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Sample records for genus arachis studied

  1. Heterologous microsatellite primer pairs informative for the whole genus Arachis

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    Andrea Akemi Hoshino

    2006-01-01

    Full Text Available The genus Arachis currently comprises 69 described species, some of which have potential and real value as human and animal foods. These Arachis species have been collected and maintained in germplasm banks to provide material that can be used as sources of genes in breeding programs and for the selection of new cultivars. One of the principal objectives of germplasm conservation is the evaluation of genetic variability, which is best conducted using molecular markers. We investigated the use of heterologous primers to amplify microsatellite loci that could be used to evaluate genetic variability in Arachis germplasm. Fifteen microsatellite primer pairs were tested in 76 accessions of 34 species from the nine Arachis sections. The data indicated that heterologous primers were very useful in Arachis since they had high transferability among the species (91% and allowed the amplification of very polymorphic putative loci, which allowed both the characterization of most accessions and to make inferences about the mating systems of some species analyzed. Our data also revealed that the germplasm analyzed showed high variability, even when represented by few accessions.

  2. TAXONOMY OF THE GENUS ARACHIS (LEGUMINOSAE Taxonomy of the genus Arachis (Leguminosae

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    Antonio Krapovickas

    2010-08-01

    Full Text Available

    Pasaron casi 100 años entre la designación por Linneo de la entonces única especie de Arachis (A. hypogaea L. conocida por los europeos, y el primer tratamiento taxonómico del
    género por Bentham en 1841. Durante los siguientes 100 años, aparecieron cinco a diez
    descripciones de especies adicionales, que asignaban diferentes especies a los mismos
    nombres, y diferentes nombres a las mismas especies. A mediados del Siglo XX, era imposible
    examinar un ejemplar de herbario de Arachis y asignar con alguna certeza algún epíteto a algún
    espécimen (que no fuera un ejemplar tipo excepto a A. hypogaea, A. guaranitica, A. tuberosa y
    A. villosulicarpa.
    En nuestro tratamiento, la literatura de este caos botánico en Arachis esta revisada en detalle y
    se hace un análisis de los fundamentos de su ocurrencia. Se demuestra que las bases de la
    confusión moran en la combinación de la naturaleza esotérica de los caracteres morfológicos
    diferenciados de Arachis, de los especímenes fragmentarios de antaño, y de la representación
    de especies por plántulas.
    Además, se relata cómo, en 1959, decidimos reexplorar la localidad tipo de cada especie hasta
    entonces conocida, y recolectar allí especímenes de las plantas enteras y así resolver el
    problema. Después de treinta y cinco años, dos generaciones de coleccionistas de plantas, y
    alrededor de 2000 colecciones, presentamos aquí las descripciones de 69 especies de Arachis,
    especies distribuidas en Sudamérica al este de los Andes, al sud del Amazonas, al norte de La
    Plata y desde el noroeste argentino hasta el nordeste de Brasil.
    Descubrimos muy pronto que los caracteres más significativos de Arachis residen en sus
    estructuras subterráneas, incluyendo sus frutos, tallos rizomatosos, sistemas radicales e

  3. TAXONOMIA DEL GENERO ARACHIS (LEGUMINOSAE Taxonomy of the genus Arachis (Leguminosae

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    Antonio Krapovickas

    2010-11-01

    Full Text Available

    Pasaron casi 100 años entre la designación por Linneo de la entonces única especie de Arachis (A. hypogaea L. conocida por los europeos, y el primer tratamiento taxonómico del
    género por Bentham en 1841. Durante los siguientes 100 años, aparecieron cinco a diez descripciones de especies adicionales, que asignaban diferentes especies a los mismos nombres, y diferentes nombres a las mismas especies. A mediados del Siglo XX, era imposible
    examinar un ejemplar de herbario de Arachis y asignar con alguna certeza algún epíteto a algún espécimen (que no fuera un ejemplar tipo excepto a A. hypogaea, A. guaranitica, A. tuberosa y
    A. villosulicarpa.
    En nuestro tratamiento, la literatura de este caos botánico en Arachis esta revisada en detalle y
    se hace un análisis de los fundamentos de su ocurrencia. Se demuestra que las bases de la
    confusión moran en la combinación de la naturaleza esotérica de los caracteres morfológicos diferenciados de Arachis, de los especímenes fragmentarios de antaño, y de la representación
    de especies por plántulas.
    Además, se relata cómo, en 1959, decidimos reexplorar la localidad tipo de cada especie hasta
    entonces conocida, y recolectar allí especímenes de las plantas enteras y así resolver el problema. Después de treinta y cinco años, dos generaciones de coleccionistas de plantas, y
    alrededor de 2000 colecciones, presentamos aquí las descripciones de 69 especies de Arachis,
    especies distribuidas en Sudamérica al este de los Andes, al sud del Amazonas, al norte de La
    Plata y desde el noroeste argentino hasta el nordeste de Brasil.
    Descubrimos muy pronto que los caracteres más significativos de Arachis residen en sus estructuras subterráneas, incluyendo sus frutos, tallos rizomatosos, sistemas radicales e

  4. Taxonomy of the genus Arachis (Leguminosae by Antonio Krapovickas and Walton C. Gregory

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    Antonio Krapovickas

    2007-01-01

    Full Text Available Almost 100 years elapsed between Linnaeus’ naming the then lone species of Arachis (A.hypogaea L. known to Europeans, and the first taxonomic treatment of the genus by Bentham in1841. During the next 100 years five to ten additional species descriptions appeared, assigningdifferent species to the same names, and different names to the same species. By mid-20thCentury, it was impossible to examine any herbarium collection of Arachis and assign any epithetwith any assurance to any specimen (which was not a type collection except to A. hypogaea, A.guaranitica, A. tuberosa and A. villosulicarpa.In our treatment, the literature of this botanical chaos in Arachis is reviewed in detail and anassessment is made of the foundations for its occurrence. It is shown that the bases for theconfusion lay in the combination of the esoteric nature of the differentiating morphologicalfeatures of Arachis, the fragmentary early collections, and the representation of species byseedling specimens.Also, it is related how, in 1959, we decided to re-explore the type locality of each species thenknown, collect therein complete plant specimens and thereby resolve the problem. Thirty-fiveyears, two generations of plant collectors and around 2000 collections later, we present here 69species descriptions of Arachis, species distributed in South America east of the Andes, south ofthe Amazon, north of La Plata and from NW Argentina to NE Brazil.We soon discovered that the most significant characters of Arachis lay in their undergroundstructures, including their fruits, rhizomatous stems, root systems and hypocotyls.We showed that these defining characters tended to cluster the collections into groups whichwere associated with generally different geographic areas and ecological features.We drew a sample of 100 collections representing these clusters, areas and features, andarranged them in a hybridization diallel and showed, in crosses between collections representingdifferent

  5. Genetic diversity analysis in the section Caulorrhizae (genus Arachis) using microsatellite markers

    Science.gov (United States)

    2010-01-01

    Diversity in 26 microsatellite loci from section Caulorrhizae germplasm was evaluated by using 33 accessions of A. pintoi Krapov. & W.C. Gregory and ten accessions of Arachis repens Handro. Twenty loci proved to be polymorphic and a total of 196 alleles were detected with an average of 9.8 alleles per locus. The variability found in those loci was greater than the variability found using morphological characters, seed storage proteins and RAPD markers previously used in this germplasm. The high potential of these markers to detect species-specific alleles and discriminate among accessions was demonstrated. The set of microsatellite primer pairs developed by our group for A. pintoi are useful molecular tools for evaluating Section Caulorrhizae germplasm, as well as that of species belonging to other Arachis sections. PMID:21637613

  6. Genetic diversity analysis in the section Caulorrhizae (genus Arachis using microsatellite markers

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    Darío A. Palmieri

    2010-01-01

    Full Text Available Diversity in 26 microsatellite loci from section Caulorrhizae germplasm was evaluated by using 33 accessions of A. pintoi Krapov. & W.C. Gregory and ten accessions of Arachis repens Handro. Twenty loci proved to be polymorphic and a total of 196 alleles were detected with an average of 9.8 alleles per locus. The variability found in those loci was greater than the variability found using morphological characters, seed storage proteins and RAPD markers previously used in this germplasm. The high potential of these markers to detect species-specific alleles and discriminate among accessions was demonstrated. The set of microsatellite primer pairs developed by our group for A. pintoi are useful molecular tools for evaluating Section Caulorrhizae germplasm, as well as that of species belonging to other Arachis sections.

  7. A recirculating hydroponic system for studying peanut (Arachis hypogaea L.)

    Science.gov (United States)

    Mackowiak, C. L.; Wheeler, R. M.; Stutte, G. W.; Yorio, N. C.; Ruffe, L. M.; Sager, J. C. (Principal Investigator)

    1998-01-01

    Peanut (Arachis hypogaea L.) plants were grown hydroponically, using continuously recirculating nutrient solution. Two culture tray designs were tested; one tray design used only nutrient solution, while the other used a sphagnum-filled pod development compartment just beneath the cover and above the nutrient solution. Both trays were fitted with slotted covers to allow developing gynophores to reach the root zone. Peanut seed yields averaged 350 gm-2 dry mass, regardless of tray design, suggesting that substrate is not required for hydroponic peanut production.

  8. Characterization and transferability of microsatellite markers of the cultivated peanut (Arachis hypogaea

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    Palmieri Dario A

    2007-02-01

    Full Text Available Abstract Background The genus Arachis includes Arachis hypogaea (cultivated peanut and wild species that are used in peanut breeding or as forage. Molecular markers have been employed in several studies of this genus, but microsatellite markers have only been used in few investigations. Microsatellites are very informative and are useful to assess genetic variability, analyze mating systems and in genetic mapping. The objectives of this study were to develop A. hypogaea microsatellite loci and to evaluate the transferability of these markers to other Arachis species. Results Thirteen loci were isolated and characterized using 16 accessions of A. hypogaea. The level of variation found in A. hypogaea using microsatellites was higher than with other markers. Cross-transferability of the markers was also high. Sequencing of the fragments amplified using the primer pair Ah11 from 17 wild Arachis species showed that almost all wild species had similar repeated sequence to the one observed in A. hypogaea. Sequence data suggested that there is no correlation between taxonomic relationship of a wild species to A. hypogaea and the number of repeats found in its microsatellite loci. Conclusion These results show that microsatellite primer pairs from A. hypogaea have multiple uses. A higher level of variation among A. hypogaea accessions can be detected using microsatellite markers in comparison to other markers, such as RFLP, RAPD and AFLP. The microsatellite primers of A. hypogaea showed a very high rate of transferability to other species of the genus. These primer pairs provide important tools to evaluate the genetic variability and to assess the mating system in Arachis species.

  9. Genetic analysis of yield in peanut (Arachis hypogaea L.) using ...

    African Journals Online (AJOL)

    Jane

    2011-07-20

    Jul 20, 2011 ... L.) using mixed model of major gene plus polygene. Xinyou Zhang1,2, Suoyi ... to the genus Arachis that incorporates 69 species. The domesticated .... that, the distribution characteristics of yield in RIL population in different ...

  10. Successful crosses between fungal-resistant wild species of Arachis (section Arachis and Arachis hypogaea

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    Alessandra Pereira Fávero

    2015-09-01

    Full Text Available Peanut (Arachis hypogaea is the fifth most produced oil crop worldwide. Besides lack of water, fungal diseases are the most limiting factors for the crop. Several species of Arachis are resistant to certain pests and diseases. This study aimed to successfully cross the A-genome with B-K-A genome wild species previously selected for fungal disease resistance, but that are still untested. We also aimed to polyplodize the amphihaploid chromosomes; cross the synthetic amphidiploids and A. hypogaea to introgress disease resistance genes into the cultivated peanut; and analyze pollen viability and morphological descriptors for all progenies and their parents. We selected 12 A-genome accessions as male parents and three B-genome species, one K-genome species, and one A-genome species as female parents. Of the 26 distinct cross combinations, 13 different interspecific AB-genome and three AA-genome hybrids were obtained. These sterile hybrids were polyploidized and five combinations produced tetraploid flowers. Next, 16 combinations were crossed between A. hypogaea and the synthetic amphidiploids, resulting in 11 different hybrid combinations. Our results confirm that it is possible to introgress resistance genes from wild species into the peanut using artificial hybridization, and that more species than previously reported can be used, thus enhancing the genetic variability in peanut genetic improvement programs.

  11. Identification of candidate genome regions controlling disease resistance in Arachis

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    Pike Jodie

    2009-08-01

    Full Text Available Abstract Background Worldwide, diseases are important reducers of peanut (Arachis hypogaea yield. Sources of resistance against many diseases are available in cultivated peanut genotypes, although often not in farmer preferred varieties. Wild species generally harbor greater levels of resistance and even apparent immunity, although the linkage of agronomically un-adapted wild alleles with wild disease resistance genes is inevitable. Marker-assisted selection has the potential to facilitate the combination of both cultivated and wild resistance loci with agronomically adapted alleles. However, in peanut there is an almost complete lack of knowledge of the regions of the Arachis genome that control disease resistance. Results In this work we identified candidate genome regions that control disease resistance. For this we placed candidate disease resistance genes and QTLs against late leaf spot disease on the genetic map of the A-genome of Arachis, which is based on microsatellite markers and legume anchor markers. These marker types are transferable within the genus Arachis and to other legumes respectively, enabling this map to be aligned to other Arachis maps and to maps of other legume crops including those with sequenced genomes. In total, 34 sequence-confirmed candidate disease resistance genes and five QTLs were mapped. Conclusion Candidate genes and QTLs were distributed on all linkage groups except for the smallest, but the distribution was not even. Groupings of candidate genes and QTLs for late leaf spot resistance were apparent on the upper region of linkage group 4 and the lower region of linkage group 2, indicating that these regions are likely to control disease resistance.

  12. STUDY ON THE PERFORMANCE OF GROUNDNUT (ARACHIS HYPOGEA L. GENOTYPES FOR SEED YIELD AND QUALITY TRAITS

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    Chaitanya R. KOKKIRIPATI

    2015-12-01

    Full Text Available The present investigation was carried out at Department of Genetics and Plant Breeding, Sam Higginbottom Institute of Agriculture, Technology & Sciences (SHIATS, Allahabad, Uttar Pradesh during kharif 2014. The experimental material consisted of 11 Groundnut genotypes along with one check (IND-156. The genotypes were sown at Field Experimentation Centre in three replications adopting randomized block design to evaluate seed yield and quality traits. Analysis of variance revealed that the presence of considerable variation among the genotypes for all the characters studied. On the basis of mean performance, genotype ICG 14127 revealed better performance in primary branches/ plant, pods per plant, pod yield/plant, seed yield/plant and ICG 14482 showed better performance in kernel yield q/ha, oil content, oil yield while ICG 188 showed higher protein content.

  13. Character association studies of drought tolerant attributes in groundnut (Arachis hypogaea L.

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    D.Nirmala and V.Jayalakshmi

    2015-06-01

    Full Text Available An investigation was carried out to study character association among physiological and drought tolerant attributes with 30 groundnut genotypes at College farm, Agricultural College, Mahanandi, Kurnool district, Andhra Pradesh. It indicated that the characters pod yield per plant, shelling out turn, harvest index, number of mature pods per plant, number of sound mature kernel, plant height, specific leaf area, crop growth rate at 75 DAS to harvest and relative growth rate at 75 DAS to harvest were significantly and positively inter-related among themselves and also with the kernel yield per plant. Hence, the improvement of any of these attributes would simultaneously improve the kernel yield per plant. Pod yield per plant exerted high positive direct effect on kernel yield per plant followed by shelling out turn. Plant height, number of mature pods per plant, number of sound mature kernels, harvest index and CGR at 75 DAS to harvest exerted their indirect effect through source contributions for several other characters. It is, therefore, inferred that these characters are to be given importance while formulating selection criteria in breeding programmes to isolate lines with genetic potential for high kernel yield.

  14. Cytotaxonomic studies in the genus Campanula

    NARCIS (Netherlands)

    Gadella, Th.W.J.

    1964-01-01

    De Candolle (1830) divided the genus Campanula into two large sections on basis of the presence or absence of calyx-appendages between the calyx-lobes. Boissier (1875) attached great value to the mode of dehiscence of the capsule, and divided the genus into two sections. None of the existing classif

  15. Optimized Extraction of Resveratrol from Arachis repens Handro by Ultrasound and Microwave: A Correlation Study with the Antioxidant Properties and Phenol Contents

    Science.gov (United States)

    Garcia, Leonardo; Garcia, Renata; Sutili, Felipe; Souza, Rodrigo De

    2016-01-01

    The vegetal species Arachis repens, commonly known as peanut grass, was studied and, for the first time, we detected the presence of the bioactive compound trans-resveratrol (t-RSV). We compared the efficiency of three different methodologies (conventional maceration [CM], ultrasound-assisted extractions [UAE], and microwave-assisted extractions [MAE]) concerning total phenolics (TP) and resveratrol (t-RSV) content, followed by antioxidant activity (AA) evaluation. By CM, at 1 h, the highest RSV content (1.024 ± 0.036 mg/L) and, correspondingly, the highest DPPH capture (23.90 ± 0.04%) were found. The TP contents, at 1 h, presented the highest value (27.26 ± 0.26 mg/g GAE). By the UAE, the maximum yields of TP (357.18 mg/g GAE) and RSV (2.14 mg/L), as well as, the highest AA (70.95%), were obtained by 5 min after a maceration pretreatment, on the solid-solvent ratio 1 : 40 w/v. For MAE, a central composite rotatable design (CCRD) was applied followed by the FFD design in order to evaluate the statistical effects of four independent variables on the extraction of RSV. The optimal conditions established for obtaining the highest recovery (2.516 mg/g) were 20 min; 90% MeOH aq.; 120 rpm; 60°C; and solid-solvent ratio: 1 : 35 w/v. Relevant correlations were established considering the TP and RSV contents, as well as the AA, corroborating obvious advantages of such techniques in terms of high extraction efficiency in shorter times. PMID:28116343

  16. Optimized Extraction of Resveratrol from Arachis repens Handro by Ultrasound and Microwave: A Correlation Study with the Antioxidant Properties and Phenol Contents

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    Leonardo Garcia

    2016-01-01

    Full Text Available The vegetal species Arachis repens, commonly known as peanut grass, was studied and, for the first time, we detected the presence of the bioactive compound trans-resveratrol (t-RSV. We compared the efficiency of three different methodologies (conventional maceration [CM], ultrasound-assisted extractions [UAE], and microwave-assisted extractions [MAE] concerning total phenolics (TP and resveratrol (t-RSV content, followed by antioxidant activity (AA evaluation. By CM, at 1 h, the highest RSV content (1.024±0.036 mg/L and, correspondingly, the highest DPPH capture (23.90±0.04% were found. The TP contents, at 1 h, presented the highest value (27.26±0.26 mg/g GAE. By the UAE, the maximum yields of TP (357.18 mg/g GAE and RSV (2.14 mg/L, as well as, the highest AA (70.95%, were obtained by 5 min after a maceration pretreatment, on the solid-solvent ratio 1 : 40 w/v. For MAE, a central composite rotatable design (CCRD was applied followed by the FFD design in order to evaluate the statistical effects of four independent variables on the extraction of RSV. The optimal conditions established for obtaining the highest recovery (2.516 mg/g were 20 min; 90% MeOH aq.; 120 rpm; 60°C; and solid-solvent ratio: 1 : 35 w/v. Relevant correlations were established considering the TP and RSV contents, as well as the AA, corroborating obvious advantages of such techniques in terms of high extraction efficiency in shorter times.

  17. A study on the genus Digitaria (Poaceae in Iran

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    Mohammad Amini Rad

    2015-10-01

    Full Text Available In current research, the genus Digitaria has been studied in Iran. As a results, D. ischaemum, D. sanguinalis, D. sabulosa, D. ciliaris, D. nodosa with D. violascens which is reported for the first time from Iran here, are confirmed for the flora of Iran. In addition, the record of D. stricta from Iran is rejected as referable to D. violascens after the studying their specimens. Finally, a key to all species of the genus Digitaria in Iran along with morphological descriptions of species are provided.

  18. SCARDINIUS GENUS IN MOLECULAR STUDIES – A REVIEW

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    Ovidiu Popescul

    2015-12-01

    Full Text Available Scardinius is a genus of ray-finned fish in the Cyprinidae family commonly called rudds. The common rudd(Scardinius erithrophthalmus is a bentho-pelagic freshwater fish that occurs mainly in nutrient-rich, well vegetatedlowland rivers, backwaters, oxbows, ponds and lakes and it is widespread in Europe and middle Asia. It has a mediumlength of 20-30 cm, but it can reach 50 cm. The classification of cyprinids has always been controversial the morphologicaltraits have an unclear homology this led to the idea that the recognized monophyletic groups are surely misinterpreted. Thispaper aims to assess the current level of molecular data regarding Scardinius genera. Some of the molecular data obtainedfor Scardinius genus is from DNA barcoding studies on fresh water fishes, but studies regarding this genus and Cyprinidaefamily used mitochondrial genes like cytochrome b (cyt b and cytochrome oxidase (CO, but nuclear genes or nuclearmicrosatellites were also used. We found that molecular data exists for both nuclear and mitochondrial genes, but this genuswasn’t studied separately and as many of the researchers suggest more taxonomic studies are required in order to solve theuncertainties within it.

  19. Induced genetic variability and correlation studies for yield and its component traits in Groundnut (Arachis hypogaea L.

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    Channayya P. Hiremath , H. L. Nadaf and Keerthi,C.M

    2011-03-01

    Full Text Available Groundnut is one of the principal economic oilseed crops of the world, which has been exposed extensively to mutagenictreatments for induction of genetic variability. In the present experiment, estimates of genetic variability, heritability and geneticadvance were assessed for 12 different quantitative traits in the mutants derived from two Spanish Bunch groundnut cultivars, viz.TPG-41 and GPBD-4 with chemical and physical mutagenic agents. Wide genetic variations were observed for most of thequantitative traits studied as evidenced by higher mean, range, PCV and GCV values. Further genetic improvement throughselection for yield improvement should rely on number of primary branches per plant, 100-kernel weight, SMK% and shellingper cent as these mutants recorded higher genetic variability, heritability and genetic advance for these quantitative traits. Podyield was positively and significantly associated with number of primary branches, pod weight per plant, 100-kernel weight,sound matured per cent kernel and oil yield. These results clearly indicate that idirect selection for yield in groundnut is possiblethrough simultaneous improvement of these yield components

  20. Comparative Study of Volatile Compounds from Genus Ocimum

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    S. R. Vani

    2009-01-01

    Full Text Available There are distinct varieties of basil types in the genus Ocimum which makes them very special. Genus Ocimum is widespread over Asia, Africa and Central & Southern America. All basils are member of the Lamiaceae family. The colors of the leaves vary from bright green to purple-green and sometimes almost black. Fresh basil leaves have a strong and characteristic aroma, not comparable to any other spice, although there is a hint of clove traceable. Ocimum Sanctum, also addressed as Ocimum Tenuiflorum is a sacred plant in the Hindu culture and known as Tulasi in Tamil or Holy Basil in English. Meanwhile Ocimum Basilicum, known as Common or Sweet Basil has very dark green leaves. The genus Ocimum is cultivated for its remarkable essential oil which exhibits many usages such as in medicinal application, herbs, culinary, perfume for herbal toiletries, aromatherapy treatment and as flavoring agent. Due to varying essential oil profiles even within the same species, plants may often be classified as a different species as a result of different scents. In the present study, volatile constituents of Ocimum Sanctum and Ocimum Basilicum were extracted using various solvents and their chemical constituents were identified and quantified by using GC-MS in optimized conditions. The profiles of extract from both species were compared in an effort to investigate effects of seasonal variation on their chemical compositions. The predominant species in Ocimum Sanctum and Ocimum Basilicum was found to be methyl eugenol and methyl chavicol, respectively, during different months of analysis.

  1. Agromyces arachidis sp. nov. Isolated from a Peanut (Arachis hypogaea Crop Field

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    Chandandeep Kaur

    2013-01-01

    Full Text Available A Gram-positive, yellowish bacterium strain AK-1T was isolated from soil sample collected from peanut (Arachis hypogaea crop field and studied by using a polyphasic approach. The organism had morphological and chemotaxonomic properties consistent with its classification in the genus Agromyces. Phylogenetic analysis of the 16S rRNA gene sequence showed that strain AK-1T was closely related to Agromyces aurantiacus (98.6% followed by Agromyces soli (98.3%, Agromyces tropicus (97.6%, Agromyces ulmi (97.3%, Agromyces flavus (97.2%, and Agromyces italicus (97.0%, whereas the sequence similarity values with respect to the other Agromyces species with validly published names were between 95.3 and 96.7 %. However, the DNA-DNA hybridization values obtained between strain AK-1T and other related strains were well below the threshold that is required for the proposal of a novel species. The DNA G+C content of the strain is 71.8 mol%. The above data in combination with the phenotypic distinctiveness of AK-1T clearly indicate that the strain represents a novel species, for which the name Agromyces arachidis sp. nov. is proposed. The type strain is AK-1T (=MTCC 10524T = JCM 19251T.

  2. Nutritional chemistry of the peanut (Arachis hypogaea)

    Science.gov (United States)

    Peanuts, Arachis hypogaea, are one of the most widely consumed legume globally due to its nutrition, taste and affordability. Peanuts are protein and energy-rich and has been utilized worldwide to address the nutritional needs in developing countries. Currently, its role in a heart-healthy diet ha...

  3. Assessment of Adoption Gaps in Management of Aflatoxin Contamination of Groundnut ("Arachis Hypogaea" L.)

    Science.gov (United States)

    Kumar, G. D. S.; Popat, M. N.

    2010-01-01

    One of the major impediments for diversification of groundnut ("Arachis Hypogaea" L.) as food crop is aflatoxin contamination. The study was conducted with an objective to assess the adoption gaps in aflatoxin management practices of groundnut (AMPG) and the farmer's characteristics influencing these gaps. The study used an expost-facto…

  4. Assessment of Adoption Gaps in Management of Aflatoxin Contamination of Groundnut ("Arachis Hypogaea" L.)

    Science.gov (United States)

    Kumar, G. D. S.; Popat, M. N.

    2010-01-01

    One of the major impediments for diversification of groundnut ("Arachis Hypogaea" L.) as food crop is aflatoxin contamination. The study was conducted with an objective to assess the adoption gaps in aflatoxin management practices of groundnut (AMPG) and the farmer's characteristics influencing these gaps. The study used an expost-facto…

  5. Survey of Aspergillus and Aflatoxin in Groundnuts (Arachis hypogaea L.) and Groundnut Cake in Eastern Ethiopia

    Science.gov (United States)

    Groundnut (Arachis hypogaea L.) is an important cash and food crop in eastern Ethiopia. The lack of awareness and data on Aspergillus and aflatoxin contamination of groundnut and groundnut food products in the area are lacking. Therefore, this study was conducted to: i) assess major Aspergillus spec...

  6. 大豆和花生根瘤菌氢酶的研究%Studies on Hydrogenase from Rhizobium japonicum and Rhizobium arachis

    Institute of Scientific and Technical Information of China (English)

    许良树; 张凤章; 龙敏南; 曾定; 黄河清; 刘月英; 刘广发

    2001-01-01

    根瘤菌在共生固氮过程中因放H2所消耗的能量约占固氮总能量的40%~60%.吸氢酶则能回收和利用固氮过程所放的H2,减少能量损失,从而提高共生固氮效率.在厌氧条件下,加入防止酶蛋白聚合的试剂,利用DEAE-纤维素和SephacrylS-200柱层析,从自养性大豆根瘤菌和花生根瘤菌类菌体中分离并提纯膜结合态氢酶.纯化的两种氢酶表现相近的分子特征:均含有大(60 kD,65kD)、小(30 kD,35 kD)两个亚基;均为NiFe-氢酶,并具有较高的吸H2活性.大豆根瘤菌氢酶的纯酶组分不含Cyt b559.花生根瘤菌L8-3菌株能进行化能自养生长,诱导出高吸H2活性.根瘤菌的吸H2能明显提高固氮活性.从具有高吸H2活性的花生根瘤菌中分离并克隆吸氢基因,采用PCR和探针杂交技术,获得含有吸氢基因的质粒pZ-55.利用多种限制性内切酶构建了质粒pZ-55的物理图谱.通过三亲本杂交,将含吸氢基因的重组质粒转移到不吸H2的花生和毛豆根瘤菌中,所获得的结合株在自生和共生条件下均表达吸H2活性.以结合株接种大田花生,获得的共生根瘤的吸H2活性比接种受体株提高4倍,花生叶片和种子的含N量、产量分别提高1.7%、8.9%和9.6%.%Hydrogen produced by nitrogenase consumed 40~60%0 of energy of symbiotic nitro gen-fixation. Hydrogenase can uptake and reuse the H2 produced by nitrogenase, which results in decreasing the loss of energy and increasing the efficiency of nitrogen fixation. The membranebound hydrogenase from autotrophical cultured Rhizobium japanicum and from the bacteroids of peanut nodule have been purified and characterized. The hydrogenase from R. japonicum consists of two subunits (60 kD, 30 kD). The molecular weight of large and small subunits of hydrogenase from R. arachis is about 65 kD and 35 kD. Both hydrogenases are NiFe-hydrogenase. No cytochrome b(559) could

  7. Chemical and pharmacological studies of the plants from genus Celastrus.

    Science.gov (United States)

    Su, Xiao-Hui; Zhang, Man-Li; Zhan, Wen-Hong; Huo, Chang-Hong; Shi, Qing-Wen; Gu, Yu-Cheng; Kiyota, Hiromasa

    2009-02-01

    The plants of genus Celastrus, distributed in Asia, have been used as natural insecticides and folk medicines to treat fever, chill, joint pain, edema, rheumatoid arthritis, and bacterial infection in China for a long time. This contribution reviews the chemical constituents, isolated from the plants in genus Celastrus in the past few decades, and their biological activities. The compounds listed are sesquiterpenes (beta-agarofurans), diterpenes, triterpenes, alkaloids, and flavonoids.

  8. A study of the genus Trychosis Foerster in Europe (Hymenoptera, Ichneumonidae, Cryptinae)

    NARCIS (Netherlands)

    Rossem, van G.

    1966-01-01

    INTRODUCTION This study was undertaken to prepare keys to the European species of the genus Trychosis Foerster. The older keys by Schmiedeknecht (1890 and 1904-1906), mostly based on Tschek's keys in his study of the genus Cryptus (1870b), do not lead to satisfactory results. This is due to the fact

  9. A study of seed micromorphology in the genus Ophrys (Orchidaceae

    Directory of Open Access Journals (Sweden)

    Galán Cela, Pablo

    2014-12-01

    Full Text Available Seed micromorphology of 19 taxa of the genus Ophrys have been studied using SEM and light microscope. Quantitative data (length and width of seed and embryo, number of testa cells along the longitudinal axis, volume of seed and embryo, and percentage of free air space, as well as qualitative characters (seed shape, features of the anticlinal and periclinal walls, ornamentation and colour were analysed. All the seeds are fusiform, with an asymmetrical basal pole, the periclinal walls of the medial cells have parallel and transverse to slanting ridges, and raised anticlinal walls. Statistical analyses show two large clusters according to the volumes of seed and embryo. Our results support the monophyly of the genus and their recent diversification, however, seed features are not congruent with the recognition of sections and groups within Ophrys.Se ha estudiado la micromorfología de semillas de 19 taxones del género Ophrys mediante el empleo de microscopio óptico y electrónico de barrido. Se han analizado datos cuantitativos (longitud y anchura de la semilla y del embrión, número de células en la testa a lo largo del eje longitudinal, volumen de la semilla y del embrión, y porcentaje de espacio aéreo libre y cualitativos (morfología de la semilla, características de sus paredes anticlinales y periclinales, ornamentación y color. Todas las semillas analizadas son fusiformes, con polo basal asimétrico, ornamentación de las paredes periclinales formada por costillas paralelas y transversales a oblicuas, y paredes anticlinales prominentes. Los análisis estadísticos revelan dos grandes cluster según los valores de los volúmenes de la semilla y el embrión. Nuestros resultados apoyan la monofilia del género y su reciente diversificación, sin embargo, los caracteres micromorfológicos de las semillas no son congruentes con el reconocimiento de secciones y grupos dentro del género Ophrys.

  10. A palynotaxonomic study of the genus Filipendula (Rosaceae)

    Institute of Scientific and Technical Information of China (English)

    Sangtae LEE; Meekyung KANG; Kyeong-In HEO; Wen-Li CHEN; Chunghee LEE

    2009-01-01

    Pollen grains from 15 species (18 taxa) of the genus Filipendula were examined with light and scan-ning electron microscopy. It was revealed that the pollen grains are isopolar, tricolporate, with scabrate or scabrate-microechinate surface. The pollen morphology was compared with the conventional classification sys-tems of the genus by different authors, and supported Shimizu's system (1961), in which the genus was divided into three subgenera. The monotypic subgen. Hypogyna is characterized by pollen lacking fastigium and thickened costae colpi. The other monotypic subgen. Filipendula differs from others by pollen having larger grain, larger pore size, longitudinally elliptic fastigium and thickened costae colpi. The largest subgen. Ulmaria is distinguished by pollen having rounded or latitudinally elliptic fastigium and thickened costae colpi. Sectional classification was not supported by the pollen morphology due to insufficient variability.

  11. Studies in Moraceae III. Additional notes on the genus Clarisia Ruiz et Pavon Emend. Lanj.

    NARCIS (Netherlands)

    Lanjouw, J.; Rossberg, G.

    1936-01-01

    Some months ago the first author published in his Studies in Moraceae II (Rec. trav. bot. néerl. XXXIII, 1936, pp. 254—276) a synopsis of the genus Clarisia R. & P. The second author traced in the Berlin Herbarium a specimen of this genus which had been described in 1821 as Excoecaria ilicifolia

  12. Studies in the family Thelypteridaceae X. The genus Coryphopteris

    NARCIS (Netherlands)

    Holttum, R.E.

    1976-01-01

    All known species of this genus are described, with synonymy for each and a key for identification. Seventeen new species are described: C. andersonii, C. andreae, C. arthrotricha, C. atjehensis, C. athyrioides, C. borealis, C. brevipilosa, C. hubrechtensis, C. iwatsukii, C. kolombangarae, C.

  13. Studies in the family Thelypteridaceae X. The genus Coryphopteris

    NARCIS (Netherlands)

    Holttum, R.E.

    1976-01-01

    All known species of this genus are described, with synonymy for each and a key for identification. Seventeen new species are described: C. andersonii, C. andreae, C. arthrotricha, C. atjehensis, C. athyrioides, C. borealis, C. brevipilosa, C. hubrechtensis, C. iwatsukii, C. kolombangarae, C. meioba

  14. Studies in the family Thelypteridaceae X. The genus Coryphopteris

    NARCIS (Netherlands)

    Holttum, R.E.

    1976-01-01

    All known species of this genus are described, with synonymy for each and a key for identification. Seventeen new species are described: C. andersonii, C. andreae, C. arthrotricha, C. atjehensis, C. athyrioides, C. borealis, C. brevipilosa, C. hubrechtensis, C. iwatsukii, C. kolombangarae, C. meioba

  15. STUDY OF Salmo GENUS (PISCES, SALMONIDAE ON THE BALKAN PENINSULA

    Directory of Open Access Journals (Sweden)

    Simo Georgijev

    2011-03-01

    Full Text Available Author disputes the position of the authors K o t t e l a t (1997 and K o t t e l a t & F r e y h o f (2007 about the existence of several species belonging to the Salmo genus in some parts of Balkan Peninsula: Salmo aphelios Kottelat, 1997; Salmo balcanicus (Karaman, 1927; Salmo farioides (Karaman, 1938; Salmo labrax Pallas, 1814; Salmo letnica (Karaman, 1924; Salmo lumi Poljakov, Filipi & Basho, 1958; Salmo macedonicus (Karaman, 1924; Salmo montenigrinus (Karaman, 1933; Salmo pelagonicus Karaman, 1938; Salmo peristericus Karaman, 1938; Salmo taleri (Karaman, 1932. Majority of those species were described by dr. Stanko Karaman, the author who is, regarding the number of described species of European freshwater fishes, on the second place, just behind Carl Linnaeus. It is hardly believable that four trout species were formed in a small and oligotrophic microhabitat like Ohrid Lake, or three species in the Vardar River, knowing that the factor of geographic isolation doesn’t exist in either of the habitats. The author’s position is that all of these species are actually just types of one, highly plastic regarding the micro ecological conditions and phenotypic manifestations, species: Salmo trutta (Linnaeus, 1785. The author supports his opinion by his own results, as well the results of other scientists, obtained through studies of ecology and taxonomy of the brown trout in fluent and still water microhabitats. Also the author suggests that it is unacceptable to apply the terminology immanent to the anthropogenic factor in a sphere of another scientific area where such factor doesn't exist (agronomy-race and biology-natural selection.

  16. Phytochemicals and biological studies of plants in genus Hedysarum

    Science.gov (United States)

    2013-01-01

    In China, several species (Hedysarum polybotrys Hand.-Mazz., Hedysarum limprichtii Hlbr., Hedysarum vicioider Turcz. var. Taipeicum Hand.-Mazz. Liu, Hedysarum smithianum, et al.) of genus Hedysarum have a long history of use in traditional Chinese medicine (TCM). In TCM, these plants are used to increase the energy of the body. To date, 155 compounds, including flavonoids, triterpenes, coumarins, lignanoids, nitrogen compounds, sterols, carbohydrates, fatty compounds, and benzofuran, have been isolated from plants of the genus Hedysarum. Various chemical constituents contribute to the antioxidant, anti-tumor, anti-aging, anti-diabetic, and anti-hypertensive properties of these plants. Hedysarum species are used to treat infestation with gastrointestinal nematodes and may support the immune system and peripheral nervous system. In the present review, we summarize the research on the phytochemistry and pharmacology of Hedysarum species, which will be useful for better utilization of these important species in TCM. PMID:23866043

  17. Phytochemicals and biological studies of plants in genus Hedysarum

    OpenAIRE

    Dong, Yinmao; Tang, Dongyan; Zhang, Na; Li, Yue; Zhang, Chunhong; Li, Li; Li, Minhui

    2013-01-01

    In China, several species (Hedysarum polybotrys Hand.-Mazz., Hedysarum limprichtii Hlbr., Hedysarum vicioider Turcz. var. Taipeicum Hand.-Mazz. Liu, Hedysarum smithianum, et al.) of genus Hedysarum have a long history of use in traditional Chinese medicine (TCM). In TCM, these plants are used to increase the energy of the body. To date, 155 compounds, including flavonoids, triterpenes, coumarins, lignanoids, nitrogen compounds, sterols, carbohydrates, fatty compounds, and benzofuran, have bee...

  18. Genetic analysis of yield in peanut ( Arachis hypogaea L.) using ...

    African Journals Online (AJOL)

    Genetic analysis of yield in peanut ( Arachis hypogaea L.) using mixed model of ... parent) and a variety Yuhua No.4 (male parent) was used in this research. ... No.4 using the method of major gene plus polygene mixed inheritance model.

  19. Phytochemical and Pharmacological Studies on the Genus Psoralea: A Mini Review

    Directory of Open Access Journals (Sweden)

    Cong-Cong Li

    2016-01-01

    Full Text Available The genus Psoralea, which belongs to the family Fabaceae, comprises ca. 130 species distributed all over the world, and some of the plants are used as folk medicine to treat various diseases. Psoralea corylifolia is a typical example, whose seeds have been widely used in many traditional Chinese medicine formulas for the treatment of various diseases such as leucoderma and other skin diseases, cardiovascular diseases, nephritis, osteoporosis, and cancer. So, the chemical and pharmacological studies on this genus were performed in the past decades. Here, we give a mini review on this genus about its phytochemical and pharmacological studies from 1910 to 2015.

  20. Improving a native pasture with the legume Arachis pintoi in the humid tropics of México

    NARCIS (Netherlands)

    Castillo Gallegos, E.

    2003-01-01

    The objective of this study was to determine the effect of introducing the legume Arachis pintoi CIAT 17434 into a native pasture where native grasses dominated the botanical composition, on establishment, persistence, standing dry matter, botanical composition, soil variables, animal performance, h

  1. Transcriptome Profiling of Wild Arachis from Water-Limited Environments Uncovers Drought Tolerance Candidate Genes.

    Science.gov (United States)

    Brasileiro, Ana C M; Morgante, Carolina V; Araujo, Ana C G; Leal-Bertioli, Soraya C M; Silva, Amanda K; Martins, Andressa C Q; Vinson, Christina C; Santos, Candice M R; Bonfim, Orzenil; Togawa, Roberto C; Saraiva, Mario A P; Bertioli, David J; Guimaraes, Patricia M

    Peanut (Arachis hypogaea L.) is an important legume cultivated mostly in drought-prone areas where its productivity can be limited by water scarcity. The development of more drought-tolerant varieties is, therefore, a priority for peanut breeding programs worldwide. In contrast to cultivated peanut, wild relatives have a broader genetic diversity and constitute a rich source of resistance/tolerance alleles to biotic and abiotic stresses. The present study takes advantage of this diversity to identify drought-responsive genes by analyzing the expression profile of two wild species, Arachis duranensis and Arachis magna (AA and BB genomes, respectively), in response to progressive water deficit in soil. Data analysis from leaves and roots of A. duranensis (454 sequencing) and A. magna (suppression subtractive hybridization (SSH)) stressed and control complementary DNA (cDNA) libraries revealed several differentially expressed genes in silico, and 44 of them were selected for further validation by quantitative RT-PCR (qRT-PCR). This allowed the identification of drought-responsive candidate genes, such as Expansin, Nitrilase, NAC, and bZIP transcription factors, displaying significant levels of differential expression during stress imposition in both species. This is the first report on identification of differentially expressed genes under drought stress and recovery in wild Arachis species. The generated transcriptome data, besides being a valuable resource for gene discovery, will allow the characterization of new alleles and development of molecular markers associated with drought responses in peanut. These together constitute important tools for the peanut breeding program and also contribute to a better comprehension of gene modulation in response to water deficit and rehydration.

  2. Chromosome studies in the genus Pterotricha (Gnaphosidae from Turkey

    Directory of Open Access Journals (Sweden)

    Kumbiçak Zübeyde

    2014-01-01

    Full Text Available The diploid chromosome set and male meiosis of two spider species belonging to the family Gnaphosidae from Turkey are described. Both Pterotricha kochi and Pterotricha lesserti exhibited the diploid chromosome number as 2n♂=22 and X1X20 sex chromosome type. All chromosomes were acrocentric. During the first meiotic division, both species had ten autosomal bivalents and two sex chromosomes that were positively heteropycnotic. At the second meiotic division, two kinds of nuclei were determined, with or without sex chromosome. These data will contribute to our knowledge of the evolution of the genus Pterotricha.

  3. Phylogenetic studies of the genus Cebus (Cebidae-Primates) using chromosome painting and G-banding

    OpenAIRE

    Pissinatti A; De Oliveira EHC; Finotelo LFM; Amaral PJS; Nagamachi CY; Pieczarka JC

    2008-01-01

    Abstract Background Chromosomal painting, using whole chromosome probes from humans and Saguinus oedipus, was used to establish karyotypic divergence among species of the genus Cebus, including C. olivaceus, C. albifrons, C. apella robustus and C. apella paraguayanus. Cytogenetic studies suggested that the species of this genus have conservative karyotypes, with diploid numbers ranging from 2n = 52 to 2n = 54. Results Banding studies revealed morphological divergence among some chromosomes, o...

  4. Review of the Genus Andropogon (Poaceae: Andropogoneae in America Based on Cytogenetic Studies

    Directory of Open Access Journals (Sweden)

    Nicolás Nagahama

    2012-01-01

    Full Text Available Andropogon is a pantropical grass genus comprising 100–120 species and found mainly in the grasslands of Africa and the Americas. In the new world the genus is represented by approximately sixty (diploids or hexaploids species grouped in three sections. The hexaploid condition occurs only in the Americas and the full process of this origin is still uncertain, although cytogenetic analysis coupled with taxonomic evidence have provided strong support for new hypothesis. Stebbins proposed the first hypothesis suggesting that the origin of polyploidy in species of Andropogon in North America resulted from duplication of the genome of some diploid species, and then by intergeneric crosses with species of a related genus. Since then, numerous studies were performed to clarify the evolutionary history of the genus in America. In this paper, we present a review of cytogenetic studies in the American Andropogon species during the last four decades.

  5. Genus-specific primers for study of Fusarium communities in field samples

    OpenAIRE

    2016-01-01

    Fusarium is a large and diverse genus of fungi of great agricultural and economic importance, containing many plant pathogens and mycotoxin producers. To date, high-throughput sequencing of Fusarium communities has been limited by the lack of genus-specific primers targeting regions with high discriminatory power at the species level. In the present study, we evaluated two Fusarium- specific primer pairs targeting translation elongation factor 1 (TEF1). We also present the new primer pair Fa+...

  6. Taxonomic Study of the Genus Abundisporus in Korea.

    Science.gov (United States)

    Jargalmaa, Suldbold; Park, Myung Soo; Park, Jae Young; Fong, Jonathan J; Jang, Yeongseon; Lim, Young Woon

    2015-09-01

    The polypore genus Abundisporus Ryvarden is characterized by resupinate to pileate fruitbodies with a purplish brown hymenophore, slightly thick-walled, pale yellowish and non-dextrinoid basidiospores, and causing white rot. A purple color hymenophore, an easily observable and striking character, was considered the main distinctive feature at the generic level within polypores. However, due to highly similar basidiocarp features, species identification within these purple polypores is particularly difficult. Three species of purple colored polypores have been reported in Korea (Abundisporus fuscopurpureus, A. pubertatis, and Fomitopsis rosea). Based on morphological re-examination, ecological information, and sequence analysis of the internal transcribed spacer, we showed that previous classification was incorrect and there is only one species (A. pubertatis) in Korea. We provide a detailed description of A. pubertatis in Korea, as well as a taxonomic key to distinguish wood rot fungi with a purple hymenophore.

  7. CROMOSOMAS Y EVOLUCION EN ARACHIS (LEGlIMINOSAE

    Directory of Open Access Journals (Sweden)

    Aveliano Fernández

    2010-11-01

    Full Text Available

    Fueron analizadas citológicamente cuarenta y un especies pertenecientes a ocho de las nueve secciones del género Arachis. Se analizaron en detalle los cariotipos veinticuatro de las cuarenta y un especies. Todas las especies tienen un par de cromosomas con satélite, excepto A. valida, que tiene dos pares. Los satélites se clasifican en diez tipos. Las secciones Procumbentes, Erectoides, Extranervosae, Caulorrhizae, Rhizomatosae, Heteranthae y Trierectoides tienen sólo uno o dos tipos de cromosomas con satélite, mientras que la sect. Arachis tiene seis tipos. Un par de cromosomas pequeños se encuentran en la sect. Arachis, excepto en A.batizocoi, A. ipaensis, A. glandulifera, A. magna y A. benensis. A. glandulifera (sect. Arachis tiene el cariotipo más asimétrico, con seis pares de cromosomas subtelocéntricos y A.guaranitica (sect. Trierectoides tiene el cariotipo más simétrico. Esto apoya la hipótesis de que la sect. Trierectoides es la más antigua en el género y la sect. Arachis tiene un origen más reciente. Teniendo en cuenta los cariotipos, morfología externa y la distribución geográfica, A. duranensis y A. ipaensis son probablemente los donantes del genoma de A.hypogaea.

