within the genus. The phylogenetic and computational analyses used in this study have been automated in a Perl package designated Unus, which provides a framework for phylogenomic analyses which can be applied to other datasets at the genomic level. Unus can also be easily incorporated into other phylogenomic pipelines. Conclusions Our phylogeny agrees with previous phylogenetic topologies on the genus, but revealed that the genomes of Xanthomonas citri and Xanthomonas fuscans belong to the same species, and that of Xanthomonas albilineans is basal to the joint clade of Xanthomonas and Xylella fastidiosa. Genome reduction was identified in the species Xanthomonas vasicola in addition to the previously identified reduction in Xanthomonas albilineans. Lateral gene transfer was also observed in two gene clusters.

  2. Analysis of synonymous codon usage patterns in the genus Rhizobium.

    Science.gov (United States)

    Wang, Xinxin; Wu, Liang; Zhou, Ping; Zhu, Shengfeng; An, Wei; Chen, Yu; Zhao, Lin

    2013-11-01

    The codon usage patterns of rhizobia have received increasing attention. However, little information is available regarding the conserved features of the codon usage patterns in a typical rhizobial genus. The codon usage patterns of six completely sequenced strains belonging to the genus Rhizobium were analysed as model rhizobia in the present study. The relative neutrality plot showed that selection pressure played a role in codon usage in the genus Rhizobium. Spearman's rank correlation analysis combined with correspondence analysis (COA) showed that the codon adaptation index and the effective number of codons (ENC) had strong correlation with the first axis of the COA, which indicated the important role of gene expression level and the ENC in the codon usage patterns in this genus. The relative synonymous codon usage of Cys codons had the strongest correlation with the second axis of the COA. Accordingly, the usage of Cys codons was another important factor that shaped the codon usage patterns in Rhizobium genomes and was a conserved feature of the genus. Moreover, the comparison of codon usage between highly and lowly expressed genes showed that 20 unique preferred codons were shared among Rhizobium genomes, revealing another conserved feature of the genus. This is the first report of the codon usage patterns in the genus Rhizobium.

  3. Mitochondrial DNA evolution in the genus Equus.

    Science.gov (United States)

    George, M; Ryder, O A

    1986-11-01

    Employing mitochondrial DNA (mtDNA) restriction-endonuclease maps as the basis of comparison, we have investigated the evolutionary affinities of the seven species generally recognized as the genus Equus. Individual species' cleavage maps contained an average of 60 cleavage sites for 16 enzymes, of which 29 were invariant for all species. Based on an average divergence rate of 2%/Myr, the variation between species supports a divergence of extant lineages from a common ancestor approximately 3.9 Myr before the present. Comparisons of cleavage maps between Equus przewalskii (Mongolian wild horse) and E. caballus (domestic horse) yielded estimates of nucleotide sequence divergence ranging from 0.27% to 0.41%. This range was due to intraspecific variation, which was noted only for E. caballus. For pairwise comparisons within this family, estimates of sequence divergence ranged from 0% (E. hemionus onager vs. E. h. kulan) to 7.8% (E. przewalskii vs. E. h. onager). Trees constructed according to the parsimony principle, on the basis of 31 phylogenetically informative restriction sites, indicate that the three extant zebra species represent a monophyletic group with E. grevyi and E. burchelli antiquorum diverging most recently. The phylogenetic relationships of E. africanus and E. hemionus remain enigmatic on the basis of the mtDNA analysis, although a recent divergence is unsupported.

  4. THE GENUS VIBURNUM (CAPRIFOLIACEAE IN MALAYSIA

    Directory of Open Access Journals (Sweden)

    J. H. KERN

    2015-11-01

    Full Text Available 1. In the following pages an account of the genus Viburnum in Malaysia is presented. 2. The distribution of its species is briefly discussed and a map relating to it added. 3. The main part of the present paper consists of keys to the sections and species, followed by a systematic treatment of the 16 species admitted for the region. 4. Three new subsections are proposed, viz. Viburnum subsect. Punctata Kern, subsect. Sambucina Kern, and subsect. Lutescentia Kern. Viburnum subseries Coriacea Maxim, is reduced to the rank of a subsection. 5. Three species and two varieties are described as new, viz. Viburnum ampli- ficatum Kern, V. clemensae Kern, V. hispidulum Kern, V. coriaceum, var. longiflorutn Kern, and V. sambucinum var. subglabrum Kern. 6. The following species are reduced to the rank of varieties: Viburnum flori- bundum Merr. has become V. luzonicum var. floribundum (Merr. Kern, and V. sinu- atum Merr. has become V. luzonicum var. sinuatum (Merr. Kern. 7. The following reductions'to synonymy are made: Viburnum longistamineum Ridl. to V. sambucinum- var. subglabrum Kern; V. sumatranum Miq., V.villosum Ridl., and V. inopinatum Craib all to V. sambucinum var. tovientosum Hallier f.; V. forbesii Fawc. partly to V. sambucimim Bl., partly to V. coriaceum BL; and V. zippelii Miq. to V. japonicum (Thunb. Spr. 8. Emended descriptions of Viburnum beccarii Gamble and of V. junghuhnii Miq. are given.

  5. Genetics and Genomics of the Genus Amycolatopsis.

    Science.gov (United States)

    Kumari, Rashmi; Singh, Priya; Lal, Rup

    2016-09-01

    Actinobacteria are gram-positive filamentous bacteria which contains some of the most deadly human pathogens (Mycobacterium tuberculosis, M. leprae, Corynebacterium diphtheriae, Nocardia farcinica), plant pathogens (Streptomyces scabies, Leifsonia xyli) along with organisms that produces antibiotic (Streptomycetes, Amycolatopsis, Salinospora). Interestingly, these bacteria are equipped with an extraordinary capability of producing antibiotics and other metabolites which have medicinal properties. With the advent of inexpensive genome sequencing techniques and their clinical importance, many genomes of Actinobacteria have been successfully sequenced. These days, with the constant increasing number of drug-resistant bacteria, the urgent need for discovering new antibiotics has emerged as a major scientific challenge. And, unfortunately the traditional method of screening bacterial strains for the production of antibiotics has decreased leading to a paradigm shift in the planning and execution of discovery of novel biosynthetic gene clusters via genome mining process. The entire focus has shifted to the evaluation of genetic capacity of organisms for metabolite production and activation of cryptic gene clusters. This has been made possible only due to the availability of genome sequencing and has been augmented by genomic studies and new biotechnological approaches. Through this article, we present the analysis of the genomes of species belonging to the genus Amycolatopsis, sequenced till date with a focus on completely sequenced genomes and their application for further studies.

  6. American Tertiary mollusks of the genus Clementia

    Science.gov (United States)

    Woodring, W.P.

    1927-01-01

    Aside from its value as an aid in determining the age of Tertiary beds, the chief interest of the genus Clementia lies in the anomalous features of its present and former distribution. An attempt is made in this paper to trace its geologic history, to point out its paleobiologic significance, and to describe all the known American Tertiary species. The fossils from Colombia used in preparing this report were collected during explorations made under the direction of Dr. 0. B. Hopkins, chief geologist of the Imperial Oil Co. (Ltd.), who kindly donated them to the United States National Museum. Dr. T. Wayland Vaughan, of the Scripps Institution of Oceanography, furnished information relating to specimens collected by him in Mexico. Dr. Bruce L. Clark, of the University of California; Dr. G. Dallas Hanna, of the California Academy of Sciences; Dr. H. A. Pilsbry, of the Philadelphia Academy of Natural Sciences; and Dr. W. D. Matthew, of the American Museum of Natural History, generously loaned type specimens and other material. Doctor Clark and Doctor Hanna also gave information concerning the Tertiary species from California. Mr. Ralph B. Stewart, of the University of California, read the manuscript, and I have taken advantage of his suggestions. I am also indebted to Mr. L. R. Cox, of the British Museum, for information relating to the fossil species from Persia, Zanzibar, and Burma, and to Dr. Axel A. Olsson, of the International Petroleum Co., for data concerning undescribed Tertiary species from Peru.

  7. Sutorius: a new genus for Boletus eximius.

    Science.gov (United States)

    Halling, Roy E; Nuhn, Mitchell; Fechner, Nigel A; Osmundson, Todd W; Soytong, Kasem; Arora, David; Hibbett, David S; Binder, Manfred

    2012-01-01

    Sutorius is described as a new genus of Boletaceae to accommodate Boletus robustus originally named illegitimately by C.C. Frost from eastern North America. The legitimate name, Boletus eximius, provided by C.H. Peck, has been used since for a dark purple to chocolate brown bolete with finely scaly stipe and reddish brown spore deposit. This iconic taxon has been documented on five continents. Despite the straightforward species identification from morphology, the interpretation of stipe macro-morphology and spore color has led to equivocal generic placement. Phylogenetic analyses of genes encoding large subunit rRNA and translation elongation factor 1α confirm Sutorius as a unique generic lineage in the Boletaceae. Two species are recognized based on multiple accessions: S. eximius, represented by collections from North America, Costa Rica, Guyana, Indonesia and Japan (molecular data are lacking for only the Guyanan and Japanese material); and S. australiensis, represented by material from Queensland, Australia. Additional collections from Zambia and Thailand represent independent lineages, but sampling is insufficient to describe new species for these entities.

  8. Functional proteomics within the genus Lactobacillus.

    Science.gov (United States)

    De Angelis, Maria; Calasso, Maria; Cavallo, Noemi; Di Cagno, Raffaella; Gobbetti, Marco

    2016-03-01

    Lactobacillus are mainly used for the manufacture of fermented dairy, sourdough, meat, and vegetable foods or used as probiotics. Under optimal processing conditions, Lactobacillus strains contribute to food functionality through their enzyme portfolio and the release of metabolites. An extensive genomic diversity analysis was conducted to elucidate the core features of the genus Lactobacillus, and to provide a better comprehension of niche adaptation of the strains. However, proteomics is an indispensable "omics" science to elucidate the proteome diversity, and the mechanisms of regulation and adaptation of Lactobacillus strains. This review focuses on the novel and comprehensive knowledge of functional proteomics and metaproteomics of Lactobacillus species. A large list of proteomic case studies of different Lactobacillus species is provided to illustrate the adaptability of the main metabolic pathways (e.g., carbohydrate transport and metabolism, pyruvate metabolism, proteolytic system, amino acid metabolism, and protein synthesis) to various life conditions. These investigations have highlighted that lactobacilli modulate the level of a complex panel of proteins to growth/survive in different ecological niches. In addition to the general regulation and stress response, specific metabolic pathways can be switched on and off, modifying the behavior of the strains. © 2016 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

  9. Color evolution in the hummingbird genus coeligena.

    Science.gov (United States)

    Parra, Juan Luis

    2010-02-01

    The remarkable diversity of coloration and species present in hummingbirds has been considered the result of sexual selection. I evaluate if color differences among species in the genus Coeligena are consistent with expectations from sexual selection theory. If sexual selection on color is important for speciation, closely related species should be markedly different in the colors of feather patches associated with aggression and breeding. I evaluate this prediction through a statistical assessment of the phylogenetic signal of colors from five feather patches: crown, gorget, belly, upper back, and rump. The first two are associated with aggressive and courtship displays and are expected to be under sexual selection, whereas the others are not. Contrary to expectations, the crown and gorget were the only patches with significant phylogenetic signal. Furthermore, I assess if populations of dichromatic species are more divergent in coloration and therefore have reduced gene flow. Color distances among dichromatic subspecies were larger than among monochromatic subspecies, but the magnitude of phenotypic differentiation was not related to levels of gene flow. These results support a role for sexual selection in shaping color variation among populations, but these differences alone are not sufficient to explain speciation.

  10. The genus Plectranthus in India and its chemistry.

    Science.gov (United States)

    Waldia, Shobha; Joshi, Bipin C; Pathak, Uma; Joshi, Mukesh C

    2011-02-01

    Phytochemical constituents isolated from Indian species of the genus Plectranthus reported up to 2009 are compiled. In India, the genus Plectranthus is found in all the habitats and altitudes, particularly in the Himalaya, the Southern Ghats, and the Nilgiri region. P. amboinicus, P. barbatus, P. caninus, P. mollis, P. coetsa, and P. incanus are the most common species found in India. Phytochemical studies of the genus revealed that Indian Plectranthus species are rich in essential oil, and that the most abundant secondary metabolites are diterpenoids, i.e., labdanes, abietanes, and ent-kauranes, as well as triterpenoids. Copyright © 2011 Verlag Helvetica Chimica Acta AG, Zürich.

  11. Diversity of secondary metabolites from Genus Artocarpus (Moraceae

    Directory of Open Access Journals (Sweden)

    ALIEFMAN HAKIM

    2010-11-01

    Full Text Available Hakim A. 2010. The diversity of secondary metabolites from Genus Artocarpus (Moraceae. Nusantara Bioscience 2:146-156. Several species of the Artocarpus genus (Moraceae have been investigated their natural product. The secondary metabolites successfully being isolatad from Artocarpus genus consist of terpenoid, flavonoids, stilbenoid, arylbenzofuran, neolignan, and adduct Diels-Alder. Flavonoid group represent the compound which is the most found from Artocarpus plant. The flavonoids compound which are successfully isolated from Artocarpus plant consist of the varied frameworks like chalcone, flavanone, flavan-3-ol, simple flavone, prenylflavone, oxepinoflavone, pyranoflavone, dihydrobenzoxanthone, furanodihydrobenzoxanthone, pyranodihydrobenzoxanthone, quinonoxanthone, cyclopentenoxanthone, xanthonolide, dihydroxanthone.

  12. The genus Eustigmaeus Berlese (Acari: Stigmaeidae) from Greece.

    Science.gov (United States)

    Stathakis, Theodoros I; Kapaxidi, Eleftheria V; Papadoulis, Georgios Th

    2016-11-13

    The present study summarizes the previous limited knowledge on the genus Eustigmaeus from Greece. Based on material collected from many localities, nine species are recorded from Greece for the first time and four species, Eustigmaeus irregularis sp. nov., E. fantinoui sp. nov., E. microvacuolatus sp. nov., and E. capitatus sp. nov. are described as new to science. Additionally, males of five known species of Eustigmaeus are described for the first time. A list of the world species of the genus Eustigmaeus and a key to species of this genus recorded in Greece are provided.

  13. On the toroidal compactifications of bosonic strings in higher genus

    International Nuclear Information System (INIS)

    Semikhatov, A.M.

    1989-01-01

    For the bosonic string in a higher genus, compactified on the maximal torus of a simply laced Lie group, we discuss a possibility to construct an operator formalism involving only those operators that are well-defined globally over the whole Riemann surface. We find, in particular, higher genus extensions of (some combinations of) the vertex operators for the Kac-Moody algebra. This allows us to derive the relation between the Sugawara and Virasoro constructions of the energy-momentum tensor on Riemann surfaces, and to propose an operator mechanism underlying the construction of group current correlation functions in higher genus. (orig.)

  14. Coulomb-gas representation on higher-genus surfaces

    International Nuclear Information System (INIS)

    Bagger, J.; Goulian, M.

    1990-01-01

    In this paper we use the Coulomb-gas approach to construct the minimal-model conformal blocks on higher-genus Riemann surfaces. We define the higher-genus blocks by sewing, and write them in terms of the rational blocks of a compactified scalar field. We show that spurious states decouple, which implies that the blocks degenerate correctly. As an example, we compute the genus-two partition function, and verify modular invariance for the subset of minimal models which only require one type of screening charge. (orig.)

  15. Australian mycophagous species of the genus Deplorothrips (Thysanoptera, Phlaeothripinae).

    Science.gov (United States)

    Mound, Laurence A; Tree, Desley J

    2016-12-16

    The genus Deplorothrips Mound & Walker is recorded from Australia for the first time. The genus is found widely across the continent, and descriptions and an illustrated identification key are provided to 14 new species. These have been found living on dead twigs and branches, particularly of Eucalyptus trees. Typical members of this genus have short maxillary stylets that are scarcely retracted into the head capsule, but some of the species have more deeply retracted stylets. Structural polymorphism is recorded in several species, associated both with sex and with body size. Remarkable variation is recorded for some species in the number of sense cones on the antennal segments.

  16. Comparative Genomics Reveals High Genomic Diversity in the Genus Photobacterium

    DEFF Research Database (Denmark)

    Machado, Henrique; Gram, Lone

    2017-01-01

    Vibrionaceae is a large marine bacterial family, which can constitute up to 50% of the prokaryotic population in marine waters. Photobacterium is the second largest genus in the family and we used comparative genomics on 35 strains representing 16 of the 28 species described so far, to understand...... the genomic diversity present in the Photobacterium genus. Such understanding is important for ecophysiology studies of the genus. We used whole genome sequences to evaluate phylogenetic relationships using several analyses (16S rRNA, MLSA, fur, amino-acid usage, ANI), which allowed us to identify two...

  17. Two new Bryconamericus: B. cinarucoense n. sp. and B. singularis n. sp. (Characiformes, Characidae from the Cinaruco River, Orinoco Basin, with keys to all Venezuelan species

    Directory of Open Access Journals (Sweden)

    Román-Valencia, C.

    2008-06-01

    Full Text Available Here we describe for the first time Bryconamericus cinarucoense n. sp. and Bryconamericus singularis n. sp., two new species of Characiformesfrom the Cinaruco River, Orinoco Basin in Venezuela. B. cinarucoense n. sp. is distinguished from all other species of the genus in having: upper jaw extending beyond lower, maxilla short with only one or two teeth, cartilaginous rhinosphenoid extending to anterior part of prevomer, pelvic bone with cartilage along anterior edge, lateral line pores in straight line. B. singularis n. sp. is distinguished from congeners by having top of head flat, dentary with six or seven small unicuspid teeth, a dark lateral band extending from posterior edge of humeral spot to midbase of caudal fin which widens behind dorsal-fin origin, and in having five supraneurals which lack cartilage on the upper and lower extremities. Keys to aid identification of all known Venezuela species are included. Bryconamericus motatanensis is placed in the synonymy of B. alpha. Previous reports of B. breviceps and B. heteresthes from Venezuela are misidentifications, and are here considered as either B. cinarucoense n. sp., or another as yet undescribed species.

  18. Some adaptational peculiarities of introduced species of the genus Hydrangea

    Directory of Open Access Journals (Sweden)

    V. N. Kuchma

    2006-03-01

    Full Text Available Among studied the Hydrangea L. genus the species, which most adapted to the environment of steppe conditions, were developed. H. cinerea Stall. and H. bretschneider Dipp. are recommended for use in laying out of parks, etc.

  19. Occurrence of genus Monostroma (Ulvales, Chlorophyta) from Ratnagiri (Maharashtra)

    Digital Repository Service at National Institute of Oceanography (India)

    Untawale, A.G.; Agadi, V.V.; Dhargalkar, V.K.

    The occurrence of a genus Monostroma has been recorded from the Shirgaon creek at Ratnagiri along the central west coast of India. The Monostroma sp. was found in the brackish water environment with low salinity, high nutrients and thick mangrove...

  20. [Molecular identification in genus of Lilium based on DNA barcoding].

    Science.gov (United States)

    Zheng, Si-Hao; Li, Ya-Kang; Ren, Wei-Guang; Huang, Lin-Fang

    2014-12-01

    To establish a new method for identifying genus of Lilium by DNA barcoding technology, ITS, ITS2, psbA-trnH, matK and rbcL sequences were analyzed in term of variation of inter- and intra-species, barcoding gap, neighbor-joining tree to distinguish genus of Lilium based on 978 sequences from experimental and GenBank database, and identification efficiency was evaluated by Nearest distance and BLAST1 methods. The results showed that DNA barcoding could identify different species in genus of Lilium. ITS sequence performed higher identification efficiency, and had significant difference between intra- and inter-species. And NJ tree could also divide species into different clades. Results indicate that DNA barcoding can identify genus of Lilium accurately. ITS sequence can be the optimal barcode to identify species of Lilium.

  1. Contribution to the genus Xanthocorus Miyatake (Coleoptera, Coccinellidae, Chilocorini).

    Science.gov (United States)

    Li, Wenjing; Chen, Xiaosheng; Wang, Xingmin; Ren, Shunxiang

    2015-01-01

    The genus Xanthocorus Miyatake, 1970 consists of three species from China, including two new species described here: Xanthocorusnigrosuturalis sp. n. and Xanthocorusmucronatus sp. n. A key to identification of species is given. Diagnoses, detailed descriptions, illustrations, and distributions are provided.

  2. A new genus of Smiliini (Hemiptera: Membracidae) from Costa Rica

    Science.gov (United States)

    A new genus and species, Smilirhexia naranja, is described from Costa Rica, the southern limit of the tribe Smiliini, and represents a strong divergence from the morphology of the oak-feeding genera prevalent in North America....

  3. A review on phytochemistry and ethnopharmacological aspects of genus Calendula

    Science.gov (United States)

    Arora, Disha; Rani, Anita; Sharma, Anupam

    2013-01-01

    This review includes 84 references on the genus Calendula (Asteraceae) and comprises ethnopharmacology, morphology and microscopy, phytoconstituents, pharmacological reports, clinical studies and toxicology of the prominent species of Calendula. Triterpene alcohols, triterpene saponins, flavonoids, carotenoids and polysaccharides constitute major classes of phytoconstituents of the genus. A few species of this genus have medicinal value, among these Calendula officinalis Linn., has been traditionally used in the treatment of various skin tumors, dermatological lesions, ulcers, swellings and nervous disorders as well as almost 200 cosmetic formulations, i.e., creams, lotions, shampoos. Despite a long tradition of use of some species, the genus has not been explored properly. In the concluding part, the future scope of Calendula species has been emphasized with a view to establish their multifarious biological activities and mode of action. PMID:24347926

  4. A new genus and species of Ceratocanthidae from Tanzania ...

    African Journals Online (AJOL)

    Coleoptera: Scarabaeoidea) from the Usambara Mountains (Tanzania), is described. The morphology of the clypeus and mesoepisternum is discussed, also with reference to other Ceratocanthidae. The affinities of the genus are discussed, and ...

  5. BRST quantization of superconformal theories on higher genus Riemann surfaces

    International Nuclear Information System (INIS)

    Leman Kuang

    1992-01-01

    A complex contour integral method is constructed and applied to the Becchi-Rouet-Stora-Tyutin (BRST) quantization procedure of string theories on higher genus Riemann surfaces with N=0 and 1 Krichever-Novikov (KN) algebras. This method makes calculations very simple. It is shown that the critical spacetime dimension of the string theories on a genus-g Riemann surface equals that of the string theories on a genus-zero Riemann surface, and that the 'Regge intercepts' in the genus-g case are α(g)=1-3/4g-9/8g 2 and 1/2-3/4g-17/16g 2 for bosonic strings and superstrings, respectively. (orig.)

  6. New evidence of homoplasy within the African genus Varicorhinus ...

    African Journals Online (AJOL)

    New evidence of homoplasy within the African genus Varicorhinus (Cyprinidae): an independent origin of specialized scraping forms in the adjacent drainage systems of Ethiopia inferred from mtDNA analysis.

  7. Higher genus correlators from the hermitian one-matrix model

    International Nuclear Information System (INIS)

    Ambjoern, J.; Chekhov, L.; Makeenko, Yu.

    1992-01-01

    We develop an iterative algorithm for the genus expansion of the hermitian NxN one-matrix model (is the Penner model in an external field). By introducing moments of the external field, we prove that the genus g contribution to the m-loop correlator depends only on 3g-2+m lower moments (3g-2 for the partition function). We present the explicit results for the partition function and the one-loop correlator in genus one. We compare the correlators for the hermitian one-matrix model with those at zero momenta for c=1 CFT and show an agreement of the one-loop correlators for genus zero. (orig.)

  8. Evolution and host specificity in the ectomycorrhizal genus Leccinum

    NARCIS (Netherlands)

    Bakker, den H.C.; Zuccarello, G.C.; Kuyper, T.W.; Noordeloos, M.E.

    2004-01-01

    Species of the ectomycorrhizal genus Leccinum are generally considered to be host specialists. We determined the phylogenetic relationships between species of Leccinum from Europe and North America based on second internal transcribed spacer (ITS2) and glyceraldehyde 3-phosphate dehydrogenase

  9. Comparative Genomics of Bacteriophage of the Genus Seuratvirus

    DEFF Research Database (Denmark)

    Sazinas, Pavelas; Redgwell, Tamsin; Rihtman, Branko

    2017-01-01

    Despite being more abundant and having smaller genomes than their bacterial host, relatively few bacteriophages have had their genomes sequenced. Here, we isolated 14 bacteriophages from cattle slurry and performed de novo genome sequencing, assembly, and annotation. The commonly used marker genes...... polB and terL showed these bacteriophages to be closely related to members of the genus Seuratvirus. We performed a core-gene analysis using the 14 new and four closely related genomes. A total of 58 core genes were identified, the majority of which has no known function. These genes were used...... to construct a core-gene phylogeny, the results of which confirmed the new isolates to be part of the genus Seuratvirus and expanded the number of species within this genus to four. All bacteriophages within the genus contained the genes queCDE encoding enzymes involved in queuosine biosynthesis. We suggest...

  10. Copépodes parasitos de fossas nasais de cinco espécies de peixes (Characiformes da planície de inundação do alto rio Paraná, Paraná, Brasil - DOI: 10.4025/actascibiolsci.v29i4.887 Parasitic copepods in the nasal fossae of five fish species (Characiformes from the upper Paraná river floodplain, Paraná, Brazil - DOI: 10.4025/actascibiolsci.v29i4.887

    Directory of Open Access Journals (Sweden)

    Maria de los Angeles Perez Lizama

    2008-02-01

    Full Text Available O presente trabalho teve como objetivo o estudo de copépodes parasitos de fossas nasais de peixes da planície de inundação do alto Rio Paraná. As coletas foram realizadas em diversos pontos da planície nos meses de março, junho e setembro de 2004. Foram coletados 73 exemplares de peixes da ordem Characiformes, de quatro famílias distintas, pertencentes a cinco espécies: Acestrorhynchus lacustris, Prochilodus lineatus, Schizodon borellii, Serrasalmus maculatus e Serrasalmus marginatus. Dentre os 73 peixes examinados, 53 encontravam-se parasitados por copépodes de fossas nasais, variando de 1 a 146 parasitos por peixe. Os parasitos encontrados pertenciam a três espécies conhecidas: Gamidactylus jaraquensis Thatcher & Boeger, 1984; Gamispatulus schizodontis Thatcher & Boeger, 1984 e Rhinergasilus piranhus Boeger & Thatcher, 1988. Diferenças foram observadas nas medidas corporais dos parasitos e na quantidade de espécies de parasitos por espécie de peixe em relação aos copépodes encontrados em estudos anteriores na região amazônica. O presente estudo constitui um dos poucos trabalhos de identificação de copépodes parasitos de fossas nasais de peixes da região Sul do Brazil.The present work had the objective to study parasitic copepods in the nasal fossae of fish from the upper Paraná river floodplain. Fish were captured in different locations of the floodplain in March, June and September, 2004. A total of 73 specimens (Characiformes were collected, belonging to 4 distinct families and 5 species: Acestrorhynchus lacustris (Acestrorhynchidae, Schizodon borellii (Anostomidae, Prochilodus lineatus (Prochilodontidae, Serrasalmus marginatus and Serrasalmus maculatus (Serrasalmidae. Among 73 fishes examined, 53 were parasitized by nasal fossae copepods, varying from 1 to 146 parasites per host. Parasites found belonged to 3 known species: Gamidactylus jaraquensis Thatcher & Boeger, 1984; Gamispatulus schizodontis Thatcher & Boeger

  11. Warionia (Asteraceae: a relict genus of Cichorieae?

    Directory of Open Access Journals (Sweden)

    Katinas, Liliana

    2008-12-01

    Full Text Available The genus Warionia, with its only species W. saharae, is endemic to the northwestern edge of the African Sahara desert. This is a somewhat thistle-like aromatic plant, with white latex, and fleshy, pinnately- partite leaves. Warionia is in many respects so different from any other genus of Asteraceae, that it has been tentatively placed in the tribes Cardueae, Cichorieae, Gundelieae, and Mutisieae. Until now, a comprehensive study of Warionia to have a complete context for discussing its taxonomic position is lacking. The general morphology, anatomy, palynology and chromosome number of W. saharae are investigated here, and the species is described and illustrated. Laticifers in leaves and stems indicate a relationship with Cichorieae, and are associated with the phloem, in contact with it or with the surrounding sclerenchyma sheath. The pollen features indicate a strong relation with Cardueae, namely the structure with Anthemoid pattern where the columellae are joined to the foot layer, the ectosexine with thin columellae, the endosexine with stout and ramified columellae, the conspicuous spines with globose bases and conspicuous apical channels, and the tectum surface very perforate. Chromosomal counts resulted in 2n = 34. The morphological and palynological evidence positions Warionia between the tribes Cardueae and Cichorieae suggesting that it could be a remnant of the ancestral stock that gave rise to both tribes.El género Warionia, y su única especie, W. saharae, es endémico del noroeste del desierto africano del Sahara. Es una planta semejante a un cardo, aromática, con látex blanco y hojas carnosas, pinnatipartidas. Warionia es tan diferente de otros géneros de Asteraceae que fue ubicada en las tribus Cardueae, Cichorieae, Gundelieae y Mutisieae. Hasta ahora, no existía un estudio global de Warionia como contexto para discutir su posición taxonómica. Se ha investigado aquí su morfología, anatomía, palinología y n

  12. The Genus Asparagus in Southern Africa*

    Directory of Open Access Journals (Sweden)

    J. P. Jessop

    1966-11-01

    Full Text Available A revision of the genus Asparagus in South Africa, South West Africa, Bechuanaland, Basutoland, and Swaziland has been undertaken. Notes are given on the value of most o f the characters which have been used in the separation of species, recent literature on the nature of  Asparagus assimilatory organs, and a technique for the examination of chromosomes. Chromosome counts are listed for ten taxa. There is a key to the forty species and four varieties. In the main part of the work these taxa are described, and their synonymy, taxonomy, distribution and habitats dealt with. Six species and one variety are new. The following are the new species and combinations:  A. setaceus (Kunth (Asparagopsis setacea Kunth, A. mueronatus, A. macowanii Bak. var. zuluensis (N. E. Br.  (A. zuluensis N. E. Br., A. rigidus, A. densiflorus (Kunth  {Asparagopsis densiflora Kunth,  A. aethiopicus L. var. angusticladus, A. falcatus L. var. ternifolius (Bak.  (A. aethiopicus L. var.  ternifolius Bak.,  A. aspergillus,  A. obermeyerae,  A. krebsianus (Kunth (Asparagopsis krebsiana Kunth,  A. acocksii.  A. crassicladus. Several plants o f horticultural importance occur in South Africa. The three best known are A. plumosus, which is reduced here to synonymy under  A. setaceus (Kunth Jessop, and  A. sprengeri and  A. myersii. A. sprengeri is being reduced to synonymy under  A. densiflorus (Kunth Jessop,.  A. myersii, which is a  nomen nudum, is also regarded as belonging to  A. densiflorus.

  13. The Exiguobacterium genus: biodiversity and biogeography

    Energy Technology Data Exchange (ETDEWEB)

    Vishnivetskaya, Tatiana A [ORNL; Kathariou, Sophia [North Carolina State University; Tiedje, James M. [Michigan State University, East Lansing

    2009-01-01

    Abstract. Bacteria of the genus Exiguobacterium are low G + C, Gram-positive facultative anaerobes that have been repeatedly isolated from ancient Siberian permafrost. In addition, Exiguobacterium spp. have been isolated from markedly diverse sources, including Greenland Glacial ice, hot springs at Yellowstone National Park, the rhizosphere of plants, and the environment of food processing plants. Strains of this hereto little known bacterium that have been retrieved from such different (and often extreme) environments are worthy of attention as they are likely to be specifically adapted to such environments and to carry variations in the genome which may correspond to psychrophilic and thermophilic adaptations. However, comparative genomic investigations of Exiguobacterium spp. from different sources have been limited. In this study, we employed different molecular approaches for the comparative analysis of 24 isolates from markedly diverse environments including ancient Siberian permafrost and hot springs at Yellowstone National Park. Pulsed-field gel electrophoresis (PFGE) with I-CeuI (an intron-encoded endonuclease), AscI and NotI were optimized for the determination of genomic fingerprints of nuclease-producing isolates. The application of a DNA macroarray for 82 putative stress-response genes yielded strain-specific hybridization profiles. Cluster analyses of 16S rRNA gene sequence data, PFGE I-CeuI restriction patterns and hybridization profiles suggested that Exiguobacterium strains formed two distinct divisions that generally agreed with temperature ranges for growth. With few exceptions (e.g., Greenland ice isolate GIC31), psychrotrophic and thermophilic isolates belonged to different divisions.

  14. Revision of the Genus Piestoneus SHARP (Coleoptera : Staphylinidae) from Japan

    OpenAIRE

    ShunIchiro, NAOMI; Natural History Museum and Institute

    1995-01-01

    This is the fourth part on a series of the taxonomic studies of the subfamily Piestinae from Japan, and the genus Piestoneus SHARP is treated. Three new species, Piestoneus deboiseae, P. monticola and P. oharai are described. The lectotype is designated for P. lewisii SHARP. A key to the species is provided. The important characters for the definition of the genus and the aedeagi for identification are illustrated.

  15. Polypores and genus concepts in Phanerochaetaceae (Polyporales, Basidiomycota

    Directory of Open Access Journals (Sweden)

    Otto Miettinen

    2016-12-01

    Full Text Available We explored whether DNA-phylogeny-based and morphology-based genus concepts can be reconciled in the basidiomycete family Phanerochaetaceae. Our results show that macromorphology of fruiting bodies and hymenophore construction do not reflect monophyletic groups. However, by integrating micromorphology and re-defining genera, harmonization of DNA phylogeny and morphological genus concepts is possible in most cases. In the case of one genus (Phlebiopsis, our genetic markers could not resolve genus limits satisfactorily and a clear morphological definition could not be identified. We combine extended species sampling, microscopic studies of fruiting bodies and phylogenetic analyses of ITS, nLSU and rpb1 to revise genus concepts. Three new polypore genera are ascribed to the Phanerochaetaceae: Oxychaete gen. nov. (type Oxyporus cervinogilvus, Phanerina gen. nov. (type Ceriporia mellea, and Riopa (including Ceriporia metamorphosa and Riopa pudens sp. nov.. Phlebiopsis is extended to include Dentocorticium pilatii, further species of Hjortstamia and the monotypic polypore genus Castanoporus. The polypore Ceriporia inflata is combined into Phanerochaete. The identity of the type species of the genus Riopa, R. davidii, has been misinterpreted in the current literature. The species has been included in Ceriporia as a species of its own or placed in synonymy with Ceriporia camaresiana. The effort to properly define R. davidii forced us to study Ceriporia more widely. In the process we identified five closely related Ceriporia species that belong to the true Ceriporia clade (Irpicaceae. We describe those species here, and introduce the Ceriporia pierii group. We also select a lectotype and an epitype for Riopa metamorphosa and neotypes for Sporotrichum aurantiacum and S. aurantium, the type species of the anamorphic genus Sporotrichum, and recommend that teleomorphic Riopa is conserved against it.

  16. A new genus Mesophlaeoba (Orthoptera: Acrididae: Acridinae from India

    Directory of Open Access Journals (Sweden)

    H. Kumar

    2015-04-01

    Full Text Available A new genus of Acridinae, Mesophlaeoba Kumar and Usmani gen. n. based on type species Mesophlaeoba usmanii Kumar and Usmani sp. n., is described and illustrated from India. The description was based on both conventional morphological and genital characters. The new genus is closely related to Phlaeoba Stal, 1861 but differs from it in presence of filiform antennae, absence of median carinula of fastigium of vertex and rounded posterior margin of pronotum.

  17. Genus-two correlators for critical Ising model

    International Nuclear Information System (INIS)

    Behera, N.; Malik, R.P.; Kaul, R.K.

    1989-01-01

    The characters and one- and two-point correlators for the critical Ising model on a genus-two Riemann surface have been obtained using their modular transformation properties and the factorization properties in the pinching limit of the zero-homology cycle of the surface. The procedure can easily be generalized to higher-genus Riemann surfaces and also to other rational conformal field theories

  18. Elliptic genus of singular algebraic varieties and quotients

    Science.gov (United States)

    Libgober, Anatoly

    2018-02-01

    This paper discusses the basic properties of various versions of the two-variable elliptic genus with special attention to the equivariant elliptic genus. The main applications are to the elliptic genera attached to non-compact GITs, including the theories regarding the elliptic genera of phases on N  =  2 introduced in Witten (1993 Nucl. Phys. B 403 159-222).

  19. On genus-two solutions for the ILW equation

    Science.gov (United States)

    Tutiya, Y.

    2018-02-01

    The existence of theta function solutions of genus two for the intermediate long-wave equation is established. A numerical example is also presented. The method basically goes along with Krichever's construction of theta function solutions for soliton equations, such as the Kronecker product equation. This idea leads us to a question whether a Riemann surface exists which allows a peculiar abelian integral of the third kind. The answer is affirmative at least for genus-two curves.

  20. Revision of the genus Trypeticus Marseul (Coleoptera: Histeridae)

    OpenAIRE

    Kanaar, P.

    2003-01-01

    The genus Trypeticus Marseul, 1864 is revised and figured. A key to the species is given. Redescriptions of the hitherto described species are presented. The number of species in this genus has been brought up to 100, of which 72 species are described as new: T. adebratti (Sabah, Brunei), T. alticola (Indonesia: Irian Jaya), T. angustifrons (Indonesia: Irian Jaya?), T. arriagadai (Philippines), T. aukei (W. Malaysia, Sabah), T. bertiae (India), T. boukei (Sabah), T. brevis (Sabah), T. capilla...

  1. Higher Genus Abelian Functions Associated with Cyclic Trigonal Curves

    Directory of Open Access Journals (Sweden)

    Matthew England

    2010-03-01

    Full Text Available We develop the theory of Abelian functions associated with cyclic trigonal curves by considering two new cases. We investigate curves of genus six and seven and consider whether it is the trigonal nature or the genus which dictates certain areas of the theory. We present solutions to the Jacobi inversion problem, sets of relations between the Abelian function, links to the Boussinesq equation and a new addition formula.

  2. The genus Clematis (Ranunculaceae): chemical and pharmacological perspectives.

    Science.gov (United States)

    Chawla, Rakesh; Kumar, Suresh; Sharma, Anupam

    2012-08-30

    Twenty six species of the genus Clematis (Ranunculaceae) have been traditionally used in various systems of medicine for the treatment of ailments such as nervous disorders, syphilis, gout, malaria, dysentry, rheumatism, asthma, and as analgesic, anti-inflammatory, diuretic, antitumour, antibacterial and anticancer. To emphasize on ethnopharmacology, chemical constituents, pharmacology, toxicology and clinical studies of various species of the genus Clematis. The available information on Clematis species was collected through electronic search of major scientific databases. A survey of literature revealed that triterpene saponins, alkaloids, flavonoids, lignans, steroids, coumarins, macrocyclic compounds, phenolic glycosides, anemonin and volatile oils constitute major classes of chemical constituents in the genus Clematis. Preliminary analgesic, anticancer, anti-inflammatory, diuretic, antiarthritis, hepatoprotective, hypotensive and HIV-1 protease inhibitor activity studies have been carried out on crude extracts of 26 traditionally used and medicinally promising species of Clematis genus. The species of the genus Clematis emerged as good source of traditional medicine for the treatment of various ailments. Although few experimental studies validated their traditional claims, but employed uncharacterized crude extracts. Such Clematis species need to be explored properly following bioactivity-directed fractionation with a view to isolate bioactive constituents, and to evaluate their possible mode of actions. These species hold great potential for detailed clinical studies so that these could be exploited as potential drugs. The review will help researchers to select medicinally potential species of Clematis genus for future research. Copyright © 2012 Elsevier Ireland Ltd. All rights reserved.

  3. Hayata glandulifera (Orchidaceae, New Genus and Species From Northern Vietnam

    Directory of Open Access Journals (Sweden)

    Leonid V. Averyanov

    2009-11-01

    Full Text Available New orchid related to Cheirostylis, Goodyera, Rhomboda and Zeuxine discovered in lowland central part of northern Vietnam is described in rank of separate genus Hayata. Proposed genus differs from Goodyera in 2 separate lateral stigmas; in not hairy hypochile; in massive, knob-like mesochile and in large 2-lobed, dentate epichile. It differs from Cheirostylis in large flowers with completely free sepals (newer forming tube; in peculiar bunches of capitate glands on lateral walls of hypochile and in not swollen succulent rhizome forming normal adventitious roots, not modified into ridges or pillows covered by root hairs. From Rhomboda discovered genus differs in absence of any keels on the lip; in specific papillae bunches inside hypochile and in not winged column. New genus may be also close to Zeuxine, from which it differs in plant habit, large flowers, large dentate lobes of epichile and in specific shape of stelidia and rostellar arms. Described plant not fits well with any genera of subtribe Goodyerinae and certainly desires generic segregation. Besides Vietnamese plant, described genus includes H. tabiyahanensis from Taiwan and H. sherriffii from Bhutan. Standard taxonomical treatment of new genus and key for its species identification is presented in the paper.

  4. Phylogenomic re-assessment of the thermophilic genus Geobacillus.

    Science.gov (United States)

    Aliyu, Habibu; Lebre, Pedro; Blom, Jochen; Cowan, Don; De Maayer, Pieter

    2016-12-01

    Geobacillus is a genus of Gram-positive, aerobic, spore-forming obligate thermophiles. The descriptions and subsequent affiliations of the species in the genus have mostly been based on polyphasic taxonomy rules that include traditional sequence-based methods such as DNA-DNA hybridization and comparison of 16S rRNA gene sequences. Currently, there are fifteen validly described species within the genus. The availability of whole genome sequences has provided an opportunity to validate and/or re-assess these conventional estimates of genome relatedness. We have applied whole genome approaches to estimate the phylogenetic relatedness among the sixty-three Geobacillus strains for which genome sequences are currently publicly available, including the type strains of eleven validly described species. The phylogenomic metrics AAI (Average Amino acid Identity), ANI (Average Nucleotide Identity) and dDDH (digital DNA-DNA hybridization) indicated that the current genus Geobacillus is comprised of sixteen distinct genomospecies, including several potentially novel species. Furthermore, a phylogeny constructed on the basis of the core genes identified from the whole genome analyses indicated that the genus clusters into two monophyletic clades that clearly differ in terms of nucleotide base composition. The G+C content ranges for clade I and II were 48.8-53.1% and 42.1-44.4%, respectively. We therefore suggest that the Geobacillus species currently residing within clade II be considered as a new genus. Copyright © 2016 Elsevier GmbH. All rights reserved.

  5. Topological classification and enumeration of RNA structures by genus.

    Science.gov (United States)

    Andersen, J E; Penner, R C; Reidys, C M; Waterman, M S

    2013-11-01

    To an RNA pseudoknot structure is naturally associated a topological surface, which has its associated genus, and structures can thus be classified by the genus. Based on earlier work of Harer-Zagier, we compute the generating function Dg,σ (z) = ∑n dg,σ (n)zn for the number dg,σ (n) of those structures of fixed genus g and minimum stack size σ with n nucleotides so that no two consecutive nucleotides are basepaired and show that Dg,σ (z) is algebraic. In particular, we prove that dg,2(n) ∼ kg n3(g−1/2 )γ n2, where γ2 ≈ 1.9685. Thus, for stack size at least two, the genus only enters through the sub-exponential factor, and the slow growth rate compared to the number of RNA molecules implies the existence of neutral networks of distinct molecules with the same structure of any genus. Certain RNA structures called shapes are shown to be in natural one-to-one correspondence with the cells in the Penner-Strebel decomposition of Riemann's moduli space of a surface of genus g with one boundary component, thus providing a link between RNA enumerative problems and the geometry of Riemann's moduli space.

  6. The Representatives of Amelanchier Medik. Genus in Ukraine

    Directory of Open Access Journals (Sweden)

    Opalko Anatoliy Ivanovich

    2015-04-01

    Full Text Available The information on fruit and decorative value, honey and medicinal properties of the genus Amelanchier Medik. is generalized. Their biological characteristics, chemical composition and palatability traits of the fruit, the ways of consumption and processing, including drying, preparing juices, syrups, jams, candied fruit jellies, confiture, and fruit wine are specified. The environmental adaptability and effectiveness of using juneberry for phytomelioration are mentioned. Several versions of the origin of the genus Amelanchier name and interpretation of its specific epithets are described. The controversial issues of the genus Amelanchier system were discussed from the classical and molecular genetic approaches. The attention is focused on two main aspects of views on the place of the genus Amelanchier representatives of the family Rosaceae Juss. within the particular subfamily, namely the subfamily Pyroideae Burnett (Maloideae S. Weber or the subfamily Amygdaloideae Arn., which indicates the necessity for further comparative morphological and molecular genetic studies of the family Rosaceae. The directions of evolution, habitat and invasive ability of some species of the genus Amelanchier are characterised. The list of the genus Amelanchier representatives cultivated in Ukraine is given.

  7. The genus Rhaponticum in East Asia

    Directory of Open Access Journals (Sweden)

    Gorovoy, P.