  8. Chemical review and studies related to species from the genus Tynanthus (Bignoniaceae

    Directory of Open Access Journals (Sweden)

    Fernanda Colombi Cansian

    2015-09-01

    Full Text Available Species from the Bignoniaceae Family, including the genus Tynanthus, are very prevalent in the tropical Americas, with specimens found in a large part of the Brazilian territory. These plants are commonly used in traditional medicine for several purposes, and some studies have described their chemical structure, in addition to other reports related to some species from this genus. This review aimed to gather information from published works concerning species of the genus Tynanthus, as well as to detect flaws in research related to these plants, which may have great biological and pharmaceutical importance. Also, this review points out some common chemical characteristics of these species, providing information that may help new researchers to improve their knowledge about these plants.

  9. Nutritional composition of new peanut (Arachis hypogaea L.) cultivars

    Energy Technology Data Exchange (ETDEWEB)

    Campos-Mondragon, M. G.; Calderon de la Barca, A. M.; Duran-Prado, A.; Campos-Reyes, L. C.; Oliart-Ros, R. M.; Ortega-Garcia, J.; Medina-Juarez, L. A.; Angulo, O.

    2009-07-01

    Six peanut (Arachis hypogaea L.) cultivars (Col-24-Gro, Col-61-Gto, VA-81-B, Ranferi Diaz, NC-2 and Florunner) were studied for agricultural yield, chemical composition (protein, fat, carbohydrates, fiber and ash), amino acid profile, digestibility, fatty acid profile, tocopherol and sterol contents. Results indicated that Ranferi Diaz and Col-61-Gto presented the highest yield (6.3 Ton/ha). Protein content was from 23.5 to 26.6% and fat content ranged from 49.8-53.4%. Mean digestibility was 86%. Lysine and threonine levels in all cultivars were sufficient to meet human requirements. Total saturated fatty acids ranged from 15-18%. The oleic/linoleic ratio was estimated 1.3-1.4. Tocopherol levels varied from 390 to 706 ppm. The highest tocopherol levels corresponded to the cultivars with the lowest yield. The alpha tocopherol content was estimated at 90-150 ppm, while gamma tocopherol was 270-570 ppm. The main sterol present was A- sitosterol (approx. 65%). Ranferi Diaz variety presented the highest agronomic yield and the highest protein content but low oleic acid, low sterols and low total tocopherols. The differences among cultivars suggest differences in their applications. (Author) 40 refs.

  10. Genome re-assignment of Arachis trinitensis (Sect. Arachis, Leguminosae and its implications for the genetic origin of cultivated peanut

    Directory of Open Access Journals (Sweden)

    Germán Robledo

    2010-01-01

    Full Text Available The karyotype structure of Arachis trinitensis was studied by conventional Feulgen staining, CMA/DAPI banding and rDNA loci detection by fluorescence in situ hybridization (FISH in order to establish its genome status and test the hypothesis that this species is a genome donor of cultivated peanut. Conventional staining revealed that the karyotype lacked the small "A chromosomes" characteristic of the A genome. In agreement with this, chromosomal banding showed that none of the chromosomes had the large centromeric bands expected for A chromosomes. FISH revealed one pair each of 5S and 45S rDNA loci, located in different medium-sized metacentric chromosomes. Collectively, these results suggest that A. trinitensis should be removed from the A genome and be considered as a B or non-A genome species. The pattern of heterochromatic bands and rDNA loci of A. trinitensis differ markedly from any of the complements of A. hypogaea, suggesting that the former species is unlikely to be one of the wild diploid progenitors of the latter.

  11. Aplicação de biofungicidas no controle do fungo Aspergillus flavus L. em amendoim (Arachis hypogaea)

    OpenAIRE

    Gorayeb, Teresa Cristina Castilho [UNESP

    2015-01-01

    This study aims to evaluate the technical feasibility of the application of biofungicides extracted from plants in the processing of peanut (Arachis hypogaea L.), with the objective of reducing infestation by fungus Aspergillus flavus L., and consequent contamination by aflatoxin, a chemical hazard. Firstly, we studied the fungal and aflatoxin contamination for the 2011/12, 2012/13, and 2013/14 crops, during the Runner IAC 886 peanut pods' harvesting and post-harvesting stages, in the region ...

  12. The genus Bipolaris

    NARCIS (Netherlands)

    Manamgoda, D.S.; Rossman, A.Y.; Castlebury, L.A.; Crous, P.W.; Madrid, H.; Chukeatirote, E.; Hyde, K.D.

    2014-01-01

    The genus Bipolaris includes important plant pathogens with worldwide distribution. Species recognition in the genus has been uncertain due to the lack of molecular data from ex-type cultures as well as overlapping morphological characteristics. In this study, we revise the genus Bipolaris based on

  13. Crystal structure of peanut (Arachis hypogaea) allergen Ara h 5

    Science.gov (United States)

    Profilins from numerous species are known to be allergens, including food allergens, such as peanut (Arachis hypogaea) allergen Ara h 5, and pollen allergens, such as birch allergen Bet v 2. Patients with pollen allergy can also cross-react to peanut. Structural characterization of allergens will al...

  14. Hairy root induction from hypocotyl segments of groundnut (Arachis ...

    African Journals Online (AJOL)

    SERVER

    2007-08-06

    Aug 6, 2007 ... (Arachis hypogaea L.) is a popular and important food legume known for its high protein and oil content (Cheng et al., 1992). It has a high .... and Benzylamino purine on the regeneration potentiality in cotyledonary explants of ...

  15. A review on phytochemical, ethnomedical and pharmacological studies on genus Sophora, Fabaceae

    Directory of Open Access Journals (Sweden)

    Panthati Murali Krishna

    2012-10-01

    Full Text Available Sophora is a genus of the Fabaceae family, contains about 52 species, nineteen varieties, and seven forms that are widely distributed in Asia, Oceanica, and the Pacific islands, in the family Fabaceae of herbaceous (Sophora flavescens Aiton to trees (Sophora japonica L.. More than fifteen species in this genus have a long history of use in traditional Chinese medicines. In the last decades the use of this genus in traditional Chinese drugs has led to rapid increase in the information available on active components and reported to posses various pharmacological/therapeutic properties. The paper reviews the ethnopharmacology, the biological activities and the correlated chemical compounds of genus Sophora, Fabaceae. More than 300 compounds has been isolated, among them major are quinolizidine alkaloids particularly matrine and oxymatrine and flavonoids particularly prenylated and isoprenylated flavonoids. Modern pharmacological studies and clinical studies demonstrated that these chemical constituens possess wide reaching pharmacological actions like anti oxidant, anticancer, anti-asthamatic, anti-neoplastic, antimicrobial, antiviral, antidote, anti pyretic, cardiotonic, antinflammatory, diuretic and in the treatment of skin diseases like eczema, colitis and psoriasis.

  16. Forage yield and nutritive value of Arachis spp. genotypes in the Brazilian savanna

    Directory of Open Access Journals (Sweden)

    Francisco D. Fernandes

    2017-01-01

    Full Text Available Forage yield, nutritive value, ground cover and mineral concentration of 10 genotypes of Arachis spp. were evaluated over 3 years in Planaltina, Federal District, Brazil. Experimental plots were arranged in a randomized complete block design with 4 replications. Treatments were 5 genotypes of A. pintoi (accessions 2, 4, 5, 6 and 8, 2 genotypes of A. repens (accessions 1 and 7, 1 hybrid A. pintoi × A. repens (accession 3 and 2 A. pintoi cultivars, BRS Mandobi and Belmonte. All genotypes established well and achieved good ground cover in the first year. Cultivar Belmonte and accessions 2 and 4 produced the highest DM yields (means of 8.8, 8.5 and 8.8 t DM/ha/yr, respectively throughout, while cv. BRS Mandobi and accession 6 were the worst (5.7 and 5.6 t DM/ha/yr. Most genotypes maintained ground cover above 80% throughout the study but cv. BRS Mandobi plus accessions 6 and 8 had declined to 60% or less by the third year. Mean crude protein concentration overall was 166 g/kg with a range of 154‒182 g/kg among genotypes. There was no major genotypic variation in mineral concentrations, which in all cases were considered marginal to adequate for tropical forage legumes. In conclusion, genotypes 2 and 4 (accessions BRA-039799 and BRA-039187, respectively of A. pintoi are considered the most promising forage peanut options under the edaphoclimatic conditions of the experimental site. More effort is needed to improve seed set in these accessions to increase adoption by farmers. Their persistence under grazing and impact on production should also be demonstrated. Keywords: Arachis pintoi, Arachis repens, crude protein, digestibility, minerals.

  17. Preliminary studies in the genus Entoloma in Tasmania - I

    OpenAIRE

    Gates, Genevieve M.; Noordeloos, Machiel

    2007-01-01

    This paper describes 33 new species of Entoloma from wet and dry forests in Tasmania, Australia, based on 8 years of intensive collecting, description and study of the Entoloma mycota. As such it is a precursor to a monographic treatment of the Entolomataceae of Tasmania, to be published in the next few years.

  18. Preliminary studies in the genus Entoloma in Tasmania - I

    NARCIS (Netherlands)

    Gates, Genevieve M.; Noordeloos, Machiel

    2007-01-01

    This paper describes 33 new species of Entoloma from wet and dry forests in Tasmania, Australia, based on 8 years of intensive collecting, description and study of the Entoloma mycota. As such it is a precursor to a monographic treatment of the Entolomataceae of Tasmania, to be published in the next

  19. Pollen Grain and Hybridization Studies in the Genus Capsicum

    Directory of Open Access Journals (Sweden)

    Tomi Lois OLATUNJI

    2016-03-01

    Full Text Available The current study aimed to evaluate the pollen viability of the commonly cultivated varieties of Capsicum species and assessed the potentials for gene exchange among the genotypes through hybridization studies. Capsicum annuum var. abbreviatum, C. annuum var. acuminatum, C. annuum var. grossum and C. frutescens var. baccatum were the species and varieties used in this study. The present findings indicated that the percentage of pollen viability varied in the studied Capsicum genotypes. The highest pollen viability was obtained in C. annuum var. abbreviatum (96.3%, followed by C. annuum var. grossum (95%, and C. annuum var. acuminatum (91.1%. The lowest pollen viability was recorded in C. frutescens var. baccatum (86.2%. The pollen viability was high in most varieties indicating that meiosis is normal, resulting in viable pollen grains. Several intraspecific and interspecific crosses were performed among the Capsicum genotypes and three putative hybrid fruits were produced. Percentage successes obtained in the crosses were low and comparable in both intra and inter-specific crosses. In the entire crosses pattern, pollination success of 10% was recorded for C. frutescens var. baccatum and C. annuum var. acuminatum. Knowing the nature and viability of pollen grains may help in predicting the success rate of hybridization and the successful crosses between C. frutescens var. baccatum and C. annuum var. acuminatum suggest that these two varieties are the closest genetically.

  20. Rhizobium pakistanensis sp. nov., isolated from groundnut (Arachis hypogaea) nodules grown in rainfed Pothwar, Pakistan.

    Science.gov (United States)

    Khalid, Rabia; Zhang, Yu Jing; Ali, Safdar; Sui, Xin Hua; Zhang, Xiao Xia; Amara, Ummay; Chen, Wen Xin; Hayat, Rifat

    2015-01-01

    A Gram-negative, white, non-motile, rod shaped bacterial strain BN-19(T) was isolated from a root nodule of groundnut (Arachis hypogaea) in Pakistan. Phylogenetic analysis based on 16S rRNA gene sequence revealed that strain BN-19(T) formed a subclade in the genus Rhizobium together with Rhizobium alkalisoli CCBAU 01393(T), Rhizobium vignae CCBAU 05176(T), Rhizobium huautlense SO2(T) and Rhizobium tarimense PL-41(T) with sequence similarities of 97.5, 97.3, 97.2 and 97.1 % respectively. Sequence analysis of housekeeping genes atpD, glnII and recA (with sequence similarities of ≤92 %) confirmed the unique position of BN-19(T) in the genus Rhizobium. DNA-DNA relatedness between the strain BN-19(T) and R. alkalisoli CCBAU 01393(T), R. vignae CCBAU 05176(T), R. huautlense SO2(T) and R. tarimense PL-41(T) were 20.6, 22.5, 15.9 and 20.5 % respectively, further confirming that BN-19(T) represents a novel species in the genus Rhizobium. The DNA G + C content was 60.1 mol%. The dominant fatty acids of strain BN-19(T) were C19:0 cyclo ω8c, summed feature 2 (C14:0 3OH and/or C16:1 iso I) and summed feature 8 (C18:1 ω7c). Some phenotypic features also differentiate the strain BN-19(T) from the related species. On the basis of these results, strain BN-19(T) is considered to represent a novel species in the genus Rhizobium, for which the name Rhizobium pakistanensis sp. nov. is proposed. The type strain is BN-19(T) (=LMG 27895(T) = CCBAU 101086(T)).

  1. Genetic Mapping of Resistance to Meloidogyne arenaria in Arachis stenosperma: A New Source of Nematode Resistance for Peanut

    Science.gov (United States)

    Leal-Bertioli, Soraya C. M.; Moretzsohn, Márcio C.; Roberts, Philip A.; Ballén-Taborda, Carolina; Borba, Tereza C. O.; Valdisser, Paula A.; Vianello, Rosana P.; Araújo, Ana Cláudia G; Guimarães, Patricia M.; Bertioli, David J.

    2015-01-01

    Root-knot nematodes (RKN; Meloidogyne sp.) are a major threat to crops in tropical and subtropical regions worldwide. The use of resistant crop varieties is the preferred method of control because nematicides are expensive, and hazardous to humans and the environment. Peanut (Arachis hypogaea) is infected by four species of RKN, the most damaging being M. arenaria, and commercial cultivars rely on a single source of resistance. In this study, we genetically characterize RKN resistance of the wild Arachis species A. stenosperma using a population of 93 recombinant inbred lines developed from a cross between A. duranensis and A. stenosperma. Four quantitative trait loci (QTL) located on linkage groups 02, 04, and 09 strongly influenced nematode root galling and egg production. Drought-related, domestication and agronomically relevant traits were also evaluated, revealing several QTL. Using the newly available Arachis genome sequence, easy-to-use KASP (kompetitive allele specific PCR) markers linked to the newly identified RKN resistance loci were developed and validated in a tetraploid context. Therefore, we consider that A. stenosperma has high potential as a new source of RKN resistance in peanut breeding programs. PMID:26656152

  2. Genetic Mapping of Resistance to Meloidogyne arenaria in Arachis stenosperma: A New Source of Nematode Resistance for Peanut

    Directory of Open Access Journals (Sweden)

    Soraya C. M. Leal-Bertioli

    2016-02-01

    Full Text Available Root-knot nematodes (RKN; Meloidogyne sp. are a major threat to crops in tropical and subtropical regions worldwide. The use of resistant crop varieties is the preferred method of control because nematicides are expensive, and hazardous to humans and the environment. Peanut (Arachis hypogaea is infected by four species of RKN, the most damaging being M. arenaria, and commercial cultivars rely on a single source of resistance. In this study, we genetically characterize RKN resistance of the wild Arachis species A. stenosperma using a population of 93 recombinant inbred lines developed from a cross between A. duranensis and A. stenosperma. Four quantitative trait loci (QTL located on linkage groups 02, 04, and 09 strongly influenced nematode root galling and egg production. Drought-related, domestication and agronomically relevant traits were also evaluated, revealing several QTL. Using the newly available Arachis genome sequence, easy-to-use KASP (kompetitive allele specific PCR markers linked to the newly identified RKN resistance loci were developed and validated in a tetraploid context. Therefore, we consider that A. stenosperma has high potential as a new source of RKN resistance in peanut breeding programs.

  3. Nutritional composition of new Peanut (Arachis hypogaea L. cultivars

    Directory of Open Access Journals (Sweden)

    2009-06-01

    Full Text Available Six peanut (Arachis hypogaea L. cultivars (Col-24-Gro, Col-61-Gto, VA-81-B, Ranferi Díaz, NC-2 and Florunner were studied for agricultural yield, chemical composition (protein, fat, carbohydrates, fiber and ash, amino acid profile, digestibility, fatty acid profile, tocopherol and sterol contents. Results indicated that Ranferi Díaz and Col-61-Gto presented the highest yield (6.3 Ton/ha. Protein content was from 23.5 to 26.6% and fat content ranged from 49.8-53.4%. Mean digestibility was 86%. Lysine and threonine levels in all cultivars were sufficient to meet human requirements. Total saturated fatty acids ranged from 15-18%. The oleic/linoleic ratio was estimated 1.3-1.4. Tocopherol levels varied from 390 to 706 ppm. The highest tocopherol levels corresponded to the cultivars with the lowest yield. The alpha tocopherol content was estimated at 90-150 ppm, while gamma tocopherol was 270-570 ppm.The main sterol present was βsitosterol (approx. 65%. Ranferi Diaz variety presented the highest agronomic yield and the highest protein content but low oleic acid, low sterols and low total tocopherols. The differences among cultivars suggest differences in their applications.

    Se estudio el rendimiento agrícola y composición química (proteína, grasa, carbohidratos, fibra y cenizas, perfil de amino ácidos, digestibilidad, perfil de ácidos grasos, contenido de tocoferol y de esteroles de seis variedades de cacahuate (Arachis hypogaea L. Col-24-Gro, Col-61-Gto, VA-81B, Ranferi Díaz, NC-2 y Florunner. Los resultados mostraron que el mayor rendimiento se logró en las variedades Ranferi Díaz y Col-61-Gto (6.3 Ton/ha. El contenido de proteína fue de 23.5 a 26.6% y el contenido de grasa en un intervalo de 49.8 a 53.4%. La digestibilidad promedio de las seis variedades fue de 86%. El contenido de lisina y treonina en la proteína de todas las variedades fue suficiente para satisfacer los requerimientos del humano. La composición del aceite

  4. Origin of triploid Arachis pintoi (Leguminosae) by autopolyploidy evidenced by FISH and meiotic behaviour

    Science.gov (United States)

    Lavia, Graciela Inés; Ortiz, Alejandra Marcela; Robledo, Germán; Fernández, Aveliano; Seijo, Guillermo

    2011-01-01

    Background and Aims Polyploidy is a dominant feature of flowering-plant genomes, including those of many important crop species. Arachis is a largely diploid genus with just four polyploid species. Two of them are economically important: the cultivated peanut and A. glabrata, a tropical forage crop. Even though it is usually accepted that polyploids within papilionoid legumes have arisen via hybridization and further chromosome doubling, it has been recently suggested that peanut arose through bilateral sexual polyploidization. In this paper, the polyploid nature of the recent, spontaneously originated triploid cytotype of the tropical lucerne, A. pintoi, was analysed, and thereby the mechanism by which polyploids may arise in the genus. Methods Chromosome morphology of 2x and 3x A. pintoi was determined by the Feulgeńs technique and the rDNA sites were mapped by FISH. To investigate whether polyploidization occurred by means of unreduced gametes, a detailed analysis of the microsporogenesis and pollen grains was made. Key Results The 2x and 3x plants presented 9m + 1sm and a satellited chromosome type 2 in each haploid genome. Physical mapping revealed a cluster of 18S–26S rDNA, proximally located on chromosome 6, and two 5S rDNA loci on chromosomes 3 and 5. Diploid plants presented 10II in meiosis while trivalents were observed in all triploids, with a maximum of 10III by cell. Diploid A. pintoi produced normal tetrads, but also triads, dyads and monads. Two types of pollen grains were detected: (1) normal-sized with a prolate shape and (2) large ones with a tetrahedral morphology. Conclusions Karyotype and meiotic analysis demonstrate that the 3x clone of A. pintoi arose by autopolyploidy. The occurrence of unreduced gametes strongly supports unilateral sexual polyploidization as the most probable mechanism that could have led to the origin of the triploid cytotype. This mechanism of polyploidization would probably be one of the most important mechanisms

  5. Phylogenetic studies of the genus Cebus (Cebidae-Primates using chromosome painting and G-banding

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    Pissinatti A

    2008-06-01

    Full Text Available Abstract Background Chromosomal painting, using whole chromosome probes from humans and Saguinus oedipus, was used to establish karyotypic divergence among species of the genus Cebus, including C. olivaceus, C. albifrons, C. apella robustus and C. apella paraguayanus. Cytogenetic studies suggested that the species of this genus have conservative karyotypes, with diploid numbers ranging from 2n = 52 to 2n = 54. Results Banding studies revealed morphological divergence among some chromosomes, owing to variations in the size of heterochromatic blocks. This analysis demonstrated that Cebus species have five conserved human associations (i.e., 5/7, 2/16, 10/16, 14/15, 8/18 and 3/21 when compared with the putative ancestral Platyrrhini karyotype. Conclusion The autapomorphies 8/15/8 in C. albifrons and 12/15 in C. olivaceus explain the changes in chromosome number from 54 to 52. The association 5/16/7, which has not previously been reported in Platyrrhini, was also found in C. olivaceus. These data corroborate previous FISH results, suggesting that the genus Cebus has a very similar karyotype to the putative ancestral Platyrrhini.

  6. Phylogenetic studies of the genus Cebus (Cebidae-Primates) using chromosome painting and G-banding.

    Science.gov (United States)

    Amaral, P J S; Finotelo, L F M; De Oliveira, E H C; Pissinatti, A; Nagamachi, C Y; Pieczarka, J C

    2008-06-05

    Chromosomal painting, using whole chromosome probes from humans and Saguinus oedipus, was used to establish karyotypic divergence among species of the genus Cebus, including C. olivaceus, C. albifrons, C. apella robustus and C. apella paraguayanus. Cytogenetic studies suggested that the species of this genus have conservative karyotypes, with diploid numbers ranging from 2n = 52 to 2n = 54. Banding studies revealed morphological divergence among some chromosomes, owing to variations in the size of heterochromatic blocks. This analysis demonstrated that Cebus species have five conserved human associations (i.e., 5/7, 2/16, 10/16, 14/15, 8/18 and 3/21) when compared with the putative ancestral Platyrrhini karyotype. The autapomorphies 8/15/8 in C. albifrons and 12/15 in C. olivaceus explain the changes in chromosome number from 54 to 52. The association 5/16/7, which has not previously been reported in Platyrrhini, was also found in C. olivaceus. These data corroborate previous FISH results, suggesting that the genus Cebus has a very similar karyotype to the putative ancestral Platyrrhini.

  7. The Genus Patrinia: A Review of Traditional Uses, Phytochemical and Pharmacological Studies.

    Science.gov (United States)

    He, Xirui; Luan, Fei; Zhao, Zefeng; Ning, Ning; Li, Maoxing; Jin, Ling; Chang, Yu; Zhang, Qiang; Wu, Ni; Huang, Linhong

    2017-01-01

    The aim of the present review is to comprehensively outline the botanical description, traditional uses, phytochemistry, pharmacology and toxicology of Patrinia, and to discuss possible trends for the further study of medicinal plants from the genus Patrinia. The genus Patrinia plays an important role in Asian medicine for the treatment of erysipelas, conjunctival congestion with swelling and pain, peri-appendicular abscesses, lung carbuncle, dysentery, leucorrhea, and postpartum disease. More than 210 chemical constituents have been isolated and identified from Patrinia plants, especially P. scabiosaefolia Fisch., P. scabra Bunge, P. villosa Juss., P. heterophylla Bunge and P. rupestris(Pall.) Juss[Formula: see text] Of these compounds, triterpenoids and saponins, iridoids, flavonoids, and lignans are the major or active constituents. Both in vitro and in vivo studies have indicated that some monomer compounds and crude extracts from the genus Patrinia possess wide pharmacological activities, including antitumor, anti-inflammatory, antibacterial, and antiviral effects. In addition, they have been shown to have valuable and positive effects on the immune and nervous system in experimental animals. There are also some reports on the clinical uses and toxicity of these species. However, few reports have been published concerning the material identification or quality control of Patrinia species, and the clinical uses and toxic effects of these plants are relatively sparse. More attention must be given to these issues.

  8. Genome-Wide Dissection of the Heat Shock Transcription Factor Family Genes in Arachis.

    Science.gov (United States)

    Wang, Pengfei; Song, Hui; Li, Changsheng; Li, Pengcheng; Li, Aiqin; Guan, Hongshan; Hou, Lei; Wang, Xingjun

    2017-01-01

    Heat shock transcription factors (Hsfs) are important transcription factors (TFs) in protecting plants from damages caused by various stresses. The released whole genome sequences of wild peanuts make it possible for genome-wide analysis of Hsfs in peanut. In this study, a total of 16 and 17 Hsf genes were identified from Arachis duranensis and A. ipaensis, respectively. We identified 16 orthologous Hsf gene pairs in both peanut species; however HsfXs was only identified from A. ipaensis. Orthologous pairs between two wild peanut species were highly syntenic. Based on phylogenetic relationship, peanut Hsfs were divided into groups A, B, and C. Selection pressure analysis showed that group B Hsf genes mainly underwent positive selection and group A Hsfs were affected by purifying selection. Small scale segmental and tandem duplication may play important roles in the evolution of these genes. Cis-elements, such as ABRE, DRE, and HSE, were found in the promoters of most Arachis Hsf genes. Five AdHsfs and two AiHsfs contained fungal elicitor responsive elements suggesting their involvement in response to fungi infection. These genes were differentially expressed in cultivated peanut under abiotic stress and Aspergillus flavus infection. AhHsf2 and AhHsf14 were significantly up-regulated after inoculation with A. flavus suggesting their possible role in fungal resistance.

  9. Construction of Genetic Linkage Map Based on SSR Markers in Peanut(Arachis hypogaea L.)

    Institute of Scientific and Technical Information of China (English)

    2008-01-01

    Molecular genetic maps of crop species can be used in a variety of ways in breeding and genomic research such as identification and mapping of genes and quantitative trait loci (QTLs) for morphological, physiological and economic traits of crop species. However, a comprehensive genetic linkage map for cultivated peanut has not yet been developed due to the extremely low frequency of DNA polymorphism in cultivated peanut. In this study, 142 recombinant inbred lines (RILs) derived from a cross between Yueyou 13 and Zhenzhuhei were used as mapping population in peanut (Arachis hypogaea L.). A total 652 pairs of genomic-SSR primer and 392 pairs of EST-SSR primer were used to detect the polymorphisms between the two parents. 141 SSR primer pairs, 127 genomic-SSR and 14 EST-SSR ones, which can be used to detect polymorphisms between the two parents, were selected to analyze the RILs population. Thus, a linkage genetic map which consists of 131 SSR loci in 20 linkage groups, with a coverage of 679 cM and an average of 6.12 cM of inter-maker distance was constructed. The putative functions of 12 EST-SSR markers located on the map were analyzed. Eleven showed homology to gene sequences deposited in GenBank. This is the first report of construction of a comprehensive genetic map with SSR markers in peanut (Arachis hypogaea L.). The map presented here will provide a genetic framework for mapping the qualitative and quantitative trait in peanut.

  10. Taxonomic study of the genus Salinicola: transfer of Halomonas salaria and Chromohalobacter salarius to the genus Salinicola as Salinicola salarius comb. nov. and Salinicola halophilus nom. nov., respectively.

    Science.gov (United States)

    de la Haba, Rafael R; Sánchez-Porro, Cristina; Márquez, M Carmen; Ventosa, Antonio

    2010-04-01

    We have carried out a polyphasic taxonomic characterization of the type strains of the species with the recently validated name Salinicola socius, together with two species that were phylogenetically closely related, Halomonas salaria and Chromohalobacter salarius. 16S rRNA gene sequence analyses showed that they constituted a coherent cluster, with sequence similarities between 98.7 and 97.7 %. We have determined the almost complete 23S rRNA gene sequences of these three type strains, and the percentage of similarity between them was 99.2-97.6 %. Phylogenetic trees based on the 16S rRNA and 23S rRNA gene sequences, obtained by using three different algorithms, were consistent and showed that these three species constituted a cluster separated from the other species of the genera of the family Halomonadaceae, supporting their placement in a single genus. All three species have ubiquinone 9 as the major respiratory quinone, and showed similar fatty acid and polar lipid profiles. The level of DNA-DNA hybridization between Salinicola socius DSM 19940(T), Halomonas salaria DSM 18044(T) and Chromohalobacter salarius CECT 5903(T) was 41-21 %, indicating that they are different species of the genus Salinicola. A comparative phenotypic study of these strains following the proposed minimal standards for describing new taxa of the family Halomonadaceae has been carried out. The phenotypic data are consistent with the placement of these three species in a single genus and support their differentiation at the species level. On the basis of these data we have emended the description of the species Salinicola socius and we propose to transfer the species Halomonas salaria and Chromohalobacter salarius to the genus Salinicola, as Salinicola salarius comb. nov. (type strain M27(T) =KCTC 12664(T) =DSM 18044(T)) and Salinicola halophilus nom. nov. (type strain CG4.1(T) =CECT 5903(T) =LMG 23626(T)), respectively.

  11. Are ribosomal DNA clusters rearrangement hotspots? A case study in the genus Mus (Rodentia, Muridae

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    Douzery Emmanuel JP

    2011-05-01

    Full Text Available Abstract Background Recent advances in comparative genomics have considerably improved our knowledge of the evolution of mammalian karyotype architecture. One of the breakthroughs was the preferential localization of evolutionary breakpoints in regions enriched in repetitive sequences (segmental duplications, telomeres and centromeres. In this context, we investigated the contribution of ribosomal genes to genome reshuffling since they are generally located in pericentromeric or subtelomeric regions, and form repeat clusters on different chromosomes. The target model was the genus Mus which exhibits a high rate of karyotypic change, a large fraction of which involves centromeres. Results The chromosomal distribution of rDNA clusters was determined by in situ hybridization of mouse probes in 19 species. Using a molecular-based reference tree, the phylogenetic distribution of clusters within the genus was reconstructed, and the temporal association between rDNA clusters, breakpoints and centromeres was tested by maximum likelihood analyses. Our results highlighted the following features of rDNA cluster dynamics in the genus Mus: i rDNA clusters showed extensive diversity in number between species and an almost exclusive pericentromeric location, ii a strong association between rDNA sites and centromeres was retrieved which may be related to their shared constraint of concerted evolution, iii 24% of the observed breakpoints mapped near an rDNA cluster, and iv a substantial rate of rDNA cluster change (insertion, deletion also occurred in the absence of chromosomal rearrangements. Conclusions This study on the dynamics of rDNA clusters within the genus Mus has revealed a strong evolutionary relationship between rDNA clusters and centromeres. Both of these genomic structures coincide with breakpoints in the genus Mus, suggesting that the accumulation of a large number of repeats in the centromeric region may contribute to the high level of chromosome

  12. GC-MS studies of the chemical composition of two inedible mushrooms of the genus Agaricus

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    Gjosheva Melania

    2007-12-01

    Full Text Available Abstract Background Mushrooms in the genus Agaricus have worldwide distribution and include the economically important species A. bisporus. Some Agaricus species are inedible, including A. placomyces and A. pseudopratensis, which are similar in appearance to certain edible species, yet are known to possess unpleasant odours and induce gastrointestinal problems if consumed. We have studied the chemical composition of these mushrooms using GC-MS. Results Our GC-MS studies on the volatile fractions and butanol extracts resulted in the identification of 44 and 34 compounds for A. placomyces and A. pseudopratensis, respectively, including fatty acids and their esters, amino acids, and sugar alcohols. The most abundant constituent in the volatiles and butanol were phenol and urea respectively. We also identified the presence of ergosterol and two Δ7-sterols. In addition, 5α,8α-Epidioxi-24(ξ-methylcholesta-6,22-diene-3β-ol was isolated for the first time from both mushrooms. Our study is therefore the first report on the chemical composition of these two species. Conclusion The results obtained contribute to the knowledge of the chemical composition of mushrooms belonging to the Agaricus genus, and provide some explanation for the reported mild toxicity of A. placomyces and A. pseudopratensis, a phenonomenon that can be explained by a high phenol content, similar to that found in other Xanthodermatei species.

  13. Genus-Specific Primers for Study of Fusarium Communities in Field Samples.

    Science.gov (United States)

    Karlsson, Ida; Edel-Hermann, Véronique; Gautheron, Nadine; Durling, Mikael Brandström; Kolseth, Anna-Karin; Steinberg, Christian; Persson, Paula; Friberg, Hanna

    2015-10-30

    Fusarium is a large and diverse genus of fungi of great agricultural and economic importance, containing many plant pathogens and mycotoxin producers. To date, high-throughput sequencing of Fusarium communities has been limited by the lack of genus-specific primers targeting regions with high discriminatory power at the species level. In the present study, we evaluated two Fusarium-specific primer pairs targeting translation elongation factor 1 (TEF1). We also present the new primer pair Fa+7/Ra+6. Mock Fusarium communities reflecting phylogenetic diversity were used to evaluate the accuracy of the primers in reflecting the relative abundance of the species. TEF1 amplicons were subjected to 454 high-throughput sequencing to characterize Fusarium communities. Field samples from soil and wheat kernels were included to test the method on more-complex material. For kernel samples, a single PCR was sufficient, while for soil samples, nested PCR was necessary. The newly developed primer pairs Fa+7/Ra+6 and Fa/Ra accurately reflected Fusarium species composition in mock DNA communities. In field samples, 47 Fusarium operational taxonomic units were identified, with the highest Fusarium diversity in soil. The Fusarium community in soil was dominated by members of the Fusarium incarnatum-Fusarium equiseti species complex, contradicting findings in previous studies. The method was successfully applied to analyze Fusarium communities in soil and plant material and can facilitate further studies of Fusarium ecology.

  14. Studies on Leaf Venation in Selected Taxa of the Genus Ficus L. (Moraceae) in Peninsular Malaysia.

    Science.gov (United States)

    Badron, Ummu Hani; Talip, Noraini; Mohamad, Abdul Latiff; Affenddi, Affina Eliya Aznal; Juhari, Amirul Aiman Ahmad

    2014-12-01

    A study on the variation of leaf venation patterns was conducted on 21 taxa of the genus Ficus in Peninsular Malaysia. The results showed the existence of eight leaf venation patterns based on veinlets, the ultimate marginal and areolar venation. The majority of species, such as F. annulata, F. benghalensis, F. benjamina, F. deltoidea var. angustifolia, F. deltoidea var. kunstleri, F. depressa, F. elastica, F. hispida, F. microcarpa, F. religiosa, F. tinctoria, F. ucinata and F. vasculosa, show tri-veinlets. The others exhibit the following: bi-veinlets in F. aurata and F. heteropleura; uni-veinlets in F. lepicarpa, F. schwarzii and F. superba; and simple veinlets in F. aurantiacea and F. fulva. F. sagittata presents no veinlets for areolar venation. The presence of tracheid or swollen veins at the centre of the lamina and the presence of cystolith cells and trichomes are common anatomical characteristics that could assist in group classification of the studied species. Variations in leaf venation patterns are not only valuable in identifying a taxon group, but can also be used to differentiate between species in the genus Ficus.

  15. The genus Idertia (Ochnaceae)

    NARCIS (Netherlands)

    Sosef, M.S.M.

    2013-01-01

    Background and aims - The genus Idertia belongs to the subfamily Ochnoideae, tribe Ochneae, subtribe Ouratinae. This paper aims at a full taxonomic revision and a critical evaluation of the taxonomic position of the genus along with its diagnostic characters. Methods - All characters are studied usi

  16. Translation Initiation Factor eIF4E and eIFiso4E Are Both Required for Peanut stripe virus Infection in Peanut (Arachis hypogaea L.)

    Science.gov (United States)

    Xu, Manlin; Xie, Hongfeng; Wu, Juxiang; Xie, Lianhui; Yang, Jinguang; Chi, Yucheng

    2017-01-01

    Peanut stripe virus (PStV) belongs to the genus Potyvirus and is the most important viral pathogen of cultivated peanut (Arachis hypogaea L.). The eukaryotic translation initiation factor, eIF4E, and its isoform, eIF(iso)4E, play key roles during virus infection in plants, particularly Potyvirus. In the present study, we cloned the eIF4E and eIF(iso)4E homologs in peanut and named these as PeaeIF4E and PeaeIF(iso)4E, respectively. Quantitative real-time PCR (qRT-PCR) analysis showed that these two genes were expressed during all growth periods and in all peanut organs, but were especially abundant in young leaves and roots. These also had similar expression levels. Yeast two-hybrid analysis showed that PStV multifunctional helper component proteinase (HC-Pro) and viral protein genome-linked (VPg) both interacted with PeaeIF4E and PeaeIF(iso)4E. Bimolecular fluorescence complementation assay showed that there was an interaction between HC-Pro and PeaeIF4E/PeaeIF(iso)4E in the cytoplasm and between VPg and PeaeIF4E/PeaeIF(iso)4E in the nucleus. Silencing either PeaeIF4E or PeaeIF(iso)4E using a virus-induced gene silencing system did not significantly affect PStV accumulation. However, silencing both PeaeIF4E and PeaeIF(iso)4E genes significantly weakened PStV accumulation. The findings of the present study suggest that PeaeIF4E and PeaeIF(iso)4E play important roles in the PStV infection cycle and may potentially contribute to PStV resistance.

  17. High endemism at cave entrances: a case study of spiders of the genus Uthina

    Science.gov (United States)

    Yao, Zhiyuan; Dong, Tingting; Zheng, Guo; Fu, Jinzhong; Li, Shuqiang

    2016-01-01

    Endemism, which is typically high on islands and in caves, has rarely been studied in the cave entrance ecotone. We investigated the endemism of the spider genus Uthina at cave entrances. Totally 212 spiders were sampled from 46 localities, from Seychelles across Southeast Asia to Fiji. They mostly occur at cave entrances but occasionally appear at various epigean environments. Phylogenetic analysis of DNA sequence data from COI and 28S genes suggested that Uthina was grouped into 13 well-supported clades. We used three methods, the Bayesian Poisson Tree Processes (bPTP) model, the Bayesian Phylogenetics and Phylogeography (BPP) method, and the general mixed Yule coalescent (GMYC) model, to investigate species boundaries. Both bPTP and BPP identified the 13 clades as 13 separate species, while GMYC identified 19 species. Furthermore, our results revealed high endemism at cave entrances. Of the 13 provisional species, twelve (one known and eleven new) are endemic to one or a cluster of caves, and all of them occurred only at cave entrances except for one population of one species. The only widely distributed species, U. luzonica, mostly occurred in epigean environments while three populations were found at cave entrances. Additionally, eleven new species of the genus are described. PMID:27775081

  18. Real-time Leishmania genus master mix: a platform compatibility and stability study.

    Science.gov (United States)

    Melanson, Vanessa R; Scheirer, Jessica L; Kalina, Warren V; Wagar, Eric J

    2014-10-01

    Performing diagnostics and vector-pathogen surveillance in austere environments is challenging. On-site diagnostic/detection mitigates vector-borne disease complications during military or humanitarian deployments to disease endemic locals. The mobile molecular diagnostic platform, Joint Biological Agent Identification and Diagnostic System (JBAIDS; BioFire Diagnostics Inc., Salt Lake City, UT, USA), rapidly identifies biothreat pathogens. Although ideal for remote diagnostics, the platform was validated for specific pathogens of insignificant epidemiological consequence. Recognizing the JBAIDS's remote diagnostic/detection versatility, we tested a Leishmania genus real-time PCR master mix validated for use on the SmartCycler® (Cepheid, Sunnyvale, CA, USA) for concomitant use on the JBAIDS. We evaluated assay sensitivity, precision, and specificity of one or more Leishmania spp. on the JBAIDS and found that the JBAIDS produces superior detection sensitivity and specificity compared to the SmartCycler®. We also examined the storage stability of a bulk lot preparation of the Leishmania genus real-time PCR master mix on the SmartCycler® to ensure that long periods of frozen storage that would translate to a field environment with the JBAIDS were not detrimental to the reagent. We found that the bulk master mix maintains its stability over a 13-month time period. Overall, these studies confirm JBAIDS's versatility and demonstrate a streamlined assay development approach where reagents are compatible with both platforms. Copyright © 2014. Published by Elsevier Inc.

  19. Genetic Breeding and Diversity of the Genus Passiflora: Progress and Perspectives in Molecular and Genetic Studies

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    Carlos Bernard M. Cerqueira-Silva

    2014-08-01

    Full Text Available Despite the ecological and economic importance of passion fruit (Passiflora spp., molecular markers have only recently been utilized in genetic studies of this genus. In addition, both basic genetic researches related to population studies and pre-breeding programs of passion fruit remain scarce for most Passiflora species. Considering the number of Passiflora species and the increasing use of these species as a resource for ornamental, medicinal, and food purposes, the aims of this review are the following: (i to present the current condition of the passion fruit crop; (ii to quantify the applications and effects of using molecular markers in studies of Passiflora; (iii to present the contributions of genetic engineering for passion fruit culture; and (iv to discuss the progress and perspectives of this research. Thus, the present review aims to summarize and discuss the relationship between historical and current progress on the culture, breeding, and molecular genetics of passion fruit.

  20. Biomass Industrial Effluent Effect on Carbohydrates, Aminoacids, Nitrite and Nitrite Enzyme Activities of Arachis hypogaea L

    Institute of Scientific and Technical Information of China (English)

    PC Nagajyoti; N Dinakarc; S Suresh; Y Udaykiran; C Suresh; T N V K V Prasad; T Damodharam

    2009-01-01

    The objectives of the present investigations are to see the effects of biomass power plant effluent on the carbohydrates, aminoacids, nitrite and nitrite enzyme activitiesand proline of Arachis hypogaea L. vat TCGS 320 under controlled pot culture methods. Plants were cultivated with 25, 50, 75 and 100% of the effluent and a control without the effluent. The treatment of the crop with 25% of the effluent has shown stimulatory effect on all the biochemical parameters studied. Carbohydrates, starch, aminoacids, protein, nitrate and nitrite reductase enzymatic activities have increased in 10, 15, 20 DAS (days after sowing). In 25 and 30 DAS all biochemical parameters have decreased, due to environmental factors (rainfall, temperature, humidity, etc.). The present investigation clearly indicated that the biomass power plant effluent has stimulatory effect on all the biochemical contents at lower concentration, and at higher concentration they have deleterious effects.

  1. A taxonomic study of the genus Haemophilus, with the proposal of a new species.

    Science.gov (United States)

    Kilian, M

    1976-03-01

    A collection of 426 Haemophilus strains isolated from people with infectious diseases and from the normal flora of mucous membranes in humans and various animal species was studied in an attempt to revise and improve the taxonomy of the genus Haemophilus. The examinations included the determination of a number of biochemical and physiological properties, of which several had not previously been applied to the taxonomy of haemophili. The resulting data reavealed many hitherto unrecognized characters of taxonomic significance and several of the species can now be more accurately defined. The classification presented is supported by the DNA base composition of a large number of representative strains. A diagnostic key to the different taxa is presented. Haemophilus influenzae and H. parainfluenzae have been subdivided into a number of biotypes. It is possible to demonstrate a relationship between the individual biotypes of H. influenzae and the origin of the strains assigned to them. The results indicate that H. aegyptius, H. parahaemolyticus and H. paraphrohaemolyticus do not merit specific status. Four unnamed taxa of V-factor-dependent haemophili have been recognized. The name Haemophilus segnis is proposed for one of these taxa, which consists mainly of strains isolated from the human oral cavity. It is demonstrated that the name H. Ducreyi has been used for different groups of bacteria, and that only one of these groups can legitimately be assigned to the genus Haemophilus. Haemolytic V-factor-dependent strains from swine, previously included in H. parahaemolyticus, are significantly different from strains of human origin and should be named H. pleuropneumoniae. None of the strains from swine and fowls were haemin-dependent. The relationships of these strains to the species H. suis and H. gallinarum, and to H. parasuis and H. paragallinarum are discussed. Haemophilus piscium is shown not to belong to the genus Haemophilus. The taxonomic position of H. aphrophilus

  2. The genus Bipolaris.

    Science.gov (United States)

    Manamgoda, D S; Rossman, A Y; Castlebury, L A; Crous, P W; Madrid, H; Chukeatirote, E; Hyde, K D

    2014-09-01

    The genus Bipolaris includes important plant pathogens with worldwide distribution. Species recognition in the genus has been uncertain due to the lack of molecular data from ex-type cultures as well as overlapping morphological characteristics. In this study, we revise the genus Bipolaris based on DNA sequence data derived from living cultures of fresh isolates, available ex-type cultures from worldwide collections and observation of type and additional specimens. Combined analyses of ITS, GPDH and TEF gene sequences were used to reconstruct the molecular phylogeny of the genus Bipolaris for species with living cultures. The GPDH gene is determined to be the best single marker for species of Bipolaris. Generic boundaries between Bipolaris and Curvularia are revised and presented in an updated combined ITS and GPDH phylogenetic tree. We accept 47 species in the genus Bipolaris and clarify the taxonomy, host associations, geographic distributions and species' synonymies. Modern descriptions and illustrations are provided for 38 species in the genus with notes provided for the other taxa when recent descriptions are available. Bipolaris cynodontis, B. oryzae, B. victoriae, B. yamadae and B. zeicola are epi- or neotypified and a lectotype is designated for B. stenospila. Excluded and doubtful species are listed with notes on taxonomy and phylogeny. Seven new combinations are introduced in the genus Curvularia to accomodate the species of Bipolaris transferred based on the phylogenetic analysis. A taxonomic key is provided for the morphological identification of species within the genus.

  3. A study on the apterous genus Clytomelegena Pic, 1928 (Coleoptera, Disteniidae).

    Science.gov (United States)

    Lin, Meiying; Murzin, Sergey V

    2012-01-01

    The genus Noeconia Murzin, 1988 is synonymized with Clytomelegena Pic, 1928. Clytomelegena kabakovi (Murzin, 1988), comb. n. is newly recorded from China (Guangxi Prov.). And Laos (Attapeu Prov.) is a new locality of this genus. Both sexes are apterous. Photographs and genitalic descriptions of Clytomelegena kabakovi are presented for the first time.

  4. Characterization of the Arachis (Leguminosae) D genome using fluorescence in situ hybridization (FISH) chromosome markers and total genome DNA hybridization

    OpenAIRE

    Germán Robledo; Guillermo Seijo

    2008-01-01

    Chromosome markers were developed for Arachis glandulifera using fluorescence in situ hybridization (FISH) of the 5S and 45S rRNA genes and heterochromatic 4'-6-diamidino-2-phenylindole (DAPI) positive bands. We used chromosome landmarks identified by these markers to construct the first Arachis species ideogram in which all the homologous chromosomes were precisely identified. The comparison of this ideogram with those published for other Arachis species revealed very poor homeologies with a...

  5. Comparative Study of Volatile Compounds from Genus Ocimum

    OpenAIRE

    S. R. Vani; S. F. Cheng; Chuah, C.H.

    2009-01-01

    There are distinct varieties of basil types in the genus Ocimum which makes them very special. Genus Ocimum is widespread over Asia, Africa and Central & Southern America. All basils are member of the Lamiaceae family. The colors of the leaves vary from bright green to purple-green and sometimes almost black. Fresh basil leaves have a strong and characteristic aroma, not comparable to any other spice, although there is a hint of clove traceable. Ocimum Sanctum, also addressed as Ocimum Te...

  6. A taxonomic study on the genus Harpapion Voss, 1966 from China (Coleoptera, Apionidae)

    OpenAIRE

    Zhiliang Wang; Miguel Alonso-Zarazaga; Runzhi Zhang

    2013-01-01

    Harpapion safranum sp. n. and Harpapion borisi sp. n. are described and figured. Harpapion vietnamense (Korotyaev, 1987) is recorded as new for China. The genitalia and terminalia of H. considerandum, H. coelebs and H. vietnamense are redescribed and redrawn. The diagnostic characters of Harpapion are defined. A key to the known species of the genus Harpapion from China is provided. Affinities with the genus Flavopodapion Korotyaev, 1987 are discussed.

  7. A taxonomic study on the genus Harpapion Voss, 1966 from China (Coleoptera, Apionidae).

    Science.gov (United States)

    Wang, Zhiliang; Alonso-Zarazaga, Miguel A; Zhang, Runzhi

    2013-01-01

    Harpapion safranum sp. n. and Harpapion borisi sp. n. are described and figured. Harpapion vietnamense (Korotyaev, 1987) is recorded as new for China. The genitalia andterminalia of H. considerandum, H. coelebs andH. vietnamense are redescribed and redrawn. The diagnostic characters of Harpapion are defined. A key to the known species of the genus Harpapion from China is provided. Affinities with the genus Flavopodapion Korotyaev, 1987 are discussed.

  8. A taxonomic study on the genus Harpapion Voss, 1966 from China (Coleoptera, Apionidae

    Directory of Open Access Journals (Sweden)

    Zhiliang Wang

    2013-12-01

    Full Text Available Harpapion safranum sp. n. and Harpapion borisi sp. n. are described and figured. Harpapion vietnamense (Korotyaev, 1987 is recorded as new for China. The genitalia and terminalia of H. considerandum, H. coelebs and H. vietnamense are redescribed and redrawn. The diagnostic characters of Harpapion are defined. A key to the known species of the genus Harpapion from China is provided. Affinities with the genus Flavopodapion Korotyaev, 1987 are discussed.

  9. Characterization of rhizobia that nodulate Arachis pintoi by RAPD analysis Caracterização de rizóbios capazes de nodular Arachis pintoi via análise de "RAPD"

    Directory of Open Access Journals (Sweden)

    Patrícia Pereira Pinto

    2004-09-01

    Full Text Available The genetic relationships of 85 Arachis pintoi nodulating Rhizobium strains were determined using the random amplified polymorphic DNA (RAPD methods. The analysis included 75 strains isolated from Cerrado soils and 10 other ones of different origins. The results indicated that there is a high level of similarity between these strains and that geographic distribution may affect their phylogenetic relationship. In addition, the results allowed the selection of the most suitable primers for characterisation of these Rhizobium strains which will be useful for implementation of competitiveness studies in Cerrado soils.As relações genéticas de 85 estirpes de Rhizobium capazes de nodular Arachis pintoi foram determinadas usando o método de "RAPD" (Random Amplified Polymorphic DNA. As análises incluíram 75 estirpes isoladas de solos de Cerrado e 10 de diferentes origens. Os resultados indicaram que existe um alto grau de similaridade entre estas estirpes e que a distribuição geográfica pode afetar suas relações filogenéticas. Além disso, os resultados permitiram a seleção de "primers" mais adequados para a caracterização dessas estirpes de Rhizobium, os quais serão úteis para a implementação de estudos de competitividade nos solos de Cerrado.

  10. Unrecognized Antarctic biodiversity: a case study of the genus Odontaster (Odontasteridae; Asteroidea).

    Science.gov (United States)

    Janosik, Alexis M; Halanych, Kenneth M

    2010-12-01

    Antarctica has a complex and multifaceted geologic and oceanographic history that has influenced and shaped patterns of marine invertebrate diversity. This evolutionary history consists of major events on a wide range of time scales such as the formation of the Antarctic Polar Front (25-41 million years ago) to repeated glacial cycles during the past million years. These factors variably influenced genetic connectivity of fauna to produce a highly unique, but incredibly diverse marine community. Use of molecular phylogeographic methods is creating the need to revise our understanding of Antarctic patterns of biodiversity. In particular, almost every phylogeographic study carried out to date, suggests that the biodiversity of Antarctic marine shelf fauna is considerably underestimated. In discovering this diversity, some lineages (i.e., cryptic lineages) show no diagnostic morphological differences whereas others (i.e., unrecognized species) show differences that were unknown to science. The sea star genus Odontaster is among the best-studied of Antarctic invertebrate groups. Nonetheless, two unrecognized lineages were recently discovered along the Antarctic Peninsula, which is one of the best-studied regions in Antarctica. Herein, we elucidate the molecular and morphological uniqueness of these species and name them O. roseus and O. pearsei. The latter is in honor of John Pearse, an Antarctic biologist, as well as past President and long-time member of the Society of Integrative and Comparative Biology.

  11. Spermatological characteristics of the genus Taenia inferred from the ultrastructural study on Taenia hydatigena.

    Science.gov (United States)

    Miquel, Jordi; Khallaayoune, Khalid; Azzouz-Maache, Samira; Pétavy, Anne-Françoise

    2015-01-01

    The present study attempts to establish the sperm ultrastructure baseline for Taenia hydatigena, which is essential for the future research on the location of specific proteins involved in spermatogenesis in this species. Thus, the ultrastructural organisation of the mature spermatozoon is described by means of transmission electron microscopy. Live tapeworms were obtained from an experimentally infected dog in the Department of Pathology and Public Health of the Agronomic and Veterinary Institute Hassan II of Rabat (Morocco). The spermatozoon of T. hydatigena is a filiform cell, which is tapered at both extremities and lacks mitochondria. It exhibits all the characteristics of type VII spermatozoon of tapeworms, namely a single axoneme, a crested body, spiralled cortical microtubules and nucleus, a periaxonemal sheath and intracytoplasmic walls. Other interesting characteristics are the presence of a 2000 nm long apical cone in its anterior extremity and only the axoneme in its posterior extremity. The ultrastructural characters of the spermatozoon of T. hydatigena are compared with those of other cestodes studied to date, with particular emphasis on representatives of the genus Taenia.

  12. Genus Ranges of Chord Diagrams.

    Science.gov (United States)

    Burns, Jonathan; Jonoska, Nataša; Saito, Masahico

    2015-04-01

    A chord diagram consists of a circle, called the backbone, with line segments, called chords, whose endpoints are attached to distinct points on the circle. The genus of a chord diagram is the genus of the orientable surface obtained by thickening the backbone to an annulus and attaching bands to the inner boundary circle at the ends of each chord. Variations of this construction are considered here, where bands are possibly attached to the outer boundary circle of the annulus. The genus range of a chord diagram is the genus values over all such variations of surfaces thus obtained from a given chord diagram. Genus ranges of chord diagrams for a fixed number of chords are studied. Integer intervals that can be, and those that cannot be, realized as genus ranges are investigated. Computer calculations are presented, and play a key role in discovering and proving the properties of genus ranges.

  13. Case-control study of genus-beta human papillomaviruses in plucked eyebrow hairs and cutaneous squamous cell carcinoma.

    Science.gov (United States)

    Iannacone, Michelle R; Gheit, Tarik; Pfister, Herbert; Giuliano, Anna R; Messina, Jane L; Fenske, Neil A; Cherpelis, Basil S; Sondak, Vernon K; Roetzheim, Richard G; Silling, Steffi; Pawlita, Michael; Tommasino, Massimo; Rollison, Dana E

    2014-05-01

    Cutaneous human papillomaviruses (HPV) have been reported in cutaneous squamous cell carcinoma (SCC). We conducted a clinic-based case-control study to investigate the association between genus-beta HPV DNA in eyebrow hairs (EBH) and SCC. EBH from 168 SCC cases and 290 controls were genotyped for genus-beta HPV DNA. SCC tumors from a subset of cases (n = 142) were also genotyped. Viral load was determined in a subset of specimens positive for a single HPV type. Associations with SCC were estimated by odds ratios (OR) and 95% confidence intervals (CI) adjusted for age and sex using logistic regression. Statistical tests were two-sided. EBH DNA prevalence was greater in cases (87%) than controls (73%) (p genus-beta types tested, when accounting for DNA for the same HPV type in the tumor (ORs = 3.44-76.50). Compared to controls, the mean viral DNA load in EBH among the selected cases was greater for HPV5, HPV8 and HPV24, but lower for HPV38. SCC cases were more likely than controls to have HPV DNA+ EBH for single and multiple HPV types, providing additional support for the potential role of genus-beta HPV infections in SCC development. © 2013 UICC.

  14. Do asexual polyploid lineages lead short evolutionary lives? A case study from the fern genus Astrolepis.

    Science.gov (United States)

    Beck, James B; Windham, Michael D; Pryer, Kathleen M

    2011-11-01

    A life-history transition to asexuality is typically viewed as leading to a heightened extinction risk, and a number of studies have evaluated this claim by examining the relative ages of asexual versus closely related sexual lineages. Surprisingly, a rigorous assessment of the age of an asexual plant lineage has never been published, although asexuality is extraordinarily common among plants. Here, we estimate the ages of sexual diploids and asexual polyploids in the fern genus Astrolepis using a well-supported plastid phylogeny and a relaxed-clock dating approach. The 50 asexual polyploid samples we included were conservatively estimated to comprise 19 distinct lineages, including a variety of auto- and allopolyploid genomic combinations. All were either the same age or younger than the crown group comprising their maternal sexual-diploid parents based simply on their phylogenetic position. Node ages estimated with the relaxed-clock approach indicated that the average maximum age of asexual lineages was 0.4 My, and individual lineages were on average 7 to 47 times younger than the crown- and total-ages of their sexual parents. Although the confounding association between asexuality and polyploidy precludes definite conclusions regarding the effect of asexuality, our results suggest that asexuality limits evolutionary potential in Astrolepis.

  15. Leaf Epidermal And Pollen Morphological Studies Of Genus Jatropha L. Euphorbiaceae In Nigeria

    Directory of Open Access Journals (Sweden)

    Soyewo. L.T.

    2015-08-01

    Full Text Available Abstract The predominated plant genus of Jatropha were studied using the epidermal cell morphology and pollen morphology to express more reliable power to its identification aside from the normal flower and other features key arrangement they all had paralytic stomata type with absence of stomata at the abaxial with no traces of trichomes J. multifida is having the highest stomata length of 27.5m with highest stomata with 17.5m while J. curcas J. podagrica and J. gossypifolia varies between 15.0 m in stomata length to 12.5 m in stomata width. They also have straight to curve anticlinal cell walls. They all possess large grain with exine pattern all croton while only J. multifida has the smallest gemmae size of 2.50 m and its polar axis and equatorial diameter carries lower parameters of 52.1 m and 51.6 m respectively while it may be more affected by environmental factor and that is why the results is good but calls for more genetic expression.

  16. Femoral bone strength in large theropod dinosaurs: A study by genus

    Science.gov (United States)

    Lee, Scott

    2015-03-01

    The locomotion of bipedal theropod dinosaurs is controlled by the strength of the femur to resist bending torques (caused by the foot striking the ground and the action of muscles on the femur). The section modulus at the narrowest part measures the ability of the femur to resist such torques. We present the results of our study of the femoral section moduli for six genus of large theropods: Tyrannosaurus, Nanotyrannus, Gorgosaurus, and Albertosaurus of the Late Cretaceous, Acrocanthosaurus of the Early Cretaceous, and Allosaurus of the Late Jurassic. These animals had femora of lengths between 65 and 134 cm. The corresponding section moduli varied between 23 and 570 cm3. Some species of Tyrannosaurus, Gorgosaurus, Allosaurus, and Albertosaurus had femora with lengths in the same 75 to 90 cm range. The section moduli of these animals are all in the same range, showing that the animals had the same abilities of locomotion. That is, Allosaurus of the Late Jurassic could locomote just as well as the Late Cretaceous Tyrannosaurus, Gorgosaurus, and Albertosaurus. There is no evidence that these later theropods had evolved to be any faster than similarly-sized theropods living about 80 million years earlier.

  17. Catfishes of the genus Auchenipterichthys (Osteichthyes: Siluriformes: Auchenipteridae: a revisionary study

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    Carl J. Ferraris Jr.

    Full Text Available The Neotropical auchenipterid catfish genus Auchenipterichthys is reviewed and found to include four species. Auchenipterichthys thoracatus, formerly considered to be widely distributed throughout the Amazon River basin, is found to be restricted to the upper Madeira River basin. The widespread Amazonian species that had been misidentified as A. thoracatus is, instead, A. coracoideus; a species that also occurs in the upper Essequibo River. Auchenipterichthys longimanus, the most widely distributed species of the genus, is found through much of the Amazon and Orinoco River basins. The fourth species of the genus, A. punctatus (and its junior synonym A. dantei, is found in the upper portions of the Orinoco and Negro River basins in Venezuela and the central portions of the Amazon River basin in Brazil. All four species of Auchenipterichthys are redescribed and illustrated, and a key to the species is provided.

  18. Taxonomic study of the leafhopper genus Thagria Melichar (Hemiptera: Cicadellidae: Coelidiinae) from Guangxi, China.

    Science.gov (United States)

    Fan, Zhi-Hua; Li, Zi-Zhong; Dai, Ren-Huai

    2015-01-01

    The paper deals with 21 valid species of the genus Thagria from Guangxi Autonomous Region, China. Eight new species are described and illustrated: T. biprocessa Fan & Dai, sp. nov., T. decussata Fan & Dai, sp. nov., T. irregularis Fan & Dai, sp. nov., T. multispinosa Fan & Dai, sp. nov., T. paramultipars Fan & Li, sp. nov., T. triangula Fan & Li, sp. nov., T. trifasciata Fan & Li, sp. nov. and T. webbi Fan & Li, sp. nov.. A key is given to distinguish all species of this genus from Guangxi, China and maps showing the geographic distribution of new species are also provided. The name Thagria xuae nom. emend. is given for T. xui Nielson.

  19. Chromosome number and satellited chromosome morphology of eleven species of Arachis (Leguminosae Número cromosómico y morfología del cromosoma satelitado en once espécies de Arachis (Leguminosae

    Directory of Open Access Journals (Sweden)

    Andréa del Pilar De Souza Penaloza

    2010-08-01

    Full Text Available The chromosome number was determined in eleven recently-described species of Arachis belonging to five different taxonomic sections. Two new species of section Arachis, A. Gregor/i and A. Krapovickasii, present 2n=20 chromosomes and lack the small 'A' pair, while A. linearifolia and A. Schininii have 2n=20, including the small 'A' pair of chromosomes, typical of the A genome of A. hypogaea. Arachis Schininii, previously listed under A. Hoehnei, a species lacking this pair of chromosomes, has many morphological differences, and is therefore considered to be a new species. Arachis submarginata (sect. Extranervosae, A. Pflugeae and A. Hassleri (sect. Procumbentes, and A. serdoensis and A. interrupta (sect. Heteranthae also have 2n=20. One species of section Rhizomatosae, A. nitida, is tetraploid (2n=40, but is morphologically distinct from the other tetraploids in this section. The new species of section Erectoides, A. porphyrocalyx, shows 2n=18. This is the first count of 2n=18 chromosomes for an Arachis species outside section Arachis and its origin is probably not associated with the origin of the 18 chromosomes occurring in three species of section Arachis Se determinó el número cromosómico de once especies recientemente descriptas del género Arachis, pertenecientes a cinco secciones taxonómicas. En la sección Arachis, A. Gregoryi y A. Krapovickasii presentan 2n=20 cromosomas sin el par "A", mientras A. linearifolia y A. Schininii presentan 2n=20, incluyendo el par "A", típico del genomio A de A. hypogaea. Arachis Schininii presenta características citológicas (presencia del par "A" y morfológicas distintas de A. Hoehnei, bajo la cual estuvo incluida. Arachis submarginata (sección Extranervosaé, A. Pflugeae y A. Hassleri (sección Procumbentes, y A. seridoensis y A. interrupta (sección Heteranthae también presentan 2n=20. Una especie de la sección Rhizomatosae, A. nitida, es tetraploide, con 2n=40, pero morfológicamente distinta

  20. Studies in the Marchantiales (Hepaticae from southern Africa. 1. The genus Dumortiera and D. hirsuta; the genus Lunularia and L. cruciata

    Directory of Open Access Journals (Sweden)

    S. M. Perold

    1993-12-01

    Full Text Available The genera Dumortiera (Dumortieroideae, Marchantiaceae and Lunularia (Lunulariaceae, are briefly discussed. Each genus is represented in southern Africa by only one subcosmopolitan species,  D. hirsuta (Swartz Nees and  L. cruciata (L. Dum. ex Lindberg respectively.

  1. The microstructure of the shell in the genus Oliva (Studies on Olividae. 24)

    OpenAIRE

    Tursch, B.; Machbaete, Y.

    1995-01-01

    The microstructure of the shell of 75 taxa in the genus Oliva has been examined and compared to that of some Olividae species belonging to other groups. Useful taxonomic characters are obtained even by non-destructive examination of the surface. Implications for systematics are discussed.

  2. Study on the genus Daptus ground-beetles (Coleoptera: Carabidae from Korea

    Directory of Open Access Journals (Sweden)

    Ik Je Choi

    2016-03-01

    Full Text Available A genus Daptus Fischer von Waldheim, 1823 of the tribe Harpalini Bonelli, 1810 (Coleoptera: Carabidae is reported for the first time from Korea, based on the Daptus vittatus Fischer von Waldheim from Incheon, Korea. Redescription of the species and illustrations of diagnostic characteristics, including genitalia characteristics of both sexes, are provided.

  3. The Stable Concordance Genus

    OpenAIRE

    Kearney, M. Kate

    2013-01-01

    The concordance genus of a knot is the least genus of any knot in its concordance class. Although difficult to compute, it is a useful invariant that highlights the distinction between the three-genus and four-genus. In this paper we define and discuss the stable concordance genus of a knot, which describes the behavior of the concordance genus under connected sum.

  4. Impact of plant development on the rhizobacterial population of Arachis hypogaea: a multifactorial analysis.

    Science.gov (United States)

    Haldar, Shyamalina; Sengupta, Sanghamitra

    2015-07-01

    Present study investigates the impact of plant development on the structure and composition of root-associated bacterial community of groundnut (Arachis hypogaea) plant, an economically important oilseed legume. Relative abundance of total and active bacteria were studied in bulk soil and rhizosphere samples collected from different growth stages of groundnut plant by sequencing PCR-amplified 16S rRNA gene fragments from soil genomic DNA and reverse-transcribed soil community RNA. Plant growth promoting potential of cultivable rhizobacteria was evaluated using assays for inorganic phosphate solubilization and production of indole acetic acid, siderophores, biofilm, 1-amino-cyclopropane-1-carboxylate deaminase, laccase, and anti-fungal chemicals. Our study demonstrates that groundnut plant rhizosphere harbors a core microbiome populated by Proteobacteria, Actinobacteria, Firmicutes, Bacteroidetes, and Acidobacteria. A distinct bacterial assemblage at nodulation stage due to predominance of Flavobacteria and Actinobacteria in DNA and RNA derived libraries respectively was also observed. Majority of cultivable isolates exhibiting plant growth promoting activities belonged to Proteobacteria and Firmicutes. Of them, Pseudomonas indica and Bacillus megaterium were detected in the rhizosphere samples from all the developmental stages of groundnut plant. This polyphasic study establishes the impact of plant development on rhizobacterial population of groundnut and underscores the applicability of soil isolates as a reliable component in sustainable agriculture.

  5. Studies in Liocranidae (Araneae: a new afrotropical genus featuring a synapomorphy for the Cybaeodinae

    Directory of Open Access Journals (Sweden)

    Rudy Jocqué

    2013-03-01

    Full Text Available Cteniogaster, a new genus of small ground spiders is described from Kenya and Tanzania. It encompasses seven new species, three of which are known from both sexes: C. toxarchus sp. nov., the type species, C. conviva sp. nov. and C. hexomma sp. nov. Three species are known from females only: C. lampropus sp. nov., C. sangarawe sp. nov. and C. taxorchis sp. nov. and one only from males: C. nana sp. nov. The new genus can be recognised by the presence of a posterior ventral abdominal field of strong setae and anterior lateral spinnerets with enlarged piriform gland spigots in males. A cladistic analysis attributes the genus to Liocranidae, Cybaeodinae. The results of the analysis performed do not produce an unequivocal autapomorphy for Liocranidae, but provide a combination of non-homoplasious character changes that offers significant potential for recognising genera as Liocranidae. Moreover, robust apomorphies are determined within Liocranidae for the subfamilies Liocraninae and Cybaeodinae. Based on these findings Toxoniella Warui & Jocqué, 2002 is transferred from Gallieniellidae to Liocranidae, Cybaeodinae. Jacaena Thorell, 1897, Plynnon Deeleman-Reinhold, 2001 and Teutamus Thorell, 1890 are transferred to Corinnidae, Phrurolithinae and Montebello Hogg, 1914 to Gnaphosidae. Itatsina Kishida, 1930 is synonymised with Prochora Simon, 1886.

  6. [Research advances in cadmium pollution of peanut (Arachis hypogaea L.)].

    Science.gov (United States)

    Wang, Kai-rong; Zhang, Lei

    2008-12-01

    Peanut (Arachis hypogaea L.) is a major oil-bearing crop in the world, and as well, an important resource of plant protein and a main raw material for food processing. With the increasing of its direct human consumption and food processing, the Cd concentration in peanut kernel has aroused great concern in recent years. China is a main country of the production and exportation of peanut, but the Cd enrichment in peanut kernel is the main obstacle for its peanut export trade. In this paper, the research advances in Cd pollution of peanut kernel were reviewed, based on the characteristics and mechanisms of Cd accumulation and distribution in peanut kernel, the intra-specific variation of kernel Cd content, and the measures in controlling kernel Cd content. Two strategies were put forward for controlling Cd pollution of peanut kernel, i.e., to reduce the Cd uptake by main root system of peanut plant, and to control the transference of Cd from root to fruit (kernel). In order to applying the strategies effectively, researches on the mechanisms of Cd accumulation in peanut kernel should be enhanced in three aspects, i.e., root vitality and its relationship with Cd accumulation in kernel, mechanism of fruit Cd absorption and its contribution to kernel Cd content, and mechanism of Cd transference in plants and its effects on kernel Cd content.

  7. Progress in genetic engineering of peanut (Arachis hypogaea L.)--a review.

    Science.gov (United States)

    Krishna, Gaurav; Singh, Birendra K; Kim, Eun-Ki; Morya, Vivek K; Ramteke, Pramod W

    2015-02-01

    Peanut (Arachis hypogaea L.) is a major species of the family, Leguminosae, and economically important not only for vegetable oil but as a source of proteins, minerals and vitamins. It is widely grown in the semi-arid tropics and plays a role in the world agricultural economy. Peanut production and productivity is constrained by several biotic (insect pests and diseases) and abiotic (drought, salinity, water logging and temperature aberrations) stresses, as a result of which crop experiences serious economic losses. Genetic engineering techniques such as Agrobacterium tumefaciens and DNA-bombardment-mediated transformation are used as powerful tools to complement conventional breeding and expedite peanut improvement by the introduction of agronomically useful traits in high-yield background. Resistance to several fungal, virus and insect pest have been achieved through variety of approaches ranging from gene coding for cell wall component, pathogenesis-related proteins, oxalate oxidase, bacterial chloroperoxidase, coat proteins, RNA interference, crystal proteins etc. To develop transgenic plants withstanding major abiotic stresses, genes coding transcription factors for drought and salinity, cytokinin biosynthesis, nucleic acid processing, ion antiporter and human antiapoptotic have been used. Moreover, peanut has also been used in vaccine production for the control of several animal diseases. In addition to above, this study also presents a comprehensive account on the influence of some important factors on peanut genetic engineering. Future research thrusts not only suggest the use of different approaches for higher expression of transgene(s) but also provide a way forward for the improvement of crops.

  8. Impact of Fungicides Chlorothalonil and Propiconazole on Microbial Activities in Groundnut (Arachis hypogaea L.) Soils.

    Science.gov (United States)

    Ramudu, A C; Mohiddin, G Jaffer; Srinivasulu, M; Madakka, M; Rangaswamy, V

    2011-01-01

    Introduction of agrochemicals (fungicides) into soil may have lasting effects on soil microbial activities and thus affect soil health. In order to determine the changes in microbial activity in a black clay and red sandy loam soils of groundnut (Arachis hypogaea L.) cultivated fields, a case study was conducted with propiconazole and chlorothalonil to evaluate its effects on soil enzymes (cellulase and invertase) throughout 40 days of incubation under laboratory conditions with different concentrations (1.0, 2.5, 5.0, 7.5, and 10.0 kg ha(-1)). Individual application of the two fungicides at 1.0, 2.5, and 5.0 kg ha(-1) to the soil distinctly enhanced the activities of cellulase and invertase but at higher concentrations of 7.5 and 10 kg ha(-1) was toxic or innocuous to both cellulase and invertase activities. In soil samples receiving 2.5-5.0 kg ha(-1) of the fungicides, the accumulation of reducing sugar was pronounced more at 20 days, and the activity of the cellulase and invertase was drastically decreased with increasing period of incubation up to 30 and 40 days.

  9. Phytotoxicity of cadmium on protein, proline and antioxidant enzyme activities in growing Arachis hypogaea L. seedlings

    Institute of Scientific and Technical Information of China (English)

    2008-01-01

    Phytotoxicity of cadmium on growing Arachis hypogaea L. seedlings was studied. Seeds were exposed to 25, 50, and 100 μmol/L CdCl2 concentrations, for a period of 10, 15, 20 and 25 d. The extent of damage to chlorophyll, protein, proline, nitrate and nitrite reductase, antioxidant enzyme activity in leaves and roots were evaluated after 10 d of cadmium stress. The higher concentration of cadmium (100 μmol/L) resulted (leaves and roots) total chlorophyll 91.01%, protein 79.51%, 83.61%, nitrate reductase 79.39%,80.72% and nitrite reductase 77.07%, 75.88% activity decreased with increase in cadmium concentrations and exposure periods. Cadmium caused significant changes in the activity of antioxidative enzymes. Contrastingly Cd treated plant tissues showed an increase in proline 159.87%, 239.6%, gluthion reductase (GR) 337.72%, 306.14%, superoxide disumutase (SOD) 688.56%, 381.72%, ascorbate peroxidase (APX) 226.47%, 252.14%, peroxidase (POD) 72.19%, 60.29% and catalase (CAT) 228.96%, 214.74% as compared to control. Cadmium stress caused a significant increase in the rate of SOD activity in leaves and roots of plant species. Results show the crop A. hypogaea is highly sensitive even at very low cadmium concentrations.

  10. Sensitization of Radioresistant Prostate Cancer Cells by Resveratrol Isolated from Arachis hypogaea Stems

    Science.gov (United States)

    Kao, Min-Chuan; Lo, U-Ging; Lin, Li-Chiung; Lin, Chun-Jung; Chang, Sheau-Jiun; Chen, Chia-Chang; Hsieh, Jer-Tsong; Lin, Ho; Tang, Chih-Hsin; Lai, Chih-Ho

    2017-01-01

    Resveratrol (RV, 3,4ʹ,5-trihydroxystilbene) is naturally produced by a wide variety of plants including grapes and peanuts (Arachis hypogaea). However, the yield of RV from peanut stem and its potential radiosensitizing effects in prostate cancer (PCa) have not been well investigated. In this study, we characterized RV in peanut stem extract (PSE) for the first time and showed that both RV and PSE dose-dependently induced cell death in DOC-2/DAB2 interactive protein (DAB2IP)-deficient PCa cells with the radioresistant phenotype. Furthermore, the combination of radiation with either RV or PSE induced the death of radioresistant PCa cells through delayed repair of radiation-induced DNA double-strand break (DSB) and prolonged G2/M arrest, which induced apoptosis. The administration of RV and PSE effectively enhanced radiation therapy in the shDAB2IP PCa xenograft mouse model. These results demonstrate the promising synergistic effect of RV and PSE combined with radiation in the treatment of radioresistant PCa. PMID:28081154

  11. Allelopathic Activity of Extracts from Different Brazilian Peanut (Arachis hypogaea L.) Cultivars on Lettuce (Lactuca sativa) and Weed Plants.

    Science.gov (United States)

    Casimiro, G S; Mansur, E; Pacheco, G; Garcia, R; Leal, I C R; Simas, N K

    2017-01-01

    Peanut (Arachis hypogaea L.) is the fourth most consumed oleaginous plant in the world, producing seeds with high contents of lipids, proteins, vitamins, and carbohydrates. Biological activities of different extracts of this species have already been evaluated by many researchers, including antioxidant, antitumoral, and antibacterial. In this work, the allelopathic activity of extracts from different Brazilian peanut cultivars against lettuce (Lactuca sativa) and two weed plants (Commelina benghalensis and Ipomoea nil) was studied. Aerial parts, roots, seeds, and seed coats were used for the preparation of crude extracts. Seed extract partitioning was performed with n-hexane, dichloromethane, ethyl acetate, n-butanol, and aqueous residue. Germination and growth of hypocotyls and rootlets were evaluated after one and five days of incubation with plant extracts, respectively. Crude seed extract and its dichloromethanic partition displayed highest allelopathic activity. These results contribute for the study of new potential natural herbicides.

  12. Systematic study of the genus Vogesella gen. nov. and its type species, Vogesella indigofera comb. nov.

    Science.gov (United States)

    Grimes, D J; Woese, C R; MacDonell, M T; Colwell, R R

    1997-01-01

    A blue-pigmented colony that had a metallic copper-colored sheen was isolated in 1973 from a standard spread plate count preparation of oxidation pond sediment. Over the next 11 years, an additional 12 strains of blue-pigmented bacteria were isolated from freshwater samples and compared to several reference strains of bacteria. Morphological and biochemical tests revealed that these 13 isolates were very similar to [Pseudomonas] indigofera ATCC 19706T (T = type strain) and ATCC 14036. A numerical analysis (in which simple matching similarity coefficients were clustered by the unweighted pair group mathematical averaging method) of morphological and biochemical characteristics revealed 90.0% relatedness between the 13 isolates and [P.] indigofera ATCC 19706T and ATCC 14036 and 73.6% relatedness between the 13 isolates and a cluster containing Burkholderia cepacia ATCC 25416T, Janthinobacterium lividum ATCC 12473T, and the Pseudomonas species tested. A phylogenetic analysis, in which both 5S rRNA and 16S rRNA were used, also revealed that the 13 isolates were closely related to each other and to strains ATCC 19706T and ATCC 14036. In addition, both 5S rRNA and 16S rRNA analyses demonstrated that the isolates and strains ATCC 19706T and ATCC 14036 were members of the beta subdivision of the Proteobacteria and were closely related to Chromobacterium violaceum ATCC 12742T but sufficiently distinct to warrant placement in a new genus. Accordingly, we propose that the 13 isolates and strains ATCC 19706T and ATCC 14306 be placed in the genus Vogesella gen. nov., which is named in honor of Otto Voges, who first isolated and described this blue-pigmented eubacterium in 1893. We also propose that [P.] indigofera be renamed Vogesella indigofera comb. nov. and designated the type species of the genus; strain ATCC 19706 is the type strain of this species.

  13. Cloning of Acyl-ACP Thioesterase FatA from Arachis hypogaea L. and Its Expression in Escherichia coli

    Directory of Open Access Journals (Sweden)

    Gao Chen

    2012-01-01

    Full Text Available In this study, a full-length cDNA of the acyl-ACP thioesterase, AhFatA, was cloned from developing seeds of Arachis hypogaea L. by 3′-RACE. Sequence analysis showed that the open reading frame encodes a peptide of 372 amino acids and has 50–70% identity with FatA from other plants. Real-time quantitative PCR analysis revealed that AhFatA was expressed in all tissues of A. hypogaea L., but most strongly in the immature seeds harvested at 60 days after pegging. Heterologous expression of AhFatA in Escherichia coli affected bacterial growth and changed the fatty acid profiles of the membrane lipid, resulting in directed accumulation towards palmitoleic acid and oleic acid. These results indicate that AhFatA is at least partially responsible for determining the high palmitoleic acid and oleic acid composition of E. coli.

  14. The antisense expression of AhPEPC1 increases seed oil production in peanuts (Arachis hypogaea L.

    Directory of Open Access Journals (Sweden)

    L. Pan

    2016-12-01

    Full Text Available Although phosphoenolpyruvate carboxylases (PEPCs are reported to be involved in fatty acid accumulation, nitrogen assimilation, and salt and drought stresses, knowledge regarding PEPC gene functions is still limited, particularly in peanuts (Arachis hypogaea L.. In this study, the antisense expression of the peanut PEPC isoform 1 (AhPEPC1 gene increased the lipid content by 5.7%–10.3%. This indicated that AhPEPC1 might be related to plant lipid accumulation. The transgenic plants underwent more root elongation than the wild-type under salinity stress. Additionally, the specific down regulation of the AhPEPC1 gene improved the salt tolerance in peanuts. This is the first report on the role of PEPC in lipid accumulation and salt tolerance in peanuts.

  15. Adaptação, produtividade e persistência de Arachis pintoi submetido a diferentes níveis de sombreamento Adaptation, productivity and persistence of Arachis pintoi under different levels of shading

    Directory of Open Access Journals (Sweden)

    Carlos Maurício Soares de Andrade

    1999-01-01

    Full Text Available Este experimento foi realizado com o objetivo de determinar o potencial forrageiro da leguminosa Arachis pintoi, submetida a 0, 30, 50 e 70% de sombreamento, em sistemas silvipastoris e como cobertura do solo em sistemas agroflorestais. O delineamento experimental usado foi o inteiramente casualizado, com quatro repetições. Realizou-se uma avaliação no final do período chuvoso e outra no final do período seco, usando as características altura e vigor de plantas, cobertura do solo e biomassa aérea, subterrânea e total. Os resultados mostraram que A. pintoi apresentou boa adaptação e persistência nos níveis de sombreamento estudados. A produtividade, apesar de ter diminuído com o aumento dos níveis de sombreamento, foi considerada adequada mesmo nos níveis mais altos. Concluiu-se que é possível usar esta leguminosa como cobertura do solo em sistemas agroflorestais e como forrageira em sistemas silvipastoris.The experiment was conducted to determine the forage potential of the Arachis pintoi submitted to 0, 30, 50 and 70% of shading, in silvopastoral systems and as ground cover in agroforestry systems. The experimental design was a completely randomized design with four replications. An evaluation was carried at the end of the rainy season and another at the end of the dry season, using the caracteristics height and plant vigor, ground cover, and total, above and below ground biomass. The results showed that A. pintoi presented good adaptation and persistence in the studied levels of shading. Although its productivity decreased with the increase of the levels of shading, it was considered adequate, even in the highest levels of shading. This indicates that it is possible to use this legume as ground cover in agroforestry systems and as forage in silvopastoral systems.

  16. Genome-Wide Discovery of Microsatellite Markers from Diploid Progenitor Species, Arachis duranensis and A. ipaensis, and Their Application in Cultivated Peanut (A. hypogaea

    Directory of Open Access Journals (Sweden)

    Chuanzhi Zhao

    2017-07-01

    Full Text Available Despite several efforts in the last decade toward development of simple sequence repeat (SSR markers in peanut, there is still a need for more markers for conducting different genetic and breeding studies. With the effort of the International Peanut Genome Initiative, the availability of reference genome for both the diploid progenitors of cultivated peanut allowed us to identify 135,529 and 199,957 SSRs from the A (Arachis duranensis and B genomes (Arachis ipaensis, respectively. Genome sequence analysis showed uneven distribution of the SSR motifs across genomes with variation in parameters such as SSR type, repeat number, and SSR length. Using the flanking sequences of identified SSRs, primers were designed for 51,354 and 60,893 SSRs with densities of 49 and 45 SSRs per Mb in A. duranensis and A. ipaensis, respectively. In silico PCR analysis of these SSR markers showed high transferability between wild and cultivated Arachis species. Two physical maps were developed for the A genome and the B genome using these SSR markers, and two reported disease resistance quantitative trait loci (QTLs, qF2TSWV5 for tomato spotted wilt virus (TSWV and qF2LS6 for leaf spot (LS, were mapped in the 8.135 Mb region of chromosome A04 of A. duranensis. From this genomic region, 719 novel SSR markers were developed, which provide the possibility for fine mapping of these QTLs. In addition, this region also harbors 652 genes and 49 of these are defense related genes, including two NB-ARC genes, three LRR receptor-like genes and three WRKY transcription factors. These disease resistance related genes could contribute to resistance to viral (such as TSWV and fungal (such as LS diseases in peanut. In summary, this study not only provides a large number of molecular markers for potential use in peanut genetic map development and QTL mapping but also for map-based gene cloning and molecular breeding.

  17. Weed Control Systems for Peanut (Arachis hypogaea L.) Grown as a Biofuel Feedstock

    Science.gov (United States)

    Peanut (Arachis hypogaea L.) has not been utilized as a true oilseed crop, especially for the production of fuel. However, peanut makes a superior feedstock for biodiesel, especially in on-farm or small cooperative business plans, where producers can dictate the cost of making their own fuel. Fiel...

  18. Description of Meloidogyne panyuensis sp. n. (Nematoda: Meloidogynidae), parasitic on peanut (Arachis hypogaea L.) in China

    NARCIS (Netherlands)

    Liao, J.; Yang, W.; Feng, Z.; Karssen, G.

    2005-01-01

    Meloidogyne panyuensis n.sp. is described and illustrated from peanut, Arachis hypogaea L., in Guangdong, P.R.China. It is characterized by: female stylet of 13 mu m length, DGO of 10 mu m; perineal pattern ovoid to oval shaped, smooth to moderately coarse striae, dorsal arch relatively low, lateral

  19. The complex tale of the high oleic acid trait in peanut (Arachis hypogaea L.)

    Science.gov (United States)

    Fatty acid composition of oil extracted from peanut (Arachis hypogaea L.) seed is an important quality trait. In particular, a high ratio of oleic (C18:1) relative to linoleic (C18:2) fatty acid (O/L = 10) results in a longer shelf life. Previous reports suggest that the high oleic (~80%) trait wa...

  20. Fatty acid, sterol and proximate compositions of peanut species (Arachis L. seeds from Bolivia and Argentina

    Directory of Open Access Journals (Sweden)

    Grosso, Nelson R.

    1997-08-01

    Full Text Available The oil, protein, ash and carbohydrates contents, iodine value, fatty acid and sterol compositions were studied in seeds of Arachis correntina, A. durannensis, A. monticola, A. batizocoi, and A. cardenasii originating from Bolivia and Argentina. Oil content was greatest in A. batizocoi (mean value 53,35%. The protein level was higher in A. monticola (mean value 29,40% and A. durannensis (29,13%. Mean value of oleic acid varied between 34,91% (A. durannensis and A. cardenasii and 42,60% (Arachis correntina, and linoleic acid oscilated between 40,23% (A. correntina and 45,86% (A. durannensis. The better oleic to linoleic ratio was exhibited by A. correntina (1,06. Iodine value was lower in A. batizocoi (106,0. The sterol composition in the different peanut species showed higher concentration of β-sitosterol (mean values oscilated between 55,70-58,70% following by campesterol (15,18-16,47%, stigmasterol (10,67- 12,27% and Δ5-avenasterol (10,80-12,13%.

    Los contenidos en aceite, proteína, ceniza e hidratos de carbono, índice de acidez, composiciones en ácidos grasos y esteroles fueron estudiadas en semillas de Arachis correntina, A. durannensis, A. Monticola, A. batizocoi, y A. cardenasii originaria de Bolivia y Argentina. El contenido en aceite fue mayor en A. batizocoi (valor medio 53,35%. El nivel de proteína fue más alto en A. monticoia (valor medio 29,40% y A. durannensis (29,13%. El valor medio del ácido oleico varió entre 34,91% (A. Durannensis y A. cardenasii y 42,60% (Arachis correntina, y el ácido linoleico osciló entre 40,23% (A. correntina y 45,86% (A.durannensis. La mejor relación oleico a linoleico fue exhibida por A. correntina (1.06. El índice de iodo fue más bajo en A. batizocoi (106,0. La composición esterólica en las diferentes especies de

  1. Genetic mapping of yield traits using RIL population derived from Fuchuan Dahuasheng and ICG6375 of peanut (Arachis hypogaea L.).

    Science.gov (United States)

    Chen, Yuning; Ren, Xiaoping; Zheng, Yanli; Zhou, Xiaojing; Huang, Li; Yan, Liying; Jiao, Yongqing; Chen, Weigang; Huang, Shunmou; Wan, Liyun; Lei, Yong; Liao, Boshou; Huai, Dongxin; Wei, Wenhui; Jiang, Huifang

    2017-01-01

    The genetic architecture determinants of yield traits in peanut (Arachis hypogaea L.) are poorly understood. In the present study, an effort was made to map quantitative trait loci (QTLs) for yield traits using recombinant inbred lines (RIL). A genetic linkage map was constructed containing 609 loci, covering a total of 1557.48 cM with an average distance of 2.56 cM between adjacent markers. The present map exhibited good collinearity with the physical map of diploid species of Arachis. Ninety-two repeatable QTLs were identified for 11 traits including height of main stem, total branching number, and nine pod- and seed-related traits. Of the 92 QTLs, 15 QTLs were expressed across three environments and 65 QTLs were newly identified. Twelve QTLs for the height of main stem and the pod- and seed-related traits explaining more than 10 % of phenotypic variation showed a great potential for marker-assisted selection in improving these traits. The trait-by-trait meta-analysis revealed 33 consensus QTLs. The consensus QTLs and other QTLs were further integrated into 29 pleiotropic unique QTLs with the confidence interval of 1.86 cM on average. The significant co-localization of QTLs was consistent with the significant phenotypic correlations among these traits. The complexity of the genetic architecture of yield traits was demonstrated. The present QTLs for pod- and seed-related traits could be the most fundamental genetic factors contributing to the yield traits in peanut. The results provide a good foundation for fine mapping, cloning and designing molecular breeding of favorable genes in peanut.

  2. Studies of Madagascan Ptiliidae (Coleoptera) 4: The genus Bambara including eight new species and the first account of blindness and aptery in the genus .

    Science.gov (United States)

    Darby, Michael

    2014-12-15

    This is the fourth report detailing Ptiliidae collected from forest litter by the Moravian Museum (Brno, Czech Republic) expeditions to Madagascar 2010-2013. Eight new species are described and figured: B. edwardi sp. n.; B. lanquidula sp. n.; B. merina sp.n.; B. opaca sp. n.; B. problematica sp. n.; B. secubita sp. n.; B. thomasi sp. n. and B. verecunda sp. n., and new data recorded for  B. dybasi Johnson. Problems concerning the genital morphology and species determination of the parthenogenetic members of the genus are discussed in relation to the findings, and the first blind and apterous species reported.A key to the known species from the island is provided.

  3. Studies on woloszynskioid dinoflagellates IV: the genus Biecheleria gen. nov

    DEFF Research Database (Denmark)

    Moestrup, Øjvind; Lindberg, Karin; Daugbjerg, Niels

    2009-01-01

    The well known freshwater dinoflagellate Woloszynskia pseudopalustris is transferred to the new genus Biecheleria, based on the very unusual structure of the eyespot (comprising a stack of cisternae), the apical apparatus of a single elongate amphiesma vesicle, the structure of the resting cyst....... A new family, the Borghiellaceae, is proposed for the sister group to the Suessiaceae, based on eyespot structure (Type B of Moestrup and Daugbjerg), the morphology of the apical apparatus (if present), and molecular data. It presently comprises the genera Baldinia and Borghiella. Cells of Biecheleria...... pseudopalustris and B. baltica contain a microtubular strand (msp) associated with vesicles containing opaque material. Such structures are known in other dinoflagellates to serve as a peduncle, indicating that the two species may be mixotrophic....

  4. A taxonomic study on the genus Hymenocrater Fisch. & C. A. Mey. (Lamiaceae in Khorasan region

    Directory of Open Access Journals (Sweden)

    Asiyeh Esmaili

    2012-12-01

    Full Text Available The genus Hymenocrater (Lamiaceae, Mentheae comprises 11 species in Flora Iranica of which nine species are mostly distributed in Iran. Among Iranian species, five are found in the Razavi, North and South Khorasan provinces. Eighty morphological characters were measured in 44 herbarium specimens belonging to: H. calycinus, H. bituminosus, H. platystegius and H. elegans. The Kruskal-Wallis Test was implemented to evaluate which characters significantly differentiate the species. Thus, forty-two morphological characters were used in subsequent analyses. Taxonomic relationships were investigated using the Principal Component Analysis (PCA. H. bituminosus and H. platystegius were separated in two distinct groups. There was no sharp distinction between the two other species, H. calycinus and H. elegans. Canonical discriminant analysis (CDA was also applied to find the best discriminating traits among the species.

  5. Taxonomic studies in the Disinae. VI. A revision of the genus Herschelia

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    H. P. Linder

    1981-12-01

    Full Text Available The genus  Herschelia (Disinae, Orchidaceae is revised. Sixteen species, one subspecies and one variety are recognized. Two new species from tropical Africa (H. chimanimaniensis Linder and H. praecox Linder and a new variety from the Cape Province H. lugens (H. Bol. Kraenzl. var. nigrescens Linder are described. Three new combinations are made by transferring the two species of Forficaria and  Disa sect. Microperistera (one species to Herschelia. Thirteen species are illustrated, and the nomenclature and the available information about the habitats of the taxa are discussed. The species are grouped into two subgenera, one of which is further divided into two sections and four series. This classification is based on the putative phylogeny, as determined by the method devised by Wagner (1962.

  6. Taxonomic studies in the Disinae. VI. A revision of the genus Herschelia

    Directory of Open Access Journals (Sweden)

    H. P. Linder

    1981-12-01

    Full Text Available The genus  Herschelia (Disinae, Orchidaceae is revised. Sixteen species, one subspecies and one variety are recognized. Two new species from tropical Africa (H. chimanimaniensis Linder and H. praecox Linder and a new variety from the Cape Province H. lugens (H. Bol. Kraenzl. var. nigrescens Linder are described. Three new combinations are made by transferring the two species of Forficaria and  Disa sect. Microperistera (one species to Herschelia. Thirteen species are illustrated, and the nomenclature and the available information about the habitats of the taxa are discussed. The species are grouped into two subgenera, one of which is further divided into two sections and four series. This classification is based on the putative phylogeny, as determined by the method devised by Wagner (1962.