    2010-12-01

    Full Text Available The genus Rhaponticum in East Asia has always been a taxon for discussion. Rhaponticum carthamoides from East Siberia comprises three subspecies: carthamoides, chamarensis and orientale. Even though they differ in morphology, they do not have isolated areas. Rhaponticum satzyperovii was recently described and its author pointed out its affinity with Rh. uniflorum. Plant height, stem indumentum, and radical and stem leaf dissection were signaled as the diagnostic characters. Our present study on living and herbarium specimens of Rh. satzyperovii shows that the diagnostic characters are not consistent. The species area was also claimed to be an argument for considering Rh. satzyperovii a distinct species. This area covers the south of the Primorye Province in the Far East of Russia with some locations in the adjacent Jewish Autonomous Region and in China. In our study, the area of Rh. satzyperovii is found to be within the area of Rh. uniflorum and thereafter they turned out to have no disjunction. In East Asia, Rh. uniflorum is characterized by a wide range of morphological variability. We suggest that Rh. satzyperovii should be included within Rh. uniflorum without any taxonomic rank.El género Rhaponticum en el Este de Asia ha sido siempre un taxón discutido. Rhaponticum carthamoides del Este de Siberia incluye tres subespecies: carthamoides, chamarensis y orientale. Aunque difieren en su morfología, sus áreas no están aisladas. Rhaponticum satzyperovii fue descrito recientemente y su autor señaló su afinidad con Rh. uniflorum. Los caracteres diagnósticos fueron la altura de la planta, el indumento del tallo y las divisiones de las hojas basales y caulinares. Nuestro estudio de plantas vivas y muestras de herbario de Rh. satzyperovii muestra que los caracteres diagnósticos no son consistentes. El área de distribución también se argumentó para considerar Rh. satzyperovii una especie diferente. El área cubre el sur de la provincia de

  8. Proposal of nine novel species of the genus Lysinimicrobium and emended description of the genus Lysinimicrobium.

    Science.gov (United States)

    Hamada, Moriyuki; Shibata, Chiyo; Saitou, Satomi; Tamura, Tomohiko; Komaki, Hisayuki; Ichikawa, Natsuko; Oguchi, Akio; Hosoyama, Akira; Fujita, Nobuyuki; Yamamura, Hideki; Hayakawa, Masayuki; Suzuki, Ken-Ichiro

    2015-12-01

    Thirteen novel Gram-stain-positive bacteria were isolated from various samples collected from mangrove forests in Japan, and their taxonomic positions were investigated by a polyphasic approach. Phylogenetic analyses based on 16S rRNA gene sequence comparisons showed that the 13 isolates formed a single clade with Lysinimicrobium mangrovi HI08-69T, with a similarity range of 97.6-99.5 %. The peptidoglycan of the isolates was of the A4α type with an interpeptide bridge comprising Ser-Glu and an l-Ser residue at position 1 of the peptide subunit. The predominant menaquinone was demethylmenaquinone DMK-9(H4) and the major fatty acid was anteiso-C15 : 0. These chemotaxonomic characteristics corresponded to those of the genus Lysinimicrobium. On the basis of the phenotypic and phylogenetic data, along with average nucleotide identity values among the isolates, we concluded that the 13 isolates should be assigned to the following nine novel species of the genus Lysinimicrobium: Lysinimicrobium aestuarii sp. nov. (type strain HI12-104T = NBRC 109392T = DSM 28144T), Lysinimicrobium flavum sp. nov. (type strain HI12-45T = NBRC 109391T = DSM 28150T), Lysinimicrobium gelatinilyticum sp. nov. (type strain HI12-44T = NBRC 109390T = DSM 28149T), Lysinimicrobium iriomotense sp. nov. (type strain HI12-143T = NBRC 109399T = DSM 28146T), Lysinimicrobium luteum sp. nov. (type strain HI12-123T = NBRC 109395T = DSM 28147T), Lysinimicrobium pelophilum sp. nov. (type strain HI12-111T = NBRC 109393T = DSM 28148T), Lysinimicrobium rhizosphaerae sp. nov. (type strain HI12-135T = NBRC 109397T = DSM 28152T), Lysinimicrobium soli sp. nov. (type strain HI12-122T = NBRC 109394T = DSM 28151T) and Lysinimicrobium subtropicum sp. nov. (type strain HI12-128T = NBRC 109396T = DSM 28145T). In addition, an emended description of the genus Lysinimicrobium is proposed.

  9. The chemistry and pharmacology of Cleome genus: A review.

    Science.gov (United States)

    Singh, Harpreet; Mishra, Amrita; Mishra, Arun Kumar

    2018-05-01

    Since ancient times, species of Cleome genus are used to cure various ailments in human beings and same is stated in traditional treatises. Each part of the plant has its own significance, therefore, in background of its significance, upto date information in systematic manner is required. The present review embarks on variety of naturally occurring compounds that have been isolated from various species of Cleome genus. The present study furnishes an overview of all naturally isolated compounds diterpenes, triterpenoids, trinorterpenoids, flavonol glycoside, coumarinolignoids, dipyridodiazepinone, essential oils, sesquiterpenes, flavonoids, carboxylic acid derivatives, lactone derivatives, sterols and pharmacological activities of various species of Cleome genus. These plants of Cleome genus are often used as conventional drugs to treat several ailments therefore information on analgesic, anti-inflammatory, antifungal, antimicrobial, anti-diarrheal, anticancer, anti-arthritic, hepatoprotective, antinociceptive, wound healing and psychopharmacological activity etc were compiled. Literature regarding the compounds isolated and pharmacological studies performed by various researchers in the last 40 years who worked on different species belonging to genus Cleome was summarized in the present review. On the basis of references, this review covers the phytochemistry and pharmacology of Cleome species, describing compounds previously reported current trends and future prospects. From a wellbeing point of view, species belonging toCleome genus presents an excellent option for curing variety of ailments in human beings due to its isolated phytocompounds that reveal significant biological activities or for developing a variety of new pharmaceutical products. The observed pharmacological activities and no toxicity profile of extracts obtained from species of Cleome genus support the statement that these extracts might be used in the formation of new formulations that can be

  10. An investigation of self-incompatibility within the genus Restrepia.

    Science.gov (United States)

    Millner, Helen J; McCrea, Alison R; Baldwin, Timothy C

    2015-03-01

    • The genus Restrepia (Orchidaceae) is indigenous to montane rain forests of Central and South America. Recently, as habitat has fragmented and wild populations dwindled, the chances for successful cross-pollination within the genus have been reduced. Since cultivated species of Restrepia have been vegetatively propagated, they remain genetically close to those in the wild, making ex situ collections of the genus useful model populations for investigating breeding systems. Restrepia are found in clade B of the Pleurothallidinae, the only clade in which self-incompatibility (SI) has not yet been confirmed. In the current study, private collections of Restrepia were used to study the operation of SI within the genus to assist future ex situ conservation of this and related genera.• A variety of self-pollination, intraspecific, and interspecific crosses were performed across the genus, and pollen tube growth was studied.• Individual species exhibited varying degrees of SI. Self-pollinations performed across 26 species in the genus produced few viable seeds, with the exception of R. aberrans. Viable "filled" seeds with embryos were shown to require an intraspecific cross. Primary hybrids between species produced >90% seeds with embryos that germinated well.• The type of SI operating within the genus was considered to be best explained by gametophytic self-incompatibility (GSI) with interspecific variation in its phenotypic expression. The implications of these findings are discussed in relation to SI in the Pleurothallidinae and conservation strategies for Restrepia and related genera. © 2015 Botanical Society of America, Inc.

  11. Revisão taxonômica e relações filogenéticas das espécies de Roeboides grupo-microlepis (Ostariophysi, Characiformes, Characidae Taxonomic revision and phylogenetic relationships of the Roeboides microlepis species-group (Ostariophysi, Characiformes, Characidae

    Directory of Open Access Journals (Sweden)

    Carlos Alberto Santos Lucena

    2003-09-01

    Full Text Available The Roeboides microlepis species-group is revised. Four species are recognized: R. myersii Gill, 1870 from the Amazon basin, R. microlepis (Reinhardt, 1851 from river Paraguay, middle and lower river Paraná, R. araguaito sp. nov. from the river Orinoco basin, and R. margareteae sp. nov. known only from Rio Parnaíba and Pindaré-Mearim, northeastern Brazil. The type-locality of R. microlepis is restricted to river Paraguay; R. bonariensis (Steindachner, 1879 is considered a synonym of R. microlepis. The phylogenetic analysis indicates that R. myersii and R. araguaito are most parsimoniously related and may be a sister group. These two species are here considered as sister group of the monophyletic lineage which includes R. microlepis and R. margareteae. A key to the microlepis species-group genus Roeboides is given.

  12. Taxonomy of the genus Arachis (Leguminosae

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    Antonio Krapovickas

    2007-01-01

    Full Text Available Almost 100 years elapsed between Linnaeus’ naming the then lone species ofArachis (A. hypogaea L. known to Europeans, and the first taxonomic treatment of the genus by Bentham in 1841. During the next 100 years five to ten additional species descriptions appeared, assigning different species to the same names, and different names to the same species. By mid-20th Century, it was impossible to examine any herbarium collection of Arachis and assign any epithet with any assurance to any specimen (which was not a type collection except to A. hypogaea, A. guaranitica, A. tuberosa and A. villosulicarpa. In our treatment, the literature of this botanical chaos in Arachis is reviewed in detail and an assessment is made of the foundations for its occurrence. It is shown that the bases for the confusion lay in the combination of the esoteric nature of the differentiating morphological features of Arachis, the fragmentary early collections, and the representation of species by seedling specimens. Also, it is related how, in 1959, we decided to re-explore the type locality of each species then known, collect therein complete plant specimens and thereby resolve the problem. Thirty-five years, two generations of plant collectors and around 2000 collections later, we present here 69 species descriptions of Arachis, species distributed in South America east of the Andes, south of the Amazon, north of La Plata and from NW Argentina to NE Brazil. We soon discovered that the most significant characters ofArachis lay in their underground structures, including their fruits, rhizomatous stems, root systems and hypocotyls. We showed that these defining characters tended to cluster the collections into groups which were associated with generally different geographic areas and ecological features. We drew a sample of 100 collections representing these clusters, areas and features, and arranged them in a hybridization diallel and showed, in crosses between

  13. Review of the genus Craspedolcus Enderlein sensu lato in China, with the description of a new genus and four new species (Hymenoptera, Braconidae, Braconinae)

    NARCIS (Netherlands)

    Li, Y.; Achterberg, van C.; Chen, X.-x.

    2017-01-01

    A new genus is split off the genus Craspedolcus Enderlein, 1920 (Hymenoptera, Braconidae, Braconinae): Maculibracon gen. n. with type species Maculibracon abruptus sp. n. The genus Craspedolcus Enderlein sensu stricto is redefined, a key to both genera and to their species in China, Thailand and

  14. Transfer of eleven species of the genus Burkholderia to the genus Paraburkholderia and proposal of Caballeronia gen. nov. to accommodate twelve species of the genera Burkholderia and Paraburkholderia.

    Science.gov (United States)

    Dobritsa, Anatoly P; Samadpour, Mansour

    2016-08-01

    It has been proposed to split the genus Burkholderia into two genera according to phylogenetic clustering: (1) a genus retaining this name and consisting mainly of animal and plant pathogens and (2) the genus Paraburkholderia including so-called environmental bacteria. The latter genus name has been validly published recently. During the period between the effective and valid publications of the genus name Paraburkholderia, 16 novel species of the genus Burkholderiawere described, but only two of them can be classified as members of this genus based on the emended genus description. Analysis of traits and phylogenetic positions of the other 11 species shows that they belong to the genus Paraburkholderia, and we propose to transfer them to this genus. The reclassified species names are proposed as Paraburkholderia dipogonis comb. nov., Paraburkholderia ginsengiterrae comb. nov., Paraburkholderia humisilvae comb. nov., Paraburkholderia insulsa comb. nov., Paraburkholderia kirstenboschensis comb. nov., Paraburkholderia metalliresistens comb. nov., Paraburkholderia monticola comb. nov., Paraburkholderia panaciterrae comb. nov., Paraburkholderia rhizosphaerae comb. nov., Paraburkholderia solisilvae comb. nov. and Paraburkholderia susongensis comb. nov. The remaining three species are transferred to the new genus Caballeronia gen. nov. proposed to accommodate twelve species of the genera Burkholderia and Paraburkholderia forming a distinctive clade in phylogenetic trees. The new genus members are Caballeronia choica comb. nov., Caballeronia cordobensis comb. nov., Caballeronia glathei comb. nov., Caballeronia grimmiae comb. nov., Caballeronia humi comb. nov., Caballeronia megalochromosomata comb. nov., Caballeronia jiangsuensis comb. nov., Caballeronia sordidicola comb. nov., Caballeronia telluris comb. nov., Caballeronia terrestris comb. nov., Caballeronia udeis comb. nov., and Caballeronia zhejiangensis comb. nov.

  15. Genus delineation of Chlamydiales by analysis of the percentage of conserved proteins justifies the reunifying of the genera Chlamydia and Chlamydophila into one single genus Chlamydia

    NARCIS (Netherlands)

    Pannekoek, Yvonne; Qi-Long, Qin; Zhang, Yu-Zhong; van der Ende, Arie

    2016-01-01

    Many studies have aimed to set up boundaries for the classification and definition of prokaryotic genus and species classification; however, studies that focused on genus-level genomic differences for existing taxonomy systems are limited. Recently, a novel method was described for prokaryotic genus

  16. GENUS RUELLIA: PHARMACOLOGICAL AND PHYTOCHEMICAL IMPORTANCE IN ETHNOPHARMACOLOGY.

    Science.gov (United States)

    Afzal, Khurram; Uzair, Muhammad; Chaudhary, Bashir Ahmad; Ahmad, Ashfaq; Afzal, Samina; Saadullah, Malik

    2015-01-01

    Ruellia is a genus of flowering plants commonly known as Ruellias or Wild Petunias which belongs to the family Acanthaceae. It contains about 250 genera and 2500 species. Most of these are shrubs, or twining vines; some are epiphytes. Only a few species are distributed in temperate regions. They are distributed in Indonesia and Malaysia, Africa, Brazil, Central America and Pakistan. Some of these are used as medicinal plants. Many species of the genus has antinociceptive, antioxidant, analgesic, antispasmolytic, antiulcer, antidiabetic and anti-inflammatory properties. The phytochemicals constituents: glycosides, alkaloids, flavonoids and triterpenoids are present. The genus has been traditionally claimed to be used for the treatment of flu, asthma, fever, bronchitis, high blood pressure, eczema, and diabetes. The objective of this review article is to summarize all the pharmacological and phytochemical evaluations or investigations to find area of gap and endorse this genus a step towards commercial drug. Hence, further work required is to isolate and characterize the active compounds responsible for these activities in this plant and bring this genus plants to commercial health market to serve community with their potential benefits.

  17. Bioactive constituents and medicinal importance of genus Alnus.

    Science.gov (United States)

    Sati, Sushil Chandra; Sati, Nitin; Sati, O P

    2011-07-01

    The genus Alnus has been reviewed for its chemical constituents and biological activities including traditional importance of some common species. The plants of this genus contain terpenoids, flavonoids, diarylheptanoids, phenols, steroids, and tannins. Diarylheptanoids are the dominant constituents within the genus Alnus, few of them exhibited antioxidant effects and inhibitory activity against nuclear factor kappaB activation, nitric oxide and tumor necrosis factor-α production, human umbilical vein endothelial cells, farnesyl protein transferase, cell-mediated low-density lipoprotein oxidation, HIF-1 in AGS cells, and the HIV-1-induced cytopathic effect in MT-4 cells. Some ellagitannines showed hepatoprotective activity even in a dose of 1 mg/kg which is ten-fold smaller compared with the dose of traditional flavonoid-based drugs. The members of genus Alnus are well known for their traditional uses in the treatment of various diseases like cancer, hepatitis, inflammation of uterus, uterine cancer, rheumatism, dysentery, stomachache, diarrhea, fever, etc. The aim of the present review is to summarize the various researches related to the chemistry and pharmacology of genus Alnus.

  18. Higher genus partition functions of meromorphic conformal field theories

    International Nuclear Information System (INIS)

    Gaberdiel, Matthias R.; Volpato, Roberto

    2009-01-01

    It is shown that the higher genus vacuum amplitudes of a meromorphic conformal field theory determine the affine symmetry of the theory uniquely, and we give arguments that suggest that also the representation content with respect to this affine symmetry is specified, up to automorphisms of the finite Lie algebra. We illustrate our findings with the self-dual theories at c = 16 and c = 24; in particular, we give an elementary argument that shows that the vacuum amplitudes of the E 8 x E 8 theory and the Spin(32)/Z 2 theory differ at genus g = 5. The fact that the discrepancy only arises at rather high genus is a consequence of the modular properties of higher genus amplitudes at small central charges. In fact, we show that for c ≤ 24 the genus one partition function specifies already the partition functions up to g ≤ 4 uniquely. Finally we explain how our results generalise to non-meromorphic conformal field theories.

  19. Genotyping of clinical isolates of Acanthamoeba genus in Venezuela.

    Science.gov (United States)

    Wagner, Carolina; Reyes-Batlle, María; Ysea, María Alejandra Vethencourt; Pérez, Mónica V Galindo; de Rondón, Carmen Guzmán; Paduani, Anaibeth J Nessi; Pérez, Angelyseb Dorta; López-Arencibia, Atteneri; Sifaoui, Ines; de Galindo, María Virginia Pérez; de Suárez, Eva Pérez; Martínez-Carretero, Enrique; Valladares, Basilio; Piñero, José E; Lorenzo-Morales, Jacob

    2016-12-01

    Free-living amoebae of Acanthamoeba genus are opportunistic pathogens distributed worldwide. Strains included in this genus are causative agents of a fatal encephalitis and a sight-threating keratitis in humans and other animals. In this study, 550 clinical samples which were collected between 1984 and 2014 from different patients with suspected infections due to Acanthamoeba were initially screened for the presence of this amoebic genus at the Laboratorio de Amibiasis-Escuela de Bioanálisis at the Universidad Central de Venezuela. Samples were cultured in 2% Non-Nutrient agar plates seeded with a layer of heat killed Escherichia coli. From the 550 clinical samples included in this study, 18 of them were positive for Acanthamoeba genus after culture identification. Moreover, positive samples were confirmed after amplification of the Diagnostic Fragment 3 (DF3) of the Acanthamoeba18S rDNA genus and sequencing was carried out in order to genotype the isolated strains of Acanthamoeba. Furthermore, the pathogenic potential of the strains was checked by performing thermotolerance and osmotolerance assays. Sequencing of the DF3 region resulted in the identification of genotype T4 in all the isolated strains. Moreover, most isolates were thermotolerant or both thermotolerant and osmotolerant and thus were classified as potentially pathogenic strains. To the best of our knowledge, this is the first report on the molecular characterization at the genotype level of Acanthamoeba strains in Venezuela.

  20. Influência do nível hidrológico sobre a dieta de Leporinus reinhardtii (Characiformes, Anostomidae em um reservatório do semiárido brasileiro

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    Tatiane N. Medeiros

    2014-09-01

    Full Text Available A Região Neotropical possui um elevado número de espécies de peixes de água doce, cujas adaptações para explorar diferentes tipos de alimento é particularmente evidente em reservatórios, refletindo numa considerável plasticidade alimentar. Characiformes é a mais diversificada ordem de peixes da região, tendo Anostomidae como uma das famílias mais especiosas, com destaque para Leporinus, com cerca de 80 espécies válidas. Embora suas espécies sejam consideradas primordialmente onívoras, algumas apresentam dieta herbívora, e a plasticidade alimentar do gênero é uma característica comum em ambientes sujeitos a variação sazonal de nível da água. No presente trabalho, são analisadas a composição da dieta de Leporinus reinhardtii Lütken, 1875 no reservatório de Sobradinho e a influência da variação sazonal de seu nível sobre a mesma ao longo de três ciclos anuais (2006-2009. Dentre os 876 indivíduos analisados, 302 foram coletados no período de seca e 574 no de cheia. A dieta foi composta por 47 itens, agrupados em nove categorias: Moluscos, Microcrustáceos, Insetos, Insetos (partes, Chironomidae, Vegetais, Sementes, Sedimento e Outros. Chironomidae representou em média 60% do peso total das categorias alimentares, seguido de Sementes com 25% e as demais categorias com menos de 10%. No período de cheia, nos trechos lêntico e de transição, predominaram Sementes na dieta, tendo Chironomidae sido mais representativa no trecho lótico, e as demais categorias não ultrapassando 20% de participação nos três trechos neste período. No período de seca, houve diferença nos itens predominantes, com predominância de Insetos no trecho lêntico, principalmente Coleoptera, e de Vegetais no lótico, com maior participação de macrófitas aquáticas, algas filamentosas, clorofíceas e da diatomácea Oscillatoria. Já no trecho de transição, Microcrustáceos dominaram na dieta, diferindo dos demais trechos. A dieta de

  1. Desempeño de los sistemas acuícolas de recirculación en el cultivo intensivo del Pacú Piaractus mesopotamicus(Characiformes: Characidae

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    Omar Domínguez Castanedo

    2012-03-01

    Full Text Available Una alternativa que permite intensificar la producciónacuícola, y reducir el impacto ambiental y los gastosde operación son los sistemas acuícolas de recirculación(SAR. Se evaluó el desempeño de SAR AquaticEcosystems® en el cultivo ornamental de Piaractus mesopotamicus,y se estimó el crecimiento y la calidad del agua,con dos alimentos comerciales de 18 (T1 y 28% (T2 deproteínas. Del crecimiento se midieron quincenalmente:la longitud patrón, altura máxima, peso y factor de condiciónmúltiple (KM. De la calidad de agua se evaluósemanalmente, O.D., NH3-NH4, pH, NO2, NO3, KH y PO4.Con el modelo de Timmons-Ebeling se calculó la tasa deproducción de NH3-N. Los resultados muestran diferenciassignificativas en el peso, donde T2 presentó un incrementode 7.14% más que T1, que mostró un mayor KM. La calidad del agua fue adecuada en los parámetros limitantes(OD=T1: 4.23±1.23; T2: 4.13±0.86; NH3=T1: 0.02±0.02;T2: 0.06±0.10, a excepción del pH (T1: 6.95±0.98; T2:7.11±1.03 que presentó valores letales (Performance of recirculating aquaculture systems in the intensive farming of Pacú Piaractus mesopotamicus (Characiformes: Characidae. An alternative to intensify fish production, reducing the environmentalimpact and production costs are recirculating aquaculture systems (RAS. The performance of a RASwas evaluated, as fish growth and water quality conditions, in a culture of Piaractus mesopotamicus reared forornamental purposes. Two commercial food brands with different protein contents (18%-TI and 28%-T2, weregiven to juvenile fishes during an eight weeks period. Growth was measured bi-weekly: standard length (Lp,peak height (A, weight and multiple condition factor (KM. The evaluation of water parameters included: dissolvedoxygen, NH3-NH4, pH, NO2, NO3, KH carbonate hardness and PO4. NH3-N rate production was analyzedfollowing Timmons-Ebeling model. Results demonstrated significant differences in weight only, and T2 showeda 7

  2. Variabilidad genética de Brycon henni (Characiformes: Characidae en la cuenca media de los ríos Nare y Guatapé, sistema Río Magdalena, Colombia

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    Julio César Hurtado-Alarcón

    2011-03-01

    Full Text Available Brycon henni es una especie nativa de la cuenca del río Magdalena, Colombia, donde es fuertemente explotada, por lo cual en este trabajo se estudió la variabilidad genética y estructura poblacional en individuos provenientes de la cuenca media de los ríos Nare y Guatapé, Antioquia. Se recolectaron 195 ejemplares y se les extrajo ADN genómico total del tejido muscular y/o sanguíneo. Se evaluaron 14 cebadores para la técnica RAPD (Random Amplifyed Polimorphic DNA, siendo cuatro de ellos polimórficos, los cuales generaron 66 fragmentos diferentes (63% polimorfismo. Por medio de un análisis de varianza molecular (AMOVA, se determinó la estructuración poblacional para todos los sitios evaluados y la cuenca del río Nare ( ΦST =0.297 y ΦST =0.163, respectivamente. Las distancias genéticas de Nei mostraron que todas las poblaciones diferían entre sí y que la mayor diferenciación genética se dio para las poblaciones del río Guatapé y la quebrada El Cardal. Un test de Mantel mostró correlación entre las distancias genéticas y geográficas (ambas cuencas, r=0.431; cuenca del río Nare, r=0.377. Esto sugiere aislamiento por distancia y separación de grupos genéticos producidos por los embalses sobre los ríos Nare y Guatapé, lo cual puede tener implicaciones relevantes en la conservación de la variabilidad genética de las poblaciones naturales de esta especie en el oriente antioqueño.Genetic variability of Brycon henni (Characiformes: Characidae in the middle basin of Nare and Guatapé rivers, Magdalena River system, Colombia. Brycon henni is a native species in Magdalena´s River basin, and because of its cultural and economic importance, is strongly overexploited. This study aimed to describe the genetic variability and population structure of this species from Nare and Guatapé rivers basins. A total of 195 individuals were collected and DNA extractions were obtained from muscle and blood tissue. Fourteen primers were

  3. Guyanagarika, a new ectomycorrhizal genus of Agaricales from the Neotropics.

    Science.gov (United States)

    Sánchez-García, Marisol; Henkel, Terry W; Aime, Mary Catherine; Smith, Matthew E; Matheny, Patrick Brandon

    2016-12-01

    A new genus and three new species of Agaricales are described from the Pakaraima Mountains of Guyana in the central Guiana Shield. All three of these new species fruit on the ground in association with species of the ectomycorrhizal (ECM) tree genus Dicymbe (Fabaceae subfam. Caesalpinioideae) and one species has been shown to form ectomycorrhizas. Multi-locus molecular phylogenetic analyses place Guyanagarika gen. nov. within the Catathelasma clade, a lineage in the suborder Tricholomatineae of the Agaricales. We formally recognize this 'Catathelasma clade' as an expanded family Catathelasmataceae that includes the genera Callistosporium, Catathelasma, Guyanagarika, Macrocybe, Pleurocollybia, and Pseudolaccaria. Within the Catathelasmataceae, Catathelasma and Guyanagarika represent independent origins of the ectomycorrhizal habit. Guyanagarika is the first documented case of an ECM Agaricales genus known only from the Neotropics. Copyright © 2016 British Mycological Society. Published by Elsevier Ltd. All rights reserved.