  7. Isolation of octapeptin D (studies on antibiotics from the genus Bacillus. XXVII).

    Science.gov (United States)

    Shoji, J; Sakazaki, R; Wakisaka, Y; Koizumi, K; Matsuura, S; Miwa, H; Mayama, M

    1980-02-01

    A new peptide antibiotic complex, named octapeptin D, was isolated from culture broth of a microorganism belonging to the genus Bacillus. The trihydrochloride of the antibiotic was obtained as a colorless powder, soluble in water and methanol. The empirical formula, C47H88N12O11.3HCl.H2O, was indicated by elemental analysis. Amino acid analysis on the acid hydrolyzate demonstrated the presence of 2,4-diaminobutyric acid (4 moles), serine (1 mole) and leucine (3 moles). Gas chromatographic analysis with the methylated product of the ethereal extract of the acid hydrolyzate revealed the presence of beta-hydroxy isodecanoic acid, beta-hydroxy decanoic acid, beta-hydroxy isoundecanoic acid and beta-hydroxyanteisoundecanoic acid. Octapeptin D is active against Gram-negative and Gram-positive bacteria in vitro and in vivo.

  8. A CRITICAL STUDY IN THE COMPLEX-POLYMORPHOUS GENUS SCHIMA (THEACEAE

    Directory of Open Access Journals (Sweden)

    S. BLOEMBERGEN

    2015-11-01

    Full Text Available 1. The author considers the genus Schima monotypic. Its only species, Schimaviallichii (DC. Korth., is subdivided into nine geographically separated subspecies andthree varieties. These may be recognised sometimes by one dominating character,mostly, however, by a complex of characters. Several new combinations are made.2. Yet the variability of most of the subspecies is still often enormous and atfirst sight appears complex. Thus we may often encounter the polymorphy of the wholespecies in its subspecies again. It was the striking different percentage-numbers of(phenotypically about the same characters which turned the scale in favour ofthe recognition of the subspecies, besides their geographic separation.The attempts made by the author to divide certain resulting complex-polymorphoussubspecies into units of still lower rank and to trace correlations with peculiaritiesof environment such as different heights above sealevel, or with different stages inthe age of the trees, failed.3. On account of these negative results and the above mentioned different per-centage-numbers for phenotypically about the same characters, the author came tothe conclusion that the most probable explanation is that the variability within thesubspecies is just due to Mendel-segregation and nothing else. It looks very muchas if one is dealing here with the inheriting of striking characters, each caused byone or only a few polymeric factors, characters which hold their own, just as inpanmictically propagated populations (by cross-pollination. This explanation, too,makes the striking fact that in some subspecies we find back phenotypically thewhole, or part, of the polymorphy of the entire species more understandable, as wellas the fact that individuals of different subspecies may agree phenotypically, whereasgenotypically they belong to different races (subspecies. Moreover, all these phenomenastrongly support the monotypic conception of the genus.

  9. A systematic study of the polyphenolic composition of aqueous extracts deriving from several Cistus genus species: evolutionary relationship.

    Science.gov (United States)

    Barrajón-Catalán, Enrique; Fernández-Arroyo, Salvador; Roldán, Cristina; Guillén, Emilio; Saura, Domingo; Segura-Carretero, Antonio; Micol, Vicente

    2011-01-01

    Cistaceae is a large family of shrubs widely spread over the Mediterranean area. It includes Helianthemum, Halimium and Cistus genus. Cistus genus contains approximately 20 species distributed in three subgenus. The essential oil of Cistus species has been thoroughly studied, but the polyphenolic composition of the aerial parts of the different Cistus species needs further characterisation. To perform a comparative analysis of the qualitative and quantitative polyphenolic composition of the aerial parts of the most commonly distributed Spanish Cistus species in order to find a relationship between chemotype and subgenus. Thirteen aqueous extracts derived from 10 different Cistus species were analysed by using HPLC with diode array-detection coupled to electrospray ion trap mass spectrometry technique (HPLC-DAD-ESI-MS/MS). Their major compounds were identified and ellagitannins were quantified. Principal component analysis (PCA) was performed on the most relevant compounds to find out the statistical association between chemotype and variety. Three main groups of compounds were found, i.e. ellagitannins, flavonoids and phenolic acids derivatives. The polyphenolic profile was specific for each species, although the abundance of some compounds also varied depending on the soil type. Whereas C. ladanifer, C. salviifolius, C. populifolius and C. libanotis were specially rich in ellagitannins, C. clusii, C. laurifolius and C. monspeliensis contained significant amounts of flavonoids and much less ellagitannins. In contrast, C. crispus, C. incanus and C. albidus showed a polyphenolic profile mostly based on flavonoids. PCA analysis showed a strong relationship between Cistus subgenus and its chemotype based on the most relevant water-soluble polyphenolic compounds. Chemical composition of the leaves' aqueous extracts from plants belonging to the Cistus genus is strongly related to their subgenus, in agreement to previous taxonomical and phylogenetic divisions. In contrast

  10. Characterization of the Arachis (Leguminosae D genome using fluorescence in situ hybridization (FISH chromosome markers and total genome DNA hybridization

    Directory of Open Access Journals (Sweden)

    Germán Robledo

    2008-01-01

    Full Text Available Chromosome markers were developed for Arachis glandulifera using fluorescence in situ hybridization (FISH of the 5S and 45S rRNA genes and heterochromatic 4'-6-diamidino-2-phenylindole (DAPI positive bands. We used chromosome landmarks identified by these markers to construct the first Arachis species ideogram in which all the homologous chromosomes were precisely identified. The comparison of this ideogram with those published for other Arachis species revealed very poor homeologies with all A and B genome taxa, supporting the special genome constitution (D genome of A. glandulifera. Genomic affinities were further investigated by dot blot hybridization of biotinylated A. glandulifera total DNA to DNA from several Arachis species, the results indicating that the D genome is positioned between the A and B genomes.

  11. Wilting and biological additive effect on in situ degradability and chemical composition of Arachis pintoi cv Belomonte silage

    Directory of Open Access Journals (Sweden)

    Rosana Aparecida Possenti

    2010-01-01

    Full Text Available The purpose of this work was to evaluate the effect of wilting and biological additive amendment on chemical composition, fermentation and ruminal degradability of Arachis pintoi cv Belmonte silage. The following treatments were analysed: T1- Arachis pintoi cv Belmonte fresh forage; T2 - Arachis pintoi cv Belmonte fresh forage plus bacterial additive added to the forage prior to the ensilage; T3- Arachis pintoi cv Belmonte wilted by the sun for 4 hours; T4- Arachis pintoi cv Belmonte wilted by the sun plus bacterial additive. The degradability assay was carried out using three rumen-fistuled steers. The biological additive did not affect the chemical composition of silages, in situ degradability of nutrients DM, NDF and CP and of silage fermentation. However, the wilting treatments of the silages increased DM, CP, hemicelulose and decreased N-NH3 concentration, pH value, degradability of soluble fraction “a” from DM NDF and CP. The analysed characteristics suggest that Arachis pintoi cv Belmonte could satisfactorily preserve the forage quality if wilted by the sun during 4 hours, after harvested.

  12. Isolation and expression analysis of glycerol-3-phosphate acyltransferase genes from peanuts (Arachis hypogaea L.

    Directory of Open Access Journals (Sweden)

    Chi, X.

    2015-09-01

    Full Text Available sn-Glycerol-3-phosphate acyltransferase (GPAT catalyzes the committed step in the production of glycerolipids. The functions of GPAT genes have been intensively studied in Arabidopsis, but not in peanuts (Arachis hypogaea L.. In this study, six AhGPAT genes were isolated from peanuts. Quantitative real-time RT-PCR analysis indicated that the AhGPAT9 transcript was more abundant in the stems, flowers, and seeds, whereas the transcript abundances of five other genes were higher in the leaves or flowers than in the other tissues examined. During seed development, the transcript levels of AhGPAT9 gradually increased, whereas the transcript levels of the other five genes decreased. In addition, the levels of AhGPAT2 transcript were distinctly enhanced after exposure to all four kinds of stress treatments except for ABA-treated leaves. The transcripts of AhGPAT1, AhGPAT6, AhGPAT8 and AhATS1 increased substantially in roots exposed to salt, drought, and ABA stress. The expressions of AhGPAT6, AhGPAT8, AhGPAT9 and AhATS1 were slightly higher in leaves under certain stress conditions than under normal conditions. The present study provides significant information for modifying oil deposition and improving the abiotic stress resistance of peanuts through molecular breeding.La aciltransferasa sn-glicerol-3-fosfato (ATGP cataliza el comprometido paso de la producción de glicerolípidos. Las funciones de los genes AhATGP se han estudiado intensivamente en Arabidopsis, pero no en cacahuete (Arachis hypogaea L.. En este estudio, seis genes AhATGP se aislaron a partir de cacahuetes. El análisis a tiempo real RT-PCR cuantitativa indicó que la transcripción AhATGP9 fue más abundante en tallos, flores y semillas, mientras que la abundancia de la transcripción de los otros cinco genes fueron mayores en hojas o flores que en los otros tejidos examinados. Durante el desarrollo de la semilla, los niveles de transcripción de AhATGP9 aumentaron gradualmente

  13. Study on Genus Bacillus Classification%芽胞杆菌分类研究进展

    Institute of Scientific and Technical Information of China (English)

    刘国红; 林营志; 林乃铨; 刘波

    2011-01-01

    芽胞杆菌属Bacillus是一类产芽胞的革兰氏阳性细菌,好氧或兼性厌氧生活,产生具有抗逆性球形或椭圆形芽胞.芽胞对高温、紫外线、干燥、电离辐射和很多有毒的化学物质都有很强的抗性.由于芽胞的特性,使得芽胞杆菌的分类研究越来越重要.《国际系统与进化微生物学杂志》是由普通微生物学会(SGM)出版的,是国际微生物分类学界公认的一份权威性杂志,它发表和收录了所有的微生物新种发表情况.本文主要介绍了全球近10年在IJSEM上芽胞杆菌分类论文发表的情况,并对几个值得重视的问题进行了评述.%The genus Bacillus contains Gram-positive, aerobic or facultatively anaerobic bacteria that are able to produce bacterial endospores. Spores have a very strong resistance to heat, ultraviolet light, dry, ionizing radiation and a lot of toxic chemicals. As spore properties, Bacillus research has becoming more and more important. International journal of systematic and evolutionary microbiology (IJSEM), published by the Society for General Microbiology (SGM) , is the leading forum for the publication of new taxa of bacteria and yeasts. The papers were mainly introduced references of Bacillus in IJSEM in the past ten years, and approached several desirable questions.

  14. Genetic Variation of Groundnut (Arachis hypogaea L. Genotypes in Semi-Arid Zone Sudan

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    Salih AI Sabiel

    2014-09-01

    Full Text Available Twelve genotypes of groundnut (Arachis hypogaea L. were executed under rain-fed conditions in a semi-arid zone at the Research farm of El Fasher Research Station, Sudan for two consecutive seasons 2006 and 2007. Genotypic and phenotypic variability, heritability in a broad sense and genetic advance were estimated in a randomized complete block design with four replications. High heritability estimate (above 95 % was recorded by hay yield (kg/ha in both seasons and 100- seed weight in season 2006. Moreover, the high genetic advance was recorded for hay yield (kg/ha and pod yield (kg/ha in both seasons. However, a day to 50% flowering was expressed low genotypic coefficient of variation with low genetic advances in both seasons. Highly significant different among genotypes were found for days to 50% flowering, hay yield (kg/ha, shelling (%, while pod yield (kg/ha and 100- seed weight were observed non-significant. The high yielding genotype was ICGV93260 with a pod yield of 1389.1 kg/ha. Pod yield (kg/ha was highly significantly and positively correlated with hay yield (kg/ha, shelling (% and 100- seed weight, while non-significant and negative correlated with days to 50% flowering. Based on the results the characters hay yield (kg/ha, shelling (%, 100- seed weight and days to 50% flowering to be the important characters which would be used in selection for groundnut improvement. The promising genotype identified in this study could provide valuable sources of resistance to climate-change-related stresses and for other consequent breeding activities in groundnut improvement. DOI: http://dx.doi.org/10.3126/ije.v3i3.11060 International Journal of Environment Vol.3(3 2014: 16-23

  15. Chemical composition of aboriginal peanut (Arachis hypogaea L. seeds from Uruguay.

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    Grosso, Nelson R.

    1999-06-01

    Full Text Available Oil, protein, carbohydrate and ash contents, iodine value, and fatty acid and sterol compositions were studied in seed of 9 aboriginal (Arachis hypogaea subsp. fastigiata var. vulgaris cultivars originating from Uruguay. They showed a high protein level as other varieties of the subspecie fastigiata (these protein percentages are higher than varieties of subspecie (hypogaea . Palmitic (16:0, stearic (18:0, oleic (18:1, linoleic (18:2, arachidic (20:0, eicosenoic (20:1, behenic (22:0, and lignoceric (24:0 acids were detected. The cultivar 7 Uv showed higher oleic acid content (42.53% and 0/L ratio (1.09. The cultivars 2 Uv and 5 Uv had higher percentage in linoleic acid (43.67% and 43.40%, respectively. The cultivar 3 Uv and 4 Uv exhibited lower iodine value (104.90 and 104.73, respectively. Cholesterol, campesterol, stigmasterol, β-sitosterol, Δ5-avenasterol, Δ7-estigmasteroI and Δ7-avenasterol were detected in the sterols, β-sitosterol was the most abundant. Significant difference was only found for stigmasterol. The chemical quality of these seeds is characterized by higher protein levels and oils with lower O/L ratio and higher iodine value.

    Se han estudiado los contenidos en aceite, proteína, hidrato de carbono y ceniza, índice de yodo y composición en ácidos grasos y esteroles en semillas de 9 cultivares aborígenes (Arachis hypogaea subsp. fastigiata var. vulgaris originarios de Uruguay. Estos mostraron un nivel alto en proteína como las otras variedades de la subespecie fastigiata (estos porcentajes en proteína son mayores que en las variedades de la subespecie (hypogaea . Se detectaron los ácidos palmítico (16:0, esteárico (18:0, oleico (18:1, linoleico (18:2, araquídico (20:0, eicosenoico (20:1, behénico (22:0 y lignocérico (24:0. El cultivar 7 Uv mostró el mayor contenido en ácido oleico (42. 53% y en la relación oleico

  16. Study on the Tribe Blondeliini from Japan (Diptera, Tachinidae) : VI. A Revision of the Genus Uromedina TOWNSEND

    OpenAIRE

    Hiroshi, SHIMA; Biological Laboratory, College of General Education, Kyushu University

    1985-01-01

    The Oriental genus Uromedina is revised. Uromedina rufipes sp. nov. is described and illustrated from Japan. Three known species, atrata, caudata and eumorphophaga, are redescribed and illustrated. Females of atrata and caudata are described for the first time. A key to the 4 species of the genus is provided.

  17. Studies in Moraceae II. The genus Clarisia Ruiz et Pavon and its synonyms, with a discussion of the generic name

    NARCIS (Netherlands)

    Lanjouw, J.

    1936-01-01

    The Moraceous genus Clarisia was described by Ruiz et Pavon in 1794 in ”Florae Peruvianae, et Chilensis Prodromus” p. 128. This generic name must be rejected, if it is not placed on the list of Nomina Generica Conservanda, as in 1792 there had already been published a genus of this name by Pedro Aba

  18. What is the genus?

    CERN Document Server

    Popescu-Pampu, Patrick

    2016-01-01

    Exploring several of the evolutionary branches of the mathematical notion of genus, this book traces the idea from its prehistory in problems of integration, through algebraic curves and their associated Riemann surfaces, into algebraic surfaces, and finally into higher dimensions. Its importance in analysis, algebraic geometry, number theory and topology is emphasized through many theorems. Almost every chapter is organized around excerpts from a research paper in which a new perspective was brought on the genus or on one of the objects to which this notion applies. The author was motivated by the belief that a subject may best be understood and communicated by studying its broad lines of development, feeling the way one arrives at the definitions of its fundamental notions, and appreciating the amount of effort spent in order to explore its phenomena.

  19. Intragenomic polymorphisms among high-copy loci: a genus-wide study of nuclear ribosomal DNA in Asclepias (Apocynaceae

    Directory of Open Access Journals (Sweden)

    Kevin Weitemier

    2015-01-01

    Full Text Available Despite knowledge that concerted evolution of high-copy loci is often imperfect, studies that investigate the extent of intragenomic polymorphisms and comparisons across a large number of species are rarely made. We present a bioinformatic pipeline for characterizing polymorphisms within an individual among copies of a high-copy locus. Results are presented for nuclear ribosomal DNA (nrDNA across the milkweed genus, Asclepias. The 18S-26S portion of the nrDNA cistron of Asclepias syriaca served as a reference for assembly of the region from 124 samples representing 90 species of Asclepias. Reads were mapped back to each individual’s consensus and at each position reads differing from the consensus were tallied using a custom perl script. Low frequency polymorphisms existed in all individuals (mean = 5.8%. Most nrDNA positions (91% were polymorphic in at least one individual, with polymorphic sites being less frequent in subunit regions and loops. Highly polymorphic sites existed in each individual, with highest abundance in the “noncoding” ITS regions. Phylogenetic signal was present in the distribution of intragenomic polymorphisms across the genus. Intragenomic polymorphisms in nrDNA are common in Asclepias, being found at higher frequency than any other study to date. The high and variable frequency of polymorphisms across species highlights concerns that phylogenetic applications of nrDNA may be error-prone. The new analytical approach provided here is applicable to other taxa and other high-copy regions characterized by low coverage genome sequencing (genome skimming.

  20. Intragenomic polymorphisms among high-copy loci: a genus-wide study of nuclear ribosomal DNA in Asclepias (Apocynaceae)

    Science.gov (United States)

    Straub, Shannon C.K.; Fishbein, Mark; Liston, Aaron

    2015-01-01

    Despite knowledge that concerted evolution of high-copy loci is often imperfect, studies that investigate the extent of intragenomic polymorphisms and comparisons across a large number of species are rarely made. We present a bioinformatic pipeline for characterizing polymorphisms within an individual among copies of a high-copy locus. Results are presented for nuclear ribosomal DNA (nrDNA) across the milkweed genus, Asclepias. The 18S-26S portion of the nrDNA cistron of Asclepias syriaca served as a reference for assembly of the region from 124 samples representing 90 species of Asclepias. Reads were mapped back to each individual’s consensus and at each position reads differing from the consensus were tallied using a custom perl script. Low frequency polymorphisms existed in all individuals (mean = 5.8%). Most nrDNA positions (91%) were polymorphic in at least one individual, with polymorphic sites being less frequent in subunit regions and loops. Highly polymorphic sites existed in each individual, with highest abundance in the “noncoding” ITS regions. Phylogenetic signal was present in the distribution of intragenomic polymorphisms across the genus. Intragenomic polymorphisms in nrDNA are common in Asclepias, being found at higher frequency than any other study to date. The high and variable frequency of polymorphisms across species highlights concerns that phylogenetic applications of nrDNA may be error-prone. The new analytical approach provided here is applicable to other taxa and other high-copy regions characterized by low coverage genome sequencing (genome skimming). PMID:25653903

  1. The genus Vitex: A review

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    Anita Rani

    2013-01-01

    Full Text Available The review includes 161 references on the genus Vitex, and comprises ethnopharmacology, morphology and microscopy, phytoconstituents, pharmacological reports, clinical studies, and toxicology of the prominent species of Vitex. Essential oils, flavonoids, iridoid glycosides, diterpenoides and ligans constitute major classes of phytoconstituents of the genus. A few species of this genus have medicinal value, among these, leaves and fruits of V. agnus-castus Linn. (Verbenaceae has been traditionally used in treatment of women complaints. V. agnus-castus has also been included in herbal remedies, which are in clinical use to regulate the menstrual cycle, reduce premenstrual symptom tension and anxiety, treat some menopausal symptoms as well as to treat hormonally induced acne. Despite a long tradition of use of some species, the genus has not been explored properly. In the concluding part, the future scope of Vitex species has been emphasized with a view to establish their multifarious biological activities and mode of action.

  2. Estudo morfométrico do gênero Panstrongylus Berg, 1879 (Hemiptera, Reduviidae, Triatominae Morphometric study of the genus Panstrongylus Berg, 1879 (Hemiptera, Reduviidae, Triatominae

    Directory of Open Access Journals (Sweden)

    Carolina Magalhães dos Santos

    2003-10-01

    Full Text Available The subfamily Triatominae is actually represented by 137 species distributed among 6 tribes and 19 genera. Within this subfamily, the genus Panstrongylus, Berg 1879, is composed by 13 species widespread in sylvatic, peridomestic, and domestic habitats of Neotropical regions. These species are vectors of Chagas disease and consequently are found associated with its main hosts, such as birds and mammals. Interest in species of this genus has been increasing in the last few years. Reports of several authors indicate these Triatominae to invade and colonize houses, increasing their epidemiological significance. Morphometry was used in this study to investigate correlations among possible closely related species. We measured 224 specimens among 13 species through a set of metric variables of the head. The results indicated that the genus Panstrongylus seems to be homogeneous since 10 of the 14 species were shown to be closely related.

  3. Discopersicus n. gen., a New Member of the Family Tylenchidae Örley, 1880 with Detailed SEM Study on Two Known Species of the Genus Discotylenchus Siddiqi, 1980 (Nematoda; Tylenchidae) from Iran

    Science.gov (United States)

    Yaghoubi, Ali; Pourjam, Ebrahim; Álvarez-Ortega, Sergio; Liébanas, Gracia; Atighi, Mohammad Reza; Pedram, Majid

    2016-01-01

    Discopersicus iranicus n. gen., n. comb., previously described from Iran as a new species under the genus Discotylenchus, is illustrated using light microscope and scanning electron microscope (SEM) observations and further studied using molecular characters. SEM studies revealed the newly proposed genus has oblique amphidial apertures on the lateral sides of the lip region. SEM images are also provided for two species of Discotylenchus, namely D. discretus and D. brevicaudatus, as the first SEM study of the genus. These results confirmed longitudinal amphidial aperture type on lateral sides of the lip region in genus Discotylenchus, as noted by Siddiqi while erecting the genus with D. discretus as the type species. Molecular phylogenetic analyses using partial small subunit (SSU) and large subunit (LSU) rDNA sequences revealed the affinity of the genus Discopersicus n. gen. with members of the subfamily Boleodorinae, as supported by morphological characters (mainly, the oblique amphidial opening).

  4. Discopersicus n. gen., a New Member of the Family Tylenchidae Örley, 1880 with Detailed SEM Study on Two Known Species of the Genus Discotylenchus Siddiqi, 1980 (Nematoda; Tylenchidae) from Iran.

    Science.gov (United States)

    Yaghoubi, Ali; Pourjam, Ebrahim; Álvarez-Ortega, Sergio; Liébanas, Gracia; Atighi, Mohammad Reza; Pedram, Majid

    2016-09-01

    Discopersicus iranicus n. gen., n. comb., previously described from Iran as a new species under the genus Discotylenchus, is illustrated using light microscope and scanning electron microscope (SEM) observations and further studied using molecular characters. SEM studies revealed the newly proposed genus has oblique amphidial apertures on the lateral sides of the lip region. SEM images are also provided for two species of Discotylenchus, namely D. discretus and D. brevicaudatus, as the first SEM study of the genus. These results confirmed longitudinal amphidial aperture type on lateral sides of the lip region in genus Discotylenchus, as noted by Siddiqi while erecting the genus with D. discretus as the type species. Molecular phylogenetic analyses using partial small subunit (SSU) and large subunit (LSU) rDNA sequences revealed the affinity of the genus Discopersicus n. gen. with members of the subfamily Boleodorinae, as supported by morphological characters (mainly, the oblique amphidial opening).

  5. Genus distribution of ladder type and cross type graphs

    Institute of Scientific and Technical Information of China (English)

    2009-01-01

    In this paper a method is given to calculate the explicit expressions of embedding genus distribution for ladder type graphs and cross type graphs. As an example, we refind the genus distri- bution of the graph Jn which is the first class of graphs studied for genus distribution where its genus depends on n.

  6. Genus distribution of ladder type and cross type graphs

    Institute of Scientific and Technical Information of China (English)

    WAN LiangXia; FENG KeQin; LIU YanPei; WANG DianJun

    2009-01-01

    In this paper a method is given to calculate the explicit expressions of embedding genus distribution for ladder type graphs and cross type graphs.As an example,we refind the genus distribution of the graph Jn which is the first class of graphs studied for genus distribution where its genus depends on n.

  7. Aportaciones al conocimiento del género Hieracium L. en España, XVI [Studies on the genus Hieracium L. in Spain, XVI

    Directory of Open Access Journals (Sweden)

    Gonzalo Mateo Sanz

    2013-05-01

    Full Text Available RESUMEN: Se proponen varias novedades peninsulares en el género Hieracium L. (Compositae así como una nueva reestructuración del complejo grupo de H. loscosianum Scheele. ABSTRACT: Studies on the genus Hieracium L. in Spain, XVI. Several novelties on Spanish Hieracium L. (Compositae and a new organization of H. loscosianum Scheele group are here proposed.

  8. Biomass Production of Hairy Roots of Artemisia annua and Arachis hypogaea in a Scaled-Up Mist Bioreactor

    Science.gov (United States)

    Sivakumar, Ganapathy; Liu, Chunzhao; Towler, Melissa J.

    2014-01-01

    Hairy roots have the potential to produce a variety of valuable small and large molecules. The mist reactor is a gas phase bioreactor that has shown promise for low-cost culture of hairy roots. Using a newer, disposable culture bag, mist reactor performance was studied with two species, Artemisia annua L. and Arachis hypogaea (peanut), at scales from 1 to 20 L. Both species of hairy roots when grown at 1 L in the mist reactor showed growth rates that surpassed that in shake flasks. From the information gleaned at 1 L, Arachis was scaled further to 4 and then 20 L. Misting duty cycle, culture medium flow rate, and timing of when flow rate was increased were varied. In a mist reactor increasing the misting cycle or increasing the medium flow rate are the two alternatives for increased delivery of liquid nutrients to the root bed. Longer misting cycles beyond 2–3 min were generally deemed detrimental to growth. On the other hand, increasing the medium flow rate to the sonic nozzle especially during the exponential phase of root growth (weeks 2–3) was the most important factor for increasing growth rates and biomass yields in the 20 L reactors. A. hypogaea growth in 1 L reactors was μ = 0.173 day−1 with biomass yield of 12.75 g DWL−1. This exceeded that in shake flasks at μ = 0.166 day−1 and 11.10 g DWL−1. Best growth rate and biomass yield at 20 L was μ = 0.147 and 7.77 g DWL−1, which was mainly achieved when medium flow rate delivery was increased. The mist deposition model was further evaluated using this newer reactor design and when the apparent thickness of roots (+hairs) was taken into account, the empirical data correlated with model predictions. Together these results establish the most important conditions to explore for future optimization of the mist bioreactor for culture of hairy roots. PMID:20687140

  9. Propiedades emulsificantes y espumantes de las proteínas de harina de cacahuate (Arachis hypogaea Lineau

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    Fett, R.

    2007-09-01

    Full Text Available The functional properties of proteins present in peanut (Arachis hypogaea Lineau flour were studied. The influence of the pH and protein solubility on emulsifying and foaming properties of peanut flour was evaluated. The isoelectric point (Ip of these proteins was found at the pH of 4,0; and the isoelectric region between pH 3,0 and 5,0. The evaluated surface properties decreased in the isolectric region. The emulsifying activity and time stability (30 and 120 minutes significantly decreased at the pI; the emulsifying stability at the temperature of 80°C decreased in all the isoelectric region until the pH of 6,0. The foaming activity had the best values at the pH of 2,0. The correlation between protein solubility and surface properties were more significant for emulsifying properties than for foaming properties.Se estudiaron las propiedades funcionales de las proteínas presentes en la harina de cacahuate (Arachis hypogaea Lineau. Fue evaluada la influencia que tienen el pH y la solubilidad proteica sobre las propiedades emulsificantes y espumantes de las proteínas de harina de cacahuate. El punto isoeléctrico (pI de estas proteínas se encuentra a pH 4,0; mientras que la región isoeléctrica está entre los valores de pH de 3,0 y 5,0. Las propiedades de superficie evaluadas disminuyeron en la región isoeléctrica, siendo que la actividad emulsificante y la estabilidad emulsificante en los tiempos de 30 y 120 minutos disminuyeron fuertemente en el pI; las estabilidades emulsificantes en relación a la temperatura (80 ºC diminuyeron en toda la región isoeléctrica extendiéndose hasta el pH 6,0. La actividad espumante mostró sus mejores valores a pH 2,0. Las correlaciones entre la solubilidad protéica y las propiedades de superficie fueron más importantes para las propiedades emulsificantes que para las espumantes.

  10. Isolation and characterization of novel microsatellite markers and their application for diversity assessment in cultivated groundnut (Arachis hypogaea

    Directory of Open Access Journals (Sweden)

    Crouch Jonathan H

    2008-05-01

    and therefore would be very useful for germplasm analysis, linkage mapping, diversity studies and phylogenetic relationships in cultivated groundnut as well as related Arachis species.

  11. Comparative anatomical studies on some species of the genus Amaranthus (Family: Amaranthaceae for the development of an identification guide

    Directory of Open Access Journals (Sweden)

    Abbas A. El-Ghamery

    2017-06-01

    Full Text Available A study of anatomical features of mature leaves and stems (at fruiting stage of 12 Amaranthus taxa (Family: Amaranthaceae shows high variation between them and supplied new characters. The internal structures were evaluated to clarify their effectiveness in solving taxonomic complexity and identification difficulty in this genus. Observation of the transections of blades showed that the epidermis is uniseriate, ground tissue consists of angular collenchyma and thin parenchyma. The vascular bundles shape has three patterns crescent, ring, ovate. Also they may be united or separated while the midrib shape in cross section has two patterns in which U-shaped, cordate or crescent bundle occurs. All leaves are petiolate. The examination of the petioles exhibits new and varied characters such as petiole shape (cross section, vascular bundles (shape, number, arrangement. While the resulted characters from the observation of the stem structure showed less variation. Nineteen qualitative characters with 38 character states resulted from leaf anatomy. Only (8 characters were sufficient to generate an identification anatomical key. DELTA program was used in key-generation. Also different measurements were carried out by a photo analysis program (Image J, such as lamina thickness, mesophyll thickness, area of upper and lower epidermal cells and thickness of upper and lower epidermal cells to exhibit most possible dissimilarities between the studied species.

  12. Exposure profiles and human papillomavirus infection in skin cancer: an analysis of 25 genus beta-types in a population-based study.

    Science.gov (United States)

    Patel, Anita S; Karagas, Margaret R; Perry, Ann E; Nelson, Heather H

    2008-12-01

    An increasing number of studies report that genus beta human papillomaviruses (HPVs) are associated with skin cancer, with suggestions of specificity for squamous cell carcinoma (SCC) of the skin. We have conducted a systematic examination of HPV DNA in tumors from immunocompetent hosts, including SCC and basal cell carcinoma (BCC), using a highly sensitive methodology and population-based samples to test the hypothesis that a differential prevalence of beta-HPVs exists between SCC (n=101) and BCC (n=101) tumors. When testing for all known beta-HPV types, we found no significant difference in HPV prevalence between the two histologies. However, SCC lesions were significantly more likely to be infected with HPV genus beta-species 1 (includes types 5 and 8), than BCC samples (P=0.01); this difference was not observed for any other species. A histologic difference was also observed for those HPV types previously reported to be important in skin cancer (P=0.003). SCC samples showed a higher rate of infectivity (that is, were positive for multiple types) than BCC tumors (P=0.02). These data highlight the potential importance of various genus beta-HPV types, in particular genus beta-species 1 in SCC, and support the hypothesis of a behavioral difference of the virus within the two major histological skin cancers.

  13. Effect of peanut powder (Arachis hypogeae L., 1753) on zootechnic parameters and sex inversion in catfish Clarias gariepinus.

    Science.gov (United States)

    Jacques, Dougnon T; Elie, Montchowui; Messanvi, Gbeassor

    2015-01-01

    Benin is currently experiencing an overexploitation of piscatorial resources; this requires the research of endogenous means to increase the biomass of fish produced thanks to fish farming activities. The present study intends to improve the zootechnic performances and inverse the sex in catfish Clarias gariepinus. Therefore, 240 larvae obtained from artificial reproduction were used for this study. Three different feed were tested. The control feed (TO) was without peanut powder; contrary, the two experimental feeds were containing the powder at the rates of 10% (T1) and 20% (T2). The best growth of 94.51±27.14 g was recorded with the treatment T2 and 71.32±25.58 g from treatment T1 and finally 54.83±22.19 g from the control group. The sex inversion rate varied from 50% in the control group to 66.13% in lot 1 then 80.13% in lot 2. However, survival rates were low and varied from 26.25% for T2, to 30% in TO then 42.5% in T1. This study permitted to get better results about the zootechnic parameters and the sex inversion in Clarias gariepinus at incorporation rates of 10% and 20% of peanut powder "Arachis hypogeae."

  14. Taxonomic study and partial characterization of antimicrobial compounds from a moderately halophilic strain of the genus Actinoalloteichus

    Directory of Open Access Journals (Sweden)

    Farida Boudjelal

    2011-09-01

    Full Text Available A moderately halophilic actinomycete strain designated AH97 was isolated from a saline Saharan soil, and selected for its antimicrobial activities against bacteria and fungi. The AH97 strain was identified by morphological, chemotaxonomic and phylogenetic analyses to the genus Actinoalloteichus. Analysis of the 16S rDNA sequence of strain AH97 showed a similarity level ranging between 95.8% and 98.4% within Actinoalloteichus species, with A. hymeniacidonis the most closely related. The comparison of the physiological characteristics of AH97 with those of known species of Actinoalloteichus showed significant differences. Strain AH97 showed an antibacterial and antifungal activity against broad spectrum of microorganisms known to be human and plant pathogens. The bioactive compounds were extracted from the filtrate culture with n-butanol and purified using thin layer chromatography and high pressure liquid chromatography procedures. Two active products were isolated, one hydrophilic fraction (F1 and another hydrophobic (F2. Ultraviolet-visible, infrared, mass and ¹H and 13C nuclear magnetic resonance spectroscopy studies suggested that these molecules were the dioctyl phthalate (F2 and an aminoglycosidic compound (F1.

  15. [Morphological and histological study of eggs of six species of the Triatoma genus (Hemiptera: Reduviidae)].

    Science.gov (United States)

    Obara, Marcos T; da Rosa, João A; da Silva, Nilza N; Ceretti, Walter; Urbinatti, Paulo R; Barata, José M S; Jurberg, José; Galvão, Cleber

    2007-01-01

    The objective of this study was to analyze the morphological and histological characteristics of eggs from six triatomine species in order to obtain a generic and specific characterization of this group of Trypanosoma cruzi vectors and better understand their phylogenetic and taxonomic aspects. The eggs of the respective species came from the collection of the Laboratório de Triatomíneos e Culicídeos da Faculdade de Saúde Pública/USP, from the Insetário do Serviço Especial de Saúde de Araraquara - SESA and from the Triatomine insectary of the Laboratório Nacional e Internacional de Referência em Taxonomia de Triatomíneos (FIOCRUZ), in Rio de Janeiro. Morphological studies were done with optical microscopy and scanning electron microscopy. Histological analyses used only optical microscopy. All of the species analyzed showed a predominance of hexagonal cells. The exchorion of Triatoma breyeri Del Ponte, T. costalimai Verano Galvão, and T. tibiamaculata (Pinto) consists of unornamented cells, overlapping or slightly separated, with a smooth, padded appearance. Meanwhile, in T. matogrossensis Leite Barbosa, T. sherlocki Papa, Juberg, Carcavallo, Cerqueira Barata, and T. williami Galvão, Souza Lima, the exchorion cells are ornamented on their entire surface with perforations and fissures. Egg histology showed undulations, pores, and orifices. The study helps to expand the generic and specific knowledge of the Triatominae subfamily. The characteristics identified in the exchorion of the eggshells can help separate close species. These new parameters will back the elaboration of future dichotomous keys, help to determine each vector species role and expand knowledge of the various species.

  16. Isoenzymatic and cytological studies of some Asiatic species of the genus Salsola

    Directory of Open Access Journals (Sweden)

    Aleksandra Wojnicka-Półtorak

    2014-01-01

    Full Text Available The genetic and cytological variability of population of three Salsola species from Asia was investigated, using isozyme electrophoresis and haematoxylin staining. Eight enzyme systems, representing 14-17 loci, were examined: 6PGD, DIA, G6PD, GDH, GOT, MDH, PGM and PGI. Analysis of the chromosome number revealed that the three species have the same number of chromosomes: 2n=18. Parameters describing genetic diversity indicate a very low level of genetic variation of the studied populations. The isozyme data support hypothesis that strong directional selection can result in lower level of genetic variation of arid plant populations.

  17. FTIR Spectrum and Antimutagenicity of Coffea arabica Pulp and Arachis hypogaea Testa In Relation to their In Vitro Antioxidant Properties

    Directory of Open Access Journals (Sweden)

    Jonathan M. Barcelo

    2015-11-01

    Full Text Available Coffee pulp (Coffea arabica and peanut testa (Arachis hypogaea are common agricultural wastes which are extensively studied as potential sources of bioactive compounds. This study attempted to determine the correlation of the antioxidant potential, lipid peroxidation inhibition and antimutagenic activities of the crude extracts of both plant samples. Quantification of phenolic compounds, flavonoids and monomeric anthocyanins and Fourier Transform Infra-red (FTIR analysis were performed to characterize bioactive compounds. Based from the results, peanut testa extract (PTE exhibited higher total antioxidant capacity (TAC compared to coffee pulp extract (CPE at 500 μg/mL but was lower than L-Ascorbic Acid (LAA. The antimutagenic activity of PTE at > 125 μg/mL was higher compared to both RPE and LAA. Mitotic indices of A. cepa treated with PTE+MMS were higher compared to groups treated with RCPE+MMS, LAA+MMS, deionized water and MMS only. Correlation analysis revealed the TAC of ripe coffee pulp extract had significant moderate correlation with its antimutagenic activity but high correlation with LPI. The LPI of CPE showed significant moderate correlation with its antimutagenic activity. In PTE, TAC shows high significant correlation with its antimutagenic property and LPI while LPI has significant moderate correlation with its antimutagenic property. The observed activity of the CPE and PTE may be attributed primarily to the phenolic compounds in both plant extracts.

  18. KAJIAN MACAM PUPUK ORGANIK DAN DOSIS PUPUK P TERHADAP HASIL KACANG TANAH (Arachis hypogaea L. Dl TANAH ENTISOL

    Directory of Open Access Journals (Sweden)

    Sumarno

    2001-07-01

    Full Text Available The aim of the study was to know the affect of organic fertilizer kind and dosage of P fertilizer to yield of peanut (Arachis hypogaea L on entisol. The research was carried out at Colomadu, Karanganyar from September 1999 to January 2000. The field research design was factorial arranged in Completely Randomized Block Design, consist of two factors : organic Fertilizer and Dosage of P fertiilizer. The first factor was kind of organic fertilizer: bokhasi (O1, animal manure (O, and fine compost (O3. The second factor was dosage of P fertilizer consist of four doses: without P fertilizer (P0, 50 kg SP-36 /ha (P1, 100 kg SP-36 /ha (P2 and 150 kg SP-36 /ha (P3. The study indicated that the kind of organic fertilizer non significant to soil pH, available Pemegang, height of plant, total of fill pod, total of empty pod, weight of fresh pod of plant and weight of 100 seeds and significant to fresh weight of plant, weight of fresh pod of plot, weight of dry pods of plot and weight of seed of plant. Bokhasi indicated better affect than animal manure and fine compost. P fertilizer incraesed weight fresh pod of plot and weight of dry of plot.

  19. New species, nomenclatural changes and recent taxonomic studies in the genus Stylosanthes (Leguminosae: An update

    Directory of Open Access Journals (Sweden)

    Teodardo Calles

    2016-05-01

    Full Text Available Since the last taxonomic overview during the 1982 Stylosanthes Symposium in Townsville, Australia, 10 new species: S. falconensis, S. longicarpa, S. maracajuensis, S. nunoi, S. quintanarooensis, S. recta, S. salina, S. seabrana, S. vallsii and S. venezuelensis; and 1 botanical variety: S. guianensis var. pauciflora; have been validly described. Furthermore, 2 nomenclatural changes have been proposed, both being elevations of botanical varieties to the rank of species: S. gracilis and S. rostrata. In the major taxonomic databases, The Plant List and GRIN, the taxonomic status (“accepted” vs. “synonym” vs. “unresolved” of some of these new taxa, however, differs. In addition, this paper reports on Stylosanthes names that can be found in the post-symposium literature but have not been validly published, and on recent regional studies of Stylosanthes taxonomy. Suggested research needs as perceived by non-botanists include an updated Stylosanthes monograph and taxonomic studies within the S. guianensis, S. hamata and S. scabra species complexes. Keywords: Taxonomy, validly published names.DOI: 10.17138/TGFT(4122-128

  20. Implications of a molecular phylogenetic study of the Malagasy genus Cedrelopsis and its relatives (Ptaeroxylaceae).

    Science.gov (United States)

    Razafimandimbison, Sylvain G; Appelhans, Marc S; Rabarison, Harison; Haevermans, Thomas; Rakotondrafara, Andriarimalala; Rakotonandrasana, Stephan R; Ratsimbason, Michel; Labat, Jean-Noël; Kessler, Paul J A; Smets, Erik; Cruaud, Corinne; Couloux, Arnaud; Randrianarivelojosia, Milijaona

    2010-10-01

    Ptaeroxylaceae is an Afro-Malagasy family containing three genera, Bottegoa, Cedrelopsis, and Ptaeroxylon. Although the family is morphologically well delimited, it is currently considered part of the subfamily Spathelioideae in a broadly circumscribed orange family (Rutaceae). The Malagasy Cedrelopsis has traditionally been associated with different families of the order Sapindales and its phylogenetic placement in Rutaceae sensu lato has yet to be tested with molecular data. The present molecular phylogenetic study reaffirms the monophyly of Ptaeroxylaceae and its placement in Spathelioideae. Therefore, molecules and morphology support close affinities between Bottegoa, Cedrelopsis, and Ptaeroxylon and also their current generic circumscriptions. We report a case of an evolutionary change from one-seeded to two-seeded carpels within the Harrisonia-Cneorum-Ptaeroxylaceae clade of Spathelioideae. Finally, the sister-group relationship between the African Bottegoa and the Afro-Malagasy Ptaeroxylon-Cedrelopsis clade suggests an African origin of Cedrelopsis.

  1. SEM study of species of Oswaldella Stechow, 1919 (Cnidaria, Hydrozoa, Kirchenpaueriidae), with an annotated checklist of the species of the genus.

    Science.gov (United States)

    Molinero, A González; Cantero, A L Peña

    2015-12-04

    Oswaldella is the most speciose genus, and one of the most characteristic, of hydrozoans inhabiting the Antarctic benthic marine ecosystem. Its species have relatively many important taxonomic characters allowing for their identification. Some of them, however, are difficult to study properly with a compound microscope. With the aim of improving scientific knowledge concerning species of the genus, a SEM survey of species of Oswaldella was carried out to study key morphological characters. Fourteen out of the 27 known nominal species were considered. The study has revealed unknown important characters, such as the presence of nematothecae associated with the nematophores at the cauline apophyses, and has provided a better understanding of others, such as the shape of the nematotheca associated with the medial infrathecal nematophore. A final general discussion on some of the characters studied and on the bathymetrical and geographical distribution of all known species is also included. Finally, an annotated checklist including all known nominal species has also been assembled.

  2. Isolation and identification of allelochemicals produced by B. sonorensis for suppression of charcoal rot of Arachis hypogaea L.

    Science.gov (United States)

    Pandya, Urja; Saraf, Meenu

    2015-05-01

    Bacillus sonorensis MBCU2 isolated from vermicompost-amended soil from Gujarat, India showed most antagonistic activity against Macrophomina phaseolina by dual culture screening. The culture supernatant of MBCU2 completely suppressed the mycelia growth of pathogen, indicating that suppression was due to the presence of allelochemicals in the culture filtrate. Results of scanning electron microscopy revealed that MBCU2 caused morphological alteration in mycelia of M. phaseolina as evident by hyphal lysis and perforation. Lipopeptides (iturin A and surfactin) produced by MBCU2 were detected and identified by MALDI-TOF-MS as well as liquid chromatography coupled with ESI-MS/MS. Pot trial studies conducted by seed bacterization with MBCU2 resulted in statistically significant increase in Arachis hypogaea L. vegetative growth parameters such as root length (91%), shoot length (252%), fresh weight (71%), dry weight (57%), number of pod (128%), and number of seed (290%) in M. phaseolina infested soil over control as well as decreased M. phaseolina disease severity. We suggest that allelochemicals production can be linked to the mechanism of protection of A. hypogaea L. from M. phaseolina by B. sonorensis MBCU2. © 2014 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

  3. Evaluation of silver nanoparticles toxicity of Arachis hypogaea peel extracts and its larvicidal activity against malaria and dengue vectors.

    Science.gov (United States)

    Velu, Kuppan; Elumalai, Devan; Hemalatha, Periaswamy; Janaki, Arumugam; Babu, Muthu; Hemavathi, Maduraiveeran; Kaleena, Patheri Kunyil

    2015-11-01

    Silver nanoparticles (AgNPs) were successfully synthesised from aqueous silver nitrate using the extracts of Arachis hypogaea peels. The synthesised SNPs were characterized by Fourier transform-infrared spectroscopy analysis, X-ray diffraction, transmission electron microscopy analysis and high-resonance scanning electron microscopy, and energy dispersive X-ray spectroscopy. AgNPs were well defined and measured 20 to 50 nm in size. The nanoparticles were crystallized with a face-centered cubic structure. Larvicidal activity of synthesised AgNPs from A. hypogaea peels was tested for their larvicidal activity against the fourth instar larvae of Aedes aegypti (Yellow fever), Anopheles stephensi (Human malaria). The results suggest that the synthesised AgNPs have the potential to be used as an ideal eco-friendly resource for the control of A. aegypti and A. stephensi. This study provides the first report on the mosquito larvicidal activity of synthesised AgNPs from A. hypogaea peels against vectors of malaria and dengue.

  4. The genus Cyclidiopsis: an obituary.

    Science.gov (United States)

    Bennett, Matthew S; Triemer, Richard E

    2014-01-01

    Since its creation in 1917 the genus Cyclidiopsis, and its validity, has been a source of debate among euglenid taxonomists. While many authors have supported its legitimacy, various other authors have considered it to be a subgenus of Astasia or even promoted its complete dissolution. In this study, we have sequenced the small subunit and large subunit ribosomal DNA of Cyclidiopsis acus, the type species for the genus. Subsequent phylogenetic analyses showed that C. acus grouped with taxa from the genus Lepocinclis, which necessitated the removal of this taxon from Cyclidiopsis and into Lepocinclis as Lepocinclis cyclidiopsis nom. nov. After an extensive literature search it was determined that only two other previously described Cyclidiopsis taxa were morphologically distinct, and the rest were reassigned as synonyms of L. cyclidiopsis. These findings prompted a re-examination of the initial description of Cyclidiopsis, and it was determined that the morphological characters establishing the genus as a distinct group were no longer valid in light of current phylogenetic analyses and the emended generic description for Lepocinclis. Therefore, the remaining two taxa were formally moved to the genus Lepocinclis as L. crescentia comb. nov. and L. pseudomermis comb. nov.