  4. Genus-2 free energy of the closed bosonic string

    International Nuclear Information System (INIS)

    Leblanc, Y.

    1989-01-01

    Making use of the recently developed real-time finite-temperature formalism for string theory, we obtain an explicit expression for the Helmholtz free energy of a closed-bosonic-string gas in the genus-2 approximation. Our computation takes advantage of the modern Becchi-Rouet-Stora-Tyutin-invariant operator formalism for multiloop amplitudes and can be readily extended to arbitrary genus. We find some disagreement with previous results obtained through the imaginary-time (compactification) technique extended to higher-genus Riemann surfaces. Our comparison with the imaginary-time formalism is based on the McClain-Roth theorem. We mention a possible remedy to the latter technique in order to get correct results

  5. Higher genus correlators for the complex matrix model

    International Nuclear Information System (INIS)

    Ambjorn, J.; Kristhansen, C.F.; Makeenko, Y.M.

    1992-01-01

    In this paper, the authors describe an iterative scheme which allows us to calculate any multi-loop correlator for the complex matrix model to any genus using only the first in the chain of loop equations. The method works for a completely general potential and the results contain no explicit reference to the couplings. The genus g contribution to the m-loop correlator depends on a finite number of parameters, namely at most 4g - 2 + m. The authors find the generating functional explicitly up to genus three. The authors show as well that the model is equivalent to an external field problem for the complex matrix model with a logarithmic potential

  6. Genetic variability assessment in the genus Passiflora by SSR markers

    Directory of Open Access Journals (Sweden)

    Claudia Lougon Paiva

    2014-09-01

    Full Text Available The genus Passiflora encompasses many species that are endemic to the Brazilian territory, including some with economic value. Studies on genetic diversity in this genus are fundamental because they allow understanding genetic variability and distance. The present study aimed to determine the genetic variability and distances among 10 species of the genus Passiflora by using microsatellite markers (Simple Sequence Repeat, SSR. Twenty-eight heterologous microsatellite markers were tested, but only 12 were used in the diversity analysis because they amplified in at least 80% of the species. A clear separation was observed among the subgenuses studied, as well as wide variation among the accessions of Passiflora. This knowledge enables breeders to explore diversity and transfer favorable alleles found in wild species.

  7. Rapid identification of Zygosaccharomyces with genus-specific primers.

    Science.gov (United States)

    Hulin, Michelle; Wheals, Alan

    2014-03-03

    There has been a recent and rapid increase in the number of species of the genus Zygosaccharomyces which now comprises Z. bailii, Z. bisporus, Z. gambellarensis, Z. kombuchaensis, Z. lentus, Z. machadoi, Z. mellis, Z. parabaillii, Z. pseudobailii, Z. pseudorouxii, Z. rouxii, Z. sapae, and Z. siamensis. Z. pseudorouxii is an unofficial name given to isolates closely related to the newly-described species Z. sapae. The Zygosaccharomyces genus contains species that are important as food and beverage spoilage organisms and others are associated with fermentations and sweet foodstuffs, such as honey. Their economic significance means that the ability to identify them rapidly is of significant importance. Although Z. rouxii and Z. bailii have been genome-sequenced the extent of sequence data for the others, especially the newly-discovered species, is sometimes extremely limited which makes identification slow. However, parts of the ITS1/5.8S/ITS2 rDNA region contain sequences of sufficient similarity within the genus and of sufficient difference with outgroups, to be potential regions for the design of genus-wide specific primers. We report here the development of genus-specific primers that can detect all the major Zygosaccharomyces species including all those associated with foods; the rare and localised species Z. machadoi and Z. gambellarensis are not detected. The size of the single amplicon produced varies between species and in some cases is sufficiently different to assign provisional species identification. Sequence data from rDNA regions are available for virtually all described yeast species in all genera, thus, prior to having sufficient sequence data from structural genes, rDNA regions may provide more generally suitable candidates for both genus-specific and species-specific primer design. Copyright © 2013 Elsevier B.V. All rights reserved.

  8. Comparative Genomics Reveals High Genomic Diversity in the Genus Photobacterium.

    Science.gov (United States)

    Machado, Henrique; Gram, Lone

    2017-01-01

    Vibrionaceae is a large marine bacterial family, which can constitute up to 50% of the prokaryotic population in marine waters. Photobacterium is the second largest genus in the family and we used comparative genomics on 35 strains representing 16 of the 28 species described so far, to understand the genomic diversity present in the Photobacterium genus. Such understanding is important for ecophysiology studies of the genus. We used whole genome sequences to evaluate phylogenetic relationships using several analyses (16S rRNA, MLSA, fur , amino-acid usage, ANI), which allowed us to identify two misidentified strains. Genome analyses also revealed occurrence of higher and lower GC content clades, correlating with phylogenetic clusters. Pan- and core-genome analysis revealed the conservation of 25% of the genome throughout the genus, with a large and open pan-genome. The major source of genomic diversity could be traced to the smaller chromosome and plasmids. Several of the physiological traits studied in the genus did not correlate with phylogenetic data. Since horizontal gene transfer (HGT) is often suggested as a source of genetic diversity and a potential driver of genomic evolution in bacterial species, we looked into evidence of such in Photobacterium genomes. Genomic islands were the source of genomic differences between strains of the same species. Also, we found transposase genes and CRISPR arrays that suggest multiple encounters with foreign DNA. Presence of genomic exchange traits was widespread and abundant in the genus, suggesting a role in genomic evolution. The high genetic variability and indications of genetic exchange make it difficult to elucidate genome evolutionary paths and raise the awareness of the roles of foreign DNA in the genomic evolution of environmental organisms.

  9. Ethnomedicinal uses, phytochemistry and pharmacological properties of the genus Boerhavia.

    Science.gov (United States)

    Patil, Kapil S; Bhalsing, Sanjivani R

    2016-04-22

    The genus Boerhavia is widely distributed in tropical, subtropical and temperate regions of the world including Mexico, America, Africa, Asia, Indian Ocean Islands, Pacific Islands and Australia. The genus Boerhavia is extensively used by local peoples and medicinal practitioners for treatments of hepatitis, urinary disorders, gastro intestinal diseases, inflammations, skin problems, infectious diseases and asthma. Present review focused on traditional uses, phytochemistry, pharmacology and toxicology of Boerhavia genus to support potential scope for advance ethnopharmacological study. Information on the Boerhavia species was collected from classical books on medicinal plants, pharmacopoeias and scientific databases like PubMed, Scopus, GoogleScholar, Web of Science and others. Also scientific literatures based on ethnomedicinal surveys, Ph.D. and M.Sc. dissertations, published papers from Elsevier, Taylor and Francis, Springer, ACS as well as Wiley publishers and reports by government bodies and documentations were assessed. A total of 180 compounds from Boerhavia genus were isolated of which B. diffusa alone shared around 131 compounds and for most of which it is currently an exclusive source. In the genus, phenolic glycosides and flavonoids contribute approximately 97 compounds. These includes eupalitin, rotenoids like boeravinones, coccineons, alkaloid i.e. betanin and punarnavine etc., showing vital pharmaceutical activities such as anticancer, anti-inflammatory, antioxidant and immunomodulatory. Boerhavia is an important genus with wide range of medicinal uses. However, most of the available scientific literatures have lacked relevant doses, duration and positive controls for examining bioefficacy of extracts and its active compounds. In some studies, taxonomic errors were encountered. Moreover, there is need for accurate methods in testing the safety and ethnomedicinal validity of Boerhavia species. Copyright © 2016. Published by Elsevier Ireland Ltd.

  10. Revisiting the genus Photobacterium: taxonomy, ecology and pathogenesis.

    Science.gov (United States)

    Labella, Alejandro M; Arahal, David R; Castro, Dolores; Lemos, Manuel L; Borrego, Juan J

    2017-03-01

    The genus Photobacterium, one of the eight genera included in the family Vibrionaceae, contains 27 species with valid names and it has received attention because of the bioluminescence and pathogenesis mechanisms that some of its species exhibit. However, the taxonomy and phylogeny of this genus are not completely elucidated; for example, P. logei and P. fischeri are now considered members of the genus Aliivibrio, and previously were included in the genus Vibrio. In addition, P. damselae subsp. piscicida was formed as a new combination for former Vibrio damsela and Pasteurella piscicida. Moreover, P. damselae subsp. damselae is an earlier heterotypic synonym of P. histaminum. To avoid these incovenences draft and complete genomic sequences of members of Photobacterium are increasingly becoming available and their use is now routine for many research laboratories to address diverse goals: species delineation with overall genomic indexes, phylogenetic analyses, comparative genomics, and phenotypic inference. The habitats and isolation source of the Photobacterium species include seawater, sea sediments, saline lake waters, and a variety of marine organisms with which the photobacteria establish different relationships, from symbiosis to pathogenic interactions. Several species of this genus contain bioluminescent strains in symbiosis with marine fish and cephalopods; in addition, other species enhance its growth at pressures above 1 atmosphere, by means of several high-pressure adaptation mechanisms and for this, they may be considered as piezophilic (former barophilic) bacteria. Until now, only P. jeanii, P. rosenbergii, P. sanctipauli, and the two subspecies of P. damselae have been reported as responsible agents of several pathologies on animal hosts, such as corals, sponges, fish and homeothermic animals. In this review we have revised and updated the taxonomy, ecology and pathogenicity of several members of this genus. [Int Microbiol 20(1): 1-10 (2017

  11. Revision of the genus Endochilus Weise (Coleoptera: Coccinellidae: Chilocorini).

    Science.gov (United States)

    Łączyński, Piotr; Tomaszewska, Wioletta

    2014-05-20

    The members of the endemic African genus Endochilus Weise, 1898 (Coleoptera: Coccinellidae: Chilocorini) are redescribed, diagnosed, and illustrated. Lectotypes are designated for Endochilus compater Weise, Endochilus minor Weise, Endochilus plagiatus Sicard, Endochilus rubicundus Weise, and Endochilus styx Sicard. One new species is described: Endochilus abdominalis sp nov. Notes on the genus and nomenclatural history for each species are provided. A key for identification of all species is presented. Adult characters concerning similarities of Endochilus to other genera of African Chilocorini are discussed. This is an open access paper. We use the Creative Commons Attribution 3.0 license that permits unrestricted use, provided that the paper is properly attributed.

  12. Review of the genus Agria (Diptera, Sarcophagidae from China

    Directory of Open Access Journals (Sweden)

    Ming Zhang

    2013-06-01

    Full Text Available Agria mihalyii (Rohdendorf and Verves, 1978 is recorded from China for the first time, and both sexes are thoroughly documented using a combination of illustrations, photographs and scanning electron microscopy images. The generic affiliation is corroborated from an expanded definition of genus Agria Robineau-Desvoidy, 1830, and a key to males of the two known species from China is provided. The distribution of coeloconic sensilla on the male pre- and postgonite are shown to possess significant diagnostic and phylogenetic information in this genus.

  13. Revision of the genus Altitatiayus Weinreich(Coleoptera, Lucanidae, Lucaninae

    Directory of Open Access Journals (Sweden)

    Paschoal C. Grossi

    2010-01-01

    Full Text Available Revision of the genus Altitatiayus Weinreich (Coleoptera, Lucanidae, Lucaninae. The South American genus Altitatiayus Weinreich is revised and now includes six species, A. rotundatus (Boileau, A. ruficollis (Lüderwaldt, A. godinhorum (Bomans & Arnaud, A. dulceae (Bomans & Arnaud, A. trifurcatus (Grossi & Racca-Filho and A. koikei sp. nov. (Minas Gerais, Brazil. All species are described and illustrated. For the first time male and female genitalia are illustrated for five species and observations on the behavior of two species are included.

  14. Evolution of the leukotoxin operon in genus Mannheimia

    DEFF Research Database (Denmark)

    Larsen, J.; Pedersen, A. G.; Christensen, H.

    2005-01-01

    The leukotoxin protein of Mannheimia haemolytica belongs to the HlyA-like subfamily of cytotoxic RTX (repeats in toxin) proteins. To test the hypothesis that different lineages of genus Mannheimia gained the leukotoxin operon via horizontal gene transfer we used a strategy that combines compositi......The leukotoxin protein of Mannheimia haemolytica belongs to the HlyA-like subfamily of cytotoxic RTX (repeats in toxin) proteins. To test the hypothesis that different lineages of genus Mannheimia gained the leukotoxin operon via horizontal gene transfer we used a strategy that combines...

  15. Bioactive Natural Products of Marine Sponges from the Genus Hyrtios

    Directory of Open Access Journals (Sweden)

    Nourhan Hisham Shady

    2017-05-01

    Full Text Available Marine sponges are known as a rich source for novel bioactive compounds with valuable pharmacological potential. One of the most predominant sponge genera is Hyrtios, reported to have various species such as Hyrtios erectus, Hyrtios reticulatus, Hyrtios gumminae, Hyrtios communis, and Hyrtios tubulatus and a number of undescribed species. Members of the genus Hyrtios are a rich source of natural products with diverse and valuable biological activities, represented by different chemical classes including alkaloids, sesterterpenes and sesquiterpenes. This review covers the literature until June 2016, providing a complete survey of all compounds isolated from the genus Hyrtios with their corresponding biological activities whenever applicable.

  16. The genus cicerbita wallr. (cichorieae- asteraceae) in Pakistan and Kashmir

    International Nuclear Information System (INIS)

    Bano, R.; Qaiser, M.; Roohi, B.

    2010-01-01

    The genus Cicerbita Wallr. of the tribe Cichorieae-Asteraceae is revised for Pakistan and Kashmir. A broader generic concept of the genus is accepted and in all 11 species have been recognized including 3 new species viz. Cicerbita astorensis, Roohi Bano and Qaiser, C. alii, Roohi Bano and Qaiser and C. gilgitensis Roohi Bano and Qaiser. 5 new combinations, including 3 at species and 2 at varietal level have also been proposed. An artificial key to all the species is provided. Latin diagnosis, illustrations of newly described species, world wide and local distribution and ecological notes of all the species are also furnished. (author)

  17. Holographic partition functions and phases for higher genus Riemann surfaces

    International Nuclear Information System (INIS)

    Maxfield, Henry; Ross, Simon F; Way, Benson

    2016-01-01

    We describe a numerical method to compute the action of Euclidean saddle points for the partition function of a two-dimensional holographic CFT on a Riemann surface of arbitrary genus, with constant curvature metric. We explicitly evaluate the action for the saddles for genus two and map out the phase structure of dominant bulk saddles in a two-dimensional subspace of the moduli space. We discuss spontaneous breaking of discrete symmetries, and show that the handlebody bulk saddles always dominate over certain non-handlebody solutions. (paper)

  18. Large N elliptic genus and AdS/CFT Correspondence

    International Nuclear Information System (INIS)

    Boer, Jan de

    1998-01-01

    According to one of Maldacena's dualities, type IIB string theory on AdS 3 x S 3 x K3 is equivalent to a certain N = (4, 4) superconformal field theory. In this note we compute the elliptic genus of the boundary theory in the supergravity approximation. A finite quantity is obtained once we introduce a particular exclusion principle. In the regime where the supergravity approximation is reliable, we find exact agreement with the elliptic genus of a sigma model with target space K3 N /S N

  19. The genus Boschniakia in China: An ethnopharmacological and phytochemical review.

    Science.gov (United States)

    Zhang, Le; Zhao, Yunshan; Wang, Zhipeng A; Wei, Kunhua; Qiu, Bin; Zhang, Chunhong; Wang-Müller, QiYan; Li, Minhui

    2016-12-24

    As a group of important medicine plants, Boschniakia rossica (Cham. et Schltdl) Fedtsch. and B. himalaica Hook.f.et Thoms, which are the only two species in the genus Boschniakia (Orobanchaceae), have long been used in traditional Chinese medicine for their multiple therapeutic uses related to enhanced renal function, erectile dysfunction, defaecate and hepatoprotective. Additionally, the two species are also used as dietary supplements in wine, cosmetics, and other healthy food. By providing comprehensive information and data of genus Boschniakia on botany, traditional medicinal uses, phytochemistry, pharmacological research and toxicology, this review aims to summary the group of natural compounds from Boschniakia discovered so far. The other aims are to reference research findings of their biological activities and functions in medicine, physiology, and cell biology to highlight the compound candidates which can be used for further drug discovery in several pharmaceutical areas including antioxidation, anticancer, anti-inflammation, anti-senile, and immunology. All of the available information on B. rossica and B. himalaica was collected from the electronic resources (such as PubMed, SciFinder Scholar, CNKI, TPL (www.theplantlist.org), Google Scholar, Baidu Scholar, and Web of Science). After a comprehensive analysis of the literatures from available online sources, the results show that both species of genus Boschniakia are valuable and popular herbal medicines with potentials to cure various ailments. The phytochemical studies revealed that the chemical compositions of this genus were mainly iridoid glycosides and phenylpropanoid glycosides. To date, 112 compounds have been isolated from the genus, while their crude extracts and purified compounds have been found to possess a wide range of biological activities including anti-senile, antitumor and anticancer, anti-inflammatory, protecting liver, boost memory, anti-oxidation, anti-lipid peroxidative, and

  20. Anthoporia, a new genus in the Polyporales (Agaricomycetes

    Directory of Open Access Journals (Sweden)

    Karasiński Dariusz

    2016-07-01

    Full Text Available A new genus, Anthoporia Karasiński & Niemelä, is proposed for the brown-rot polypore Polyporus albobrunneus Romell [= Antrodia albobrunnea (Romell Ryvarden]. The new genus is separated from Antrodia P. Karst. s.str. in several morphological features, and it is only distantly related to Antrodia serpens (Fr. P. Karst. (generic type of Antrodia in recently published phylogenies. Additionally, Anthoporia albobrunnea (Romell Karasiński & Niemelä is described and illustrated based on material collected in Białowieża National Park in northeastern Poland.

  1. Identification of mip-like genes in the genus Legionella

    DEFF Research Database (Denmark)

    Cianciotto, N P; Bangsborg, Jette Marie; Eisenstein, B I

    1990-01-01

    in the genus Legionella, a large panel of Legionella strains was examined by Southern hybridization and immunoblot analyses for the presence and expression of mip-related sequences. Strains representing all 14 serogroups of L. pneumophila contained a mip gene and expressed a 24-kilodalton Mip protein. Although...... with specific Mip antisera. Moreover, the cloned mip analog from Legionella micdadei encoded the cross-reactive protein. Thus, mip is conserved and specific to L. pneumophila, but mip-like genes are present throughout the genus, perhaps potentiating the intracellular infectivity of all Legionella species....

  2. N=2 gauged WZW models and the elliptic genus

    International Nuclear Information System (INIS)

    Henningson, M.

    1994-01-01

    Witten recently gave further evidence for the conjectured relationship between the A-series of the N = 2 minimal models and certain Landau-Ginzburg models by computing the elliptic genus for the latter. The results agree with those of the N = 2 minimal models, as can be calculated from the known characters of the discrete series representations of the N = 2 superconformal algebra. The N = 2 minimal models also have a lagrangian representation as supersymmetric gauged WZW models. We calculate the elliptic genera, interpreted as a genus one path integral with twisted boundary conditions, for such models and recover the previously known result. (orig.)

  3. Genus Phyllanthus for chronic hepatitis B virus infection

    DEFF Research Database (Denmark)

    Liu, J; Lin, Haili; McIntosh, H

    2001-01-01

    To evaluate the efficacy and safety of genus Phyllanthus for chronic hepatitis B virus (HBV) infection we performed a systematic review of randomized clinical trials. Randomized trials comparing genus Phyllanthus vs. placebo, no intervention, general nonspecific treatment, other herbal medicine.......85-17.21) compared with placebo or no intervention. There was no significant difference on clearance of serum HBsAg, HBeAg and HBV DNA between Phyllanthus and IFN. Phyllanthus species were better than nonspecific treatment or other herbal medicines for the clearance of serum HBsAg, HBeAg, HBV DNA, and liver enzyme...

  4. Nitrite Contents in Fresh Vegetables of Different Families and Genus

    Science.gov (United States)

    Cui, Yuqian; Li, Xiao; Xu, Lingyi; Pang, Meixia; Qi, Jinghua; Wang, Fang

    2017-12-01

    The aim of this study is firstly aimed at investigating the contents of nitrite in common consumed vegetables according to families and genus classification. The vegetables were randomly collected and analyzed in quartile sampling according to GB5009.30-2016. The vegetables were analyzed by the software of Spss20.0 and statistically significant Duncan multiple comparisons. The data indicates that the nitrite contents in different families and different genus vegetables in same family were significant (Pcorn kernels (0.7119mg/kg dry weight), Lotus root (0.592mg/kg dry weight).

  5. Advances in Chemistry and Bioactivity of the Genus Chisocheton Blume.

    Science.gov (United States)

    Shilpi, Jamil A; Saha, Sanjib; Chong, Soon-Lim; Nahar, Lutfun; Sarker, Satyajit D; Awang, Khalijah

    2016-05-01

    Chisocheton is one of the genera of the family Meliaceae and consists of ca. 53 species; the distribution of most of those are confined to the Indo-Malay region. Species of broader geographic distribution have undergone extensive phytochemical investigations. Previous phytochemical investigations of this genus resulted in the isolation of mainly limonoids, apotirucallane, tirucallane, and dammarane triterpenes. Reported bioactivities of the isolated compounds include cytotoxic, anti-inflammatory, antifungal, antimalarial, antimycobacterial, antifeedant, and lipid droplet inhibitory activities. Aside from chemistry and biological activities, this review also deals briefly with botany, distribution, and uses of various species of this genus. © 2016 Verlag Helvetica Chimica Acta AG, Zürich.

  6. Evolution of the Leukotoxin Operon in Genus Mannheimia

    DEFF Research Database (Denmark)

    Larsen, Jesper; Pedersen, Anders Gorm; Christensen, Henrik

    The leukotoxin protein of Mannheimia haemolytica belongs to the HlyA-like subfamily of cytotoxic RTX (repeats in toxin) proteins. To test the hypothesis that different lineages of genus Mannheimia gained the leukotoxin operon via horizontal gene transfer we used a strategy that combines compositi......The leukotoxin protein of Mannheimia haemolytica belongs to the HlyA-like subfamily of cytotoxic RTX (repeats in toxin) proteins. To test the hypothesis that different lineages of genus Mannheimia gained the leukotoxin operon via horizontal gene transfer we used a strategy that combines...

  7. Fricke Lie algebras and the genus zero property in Moonshine

    Science.gov (United States)

    Carnahan, Scott

    2017-10-01

    We give a new, simpler proof that the canonical actions of finite groups on Fricke-type Monstrous Lie algebras yield genus zero functions in generalized Monstrous Moonshine, using a Borcherds-Kac-Moody Lie algebra decomposition due to Jurisich. We describe a compatibility condition, arising from the no-ghost theorem in bosonic string theory, that yields the genus zero property. We give evidence for and against the conjecture that such a compatibility for symmetries of the Monster Lie algebra gives a characterization of the Monster group.

  8. On the identity of two new species of the genus coleoscirus (acari: cunaxidae) with annotations on the genus from pakistan

    International Nuclear Information System (INIS)

    Bashir, M.H.; Ashfaq, M.

    2008-01-01

    Adult females of two new Cunaxid mites, Coleoscirus raviensis n.sp. and Coleoscirus tobaensis n.sp. were collected during the taxonomic exploration of the mite fauna of the family Cunaxidae from Punjab- Pakistan. The new species were compared with 9 already describes species of the same genus from Pakistan. A Comprehensive key of all the known species of this genus from Pakistan has been prepared to incorporate the new species. A ceremonial description and illustration of main body characteristics, geographical distribution, host range and distinguishing remarks are also given. (author)

  9. The Lesser Antillean scorpions of the genus Centruroides

    NARCIS (Netherlands)

    Armas, de Luis F.

    1983-01-01

    The buthid scorpions of the genus Centruroides are widely distributed in the Antillean area. They are also the most common scorpions in the majority of these islands. Nevertheless they remained almost forgotten until recently (STAHNKE 1970; ARMAS 1976, 1977, 1980, 1981, 1982; FRANCKE & SISSOM 1980).

  10. Screening genus Penicillium for producers of cellulolytic and xylanolytic enzymes

    DEFF Research Database (Denmark)

    Krogh, Kristian Bertel Rømer; Mørkeberg, Astrid; Frisvad, Jens Christian

    2004-01-01

    genus Penicillium and compared with that of T. reesei. Either Solka-Floc cellulose or oat spelt xylan was used as carbon source in shake flask cultivations. All the fungi investigated showed coinduction of cellulolytic and xylanolytic enzymes during growth on cellulose as well as on xylan. The highest...... filter paper activity was measured after cultivation of Penicillium brasilianum IBT 20888 on cellulose....

  11. Species and genetic diversity in the genus Drosophila inhabiting the ...

    Indian Academy of Sciences (India)

    Genus Drosophila belongs to the family Drosophilidae (class Insecta, order Diptera), characterized by rich species diversity at global level and also in India, which is a megadiverse country. At global level, more than 1500 species have been described and several thousands estimated. Hawaiian Islands are particularly rich ...

  12. Contribution to the genus Xanthocorus Miyatake (Coleoptera, Coccinellidae, Chilocorini

    Directory of Open Access Journals (Sweden)

    Wenjing Li

    2015-07-01

    Full Text Available The genus Xanthocorus Miyatake, 1970 consists of three species from China, including two new species described here: X. nigrosuturalis sp. n. and X. mucronatus sp. n. A key to identification of species is given. Diagnoses, detailed descriptions, illustrations, and distributions are provided.

  13. Biological advances in Bergenia genus plant | Zhang | African ...

    African Journals Online (AJOL)

    Bergenia, a genus belonging to Saxifragaceae family, is one of the most important medicinal plants, has high application values for human. Currently, wild Bergenia is becoming lacking, due to destruction of ecological environment and excessive excavation; furthermore, the study on it is not deep enough, many related ...

  14. A molecular phylogeny of selected species of Genus Prunus L ...

    African Journals Online (AJOL)

    Administrator

    2011-05-30

    May 30, 2011 ... The genus Prunus L. is an important plant for fruit production and it includes plums, apricots, cherries, almonds and peaches that are sources of food for the local people. The family Rosaceae is not yet published in Flora of Pakistan and there is a lot of taxonomic work that is yet to be done for the proper.

  15. The genus Calvatia ('Gasteromycetes', Lycoperdaceae): A review of ...

    African Journals Online (AJOL)

    Several members of the fungal puffball genus Calvatia Fr. have found widespread use amongst various cultures world-wide, especially as sources of food and/or traditional medicine. Hitherto the biotechnological potential of only a handful of Calvatia species, namely C. cyathiformis, C. craniiformis, C. excipuliformis, C.

  16. The genus Xiphinema in southern Africa. XI. Description of ...

    African Journals Online (AJOL)

    The genus Xiphinema in southern Africa. XI. Description of Xiphinema stockeri n. sp. from. Botswana (Nematoda: Dorylaimida). J.C. de W. Kruger and J. Heyns. Department of Zoology, Rand Afrikaans University, Johannesburg. Xiphinema stockeri n. sp. is described from Botswana The new species is characterized by an ...

  17. Phylogenetic and genomic relationships in the genus Malus based ...

    African Journals Online (AJOL)

    STORAGESEVER

    2009-08-04

    Aug 4, 2009 ... Phylogenetic and genomic relationships in the genus. Malus based on RAPDs. Ogunkanmi Liasu Adebayo2*, Oboh Bola2, Williams Opeyemi2, Monu Gloria2 and Ogundipe. Olowatoyin Temitope1. 1Botany and Microbiology Department, University of Lagos, Nigeria. 2Cell Biology and Genetics Department ...

  18. A new southern African genus in the holothurian family ...

    African Journals Online (AJOL)

    A new genus Roweia in the holothurian family Cucumariidae is erected to accommodate two southern African dendrochi-rotids, Cucumaria frauenfeldi Ludwig and C. stephensoni John which have previously always been classified in Cucumaria (si). Some intraspecific variations in R. frauenfeldi are discussed and, on this ...

  19. North-West Indian fauna of genus Macrobathra Meyrick ...

    African Journals Online (AJOL)

    Two first representative species of genus Macrobathra Meyrick viz., gentilis Meyrick and ochrefasciata sp. nov. are reported from three inadequately surveyed North-West Indian states, namely Haryana, Himachal Pradesh and Rajasthan. With the addition of another new species, total number of species under the ...

  20. A molecular phylogeny of selected species of Genus Prunus L ...

    African Journals Online (AJOL)

    A molecular phylogeny of selected species of Genus Prunus L. (Rosaceae) from Pakistan using the TRN-L & TRN-F spacer DNA. ... D.A. Webb. (Syn. Prunus amygdalus) and Prunus cornuta (Wall. ex. Royle) Steudel. which are indigenous to Pakistan. Key Words: Prunus, chloroplast, TRN-L, TRN-F, Pakistan.

  1. The genus Typhonium (Araceae-Areae) in Australasia

    NARCIS (Netherlands)

    Hay, A.

    1993-01-01

    The genus Typhonium (Araceae-Areae) is revised for Australasia. Fourteen species are recognised. Two are introduced. Of the twelve indigenous, eleven are endemic to the region. Six aré new to science. Typhonium millarii F.M. Bailey is reduced to synonymy with T. angustilobum F. Muell. Illustrations

  2. South American freshwater needlefishes (Belonidae) of the genus Pseudotylosurus

    NARCIS (Netherlands)

    Collete, B.B.

    1974-01-01

    Pseudotylosurus Fernández Yépez is considered a valid genus of Belonidae based on the following combination of characters: depressed caudal peduncle; long narrow side branches to lateral line; pleural ribs attached to fourth vertebra; nasal papilla spatulate; lower pharyngeal plate and upper

  3. Juvenile colonies of the genus Pyrostremma Garstang, 1929 (Tunicata, Thaliacea)

    NARCIS (Netherlands)

    Soest, van R.W.M.

    1974-01-01

    Four remarkable dome-shaped, apparently juvenile colonies, belonging to the genus Pyrostremma Garstang, 1929, are described from the Bermuda area. Comparison with juvenile colonies of P.agassizi (Ritter & Byxbee, 1905), and with larger colonies, fragments and loose zooids of P.agassizi and

  4. New chromosome numbers in the genus Trigonella L. (Fabaceae ...

    African Journals Online (AJOL)

    Jane

    10 Jan 2011 ... b: Subgenus Trifoliastrum: Calyx campanulate and pod inflated. c: Subgenus Foenum-graecum: Calyx tubular and pod not inflated. Several investigators have attempted to employ the taxonomy of the genus Trigonella; Sirjaev (1935) has given in Latin an elaborate and systematic account of its taxonomy.

  5. Distribution, diversity and conservation of the genus Aloe in Kenya ...

    African Journals Online (AJOL)

    The genus Aloe is common in Kenya, with about 60 taxa recognised. Observations from this study indicate that most of the taxa have a restricted distribution, with only Aloe secundiflora var. secundiflora being widespread in the country. The diversity patterns indicate a high concentration of taxa in three areas that are ...

  6. Polystomatidae (Monogenea) parasitic in the anuran genus Kassina ...

    African Journals Online (AJOL)

    An investigation into the parasite loads of several anuran species in the central and eastern parts of the Orange Free State led to the discovery of another new South African species of Polystoma, harboured in running frogs of the genus Kassina which has not previously been known as a host of adult polystomes. Detailed ...

  7. Biosystematics of the Malagasy frogs. II. The genus Boophis (Rhacophoridae)

    NARCIS (Netherlands)

    Blommers-Schlösser, R.M.A.

    1979-01-01

    This paper concerns the genus Boophis Tschudi, 1938 ( = Malagasy Rhacophorus Kuhl & Van Hasselt, 1822). Apart from a reconsidering of adult morphology, certain new taxonomic characters, such as the colouration in life, the morphology of the tadpole and some mating calls, are presented. Karyotypes

  8. Recursions for characteristic numbers of genus one plane curves

    OpenAIRE

    Vakil, Ravi

    2001-01-01

    Characteristic numbers of families of maps of nodal curves to P2 are defined as intersection of natural divisor classes. (This definition agrees with the usual definition for families of plane curves.) Simple recursions for characteristic numbers of genus one plane curves of all degrees are computed.

  9. Bioactive Secondary Metabolites from the Marine Sponge Genus Agelas

    OpenAIRE

    Zhang, Huawei; Dong, Menglian; Chen, Jianwei; Wang, Hong; Tenney, Karen; Crews, Phillip

    2017-01-01

    The marine sponge genus Agelas comprises a rich reservoir of species and natural products with diverse chemical structures and biological properties with potential application in new drug development. This review for the first time summarized secondary metabolites from Agelas sponges discovered in the past 47 years together with their bioactive effects.

  10. Systematics and evolution in the West Indian iguanid genus Cyclura

    NARCIS (Netherlands)

    Schwartz, Albert; Carey, Michael

    1977-01-01

    Throughout the Greater Antilles, the Virgin Islands, the Cayman Islands, the Bahama Islands, and the Turks and Caicos islands occurs a group of moderate to very large lizards of the iguanid genus Cyclura. These ground iguanas form a conspicuous element of the herpetofaunas of their respective

  11. Polystomatidae (Monogenea) parasitic in the anuran genus Kassina ...

    African Journals Online (AJOL)

    Combes & Channing (1978-79) expressed the opinion that the discontinuity between the range of Polystoma natalensis, described by them from Natal in South Africa, and those of other African species of the genus, was probably due to a lack of documentation. An investigation into the parasite loads of several anuran ...

  12. Revision of the Genus Hybosorus Macleay (Coleoptera: Scarabaeidae, Hybosorinae)

    NARCIS (Netherlands)

    Kuijten, P.J.

    1983-01-01

    A taxonomic revision of the scarabaeoid genus Hybosorus is given, including descriptions, nomenclatorial notes, figures of genital apparatus and other relevant parts, a key, and notes on distribution and bionomics. Lectotypes are designated for Hybosorus carolinus LeConte, H. crassus Klug, H.

  13. A revision of the genus Sinularia May (Octocorallia, Alcyonacea)

    NARCIS (Netherlands)

    Verseveldt, J.

    1980-01-01

    In this revision of the genus Sinularia 93 valid species are recorded. The type specimens of 13 species could not be examined, since the depository of the specimens is unknown; nevertheless it is possible to make notes on seven of them in this paper; three were discussed in former papers (S. gyrosa,

  14. Phylogenetic diversity and position of the genus Campylobacter

    Science.gov (United States)

    Lau, P. P.; DeBrunner-Vossbrinck, B.; Dunn, B.; Miotto, K.; MacDonnell, M. T.; Rollins, D. M.; Pillidge, C. J.; Hespell, R. B.; Colwell, R. R.; Sogin, M. L.; hide

    1987-01-01

    RNA sequence analysis has been used to examine the phylogenetic position and structure of the genus Campylobacter. A complete 5S rRNA sequence was determined for two strains of Campylobacter jejuni and extensive partial sequences of the 16S rRNA were obtained for several strains of C. jejuni and Wolinella succinogenes. In addition limited partial sequence data were obtained from the 16S rRNAs of isolates of C. coli, C. laridis, C. fetus, C. fecalis, and C. pyloridis. It was found that W. succinogenes is specifically related to, but not included, in the genus Campylobacter as presently constituted. Within the genus significant diversity was noted. C. jejuni, C. coli and C. laridis are very closely related but the other species are distinctly different from one another. C. pyloridis is without question the most divergent of the Campylobacter isolates examined here and is sufficiently distinct to warrant inclusion in a separate genus. In terms of overall position in bacterial phylogeny, the Campylobacter/Wolinella cluster represents a deep branching most probably located within an expanded version of the Division containing the purple photosynthetic bacteria and their relatives. The Campylobacter/Wolinella cluster is not specifically includable in either the alpha, beta or gamma subdivisions of the purple bacteria.

  15. Reality conditions of loop solitons genus $g$: hyperelliptic am functions

    Directory of Open Access Journals (Sweden)

    Shigeki Matsutani

    2007-06-01

    Full Text Available This article is devoted to an investigation of a reality condition of a hyperelliptic loop soliton of higher genus. In the investigation, we have a natural extension of Jacobi am-function for an elliptic curves to that for a hyperelliptic curve. We also compute winding numbers of loop solitons.

  16. Phylogenetic relationships in the genus Aethomys (Rodentia: Muridae)

    African Journals Online (AJOL)

    These results are relatively concordant with recent molecular studies based on microcomplement fixation of albumin, mitochondrial DNA cytochrome b and 16S rRNA data, which collectively suggest that the genus Aethomys is paraphyletic. Possible paraphyly is also reflected by a relatively low bootstrap value at the node ...

  17. Ortholog prediction of the Aspergillus genus applicable for synthetic biology

    DEFF Research Database (Denmark)

    Rasmussen, Jane Lind Nybo; Vesth, Tammi Camilla; Theobald, Sebastian

    production. In this project, we compare the genomes of +300 species from the Aspergillus genus to generate a high-resolution pan-genomic map, representing genetic diversity spanning ~200 million years. We are identifying genes specific to species and clades to allow for guilt-by-association-based mapping...

  18. Phytochemical and Ethno-Pharmacological Review of the Genus ...

    African Journals Online (AJOL)

    Biflavanoid, diterpene, phenyl propanoid and lignans are abundant in the genus. The most common pharmacological activity of Araucaria in modern medicines is anti-inflammatory. It also possesses other pharmacological activities such as antiulcer, antiviral, neuro-protective, anti-depressant and anti-coagulant. The aim of ...

  19. New genus of diminutive microhylid frogs from Papua New Guinea

    Directory of Open Access Journals (Sweden)

    Fred Kraus

    2010-06-01

    Full Text Available A new genus of diminutive (10.1-11.3 mm microhylid frogs is described from New Guinea that is unique in its combination ofonly seven presacral vertebrae, a reduced phalangeal formula that leaves the first fingers and first toes as vestigial nubs, and reduction of the prepollex and prehallux to single elements. Relationships to other genera are unknown, but overall similarity suggests some relationship to Cophixalus, although that genus also differs in some muscle characters and likely remains paraphyletic. The new genus contains two species, which are among the smallest known frogs in the world. Their miniaturization may be related to their inhabiting leaf litter, exploitation of which may for small size. The new genus is currently known only from one mountaintop in the southeasternmost portion of New Guinea and another on a nearby island. This region is part of the East Papuan Composite Terrane and, should this lineage prove endemic to that region, it may suggest that it originated prior to that geological unit’s docking with mainland New Guinea at 23–29 MY.

  20. INTRODUCTION The tailor or weaver ants of genus Oecophylla ...

    African Journals Online (AJOL)

    INTRODUCTION. The tailor or weaver ants of genus Oecophylla. (Hymenoptera: Formicidae) are eusocial insects. They are obligately arboreal and are known for their unique nest building behaviour where workers construct nests by weaving together leaves using larval silk. Colonies can be extremely large with a mature ...

  1. Sirdavidia, an extraordinary new genus of Annonaceae from Gabon.

    Science.gov (United States)

    Couvreur, Thomas L P; Niangadouma, Raoul; Sonké, Bonaventure; Sauquet, Hervé

    2015-01-01

    A distinctive new monotypic genus from Gabon is described in the tropical plant family Annonaceae: Sirdavidia, in honor to Sir David Attenborough. Molecular phylogenetic analyses confirm that Sirdavidia, which is very distinct from a morphological standpoint, is not nested in any existing genus of Annonaceae and belongs to tribe Piptostigmateae (subfamily Malmeoideae), which now contains a total of six genera. The genus is characterized by long acuminate leaves, fully reflexed red petals, 16-19 bright yellow, loosely arranged stamens forming a cone, and a single carpel topped by a conspicuous stigma. With just three known collections, a preliminary IUCN conservation status assessment is provided as "endangered" as well as a distribution map. The discovery of Sirdavidia is remarkable at several levels. First, it was collected near the road in one of the botanically best-known regions of Gabon: Monts de Cristal National Park. Second, its sister group is the genus Mwasumbia, also monotypic, endemic to a small area in a forest in Tanzania, some 3000 km away. Finally, the floral morphology is highly suggestive of a buzz pollination syndrome. If confirmed, this would be the first documentation of such a pollination syndrome in Magnoliidae and early-diverging angiosperms in general.

  2. The genus Sphacelaria Lyngbye (Phaeophyceae) in the Netherlands

    NARCIS (Netherlands)

    Haas-Niekerk, de T.

    1966-01-01

    The species of the genus Sphacelaria Lyngb. that occur in the Netherlands have been investigated. These species are: S. plumigera Holmes, S. radicans (Dillw.) Ag., S. fusca (Huds.) Ag. It is suggested that S. furcigera and S. saxatilis should be regarded as synonyms of S. fusca. It was found that S.

  3. Identification of mip-like genes in the genus Legionella

    DEFF Research Database (Denmark)

    Cianciotto, N P; Bangsborg, Jette Marie; Eisenstein, B I

    1990-01-01

    with specific Mip antisera. Moreover, the cloned mip analog from Legionella micdadei encoded the cross-reactive protein. Thus, mip is conserved and specific to L. pneumophila, but mip-like genes are present throughout the genus, perhaps potentiating the intracellular infectivity of all Legionella species....

  4. The genus Capparis (Capparaceae) from the Indus to the Pacific

    NARCIS (Netherlands)

    Jacobs, M.

    1964-01-01

    This is a taxonomic revision of the genus Capparis in South and Southeast Asia, Malesia, Australia, and the Pacific. In this area, four sections are distinguished: 1. sect. Capparis, monotypic with C. spinosa, 2. sect. Sodada, monotypic with C. decidua, 3. sect. Monostichocalyx in a new

  5. Phylogenetic analysis of the genus Hordeum using repetitive DNA sequences

    DEFF Research Database (Denmark)

    Svitashev, S.; Bryngelsson, T.; Vershinin, A.

    1994-01-01

    A set of six cloned barley (Hordeum vulgare) repetitive DNA sequences was used for the analysis of phylogenetic relationships among 31 species (46 taxa) of the genus Hordeum, using molecular hybridization techniques. In situ hybridization experiments showed dispersed organization of the sequences...

  6. Formulae for Arithmetic on Genus 2 Hyperelliptic Curves

    DEFF Research Database (Denmark)

    Lange, Tanja

    2005-01-01

    treat odd and even characteristic separately. We present 3 different coordinate systems which are suitable for different environments, e.g. on a smart card we should avoid inversions while in software a limited number is acceptable. The presented formulae render genus two hyperelliptic curves very...

  7. Substrates specialization in lipid compounds and hydrocarbons of Marinobacter genus

    NARCIS (Netherlands)

    Bonin, P.; Vieira, C.; Grimaud, R.; Militon, C.; Cuny, P.; Lima, O.; Guasco, S.; Brussaard, C.P.D.; Michotey, V.

    2015-01-01

    The impact of petroleum contamination and of burrowing macrofauna on abundances of Marinobacter and denitrifiers was tested in marine sediment mesocoms after 3 months incubation. Quantification of this genus by qPCR with a new primer set showed that the main factor favoring Marinobacter abundance

  8. The oribatid mite genus Benoibates (Acari, Oribatida, Oripodidae).

    Science.gov (United States)

    Ermilov, Sergey G; Alvarado-Rodríguez, Olman; Kontschán, Jenő; Retana-Salazar, Axel P

    2014-01-01

    Two species of oribatid mites of the genus Benoibates (Oribatida, Oripodidae), i.e., Benoibatesbolivianus Balogh & Mahunka, 1969(a) and Benoibatesminimus Mahunka, 1985, are recorded for the first time in Costa Rica. Both are redescribed in details, using drawings, images and SEM micrographs, on the basis of Costa Rican specimens. An identification key to the known species of Benoibates is given.