  5. Spatiotemporal Diversification of the True Frogs (Genus Rana): A Historical Framework for a Widely Studied Group of Model Organisms.

    Science.gov (United States)

    Yuan, Zhi-Yong; Zhou, Wei-Wei; Chen, Xin; Poyarkov, Nikolay A; Chen, Hong-Man; Jang-Liaw, Nian-Hong; Chou, Wen-Hao; Matzke, Nicholas J; Iizuka, Koji; Min, Mi-Sook; Kuzmin, Sergius L; Zhang, Ya-Ping; Cannatella, David C; Hillis, David M; Che, Jing

    2016-09-01

    True frogs of the genus Rana are widely used as model organisms in studies of development, genetics, physiology, ecology, behavior, and evolution. Comparative studies among the more than 100 species of Rana rely on an understanding of the evolutionary history and patterns of diversification of the group. We estimate a well-resolved, time-calibrated phylogeny from sequences of six nuclear and three mitochondrial loci sampled from most species of Rana, and use that phylogeny to clarify the group's diversification and global biogeography. Our analyses consistently support an "Out of Asia" pattern with two independent dispersals of Rana from East Asia to North America via Beringian land bridges. The more species-rich lineage of New World Rana appears to have experienced a rapid radiation following its colonization of the New World, especially with its expansion into montane and tropical areas of Mexico, Central America, and South America. In contrast, Old World Rana exhibit different trajectories of diversification; diversification in the Old World began very slowly and later underwent a distinct increase in speciation rate around 29-18 Ma. Net diversification is associated with environmental changes and especially intensive tectonic movements along the Asian margin from the Oligocene to early Miocene. Our phylogeny further suggests that previous classifications were misled by morphological homoplasy and plesiomorphic color patterns, as well as a reliance primarily on mitochondrial genes. We provide a phylogenetic taxonomy based on analyses of multiple nuclear and mitochondrial gene loci. [Amphibians; biogeography; diversification rate; Holarctic; transcontinental dispersal. © The Author(s) 2016. Published by Oxford University Press, on behalf of the Society of Systematic Biologists. All rights reserved. For Permissions, please email: journals.permissions@oup.com.

  6. Evaluation of Different Groundnut Arachis hypogea L. Cultivars Against Termites, Odontotermes obesus (Rambur) in Rawalpindi, Pakistan

    OpenAIRE

    Muhammad Usman Malik; Humayun Javed; Mahmood Ayyaz

    2015-01-01

    Six groundnut (Arachis hypogea L.) cultivars i.e. Golden, BARI-2000, Australian, BARD-479, ICG-7326 and 2KCGC20 were evaluated against the attack of Odontotermes obesus in terms of percentage infestation of workers and soldiers, their damage and impact on the yield. The maximum mean populations of O. obesus workers were recorded on 2KCGC20 (30.82±2.75 workers/plot) and Australian (30.65±2.92 workers/plot), followed by BARI 2000 (19.55±2.51 workers/plot), Golden (17.30±2.27 workers/plot) and B...

  7. El cacahuate (Arachis hypogaea L.); como factor de desarrollo rural regional

    OpenAIRE

    Calixto Escobar, Elizabeth

    2012-01-01

    Esta investigación, se realizó en los Municipios de Ahuatlan, Tlapanala y Huaquechula, Puebla, México, con el objetivo de determinar los factores de una estrategia de desarrollo rural, orientado a los productores regionales de cacahuate (Arachis hypogaea L.), que fomente la incorporación de valor agregado al cultivo del cacahuate mediante su industrialización y comercialización. La metodología usada se desarrollo en dos fases; primera fase “Diagnóstico”: consistió en la recolección de la...

  8. Fish oil versus arachis oil food supplementation in relation to pregnancy duration in rats

    DEFF Research Database (Denmark)

    Olsen, S.F.; Hansen, Harald S.; Jensen, B.

    1990-01-01

    Throughout pregnancy, Lewis rats were fed standard rat chow supplemented with 15% (w/w) of either MaxEPA fish oil (FO) or arachis oil (AO); a third group was fed standard rat chow only (St) (n = 15, 15, and 16 rats, respectively). Compared to AO-rats, FO-rats had substantially higher levels of n-3...... may be related to the lower maternal weight gain during pregnancy and the lower food consumption observed in FO-rats (p 0.1). The findings are compatible with the hypothesis that gestational age...

  9. Avaliação do feno de Arachis pintoi utilizando o ensaio de digestibilidade in vivo Evaluation of Arachis pintoi hay using in vivo digestibility trial

    Directory of Open Access Journals (Sweden)

    Márcio Machado Ladeira

    2002-11-01

    Full Text Available Utilizaram-se seis ovinos, sem raça definida, para avaliar o consumo e as digestibilidades aparentes totais da matéria seca (MS, matéria orgânica (MO, proteína bruta (PB, extrato etéreo (EE, carboidratos totais (CHO, fibra em detergente neutro (FDN, carboidratos não fibrosos (CNF, fibra em detergente ácido (FDA, celulose (CEL, hemicelulose (HCEL e energia do feno de Arachis pintoi. Também foi determinado o balanço de nitrogênio. Os animais foram colocados em gaiolas metabólicas e receberam apenas o feno de A. pintoi mais sal mineral como componentes da dieta. O Arachis pintoi foi colhido com aproximadamente 100 dias. O fornecimento do feno foi ad libitum, sendo a quantidade calculada para permitir sobras de 20%. O experimento teve 20 dias de duração, sendo 15 dias de adaptação e cinco dias para coletas de amostras do feno, sobras, fezes e urina. Foi utilizado o óxido crômico, em duas doses diárias de 1 g cada, como indicador externo para estimar a produção fecal. Os consumos de MS e MO do A. pintoi foram 90,17 e 85,67 g/kg0,75, respectivamente. Os teores de PB, nutrientes digestíveis totais (NDT e energia metabolizável (EM foram, respectivamente, 14,3%, 66,4% e 2,0 Mcal/kg MS. O balanço de nitrogênio (N foi de 12,1 g/dia e representou 40,2% de todo N consumido. As digestibilidades aparentes totais da MS, MO, PB, EE, CHO, FDN, CNF, FDA, CEL, HCEL e energia foram 64,4, 68,4, 70,0, 63,4, 68,2, 53,6, 93,3, 47,2, 62,8, 66,8 e 63,7%, respectivamente. O feno de Arachis pintoi apresentou consumo e digestibilidades dos nutrientes elevados para uma forrageira, permitindo assim fornecer nutrientes em quantidades suficientes para ganhos de peso satisfatórios, o que dá maior suporte para o uso dessa leguminosa na alimentação de ruminantes.Six sheep were used to evaluate intake and total apparent digestibilities of dry matter (DM, organic matter (OM, crude protein (CP, ether extract (EE, total carbohydrates (CHO, neutral detergent

  10. Morphological and allozyme studies of midwife toads (genus Alytes), including the description of two new taxa from Spain

    NARCIS (Netherlands)

    Arntzen, J.W.; García-París, M.

    1995-01-01

    Allozyme variation in 31 to 50 presumptive loci of 12 populations of European midwife toads of the genus Alytes show appreciable genetic divergences (DiNe from 0.29 to 0.72) among four groups. These groups correspond to A. cisternasii Boscá, 1879, A. obstetricans (Laurenti, 1768), A. muletensis (San

  11. Integrative Taxonomic Study of the Purse Crab Genus Persephona Leach, 1817 (Brachyura: Leucosiidae): Combining Morphology and Molecular Data.

    Science.gov (United States)

    Magalhães, Tatiana; Robles, Rafael; Felder, Darryl L; Mantelatto, Fernando L

    2016-01-01

    Marine crabs of the genus Persephona Leach, 1817 are restricted to American waters of the western Atlantic and eastern Pacific Oceans. Subfamilial assignment of this taxon has varied between authors and its species composition remain in question. We conducted a comparative study based on morphology and molecular phylogenetics for all ten recognized species of Persephona, along with Iliacantha hancocki. We tested whether Persephona finneganae, P. lichtensteinii, and P. crinita represent a single species as suggested by some authors; whether specimens identified as P. punctata, P. mediterranea, and P. aquilonaris warrant treatment as separate species; and whether I. hancocki should be regarded as a junior synonym of P. subovata. Diagnostic morphological characters (of the carapace, chelipeds, and third maxillipeds) were used along with gonopod (male first pleopod 1) features and live coloration. The 16S rRNA and the Cytochrome Oxidase I (COI) (DNA barcoding) mitochondrial genes were used as molecular markers. Both morphological and molecular analyses revealed that putative specimens of P. crinita from Brazil and those assigned to P. finneganae were no different from specimens presently assignable to P. lichtensteinii. P. finneganae is regarded as a junior synonym of P. lichtensteinii, and we apply P. crinita only to specimens we examined from the Gulf of Mexico. Specimens from Brazil previously reported as P. crinita are herewith concluded to represent P. lichtensteinii. Additionally, P. townsendi is a junior synonym of P. orbicularis, Iliacantha hancocki is concluded to be a junior synonym of P. subovata, while P. aquilonaris and P. mediterranea are found to represent separate species. On the basis of our revisions, eight species of Persephona are considered valid, and the reported distribution for P. crinita is restricted.

  12. Integrative Taxonomic Study of the Purse Crab Genus Persephona Leach, 1817 (Brachyura: Leucosiidae): Combining Morphology and Molecular Data

    Science.gov (United States)

    Magalhães, Tatiana; Robles, Rafael; Felder, Darryl L.

    2016-01-01

    Marine crabs of the genus Persephona Leach, 1817 are restricted to American waters of the western Atlantic and eastern Pacific Oceans. Subfamilial assignment of this taxon has varied between authors and its species composition remain in question. We conducted a comparative study based on morphology and molecular phylogenetics for all ten recognized species of Persephona, along with Iliacantha hancocki. We tested whether Persephona finneganae, P. lichtensteinii, and P. crinita represent a single species as suggested by some authors; whether specimens identified as P. punctata, P. mediterranea, and P. aquilonaris warrant treatment as separate species; and whether I. hancocki should be regarded as a junior synonym of P. subovata. Diagnostic morphological characters (of the carapace, chelipeds, and third maxillipeds) were used along with gonopod (male first pleopod 1) features and live coloration. The 16S rRNA and the Cytochrome Oxidase I (COI) (DNA barcoding) mitochondrial genes were used as molecular markers. Both morphological and molecular analyses revealed that putative specimens of P. crinita from Brazil and those assigned to P. finneganae were no different from specimens presently assignable to P. lichtensteinii. P. finneganae is regarded as a junior synonym of P. lichtensteinii, and we apply P. crinita only to specimens we examined from the Gulf of Mexico. Specimens from Brazil previously reported as P. crinita are herewith concluded to represent P. lichtensteinii. Additionally, P. townsendi is a junior synonym of P. orbicularis, Iliacantha hancocki is concluded to be a junior synonym of P. subovata, while P. aquilonaris and P. mediterranea are found to represent separate species. On the basis of our revisions, eight species of Persephona are considered valid, and the reported distribution for P. crinita is restricted. PMID:27099956

  13. Quantitative testing of the methodology for genome size estimation in plants using flow cytometry: a case study of the Primulina genus

    OpenAIRE

    Wang, Jing; Liu, Juan; Kang, Ming

    2015-01-01

    Flow cytometry (FCM) is a commonly used method for estimating genome size in many organisms. The use of FCM in plants is influenced by endogenous fluorescence inhibitors and may cause an inaccurate estimation of genome size; thus, falsifying the relationship between genome size and phenotypic traits/ecological performance. Quantitative optimization of FCM methodology minimizes such errors, yet there are few studies detailing this methodology. We selected the genus Primulina, one of the most r...

  14. Quantitative testing of the methodology for genome size estimation in plants using flow cytometry: a case study of the Primulina genus

    OpenAIRE

    Jing eWang; Juan eLiu; Ming eKang

    2015-01-01

    Flow cytometry (FCM) is a commonly used method for estimating genome size in many organisms. The use of flow cytometry in plants is influenced by endogenous fluorescence inhibitors and may cause an inaccurate estimation of genome size; thus, falsifying the relationship between genome size and phenotypic traits/ecological performance. Quantitative optimization of FCM methodology minimizes such errors, yet there are few studies detailing this methodology. We selected the genus Primulina, one of...

  15. Studies in the Marchantiales (Hepaticae) from southern Africa. 1. The genus Dumortiera and D. hirsuta; the genus Lunularia and L. cruciata

    OpenAIRE

    S. M. Perold

    1993-01-01

    The genera Dumortiera (Dumortieroideae, Marchantiaceae) and Lunularia (Lunulariaceae), are briefly discussed. Each genus is represented in southern Africa by only one subcosmopolitan species,  D. hirsuta (Swartz) Nees and  L. cruciata (L.) Dum. ex Lindberg respectively.

  16. Resurrection of the genus Haplanthus (Acanthaceae: Andrographinae)

    NARCIS (Netherlands)

    Gnanasekaran, G.; Murthy, G.V.S.; Deng, Y.F.

    2016-01-01

    A systematic morphological study of Andrographis (Acanthaceae: Andrographinae) in India has revealed that the genus Haplanthus is distinct from Andrographis. We resurrect the genus Haplanthus here with four species, one of which contains three varieties. Five new combinations are proposed: H. laxifl

  17. A monograph of the genus Evolvulus

    NARCIS (Netherlands)

    Ooststroom, van S.J.

    1934-01-01

    The great difficulties arising in the identification of a number of plants belonging to the genus Evolvulus, which plants were found in several recent collections of Convolvulaceae and were kindly entrusted to me for study, induced me to submit this genus to a further examination. It soon proved how

  18. The genus Squamanita

    NARCIS (Netherlands)

    Bas, C.

    1965-01-01

    By transferring Cystoderma paradoxum Smith & Sing. and Vaginata umbonata Sumst. to the genus Squamanita and the description of the new species, S. pearsonii, the number of species of that genus is raised from two to five. In addition two more species of Squamanita are provisionally described. An

  19. An AS-PCR assay for accurate genotyping of FAD2A/FAD2B genes in peanuts (Arachis hypogaea L.

    Directory of Open Access Journals (Sweden)

    Yu, H. T.

    2013-09-01

    Full Text Available FAD2A and FAD2B are homoeologous genes from A and B genomes in cultivated peanuts (Arachis hypogaea L. encoding fatty acid desaturates which convert oleate to linoleate. To study the genetics of oleate and breed high oleate peanut cultivars, a simple allele specific-PCR (AS-PCR protocol for the accurate genotyping of FAD2A/FAD2B was developed to discriminate the wild and mutant allele of both genes (FAD2A 448 G > A and FAD2B 441_442insA. The results may serve to develop a feasible procedure for producing highly desired high oleate peanut cultivars through hybridization.FAD2A y FAD2B son genes homólogos de genomas A y B en cacahuete cultivado (Arachis hypogaea L. que codifican las desaturasas de ácidos grasos que convierten oleato a linoleato. Para estudiar la genética de las variedades mejoradas de cacahuete alto oleato, fue desarrollado un protocolo sencillo del alelo específico PCR-(AS-PCR para la determinación precisa del genotipo de FAD2A/FAD2B y discriminar el alelo silvestre y el mutante de ambos genes (FAD2A 448 G > A y FAD2B 441_442insA. Los resultados pueden servir para desarrollar un procedimiento viable para la producción de cultivares deseados de cacahuetes alto oleato a través de hibridación.

  20. Utility of COI, CAD and morphological data for resolving relationships within the genus Sarcophaga (sensu lato) (Diptera: Sarcophagidae): a preliminary study.

    Science.gov (United States)

    Meiklejohn, Kelly A; Wallman, James F; Pape, Thomas; Cameron, Stephen L; Dowton, Mark

    2013-10-01

    Currently there are ≈ 3000 known species of Sarcophagidae (Diptera), which are classified into 173 genera in three subfamilies. Almost 25% of sarcophagids belong to the genus Sarcophaga (sensu lato) however little is known about the validity of, and relationships between the ≈ 150 (or more) subgenera of Sarcophaga s.l. In this preliminary study, we evaluated the usefulness of three sources of data for resolving relationships between 35 species from 14 Sarcophaga s.l. subgenera: the mitochondrial COI barcode region, ≈ 800 bp of the nuclear gene CAD, and 110 morphological characters. Bayesian, maximum likelihood (ML) and maximum parsimony (MP) analyses were performed on the combined dataset. Much of the tree was only supported by the Bayesian and ML analyses, with the MP tree poorly resolved. The genus Sarcophaga s.l. was resolved as monophyletic in both the Bayesian and ML analyses and strong support was obtained at the species-level. Notably, the only subgenus consistently resolved as monophyletic was Liopygia. The monophyly of and relationships between the remaining Sarcophaga s.l. subgenera sampled remain questionable. We suggest that future phylogenetic studies on the genus Sarcophaga s.l. use combined datasets for analyses. We also advocate the use of additional data and a range of inference strategies to assist with resolving relationships within Sarcophaga s.l.

  1. Morphology of the European species of the aphid genus Eulachnus (Hemiptera: Aphididae: Lachninae) - A SEM comparative and integrative study.

    Science.gov (United States)

    Kanturski, Mariusz; Karcz, Jagna; Wieczorek, Karina

    2015-09-01

    Scanning electron microscopy (SEM) methods were used for the first time to elucidate the external morphology of the European species of the genus Eulachnus (Hemiptera: Aphididae: Lachninae), a representative genus of the conifer-feeding aphids tribe Eulachnini. We examined and compared the external morphology of apterous and alate viviparous females from the parthenogenetic generation as well as oviparous females and alate males belonging to the sexual generation. FE-SEM images based on HMDS and cryo-SEM preparation techniques revealed better image quality than the CPD technique in regard to surface tension and morphological signs of cell deteriorations (i.e., existence of depressions, drying artifacts and membrane blebs). Three morphologically different species groups "agilis", "brevipilosus" and "cembrae" were proposed due to the differences in head, antennae, legs and dorsal chaetotaxy as well as dorsal sclerotization. The most characteristic features and differences of representatives of these groups are presented and discussed.

  2. Cytological study on the genus Syncalathium (Asteraceae-Lactuceae), an endemic taxon to alpine scree of the Sino-Himalayas

    Institute of Scientific and Technical Information of China (English)

    Jian-Wen ZHANG; Ze-Long NIE; Hang SUN

    2009-01-01

    Cytological characters of four species in Syncalathium (Asteraceae: Lactuceae), a small genus with six identified species endemic to alpine scree of the Sino-Himalayan region, are surveyed in this report. Three species ( Syncalathium pilosum, Syncalathium chrysocephalum, and Syncalathium disciforme ) are examined for the first time. Combined with our previous counts, five species have been cytologically investigated from the genus and the results indicated that all species are diploid with the basic somatic chromosome number of x=8. The karyotype asymmetry of Syncalathium souliei is 2A, distinct from the other four species of 1 A, and the remaining species are divided into two subgroups with different karyotypes, consistent with their morphological features. The significance of the cytological evolution of Syncalathium is briefly discussed.

  3. A large-scale study of the Trichinella genus in the golden jackal (Canis aureus) population in Serbia.

    Science.gov (United States)

    Ćirović, Duško; Teodorović, Vlado; Vasilev, Dragan; Marković, Marija; Ćosić, Nada; Dimitrijević, Mirjana; Klun, Ivana; Djurković-Djaković, Olgica

    2015-09-15

    Over the last decades the golden jackal (Canis aureus) has significantly expanded its range throughout Southeast and Central Europe, and the Balkan Peninsula is considered to be a core area of the species distribution in this part of the range. Due to its increasing number, ability of long distance movement through a wide range of landscapes and opportunistic feeding habits, the golden jackal may represent an important reservoir and transmitter of a variety of zoonotic agents, including parasites. The Balkans, Serbia included, remain an endemic area for various zoonotic parasites including Trichinella spp. Trichinella has recently been recorded in jackals in Serbia, which prompted us to carry out a large-scale survey of its prevalence, distribution and species identification in this host. In cooperation with local hunters, carcasses of a total of 738 legally hunted golden jackals were collected at 24 localities over an 11-year period (2003-2013). Analysis of tongue base tissue revealed Trichinella larvae in 122, indicating a prevalence of infection of 16.5%. No difference in the prevalence of infection was found between genders [16.2% in males and 16.9% in females (χ(2)=0.05, p=0.821)], or among the study years (G=7.22, p=0.705). Trichinella larvae were found in 13 out of the 24 examined localities. Molecular identification was performed for 90 isolates, and 64 (71.1%) larvae were identified as Trichinella spiralis and 25 (27.9%) as Trichinella britovi. Mixed infection (T. spiralis and T. britovi) was recorded in a single case. Although T. spiralis was more prevalent, T. britovi had a wider distribution, and was the only recorded species in jackal populations from the mountainous region of eastern Serbia. On the other hand, T. spiralis was dominant in jackals in the lowlands of central and northern Serbia, where domestic pigs are mostly reared. These results show that the golden jackal is involved in both the domestic and sylvatic cycle, and that it has emerged as

  4. Nomenclatural Studies Toward a World List of Diptera Genus-Group Names. Part V: Pierre-Justin-Marie Macquart.

    Science.gov (United States)

    Evenhuis, Neal L; Pape, Thomas; Pont, Adrian C

    2016-09-30

    The Diptera genus-group names of Pierre-Justin-Marie Macquart are reviewed and annotated. A total of 399 available genus-group names in 69 families of Diptera are listed alphabetically, for each name giving author, year and page of original publication, originally included species, type species and method of fixation, current status of the name, family placement, and a list of any emendations of it that have been found in the literature. Remarks are given to clarify nomenclatural or taxonomic information. In addition, an index to all the species-group names of Diptera proposed by Macquart (3,611, of which 3,543 are available) is given with bibliographic reference (year and page) to each original citation.        The following type species are designated herein: Agculocera nigra Macquart, 1855 for Onuxicera Macquart, 1855, present designation [Tachinidae]; Trixa imhoffi Macquart, 1834, for Semiomyia Macquart, 1848, present designation [Tachinidae].        The following type species are designated herein with fixation under ICZN Code Art. 70.3.2: Azelia nebulosa Robineau-Desvoidy, 1830 for Atomogaster Macquart, 1835, present designation [Muscidae]; Tachydromia vocatoria Fallén, 1816 for Chelipoda Macquart, 1835, present designation [Empididae]; Eriocera macquarti Enderlein, 1912 for Eriocera Macquart, 1838, present designation [Limoniidae]; Limosina acutangula Zetterstedt, 1847 for Heteroptera Macquart, 1835, present designation [Sphaeroceridae]; Phryxe pavoniae Robineau-Desvoidy, 1830 for Masicera Macquart, 1834, present designation [Tachinidae]; Pachymyia macquartii Townsend, 1916 for Pachymyia Macquart, 1844, present designation [Tachinidae].        Earlier valid subsequent type-species designations have been found in this study for the following: Anisophysa Macquart, 1835 [Sepsidae]; Diphysa Macquart, 1838 [Stratiomyidae]; Pachyrhina Macquart, 1834 [Tipulidae]; Silbomyia Macquart, 1844 [Calliphoridae].        One name is raised from

  5. A SSR-based composite genetic linkage map for the cultivated peanut (Arachis hypogaea L. genome

    Directory of Open Access Journals (Sweden)

    Li Shaoxiong

    2010-01-01

    Full Text Available Abstract Background The construction of genetic linkage maps for cultivated peanut (Arachis hypogaea L. has and continues to be an important research goal to facilitate quantitative trait locus (QTL analysis and gene tagging for use in a marker-assisted selection in breeding. Even though a few maps have been developed, they were constructed using diploid or interspecific tetraploid populations. The most recently published intra-specific map was constructed from the cross of cultivated peanuts, in which only 135 simple sequence repeat (SSR markers were sparsely populated in 22 linkage groups. The more detailed linkage map with sufficient markers is necessary to be feasible for QTL identification and marker-assisted selection. The objective of this study was to construct a genetic linkage map of cultivated peanut using simple sequence repeat (SSR markers derived primarily from peanut genomic sequences, expressed sequence tags (ESTs, and by "data mining" sequences released in GenBank. Results Three recombinant inbred lines (RILs populations were constructed from three crosses with one common female parental line Yueyou 13, a high yielding Spanish market type. The four parents were screened with 1044 primer pairs designed to amplify SSRs and 901 primer pairs produced clear PCR products. Of the 901 primer pairs, 146, 124 and 64 primer pairs (markers were polymorphic in these populations, respectively, and used in genotyping these RIL populations. Individual linkage maps were constructed from each of the three populations and a composite map based on 93 common loci were created using JoinMap. The composite linkage maps consist of 22 composite linkage groups (LG with 175 SSR markers (including 47 SSRs on the published AA genome maps, representing the 20 chromosomes of A. hypogaea. The total composite map length is 885.4 cM, with an average marker density of 5.8 cM. Segregation distortion in the 3 populations was 23.0%, 13.5% and 7.8% of the markers

  6. Efeitos de reguladores vegetais no desenvolvimento e na produtividade do amendoinzeiro (Arachis hypogaea L. Effects of growth regulators on groundnut development (Arachis hypogaea L.

    Directory of Open Access Journals (Sweden)

    P.R.C. Castro

    1993-09-01

    Full Text Available O trabalho foi realizado com o objetivo de determinar a ação de substâncias de crescimento no desenvolvimento e produtividade do amendoinzeiro, sob condições de casa de vegetação. Plantas de Arachis hypogaea cv. Tatu-53, providas de 4 folhas definitivas, foram pulverizadas com chlormequat 2000 ppm, daminozide 4000 ppm, ácido giberélico 100 ppm, ácido indolilacético 100 ppm, além do controle. Foram determinados: altura das plantas, número de hastes, número de entrenós, comprimento do segundo e quarto entrenós, e o número de folhas. Também foram verificados os números de flores, de frutos e de sementes; peso dos frutos, das sementes, da matéria seca da parte aérea e da matéria seca das raízes do amendoinzeiro. Os resultados obtidos revelaram que daminozide 4000 ppm reduziu a altura, o número de entrenós na haste principal e o comprimento do quarto entrenó. Este produto também aumentou o número de folhas, atrasou a florescência, aumentou o número de flores e tendeu a aumentar o peso seco da parte aérea do amendoinzeiro. Pulverização com chlormequat 2000 ppm e ácido indolilacético 100 ppm, diminuiu a altura da planta e o comprimento do quarto entrenó da haste principal do amendoinzeiro.This research deals with the effects of plant growth regulators on groundnut growth (Arachis hypogaea L. cv. Tatu-53. Plants of groundnut with four leaves grown in pots under greenhouse conditions, were sprayed with chlormequat 2000 ppm, daminozide 4000 ppm, gibberellic acid 100 ppm, indolylacetic acid 100 ppm, mid check treatment. Daminozide 4000 ppm reduced plant height, internode number and the length of the fourth internode. Daminozide increased the number of leaves, retarded flowering, increased the number of flowers and presented a tendency to increase the dry weight of stems. Chlormequat 2000 ppm and indolylacetic acid 100 ppm reduced plant height and the lenght of the fourth internode of the groundnut plant stem.

  7. Taxonomy of the genus Passerina (Thymelaeaceae)

    OpenAIRE

    C. L. Bredenkamp; A. E. van Wyk

    2003-01-01

    Passerina L. is mainly a southern African genus, comprising 20 species and four subspecies. A few species occur along the Great Escarpment, two extend into Zimbabwe and Mozambique, but most are concentrated in the Cape Floristic Region. Palynological. macromorphological and anatomical evidence was used in the delimitation of the genus and its infrageneric taxa. A cladistic study supports Passerina as a monophyletic genus. A genus treatment, key to species and a full species treatment are give...

  8. Identification and characterization of microRNAs from peanut (Arachis hypogaea L. by high-throughput sequencing.

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    Xiaoyuan Chi

    Full Text Available BACKGROUND: MicroRNAs (miRNAs are noncoding RNAs of approximately 21 nt that regulate gene expression in plants post-transcriptionally by endonucleolytic cleavage or translational inhibition. miRNAs play essential roles in numerous developmental and physiological processes and many of them are conserved across species. Extensive studies of miRNAs have been done in a few model plants; however, less is known about the diversity of these regulatory RNAs in peanut (Arachis hypogaea L., one of the most important oilseed crops cultivated worldwide. RESULTS: A library of small RNA from peanut was constructed for deep sequencing. In addition to 126 known miRNAs from 33 families, 25 novel peanut miRNAs were identified. The miRNA* sequences of four novel miRNAs were discovered, providing additional evidence for the existence of miRNAs. Twenty of the novel miRNAs were considered to be species-specific because no homolog has been found for other plant species. qRT-PCR was used to analyze the expression of seven miRNAs in different tissues and in seed at different developmental stages and some showed tissue- and/or growth stage-specific expression. Furthermore, potential targets of these putative miRNAs were predicted on the basis of the sequence homology search. CONCLUSIONS: We have identified large numbers of miRNAs and their related target genes through deep sequencing of a small RNA library. This study of the identification and characterization of miRNAs in peanut can initiate further study on peanut miRNA regulation mechanisms, and help toward a greater understanding of the important roles of miRNAs in peanut.

  9. Notes on the genus Digitaria, with descriptions of new species

    NARCIS (Netherlands)

    Henrard, J.Th.

    1934-01-01

    Some years ago I had the opportunity to study more extensively a very interesting group of grasses, belonging to what is now accepted as a distinct genus, the genus Digitaria, formerly belonging as a subgenus to the genus Panicum. As to living plants of this group I was familiar with two european sp

  10. Redefinition of the genus Triophtydeus Thor, 1932 (Acari: Actinedida)

    NARCIS (Netherlands)

    André, H.M.

    1985-01-01

    The genus Triophtydeus Thor, 1932 is redefined from the study of the type-species, T. triophthalmus (Oudemans, 1929). The genus Metatriophtydeus André, 1980 is a junior synonym of Triophtydeus. Species belonging or likely to belong to the genus Triophtydeus are listed and generic and specific

  11. Influência do Fósforo, Micorriza e Nitrogênio no Conteúdo de Minerais de Brachiaria brizantha e Arachis pintoi Consorciados Effect of Phosphorus, Mycorrhizal and Nitrogen on Mineral Content of Brachiaria brizantha - Arachis pintoi Mixture

    Directory of Open Access Journals (Sweden)

    Ívina Paula Almeida dos Santos

    2002-01-01

    Full Text Available O experimento foi conduzido em casa de vegetação com o objetivo de avaliar a influência do fósforo (P, fungos micorrízicos arbusculares (FMA's e nitrogênio (N no acúmulo de minerais na MS da parte aérea de braquiária MG-4 (Brachiaria brizantha cv. MG-4 e amendoim forrageiro (Arachis pintoi cv. Amarillo consorciados, em solo de baixa fertilidade. O delineamento utilizado foi o inteiramente casualizado, num esquema fatorial 5x2x2, sendo cinco doses de P (25, 50, 75, 100 e 200 mg de P/kg de solo, dois tratamentos de inoculação do solo (inoculado e não com o FMA Glomus etunicatum e dois tratamentos de N (com e sem N em cobertura, com quatro repetições. Foi realizado o corte da parte aérea das plantas aos 60 dias após a germinação para a determinação das quantidades acumuladas de N, P, K, Ca, Mg e S na MS da parte aérea. As adubações fosfatada e, principalmente, a nitrogenada provocaram aumento no conteúdo de N, P, K, Ca, Mg e S na braquiária MG-4, não se verificando tal aumento com a micorrização. No amendoim forrageiro, observou-se redução destes minerais com a aplicação de N, ao passo que a micorrização resultou em aumento dos mesmos. Por outro lado, a adubação fosfatada provocou pequeno aumento no acúmulo de minerais na MS da parte aérea do amendoim forrageiro.This experiment was carried out in a greenhouse condition to study the effect of phosphorus, arbuscular mycorrhizal fungi and nitrogen on mineral accumulation in braquiaria MG-4 (Brachiaria brizantha cv. MG-4 above ground forage DM and peanut (Arachis pintoi cv. Amarillo mixture, in soil of low fertility. The experimental design was a completely randomized in a 5x2x2 factorial arrangement, with five P rates (25, 50, 75, 100 and 200 mg/kg of soil, two inoculations (inoculated and no inoculated and two levels of N (with and without N, with four replicates. The harvest of the above ground parts of plants was at 60 days after seed germination to determine

  12. PEANUT SEEDS CONSERVATION (Arachis hypogaea L. AS A FUNCTION OF CONDITIONING, PACKAGE AND STORAGE ENVIRONMENT CONSERVAÇÃO DE SEMENTES DE AMENDOIM (Arachis hypogaea L. EM FUNÇÃO DO BENEFICIAMENTO, EMBALAGEM E AMBIENTE DE ARMAZENAMENTO

    Directory of Open Access Journals (Sweden)

    Acilon da Silva

    2007-09-01

    Full Text Available

    The aim of this study was to evaluate vigor of peanut seeds (Arachis hypogaea L., cv. BR-1. The experiment was carried out at a seed analysis laboratory and in a greenhouse, in Areia-PB, Brazil, from August, 1998 through September, 1999. The treatments were peanut seeds stored inside and outside the fruit, in two package types (paper and metallic, in four periods (3, 6, 9 and 12 months and two storage conditions (non-controlled environment and dry chamber, 65% UR and 20°C. Moisture and vigor characteristics were evaluated by electrical conductivity (laboratory test, and by seedlings percentage and emergence speed rate at greenhouse. The conclusions were that seeds stored inside the fruits in dry chamber showed high vigor throughout the storage period, independently of the package type used; and, peanut seeds extracted from the fruits, stored in metallic package and kept in non-controlled environment, lost their vigor significantly after six months of storage.

    KEY-WORDS: Conservation; package; vigor.

    O objetivo deste estudo foi avaliar o vigor de sementes de amendoim (Arachis hypogaea L., cultivar BR-1. O experimento foi conduzido em laboratório de análise de sementes e em casa de vegetação, em Areia-PB, Brasil, no período de agosto/ 1998 a setembro/1999. Os tratamentos utilizados foram sementes de amendoim armazenadas dentro e fora dos frutos, em duas embalagens (papel e metálica, quatro períodos (3, 6, 9 e 12 meses e duas condições de armazenamento (ambiente não controlado e câmara seca, 65% UR e 20°C. Foram avaliadas as características de umidade e de vigor através do teste de condutividade elétrica (laboratório, percentagem e índice de velocidade de emergência de plântulas em casa de vegetação. Conclui- se que sementes armazenadas dentro dos frutos

  13. Formation of Biofilms by Foodborne Pathogens and Development of Laboratory In Vitro Model for the Study of Campylobacter Genus Bacteria Based on These Biofilms.

    Science.gov (United States)

    Efimochkina, N R; Bykova, I B; Markova, Yu M; Korotkevich, Yu V; Stetsenko, V V; Minaeva, L P; Sheveleva, S A

    2017-02-01

    We analyzed the formation of biofilms by 7 strains of Campylobacter genus bacteria and 18 strains of Enterobacteriaceae genus bacteria that were isolated from plant and animal raw materials, from finished products, and swabs from the equipment of the food industry. Biofilm formation on glass plates, slides and coverslips, microtubes made of polymeric materials and Petri dishes, and polystyrene plates of different profiles were analyzed. When studying the process of films formation, different effects on bacterial populations were simulated, including variation of growth factor composition of culture media, technique of creating of anaerobiosis, and biocide treatment (active chlorine solutions in a concentration of 100 mg/dm(3)). The formation of biofilms by the studied cultures was assessed by the formation of extracellular matrix stained with aniline dyes on glass and polystyrene surfaces after incubation; 0.1% crystal violet solution was used as the dye. The presence and density of biomatrix were assessed by staining intensity of the surfaces of contact with broth cultures or by optical density of the stained inoculum on a spectrophotometer. Biofilms were formed by 57% Campylobacter strains and 44% Enterobacteriaceae strains. The intensity of the film formation depended on culturing conditions and protocols, species and genus of studied isolates, and largely on adhesion properties of abiotic surfaces. In 30% of Enterobacteriaceae strains, the biofilm formation capacity tended to increase under the influence of chlorine-containing biocide solutions. Thus, we developed and tested under laboratory conditions a plate version of in vitro chromogenic model for evaluation of biofilm formation capacity of C. jejuni strains and studied stress responses to negative environmental factors.

  14. Identifying biases at different spatial and temporal scales of diversification: a case study in the Neotropical parrotlet genus Forpus.

    Science.gov (United States)

    Smith, Brian Tilston; Ribas, Camila C; Whitney, Bret M; Hernández-Baños, Blanca E; Klicka, John

    2013-01-01

    The temporal origins of the extraordinary biodiversity of the Neotropical region are highly debated. Recent empirical work has found support for alternative models on the tempo of speciation in Neotropical species further fuelling the debate. However, relationships within many Neotropical lineages are poorly understood, and it is unclear how this uncertainty impacts inferences on the evolution of taxa in the region. We examined the robustness of diversification patterns in the avian genus Forpus by testing whether the use of different units of biodiversity (i.e. biological species and statistically inferred species) impacted diversification rates and inferences regarding important biogeographic breaks in the genus. We found that the best-fit model of diversification for the biological species data set was a declining rate of diversification; whereas a model of constant diversification was the best-fit model for statistically inferred species or subspecies. Moreover, the relative importance of different landscape features in delimiting genetic structure across the landscape varied across data sets with differing units of biodiversity. Patterns based on divergence times among biological species indicated old speciation events across major geographic and river barriers. In contrast, data sets more inclusive of the diversity in Forpus illustrate the role of both old divergence across major landscape features and more recent divergences that are possibly attributed to Pleistocene climatic changes. Overall, these results indicate that conflicting models on the temporal origins of Neotropical birds may be attributable to sampling biases.

  15. LAS PROTEINAS SEMINALES DEL MANI (ARACHIS HYPOGAEA, LEGUMINOSAE y SU RELACION CON LAS CATEGORIAS INFRAESPECIFICAS

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    N R Grosso

    2010-11-01

    Full Text Available

    Las proteínas seminales de 122 muestras diferentes de Arachis hypogaea L. originarios de Bolivia, Perú y Ecuador fueron estudiadas por electroforesis en gel de poliacrilamida.
    Se detectaron siete bandas constantes y 27 bandas inconstantes. Los resultados de las últimas se utilizaron para analizar las similitudes entre las muestras empleando el coeficiente de Jaccard y el método de ligamiento promedio de la media aritmética no ponderada(UPGMA.
    Las proteínas seminales permitieron separar totalmente la subespecies de A.hypogaea y las variedades en menor medida.

  16. A taxonomic study of the beetle cockroaches (Diploptera Saussure) from China, with notes on the genus and species worldwide (Blattodea: Blaberidae: Diplopterinae).

    Science.gov (United States)

    Li, Xinran; Wang, Zongqing

    2015-09-14

    Four taxa of beetle cockroaches (Diploptera Saussure, 1864) from South China are described and illustrated, viz., two new species D. elliptica sp. n. and D. naevus sp. n., one new subspecies D. nigrescens guani subsp. n. and one widespread known species D. punctata (Eschscholtz, 1822). The genus and known species from around the world are discussed based on types and other specimens. D. pulchra Anisyutkin, 2007 is now regarded as a junior synonym of D. bicolor Hanitsch, 1925. Whether the populations of D. punctata represent or not different species needs to be studied in the future. A key, a distribution map, and photos of species are provided.

  17. Phytochemical, ethnomedicinal uses and pharmacological profile of genus Pistacia.

    Science.gov (United States)

    Rauf, Abdur; Patel, Seema; Uddin, Ghias; Siddiqui, Bina S; Ahmad, Bashir; Muhammad, Naveed; Mabkhot, Yahia N; Hadda, Taibi Ben

    2017-02-01

    Pistacia genus belong to family Anacardiaceae and it is versatile in that its member species have food (P. vera), medicinal (P. lentiscus) and ornamental (P. chinensis) values. Various species of this genus have folkloric uses with credible mention in diverse pharmacopeia. As a trove of phenolic compounds, terpenoids, monoterpenes, flavonoids, alkaloids, saponins, fatty acids, and sterols, this genus has garnered pharmaceutical attention in recent times. With adequate clinical studies, this genus might be exploited for therapy of a multitude of inflammatory diseases, as promised by preliminary studies. In this regard, the ethnomedicinal, phytochemistry, biological potencies, risks, and scopes of Pistacia genus have been reviewed here.

  18. Phylogeny and taxonomy of the genus Gliocephalotrichum

    NARCIS (Netherlands)

    Lombard, L.; Serrato-Diaz, L.M.; Cheewangkoon, R.; French-Monar, R.D.; Decock, C.; Crous, P.W.

    2014-01-01

    Species in the genus Gliocephalotrichum (= Leuconectria) (Hypocreales, Nectriaceae) are soilborne fungi, associated with post-harvest fruit spoilage of several important tropical fruit crops. Contemporary taxonomic studies of these fungi have relied on morphology and DNA sequence comparisons of the

  19. Phylogeny and taxonomy of the genus Gliocephalotrichum

    NARCIS (Netherlands)

    Lombard, L.; Serrato-Diaz, L. M.; Cheewangkoon, R.; French-Monar, R. D.; Decock, C.; Crous, P. W.

    Species in the genus Gliocephalotrichum (= Leuconectria) (Hypocreales, Nectriaceae) are soilborne fungi, associated with post-harvest fruit spoilage of several important tropical fruit crops. Contemporary taxonomic studies of these fungi have relied on morphology and DNA sequence comparisons of the

  20. Phylogeny and taxonomy of the genus Gliocephalotrichum

    NARCIS (Netherlands)

    Lombard, L.; Serrato-Diaz, L.M.; Cheewangkoon, R.; French-Monar, R.D.; Decock, C.; Crous, P.W.

    2014-01-01

    Species in the genus Gliocephalotrichum (= Leuconectria) (Hypocreales, Nectriaceae) are soilborne fungi, associated with post-harvest fruit spoilage of several important tropical fruit crops. Contemporary taxonomic studies of these fungi have relied on morphology and DNA sequence comparisons of the

  1. Genus llex L.: Phytochemistry, Ethnopharmacology, and Pharmacology

    Institute of Scientific and Technical Information of China (English)

    Fan Yi; Xiao-ling Zhao; Yong Peng; Pei-gen Xiao

    2016-01-01

    The genus llex L. has been used as remedies in traditional Chinese medicine in Aquifoliaceae and beverages for thousands of years due to abundant pharmaceutical bioactivities. There are 600 species in genus llex L. containing various compounds such as terpenoids, saponins, glycosides, etc. Three species, I. cornuta, I. chinensis, and I. rotunda have been admitted in Chinese Pharmacopoeia 2015 to treat dyspepsia, stomatitis, and hyperactivity cough and protect the liver and kidney. Recent studies showed that several species have been daily drunk to promote human health and prevent cardiovascular diseases in the folk. Here we reviewed the genus llex L. in phytochemistry, ethnopharmacology, and pharmacology.

  2. A comparative study of the biological properties of venoms from snakes of the genus Vipera (true adders)

    Science.gov (United States)

    Tan, N H; Ponnudurai, G

    1990-01-01

    1. The hemorrhagic, procoagulant, anticoagulant, phosphodiesterase, hyaluronidase, alkaline phosphomonoesterase, 5'-nucleotidase, arginine ester hydrolase, phospholipase A, L-amino acid oxidase and protease activities of 26 samples of venoms of 13 taxa of Vipera were determined and the Sephadex G-75 gel filtration patterns for some of the venoms were also examined. 2. The results indicate the presence of certain common characteristics among the venoms, particularly if V. russelli is excluded from the comparison. The results also support the recently proposed reassignment of V. russelli to a separate genus. 3. The data show that information on venom biological properties can be used for differentiation of venoms of many species of Vipera. Particularly useful for this purpose are the protease, phosphodiesterase, phospholipase A and the procoagulant activities and the Sephadex G-75 gel filtration patterns of the venoms.

  3. A study of the genus Protosticta Selys, 1855, with descriptions of four new species from Vietnam (Odonata: Platystictidae).

    Science.gov (United States)

    Phan, Quoc Toan; Kompier, Tom

    2016-04-07

    The genus Protosticta Selys, 1855 from Vietnam is revised. Four new species, P. ngoai spec. nov., P. socculus spec. nov., P. pseudocuriosa spec. nov., and P. spinosa spec. nov. are described; detailed morphological structures of four species P. beaumonti Wilson, 1997 (dark form), P. caroli van Tol, 2008, P. grandis Asahina, 1995, and P. satoi Asahina, 1997, are provided. P. beaumonti is newly recorded for Vietnam. The female of P. caroli is described for the first time. P. linnaei van Tol, 2008, is also listed here, based on the original description and visual inspection of the type specimens. The occurrence of P. khaosoidaoensis Asahina, 1984, in Vietnam is reviewed and rejected. A total of nine Protosticta species have now been recorded for Vietnam.

  4. Molecular Responses of Groundnut (Arachis hypogea L. to Zinc Stress

    Directory of Open Access Journals (Sweden)

    A. John De Britto

    2013-08-01

    Full Text Available Heavy metals are important environmental pollutants and their toxicity is a problem of increasing significance for ecological, evolutionary and environmental reasons. The interference of germination related proteins by heavy metals has not been well documented at the proteomic and genomic level. In the current study, molecular responses of germinating groundnut seeds were investigated under Zinc stress. The SDS-PAGE showed the preliminary changes in the polypeptides patterns under Zinc stress. Restriction digestion banding pattern of EcoRI and Hind III enzymes showed distinct banding pattern in the treated plants.

  5. Biodiversity of the genus Cladophialophora

    Science.gov (United States)

    Badali, H.; Gueidan, C.; Najafzadeh, M.J.; Bonifaz, A.; van den Ende, A.H.G. Gerrits; de Hoog, G.S.