  9. Pollen Ultrastructure of Genus Dendrobium Orchids as a Learning Resource

    Directory of Open Access Journals (Sweden)

    Lika Dwi Apriani

    2016-11-01

    Full Text Available Anggrek genus Dendrobium merupakan salah satu genus dari divisi spermatophyta yang merupakan kelompok tumbuhan yang berkembang dengan menggunakan biji. Tumbuhan berbiji tentu memiliki bunga sebagai alat perkembangan generatifnya. Perkembangan generatif pada bunga artinya pertemuan antara sel gamet jantan dan sel gamet betina. Sel gamet betina pada tumbuhan dihasilkan oleh putik, sedangkan sel gamet jantan disebut serbuk sari atau pollen. Genus Dendrobium merupakan salah satu kekayaan alam Indonesia, jumlahnya diperkirakan mencapai 275 spesies. Penelitian ini bertujuan untuk mengetahui bagaimana ultrastruktur pollen anggrek genus Dendrobium dari sepuluh spesies yang diamati menggunakan SEM. Jenis penelitian ini adalah deskriptif kualitatif. Hasil penelitian menunjukkan unit pollen untuk semua spesies yaitu kategori pollinia, sedangkan untuk polaritas pollen adalah apolar. Jenis aperture kesepuluh spesies yang diamati mempunyai aperture dengan pola yang tidak beraturan dan lebih dari enam yang disebut colpate. Bentuk pollen dari semua spesies yang diteliti bentuknya adalah subprolate hingga prolate dan ukuran pollen termasuk dalam kategori minuta hingga media. Ornamentasi pollen atau skluptur pollen tidak teridentifikasi dikarenakan ukuran pollen yang terlalu kecil, permukaan pollen terlihat kurang jelas. Sumber belajar yang digunakan adalah atlas.

  10. Gondwanamyia, a new empidoid (Diptera genus of uncertain placement

    Directory of Open Access Journals (Sweden)

    Bradley J. Sinclair

    2016-10-01

    Full Text Available A new minute-size empidoid fly genus, Gondwanamyia gen. n. and two new species (G. chilensis Cumming & Saigusa, sp. n., G. zealandica Sinclair & Brooks, sp. n. are described, illustrated, and their distributions mapped. The family and subfamily assignments remain uncertain, but features of the female terminalia potentially suggest Trichopezinae (Brachystomatidae.

  11. Twists of genus three curves and their Jacobians

    NARCIS (Netherlands)

    Meagher, Stephen

    2008-01-01

    An algebraic curve is a curve defined over by polynomial equations with coefficients in a given field. This thesis treats problems which arise from genus three curves over finite fields. An important tool for treating such curves is the Jacobian variety of the curve. One problem is how many points

  12. Controlling bean pod mottle virus (BPMV) (Genus Comovirus of ...

    African Journals Online (AJOL)

    Controlling bean pod mottle virus (BPMV) (Genus Comovirus of soybean with spatial arrangement of maize-soybean in southeastern Nigeria. ... plant produced the lowest grain yield.of 0..82 t / ha. Keywords: Spatial arrangement, Bean leaf beetle, Bean pod Mottl virus, Maize, Soybean. Agro-Science Vol. 3 (2) 2006: pp.

  13. A genus six cyclic tetragonal reduction of the Benney equations

    International Nuclear Information System (INIS)

    England, M; Gibbons, J

    2009-01-01

    A reduction of Benney's equations is constructed corresponding to Schwartz-Christoffel maps associated with a family of genus six cyclic tetragonal curves. The mapping function, a second kind Abelian integral on the associated Riemann surface, is constructed explicitly as a rational expression in derivatives of the Kleinian σ-function of the curve.

  14. PIXE analysis of trace elements in Genus Hippophae L

    International Nuclear Information System (INIS)

    Yin Zhongli; Jiang Xiangzhou; Ma Chengjun; Hao Jifang

    1993-01-01

    Trace elements in four kinds of the Genus Hippophae L pulps were analysed by PIXE. Optimization of the system performance was done by carefully selecting the absorbers. Analytical sensitivities of the PIXE system were obtained by means of 'external standard method'

  15. Resistance to Phytophthora cinnamomi in the Genus Abies

    Science.gov (United States)

    John Frampton; Fikret Isik; Mike Benson; Jaroslav Kobliha; Jan Stjskal

    2012-01-01

    A major limiting factor for the culture of true firs as Christmas trees is their susceptibility to Oomycete species belonging to the genus Phytophthora. In North Carolina alone, the Fraser fir (Abies fraseri [Pursh] Poir.) Christmas tree industry loses 6 to 7 million dollars annually to root rot primarily caused by ...

  16. Checklist of the fish parasitic genus Cichlidogyrus (Monogenea ...

    African Journals Online (AJOL)

    Current knowledge of the 85 species in the genus Cichlidogyrus, collected worldwide, including their hosts, localities and authors, is summarised in a table. Although these parasites occur mainly in Africa, representatives have been recorded on cichlids in Mexico. Their distribution and host specificity are commented on.

  17. Genus Zero Graph Segmentation: Estimation of Intracranial Volume

    DEFF Research Database (Denmark)

    Jensen, Rasmus Ramsbøl; Thorup, Signe Strann; Paulsen, Rasmus Reinhold

    2013-01-01

    present a fully automatic 3D graph-based method for segmentation of the ICV in non-contrast CT scans. We reformulate the ICV segmentation problem as an optimal genus 0 segmentation problem in a volumetric graph. The graph is the result of a volumetric spherical subsample from the data connected using...

  18. Karyotype analyses of the species of the genus Jurinea Cass ...

    African Journals Online (AJOL)

    In this study, karyotype analyses of 13 species belonging to the genus Jurinea Cass. (Compositae) and grown naturally in Turkey were conducted. These taxa include Jurinea alpigena C. Koch, Jurinea ancyrensis Bornm., Jurinea aucherana DC., Jurinea cadmea Boiss., Jurinea cataonica Boiss. and Hausskn., Jurinea ...

  19. Hurleyella, a new genus of Nearctic Dolichopodidae (Diptera)

    Science.gov (United States)

    Justin Runyon; Harold Robinson

    2010-01-01

    The new micro-dolichopodid genus Hurleyella and two new species, H. cumberlandensis and H. brooksi are described from the Nearctic. Hurleyella resembles the subfamily Medeterinae in having the legs bare of major setae, a depressed posterior mesonotum, and concave dorsal postcranium, but the complex male genitalia is unlike the relatively simple structure of...

  20. Infection by larval cestodies of the genus paradilepis in cultured ...

    African Journals Online (AJOL)

    Helminth infection of cultured Oreochromis niloticus was observed in two farms in Abeokuta, Ogun State and Jos, Plateau State. The parasite was identified as the larva of a cestode of the genus Paradilepis. Eggs and larvae were found under the scales and strongly and deeply embedded in fish body. Larvae measured ...

  1. Comparative genomic analysis reveals ecological differentiation in the genus Carnobacterium

    DEFF Research Database (Denmark)

    Iskandar, Christelle F.; Borges, Frédéric; Taminiau, Bernard

    2017-01-01

    was used as a model genus to elucidate the genetic basis of these colonization differences. Analyses of 16S rRNA gene meta-barcoding data showed that C. maltaromaticum followed by C. divergens are the most prevalent species in foods derived from animals (meat, fish, dairy products), and in the gut...

  2. Oribatid mites of the genus Allonothrus (Acari: Oribatida: Crotonioidea)

    African Journals Online (AJOL)

    Summary data on oribatid mites of the genus Allonothrus (Trhypochthoniidae) of the Ethiopian region are presented. A new subspecies, Allonothrus schuilingi seychelli nov. subsp., is described from Seychelles. It is distinguished on the basis of the shape and length of the notogastral and ventral setae. An identification key ...

  3. Bean Pod Mottle Virus (BPMV) (Genus Comovirus ): A Limiting ...

    African Journals Online (AJOL)

    The reactions of twenty soybean varieties to infection with Bean Pod Mottle Virus (BPMV) (Genus Comovirus) disease were studied for 2 consecutive years in the Department of Crop Science University of Nigeria, Nsukka Farm (Latitude 060 25N; Longitude 070 24N; attitude 447.26 m above sea level). Factorial arrangement ...

  4. The Australian endemic woodwasp genus Austrocyrta Riek (Hymenoptera: Xiphydriidae)

    Science.gov (United States)

    J.T. Jennings; A.D. Austin; N.M. Schiff

    2009-01-01

    The Australian xiphydriid woodwasp genus, previously known only from a single species, A. australiensis Riek, is revised. A second distinctive species from Carnarvon National Park in southcentral Queensland, A. fasciculata Jennings & Austin, sp. nov., is described, and a key to separate the males of the two species is provided.

  5. Freshwater nematodes from South Africa. 4. The genus Monhystera ...

    African Journals Online (AJOL)

    Freshwater nematodes from South Africa. 4. The genus Monhystera Bastian, 1865. A.P. Joubert and J. Heyns. Department of Zoology. Rand Afrikaans University. During a survey of freshwater nematodes in South Africa, five species of Monhystera Bastian, 1865, were encountered. The five species, three of which are new to ...

  6. Phytochemical and Pharmacological Studies of the Genus Tacca : A ...

    African Journals Online (AJOL)

    Tacca is an important genus comprising of approximately 15 species of the medicinal plants (Taccaceae). The plants are used in traditional medicine to relieve pains of the body and stomach, as an antidote for food poisoning as well as for their analgesic, antipyretic and anti-inflammatory activities. Chemical studies have ...

  7. Quantum cohomology of moduli spaces of genus zero stable curves

    OpenAIRE

    Fontanari, Claudio

    2007-01-01

    We investigate the (small) quantum cohomology ring of the moduli spaces of stable n-pointed curves of genus 0. In particular, we determine an explicit presentation in the case n=5 and we outline a computational approach to the case n=6.

  8. Surinam Dragon-Flies of the Genus Progomphus

    NARCIS (Netherlands)

    Belle, J.

    1966-01-01

    Up to the present time our knowledge of the genus Progomphus in Surinam has been restricted to that of the three species described by JAMES G. NEEDHAM (Trans. Amer. Ent. Soc. 69, p. 208—214, pl. 15 fig. 13—15). The three species were represented in the Progomphus material which NEEDHAM acquired from

  9. Taxonomic review of the Afrotropical genus Hypselogenia Burmeister (Coleoptera: Cetoniidae)

    NARCIS (Netherlands)

    Krikken, J.

    1979-01-01

    The Afrotropical genus Hypselogenia Burmeister is diagnosed and discussed. The characters of the species and varieties are examined, and presented in a synoptic table and in an analytical key. An annotated checklist of the species and varieties is given. The Leiden collection is fully recorded. Four

  10. A Systematic Review of the Hispaniolan Snake Genus Hypsirhynchus

    NARCIS (Netherlands)

    Schwartz, Albert

    1971-01-01

    One of the least known of the endemic Hispaniolan colubrid snake genera is Hypsirhynchus. The genus was proposed by GUNTHER (1858) for one specimen of a new snake, purportedly from the island of Barbados, to which he gave the name H. ferox. COPE (1862) later described H. scalaris from Hispaniola

  11. New species of the stingless bee genus Schwarziana (Hymenoptera, Apidae

    Directory of Open Access Journals (Sweden)

    Gabriel A.R. Melo

    2015-12-01

    Full Text Available ABSTRACT Two new species of the stingless bee genus Schwarziana from Brazil are described and illustrated. Schwarziana bocainensis sp. nov. is described from Serra da Bocaina, in São Paulo, and S. chapadensis sp. nov. is described from Chapada dos Veadeiros, in Goiás. An identification key to workers of the known species of Schwarziana is provided.

  12. Quantitative variation for apomictic reproduction in the genus Boechera (Brassicaceae)

    NARCIS (Netherlands)

    Aliyu, O.M.; Schranz, M.E.; Sharbel, T.F.

    2010-01-01

    • Premise of the study: The evolution of asexual seed production (apomixis) from sexual relatives is a great enigma of plant biology. The genus Boechera is ideal for studying apomixis because of its close relation to Arabidopsis and the occurrence of sexual and apomictic species at low ploidy levels

  13. Screening genus Penicillium for producers of cellulolytic and xylanolytic enzymes

    DEFF Research Database (Denmark)

    Krogh, Kristian Bertel Rømer; Mørkeberg, Astrid; Frisvad, Jens Christian

    2004-01-01

    genus Penicillium and compared with that of T. reesei. Either Solka-Floc cellulose or oat spelt xylan was used as carbon source in shake flask cultivations. All the fungi investigated showed coinduction of cellulolytic and xylanolytic enzymes during growth on cellulose as well as on xylan. The highest...

  14. The taxonomic status of giant sengis ( genus Rhynchocyon ) in ...

    African Journals Online (AJOL)

    The sengis (elephant-shrews) of Mozambique are poorly known, especially the taxonomic status of the giant sengis, genus Rhynchocyon. Currently, Rhynchocyon from Mozambique are thought to be chequered sengis, R. cirnei with specimens from the central coastal areas being placed in the subspecies R. c. cirnei, while ...

  15. Recombination among multiple mitochondrial pseudogenes from a passerine genus

    DEFF Research Database (Denmark)

    Nielsen, Kirstine Klitgaard; Arctander, P.

    2001-01-01

    PCR products of a fragment of the mitchondrial protein coding subunit 5 of NADH-dehydrogenase (ND5) from eight individuals representing five species of the South American bird genus Conirostrum were cloned. The 130 clones, which were subsequently sequenced, constituted 55 different sequences. Due...

  16. Ruwenzoria, a new genus of the Xylariaceae from Central Africa

    DEFF Research Database (Denmark)

    Stadler, M.; Læssøe, Thomas; Fournier, J.

    2010-01-01

    Abstract During a foray to the mountain rainforests of the Democratic Republic of the Congo, a peculiar species of Xylariaceae was found, which could not be accommodated in any of the existing genera. It is recognised as representative of a new genus, named Ruwenzoria, owing to the presence of a ...

  17. Cross-genus amplification and characterisation of microsatellite loci ...

    African Journals Online (AJOL)

    There was no evidence of linkage disequilibrium among pairs of loci, or of deviation from Hardy-Weinberg equilibrium. These six loci were informative in studies of population genetic structure of C. pumilus sensu lato. Keywords: Bats, Chaerephon pumilus, Chiroptera, microsatellites, Molossidae, cross-genus amplification

  18. New species of the stingless bee genus Schwarziana (Hymenoptera, Apidae)

    OpenAIRE

    Melo, Gabriel A.R.

    2015-01-01

    ABSTRACT Two new species of the stingless bee genus Schwarziana from Brazil are described and illustrated. Schwarziana bocainensis sp. nov. is described from Serra da Bocaina, in São Paulo, and S. chapadensis sp. nov. is described from Chapada dos Veadeiros, in Goiás. An identification key to workers of the known species of Schwarziana is provided.

  19. Studies in the family Thelypteridaceae X. The genus Coryphopteris

    NARCIS (Netherlands)

    Holttum, R.E.

    1976-01-01

    All known species of this genus are described, with synonymy for each and a key for identification. Seventeen new species are described: C. andersonii, C. andreae, C. arthrotricha, C. atjehensis, C. athyrioides, C. borealis, C. brevipilosa, C. hubrechtensis, C. iwatsukii, C. kolombangarae, C.

  20. Phylogenetic relationships in genus Gloriosa L. | Maroyi | African ...

    African Journals Online (AJOL)

    In an attempt to test the monophyly of the genus Gloriosa L., the chloroplast region trnL-trnF sequences were employed using Baeometra uniflora, Hexacyrtis dickiana, Neodregea glassii, Onixotis punctata, Onixotis stricta, Ornithoglossum parviflorum, Ornithoglossum undulatum, Ornithoglossum viride, Ornithoglossum ...

  1. A monograph of the fern genus Bolbitis (Lomariopsidaceae)

    NARCIS (Netherlands)

    Hennipman, E.

    1977-01-01

    The present study deals with systematic and taxonomic problems in the acrostichoid fern genus Bolbitis (Lomariopsidaceae). The idea came from Prof. Holttum, Kew, in view of his intended revision of the lomariopsidoid ferns for Flora Malesiana. Originally the study was confined to the Asian

  2. On the species of the Phalanger-genus Pseudochirus

    NARCIS (Netherlands)

    Jentink, F.A.

    1884-01-01

    Pseudochirus is a well-defined genus of Phalangers, which, up to this time, embraced three species: cookii, bernsteinii and albertisii. Pseudochirus viverrinus Ogilby (1837), from Van Diemen’s Land, is regarded as specifically distinct from Ps. cookii Desmarest (1817), from the Australian Continent.

  3. Taxonomic studies in the genus Disperis (Orchidaceae) in Southeast Asia

    NARCIS (Netherlands)

    Kurzweil, H.

    2005-01-01

    The taxonomy of the Asian species of the genus Disperis (Orchidaceae) was examined. Following study of material from throughout the distribution range all previously recognised Asian taxa were considered synonymous, and therefore only one widespread species D. neilgherrensis Wight is recognised.

  4. Ecua, a new genus op Apocynaceae from Malesia

    NARCIS (Netherlands)

    Middleton, David J.

    1996-01-01

    Whilst examining the specimens of Apocynaceae in Herbarium Bogoriense I came upon two unknown specimens which appeared to be species of Parsonsia. On further examination they turned out to belong to a new genus related to Parsonsia but differing from it in the stamens which are included within the

  5. Vitilevumyia, an enigmatic new genus of Stratiomyidae from Fiji (Diptera)

    Science.gov (United States)

    A new genus of Stratiomyidae, Vitilevumyia gen. nov. (type species, V. bobwoodleyi, sp. nov.) is described from the island of Viti Levu, Fiji. It exhibits an unusual combination of character states, but is tentatively placed in the tribe Prosopochrysini of the subfamily Stratiomyinae. ...

  6. Ethnobotany, chemistry, and biological activities of the genus Tithonia (Asteraceae).

    Science.gov (United States)

    Chagas-Paula, Daniela A; Oliveira, Rejane B; Rocha, Bruno A; Da Costa, Fernando B

    2012-02-01

    The genus Tithonia is an important source of diverse natural products, particularly sesquiterpene lactones, diterpenes, and flavonoids. The collected information in this review attempts to summarize the recent developments in the ethnobotany, biological activities, and secondary metabolite chemistry of this genus. More than 100 structures of natural products from Tithonia are reported in this review. The species that has been most investigated in this genus is T. diversifolia, from which ca. 150 compounds were isolated. Biological studies are described to evaluate the anti-inflammatory, analgesic, antimalarial, antiviral, antidiabetic, antidiarrhoeal, antimicrobial, antispasmodic, vasorelaxant, cancer-chemopreventive, cytotoxic, toxicological, bioinsecticide, and repellent activities. A few of these studies have been carried out with isolated compounds from Tithonia species, but the majority has been conducted with different extracts. The relationship between the biological activity and the toxicity of compounds isolated from the plants of this genus as well as T. diversifolia extracts still remains unclear, and mechanisms of action remain to be determined. Copyright © 2012 Verlag Helvetica Chimica Acta AG, Zürich.

  7. Pyrrolizidine alkaloids from Bulgarian species of the genus Senecio

    Directory of Open Access Journals (Sweden)

    NADEZHDA KOSTOVA

    2006-12-01

    Full Text Available Nine Bulgarian species from the genus Senecio were studied phytochemically and/or by GC-MS analysis. Senecivernine-N-oxide was isolated and identified by spectral data for the first time. Different types of pyrrolizidine alkaloids were tested for cytotoxicity on murine lymphocytes. At a concentration of 100 µg/ml, the alkaloid retroisosenine showed immunosuppressive effect.

  8. Species and genetic diversity in the genus Drosophila inhabiting the ...

    Indian Academy of Sciences (India)

    addition, it is neither a pest nor a vector. D. melanogaster is the most extensively used species in the genus. ..... inhabiting different localities in north. The south experiences a tropical and humid climate. ... icant changes in the frequency of inversion heterozygotes in natural populations from Nilgiri range in south India. They.

  9. Studies on the genus Atriplex L. (Amaranthaceae) in Italy. IV ...

    African Journals Online (AJOL)

    Studies on the genus Atriplex L. (Amaranthaceae) in Italy. IV. Atriplex bocconei Guss. – Atriplex bocconei Guss. is here typified on one herbarium specimen kept in NAP. The identity of the species is also clarified on the basis of literature analysis and examination of type material and other specimens that allowed to include it ...

  10. Stemodia L. (Scrophulariaceae, a Newly Naturalized Genus in Taiwan

    Directory of Open Access Journals (Sweden)

    Yi-Shou Liang

    2011-03-01

    Full Text Available Stemodia verticillata (Mill. Hassl. (Scrophulariaceae was found in the lowlands of northern Taiwan. This represents a new naturalization not only for this species but also for the genus on this island. A taxonomic account of S. verticillata is treated in this study. A line-drawing, distribution map and photographs of this species are also provided to aid in identification.

  11. Revision of the genus Diaphorocera Heyden, 1863 (Coleoptera, Meloidae, Cerocomini)

    NARCIS (Netherlands)

    Turco, F.; Bologna, M.A.

    2007-01-01

    Diaphorocera, a Saharo-Sindian genus belonging to the tribe Cerocomini, is revised and a new synonymy is proposed. A cladistic classification is proposed as well, on a set of adult morphological characters. The available bionomical records, both original and from literature, concerning phenology,

  12. The Genus Theba (Mollusca: Gastropoda: Helicidae), Systematics and Distribution

    NARCIS (Netherlands)

    Gittenberger, E.; Ripken, Th. E.J.

    1987-01-01

    Our knowledge concerning taxonomy and zoogeography of the fossil and recent species of the helicid genus Theba is summarized and enlarged. The fossil T. arinagae spec. nov. is described from Gran Canaria. The recent T. andalusica spec. nov. and T. sacchii spec. nov. are described from the

  13. Nomenclatural realignment of Neotyphodium species with genus Epicholë.

    Science.gov (United States)

    Leuchtmann, Adrian; Bacon, Charles W; Schardl, Christopher L; White, James F; Tadych, Mariusz

    2014-01-01

    Nomenclatural rule changes in the International Code of Nomenclature for algae, fungi and plants, adopted at the 18th International Botanical Congress in Melbourne, Australia, in 2011, provide for a single name to be used for each fungal species. The anamorphs of Epichloë species have been classified in genus Neotyphodium, the form genus that also includes most asexual Epichloë descendants. A nomenclatural realignment of this monophyletic group into one genus would enhance a broader understanding of the relationships and common features of these grass endophytes. Based on the principle of priority of publication we propose to classify all members of this clade in the genus Epichloë. We have reexamined classification of several described Epichloë and Neotyphodium species and varieties and propose new combinations and states. In this treatment we have accepted 43 unique taxa in Epichloë, including distinct species, subspecies, and varieties. We exclude from Epichloë the two taxa Neotyphodium starrii, as nomen dubium, and Neotyphodium chilense, as an unrelated taxon.

  14. First report of the genus Retortamonas (Sarcomastigophora: Retortamonadidae in birds

    Directory of Open Access Journals (Sweden)

    Rafael A Martínez-Díaz

    2001-10-01

    Full Text Available In studies carried out on the parasites infecting ostriches (Struthio camelus in Spain, trophozoites of Retortamonas sp. have been found in the intestinal contents of 28 out of 146 slaughtered ostriches. The species infecting ostriches could not be determined from the morphological data available. However, these findings are important as they constitute the first report of the genus Retortamonas in birds.

  15. The tantulocarid genus Arcticotantalus removed from Basipodellidae into Deoterthridae (Crustacea

    DEFF Research Database (Denmark)

    Knudsen, Steen Wilhelm; Kirkegaard, Maja; Olesen, JØrgen

    2009-01-01

    is tentatively placed in Deoterthridae based on the mode of formation of the male trunk sac, the pattern of ornamentation on the tergites and cephalic shield, and the number of setae on the thoracopods and caudal rami. It is suggested that the genus Arcticotantulus Kornev, Tchesunov & Rybnikov, 2004 is removed...

  16. A new genus of Staphylinidae (Coleoptera) from the Lower Cretaceous

    DEFF Research Database (Denmark)

    Schomann, Andrea Maria; Solodovnikov, Alexey

    2012-01-01

    The fossil genus of rove beetles Apticaxgen.n. with two new species, A. volanssp.n. and A. solidussp.n., is described from the Nova Olinda Member of the Crato Formation in north-eastern Brazil (Aptian–Albian, dated as 125–99.6 Ma old). Both species belong to the clade Staphylininae + Paederinae i...

  17. Aglaothecium Groenh., a new lichen genus from Malaysia

    NARCIS (Netherlands)

    Groenhart, P.

    1962-01-01

    The new genus Aglaothecium Groenh. is proposed to accomodate the new species A. saxicola Groenh. The development of bitunicate asci as occurring in cryptothecioid genera is compared with that of the supposedly unitunicate but thick-walled asci which are common in Lecideaceae and Lecanoraceae. The

  18. The genus Rhododendron L. in Indochina and Siam

    NARCIS (Netherlands)

    Sleumer, H.

    1958-01-01

    In the course of my recent revision of the genus Rhododendron in Malaysia it has become evident, that the subsect. Irrorata, regarded as purely South Eastern Asiatic up to now, is also represented in the Malay Peninsula and Sumatra, whilst the subsect. Euvireya, outside of its large Malaysian area,

  19. Sesquiterpene lactones. XXXIV. Guaianolides in the genus Leuzea DC.

    Directory of Open Access Journals (Sweden)

    Gerard Nowak

    2014-01-01

    Full Text Available Guaianolides were found in three species of the genus Leuzea DC. Chlorojanerin, cynaropicrin and janerin were isolated from L. rhapontica subg. helenifolia (Gren, Gordon Holub and L. rhaponticoides Graells. From L. carthamoides (Willd. DC., chlorojanerin, cynaropicrin, janerin, cebellin E and repdiolide were obtained.

  20. Molecular signatures and phylogenomic analysis of the genus Burkholderia: proposal for division of this genus into the emended genus Burkholderia containing pathogenic organisms and a new genus Paraburkholderia gen. nov. harboring environmental species.

    Science.gov (United States)

    Sawana, Amandeep; Adeolu, Mobolaji; Gupta, Radhey S

    2014-01-01

    The genus Burkholderia contains large number of diverse species which include many clinically important organisms, phytopathogens, as well as environmental species. However, currently, there is a paucity of biochemical or molecular characteristics which can reliably distinguish different groups of Burkholderia species. We report here the results of detailed phylogenetic and comparative genomic analyses of 45 sequenced species of the genus Burkholderia. In phylogenetic trees based upon concatenated sequences for 21 conserved proteins as well as 16S rRNA gene sequence based trees, members of the genus Burkholderia grouped into two major clades. Within these main clades a number of smaller clades including those corresponding to the clinically important Burkholderia cepacia complex (BCC) and the Burkholderia pseudomallei groups were also clearly distinguished. Our comparative analysis of protein sequences from Burkholderia spp. has identified 42 highly specific molecular markers in the form of conserved sequence indels (CSIs) that are uniquely found in a number of well-defined groups of Burkholderia spp. Six of these CSIs are specific for a group of Burkholderia spp. (referred to as Clade I in this work) which contains all clinically relevant members of the genus (viz. the BCC and the B. pseudomallei group) as well as the phytopathogenic Burkholderia spp. The second main clade (Clade II), which is composed of environmental Burkholderia species, is also distinguished by 2 identified CSIs that are specific for this group. Additionally, our work has also identified multiple CSIs that serve to clearly demarcate a number of smaller groups of Burkholderia spp. including 3 CSIs that are specific for the B. cepacia complex, 4 CSIs that are uniquely found in the B. pseudomallei group, 5 CSIs that are specific for the phytopathogenic Burkholderia spp. and 22 other CSI that distinguish two groups within Clade II. The described molecular markers provide highly specific means for

  1. Medicinal uses, phytochemistry and pharmacology of the genus Dictamnus (Rutaceae).

    Science.gov (United States)

    Lv, Mengying; Xu, Ping; Tian, Yuan; Liang, Jingyu; Gao, Yiqiao; Xu, Fengguo; Zhang, Zunjian; Sun, Jianbo

    2015-08-02

    Seven species from the genus Dictamnus are distributed throughout Europe and North Asia and only two species grow in China. One is Dictamnus dasycarpus Turcz., which could be found in many areas of China and has been recorded in Chinese Pharmacopoeia. The other is Dictamnus angustifolius G. Don ex Sweet, which is only present in Xinjiang province and has been used as an alternative for Dictamnus dasycarpus in the local for the treatment of rheumatism, bleeding, itching, jaundice, chronic hepatitis and skin diseases. The present paper reviewed the traditional uses, phytochemistry, pharmacology and toxicology of the genus Dictamnus. Information on the Dictamnus species was collected from classic books about Chinese herbal medicine and globally accepted scientific databases including PubMed, Elsevier, ASC, Scopus, Google Scholar, Web of Science, CNKI and others. About 170 chemical compounds, which include quinoline alkaloids, limonoids, sesquiterpenes, coumarins, flavonoids and steroids, have been isolated from the genus Dictamnus. The characteristic and active constituents of Dictamnus species are considered to be quinoline alkaloids and limonoids, which exhibited a broad spectrum of biological activities such as anti-cancer, anti-inflammation, anti-microbe, anti-platelet-aggregation, vascular-relaxation, anti-insect, anti-HIV, anti-allergy and neuroprotection. Moreover, quinoline alkaloids and limonoids could be used as quality control markers to distinguish different species from the genus Dictamnus. However, there were also some reports on the toxic hepatitis and phototoxic effect of Dictamnus species, and the related research needs to be further studied. In this review, we summarized the chemical constituents, pharmacology, quality control and toxicology of the species from genus Dictamnus. Phytochemical investigations indicated that quinoline alkaloids and limonoids were the major bioactive components with potential cytotoxic, neuroprotective, anti

  2. The genus Psiadia: Review of traditional uses, phytochemistry and pharmacology.

    Science.gov (United States)

    Mahadeo, Keshika; Grondin, Isabelle; Kodja, Hippolyte; Soulange Govinden, Joyce; Jhaumeer Laulloo, Sabina; Frederich, Michel; Gauvin-Bialecki, Anne

    2018-01-10

    The genus Psiadia Jacq. ex. Willd. belongs to the Asteraceae family and includes more than 60 species. This genus grows in tropical and subtropical regions, being especially well represented in Madagascar and the Mascarene Islands (La Réunion, Mauritius and Rodrigues). Several Psiadia species have been used traditionally for their medicinal properties in Africa and the Mascarene Islands. Based on traditional knowledge, various phytochemical and pharmacological studies have been conducted. However there are no recent papers that provide an overview of the medicinal potential of Psiadia species. Therefore, the aim of this review is to provide a comprehensive summary of the botany, phytochemistry and pharmacology of Psiadia and to highlight the gaps in our knowledge for future research opportunities. The available information on traditional uses, phytochemistry and biological activities of the genus Psiadia was collected from scientific databases through a search using the keyword 'Psiadia' in 'Google Scholar', 'Pubmed', 'Sciencedirect', 'SpringerLink', 'Web of Science', 'Wiley' and 'Scifinder'. Additionally, published books and unpublished Ph.D. and MSc. dissertations were consulted for botanical information and chemical composition. Historically, species of the genus Psiadia have been used to treat a wide range of ailments including abdominal pains, colds, fevers, bronchitis, asthma, rheumatoid arthritis, skin infections and liver disorders among others. Phytochemical works led to the isolation of flavonoids, phenylpropanoids, coumarins and terpenoids. Furthermore, phytochemical compositions of the essential oils of some species have been evaluated. Crude extracts, essential oils and isolated molecules showed in vitro pharmacological activities, such as antimicrobial, anti-viral, anti-inflammatory, antiplasmodial and antileishmanial activities. Crude extracts of Psiadia dentata and Psiadia arguta have specifically been found to be potentially useful for inhibition

  3. Description of a new species of the genus Litus Haliday (Hymenoptera: Chalcidoidea: Mymaridae from India

    Directory of Open Access Journals (Sweden)

    Tabassum Rehmat

    2016-03-01

    Full Text Available A new species of the genus Litus Haliday (Chalcidoidea: Mymaridae, Litus assamensis sp. nov., is described from Assam, India.  A key to the Indian species of the genus is also given. 

  4. Neocampanella, a new corticioid fungal genus, and a note on Dendrothele bispora

    Science.gov (United States)

    Karen K. Nakasone; David S. Hibbett; Greta Goranova

    2009-01-01

    The new genus Neocampanella (Agaricales, Agaricomycetes, Basidiomycota) is established for Dentocorticium btastanos Boidin & Gilles, a crustose species, and the new combination, Neocampanella blastanos, is proposed. Morphological and molecular studies support the recognition of the new genus and its close...

  5. Revision of the genus 'Microbrotula' (Teleostei: Bythitidae), with description of two new species and a related new genus

    DEFF Research Database (Denmark)

    Schwarzhans, Werner; Nielsen, Jørgen

    2011-01-01

    Following recent systematic revisions of Anderson (2005, 2007), seven species of the viviparous genus Microbrotula (Teleostei: Bythitidae) have been described, all from the Indo-west Pacific Ocean. Six of these species are here recognised as valid: M. bentleyi, M. greenfieldi, M. punicea, M. quee...

  6. A Proposed Genus Boundary for the Prokaryotes Based on Genomic Insights

    OpenAIRE

    Qin, Qi-Long; Xie, Bin-Bin; Zhang, Xi-Ying; Chen, Xiu-Lan; Zhou, Bai-Cheng; Zhou, Jizhong; Oren, Aharon; Zhang, Yu-Zhong

    2014-01-01

    Genomic information has already been applied to prokaryotic species definition and classification. However, the contribution of the genome sequence to prokaryotic genus delimitation has been less studied. To gain insights into genus definition for the prokaryotes, we attempted to reveal the genus-level genomic differences in the current prokaryotic classification system and to delineate the boundary of a genus on the basis of genomic information. The average nucleotide sequence identity betwe...

  7. Revisiting species delimitation within the genus Oxystele using DNA barcoding approach

    OpenAIRE

    Van Der Bank,Herman; Herbert,D.G.; Greenfield,Richard; Yessoufou,Kowiyou

    2013-01-01

    Abstract The genus Oxystele, a member of the highly diverse marine gastropod superfamily Trochoidea, is endemic to southern Africa. Members of the genus include some of the most abundant molluscs on southern African shores and are important components of littoral biodiversity in rocky intertidal habitats. Species delimitation within the genus is still controversial, especially regarding the complex O. impervia / O. variegata. Here, we assessed species boundaries within the genus using DNA bar...

  8. Mitochondrial DNA-based genetic diversity of genus Lygus (Hemiptera: Miridae) in North America

    Science.gov (United States)

    The genus Lygus is widely distributed in North American and Eurasian continents. It is the most-studied genus in the family Miridae. However, very less information on the genetic diversity of this genus is available. Studying genetic variation among Lygus pest species and thereby constructing a ...

  9. Taxonomic revision of the afrotropical genus Megatrigon Johnson, 1898 (Diptera: Syrphidae)

    DEFF Research Database (Denmark)

    Doczkal, Dieter; Radenković, Snežana; Lyneborg, Leif

    2016-01-01

    The genus-group taxon Megatrigon Johnson, 1898, stat. nov., is revised and treated as a valid genus within the Merodontini (= Eumerini). Extensive diagnoses are given for the genus and for its three constituent species groups: argenteus group [11 spp.], nivalis group [monotypic], sexfasciatus group...

  10. Surimyia, a new genus of Microdontinae, with notes on Paragodon Thompson, 1969 (Diptera, Syrphidae)

    NARCIS (Netherlands)

    Reemer, M.

    2008-01-01

    Surimyia, a new genus of Microdontinae (Diptera: Syrphidae) is described, based on specimens from Suriname. Surimyia is the only known genus of Syrphidae in which the katatergum (ventral part of lateral postnotal sclerite of mesonotum) lacks microtrichia. Within Microdontinae, the genus is unique in

  11. Computational identification of strain-, species- and genus-specific proteins

    Directory of Open Access Journals (Sweden)

    Thiagarajan Rathi

    2005-11-01

    Full Text Available Abstract Background The identification of unique proteins at different taxonomic levels has both scientific and practical value. Strain-, species- and genus-specific proteins can provide insight into the criteria that define an organism and its relationship with close relatives. Such proteins can also serve as taxon-specific diagnostic targets. Description A pipeline using a combination of computational and manual analyses of BLAST results was developed to identify strain-, species-, and genus-specific proteins and to catalog the closest sequenced relative for each protein in a proteome. Proteins encoded by a given strain are preliminarily considered to be unique if BLAST, using a comprehensive protein database, fails to retrieve (with an e-value better than 0.001 any protein not encoded by the query strain, species or genus (for strain-, species- and genus-specific proteins respectively, or if BLAST, using the best hit as the query (reverse BLAST, does not retrieve the initial query protein. Results are manually inspected for homology if the initial query is retrieved in the reverse BLAST but is not the best hit. Sequences unlikely to retrieve homologs using the default BLOSUM62 matrix (usually short sequences are re-tested using the PAM30 matrix, thereby increasing the number of retrieved homologs and increasing the stringency of the search for unique proteins. The above protocol was used to examine several food- and water-borne pathogens. We find that the reverse BLAST step filters out about 22% of proteins with homologs that would otherwise be considered unique at the genus and species levels. Analysis of the annotations of unique proteins reveals that many are remnants of prophage proteins, or may be involved in virulence. The data generated from this study can be accessed and further evaluated from the CUPID (Core and Unique Protein Identification system web site (updated semi-annually at http://pir.georgetown.edu/cupid. Conclusion CUPID

  12. Medicinal uses, phytochemistry and pharmacology of the genus Uncaria.

    Science.gov (United States)

    Zhang, Qian; Zhao, Jiao Jiao; Xu, Jian; Feng, Feng; Qu, Wei

    2015-09-15

    The genus Uncaria belongs to the family Rubiaceae, which mainly distributed in tropical regions, such as Southeast Asia, Africa and Southeast America. Their leaves and hooks have long been thought to have healing powers and are already being tested as a treatment for asthma, cancer, cirrhosis, diabetes, hypertension, stroke and rheumatism. The present review aims to provide systematically reorganized information on the ethnopharmacology, phytochemistry and pharmacology of the genus Uncaria to support for further therapeutic potential of this genus. To better understanding this genus, information on the stereo-chemistry and structure-activity relationships in indole alkaloids is also represented. The literature study of this review is based on various databases search (SCIFinder, Science Direct, CNKI, Wiley online library, Spring Link, Web of Science, PubMed, Wanfang Data, Medalink, Google scholar, ACS, Tropicos, Council of Heads of Australasian Herbaria, The New York Botanical Garden, African Plants Database at Genera Botanical Garden, The Plant List and SEINet) and library search for Biological Abstract and some local books on ethnopharmacology. 19 species of the genus Uncaria are found to be important folk medicines in China, Malaysia, Phillippines, Africa and Southeast America, etc, and have been served for the treatment of asthma, rheumatism, hyperpyrexia, hypertension and headaches, etc. More than 200 compounds have been isolated from Uncaria, including indole alkaloids, triterpenes, flavonoids, phenols, phenylpropanoids, etc. As characteristic constituents, indole alkaloids have been considered as main efficacy component for hypertension, epilepsy, depressant, Parkinson's disease and Alzheimer's disease. In addition, pharmacokinetic and metabolism investigation reveal that the indole alkaloids are likely to be absorbed, metabolized and excreted at early time points. Moreover, the specific inhibition of CYP isozymes can regulate their hydroxylation metabolites

  13. A Universal Genus-Two Curve from Siegel Modular Forms

    Science.gov (United States)

    Malmendier, Andreas; Shaska, Tony

    2017-11-01

    Let p be any point in the moduli space of genus-two curves M_2 and K its field of moduli. We provide a universal equation of a genus-two curve C_{&alpha,; β} defined over K(α, β), corresponding to p, where α and β satisfy a quadratic α^2+ b β^2= c such that b and c are given in terms of ratios of Siegel modular forms. The curve C_{α, β} is defined over the field of moduli K if and only if the quadratic has a K-rational point (α, β). We discover some interesting symmetries of the Weierstrass equation of C_{α, β}. This extends previous work of Mestre and others.

  14. Use of the genus Artemia in ecotoxicity testing

    Energy Technology Data Exchange (ETDEWEB)

    Nunes, Bruno S. [Instituto de Ciencias Biomedicas de Abel Salazar, Departamento de Estudos de Populacoes, Laboratorio de Ecotoxicologia, Universidade do Porto, Largo Prof. Abel Salazar 2, 4099-003 Porto (Portugal) and Centro Interdisciplinar de Investigacao Marinha e Ambiental, Rua dos Bragas 289, 4150-123 Porto (Portugal)]. E-mail: bruno@ufp.pt; Carvalho, Felix D. [REQUIMTE, Departamento de Toxicologia da Faculdade de Farmacia da Universidade do Porto, Rua Anibal Cunha, 164, 4050-047 Porto (Portugal); Guilhermino, Lucia M. [Instituto de Ciencias Biomedicas de Abel Salazar, Departamento de Estudos de Populacoes, Laboratorio de Ecotoxicologia, Universidade do Porto, Largo Prof. Abel Salazar 2, 4099-003 Porto (Portugal); Centro Interdisciplinar de Investigacao Marinha e Ambiental, Rua dos Bragas 289, 4150-123 Porto (Portugal); Van Stappen, Gilbert [Laboratory of Aquaculture and Artemia Reference Centre, Ghent University, Rozier 44, B-9000 Ghent (Belgium)

    2006-11-15

    Information related to varied uses of several species of the genus Artemia (commonly known as brine shrimp), is dispersed among literature from several scientific areas, such as Ecology, Physiology, Ecotoxicology, Aquaculture and Genetics. The present paper reviews information related to Artemia that may be considered relevant for ecotoxicity testing. Integration of different areas of scientific knowledge concerning biology, life cycle and environmental needs of Artemia is of crucial importance when considering the interpretation of results drawn from tests involving this genus. Furthermore, this paper provides suggestions to overcome problems related to toxicity assessment with the use of Artemia as test organism in bioassays, under the scope of estuarine, marine and hypersaline environments. Aspects related to variability in results, adoptable toxicity end-points, culture conditions, characteristics of species and strains, influence of geographical origins over physiological features and responses to exposure to chemical agents are considered. - The physiology, reproductive processes and general use of Artemia in modern ecotoxicological testing are reviewed.

  15. Genomic encyclopedia of type strains of the genus Bifidobacterium.

    Science.gov (United States)

    Milani, Christian; Lugli, Gabriele Andrea; Duranti, Sabrina; Turroni, Francesca; Bottacini, Francesca; Mangifesta, Marta; Sanchez, Borja; Viappiani, Alice; Mancabelli, Leonardo; Taminiau, Bernard; Delcenserie, Véronique; Barrangou, Rodolphe; Margolles, Abelardo; van Sinderen, Douwe; Ventura, Marco

    2014-10-01

    Bifidobacteria represent one of the dominant microbial groups that are present in the gut of various animals, being particularly prevalent during the suckling stage of life of humans and other mammals. However, the overall genome structure of this group of microorganisms remains largely unexplored. Here, we sequenced the genomes of 42 representative (sub)species across the Bifidobacterium genus and used this information to explore the overall genetic picture of this bacterial group. Furthermore, the genomic data described here were used to reconstruct the evolutionary development of the Bifidobacterium genus. This reconstruction suggests that its evolution was substantially influenced by genetic adaptations to obtain access to glycans, thereby representing a common and potent evolutionary force in shaping bifidobacterial genomes. Copyright © 2014, American Society for Microbiology. All Rights Reserved.

  16. What do we know by now about the genus Naegleria?

    Science.gov (United States)

    De Jonckheere, Johan F

    2014-11-01

    In this short overview of the genus Naegleria a brief historical sketch is given since the discovery of this amoeboflagellate in 1899 and the finding in 1970 that one species, Naegleria fowleri causes primary amoebic meningoencephalitis in man. Eight different types of this pathogen are known which have an uneven distribution over the world. Until now 47 different Naegleria spp. are described, of which two other species cause disease in experimental animals, and their geographical dispersal is indicated. The presence of group I introns in the SSU and in the LSU rDNA in the genus is discussed, as well as the possibility of sex or mating. It is also mentioned that the genome of N. fowleri should not be compared to that of Naegleria gruberi, to know why the former is pathogenic, but to the genome of its closest relative Naegleria lovaniensis. Copyright © 2014. Published by Elsevier Inc.

  17. Phylogenetic analysis of the genus Hordeum using repetitive DNA sequences

    DEFF Research Database (Denmark)

    Svitashev, S.; Bryngelsson, T.; Vershinin, A.

    1994-01-01

    over all chromosomes of H. vulgare and the wild barley species H. bulbosum, H. marinum and H. murinum. Southern blot hybridization revealed different levels of polymorphism among barley species and the RFLP data were used to generate a phylogenetic tree for the genus Hordeum. Our data are in a good...... agreement with the classification system which suggests the division of the genus into four major groups, containing the genomes I, X, Y, and H. However, our investigation also supports previous molecular studies of barley species where the unique position of H. bulbosum has been pointed out. In our...... experiments, H. bulbosum generally had hybridization patterns different from those of H. vulgare, although both carry the I genome. Based on our results we present a hypothesis concerning the possible origin and phylogeny of the polyploid barley species H. secalinum, H. depressum and the H. brachyantherum...