    2008-01-01

    Cladophialophora is a genus of black yeast-like fungi comprising a number of clinically highly significant species in addition to environmental taxa. The genus has previously been characterized by branched chains of ellipsoidal to fusiform conidia. However, this character was shown to have evolved several times independently in the order Chaetothyriales. On the basis of a multigene phylogeny (nucLSU, nucSSU, RPB1), most of the species of Cladophialophora (including its generic type C. carrionii) belong to a monophyletic group comprising two main clades (carrionii- and bantiana-clades). The genus includes species causing chromoblastomycosis and other skin infections, as well as disseminated and cerebral infections, often in immunocompetent individuals. In the present study, multilocus phylogenetic analyses were combined to a morphological study to characterize phenetically similar Cladophialophora strains. Sequences of the ITS region, partial Translation Elongation Factor 1-α and β-Tubulin genes were analysed for a set of 48 strains. Four novel species were discovered, originating from soft drinks, alkylbenzene-polluted soil, and infected patients. Membership of the both carrionii and bantiana clades might be indicative of potential virulence to humans. PMID:19287540

  6. Biodiversity of the genus Cladophialophora.

    Science.gov (United States)

    Badali, H; Gueidan, C; Najafzadeh, M J; Bonifaz, A; van den Ende, A H G Gerrits; de Hoog, G S

    2008-01-01

    Cladophialophora is a genus of black yeast-like fungi comprising a number of clinically highly significant species in addition to environmental taxa. The genus has previously been characterized by branched chains of ellipsoidal to fusiform conidia. However, this character was shown to have evolved several times independently in the order Chaetothyriales. On the basis of a multigene phylogeny (nucLSU, nucSSU, RPB1), most of the species of Cladophialophora (including its generic type C. carrionii) belong to a monophyletic group comprising two main clades (carrionii- and bantiana-clades). The genus includes species causing chromoblastomycosis and other skin infections, as well as disseminated and cerebral infections, often in immunocompetent individuals. In the present study, multilocus phylogenetic analyses were combined to a morphological study to characterize phenetically similar Cladophialophora strains. Sequences of the ITS region, partial Translation Elongation Factor 1-alpha and beta-Tubulin genes were analysed for a set of 48 strains. Four novel species were discovered, originating from soft drinks, alkylbenzene-polluted soil, and infected patients. Membership of the both carrionii and bantiana clades might be indicative of potential virulence to humans.

  7. Nomenclatural Studies Toward a World List of Diptera Genus-Group Names. Part IV: Charles Henry Tyler Townsend.

    Science.gov (United States)

    Evenhuis, Neal L; Pont, Adrian C; Whitmore, Daniel

    2015-06-25

    The Diptera genus-group names of Charles Henry Tyler Townsend are reviewed and annotated. A total of 1506 available genus-group names in 12 families of Diptera are listed alphabetically for each name, giving author, year and page of original publication, originally included species, type species and method of fixation, current status of the name, family placement, and a list of any emendations of it that have been found in the literature. Remarks are given to clarify nomenclatural and/or taxonomic information. In addition, an index to all the species-group names of Diptera proposed by Townsend (1595, of which 1574 are available names) is given with bibliographic reference (year and page) to each original citation. An appendix with a full bibliography of almost 650 papers written by Townsend is presented with accurate dates of publication.        Two new replacement names are proposed for preoccupied genus-group names and both are named to honor our good friend and colleague, James E. O'Hara, for his decades of work on tachinids: Oharamyia Evenhuis, Pont & Whitmore, n. name, for Lindigia Townsend, 1931 [Tachinidae] (preoccupied by Karsten, 1858); Jimimyia Evenhuis, Pont & Whitmore, n. name, for Siphonopsis Townsend, 1916 [Tachinidae] (preoccupied by Agassiz, 1846).        Earlier dates of availability are found for the following: Eucnephalia Townsend, 1892 [Tachinidae]; Gabanimyia Townsend, 1914 [Tachinidae]; Incamyia Townsend, 1912 [Tachinidae]; Muscopteryx Townsend, 1892 [Tachinidae]; Philippolophosia Townsend, 1927 [Tachinidae]; Pseudokea Townsend, 1927 [Tachinidae].        Corrected or clarified included species and/or corrected or clarified type-species and methods of typification are given for: Alitophasia Townsend, 1934 [Tachinidae]; Almugmyia Townsend, 1911 [Tachinidae]; Arachnidomyia Townsend, 1934 [Sarcophagidae]; Austenina Townsend, 1921 [Glossinidae]; Austrohartigia Townsend, 1937 [Sarcophagidae]; Awatia Townsend, 1921 [Muscidae

  8. Genus Ranges of 4-Regular Rigid Vertex Graphs.

    Science.gov (United States)

    Buck, Dorothy; Dolzhenko, Egor; Jonoska, Nataša; Saito, Masahico; Valencia, Karin

    2015-01-01

    A rigid vertex of a graph is one that has a prescribed cyclic order of its incident edges. We study orientable genus ranges of 4-regular rigid vertex graphs. The (orientable) genus range is a set of genera values over all orientable surfaces into which a graph is embedded cellularly, and the embeddings of rigid vertex graphs are required to preserve the prescribed cyclic order of incident edges at every vertex. The genus ranges of 4-regular rigid vertex graphs are sets of consecutive integers, and we address two questions: which intervals of integers appear as genus ranges of such graphs, and what types of graphs realize a given genus range. For graphs with 2n vertices (n > 1), we prove that all intervals [a, b] for all a genus ranges. For graphs with 2n - 1 vertices (n ≥ 1), we prove that all intervals [a, b] for all a genus ranges. We also provide constructions of graphs that realize these ranges.

  9. Taxonomy of the genus Passerina (Thymelaeaceae

    Directory of Open Access Journals (Sweden)

    C. L. Bredenkamp

    2003-12-01

    Full Text Available Passerina L. is mainly a southern African genus, comprising 20 species and four subspecies. A few species occur along the Great Escarpment, two extend into Zimbabwe and Mozambique, but most are concentrated in the Cape Floristic Region. Palynological. macromorphological and anatomical evidence was used in the delimitation of the genus and its infrageneric taxa. A cladistic study supports Passerina as a monophyletic genus. A genus treatment, key to species and a full species treatment are given. Each species treatment includes a taxonomic diagnosis, description and notes on taxonomy, etymology, economic value and distribution. Illustrations of representative species are provided and distribution maps are included for each species.  P. esterhuyseniae Bredenk. & A.E.van Wyk is newly described. A list of excluded species names highlights the previous cosmopolitan taxonomic interpretation of Passerina. as many names are now in synony my under other genera of the Thymelaeaceae.

  10. Taxonomy of the genus Passerina (Thymelaeaceae

    Directory of Open Access Journals (Sweden)

    C. L. Bredenkamp

    2003-12-01

    Full Text Available Passerina L. is mainly a southern African genus, comprising 20 species and four subspecies. A few species occur along the Great Escarpment, two extend into Zimbabwe and Mozambique, but most are concentrated in the Cape Floristic Region. Palynological. macromorphological and anatomical evidence was used in the delimitation of the genus and its infrageneric taxa. A cladistic study supports Passerina as a monophyletic genus. A genus treatment, key to species and a full species treatment are given. Each species treatment includes a taxonomic diagnosis, description and notes on taxonomy, etymology, economic value and distribution. Illustrations of representative species are provided and distribution maps are included for each species.  P. esterhuyseniae Bredenk. & A.E.van Wyk is newly described. A list of excluded species names highlights the previous cosmopolitan taxonomic interpretation of Passerina. as many names are now in synony my under other genera of the Thymelaeaceae.

  11. The genus Cladosporium

    NARCIS (Netherlands)

    Bench, K.; Braun, U.; Groenewald, J.Z.; Crous, P.W.

    2012-01-01

    A monographic revision of the hyphomycete genus Cladosporium s. lat. (Cladosporiaceae, Capnodiales) is presented. It includes a detailed historic overview of Cladosporium and allied genera, with notes on their phylogeny, systematics and ecology. True species of Cladosporium s. str. (anamorphs of Dav

  12. The genus Lagenophora (Compositae)

    NARCIS (Netherlands)

    Cabrera, Angel L.

    1966-01-01

    The genus Lagenophora was first described by Cassini under the name Lagenifera (in Bull. Soc. Philomat. 12, 1816, 199) with the following diagnosis: ‘Ce genre, de la tribus des astérées, comprend le calendula magellanicá, Willd. et le bellis stipitata, Labill. Son principal caractère reside dans la

  13. The genus Cladosporium

    NARCIS (Netherlands)

    Bench, K.; Braun, U.; Groenewald, J.Z.; Crous, P.W.

    2012-01-01

    A monographic revision of the hyphomycete genus Cladosporium s. lat. (Cladosporiaceae, Capnodiales) is presented. It includes a detailed historic overview of Cladosporium and allied genera, with notes on their phylogeny, systematics and ecology. True species of Cladosporium s. str. (anamorphs of

  14. The genus Lagenophora (Compositae)

    NARCIS (Netherlands)

    Cabrera, Angel L.

    1966-01-01

    The genus Lagenophora was first described by Cassini under the name Lagenifera (in Bull. Soc. Philomat. 12, 1816, 199) with the following diagnosis: ‘Ce genre, de la tribus des astérées, comprend le calendula magellanicá, Willd. et le bellis stipitata, Labill. Son principal caractère reside dans la

  15. The genus Faradaya (Labiatae)

    NARCIS (Netherlands)

    Kok, de R.P.J.; Mabberley, D.J.

    1999-01-01

    A revision of the genus Faradaya F. Muell. (Labiatae) is presented with taxonomic history, keys, full descriptions, distribution maps and ecological and ethnobotanical notes. Only three species are recognised: F. amicorum (Seem.) Seem., F. lehuntei (Home ex Baker) A.C. Sm. and F. splendida F. Muell.

  16. The amphipod genus Acidostoma

    NARCIS (Netherlands)

    Dahl, E.

    1964-01-01

    The genus Acidostoma was established by Lilljeborg (1865, p. 24) to receive Anonyx obesus Sp. Bate (1862, p. 74). Afterwards two further species have been added, viz. A. laticorne G. O. Sars (1879, p. 440) and A. nodiferum Stephensen (1923, p. 40). In the present paper it will be shown that A. latic

  17. Desenvolvimento dos frutos nas espécies selvagens de amendoim (Arachis spp. Fruit development in wild species of peanut

    Directory of Open Access Journals (Sweden)

    Cândida H. T. Mendes Conagin

    1959-01-01

    Full Text Available As espécies selvagens de amendoim apresentam frutos completamente diferentes dos frutos do amendoim cultivado (Arachis hypogaea L.. Nesta espécie os frutos têm duas a cinco sementes justapostas dentro de uma única loja; externamente são observadas constrições na casca do fruto as quais em alguns casos se acentuam não chegando, entretanto, a produzir unia separação entre as sementes. Nas espécies selvagens os frutos apresentam duas sementes apenas, completamente separadas uma da outra por uma constrição muito profunda ou mesmo por um istmo de comprimento variável. Para êsses frutos foi adotada a denominação de "frutos catenados" e o estudo de seu desenvolvimento foi feito nas espécies Arachis monticola Krapovickas et Rigoni e A. villosa Benth. var. correntina Burk. O ovário, unilocular, tem normalmente dois óvulos. A futura separação das duas sementes se origina num tecido intercalar que se forma em ovários ainda jovens e que separa em duas a cavidade inicial única. Êste tecido tem a estrutura de um "peg" e, como êle, desidrata-se durante o processo de amadurecimento do fruto, tomando-se sêco e quebradiço; por essa razão, ao colhêr os frutos, a maioria dêles se apresenta unisseminado. Em 50% dos casos os óvulos se desenvolvem igualmente, conduzindo à formação de frutos com duas sementes. Quando os dois óvulos não se desenvolvem ao mesmo tempo, é mais freqüente o colapso do óvulo apical, cujo crescimento é paralisado cm diversos estados de desenvolvimento; isto conduz à formação de frutos com apenas uma semente ou com uma semente abortada. Além dessas duas, as seguintes espécies apresentam frutos catenados: Arachis Diogoi Hoehne f. typica Hoehne, A. glabrata Benth., A. pusilla Benth., A. marginata Gardn. (segundo Burkart, A. prostrata Benth. (segundo Burkart, e mais três espécies ainda não identificadas, mas que constam da coleção da Seção de Citologia como V. 44, V. 82 e V. 85. A V. 44 deve

  18. Eficiência reprodutiva no amendoim cultivado (Arachis hypogaea L. Reproductive efficiency in the peanut (Arachis hypogaea L.

    Directory of Open Access Journals (Sweden)

    Cândida H. T. Mendes Conagin

    1960-01-01

    Full Text Available Cinco variedades de amendoim, abrangendo os três tipos vegetativos conhecidos, foram comparadas quanto à sua eficiência reprodutiva. Para conhecer o resultado final de porcentagem de frutos e sementes, foram estudadas a quantidade de flôres, a duração e as oscilações do florescimento; a formação de frutos e sementes também foi estudada com detalhes. Tendo variado o número de plantas observadas nos diversos itens, em diversos anos, tôdas as informações foram referidas a "uma planta" para poderem ser comparadas quando necessário. O período útil de florescimento dura as dez semanas medianas do ciclo vegetativo da planta, o máximo de flôres sendo atingido na 10.ª semana dêsse ciclo. Há, entretanto, a observar, que as variedades eretas são mais precoces do que as de porte decumbente; o florescimento apresenta bruscas oscilações diárias. É a variedade Tatuí a que produz mais flôres por planta, tendo, entretanto, a mais baixa eficiência reprodutiva. As outras variedades têm eficiência mais alta, mas, mesmo assim, ela é surpreendentemente baixa, em se tratando de uma planta de grande florescimento como é o amendoim. As informações obtidas nestes ensaios são fundamentais para qualquer trabalho de melhoramento por hibridação e já estão sendo utilizadas nos atuais cruzamentos, feitos pela Seção de Citologia.A study of the reproductive efficiency of five agronomical varieties of peanut was made. Determinations were made of fruit and seed percentages in relation to number of flowers procured, length of flowering period, alternation of high and low daily flower frequencies, and number of flowers which had no chance to become fruit?. Data obtained supported lhe following conclusions: (a Varieties of the erect vegetative type were early; they began and ended their vegetative am! flowering cycles before those of the decumbent type. (b The flowering curves showed an abrupt alternation of high and low frequencies. (c The

  19. Produção e qualidade de massa de forragem nos estratos da cultivar coastcross-1 consorciada com Arachis pintoi com e sem adubação nitrogenada = Forage mass production and quality in coastcross-1 pasture layers, mixed with Arachis pintoi with or without nitrogen fertilization

    Directory of Open Access Journals (Sweden)

    2008-04-01

    Full Text Available Neste trabalho, objetivou-se avaliar a massa de forragem nas frações lâminas foliares (LF, bainha + colmo verde (BCV, material morto (MM e seus teores de proteína bruta (PB e fibra em detergente neutro (FDN nos estratos de 0 a 7 cm, 7 a 14 cm e acima de 14 cm de altura da cultivar Coastcross-1 e planta inteira de Arachis pintoi (AP em pastejo, de março de 2003 a março de 2004. Estudaram-se os efeitos dos tratamentos CA0 = Coastcross-1 + Arachis sem N; CA100 = Coastcross-1 + Arachis com 100 kg de N; CA200 = Coastcross-1 + Arachis com 200 kg de N e C200 = Coastcross-1 com 200 kg deN, em um delineamento em blocos ao acaso, com duas repetições. O método de pastejo foi contínuo e a taxa de lotação, variável. As proporções de LF da gramínea Coastcross-1 aumentaram e de BCV, MM e AP diminuíram com o aumento da altura. Não foram observadas diferenças entre os tratamentos. A planta inteira da leguminosa Arachis teve pouca influência na composição da pastagem pela sua baixa disponibilidade. Os maiores (p This trial was carried out to evaluate forage mass in fraction leaf blade (LB, sheath + green stem (SGS, dead material (DE, and crude protein (CP percentage and neutral detergent fiber (NDF in thelayers of 0 to 7 cm, 7 to 14 cm and over 14 cm high. Coastcross-1 grass and the whole plant of Arachis pintoi (WPA were evaluated under grazing, from March 2003 to March 2004. The treatments evaluated were CA0 = Coastcross-1 + Arachis without N; CA100= Coastcross-1 + Arachis with 100 kg of N; CA200 = Coastcross-1 + Arachis with 200 kg of N; and C200 = Coastcross-1 with 200 kg of N, in a random block design, with two repetitions. The proportion of LB and SGS increased, while DE and WPA decreased with the increase of clipping height. No difference was observed among treatments. Arachis had little influence on pasture composition because of its low availability. The highest values (p < 0.05 for CP and the lowest values for NDF were observed in

  20. Comparative study of the strategies evolved by two parasitoids of the genus Asobara to avoid the immune response of the host, Drosophila melanogaster.

    Science.gov (United States)

    Moreau, Sébastien J M; Eslin, Patrice; Giordanengo, Philippe; Doury, Géraldine

    2003-04-01

    Asobara tabida and Asobara citri are two braconid endoparasitoids of Drosophila melanogaster larvae. We studied and compared the strategies evolved by these two species to avoid the immune reaction of their host. A. tabida has no negative impact on host cellular defenses and its eggs avoid encapsulation by adhering to host tissues. At the opposite, we found that A. citri, whose eggs are devoid of adhesive properties, affects the host encapsulation abilities, hemolymph phenoloxidase activity and concentrations of circulating hemocytes. Some of these effects could directly rely on a severe disruption of the hematopoietic organ anterior lobes observed in parasitized larvae. This is the first report of the immune suppressive abilities of a parasitoid from the Asobara genus. Results are presented and discussed with respect to the strategies of virulence evolved by other parasitoids to counteract the D. melanogaster immune system.

  1. Identification of genes differentially expressed during early interactions between the stem rot fungus (Sclerotium rolfsii) and peanut (Arachis hypogaea) cultivars with increasing disease resistance levels.

    Science.gov (United States)

    Jogi, Ansuya; Kerry, John W; Brenneman, Timothy B; Leebens-Mack, James H; Gold, Scott E

    2016-03-01

    Sclerotium rolfsii, a destructive soil-borne fungal pathogen causes stem rot of the cultivated peanut, Arachis hypogaea. This study aimed to identify differentially expressed genes associated with peanut resistance and fungal virulence. Four peanut cultivars (A100-32, Georgia Green, GA-07W and York) with increasing resistance levels were inoculated with a virulent S. rolfsii strain to study the early plant-pathogen interaction. 454 sequencing was performed on RNAs from infected tissue collected at 4 days post inoculation, generating 225,793 high-quality reads. Normalized read counts and fold changes were calculated and statistical analysis used to identify differentially expressed genes. Several genes identified as differential in the RNA-seq experiment were selected based on functions of interest and real-time PCR employed to corroborate their differential expression. Expanding the analysis to include all four cultivars revealed a small but interesting set of genes showing colinearity between cultivar resistance and expression levels. This study identified a set of genes possibly related to pathogen response that may be useful marker assisted selection or transgenic disease control strategies. Additionally, a set of differentially expressed genes that have not been functionally characterized in peanut or other plants and warrant additional investigation were identified.

  2. Exponentially many maximum genus embeddings and genus embeddings for complete graphs

    Institute of Scientific and Technical Information of China (English)

    REN Han; BAI Yun

    2008-01-01

    There are many results on the maximum genus,among which most are written for the existence of values of such embeddings,and few attention has been paid to the estimation of such embeddings and their applications.In this paper we study the number of maximum genus embeddings for a graph and find an exponential lower bound for such numbers.Our results show that in general case,a simple connected graph has exponentially many distinct maximum genus embeddings.In particular,a connected cubie graph G of order n always has at least (√2)m+n+α/2 distinct maximum genus embeddings,where α and m denote,respectively,the number of inner vertices and odd compo-nents of an optimal tree T.What surprise us most is that such two extremal embeddings (i.e.,the maximum genus embeddings and the genus embeddings) are sometimes closely related with each other.In fact,as applications,we show that for a sufficient large natural number n,there are at least C2n/4 many genus embeddings for complete graph Kn with n=4,7,10 (mod12),where C is a constance depending on the Value of n of residue 12.These results improve the bounds obtained by Korzhik and Voss and the methods used here are much simpler and straight.

  3. Evaluation of Different Groundnut Arachis hypogea L. Cultivars Against Termites, Odontotermes obesus (Rambur in Rawalpindi, Pakistan

    Directory of Open Access Journals (Sweden)

    Muhammad Usman Malik

    2015-03-01

    Full Text Available Six groundnut (Arachis hypogea L. cultivars i.e. Golden, BARI-2000, Australian, BARD-479, ICG-7326 and 2KCGC20 were evaluated against the attack of Odontotermes obesus in terms of percentage infestation of workers and soldiers, their damage and impact on the yield. The maximum mean populations of O. obesus workers were recorded on 2KCGC20 (30.82±2.75 workers/plot and Australian (30.65±2.92 workers/plot, followed by BARI 2000 (19.55±2.51 workers/plot, Golden (17.30±2.27 workers/plot and BARD-479 (16.82±2.06 workers/plot. The minimum mean population of O. obesus workers was found on ICG-7326 cultivars (14.85±1.81 workers/plot. The maximum mean population infestation of O. obesus soldiers was recorded on 2KCGC20 cultivar (4.88±0.25 soldiers/plot followed by Australian (4.15±.30, soldiers/per plot, BARD-479 (2.00±.17 soldiers/plot, ICG-7326 (1.70±.14 soldiers/plot, BARD 2000 (2.40±.25 soldiers/ plot. The minimum mean population of O. obesus soldiers was found on Gold (1.87±.17 soldiers/plot. Population of O. obesus workers was positively related with the damage and negatively related the yield in all the groundnut cultivars.

  4. Genetic analysis of some agronomic traits in groundnut (Arachis hypogaea L.

    Directory of Open Access Journals (Sweden)

    M.K. Alam

    2013-12-01

    Full Text Available A 10×10 half diallel experiment was conducted on groundnut (Arachis hypogaea L. to ascertain the gene action and genetic parameters of ten traits including 50% flowering, no. of pods per plant, plant height, harvest index, pod index, 100 pod weight, 100 kernel weight, pod size, diseases infection and yield per plot. The experiments were carried out in the Department of Genetics and Plant Breeding, Bangladesh Agricultural University (BAU, Mymensingh during the cropping season of 2010-2011. The estimates of gene effects indicated that significance of both additive and non-additive variance for pod size, 100 pod weight and diseases infection among the traits and presence of over dominance satisfying assumptions of diallel except dormancy. However, both the additive and non-additive gene affects together importance to control of most quantitative traits in the groundnut. The average degree of dominance (H1/D 1/2 (H1 = dominance variance, D = additive variance was higher than one, indicating over dominance for all the traits. The narrow-sense heritability was high for 50% flowering (38%, harvest index (35%, pod size (52%, 100 pod weight (35% and yield per plot (41% indicating that great genetic gain could be achieved for them.

  5. (Glossoscolecidae y Acanthodrilidae y leguminosas (Arachis pintoi en un suelo de traspatio

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    Esperanza Huerta

    2007-01-01

    Full Text Available En el sureste de la República Mexicana, en el trópico húmedo, se llevó a cabo un estudio en un cultivo de traspatio (huerto familiar con el fin de aumentar la fertilidad del suelo mediante la reproducción e inoculación de individuos de las especies Glossoscolecidae sp y Dichogaster saliens (oligochaeta las cuales tuvieron la mayor tasa de crecimiento diario (3 mg día-1 en sustratos con 1.5 % Mucuna pruriens var. utilis (leguminosa. Cuatro tratamientos con seis repeticiones de 3 x 2 m cada una fueron instalados en el huerto familiar. El contenido de materia orgánica (5.45 ± 1.6%, nitrógeno total (0.27 ± 0.05%, fósforo disponible (40.6 ± 22.5 mg kg-1 y potasio (1.05 ± 0.88 mg kg-1 fueron significativamente superiores (p < 0.05 en aquellas unidades experimentales con lombrices (27 gm-2 en conjunto con Arachis pintoi.

  6. Chlorophyll and carbohydrates in Arachis pintoi plants under influence of water regimes and nitrogen fertilization

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    Rita Manuele Porto Sales

    2013-06-01

    Full Text Available In this experiment the chlorophyll and carbohydrate contents of Arachis pintoi were evaluated to verify if the presence of nitrogen in the soil could contribute to the effectiveness of the establishment of this legume. The design was completely randomized, in a 4 × 4 factorial arrangement, with four N rates (0, 40, 80 and 120 kg ha-1 and four irrigation levels (25, 50, 75 and 100% of field capacity, with four replications. The biochemical evaluations of chlorophylls a and b and total chlorophyll and total soluble sugars, sucrose and starch were performed. The highest contents of chlorophyll a and b and total chlorophyll in leaves were found at the dose of 120 kg ha-1. The water regime of 25% of field capacity was responsible for the lowest content of reducing sugars and total soluble sugars in leaves, stolons and roots. In the roots, the sucrose contents were higher in these conditions, which can be associated with a slight tolerance of the plant to water stress. The water deficiency was responsible for the decrease of reducing sugars and total N in the whole plant and positively influenced the levels of chlorophyll and sugars in the stolon, promoting growth, especially of shoots, at the beginning of establishment.

  7. Diallel Anaysis of Oil Production Components in Peanut (Arachis hypogaea L.

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    Jeffrey N. Wilson

    2013-01-01

    Full Text Available Peanut (Arachis hypogaea L. has the potential to become a major source of biodiesel, but for market viability, peanut oil yields must increase. Oil yield in peanut is influenced by many different components, including oil concentration, seed mass, and mean oil produced per seed. All of these traits can potentially be improved through selection as long as there is sufficient genetic variation. To assess the variation for these traits, a diallel mating design was used to estimate general combining ability, specific combining ability, and heritability. General combining ability estimates were significant for oil concentration, weight of 50 sound mature kernels (50 SMK, and mean milligrams oil produced per SMK (OPS. Specific combining ability was significant for oil concentration. Reciprocal effects were detected for OPS. Narrow-sense heritability estimates were very high for oil concentration and 50 SMK and low for OPS. The low OPS heritability estimate was caused by the negative correlation between oil concentration and seed size. Consequently, oil concentration and seed mass alone can be improved through early generation selection, but large segregating populations from high oil crosses will be needed to identify progeny with elevated oil concentrations that maintain acceptable seed sizes.

  8. Fibre degradability of oil palm frond pellet, supplemented with Arachis pintoi in cattle

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    Bodee Khamseekhiew

    2002-04-01

    Full Text Available An experiment was conducted to evaluate the effect of different levels of Arachis pintoi (AP supplementation on rumen environment [(rumen pH, ruminal ammonia nitrogen (NH3N and volatile fatty acids (VFAs concentration] and degradability of oil palm frond (OPF. Three Kedah-Kelantan (KK cattle of about 2 1/2 years of age with an average body weight (BW173±17.2 kg, each fitted with a ruminal cannula, were used. The cattle were kept in individual pens and fed the treatment diets at 1.5% of BW. The diets comprised the following four OPF:AP ratios; 80:20 (L20, 70:30 (L30, 60:40 (L40, 50:50 (L50 in a 4 × 4 incomplete Latin Square Design. The DM an NDF degradation rates of OPF were significantly affected by AP supplementation. Ruminal pH was not significantly different (p>0.05 among the four different diets. The concentration of NH3N was significantly (p<0.05 higher in cattle fed L50 than those in L40, L30 and L20. Similarly, increasing levels of AP supplementation significantly increased the total VFAs concentration from 59.9 mmol/L for L20 to 69.2 mmol/L for L50. It is suggested that AP can be used as a protein supplement to improve fibre degradability of OPF in cattle.

  9. 海洋Penicillium属化学成分与生物活性的研究%Study on chemical composition and bioactivity of marine penicillium genus

    Institute of Scientific and Technical Information of China (English)

    余玥; 林文翰

    2011-01-01

    Marine microorganisms have a large quantity and variety; the metabolites are diverse with peculiar configurations, many of which have fair activities. Because of the particularity of marine environment, marine microorganisms have developed a unique metabolic pathway of their own, and brought in a large number of new types of metabolites that have never been seen in the land microorganisms. Penicilliums form a unique metabolic pathway in the marine environment, and its bioactivities and structure classifications differ a lot from that of land penicilliums genus. In this paper, brief reviews of recent studies on penicilliums genus separated from the marine were provided according to the structure type of metabolites.%海洋微生物数量大,种类多,代谢产物多样化,构型奇特,很多具有很好的活性.由于海洋环境的特殊性,海洋微生物发展出其独特的代谢方式,有很多陆地微生物所未遇见过的新型代谢产物.青霉菌在海洋环境中被造就其独特的代谢方式,其生物活性与结构类别都与陆地青霉菌属有很大差异.根据化合物结构类型阐述了近年来在海洋中分离得到的青霉菌属代谢产物的研究概况.

  10. Genomic diversity within the haloalkaliphilic genus Thioalkalivibrio

    Science.gov (United States)

    Ahn, Anne-Catherine; Meier-Kolthoff, Jan P.; Overmars, Lex; Richter, Michael; Woyke, Tanja; Sorokin, Dimitry Y.

    2017-01-01

    Thioalkalivibrio is a genus of obligate chemolithoautotrophic haloalkaliphilic sulfur-oxidizing bacteria. Their habitat are soda lakes which are dual extreme environments with a pH range from 9.5 to 11 and salt concentrations up to saturation. More than 100 strains of this genus have been isolated from various soda lakes all over the world, but only ten species have been effectively described yet. Therefore, the assignment of the remaining strains to either existing or novel species is important and will further elucidate their genomic diversity as well as give a better general understanding of this genus. Recently, the genomes of 76 Thioalkalivibrio strains were sequenced. On these, we applied different methods including (i) 16S rRNA gene sequence analysis, (ii) Multilocus Sequence Analysis (MLSA) based on eight housekeeping genes, (iii) Average Nucleotide Identity based on BLAST (ANIb) and MUMmer (ANIm), (iv) Tetranucleotide frequency correlation coefficients (TETRA), (v) digital DNA:DNA hybridization (dDDH) as well as (vi) nucleotide- and amino acid-based Genome BLAST Distance Phylogeny (GBDP) analyses. We detected a high genomic diversity by revealing 15 new “genomic” species and 16 new “genomic” subspecies in addition to the ten already described species. Phylogenetic and phylogenomic analyses showed that the genus is not monophyletic, because four strains were clearly separated from the other Thioalkalivibrio by type strains from other genera. Therefore, it is recommended to classify the latter group as a novel genus. The biogeographic distribution of Thioalkalivibrio suggested that the different “genomic” species can be classified as candidate disjunct or candidate endemic species. This study is a detailed genome-based classification and identification of members within the genus Thioalkalivibrio. However, future phenotypical and chemotaxonomical studies will be needed for a full species description of this genus. PMID:28282461

  11. Genomic diversity within the haloalkaliphilic genus Thioalkalivibrio.

    Science.gov (United States)

    Ahn, Anne-Catherine; Meier-Kolthoff, Jan P; Overmars, Lex; Richter, Michael; Woyke, Tanja; Sorokin, Dimitry Y; Muyzer, Gerard

    2017-01-01

    Thioalkalivibrio is a genus of obligate chemolithoautotrophic haloalkaliphilic sulfur-oxidizing bacteria. Their habitat are soda lakes which are dual extreme environments with a pH range from 9.5 to 11 and salt concentrations up to saturation. More than 100 strains of this genus have been isolated from various soda lakes all over the world, but only ten species have been effectively described yet. Therefore, the assignment of the remaining strains to either existing or novel species is important and will further elucidate their genomic diversity as well as give a better general understanding of this genus. Recently, the genomes of 76 Thioalkalivibrio strains were sequenced. On these, we applied different methods including (i) 16S rRNA gene sequence analysis, (ii) Multilocus Sequence Analysis (MLSA) based on eight housekeeping genes, (iii) Average Nucleotide Identity based on BLAST (ANIb) and MUMmer (ANIm), (iv) Tetranucleotide frequency correlation coefficients (TETRA), (v) digital DNA:DNA hybridization (dDDH) as well as (vi) nucleotide- and amino acid-based Genome BLAST Distance Phylogeny (GBDP) analyses. We detected a high genomic diversity by revealing 15 new "genomic" species and 16 new "genomic" subspecies in addition to the ten already described species. Phylogenetic and phylogenomic analyses showed that the genus is not monophyletic, because four strains were clearly separated from the other Thioalkalivibrio by type strains from other genera. Therefore, it is recommended to classify the latter group as a novel genus. The biogeographic distribution of Thioalkalivibrio suggested that the different "genomic" species can be classified as candidate disjunct or candidate endemic species. This study is a detailed genome-based classification and identification of members within the genus Thioalkalivibrio. However, future phenotypical and chemotaxonomical studies will be needed for a full species description of this genus.

  12. Chemodiversity in the genus Aspergillus.

    Science.gov (United States)

    Frisvad, Jens C; Larsen, Thomas O

    2015-10-01

    Isolates of Aspergillus species are able to produce a large number of secondary metabolites. The profiles of biosynthetic families of secondary metabolites are species specific, whereas individual secondary metabolite families can occur in other species, even those phylogenetically and ecologically unrelated to Aspergillus. Furthermore, there is a high degree of chemo-consistency from isolate to isolate in a species even though certain metabolite gene clusters are silenced in some isolates. Genome sequencing projects have shown that the diversity of secondary metabolites is much larger in each species than previously thought. The potential of finding even further new bioactive drug candidates in Aspergillus is evident, despite the fact that many secondary metabolites have already been structure elucidated and chemotaxonomic studies have shown that many new secondary metabolites have yet to be characterized. The genus Aspergillus is cladistically holophyletic but phenotypically polythetic and very diverse and is associated to quite different sexual states. Following the one fungus one name system, the genus Aspergillus is restricted to a holophyletic clade that include the morphologically different genera Aspergillus, Dichotomomyces, Phialosimplex, Polypaecilum and Cristaspora. Secondary metabolites common between the subgenera and sections of Aspergillus are surprisingly few, but many metabolites are common to a majority of species within the sections. We call small molecule extrolites in the same biosynthetic family isoextrolites. However, it appears that secondary metabolites from one Aspergillus section have analogous metabolites in other sections (here also called heteroisoextrolites). In this review, we give a genus-wide overview of secondary metabolite production in Aspergillus species. Extrolites appear to have evolved because of ecological challenges rather than being inherited from ancestral species, at least when comparing the species in the different

  13. Comparative Genomics Reveals High Genomic Diversity in the Genus Photobacterium

    OpenAIRE

    Henrique Machado; Lone Gram

    2017-01-01

    Vibrionaceae is a large marine bacterial family, which can constitute up to 50% of the prokaryotic population in marine waters. Photobacterium is the second largest genus in the family and we used comparative genomics on 35 strains representing 16 of the 28 species described so far, to understand the genomic diversity present in the Photobacterium genus. Such understanding is important for ecophysiology studies of the genus. We used whole genome sequences to evaluate phylogenetic relationship...

  14. Pretreatment optimization, process control, mass and energy balances and economics of anaerobic co-digestion of Arachis hypogaea (Peanut) hull and poultry manure.

    Science.gov (United States)

    Dahunsi, S O; Oranusi, S; Efeovbokhan, V E

    2017-10-01

    The study explored biogas production from the co-digestion of Arachis hypogaea hull and poultry droppings. Mechanical and thermo-alkaline pretreatments were applied to a sample of the mixture. Another sample was treated mechanically but without thermo-alkaline methods. Optimization was done using the Response Surface Methodology (RSM) and the Artificial Neural Networks (ANNs). The optimal values for each of the five major parameters optimized are Temperature of 32.00°C, pH of 7.62, Retention time of 30.00 day, Total solids of 12.00g/kg and Volatile solids of 10.00g/kg and the predicted biogas yield for RSM was 3903.1510(-3)m(3)/kg TSfed and 3338.310(-3)m(3)/kg TSfed for ANNs in the thermo-alkaline pretreated experiment. Gas chromatography show the CH4 and CO2 content of biogas generated to be 65.5±1.5%; 26±1% and 53±1%; 26±2% respectively. The co-digestion of peanut hull with poultry droppings and other energy-yielding substrates is further encouraged. Copyright © 2017 Elsevier Ltd. All rights reserved.

  15. An oxidative burst and its attenuation by bacterial peroxidase activity is required for optimal establishment of the Arachis hypogaea-Bradyrhizobium sp. symbiosis.

    Science.gov (United States)

    Muñoz, V; Ibáñez, F; Figueredo, M S; Fabra, A

    2016-07-01

    The main purpose of this study was to determine whether the Arachis hypogaea L. root oxidative burst, produced at early stages of its symbiotic interaction with Bradyrhizobium sp. SEMIA 6144, and the bacterial antioxidant system are required for the successful development of this interaction. Pharmacological approaches were used to reduce both plant oxidative burst and bacterial peroxidase enzyme activity. In plants whose H2 O2 levels were decreased, a low nodule number, a reduction in the proportion of red nodules (%) and an increase in the bacteroid density were found. The symbiotic phenotype of plants inoculated with a Bradyrhizobium sp. SEMIA 6144 culture showing decreased peroxidase activity was also affected, since the biomass production, nodule number and percentage of red nodules in these plants were lower than in plants inoculated with Bradyrhizobium sp. control cultures. We demonstrated for the first time that the oxidative burst triggered at the early events of the symbiotic interaction in peanut, is a prerequisite for the efficient development of root nodules, and that the antioxidant system of bradyrhizobial peanut symbionts, particularly the activity of peroxidases, is counteracting this oxidative burst for the successful establishment of the symbiosis. Our results provide new insights into the mechanisms involved in the development of the symbiotic interaction established in A. hypogaea L. a legume infected in an intercellular way. © 2016 The Society for Applied Microbiology.

  16. Transcriptome Sequencing of Diverse Peanut (Arachis Wild Species and the Cultivated Species Reveals a Wealth of Untapped Genetic Variability

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    Ratan Chopra

    2016-12-01

    Full Text Available To test the hypothesis that the cultivated peanut species possesses almost no molecular variability, we sequenced a diverse panel of 22 Arachis accessions representing Arachis hypogaea botanical classes, A-, B-, and K- genome diploids, a synthetic amphidiploid, and a tetraploid wild species. RNASeq was performed on pools of three tissues, and de novo assembly was performed. Realignment of individual accession reads to transcripts of the cultivar OLin identified 306,820 biallelic SNPs. Among 10 naturally occurring tetraploid accessions, 40,382 unique homozygous SNPs were identified in 14,719 contigs. In eight diploid accessions, 291,115 unique SNPs were identified in 26,320 contigs. The average SNP rate among the 10 cultivated tetraploids was 0.5, and among eight diploids was 9.2 per 1000 bp. Diversity analysis indicated grouping of diploids according to genome classification, and cultivated tetraploids by subspecies. Cluster analysis of variants indicated that sequences of B genome species were the most similar to the tetraploids, and the next closest diploid accession belonged to the A genome species. A subset of 66 SNPs selected from the dataset was validated; of 782 SNP calls, 636 (81.32% were confirmed using an allele-specific discrimination assay. We conclude that substantial genetic variability exists among wild species. Additionally, significant but lesser variability at the molecular level occurs among accessions of the cultivated species. This survey is the first to report significant SNP level diversity among transcripts, and may explain some of the phenotypic differences observed in germplasm surveys. Understanding SNP variants in the Arachis accessions will benefit in developing markers for selection.

  17. The genus Hymenocrater: a comprehensive review.

    Science.gov (United States)

    Morteza-Semnani, Katayoun; Ahadi, Hamideh; Hashemi, Zahra

    2016-12-01

    The genus Hymenocrater Fisch. et Mey. (Lamiaceae) contains over 21 species in the world. Some species have been used in folk medicine around the world. The present review comprises the ethnopharmacological, phytochemical and therapeutic potential of various species of Hymenocrater. This review brings together most of the available scientific research regarding the genus Hymenocrater. Through this review, the authors hope to attract the attention of natural product researchers throughout the world to focus on the unexplored potential of Hymenocrater species. This review has been compiled using references from major databases such as Chemical Abstracts, Medicinal and Aromatic Plants Abstracts, ScienceDirect, SciFinder, Google Scholar, Scopus, PubMed, Springer Link and books, without limiting the dates of publication. General web searches were also carried out using Google and Yahoo search engines by applying some related search terms (e.g., Hymenocrater spp., phytochemical, pharmacological, extract, essential oil and traditional uses). The articles related to agriculture, ecology, and synthetic works and those using languages other than English or Persian have been excluded. The genus Hymenocrater contains essential oil. Flavonoids, phenolic acids and terpenoids are important constituents of this genus. The pharmacological studies confirmed that the species of the genus Hymenocrater showed antimicrobial, antiparasitic, antioxidant, anticancer and antidiabetic activities. This review discusses the current knowledge of Hymenocrater species that review therapeutic potential, especially their effects on the cancer cells and gaps offering opportunities for future research.

  18. Nutrient composition of five varieties of commonly consumed Nigerian groundnut (Arachis hypogaea L.

    Directory of Open Access Journals (Sweden)

    Tayo, G. O.

    2012-03-01

    Full Text Available The nutrient composition of the five major varieties of groundnut (Arachis hypogaea L. commonly consumed in the south-western part of Nigeria was investigated. Raw dryshelled samples were analyzed for proximate (moisture, ash, protein, fat, fiber and carbohydrate, ‘vitamins’ (β-carotene, thiamine, niacin and tocopherol and minerals (Na, K, Ca, P, Mg, Fe, Mn, Zn, Cu, Se, Co, Al, As, Cd and Pb. Results showed that the groundnuts had 4.12-9.26% moisture, 2.77-3.31% ash, 24.26-26.35% protein, 45.41-48.14% fat, 2.51-2.94% fiber and 15.90-17.75% carbohydrate. All the varieties analyzed showed β-carotene (63.32-65.35mg/100g, thiamin (0.73-0.98mg/100g, niacin (14.00-16.03mg/100g and tocopherol (18.62-21.07mg/100g activities; with boro red having significantly (P P> Mg> Ca> Mn> Cu> Na> Zn> Fe> Al> Se in most of the varieties. Boro red also had the highest elemental contents in most of the minerals analyzed. Thus, these groundnuts can be considered useful foodstuffs in minimizing proteinenergy malnutrition (PEM and micronutrient deficiencies in Nigeria. However, the boro red variety is most recommended. The outcome of this research is a contribution to the food composition table.Se ha investigado la composición en nutrientes de las cinco principales variedades de maní (Arachis hypogaea L. de consumo habitual en la parte sur-occidental de Nigeria. A las muestras crudas con cáscara y secas se les analizó su composición proximal (humedad, ceniza, proteína, grasa, fibra e hidratos de carbono, vitaminas (β-caroteno, tiamina, niacina y tocoferol y minerales (Na, K, Ca, P, Mg, Fe, Mn, Zn, Cu, Se, Co, Al, As, Cd y Pb. Los resultados mostraron que el maní tenía entre 4.12 - 9.26% de humedad, 2.77- 3.31% de cenizas, 24.26 - 26.35% de proteína, 45.41 - 48.14% de materia grasa, 2.51 - 2.94% de fibra y 15.90 -17.75% de carbohidratos. Todas las variedades analizadas contenían β-caroteno (63.32-65.35mg/100g, tiamina (0.73-0.98mg/100g, niacina (14

  19. Diversification of primary gene pool through introgression of resistance to foliar diseases from synthetic amphidiploids to cultivated groundnut (Arachis hypogaea L.

    Directory of Open Access Journals (Sweden)

    Varsha Kumari

    2014-04-01

    Full Text Available Groundnut (Arachis hypogaea L. is widely grown and consumed around the world and is considered to have originated from a single hybridization event between two wild diploids. The utilization of wild germplasm in breeding programs has been restricted by reproductive barriers between wild and cultivated species and technical difficulties in making large numbers of crosses. Efforts to overcome these hurdles have resulted in the development of synthetic amphidiploids, namely ISATGR 278-18 (Arachis duranesis × Arachis batizocoi and ISATGR 5B (Arachis magna × A. batizocoi, which possess several desirable traits, including resistance to foliar diseases that generally cause huge yield losses annually in groundnut growing areas of Asia, America, and Africa. With an objective to improve foliar disease resistance, the primary gene pool was diversified by introgressing foliar disease resistance in five cultivated genotypes (ICGV 91114, ICGS 76, ICGV 91278, JL 24, and DH 86 from synthetic amphidiploids using a backcross breeding approach. Several introgression lines with resistance to two foliar diseases (rust and late leaf spot were identified with levels of resistance equal to the donors. These backcross derived lines have shown a wide range of variation for several morphological and agronomic traits. These lines, after further evaluation and selection, can serve as donors in future breeding programs aimed at developing improved cultivars with desirable agronomic traits, high resilience to biotic/abiotic stresses and a broadened genetic base.

  20. Diversification of primary gene pool through introgression of resistance to foliar diseases from synthetic amphidiploids to cultivated groundnut(Arachis hypogaea L.)

    Institute of Scientific and Technical Information of China (English)

    Varsha; Kumari; M.V.C.Gowda; Vinod; Tasiwal; Manish; K.Pandey; Ramesh; S.Bhat; Nalini; Mallikarjuna; Hari; D.Upadhyaya; Rajeev; K.Varshney

    2014-01-01

    Groundnut(Arachis hypogaea L.)is widely grown and consumed around the world and is considered to have originated from a single hybridization event between two wild diploids.The utilization of wild germplasm in breeding programs has been restricted by reproductive barriers between wild and cultivated species and technical difficulties in making large numbers of crosses.Efforts to overcome these hurdles have resulted in the development of synthetic amphidiploids,namely ISATGR 278-18(Arachis duranesis×Arachis batizocoi)and ISATGR 5B(Arachis magna×A.batizocoi),which possess several desirable traits,including resistance to foliar diseases that generally cause huge yield losses annually in groundnut growing areas of Asia,America,and Africa.With an objective to improve foliar disease resistance,the primary gene pool was diversified by introgressing foliar disease resistance in five cultivated genotypes(ICGV 91114,ICGS 76,ICGV 91278,JL 24,and DH 86)from synthetic amphidiploids using a backcross breeding approach.Several introgression lines with resistance to two foliar diseases(rust and late leaf spot)were identified with levels of resistance equal to the donors.These backcross derived lines have shown a wide range of variation for several morphological and agronomic traits.These lines,after further evaluation and selection,can serve as donors in future breeding programs aimed atdeveloping improved cultivars with desirable agronomic traits,high resilience to biotic/abiotic stresses and a broadened genetic base.

  1. Factors enhancing Agrobacterium tumefaciens-mediated gene transfer in peanut (Arachis hypogaea L.)

    Science.gov (United States)

    Egnin, M.; Mora, A.; Prakash, C. S.; Mortley, D. G. (Principal Investigator)

    1998-01-01

    Parameters enhancing Agrobacterium-mediated transfer of foreign genes to peanut (Arachis hypogaea L.) cells were investigated. An intron-containing beta-glucuronidase uidA (gusA) gene under the transcriptional control of CaMV 35S promoter served as a reporter. Transformation frequency was evaluated by scoring the number of sectors expressing GUS activity on leaf and epicotyl explants. The 'Valencia Select' market type cv. New Mexico was more amenable to Agrobacterium transformation than the 'runner' market type cultivars tested (Florunner, Georgia Runner, Sunrunner, or South Runner). The disarmed Agrobacterium tumefaciens strain EHA101 was superior in facilitating the transfer of uidA gene to peanut cells compared to the disarmed strain C58. Rinsing of explants in half-strength Murashige-Skoog (MS) media prior to infection by Agrobacterium significantly increased the transformation efficiency. The use of cocultivation media containing high auxin [1.0 or 2.5 mg/l (4.53 micromolar or 11.31 micromolar) 2,4-D] and low cytokinin [0.25 or 0.5 mg/l (1.0 micromolar or 2.0 micromolar) BA] promoted higher transformation than either hormone-free or thidiazuron-containing medium. The polarity of the epicotyl during cocultivation was important; explants incubated in an inverted (vertically) manner followed by a vertically upright position resulted in improved transformation and shoot regeneration frequencies. Preculture of explants in MS basal medium or with 2.5 mg thidiazuron per l prior to infection drastically decreased the number of transformed zones. The optimized protocol was used to obtain transient transformation frequencies ranging from 12% to 36% for leaf explants, 15% to 42% for epicotyls. Initial evidence of transformation was obtained by polymerase chain reaction and subsequently confirmed by Southern analysis of regenerated plants.

  2. Groundnut (Arachis Hypogaea L. Cultivation in Türkiye and Osmaniye Peanut as a Geographical Indication

    Directory of Open Access Journals (Sweden)

    Güven Şahin

    2014-12-01

    Full Text Available Groundnut (Arachis hypogaea L. whose fatherland is South America outshines with its several aspects at agricultural field. First of all, even though the almost all of the harvest is consumed as food, since the seeds of this plant includes pretty much amount of oil, they constitute a highyl important raw material. The reason why demand of people for groundnut has been increasing as years go by, is the great quality degree of the oil handled and its benefits for human health. Another significant feature of this plant is that, as a member of bean family it has the ability of providing nitrogene fixation. From this point of view, groundnut is considered as the most essential plant of crop rotation technique. Most of the groundnut -also known as “araşit” in Türkiye- growth is done in Mediterranean Region, especially the zone of Adana. In our country, almost all of the harvest handled is consumed as sustenance in addition to that, remarkable increases are observed in the production of the plant mentioned above; furthermore by the year 2011, Türkiye has become the most important producer at his territory. In Türkiye, Osmaniye is now the center of groundnut generation and therefore the city is identical with its product. This could widely be understood from that the plant is secured by geographical indication patent in the name of “Groundnut of Osmaniye”. In that research, the main scope is agricultural geography and the highlighted topics are botanical properties, planting and the disrribution and commerce of the recommendations about the requirements follow. Moreover, the groundnut of Osmaniye, in terms of geographical indication is reconized to the reader

  3. Factors enhancing Agrobacterium tumefaciens-mediated gene transfer in peanut (Arachis hypogaea L.)

    Science.gov (United States)

    Egnin, M.; Mora, A.; Prakash, C. S.; Mortley, D. G. (Principal Investigator)

    1998-01-01

    Parameters enhancing Agrobacterium-mediated transfer of foreign genes to peanut (Arachis hypogaea L.) cells were investigated. An intron-containing beta-glucuronidase uidA (gusA) gene under the transcriptional control of CaMV 35S promoter served as a reporter. Transformation frequency was evaluated by scoring the number of sectors expressing GUS activity on leaf and epicotyl explants. The 'Valencia Select' market type cv. New Mexico was more amenable to Agrobacterium transformation than the 'runner' market type cultivars tested (Florunner, Georgia Runner, Sunrunner, or South Runner). The disarmed Agrobacterium tumefaciens strain EHA101 was superior in facilitating the transfer of uidA gene to peanut cells compared to the disarmed strain C58. Rinsing of explants in half-strength Murashige-Skoog (MS) media prior to infection by Agrobacterium significantly increased the transformation efficiency. The use of cocultivation media containing high auxin [1.0 or 2.5 mg/l (4.53 micromolar or 11.31 micromolar) 2,4-D] and low cytokinin [0.25 or 0.5 mg/l (1.0 micromolar or 2.0 micromolar) BA] promoted higher transformation than either hormone-free or thidiazuron-containing medium. The polarity of the epicotyl during cocultivation was important; explants incubated in an inverted (vertically) manner followed by a vertically upright position resulted in improved transformation and shoot regeneration frequencies. Preculture of explants in MS basal medium or with 2.5 mg thidiazuron per l prior to infection drastically decreased the number of transformed zones. The optimized protocol was used to obtain transient transformation frequencies ranging from 12% to 36% for leaf explants, 15% to 42% for epicotyls. Initial evidence of transformation was obtained by polymerase chain reaction and subsequently confirmed by Southern analysis of regenerated plants.

  4. Identification of Expressed Resistance Gene Analogs from Peanut (Arachis hypogaea L.) Expressed Sequence Tags

    Institute of Scientific and Technical Information of China (English)

    Zhanji Liu; Suping Feng; Manish K.Pandey; Xiaoping Chen; Albert K.Culbreath; Rajeev K.Varshney; Baozhu Guo

    2013-01-01

    Low genetic diversity makes peanut (Arachis hypogaea L.) very vulnerable to plant pathogens,causing severe yield loss and reduced seed quality.Several hundred partial genomic DNA sequences as nucleotide-binding-site leucine-rich repeat (NBS-LRR) resistance genes (R) have been identified,but a small portion with expressed transcripts has been found.We aimed to identify resistance gene analogs (RGAs) from peanut expressed sequence tags (ESTs) and to develop polymorphic markers.The protein sequences of 54 known R genes were used to identify homologs from peanut ESTs from public databases.A total of 1,053 ESTs corresponding to six different classes of known R genes were recovered,and assembled 156 contigs and 229 singletons as peanut-expressed RGAs.There were 69 that encoded for NBS-LRR proteins,191 that encoded for protein kinases,82 that encoded for LRR-PK/transmembrane proteins,28 that encoded for Toxin reductases,11 that encoded for LRR-domain containing proteins and four that encoded for TM-domain containing proteins.Twenty-eight simple sequence repeats (SSRs)were identified from 25 peanut expressed RGAs.One SSR polymorphic marker (RGA121) was identified.Two polymerase chain reaction-based markers (Ahsw-1 and Ahsw-2) developed from RGA013 were homologous to the Tomato Spotted Wilt Virus (TSWV) resistance gene.All three markers were mapped on the same linkage group AhlV.These expressed RGAs are the source for RGA-tagged marker development and identification of peanut resistance genes.

  5. Revision of monotypic genus Llavea (Cryptogrammoideae: Pteridaceae

    Directory of Open Access Journals (Sweden)

    Mónica Palacios-Rios

    2016-12-01

    Full Text Available Llavea Lag. is a genus of Cryptogrammoideae (Pteridaceae, whose only species is distributed from southern United States and Mexico to Guatemala and Costa Rica, although it lives mainly in Mesoamerica, inhabiting preferably calcicolous habitats associated with forests and mountains. The genus is easily recognized by the presence of fertile leaves hemi-dimorphic, with the fertile apical portion with longer and narrower segments than the sterile ones, with strongly revolute margin, and rhizome scales bicolorous, shiny, and black. This paper presents a revision of the genus, nomenclatural issues are resolved, and and palynological morphological diversity are reviewed, as well as its distribution, phenology, ecology, and applications, based on field and herbarium specimens studies. In addition, two names related to Llavea, Allosorus karwinskii Kunze and Ceratodactylis osmundioides J. Sm., were lectotypified.

  6. The genus curve of the Abell clusters

    Science.gov (United States)

    Rhoads, James E.; Gott, J. Richard, III; Postman, Marc

    1994-01-01

    We study the topology of large-scale structure through a genus curve measurement of the recent Abell catalog redshift survey of Postman, Huchra, and Geller (1992). The structure is found to be spongelike near median density and to exhibit isolated superclusters and voids at high and low densities, respectively. The genus curve shows a slight shift toward 'meatball' topology, but remains consistent with the hypothesis of Gaussian random phase initial conditions. The amplitude of the genus curve corresponds to a power-law spectrum with index n = 0.21(sub -0.47 sup +0.43) on scales of 48/h Mpc or to a cold dark matter power spectrum with omega h = 0.36(sub -0.17 sup +0.46).

  7. Representationen av genus : En semiotisk studie av Tom Fords Gucci kampanj 2003 samt Frida Gianninis Gucci kampanj 2013

    OpenAIRE

    Andréasson, Sara

    2013-01-01

    Title: The representation of gender: A semiotic study of Tom Ford's Gucci campaign 2003 and Frida Gianninis Gucci Campaign 2013. Number of pages: 73 (79 including enclosures) Author: Sara Andréasson Tutor: Anne-Marie Morhed Course: Media and Communication Studies D (2IV091) Period: VT 2013 University: Division of Media and Communication, Department of Informatics and Media, Uppsala University. Purpose/ Aim: The aim of this study was to examine the representation of gender in advertising that ...

  8. Morphological study of the genus Herposiphonia (Rhodophyta, Rhodomelaceae) on the coast of eastern Guangdong, China, with a description of H. pinnata sp. nov.

    Science.gov (United States)

    Ding, Lanping; Tan, Huaqiang; Zhang, Quanliang; Zeng, Lingzhao; Huang, Bingxin

    2016-03-01

    We present a taxonomic study of taxa of the red algae genus Herposiphonia (Rhodophyta, Rhodomelaceae), collected from the coast of eastern Guangdong, China. We made detailed morphological studies and considered recent taxonomic criteria for species delimitation, and are making the first report of five different species on the coast of Guangdong, including a new species. The species identified were H. caespitosa Tseng, H. hollenbergii Dawson, H. pecten - veneris (Harvey) Falkenberg, H. subdisticha Okamura and H. pinnata Ding and Tan sp. nov. H. pinnata sp. nov. is characterized by bright green thalli; most parts of the feathery thalli are free of the substratum; determinate branches and indeterminate branches are arranged in a chaotic sequence; the primary axis has bare segments; the determinate branch has 9-11 periaxial cells per segment; vegetative trichoblasts are abundant; and tetrasporangia are formed on the middle of the determinate branch with 1-8 successive segments in a single rectilinear series. This paper is also the first record of sporophyte plants of H. pecten-veneris.

  9. A systematic study of Peliococcus Borchsenius (Hemiptera: Coccoidea: Pseudococcidae), with descriptions of a new Palaearctic genus and four new species from Turkey.

    Science.gov (United States)

    Kaydan, Mehmet Bora

    2015-02-20

    Within the Phenacoccinae (Hemiptera: Coccoidea: Pseudococcidae), there are four nominal genera that include species with clusters or groups of multilocular disc pores and/or oral collar tubular ducts of more than one size, namely Peliococcus Borchsenius (= Spinococcus Borchsenius and Eupeliococcus Săvescu), Peliococcopsis Borchsenius, Erimococcus Ezzat, and Seyneria Goux. This study analysed molecular data (from the mitochondrial gene cytochrome oxidase I, COI, and a fragment of the D2 and D3 regions of the large subunit ribosomal DNA gene, 28S) from Palaearctic species of Peliococcus, Peliococcopsis and a new genus, Pelionella Kaydan to demonstrate: (i) that Peliococcus and several morphologically similar genera do not form a monophyletic group; (ii) Peliococcus, as currently understood, is not monophyletic, and (iii) the structure of the multilocular disc pores is important for recognising the systematic position of these genera. The morphological data were fitted to the molecular tree to allow reassessment of the generic classification and to produce morphological diagnoses of the genera. Five species have been moved to the genus Erimococcus Ezzat: Peliococcus kimmericus Kiritchenko, P. montanus Bazarov & Babaeva, P. multitubulatus (Danzig), P. salviae Hadzibejli and P. talhouki Matille-Ferrero, as E. kimmericus (Kiritchenko) comb. nov., E. montanus (Bazarov & Babaeva) comb. nov., E. multitubulatus (Danzig) comb. nov., E. salviae (Hadzibejli) comb.nov. and E. talhouki (Matille-Ferrero) comb. nov. In addition, a new species of Erimococcus is described, namely Erimococcus ozani Kaydan sp. nov. Also Peliococcus ilamicus Moghaddam syn. nov. is recognised as a junior synonym of Phenacoccus kimmericus Kiritchenko (previously in Peliococcus, now in Erimococcus). A new genus, Pelionella gen. nov. is introduced to take nine species, namely Peliococcus balteatus Green, P. cycliger Leonardi, P. manifectus Borchsenius, P. stellarocheae Goux, P. glandulifer Borchsenius, P

  10. Exponentially many maximum genus embeddings and genus embeddings for complete graphs

    Institute of Scientific and Technical Information of China (English)

    2008-01-01

    There are many results on the maximum genus, among which most are written for the existence of values of such embeddings, and few attention has been paid to the estimation of such embeddings and their applications. In this paper we study the number of maximum genus embeddings for a graph and find an exponential lower bound for such numbers. Our results show that in gen-eral case, a simple connected graph has exponentially many distinct maximum genus embeddings. In particular, a connected cubic graph G of order n always has at least 2~1/2m+n+ α2 distinct maximum genus embeddings, where α and m denote, respectively, the number of inner vertices and odd compo-nents of an optimal tree T . What surprise us most is that such two extremal embeddings (i.e., the maximum genus embeddings and the genus embeddings) are sometimes closely related with each other. In fact, as applications, we show that for a suffcient large natural number n, there are at least C2 n4 dmeapneyn dgienngu os ne mthbee vdadliuneg soffonrocf ormespidleutee 1g2r.a pThh eKsen rwesiuthlt sn i m≡p r4o,v 7e, 1th0e ( mbooudn1d2)s, owbthaeirnee dC b iys Ka ocroznhsikta anncde Voss and the methods used here are much simpler and straight.

  11. Assessment of Genetic Stability Among In Vitro Plants of Arachis retusa Using RAPD and AFLP Markers for Germplasm Preservation

    Institute of Scientific and Technical Information of China (English)

    Rachel Fatima Gagliardi; Luiz Ricardo Hanai; Georgia Pacheco; Carlos Alberto Oliveira; Leonardo Alves Carneiro; José Francisco Montenegro Valls; Elisabeth Mansur; Maria Lucia Carneiro Vieira

    2007-01-01

    Arachis retusa Krapov. et W. C. Gregory et Valls is endemic in the West-central region of Brazil, occurring in areas endangered by human actions. The establishment of in vitro preservation methods for wild species of Arachis isan alternative to seed banks for germplasm storage, multiplication and distribution. The risk of genetic changesinduced by tissue culture and the monitoring of the genetic stability of the biological material before, during andafter storage must be considered in the context of conservation. Random amplified polymorphic DNA (RAPD) andamplified fragment length polymorphism (AFLP) fingerprinting were used to evaluate the genetic stability of invitro plants originated from cotyledons and embryo axes of A. retusa. Cotyledons originated shoots through directorganogenesis and embryo axes displayed multishoot formation induced by 110 mmol/L and 8.8 mmol/L BAP,respectively. Ninety genomlc regions (loci) generated from RAPD and 372 from AFLP analyses were evaluated. Allamplified fragments detected by both techniques in plants derived from the two explant types were monomorphic.The results indicate that the recovered shoots are genetically stable at the assessed genomic regions.

  12. Ultrastructural characters of the spermatozoa in Digeneans of the genus Lecithochirium Lühe, 1901 (Digenea, Hemiuridae, parasites of fishes: comparative study of L. microstomum and L. musculus

    Directory of Open Access Journals (Sweden)

    Ndiaye Papa Ibnou

    2014-01-01

    Full Text Available This study provides the first ultrastructural data of spermatozoa in the genus Lecithochirium. The spermatozoa of L. microstomum (from Trichiurus lepturus in Senegal and L. musculus (from Anguilla anguilla in Corsica exhibit the general pattern described in the great majority of the Digenea, namely two axonemes with the 9 + “1” pattern typical of the Trepaxonemata, one mitochondrion, a nucleus, parallel cortical microtubules and external ornamentation of the plasma membrane. Spermatozoa of L. microstomum and L. musculus have some specific features such as the presence of a reduced number of cortical microtubules arranged on only one side of the spermatozoon, the lack of spine-like bodies and expansion of the plasma membrane. The external ornamentation of the plasma membrane entirely covers the anterior extremity of the spermatozoa. The ultrastructure of the posterior extremity of the spermatozoa corresponds to the pattern previously described in the Hemiuridae, characterized by only singlets of the second axoneme. A particularity of these spermatozoa is the organization of the microtubule doublets of the second axoneme around the nucleus in the posterior part of the spermatozoon.

  13. Genus Profundiconus Kuroda, 1956 (Gastropoda, Conoidea: Morphological and molecular studies, with the description of five new species from the Solomon Islands and New Caledonia

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    Manuel J. Tenorio

    2016-01-01

    Full Text Available The genus Profundiconus Kuroda, 1956 is reviewed. The morphological characters of the shell, radular tooth and internal anatomy of species in Profundiconus are discussed. In particular, we studied Profundiconus material collected by dredging in deep water during different scientific campaigns carried out in the Solomon Islands, Madagascar, Papua New Guinea and New Caledonia. We reconstructed a phylogeny of 55 individuals based on partial mitochondrial cox1 gene sequences. The phylogeny shows several clades containing individuals that do not match any of the known species of Profundiconus based on their shell and radular morphologies, and are introduced here as five new species: Profundiconus maribelae sp. nov. from the Solomon Islands; P. virginiae sp. nov. from Chesterfield Plateau (New Caledonia; P. barazeri sp. nov. from Chesterfield Plateau and the Grand Passage area (New Caledonia; P. puillandrei sp. nov. from Norfolk Ridge (New Caledonia, Kermadec Ridge (New Zealand and possibly Balut Island (Philippines; and P. neocaledonicus sp. nov. from New Caledonia. Furthermore, Profundiconus teramachii forma neotorquatus (da Motta, 1984 is raised to specific status as P. neotorquatus (da Motta, 1984.

  14. Metatranscriptomic Study of Common and Host-Specific Patterns of Gene Expression between Pines and Their Symbiotic Ectomycorrhizal Fungi in the Genus Suillus.

    Directory of Open Access Journals (Sweden)

    Hui-Ling Liao

    2016-10-01

    Full Text Available Ectomycorrhizal fungi (EMF represent one of the major guilds of symbiotic fungi associated with roots of forest trees, where they function to improve plant nutrition and fitness in exchange for plant carbon. Many groups of EMF exhibit preference or specificity for different plant host genera; a good example is the genus Suillus, which grows in association with the conifer family Pinaceae. We investigated genetics of EMF host-specificity by cross-inoculating basidiospores of five species of Suillus onto ten species of Pinus, and screened them for their ability to form ectomycorrhizae. Several Suillus spp. including S. granulatus, S. spraguei, and S. americanus readily formed ectomycorrhizae (compatible reaction with white pine hosts (subgenus Strobus, but were incompatible with other pine hosts (subgenus Pinus. Metatranscriptomic analysis of inoculated roots reveals that plant and fungus each express unique gene sets during incompatible vs. compatible pairings. The Suillus-Pinus metatranscriptomes utilize highly conserved gene regulatory pathways, including fungal G-protein signaling, secretory pathways, leucine-rich repeat and pathogen resistance proteins that are similar to those associated with host-pathogen interactions in other plant-fungal systems. Metatranscriptomic study of the combined Suillus-Pinus transcriptome has provided new insight into mechanisms of adaptation and coevolution of forest trees with their microbial community, and revealed that genetic regulation of ectomycorrhizal symbiosis utilizes universal gene regulatory pathways used by other types of fungal-plant interactions including pathogenic fungal-host interactions.

  15. Lung parasites of the genus Metastrongylus Molin, 1861 (Nematoda: Metastrongilidae) in wild boar (Sus scrofa L., 1758) in Central-Italy: An eco-epidemiological study.

    Science.gov (United States)

    Poglayen, Giovanni; Marchesi, Barbara; Dall'Oglio, Giulia; Barlozzari, Giulia; Galuppi, Roberta; Morandi, Benedetto

    2016-02-15

    The respiratory tracts of 57 wild boars (Sus scrofa L. 1758) hunted in central Italy during the 2011/2012 hunting season were examined to detect the presence of lung worms. Fifty-five out of 57 animals (96,5%) were positive. Five species of Metastrongylus were detected and their prevalence was as follows: Metastrongylus asymmetricus Noda, 1973 (91.2%), Metastrongylus confusus Jansen, 1964 and Metastrongylus salmi Gedoelst, 1923 (87.7%), Metastrongylus apri Gmelin, 1790 (80.7%), Metastrongylus pudendotectus Vostokov, 1905 (70.2%). In most cases multi-species infection was observed. The highest parasite load was found in young animals (<1 year old). The Metastrongylus genus sex ratio (M/F) had a range from 1:4.8 to 1:1.5 in favor of females. The Simpson and Shannon-Wiener indices showed a moderate uniformity in parasite community composition. The Fager index highlighted a high degree of affinity among all pairs of selected parasites. The whole parasite population showed an aggregate distribution. Our findings confirm that these parasites are widespread in the wild boar population. The establishment of outdoor domestic pig farming in the same area of the game preserve could pose the risk of infection to domestic animals. Further studies will be needed to understand the factors involved in the presence and prevalence of the intermediate host as well as the population dynamics of Metastrongylus spp.

  16. Phylogeny of the Peckia-genus group

    DEFF Research Database (Denmark)

    Buenaventura Ruiz, Ingrid Eliana; Pape, Thomas

    2015-01-01

    Peckia is the most species-rich necrophagous genus among the Neotropical sarcophagids, encompassing 67 species distributed in 5 subgenera. Recent phylogenetic studies have challenged the monophyly of this genus with regard to species of the genera Peckiamyia, Titanogrypa, and Villegasia, and the ...

  17. The phyletic status of the genus Planaria (Platyhelminthes, Turbellaria, Tricladida)

    NARCIS (Netherlands)

    Ball, Ian R.; Gourbault, Nicole

    1978-01-01

    The amphiatlantic distribution of the genus Planaria is incompatible with our current hypothesis of the historical biogeography of freshwater planarians. New anatomical studies suggest the possibility that the genus is not strictly monophyletic; new karyological data are strongly corroborative of th

  18. Biodiversity of the genus Cladophialophora

    NARCIS (Netherlands)

    Badali, H.; Gueidan, C.; Najafzadeh, M.J.; Bonifaz, A.; Gerrits van den Ende, A.H.G.; de Hoog, G.S.

    2008-01-01

    Cladophialophora is a genus of black yeast-like fungi comprising a number of clinically highly significant species in addition to environmental taxa. The genus has previously been characterized by branched chains of ellipsoidal to fusiform conidia. However, this character was shown to have evolved s

  19. Biodiversity of the genus Cladophialophora

    NARCIS (Netherlands)

    Badali, H.; Gueidan, C.; Najafzadeh, M.J.; Bonifaz, A.; Gerrits van den Ende, A.H.G.; de Hoog, G.S.

    2008-01-01

    Cladophialophora is a genus of black yeast-like fungi comprising a number of clinically highly significant species in addition to environmental taxa. The genus has previously been characterized by branched chains of ellipsoidal to fusiform conidia. However, this character was shown to have evolved s

  20. Genus Distributions of Moebius Ladders

    Institute of Scientific and Technical Information of China (English)

    李德明

    2005-01-01

    The genus distribution of a graph is a polynomial whose coefficients are the partition of the number of embeddings with respect to the genera. In this paper,the genus distribution of Moebius ladders is provided which is an infinite class of 3-connected simple graphs.

  1. Comparative studies of the venom of a new Taipan species, Oxyuranus temporalis, with other members of its genus.

    Science.gov (United States)

    Barber, Carmel M; Madaras, Frank; Turnbull, Richard K; Morley, Terry; Dunstan, Nathan; Allen, Luke; Kuchel, Tim; Mirtschin, Peter; Hodgson, Wayne C

    2014-07-02

    Taipans are highly venomous Australo-Papuan elapids. A new species of taipan, the Western Desert Taipan (Oxyuranus temporalis), has been discovered with two specimens housed in captivity at the Adelaide Zoo. This study is the first investigation of O. temporalis venom and seeks to characterise and compare the neurotoxicity, lethality and biochemical properties of O. temporalis venom with other taipan venoms. Analysis of O. temporalis venom using size-exclusion and reverse-phase HPLC indicated a markedly simplified "profile" compared to other taipan venoms. SDS-PAGE and agarose gel electrophoresis analysis also indicated a relatively simple composition. Murine LD50 studies showed that O. temporalis venom is less lethal than O. microlepidotus venom. Venoms were tested in vitro, using the chick biventer cervicis nerve-muscle preparation. Based on t90 values, O. temporalis venom is highly neurotoxic abolishing indirect twitches far more rapidly than other taipan venoms. O. temporalis venom also abolished responses to exogenous acetylcholine and carbachol, indicating the presence of postsynaptic neurotoxins. Prior administration of CSL Taipan antivenom (CSL Limited) neutralised the inhibitory effects of all taipan venoms. The results of this study suggest that the venom of the O. temporalis is highly neurotoxic in vitro and may contain procoagulant toxins, making this snake potentially dangerous to humans.

  2. Espécies selvagens do gênero arachis: observações sôbre os exemplares da coleção da seção de citologia Wild species of Arachis: observations on some plants in the cytology department collection

    Directory of Open Access Journals (Sweden)

    Cândida H. T. M. Conagin

    1962-01-01

    Full Text Available Uma coleção viva de espécies selvagens de amendoim (Arachis spp. vem sendo há alguns anos mantida pela Seção de Citologia para realizar pesquisas com êsse gênero e colaborar com a Seção de Oleaginosas no melhoramento das variedades econômicas. Neste trabalho é apresentada a descrição de dez espécies cuja classificação botânica é conhecida. Algumas como Arachis villcsulicarpa, A. diogoi e A. monticola são de porte ereto. Arachis repens, A. glabrata, A. hagenbeckii e A. villosa são rasteiros; é também rasteiro uma espécie ainda não identificado, de número V. 360. A presente descrição é apenas um subsidio para melhor conhecimento das espécies. Do mesmo modo que foi feito poro as variedades do amendoim cultivado, Arachis hypogaea L. (3, também para as espécies selvagens foram estudados as principais características dos exemplares da coleção, procurando delimitar cada grupo de plantas, considerando as condições locais de Campinas.Since some years ago the Cytology Departament maintains a plant collection of wild species of Arachis with which many basic researches have been conducted. This paper presents the description of ten species which are already botanically classified. Some are erect as Arachis villosalicarpa, A. diogoi and A. monticola; others are of the runner type as Arachis repens, A. glabrata, A. hagenbekii and A. villosa. A not yet identified species, called V. 360, is of the runner type too. The present description contributes to a better knowledge of the species in the some way as it has been done before for the commercial varieties of Arachis hypogaea L. The principal characteristics of the wild plants and the measurements of their parts hove been listed here, looking for a delimitation of each group of plants far the local conditions of Campinas.

  3. A study of ovule-to-seed development in Ceratiosicyos (Achariaceae and the systematic position of the genus

    Directory of Open Access Journals (Sweden)

    E. M. A. Steyn

    2002-12-01

    Full Text Available A light microscope study of developing ovules and seeds of Ceratiosicyos laevis (Thunb. A.Meeuse was undertaken to aug­ment an investigation of ovule and seed structure in Achariaceae. a tri-generic family comprising three species of herbaceous perennials endemic to southern Africa. Tests for myrmecochory suggest that seed of Ceratiosicyos Nees is not dispersed by ants like those of Acharia Thunb. and Guthriea Bolus. Structural differences include the absence of a raphal ridge and imbibition lidand the presence of long funicles and medium-sized embryos in Ceratiosicyos.

  4. A study of ovule-to-seed development in Ceratiosicyos (Achariaceae and the systematic position of the genus

    Directory of Open Access Journals (Sweden)

    E. M. A. Steyn

    2002-12-01

    Full Text Available A light microscope study of developing ovules and seeds of Ceratiosicyos laevis (Thunb. A.Meeuse was undertaken to aug­ment an investigation of ovule and seed structure in Achariaceae. a tri-generic family comprising three species of herbaceous perennials endemic to southern Africa. Tests for myrmecochory suggest that seed of Ceratiosicyos Nees is not dispersed by ants like those of Acharia Thunb. and Guthriea Bolus. Structural differences include the absence of a raphal ridge and imbibition lidand the presence of long funicles and medium-sized embryos in Ceratiosicyos.

  5. Next generation sequence analysis of the forage peanut (Arachis pintoi virome

    Directory of Open Access Journals (Sweden)

    Pablo Andrés Gutiérrez Sánchez

    2016-07-01

    resulted in the complete genome assembly of Peanut mottle virus (9707 nt, Turnip yellows virus (5578 nt and two variants of a virus with phylogenetic affinity to the genus Allexivirus. These two variants lack ORF6 present in Allexivirus and probably belong to an uncharacterized genus within the family Alphaflexiviridae. The presence of at least three viruses infecting A. pintoi in Colombia highlights the importance of starting a germplasm clean-up program of the plant material used as seed in this crop.

  6. [Diversity of Plants Belonging to the Genus Ligularia (Asteraceae) Based on Terpenoids and Synthetic Studies on Some Terpenoids].

    Science.gov (United States)

    Tori, Motoo

    2016-01-01

    The terpenoid constituents of Ligularia virgaurea (30 samples), Ligularia pleurocaulis (8 samples), Ligularia dictyoneura (8 samples), Ligularia brassicoides (5 samples), Ligularia lingiana (1 sample), and Ligularia liatroides (1 sample)(all belonging to section Senecillis of Ligularia, Asteraceae and collected in Yunnan, Sichuan, Qinghai, and Gansu provinces, China), from which 220 compounds were isolated, including 113 novel ones, are reviewed. Five chemotypes were identified in L. virgaurea based on their chemical constituents, while three clades were detected from the base sequences. Although intra-specific diversity was found in L. virgaurea, more samples were needed of other species in order to reach a definite conclusion. Inter-specific diversity was also examined in section Senecillis but was restricted due to the scarcity of samples. Synthetic studies on chiral natural products to determine their absolute configurations, especially those of riccardiphenols A and B as well as crispatanolide, which were all isolated from the liverwort, are briefly reviewed.

  7. Study on Gynacantha Genus ( Odonata: Aeshnidae) from China%中国长尾蜓属(蜻蜓目:蜓科)研究

    Institute of Scientific and Technical Information of China (English)

    张宏杰; 李星星

    2011-01-01

    There are nine species of Gynacantha genus known so far in China, and G. japonica Bartenef, 1909 and G. saltatrix Martin, 1909 are new recorded species in Shaanxi Province. The distribution and species key of Gynacantha genus from China are reported.%迄今为止,中国已知长尾蜓共9种,其中Gynacantha japonica Bartenef,1909和G.saltatrix Martin,1909为陕西省新纪录.报道了长尾蜓成虫检索表及种类分布.

  8. Neocampanella, a new corticioid fungal genus, and a note on Dendrothele bispora

    Science.gov (United States)

    Karen K. Nakasone; David S. Hibbett; Greta Goranova

    2009-01-01

    The new genus Neocampanella (Agaricales, Agaricomycetes, Basidiomycota) is established for Dentocorticium btastanos Boidin & Gilles, a crustose species, and the new combination, Neocampanella blastanos, is proposed. Morphological and molecular studies support the recognition of the new genus and its close...

  9. Pollen morphology of the genus Rubus L. I. introductory studies on the european representatives of the subgenus Rubus L.

    Directory of Open Access Journals (Sweden)

    Anna Tomlik-Wyremblewska

    2014-01-01

    Full Text Available The results of pollen morphology studies of 9 European Rubus species are presented in this paper (R. apricus, R. armeniacus, R. divaricatus, R. fabrimontanus, R. gracilis, R. hirtus, R. laciniatus, R. nessensis and R. pedemontanus. The examination is made by SEM observation for first time and also by LM. All examined pollen grains are small, isopolar and tricolporate. All grains, except for R. armeniacus and R. gracilis tend to have very long colpi. Equatorial bridges constricted, make the pores unvisible in most of the species. R. apricus, R. armeniacus, R. gracilis and R. pedemontanus have the equatorial bridges stretched therefore the dark whole was only the trace of existing endoaperture. The sculpture of the grain confirms striate pattern and the orientation of the muri indicates the differences between the species; R. pedemontanus and R. fabrimontanus appear to have long, compact muri, parallelly orientated to the colpus; R. nessensis appears muri meandrically orientated, reminiscent of "finger prints" pattern with distinct thickenings in the place of connection and numerous narrow grooves with perforations. R. hirtus appears to have striate-scabrate sculpture because of granular elements (punctae dispersed between the muri on all over the grain like the internal part of the exine. Shape and size turned out to be a poor criterion for identifying species.

  10. Quantitative testing of the methodology for genome size estimation in plants using flow cytometry: a case study of the Primulina genus

    Directory of Open Access Journals (Sweden)

    Jing eWang

    2015-05-01

    Full Text Available Flow cytometry (FCM is a commonly used method for estimating genome size in many organisms. The use of flow cytometry in plants is influenced by endogenous fluorescence inhibitors and may cause an inaccurate estimation of genome size; thus, falsifying the relationship between genome size and phenotypic traits/ecological performance. Quantitative optimization of FCM methodology minimizes such errors, yet there are few studies detailing this methodology. We selected the genus Primulina, one of the most representative and diverse genera of the Old World Gesneriaceae, to evaluate the methodology effect on determining genome size. Our results showed that buffer choice significantly affected genome size estimation in six out of the eight species examined and altered the 2C-value (DNA content by as much as 21.4%. The staining duration and propidium iodide (PI concentration slightly affected the 2C-value. Our experiments showed better histogram quality when the samples were stained for 40 minutes at a PI concentration of 100 µg ml-1. The quality of the estimates was not improved by one-day incubation in the dark at 4 °C or by centrifugation. Thus, our study determined an optimum protocol for genome size measurement in Primulina: LB01 buffer supplemented with 100 µg ml-1 PI and stained for 40 minutes. This protocol also demonstrated a high universality in other Gesneriaceae genera. We report the genome size of nine Gesneriaceae species for the first time. The results showed substantial genome size variation both within and among the species, with the 2C-value ranging between 1.62 and 2.71 pg. Our study highlights the necessity of optimizing the FCM methodology prior to obtaining reliable genome size estimates in a given taxon.

  11. Conserved genomic collinearity as a source of broadly applicable, fast evolving, markers to resolve species complexes: a case study using the lichen-forming genus Peltigera section Polydactylon.

    Science.gov (United States)

    Magain, Nicolas; Miadlikowska, Jolanta; Mueller, Olaf; Gajdeczka, Michael; Truong, Camille; Salamov, Asaf A; Dubchak, Inna; Grigoriev, Igor V; Goffinet, Bernard; Sérusiaux, Emmanuël; Lutzoni, François

    2017-08-28

    Synteny can be maintained for certain genomic regions across broad phylogenetic groups. In these homologous genomic regions, sites that are under relaxed purifying selection, such as intergenic regions, could be used broadly as markers for population genetic and phylogenetic studies on species complexes. To explore the potential of this approach, we found 125 Collinear Orthologous Regions (COR) ranging from 1 to > 10 kb across nine genomes representing the Lecanoromycetes and Eurotiomycetes (Pezizomycotina, Ascomycota). Twenty-six of these COR were found in all 24 eurotiomycete genomes surveyed for this study. Given the high abundance and availability of fungal genomes we believe this approach could be adopted for other large groups of fungi outside the Pezizomycotina. As a proof of concept, we selected three Collinear Orthologous Regions (COR1b, COR3, and COR16), based on synteny analyses of several genomes representing three classes of Ascomycota: Eurotiomycetes, Lecanoromycetes, and Lichinomycetes. COR16, for example, was found across these three classes of fungi. Here we compare the resolving power of these three new markers with five loci commonly used in phylogenetic studies of fungi, using section Polydactylon of the cyanolichen-forming genus Peltigera (Lecanoromycetes) - a clade with several challenging species complexes. Sequence data were subjected to three species discovery and two validating methods. COR markers substantially increased phylogenetic resolution and confidence, and highly contributed to species delimitation. The level of phylogenetic signal provided by each of the COR markers was higher than the commonly used fungal barcode ITS. High cryptic diversity was revealed by all methods. As redefined here, most species represent lineages that have relatively narrower, and more homogeneous biogeographical ranges than previously understood. The scabrosoid clade consists of ten species, seven of which are new. For the dolichorhizoid clade, twenty

  12. Quantitative testing of the methodology for genome size estimation in plants using flow cytometry: a case study of the Primulina genus.

    Science.gov (United States)

    Wang, Jing; Liu, Juan; Kang, Ming

    2015-01-01

    Flow cytometry (FCM) is a commonly used method for estimating genome size in many organisms. The use of FCM in plants is influenced by endogenous fluorescence inhibitors and may cause an inaccurate estimation of genome size; thus, falsifying the relationship between genome size and phenotypic traits/ecological performance. Quantitative optimization of FCM methodology minimizes such errors, yet there are few studies detailing this methodology. We selected the genus Primulina, one of the most representative and diverse genera of the Old World Gesneriaceae, to evaluate the methodology effect on determining genome size. Our results showed that buffer choice significantly affected genome size estimation in six out of the eight species examined and altered the 2C-value (DNA content) by as much as 21.4%. The staining duration and propidium iodide (PI) concentration slightly affected the 2C-value. Our experiments showed better histogram quality when the samples were stained for 40 min at a PI concentration of 100 μg ml(-1). The quality of the estimates was not improved by 1-day incubation in the dark at 4°C or by centrifugation. Thus, our study determined an optimum protocol for genome size measurement in Primulina: LB01 buffer supplemented with 100 μg ml(-1) PI and stained for 40 min. This protocol also demonstrated a high universality in other Gesneriaceae genera. We report the genome size of nine Gesneriaceae species for the first time. The results showed substantial genome size variation both within and among the species, with the 2C-value ranging between 1.62 and 2.71 pg. Our study highlights the necessity of optimizing the FCM methodology prior to obtaining reliable genome size estimates in a given taxon.

  13. Mitochondrial DNA-based genetic diversity of genus Lygus (Hemiptera: Miridae) in North America

    Science.gov (United States)

    The genus Lygus is widely distributed in North American and Eurasian continents. It is the most-studied genus in the family Miridae. However, very less information on the genetic diversity of this genus is available. Studying genetic variation among Lygus pest species and thereby constructing a ...

  14. Studies of iron-uptake mechanisms in two bacterial species of the shewanella genus adapted to middle-range (Shewanella putrefaciens) or antarctic (Shewanella gelidimarina) temperatures.

    Science.gov (United States)

    Pakchung, Amalie A H; Soe, Cho Z; Codd, Rachel

    2008-10-01

    Iron(III)-uptake mechanisms in bacteria indigenous to the Antarctic, which is the most Fe-deficient continent on Earth, have not been extensively studied. The cold-adapted, Antarctic bacterium, Shewanella gelidimarina, does not produce detectable levels of the siderophore, putrebactin, in the supernatant of Fe(III)-deprived cultures. This is distinct from the putrebactin-producing bacterium from the same genus, Shewanella putrefaciens, which is adapted to middle-range temperatures. The production of putrebactin by S. putrefaciens is optimal, when the pH value of the medium is 7.0. According to the strong positive response from whole cells in the Chrome Azurol S (CAS) agar diffusion assay, Shewanella gelidimarina appears to produce cell-associated siderophores. In the RP-HPLC trace of an Fe(III)-loaded extract from the cell-associated components of S. gelidimarina cultured in media with [Fe(III)] ca. 0 microM, a peak appears at [MeCN] ca. 77%, which decreases in intensity in a parallel experiment in which [Fe(III)] ca. 5 microM, and is barely detectable in Fe(III)-replete media ([Fe(III)] ca. 20 microM). The Fe(III)-dependence of this peak suggests that the attendant species, which is significantly more hydrophobic than putrebactin (RP-HPLC elution: [MeCN] ca. 14%), is associated with Fe(III)-management in S. gelidimarina. This study highlights the diversity in Fe(III)-uptake mechanisms in Shewanella species adapted to different environmental and thermal niches.

  15. Mountain refugia play a role in soil arthropod speciation on Madagascar: a case study of the endemic giant fire-millipede genus Aphistogoniulus.

    Science.gov (United States)

    Wesener, Thomas; Raupach, Michael J; Decker, Peter

    2011-01-01

    To elucidate the speciation mechanisms prevalent within hotspots of biodiversity, and the evolutionary processes behind the rise of their species-rich and endemic biota, we investigated the phylogeny of the giant fire-millipede genus Aphistogoniulus Silvestri, 1897, a Malagasy endemic. This study is the first comprehensive (molecular and morphological) phylogenetic study focusing on millipede (class Diplopoda) speciation on Madagascar. The morphological analysis is based on 35 morphological characters and incorporates ten described as well as two newly described species (A. rubrodorsalisn. sp. and A. jeekelin. sp.) of Aphistogoniulus. The molecular analysis is based on both mitochondrial (COI and 16S), and nuclear genes (complete 18S rDNA), together comprised of 3031 base pairs, which were successfully sequenced for 31 individual specimens and eight species of Aphistogoniulus. In addition to the null-model (speciation by distance), two diversification models, mountain refugia and ecotone shift, were discovered to play a role in the speciation of soil arthropods on Madagascar. Mountain refugia were important in the speciation of the A. cowani clade, with three species occurring in the Andringitra and Ranomafana Mountains in the southeast (A. cowani), the Ambohijanahary and Ambohitantely Mountains in the mid-west (A. sanguineus), and the Marojejy Mountain in the northeast (A. rubrodorsalisn. sp.). An ecotone shift from the eastern rainforest to the unique subarid spiny forest of Mahavelo was discovered in the A. vampyrus-A. aridus species-pair. In the monophyletic A. diabolicus clade, evidence for divergent evolution of sexual morphology was detected: species with greatly enlarged gonopods are sister-taxa to species with normal sized gonopods. Among the large-bodied Spirobolida genera of Madagascar, Colossobolus and Sanguinobolus were found to be close sister-genera to Aphistogoniulus. Forest destruction has caused forest corridors between populations to disappear

  16. The genus Allium. Part 2.

    Science.gov (United States)

    Fenwick, G R; Hanley, A B

    1985-01-01

    Allium is a genus of some 500 species belonging to the family Liliaceae. However only a few of these are important as food plants, notably onion, garlic, chive, leek, and rakkyo. Such plants have been used for many centuries for the pungency and flavoring value, for their medicinal properties, and, in some parts of the world, their use also has religious connotations. The flavors of members of the genus Alliums, in addition to having certain characteristics, are also complex, being derived enzymically from a number of involatile precursors. In addition to there being variation of flavor between different alliums, there are also considerable changes that occur as a result of cooking and processing. Of course, these are of importance to the consumer and food technologist-processor. The review will introduce the subject by an historical perspective and will set this against data on the present cultivation and usage of commercially cultivated alliums. The chemical composition of these plants will be discussed, emphasis being given to nonvolatile constituents which are, perhaps, less often considered. Discussion of the volatile constituents, which will include mention of the methods currently used for their analysis and for the determination of "flavor strength", will be mainly concerned with literature taken from the last 5 years. In considering the extent and nature of allium cultivation and processing, factors affecting the nutritional value and quality will be highlighted. The medicinal properties of garlic and onion oils have been much studied over the last decade and the review will include critical assessment of this area and also will touch on the more general properties (antimicrobial, antifungal, antibacterial, and insecticidal) of these oils. Finally mention will be made of the antinutritional, toxic, or otherwise undesirable effects of alliums, for example, as inadvertent components of animal diets, tainting of milk and other food products. It is our

  17. The jacoona assemblage of the genus Dundubia Amyot & Serville (Homoptera: Cicadidae): a taxonomic study of its species and a discussion of its phylogenetic relationships

    NARCIS (Netherlands)

    Beuk, Paul L.Th.

    1996-01-01

    The species of Orientopsaltria with unicolorous opercula and three related species of Platylomia are transferred to the genus Dundubia and allocated in the ‘Dundubia jacoona assemblage’ pending further investigation. The assemblage comprises eleven species in total; all are found in the

  18. On RNA-RNA interaction structures of fixed topological genus.

    Science.gov (United States)

    Fu, Benjamin M M; Han, Hillary S W; Reidys, Christian M

    2015-04-01

    Interacting RNA complexes are studied via bicellular maps using a filtration via their topological genus. Our main result is a new bijection for RNA-RNA interaction structures and a linear time uniform sampling algorithm for RNA complexes of fixed topological genus. The bijection allows to either reduce the topological genus of a bicellular map directly, or to lose connectivity by decomposing the complex into a pair of single stranded RNA structures. Our main result is proved bijectively. It provides an explicit algorithm of how to rewire the corresponding complexes and an unambiguous decomposition grammar. Using the concept of genus induction, we construct bicellular maps of fixed topological genus g uniformly in linear time. We present various statistics on these topological RNA complexes and compare our findings with biological complexes. Furthermore we show how to construct loop-energy based complexes using our decomposition grammar. Copyright © 2015 Elsevier Inc. All rights reserved.

  19. Avaliação do feno de Arachis pintoi utilizando o ensaio de digestibilidade in vivo

    Directory of Open Access Journals (Sweden)

    Ladeira Márcio Machado

    2002-01-01

    Full Text Available Utilizaram-se seis ovinos, sem raça definida, para avaliar o consumo e as digestibilidades aparentes totais da matéria seca (MS, matéria orgânica (MO, proteína bruta (PB, extrato etéreo (EE, carboidratos totais (CHO, fibra em detergente neutro (FDN, carboidratos não fibrosos (CNF, fibra em detergente ácido (FDA, celulose (CEL, hemicelulose (HCEL e energia do feno de Arachis pintoi. Também foi determinado o balanço de nitrogênio. Os animais foram colocados em gaiolas metabólicas e receberam apenas o feno de A. pintoi mais sal mineral como componentes da dieta. O Arachis pintoi foi colhido com aproximadamente 100 dias. O fornecimento do feno foi ad libitum, sendo a quantidade calculada para permitir sobras de 20%. O experimento teve 20 dias de duração, sendo 15 dias de adaptação e cinco dias para coletas de amostras do feno, sobras, fezes e urina. Foi utilizado o óxido crômico, em duas doses diárias de 1 g cada, como indicador externo para estimar a produção fecal. Os consumos de MS e MO do A. pintoi foram 90,17 e 85,67 g/kg0,75, respectivamente. Os teores de PB, nutrientes digestíveis totais (NDT e energia metabolizável (EM foram, respectivamente, 14,3%, 66,4% e 2,0 Mcal/kg MS. O balanço de nitrogênio (N foi de 12,1 g/dia e representou 40,2% de todo N consumido. As digestibilidades aparentes totais da MS, MO, PB, EE, CHO, FDN, CNF, FDA, CEL, HCEL e energia foram 64,4, 68,4, 70,0, 63,4, 68,2, 53,6, 93,3, 47,2, 62,8, 66,8 e 63,7%, respectivamente. O feno de Arachis pintoi apresentou consumo e digestibilidades dos nutrientes elevados para uma forrageira, permitindo assim fornecer nutrientes em quantidades suficientes para ganhos de peso satisfatórios, o que dá maior suporte para o uso dessa leguminosa na alimentação de ruminantes.