  18. Brachylophora, a new brachypterous genus of Rhopalophorini (Coleoptera, Cerambycidae

    Directory of Open Access Journals (Sweden)

    Robin O. S. Clarke

    2011-06-01

    Full Text Available Brachylophora, a new brachypterous genus of Rhopalophorini (Coleoptera, Cerambycidae. Brachylophora auricollis (Bruch, 1918 comb. nov. = Pasiphyle auricollis Bruch, 1918, originally described from Argentina (Salta, is redescribed and illustrated. Although with reduced elytra, the genus is transferred from Rhinotragini to Rhopalophorini based on the following characters: eyes well separated in both sexes, frons between eyes depressed and lacking frontal suture; pro-, meso-, and metasternum planar; mesothorax parallel-sided, not at all declivous before mesosternal process; metasternum large, together with mesosternum twice length of prosternum, metepisternum very wide, entire suture separating it from metasternum clearly visible when viewed from below; female ovipositor shortened with short cylindrical styles; and, more generally, structural features of hind legs, and surface ornamentation. Habitus similar to Coremia group. Bolivian specimens were netted as they visited flowers of Croton sp. (Euphorbiaceae.

  19. Nutrient partitioning and seedling development in the genus Leucaena

    International Nuclear Information System (INIS)

    Dovel, R.L.

    1987-01-01

    Slow establishment of the genus Leucaena from seed has been attributed to law seedling vigor and late nodulation. Observation of early seedling growth indicated that partitioning of a large proportion of resources to the root of young Leucaena seedlings could account, in part, for the slow initial shoot growth observed in this genus. Therefore, a series of experiments were conducted to examine the partitioning of stored seed reserves, photosynthate, and nitrogen in developing Leucaena seedlings. The effects of nodulation and nitrogen fertilization on partitioning of nutrients in the seedling were also examined. Seed reserves were initially used for radicle growth in dark grown seedlings; however, partitioning soon shifted to the hypocotyl. By four days after imbibition, hypocotyl weight exceeded radicle weight in both species tested (L. leucocephala and L. retusa), at all temperatures above 20 0 C. Two experiments were conducted examining the carbon partitioning of L. leucocephala cultivar K-8 using 14 CO 2 pulse labeling techniques

  20. Landau-Ginzburg orbifolds, mirror symmetry and the elliptic genus

    International Nuclear Information System (INIS)

    Berglund, P.; Henningson, M.

    1995-01-01

    We compute the elliptic genus for arbitrary two-dimensional N=2 Landau-Ginzburg orbifolds. This is used to search for possible mirror pairs of such models. We show that if two Landau-Ginzburg models are conjugate to each other in a certain sense, then to every orbifold of the first theory corresponds an orbifold of the second theory with the same elliptic genus (up to a sign) and with the roles of the chiral and anti-chiral rings interchanged. These orbifolds thus constitute a possible mirror pair. Furthermore, new pairs of conjugate models may be obtained by taking the product of old ones. We also give a sufficient (and possibly necessary) condition for two models to be conjugate, and show that it is satisfied by the mirror pairs proposed by one of the authors and Huebsch. ((orig.))

  1. Use of the genus Artemia in ecotoxicity testing

    International Nuclear Information System (INIS)

    Nunes, Bruno S.; Carvalho, Felix D.; Guilhermino, Lucia M.; Van Stappen, Gilbert

    2006-01-01

    Information related to varied uses of several species of the genus Artemia (commonly known as brine shrimp), is dispersed among literature from several scientific areas, such as Ecology, Physiology, Ecotoxicology, Aquaculture and Genetics. The present paper reviews information related to Artemia that may be considered relevant for ecotoxicity testing. Integration of different areas of scientific knowledge concerning biology, life cycle and environmental needs of Artemia is of crucial importance when considering the interpretation of results drawn from tests involving this genus. Furthermore, this paper provides suggestions to overcome problems related to toxicity assessment with the use of Artemia as test organism in bioassays, under the scope of estuarine, marine and hypersaline environments. Aspects related to variability in results, adoptable toxicity end-points, culture conditions, characteristics of species and strains, influence of geographical origins over physiological features and responses to exposure to chemical agents are considered. - The physiology, reproductive processes and general use of Artemia in modern ecotoxicological testing are reviewed

  2. Genus two partition functions of extremal conformal field theories

    International Nuclear Information System (INIS)

    Gaiotto, Davide; Yin Xi

    2007-01-01

    Recently Witten conjectured the existence of a family of 'extremal' conformal field theories (ECFTs) of central charge c = 24k, which are supposed to be dual to three-dimensional pure quantum gravity in AdS 3 . Assuming their existence, we determine explicitly the genus two partition functions of k = 2 and k = 3 ECFTs, using modular invariance and the behavior of the partition function in degenerating limits of the Riemann surface. The result passes highly nontrivial tests and in particular provides a piece of evidence for the existence of the k = 3 ECFT. We also argue that the genus two partition function of ECFTs with k ≤ 10 are uniquely fixed (if they exist)

  3. Taxonomic Studies on the Genus Arnebia Forssk. (Boraginaceae in India

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    Kumar Ambrish

    2014-12-01

    Full Text Available The genus Arnebia Forssk. in India is taxonomically studied based on field surveys, collection of live plants, consultation of herbarium and literature. The genus is represented in India by 10 taxa including 8 species and 2 varieties viz., Arnebia bhattacharyyae K. Ambrish & S.K. Srivast., A. benthamii (Wall. ex G. Don I.M. Johnst., A. euchroma ( Royle I.M. Johnst., A. guttata Bunge, A. hispidissima (Sieber ex Lehm. A.DC., A. linearifolia A.DC., A. griffithii Boiss., A. nandadeviensis K. Chandra Sek. & R.S. Rawal , A. euchroma var. grandis (Bornm. Kazmi and A. guttata var. thomsonii (C.B. Clarke Kazmi, distributed in Jammu & Kashmir, Himachal Pradesh and Uttarakhand in North-West Himalaya to Uttar Pradesh, Punjab and Rajasthan in India. Dichotomous keys to all the species in India along with taxonomic description, distribution, illustrations and images of most of the species including type and their economic importance are provided.

  4. Phylogeny of the genus Stephomyia Tavares, 1916 (Diptera: Cecidomyiidae

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    V. C. Maia

    2017-06-01

    Full Text Available Abstract Stephomyia Tavares, 1916 comprises seven species, all Neotropical: S. clavata (Tavares, 1920; S. epeugeniae Gagné, 1994; S. espiralis Maia, 1993; S. mina Maia, 1993; S. rotundifoliorum Maia, 1993; S. tetralobae Maia, 1993; and S. eugeniae (Felt, 1913. In the present study, a cladistic analysis based upon adult, pupa, larva and gall morphological characters as well as host plant data is carried out in order to discuss the monophyly of the genus and the relationships among the known species. The Stephomyia monophyly was supported by eight synapomorphies: five homoplastic characters and three non-homoplastic characters. Analyzes showed S. clavata with great instability within the genus, probably due to lack of larva, pupa and female data, so S. clavata was deactivated in analyze. The topology found was (S. mina ((S. eugeniae + S. epeugeniae (S. tetralobae (S. rotundifoliorum + S. espiralis.

  5. Water wave communication in the genus Bombina (amphibia)

    Science.gov (United States)

    Seidel, B.; Yamashita, M.; Choi, I.-H.; Dittami, J.

    2001-01-01

    Amphibians were phylogenetically the first vertebrates to leave the aquatic environment and cope with terrestrial conditions including effects of gravity and substrate on movement and communication. Studies of extant primitive amphibians, which have conserved ancestral morphology and behavior, may help us to understand how gravitational adaptation from aquatic to terrestrial environments occurred. The anuran genus Bombina is a candidate for this type of investigation. In particular, a member of this genus, B. orientalis, is known for its low reaction threshold to minor changes of angular acceleration. We hypothesize that a heightened sensitivity to angular and mechanical accelerations evolved with wave communication. Comparisons of such behavior among B. variegata, B. bombina and B. orientalis may shed light on the evolution of reproductive systems based on water wave communication and relevant vestibular sensitivity. This may represent a transition to derived vocalization modes, which is seen in B. bombina to a certain degree.

  6. Assycuera, a new Neotropical genus of Ancylocerina (Coleoptera, Cerambycidae, Trachyderini

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    Dilma Solange Napp

    2001-09-01

    Full Text Available Assycuera gen. n. (type species: Anyclocera macroteta Bates, 1880 is proposed to accomodate four species formerly placed in Ancylocera Audinet-Serville, 1834: Assycuera waterhousei (White, 1855 comb, n., Assycuera macrotela (Bates, 1880 comb, n., Assycuera rubella (Bates, 1892, comb. n. and Assycuera scabricollis (Chemsak, 1963 comb. n. The characters used to assemble these species into the new genus were mainly the gradually clavate femora and the antennae of the male with the 11th segment elongate, filiform, the scape not enlarged at base and the pedicel not projected outerly. All the species are redescribed, illustrated and keyed. The males of Assycuera scabricollis and A. rubella are described for the first time. The key presented by Monné & Napp (2000b for the Neotropical genera of Ancylocerina is modified in order to include the new genus.

  7. Systematics and biology of the African genus Ferraria (Iridaceae: Irideae

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    P. Goldblatt

    2011-12-01

    Full Text Available Following field and herbarium investigation of the subequatorial African and mainly western southern African Ferraria Burm. ex Mill. (Iridaceae: Iridoideae, a genus of cormous geophytes, we recognize 18 species, eight more than were included in the 1979 account of the genus by M.P. de Vos. One of these, F. ovata, based on Moraea ovata Thunb. (1800, was only discovered to be a species of Ferraria in 2001, and three more are the result of our different view of De Vos’s taxonomy. In tropical Africa, F. glutinosa is recircumscribed to include only mid- to late summer-flowering plants, usually with a single basal leaf and with purple to brown flowers often marked with yellow. A second summer-flowering species, F. candelabrum, includes taller plants with several basal leaves. Spring and early summer-flowering plants lacking foliage leaves and with yellow flowers from central Africa are referred to F. spithamea or F. welwitschii respectively.

  8. Chemical constituents and biological activities of the genus Linaria (Scrophulariaceae).

    Science.gov (United States)

    Cheriet, Thamere; Mancini, Ines; Seghiri, Ramdane; Benayache, Fadila; Benayache, Samir

    2015-01-01

    This is a review on 95 references dealing with the genus Linaria (Scrophularioideae-Antirrhineae tribe), a known genus of the Scrophulariaceae family, which comprises about 200 species mainly distributed in Europe, Asia and North Africa. The use of some Linaria species in folk medicine has attracted the attention for chemical and biological studies. This report is aimed to be a comprehensive overview on the isolated or identified known and often new metabolites from the 41 Linaria species so far cited. It is organised presenting first the phytochemical classes of alkaloids, polyphenols including flavonoids, the latter being quite diffused and mostly present as flavones, flavonols and their glycosides, and terpenoids including iridoids and steroids. Second, the results from biological investigation on plant extracts, pure natural products isolated from Linaria species and some synthetic derivatives are reported, with antitumour, anti-acetylcholinesterase, anti-inflammatory and analgesic, antioxidant and antibacterial activities.

  9. Revision of the genus Intybia (Coleoptera, Malachiidae from Japan

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    Hiroshi Ikeda

    2017-06-01

    Full Text Available Japanese species of the genus Intybia are revised taxonomically, with the examination of the endophallic structure. Eight species, including one new species Intybia donan sp. nov. from Yonaguni-jima, are recognized. All species are described or redescribed with a key and figures. The endophallic structure contains one primary sclerite (gonoporal piece, three secondary sclerites (ligula, semi-gonoporal piece, and spinous plate in some species, and a membranous basal area densely covered with many spines (spinous area. Based on the structures of the endophallus, the Japanese members of the genus are divided into two species groups (the histrio and pelegrini groups. The pelegrini species group is furthermore subdivided into three subgroups (subgroups 1–3. New distributional records are as follows: I. histrio from Hachijô-jima and Tanega-shima; I. niponica from Sakhalin and I. takaraensis from Tokuno-shima and Amami-Ôshima.

  10. THE MYRMICINE ANT GENUS ALLOMERUS MAYR (HYMENOPTERA: FORMICIDAE

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    FERNÁNDEZ FERNANDO

    2007-06-01

    Full Text Available The Neotropical myrmicine ant genus Allomerus Mayr is revised. The genus isapparently monophyletic based on the antennal club confi guration. I recognize 8 species(4 described as new: Allomerus brevipilosus n. sp. (Brazil, A. decemarticulatusMayr (Brazil, French Guiana, A. dentatus n. sp. (Venezuela, A. maietae n. sp.(Brazil, A. octoarticulatus Mayr (=A. tuberculatus Forel n. syn. = A. octoarticulatusvar. demerarae W. M. Wheeler n. syn. = A. novemarticulatus Wheeler & Mann n.syn. [Brazil, Bolivia, Colombia, French Guiana, Peru], A. septemarticulatus Mayrstatus rev. (Brazil, A. undecemarticulatus n. sp. (Venezuela and A. vogeli Kempf(Venezuela, Brazil. Better knowledge of the taxonomy of Allomerus is needed tounderstand the apparently sporadic differences in antennal fl agellomere number andspeciation processes that are probably linked to plant cavity colonization.

  11. The lichen family Parmeliaceae in Poland. II. The genus Cetrelia

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    Martin Kukwa

    2012-03-01

    Full Text Available In a study of the genus Cetrelia in Poland, four taxa have been identified, two of which, C. chicitae and C. monachorum, are reported for the first time from the country. All taxa differ in chemistry and subtle morphological characters. Cetrelia monachorum is the commonest member of the genus in Poland (237 records, whereas C. chicitae is known only from 6 records. All taxa are endangered, and three, C. cetrarioides, C. chicitae and C. olivetorum, appear to be critically so, thus deserving the category CR; although C. monachorum is the most frequent, it is not common and should be treated as endangered (EN. The distribution of all taxa, their habitat requirements, as well as morphology and secondary chemistry, are discussed.

  12. Genus-Wide Assessment of Lignocellulose Utilization in the Extremely Thermophilic Genus Caldicellulosiruptor by Genomic, Pangenomic, and Metagenomic Analyses.

    Science.gov (United States)

    Lee, Laura L; Blumer-Schuette, Sara E; Izquierdo, Javier A; Zurawski, Jeffrey V; Loder, Andrew J; Conway, Jonathan M; Elkins, James G; Podar, Mircea; Clum, Alicia; Jones, Piet C; Piatek, Marek J; Weighill, Deborah A; Jacobson, Daniel A; Adams, Michael W W; Kelly, Robert M

    2018-05-01

    Metagenomic data from Obsidian Pool (Yellowstone National Park, USA) and 13 genome sequences were used to reassess genus-wide biodiversity for the extremely thermophilic Caldicellulosiruptor The updated core genome contains 1,401 ortholog groups (average genome size for 13 species = 2,516 genes). The pangenome, which remains open with a revised total of 3,493 ortholog groups, encodes a variety of multidomain glycoside hydrolases (GHs). These include three cellulases with GH48 domains that are colocated in the glucan degradation locus (GDL) and are specific determinants for microcrystalline cellulose utilization. Three recently sequenced species, Caldicellulosiruptor sp. strain Rt8.B8 (renamed here Caldicellulosiruptor morganii ), Thermoanaerobacter cellulolyticus strain NA10 (renamed here Caldicellulosiruptor naganoensis ), and Caldicellulosiruptor sp. strain Wai35.B1 (renamed here Caldicellulosiruptor danielii ), degraded Avicel and lignocellulose (switchgrass). C. morganii was more efficient than Caldicellulosiruptor bescii in this regard and differed from the other 12 species examined, both based on genome content and organization and in the specific domain features of conserved GHs. Metagenomic analysis of lignocellulose-enriched samples from Obsidian Pool revealed limited new information on genus biodiversity. Enrichments yielded genomic signatures closely related to that of Caldicellulosiruptor obsidiansis , but there was also evidence for other thermophilic fermentative anaerobes ( Caldanaerobacter , Fervidobacterium , Caloramator , and Clostridium ). One enrichment, containing 89.8% Caldicellulosiruptor and 9.7% Caloramator , had a capacity for switchgrass solubilization comparable to that of C. bescii These results refine the known biodiversity of Caldicellulosiruptor and indicate that microcrystalline cellulose degradation at temperatures above 70°C, based on current information, is limited to certain members of this genus that produce GH48 domain

  13. Taxonomic notes on the genus Bellenden Chandler (Coleoptera, Staphylinidae, Pselaphinae).

    Science.gov (United States)

    Yin, Zi-Wei; Jiang, Ri-Xin

    2016-01-01

    The monotypic genus Buobellenden Yin & Nomura, 2009 is placed as a junior synonym of Bellenden Chandler, 2001. This act results in Bellenden jingyuanensis (Yin & Nomura), comb. n. (from Buobellenden ). A new species, Bellenden siguniang Yin & Jang, sp. n. , collected from the alpine area in Sichuan, SW China, is described, illustrated, and distinguished from all congeners. A new illustration of the aedeagus of Buobellenden jingyuanensis is given.

  14. AMINOACID COMPOSITION OF SOME SPECIES FROM INULA GENUS

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    A. A. Kruglaya

    2016-01-01

    Full Text Available The majority of medicinal plants and medicinal plant raw materials are understudied pharmacgostically. These plants include species from Inula genus, which range in Russia amounts to up to 40 species. Rhizomes and roots of the Inula helenium L. are broadly applied in scientific and traditional medicine. They have expectorate, styptic, and anti-inflammatory properties.The purpose of the study was to determine the amino-acid composition of some species from Inula genus (Inula germanica, Inula ensifolia, Inula aspera, Inula orientalis, which grow in different regions if the North Caucasus.Methods. The studies were carried out using AAA 400 amino acid analyzer, highly specialized automatized liquid chromatographer with computer management. Aboveground parts of the plants, gathered in mass blossom phase from wild-growing plants and then dried out were the objects of the study.Results. For the first time the amino acid composition and raw protein of some species from Inula genus was determined (Inula germanica, Inula ensifolia, Inula aspera, Inula orientalis, 16 amino acids were discovered, 7 of which were essential, and raw proteins which substantival composition amounted to 16.19% in Inula germanica, 10.78% in Inula ensifolia, Inula aspera (11.15%, Inula orientalis (13.94%.Conclusion. The results of the studies conducted broaden the data about amino acids and protein composition and quantitative content in the species from Inula genus and can be used to develop methods of analysis of the drugs, obtained from these plants.

  15. Bioactive Natural Products of Marine Sponges from the Genus Hyrtios

    OpenAIRE

    Nourhan Hisham Shady; Ebaa M. El-Hossary; Mostafa A. Fouad; Tobias A. M. Gulder; Mohamed Salah Kamel; Usama Ramadan Abdelmohsen

    2017-01-01

    Marine sponges are known as a rich source for novel bioactive compounds with valuable pharmacological potential. One of the most predominant sponge genera is Hyrtios, reported to have various species such as Hyrtios erectus, Hyrtios reticulatus, Hyrtios gumminae, Hyrtios communis, and Hyrtios tubulatus and a number of undescribed species. Members of the genus Hyrtios are a rich source of natural products with diverse and valuable biological activities, represented by different chemical classe...

  16. The oribatid mite genus Benoibates (Acari, Oribatida, Oripodidae

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    Sergey Ermilov

    2014-09-01

    Full Text Available Two species of oribatid mites of the genus Benoibates (Oribatida, Oripodidae, i.e., B. bolivianus Balogh & Mahunka, 1969(a and B. minimus Mahunka, 1985, are recorded for the first time in Costa Rica. Both are redescribed in details, using drawings, images and SEM micrographs, on the basis of Costa Rican specimens. An identification key to the known species of Benoibates is given.

  17. Phylogenetic species delimitation for crayfishes of the genus Pacifastacus.

    Science.gov (United States)

    Larson, Eric R; Castelin, Magalie; Williams, Bronwyn W; Olden, Julian D; Abbott, Cathryn L

    2016-01-01

    Molecular genetic approaches are playing an increasing role in conservation science by identifying biodiversity that may not be evident by morphology-based taxonomy and systematics. So-called cryptic species are particularly prevalent in freshwater environments, where isolation of dispersal-limited species, such as crayfishes, within dendritic river networks often gives rise to high intra- and inter-specific genetic divergence. We apply here a multi-gene molecular approach to investigate relationships among extant species of the crayfish genus Pacifastacus, representing the first comprehensive phylogenetic study of this taxonomic group. Importantly, Pacifastacus includes both the widely invasive signal crayfish Pacifastacus leniusculus, as well as several species of conservation concern like the Shasta crayfish Pacifastacus fortis. Our analysis used 83 individuals sampled across the four extant Pacifastacus species (omitting the extinct Pacifastacus nigrescens), representing the known taxonomic diversity and geographic distributions within this genus as comprehensively as possible. We reconstructed phylogenetic trees from mitochondrial (16S, COI) and nuclear genes (GAPDH), both separately and using a combined or concatenated dataset, and performed several species delimitation analyses (PTP, ABGD, GMYC) on the COI phylogeny to propose Primary Species Hypotheses (PSHs) within the genus. All phylogenies recovered the genus Pacifastacus as monophyletic, within which we identified a range of six to 21 PSHs; more abundant PSHs delimitations from GMYC and ABGD were always nested within PSHs delimited by the more conservative PTP method. Pacifastacus leniusculus included the majority of PSHs and was not monophyletic relative to the other Pacifastacus species considered. Several of these highly distinct P. leniusculus PSHs likely require urgent conservation attention. Our results identify research needs and conservation priorities for Pacifastacus crayfishes in western

  18. Lie Symmetries of Birational Maps Preserving Genus 0 Fibrations

    OpenAIRE

    Llorens, Mireia; Mañosa, Víctor

    2015-01-01

    We prove that any planar birational integrable map, which preserves a fibration given by genus 0 curves has a Lie symmetry and some associated invariant measures. The obtained results allow to study in a systematic way the global dynamics of these maps. Using this approach, the dynamics of several maps is described. In particular we are able to give, for particular examples, the explicit expression of the rotation number function, and the set of periods of the considered maps. Peer Revi...

  19. SPECIES OF GENUS ASPERGILLUS ON GRAPE SLOVAK ORIGIN

    OpenAIRE

    Dana Tančinová; Ľubomír Rybárik; Zuzana Mašková; Zuzana Barboráková; Soňa Felšöciová

    2014-01-01

    The aim of this study was to detect species of genus Aspergillus from wine grapes (berries, surface sterilized berries - endogenous mycobiota, from damaged berries and grape juice) of Slovak origin. We analyzed 20 samples of grapes, harvested in 2011 from various wine-growing regions. For the isolation of species we used the method of direct plating berries, surface-sterilized berries (using 0.4% freshly pre-pared chlorine), and damaged berries on DRBC (Dichloran Rose Bengal Chloramphenicol a...

  20. Dryopsis (Dryopteridaceae, A Fern Genus New to Vietnam

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    Hui-Hui Ding

    2013-03-01

    Full Text Available Dryopsis clarkei (Baker Holttum & P.J. Edwards, representing the whole genus, is reported new to Vietnam. A detailed description, including the variation of gross morphology, spore morphology, and chromosome counts, is provided by means of words as well as photographs or drawings. Dryopsis clarkei is for the first time demonstrated to be a sexual diploid (2n = 82, with rather stable morphology except for the length of stipe.