  20. Palynology of the Genus Stachytarpheta Vahl. (Verbenaceae

    Directory of Open Access Journals (Sweden)

    Olubukola ADEDEJI

    2010-12-01

    Full Text Available The exine morphology of pollen grains of Stachytarpheta indica (Linn. Vahl, Stachytarpheta cayennensis (Rich. Vahl and Stachytarpheta angustifolia (Mill. Vahl is reported. This study was carried out with a light microscope. Pollen grains from fresh anthers were collected and aceolysed. Statistical analysis used to analyse the data collected include cluster analysis, correlation analysis, similarity and distance indices. The pollen grains are spheroidal to oblate to sub-oblate in shape. They are aperturate, both colpate and porate. Tricolpate types occur most frequently, acolpate, monocolpate, bicolpate and tetracolpate types less frequently. The multicolpate and multiporate attributes in all the species indicate that the genus is not primitive in evolutionary history and this species probably, evolved around in the same time. According to the size, the pollen grains of the genus falls into groups permagna (pollen diameter 100-200 ?m and giganta (pollen diameter greater than 200 ?m. S. cayennensis and S. anguistifolia belong to group permagna and S. indica only in the group giganta. This separates S. indica from the other two species. The large pollen grain size in the genus clearly supports the fact that the flowers in the genus are more insect-and-bird pollinated than wind pollinated. The similarity and distance indices of the species showed that S. cayennensis and S. angustifolia are the closest. S. indica is closer to S. angustifolia but farther from S. cayennensis.

  1. Fayochytriomyces, a new genus within Chytridiales.

    Science.gov (United States)

    Davis, William J; Letcher, Peter M; Longcore, Joyce E; Powell, Martha J

    2015-01-01

    Chytriomyces is a complex genus in Chytridiales. The morphological concept of the genus expanded as new taxa were added, and studies of zoospore ultrastructure and molecular phylogenies have revealed the genus to be polyphyletic. One problematic taxon is C. spinosus Fay, a distinctive species characterized by whorls of spines on the zoosporangium and a large accumulation of vesicle material beneath the operculum. With light-, scanning-electron and transmission-electron microscopy, we examined a culture (WJD186) isolated from a muck sample collected from a temporary forest pond. We also analyzed the D1-D2 variable domains of the nuc 28S rDNA (28S) sequences to confirm the phylogenetic placement of the species relative to the type of Chytriomyces, C. hyalinus Karling. The morphology of culture WJD186 is consistent with features Fay described for C. spinosus, and the zoospore ultrastructure is consistent with the Group I-type zoospore characters of Chytriomycetaceae (Chytridiales). In our molecular phylogeny C. spinosus does not group with the type of Chytriomyces. Consequently, we erect a new genus in Chytriomycetaceae and present the new combination Fayochytriomyces spinosus. © 2015 by The Mycological Society of America.

  2. Composite Genus One Belyi Maps

    CERN Document Server

    Vidunas, Raimundas

    2016-01-01

    Motivated by a demand for explicit genus 1 Belyi maps from physics, we give an efficient method of explicitly computing genus one Belyi maps by (1) composing covering maps from elliptic curves to the Riemann surface with the simpler, univariate, genus zero Belyi maps as well as by (2) composing further with isogenies of the elliptic curve. This gives many new explicit dessins on the doubly periodic plane, including several which have been realized in the physics literature as so-called brane-tilings in the context of quiver gauge theories.

  3. Chemodiversity in the genus Aspergillus

    DEFF Research Database (Denmark)

    Frisvad, Jens Christian; Larsen, Thomas Ostenfeld

    2015-01-01

    to be characterized. The genus Aspergillus is cladistically holophyletic but phenotypically polythetic and very diverse and is associated to quite different sexual states. Following the one fungus one name system, the genus Aspergillus is restricted to a holophyletic clade that include the morphologically different...... biosynthetic family isoextrolites. However, it appears that secondary metabolites from one Aspergillus section have analogous metabolites in other sections (here also called heteroisoextrolites). In this review, we give a genus-wide overview of secondary metabolite production in Aspergillus species. Extrolites...

  4. Genetic transformation of peanut (Arachis hypogaea L.) using cotyledonary node as explant and a promoterless gus::nptII fusion gene based vector

    Indian Academy of Sciences (India)

    T Swathi Anuradha; S K Jami; R S Datla; P B Kirti

    2006-06-01

    We have generated putative promoter tagged transgenic lines in Arachis hypogaea cv JL-24 using cotyledonary node (CN) as an explant and a promoterless gus::nptII bifunctional fusion gene mediated by Agrobacterium transformation. MS medium fortified with 6-benzylaminopurine (BAP) at 4 mg/l in combination with 0.1 mg/l -napthaleneacetic acid (NAA) was the most effective out of the various BAP and NAA combinations tested in multiple shoot bud formation. Parameters enhancing genetic transformation viz. seedling age, Agrobacterium genetic background and co-cultivation periods were studied by using the binary vector p35SGUSINT. Genetic transformation with CN explants from 6-dayold seedlings co-cultivated with Agrobacterium GV2260 strain for 3 days resulted in high kanamycin resistant shoot induction percentage (45%); approximately 31% transformation frequency was achieved with p35S GUSINT in -glucuronidase (GUS) assays. Among the in vivo GUS fusions studied with promoterless gus::nptII construct, GUS-positive sectors occupied 38% of the total transient GUS percentage. We have generated over 141 putative T0 plants by using the promoterless construct and transferred them to the field. Among these, 82 plants survived well in the green house and 5 plants corresponding to 3.54% showed stable integration of the fusion gene as evidenced by GUS, polymerase chain reaction (PCR) and Southern blot analyses. Twenty-four plants were positive for GUS showing either tissue-specific expression or blue spots in at least one plant part. The progeny of 15 T0 plants indicated Mendelian inheritance pattern of segregation for single-copy integration. The tissue-specific GUS expression patterns were more or less similar in both T0 and corresponding T1 progeny plants. We present the differential patterns of GUS expression identified in the putative promoter-tagged transgenic lines in the present communication.

  5. Influence of substrates and in vitro preconditioning treatments on ex vitro acclimatization of Arachis retusa Influência de substratos e de pré-tratamentos in vitro na aclimatização ex vitro de Arachis retusa

    Directory of Open Access Journals (Sweden)

    Georgia Pacheco

    2006-01-01

    Full Text Available The objective of this work was to evaluate the influence of substrate and preconditioning treatments on the acclimatization of in vitro plants of Arachis retusa. Plants were transferred to Plantmax or sand, and fertilized with Hoagland's nutrient solution. Plants maintained in sand, with or without fertilizer, showed the highest survival rates. In order to evaluate the influence of in vitro preconditioning treatments, stem segments were cultured on MS medium supplemented with different sucrose concentrations. The highest survival and developmental rates were observed in plants from two accessions cultured on MS supplemented with 1.5% and 3% sucrose. Flowering and fruit production were observed after five months.O objetivo deste trabalho foi avaliar a influência de diferentes substratos e pré-tratamentos in vitro, na aclimatização de plantas in vitro de Arachis retusa. As plantas foram transferidas para Plantmax ou areia e adubadas com solução de Hoagland. Plantas mantidas em areia, com adubação ou sem adubação, apresentaram maiores taxas de sobrevivência. Para avaliação da influência de pré-tratamentos in vitro, segmentos de caule foram cultivados em meio MS suplementado com diferentes concentrações de sacarose. As maiores taxas de sobrevivência e desenvolvimento foram observadas em plantas cultivadas em sacarose a 1,5% e 3%. Depois de cinco meses, foram observadas a floração e a produção de frutos.

  6. Cloning and Characterization of AhFT in Peanut (Arachis hypogaea)%花生 AhFT 基因的克隆与序列分析

    Institute of Scientific and Technical Information of China (English)

    葛姗姗; 唐桂英; 陈霞霞; 付旭; 柳展基; 毕玉平

    2014-01-01

    FT (Flowering Locus T ) encoding florigens plays important roles in the control of the transi-tion between vegetative and reproductive growth and promoting flowering.In this study, a cDNA encoding the FT homologue was isolated from peanut (Arachis hypogaea ) by RT-PCR and named as AhFT . Sequence analysis indicated that the cDNA of AhFT was 893 bp long and contained a single open reading frame with 534 bp in length.The predicted AhFT protein has 177 amino acids with an estimated molecular mass of 19.95 kD and an isoelectric point of 6.9.Phylogenetic analysis showed AhFT belonged to the FT-like subfamily.These results indicate AhFT may play important roles in flowering.%FT (Flowering Locus T )作为“成花素”在成花转变及促进开花上起重要作用。本研究利用分子克隆和 RT-PCR 方法,从花生中克隆了一个与 FT 同源的 cDNA 序列,命名为 AhFT,该序列长度为893 bp,开放阅读框长度为534 bp,推测编码蛋白含有177个氨基酸,分子量为19.95 kD,等电点为6.9。通过与其他植物 PEBP 蛋白序列的比对,发现花生 FT 基因属于 FT-Like 家族,可能在控制植物开花中起重要作用。

  7. Análise de crescimento em amendoinzeiro (Arachis hypogaea L. submetido à matocompetição Analysis of peanut growth under a weed control

    Directory of Open Access Journals (Sweden)

    Luiz Mauro Barbosa

    1995-07-01

    Full Text Available Foram verificados os efeitos de diferentes períodos de controle e convivência de plantas daninhas (0; 14; 28; 42; 56; 70; 84 e 98 dias na cultura do amendoinzeiro (Arachis hypogaea L. em Moji-Guaçu (SP. As principais espécies invasoras da área experimental foram: Acanthospermum australe (Loef. O. Kuntz, Waltheria indica L., Borreria alata DC., Richardia scabra L., Rhynchelytrum repens (Nees Stapf. et Hubb. e Diodia teres Walt. De maneira geral, durante quase todo o ciclo, a espécie de maior importância relativa foi A. australe, sendo suplantada por outras espécies apenas na colheita, quando já estava encerrando seu ciclo de desenvolvimento. O período inicial de controle das plantas daninhas, além de reduzir a densidade da comunidade infestante, diminuiu sua riqueza em espécies e alterou a importância relativa das populações. A matocompetição resultou na redução do crescimento do amendoinzeiro, principalmente a partir de 42 dias de convivência, afetando a altura das plantas, a área foliar, o índice de área foliar e o acúmulo epígeo de matéria seca. Não foram afetados os números de ramos e de folíolos por planta, nem a qualidade dos grãos e o vigor das sementes do amendoim. A produção de frutos foi reduzida ao redor de 31,5% em decorrência da interferência das plantas daninhas. O período total de prevenção da interferência na produção foi de 14 dias e o período anterior à interferência foi de 70 dias.Effects of different periods (0-14-28-42-56-70-84 and 98 days of weed control in peanut plants (Arachis hypogaea L. were studied in Moji-Guaçu region (State of São Paulo. The main weed species in the experimental area were: Acanthospermum australe (Loef. O. Kuntz, Waltheria indica L.; Borreria alata D.C.; Richardia scabra L.; Rhynchelytrum repens (Ness Stapf. et Hubb and Diodia teres Walt. During the whole peanut life cycle, except at harvest time, the most important weed species was A. australe. The

  8. Data in support of proteome analysis of gynophores and early swelling pods of peanut (Arachis hypogaea L.

    Directory of Open Access Journals (Sweden)

    Han Xia

    2015-12-01

    Full Text Available Different from most of other plants, peanut (Arachis hypogaea L. is a typical geocarpic species which flowering and forming pegs (gynophores above the ground. Pegs penetrate into soil for embryo and pod development. To investigate the molecular mechanism of geocarpy feature of peanut, the proteome profiles of aerial grown gynophores (S1, subterranean unswollen gynophores (S2, and gynophores that had just started to swell into pods (S3 were analyzed by combining 1 DE with nano LC–MS/MS approaches. The proteomic data provided valuable information for understanding pod development of peanut. The data described here can be found in the PRIDE Archive using the reference number PXD002579-81. A more comprehensive analysis of this data may be obtained from the article in BMC Plant Biology (Zhao et al., 2015 [1].

  9. The genus Cladosporium.

    Science.gov (United States)

    Bensch, K; Braun, U; Groenewald, J Z; Crous, P W

    2012-06-15

    A monographic revision of the hyphomycete genus Cladosporium s. lat. (Cladosporiaceae, Capnodiales) is presented. It includes a detailed historic overview of Cladosporium and allied genera, with notes on their phylogeny, systematics and ecology. True species of Cladosporium s. str. (anamorphs of Davidiella), are characterised by having coronate conidiogenous loci and conidial hila, i.e., with a convex central dome surrounded by a raised periclinal rim. Recognised species are treated and illustrated with line drawings and photomicrographs (light as well as scanning electron microscopy). Species known from culture are described in vivo as well as in vitro on standardised media and under controlled conditions. Details on host range/substrates and the geographic distribution are given based on published accounts, and a re-examination of numerous herbarium specimens. Various keys are provided to support the identification of Cladosporium species in vivo and in vitro. Morphological datasets are supplemented by DNA barcodes (nuclear ribosomal RNA gene operon, including the internal transcribed spacer regions ITS1 and ITS2, the 5.8S nrDNA, as well as partial actin and translation elongation factor 1-α gene sequences) diagnostic for individual species. In total 993 names assigned to Cladosporium s. lat., including Heterosporium (854 in Cladosporium and 139 in Heterosporium), are treated, of which 169 are recognized in Cladosporium s. str. The other taxa are doubtful, insufficiently known or have been excluded from Cladosporium in its current circumscription and re-allocated to other genera by the authors of this monograph or previous authors. Cladosporium allicinum (Fr.: Fr.) Bensch, U. Braun & Crous, comb. nov., C. astroideum var. catalinense U. Braun, var. nov., Fusicladium tectonicola (Yong H. He & Z.Y. Zhang) U. Braun & Bensch, comb. nov., Septoidium uleanum (Henn.) U. Braun, comb. nov., Zasmidium adeniae (Hansf.) U. Braun, comb. nov., Zasmidium dianellae (Sawada

  10. The genus Cladosporium

    Science.gov (United States)

    Bensch, K.; Braun, U.; Groenewald, J.Z.; Crous, P.W.

    2012-01-01

    A monographic revision of the hyphomycete genus Cladosporium s. lat. (Cladosporiaceae, Capnodiales) is presented. It includes a detailed historic overview of Cladosporium and allied genera, with notes on their phylogeny, systematics and ecology. True species of Cladosporium s. str. (anamorphs of Davidiella), are characterised by having coronate conidiogenous loci and conidial hila, i.e., with a convex central dome surrounded by a raised periclinal rim. Recognised species are treated and illustrated with line drawings and photomicrographs (light as well as scanning electron microscopy). Species known from culture are described in vivo as well as in vitro on standardised media and under controlled conditions. Details on host range/substrates and the geographic distribution are given based on published accounts, and a re-examination of numerous herbarium specimens. Various keys are provided to support the identification of Cladosporium species in vivo and in vitro. Morphological datasets are supplemented by DNA barcodes (nuclear ribosomal RNA gene operon, including the internal transcribed spacer regions ITS1 and ITS2, the 5.8S nrDNA, as well as partial actin and translation elongation factor 1-α gene sequences) diagnostic for individual species. In total 993 names assigned to Cladosporium s. lat., including Heterosporium (854 in Cladosporium and 139 in Heterosporium), are treated, of which 169 are recognized in Cladosporium s. str. The other taxa are doubtful, insufficiently known or have been excluded from Cladosporium in its current circumscription and re-allocated to other genera by the authors of this monograph or previous authors. Taxonomic novelties: Cladosporium allicinum (Fr.: Fr.) Bensch, U. Braun & Crous, comb. nov., C. astroideum var. catalinense U. Braun, var. nov., Fusicladium tectonicola (Yong H. He & Z.Y. Zhang) U. Braun & Bensch, comb. nov., Septoidium uleanum (Henn.) U. Braun, comb. nov., Zasmidium adeniae (Hansf.) U. Braun, comb. nov., Zasmidium

  11. A review of the genus Hyoscyamus (Solanaceae in Iran

    Directory of Open Access Journals (Sweden)

    شادی حاج رسولیها

    2015-12-01

    Full Text Available The genus Hyoscyamus is belonging to the family Solanaceae. This genus with 12-19 species has a wide range of distribution in Iran. In different flora, some species of this genus are synonym due the similar morphology. Three subgenera are introduced for genus namely Hyoscyamus, Parahyoscyamus and Dendrotrichon in Iran. For accurate survey done the general review on this genus. For morphological studies the images of calyx species were plotted with stereo microscope with specified enlarge. For numerical taxonomy studies 42 qualitative and quantitative morphological characters were selected and analyzed with SPSS software with three methods cluster, PCA and FA. Then the results of analysis compared and reconciled with data from various studies conducted on this genus. Survey data confirmed the approximation of two species H.tenuicaulis and H. bornmulleri and H. bornmulleri is the synonym of H. tenuicaulis. Also, H. malekianus transferred from subgen. Parahyoscyamus to subgen. Dendrotrichon. Finally, a key to all species of the genus Hyoscyamus in Iran is provided.

  12. A comparative study of the capsaicinoid and phenolic contents and in vitro antioxidant activities of the peppers of the genus Capsicum: an application of chemometrics

    OpenAIRE

    Sora, Gisele Teixeira Souza; Haminiuk, Charles Windson Isidoro; da Silva, Marcos Vieira; Zielinski,Acácio Antonio Ferreira; Gonçalves, Geferson Almeida; Bracht, Adelar; Peralta,Rosane Marina

    2015-01-01

    This paper presents a comparison of the contents of capsaicin, dihydrocapsaicin and total phenolics as well as of the antioxidant activities of six types of peppers of the genus Capsicum. The varieties were analyzed in terms of their in vitro antioxidant activity using ferric reducing antioxidant powder (FRAP), 1,1-diphenyl-2-picrylhydrazyl (DPPH) and 2,2’-azinobis 3-ethylbenzothiazoline 6-sulfonate (ABTS●+) assays. The contents of phenolics and capsainoids as well as the antioxidant activiti...

  13. Revision of the genus Phaeanthus (Annonaceae)

    NARCIS (Netherlands)

    Mols, J.B.; Keßler, P.J.A.

    2000-01-01

    A revision of the genus Phaeanthus Hook.f. & Thomson (Annonaceae) is presented. The genus comprises 8 species. A key to the fruiting and/or flowering specimens of the genus is included. The genus consists of shrubs to small-sized trees from Malesia and Vietnam. It is characterised by sepals and

  14. A SYSTEMATIC STUDY OF THE GENUS MYATIS BATES FROM CHINA AND ADJACENT AREAS (COLEOPTERA, TENEBRIONIDAE)%小刺甲属系统学研究(鞘翅目,拟步甲科)

    Institute of Scientific and Technical Information of China (English)

    孟磊; 任国栋

    2005-01-01

    The genus Myatis Bates, 1879 is studied in systematics. The genus is mainly distributed in China and the countries around China. Seven species including two new species, Myatis brevipilosum sp. nov. and M. nagquana sp. nov., arerecorded. Photographs of adults of known species and illustrations of new species are provided. A key to known species of the genus is given. A phylogenetic analysis based on the morphological features of adults is also included. All type specimens are preserved in the Museum of Hebei University.%对中国及其毗邻地区的小刺甲属Myatis Bates,1879进行了系统学研究,共记录7种,绘制了新种和已知种的特征图和的成虫照片,编制了世界小刺甲属已知种检索表,并对该属的系统进化关系进行了初步的支序分析.标本保存在河北大学博物馆.新种描述如下.

  15. Una nueva especie trifoliolada de Arachis (Fabaceae y comentarios adicionales sobre la sección taxonómica Trierectoides

    Directory of Open Access Journals (Sweden)

    José F. M. Valls

    2017-06-01

    Full Text Available Se describe una nueva especie de Arachis, con hojas trifolioladas, A. sesquijuga. Esta se diferencia de las otras especies trifolioladas, ambas con folíolos ternados, por la presencia de un raquis evidente, lo que caracteriza a la hoja como pinnada. Datos históricos sobre la acumulación de conocimiento referente a las raras especies trifolioladas son comentados en secuencia cronológica.

  16. Isolation and characterization of symbiotic mutants of bradyrhizobium sp. (Arachis) strain NC92: mutants with host-specific defects in nodulation and nitrogen fixation.

    OpenAIRE

    Wilson, K. J.; Anjaiah, V; Nambiar, P T; Ausubel, F M

    1987-01-01

    Random transposon Tn5 mutagenesis of Bradyrhizobium sp. (Arachis) strain NC92, a member of the cowpea cross-inoculation group, was carried out, and kanamycin-resistant transconjugants were tested for their symbiotic phenotype on three host plants: groundnut, siratro, and pigeonpea. Two nodulation (Nod- phenotype) mutants were isolated. One is unable to nodulate all three hosts and appears to contain an insertion in one of the common nodulation genes (nodABCD); the other is a host-specific nod...

  17. Some adaptational peculiarities of introduced species of the genus Hydrangea

    Directory of Open Access Journals (Sweden)

    V. N. Kuchma

    2006-03-01

    Full Text Available Among studied the Hydrangea L. genus the species, which most adapted to the environment of steppe conditions, were developed. H. cinerea Stall. and H. bretschneider Dipp. are recommended for use in laying out of parks, etc.

  18. Notes on genus Eurydoxa Filipjev (Lepidoptera: Tortricidae) in China

    Institute of Scientific and Technical Information of China (English)

    BYUN Bong-Kyu; YAN Shan-chun; LI Cheng-de

    2003-01-01

    Genus Eurydoxa Filipjev in China is reviewed and noted for the first time. Based on the present study, two species are recognized, including rhodopa Diakonoff and advena Filipjev. All available information for the species is reviewed and provided.

  19. Produção de novilhas de corte em pastagem de Coastcross-1 consorciada com Arachis pintoi com e sem adubação nitrogenada Beef heifer production in Coastcross-1 and Arachis pintoi mixed pasture with or without nitrogen fertilization

    Directory of Open Access Journals (Sweden)

    Wagner Paris

    2009-01-01

    Full Text Available Este trabalho foi realizado com o objetivo de avaliar a massa de forragem (MF, a taxa de acúmulo diário (TAD, a oferta de forragem (OF, a taxa de lotação (TL, a porcentagem de Arachis pintoi (PAR, o ganho médio diário (GMD e o ganho por hectare (GPV/ha de novilhas de corte em pastejo de Coastcross-1 consorciada com Arachis pintoi. Os consórcios avaliados foram: CA0 = coastcross + Arachis pintoi sem adubação nitrogenada; CA100 = coastcross + Arachis pintoi com 100 kg de nitrogênio; CA200 = coastcross + Arachis pintoi com 200 kg de nitrogênio; e C200 = coastcross com 200 kg de nitrogênio, distribuídos em delineamento de blocos ao acaso, com duas repetições. O manejo do pasto foi o de lotação continua com carga animal variável utilizando-se novilhas mestiças com três animais-testes por consórcio. A massa de forragem nas pastagens de coastcross + Arachis pintoi adubadas com 0, 100 e 200 kg de nitrogênio e na pastagem de coastcross adubada com 200 kg de nitrogênio foi de 2.641, 2.431, 2.760 e 2.704 kg de MS/ha, respectivamente. A taxa de acúmulo diário foi semelhante (66,12 kg de MS/ha entre as pastagens; o verão foi a estação de maior produção, seguido da primavera, do outono, que não diferiram entre si, e do inverno (108,6; 71,1; 54,2; 30,6 kg de MS/ha, respectivamente. Na associação de coastcross + Arachis pintoi sem adubação nitrogenada, foram obtidas a maior oferta de forragem e a menor taxa de lotação (4,0 UA/ha. As maiores taxas de lotação e as menores ofertas de forragem foram observadas com a adubação nitrogenada. A porcentagem de Arachis pintoi foi maior na primavera e, na associação coastcross + Arachis pintoi sem adubação, as estimativas visuais foram sempre superiores às medidas, em virtude do baixo teor de matéria seca dessa leguminosa. O ganho médio diário foi maior no cultivo em consórcio e adubação com 200 kg de nitrogênio e na pastagem de coastcross em cultivo exclusivo com 200 kg

  20. [Advances of chemical constituents and pharmacological activities of Myristica genus].

    Science.gov (United States)

    Zhang, Yong; Zhang, Juan-Juan; Kang, Wen-Yi; Yan, Wen-Yi

    2014-07-01

    The genus Myristica (Myristicaceae) consists of 120 species, which were distributed in South Asia, from west Polynesia, Oceania, eastern India to the Philippines. Phytochemical studies showed that 164 compounds including a majority of lignans, along with phenglpropanoids, flavonoids and phenolics, have been isolated from this genus, which exhibited anti-microbial, anti-inflammatory, anticancer, hyperglycemic and hepatic protective activities. This article summarizes research progress of the chemical compositions and their pharmacological activities from this genus, which could provide reference for the in-depth development and utilization of the Myristica plants.

  1. The genus Plectranthus in India and its chemistry.

    Science.gov (United States)

    Waldia, Shobha; Joshi, Bipin C; Pathak, Uma; Joshi, Mukesh C

    2011-02-01

    Phytochemical constituents isolated from Indian species of the genus Plectranthus reported up to 2009 are compiled. In India, the genus Plectranthus is found in all the habitats and altitudes, particularly in the Himalaya, the Southern Ghats, and the Nilgiri region. P. amboinicus, P. barbatus, P. caninus, P. mollis, P. coetsa, and P. incanus are the most common species found in India. Phytochemical studies of the genus revealed that Indian Plectranthus species are rich in essential oil, and that the most abundant secondary metabolites are diterpenoids, i.e., labdanes, abietanes, and ent-kauranes, as well as triterpenoids.

  2. Bioactive phytoconstituents and plant extracts from genus Heliotropium

    Directory of Open Access Journals (Sweden)

    Naveen Goyal

    2014-01-01

    Full Text Available Heliotropium is a genus of herbs and rarely shrubs of family Boraginaceae. Heliotropium species have been used in folk medicine for the treatment of gout, rheumatism and as antiseptic, febrifuge, cholagogue, anti-inflammatory and healing agents. The alkaloids mainly pyrrolizidine alkaloids are the main constituents of Heliotropium species, which are responsible for several biological activities viz. anti-tumoural, anti-microbial, and anti-viral effects. Phenolic compounds, terpenoids, and quinones have also been reported in this genus. The present review summarizes the various biological studies done on the extracts and bioactive phytoconstituents from the plants of the genus Heliotropium over the past few decades.

  3. Systematic Review of Chemical Constituents in the Genus Lycium (Solanaceae

    Directory of Open Access Journals (Sweden)

    Dan Qian

    2017-06-01

    Full Text Available The Lycium genus is widely used as a traditional Chinese medicine and functional food. Many of the chemical constituents of the genus Lycium were reported previously. In this review, in addition to the polysaccharides, we have enumerated 355 chemical constituents and nutrients, including 22 glycerogalactolipids, 29 phenylpropanoids, 10 coumarins, 13 lignans, 32 flavonoids, 37 amides, 72 alkaloids, four anthraquinones, 32 organic acids, 39 terpenoids, 57 sterols, steroids, and their derivatives, five peptides and three other constituents. This comprehensive study could lay the foundation for further research on the Lycium genus.

  4. Genomes-based phylogeny of the genus Xanthomonas

    Directory of Open Access Journals (Sweden)

    Rodriguez-R Luis M

    2012-03-01

    Full Text Available Abstract Background The genus Xanthomonas comprises several plant pathogenic bacteria affecting a wide range of hosts. Despite the economic, industrial and biological importance of Xanthomonas, the classification and phylogenetic relationships within the genus are still under active debate. Some of the relationships between pathovars and species have not been thoroughly clarified, with old pathovars becoming new species. A change in the genus name has been recently suggested for Xanthomonas albilineans, an early branching species currently located in this genus, but a thorough phylogenomic reconstruction would aid in solving these and other discrepancies in this genus. Results Here we report the results of the genome-wide analysis of DNA sequences from 989 orthologous groups from 17 Xanthomonas spp. genomes available to date, representing all major lineages within the genus. The phylogenetic and computational analyses used in this study have been automated in a Perl package designated Unus, which provides a framework for phylogenomic analyses which can be applied to other datasets at the genomic level. Unus can also be easily incorporated into other phylogenomic pipelines. Conclusions Our phylogeny agrees with previous phylogenetic topologies on the genus, but revealed that the genomes of Xanthomonas citri and Xanthomonas fuscans belong to the same species, and that of Xanthomonas albilineans is basal to the joint clade of Xanthomonas and Xylella fastidiosa. Genome reduction was identified in the species Xanthomonas vasicola in addition to the previously identified reduction in Xanthomonas albilineans. Lateral gene transfer was also observed in two gene clusters.

  5. Analysis of synonymous codon usage patterns in the genus Rhizobium.

    Science.gov (United States)

    Wang, Xinxin; Wu, Liang; Zhou, Ping; Zhu, Shengfeng; An, Wei; Chen, Yu; Zhao, Lin

    2013-11-01

    The codon usage patterns of rhizobia have received increasing attention. However, little information is available regarding the conserved features of the codon usage patterns in a typical rhizobial genus. The codon usage patterns of six completely sequenced strains belonging to the genus Rhizobium were analysed as model rhizobia in the present study. The relative neutrality plot showed that selection pressure played a role in codon usage in the genus Rhizobium. Spearman's rank correlation analysis combined with correspondence analysis (COA) showed that the codon adaptation index and the effective number of codons (ENC) had strong correlation with the first axis of the COA, which indicated the important role of gene expression level and the ENC in the codon usage patterns in this genus. The relative synonymous codon usage of Cys codons had the strongest correlation with the second axis of the COA. Accordingly, the usage of Cys codons was another important factor that shaped the codon usage patterns in Rhizobium genomes and was a conserved feature of the genus. Moreover, the comparison of codon usage between highly and lowly expressed genes showed that 20 unique preferred codons were shared among Rhizobium genomes, revealing another conserved feature of the genus. This is the first report of the codon usage patterns in the genus Rhizobium.

  6. Regeneration and genetic transformation in the Vitis genus = [Regeneratie en genetische transformatie in het genus Vitis =

    NARCIS (Netherlands)

    Martinelli, L.

    1997-01-01


    This work is a contribution to the development of regeneration systems and genetic transformation in the Vitis genus and opens interesting perspectives to the application of molecular techniques for study interesting traits, as well as for genetic improvement of

  7. Genus Schistochila Dumort. (Schistochilaceae, Marchantiophyta in Thailand

    Directory of Open Access Journals (Sweden)

    Wanwisa Juengprayoon

    2015-08-01

    Full Text Available A review of the genus Schistochila Dumort. in Thailand is presented, based on the study of fresh and herbarium specimens. Five species are recognized, namely S. aligera (Nees & Blume J.B. Jack & Steph., S. blumei (Nees Trevis., S. nuda Horik., S. sciurea (Nees Schiffn., and S. yakushimensis Ohnishi & Deguchi. In addition, a key to species, descriptions and line drawings are provided, and notes on the ecology and geographical distribution of the species.

  8. Bounds for Siegel Modular Forms of genus 2 modulo $p$

    CERN Document Server

    Choi, Dohoon; Kikuta, Toshiyuki

    2011-01-01

    Sturm obtained the bounds for the number of the first Fourier coefficients of elliptic modular form $f$ to determine vanishing of $f$ modulo a prime $p$. In this paper, we study analogues of Sturm's bound for Siegel modular forms of genus 2. We show the resulting bound is sharp. As an application, we study congruences involving Atkin's $U(p)$-operator for the Fourier coefficients of Siegel mdoular forms of genus 2.

  9. Study on Monitoring Model for Nitrogen Accumulation in Peanut (Arachis Hypogasa L.) Leaves Based on Hyper- Spectral Remote Sensing%基于高光谱遥感的花生叶片氮积累量监测模型的研究

    Institute of Scientific and Technical Information of China (English)

    张晓艳; 王丽丽; 刘锋; 封文杰; 刘淑云; 朱建华

    2012-01-01

    作物氮素状况是评价长势、提高产量和改善品质的重要指标,因此叶片氮积累量的实时无损估测对作物生产的氮素管理具有重要意义.本研究选用大花生品种丰花1号为试验材料,在大田生产条件下,分析了花生叶片氮积累量与冠层高光谱参数的定量关系.结果表明,叶片氮素含量随生育进程逐渐下降,不同处理之间差异较小;叶片氮素积累量随生育时期推进呈现先升后降的单峰曲线变化趋势,在结荚期达到高峰.花生冠层光谱反射率在740 ~1100nm波段内随叶片氮积累量的增加而增加,叶片氮积累量的敏感波段主要存在于近红外平台和可见光区,其中,“红边”区域表现最为显著.通过微分等技术构造多种植被指数,对高光谱参数和叶片氮积累量进行相关回归分析,红边振幅(Dr)、氮素反射指数(NRI)、归一化植被指数(NDVI)各波段组合平均值及比值植被指数( RVI)与叶片氮积累量关系最密切,方程拟合决定系数分别为0.9194、0.8984、0.8918、0.8899、0.8794、0.8797.经另外一组独立数据的检验表明,对叶片氮积累量的预测以红边位置(REP)和Dr两个参数表现最优,预测的根均方差(RMSE)分别为1.78和1.10,相对误差为5.29%和3.59%.NDVI[ Average(1230,1240,1250,1260),640]和土壤调整植被指数(SAVI)两个光谱参数预测的RMSE分别为1.15和1.19,预测相对误差为5.42%和7.41%.比较而言,Dr为自变量建立的模型,可以更好地评估不同条件下叶片氮素积累状况.%Nitrogen condition of crops was an important indicator for evaluating growth vigor, increasing yield and improving quality, so it was significant of real - time and lossless estimation of nitrogen accumulation in leaves for nitrogen management during crop production. In this study, the peanut variety Fenghua 1 with large seed was used as experimental material to study the relationship between nitrogen accumulation in

  10. THE GENUS CULLENIA Wight * (Bombacaceae

    Directory of Open Access Journals (Sweden)

    A. J. G. H. KOSTERMANS

    1956-12-01

    Full Text Available The monotypic genus Cullenia was established by Wight (IconesPI. Ind. or. 5 (1 : pi. 1761—62 & text, 1851, who differentiated it fromDurio Adans. mainly by the lack of a corolla and the position and shapeof the anthers. The only species, originally described as Durio ceylanicusby Gardner, was cited by Wight as Cullenia excelsa Wight. K. Schumanncorrected the specific epithet rather casually and atributed it (wronglyto Wight. Bentham (in Benth. & Hook., Gen. pi. 1: 212. 1867; Baillon(Hist. pi. 4: 159. 1872, Masters (in Hook, f., Fl. Br. Ind. 1: 350. 1874and Beccari (Malesia 3: 219. 1889 accepted the genus.Bakhuizen van den Brink (in Bull. Jard. bot. Buitenzorg III, 6: 228.1924 incorporated the genus in Durio.In my opinion Cullenia represents a "good" genus by its lack ofcorolla. Alston, although accepting Bakhuizen's reduction, informed mepersonally, that he, too, is inclined to consider Cullenia different fromDurio.The pollen were described as being naked and pedicellate by Gardner;this wrong statement was corrected by Wight; the anthers are pedicellateand one-celled.In this paper a new Cullenia species is described, which strengthensthe position of the genus; both species are restricted to the rain forestregion of Ceylon and the Southern Indian Peninsula.

  11. Identity of Baker's species described in the Oriental leafhopper genus Pythamus (Hemiptera: Cicadellidae) with description of a new genus.

    Science.gov (United States)

    Wei, Cong; Webb, Michael D; Zhang, Yalin

    2014-01-01

    Baker's (1915) species described in the Oriental leafhopper genus Pythamus Melichar are revised. One species, Pythamus melichari Baker 1915, is placed in a new genus, Pythochandra Wei & Webb, gen. n.. The four varieties of P. melichari described by Baker (1915, 1923) (borneensis, bilobatus, decoratus and singaporensis) are elevated to species level and placed in the new genus stat. n., comb. n.. All species are briefly described and a key is provided for their separation. Two other species, Pythamus productus Baker and P. decoratus Baker, known only from females, are retained in Pythamus pending further studies.

  12. Molecular phylogeny and systematic revision of the pleurocarpous moss genus Plagiothecium

    DEFF Research Database (Denmark)

    Wynns, Justin Thomas

    A systematic investigation of the pleurocarpous moss genus Plagiothecium Bruch & Schimp. was performed as a part of the author’s PhD study at the University of Copenhagen. Plagiothecium is mostly a well-defined genus, but the species limits and the interspecific relationships are poorly understoo...... to refine the taxonomy of the genus as a whole. A number of new taxa are described, several nomenclatural novelties are proposed, and an improved sectional classification of the genus is offered. A synopsis of the genus is also provided as a contribution toward a worldwide revision....

  13. Gene order phylogeny of the genus Prochlorococcus.

    Directory of Open Access Journals (Sweden)

    Haiwei Luo

    Full Text Available BACKGROUND: Using gene order as a phylogenetic character has the potential to resolve previously unresolved species relationships. This character was used to resolve the evolutionary history within the genus Prochlorococcus, a group of marine cyanobacteria. METHODOLOGY/PRINCIPAL FINDINGS: Orthologous gene sets and their genomic positions were identified from 12 species of Prochlorococcus and 1 outgroup species of Synechococcus. From this data, inversion and breakpoint distance-based phylogenetic trees were computed by GRAPPA and FastME. Statistical support of the resulting topology was obtained by application of a 50% jackknife resampling technique. The result was consistent and congruent with nucleotide sequence-based and gene-content based trees. Also, a previously unresolved clade was resolved, that of MIT9211 and SS120. CONCLUSIONS/SIGNIFICANCE: This is the first study to use gene order data to resolve a bacterial phylogeny at the genus level. It suggests that the technique is useful in resolving the Tree of Life.

  14. Monotone Hurwitz numbers in genus zero

    CERN Document Server

    Goulden, I P; Novak, Jonathan

    2012-01-01

    Hurwitz numbers count branched covers of the Riemann sphere with specified ramification data, or equivalently, transitive permutation factorizations in the symmetric group with specified cycle types. Monotone Hurwitz numbers count a restricted subset of the branched covers counted by the Hurwitz numbers, and have arisen in recent work on the the asymptotic expansion of the Harish-Chandra-Itzykson-Zuber integral. In this paper we begin a detailed study of monotone Hurwitz numbers. We prove two results that are reminiscent of those for classical Hurwitz numbers. The first is the monotone join-cut equation, a partial differential equation with initial conditions that characterizes the generating function for monotone Hurwitz numbers in arbitrary genus. The second is our main result, in which we give an explicit formula for monotone Hurwitz numbers in genus zero.

  15. On genus expansion of superpolynomials

    CERN Document Server

    Mironov, A; Sleptsov, A; Smirnov, A

    2013-01-01

    Recently it was shown that the (Ooguri-Vafa) generating function of HOMFLY polynomials is the Hurwitz partition function, i.e. that the dependence of the HOMFLY polynomials on representation is naturally captured by symmetric group characters (cut-and-join eigenvalues). The genus expansion and expansion through Vassiliev invariants explicitly demonstrate this phenomenon. In the present letter we claim that the superpolynomials are not functions of such a type: symmetric group characters do not provide an adequate linear basis for their expansions. Deformation to superpolynomials is, however, straightforward in the multiplicative basis:the Casimir operators are beta-deformed to Hamiltonians of the Calogero-Moser-Sutherland system. Applying this trick to the genus and Vassiliev expansions, we observe that the deformation is rather straightforward only for the thin knots. Beyond this family additional algebraically independent terms appear in the Vassiliev and genus expansions. This can suggest that the superpol...

  16. Strong embeddings of minimum genus

    CERN Document Server

    Mohar, Bojan

    2009-01-01

    A "folklore conjecture, probably due to Tutte" (as described in [P.D. Seymour, Sums of circuits, Graph theory and related topics (Proc. Conf., Univ. Waterloo, 1977), pp. 341-355, Academic Press, 1979]) asserts that every bridgeless cubic graph can be embedded on a surface of its own genus in such a way that the face boundaries are cycles of the graph. In this paper we consider closed 2-cell embeddings of graphs and show that certain (cubic) graphs (of any fixed genus) have closed 2-cell embedding only in surfaces whose genus is very large (proportional to the order of these graphs), thus providing plethora of strong counterexamples to the above conjecture. The main result yielding such counterexamples may be of independent interest.

  17. Heterogeneity in the genus Allovahlkampfia and the description of the new genus Parafumarolamoeba (Vahlkampfiidae; Heterolobosea).

    Science.gov (United States)

    Geisen, Stefan; Bonkowski, Michael; Zhang, Junling; De Jonckheere, Johan F

    2015-08-01

    Heterolobosean amoebae are common and diverse members of soil protist communities. In this study, we isolated seven strains of amoebae from soil samples taken in Tibet (at high altitude), Sardinia and the Netherlands, all resembling to belong to a similar heterolobosean morphospecies. However, sequences of the small subunit (SSU) rDNA and internal transcribed spacers, including the 5.8S rDNA, revealed a high heterogeneity in the genus Allovahlkampfia to which six of the isolates belong. Some unnamed strains, of which the sequences had been published before, are also included within the genus Allovahlkampfia. One Allovahlkampfia isolated in the Netherlands harbors a twin-ribozyme, containing a His-Cys box, similar to the one found in strain BA of Allovahlkampfia. The other SSU rDNA sequence grouped in phylogenetic analyses with sequences obtained in environmental sequencing studies as sister to the genus Fumarolamoeba. This phylogenetic placement was supported by analyses of the 5.8S rDNA leading us to describe it as a new genus Parafumarolamoeba. Copyright © 2015 Elsevier GmbH. All rights reserved.

  18. Primera cita de dos especies de insectos sobre el cultivo de maní (Arachis hypogaea L. en Córdoba, Argentina First report of two species of insects on peanut crop (Arachis hypogaea L. in Córdoba, Argentina

    Directory of Open Access Journals (Sweden)

    G.T. Boito

    2006-12-01

    Full Text Available La Argentina es uno de los principales exportadores de maní tipo confitería, cuya mayor área de producción se encuentra en la provincia de Córdoba. Entre los años 2002 y 2005 se realizaron monitoreos sobre el cultivo, en las localidades de Charras y General Deheza, situadas en dicha área, para determinar la presencia de insectos que pudieran ocasionarle algún daño. En esta comunicación se cita por primera vez a Anomala testaceipennis Blanchard (Coleoptera-Melolonthidae- Rutelinae-Anomalini y Caliothrips phaseoli Hood (Thysanoptera-Thripidae-Panchaetothripinae causando daño sobre maní (Arachis hypogaea L. en Córdoba, Argentina. Los estados inmaduros de Anomala testaceipennis se identificaron sobre la base de características morfológicas, principalmente la disposición de las setas en el extremo abdominal (raster, y los adultos de ambas especies fueron identificados mediante el uso de claves taxonómicas especializadas. Debido a la importancia de la calidad del producto que se comercializa (maní tipo confitería para exportación es relevante cuantificar el daño que estos insectos provocan y si ello incide económicamente en la producción del cultivo.Argentina is among the main exporters of peanut and the principal production area is located in Cordoba province. This crop was monitored between 2002 and 2005 years in Charras and General Deheza to detect potentially damaging insects. In this communication, Anomala testaceipennis Blanchard (Coleoptera-Melolonthidae- Rutelinae-Anomalini and Caliothrips phaseoli Hood (Thysanoptera-Thripidae- Panchaetothripinae are reported for the first time causing damage on peanut (Arachis hypogaea in Cordoba, Argentina. The immature stages of the A. testaceipennis were identified through its morphologic characteristics, mainly of the abdominal extreme (raster, and the adults of both species were identified through the use of specialized taxonomy keys. Due to the importance of the quality of the

  19. A key, based on wing patterns of biting midges (genus Culicoides Latreille - Diptera: Ceratopogonidae in the Iberian Peninsula, for use in epidemiological studies

    Directory of Open Access Journals (Sweden)

    Rawlings, Peter

    1996-12-01

    Full Text Available The identity of vectors of disease are often required speedily in epidemiological studies but with a precision which excludes as many other species as possible. Identification keys usually require the examination of many different parts of the suspected vector to pinpoint the species. This consumes considerable time and resources, so epidemiologists tend to ignore them. Asimplified approach to identification is proposed, using the characteristics of a single part of the body (the wings of biting midges of the genus Culicoides. The level of differentiation was epidemiologically valuable. The monoclave could not differentiate all the species from each other but more than one third (20/58 of identifications were for single species, and a further 12/58 identifications gave only two possibilities, making 55.2% of identifications to an accuracy of at most one of two species. The diagnosis of vector species was reached in a maximum of six decision points. The only notable exception to valuable differentiation was the four species in the Culicoides obsoletus group which had almost identical female wing patterns. The ready availability of simple keys, which can be used by anyone without formal training in taxonomy, for all the species of a group in a region should encourage greater standardisation of identifications in all studies, including those not primarily aimed at systematics. These monoclaves can also serve as the primary tools to build computerised image-recognition systems for genera, families and orders of insects.Con frequencia en los estudios epidemiológicos hace falta conocer con rapidez, pero también con precisión, la identidad de los vectores. Por lo general los procedimientos de identificación y las claves exigen el examen de un elevado número de partes diferentes del vector sospechoso. Este enfoque consume mucho tiempo y recursos por lo que tiende a ser evitado por los epidemiólogos. Se propone un sistema simplificado para la

  20. Genomic characterization of the Yersinia genus

    Science.gov (United States)

    2010-01-01

    Background New DNA sequencing technologies have enabled detailed comparative genomic analyses of entire genera of bacterial pathogens. Prior to this study, three species of the enterobacterial genus Yersinia that cause invasive human diseases (Yersinia pestis, Yersinia pseudotuberculosis, and Yersinia enterocolitica) had been sequenced. However, there were no genomic data on the Yersinia species with more limited virulence potential, frequently found in soil and water environments. Results We used high-throughput sequencing-by-synthesis instruments to obtain 25- to 42-fold average redundancy, whole-genome shotgun data from the type strains of eight species: Y. aldovae, Y. bercovieri, Y. frederiksenii, Y. kristensenii, Y. intermedia, Y. mollaretii, Y. rohdei, and Y. ruckeri. The deepest branching species in the genus, Y. ruckeri, causative agent of red mouth disease in fish, has the smallest genome (3.7 Mb), although it shares the same core set of approximately 2,500 genes as the other members of the species, whose genomes range in size from 4.3 to 4.8 Mb. Yersinia genomes had a similar global partition of protein functions, as measured by the distribution of Cluster of Orthologous Groups families. Genome to genome variation in islands with genes encoding functions such as ureases, hydrogeneases and B-12 cofactor metabolite reactions may reflect adaptations to colonizing specific host habitats. Conclusions Rapid high-quality draft sequencing was used successfully to compare pathogenic and non-pathogenic members of the Yersinia genus. This work underscores the importance of the acquisition of horizontally transferred genes in the evolution of Y. pestis and points to virulence determinants that have been gained and lost on multiple occasions in the history of the genus. PMID:20047673

  1. Revision of genus Steindachneridion (Siluriformes: Pimelodidae

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    Julio Cesar Garavello

    Full Text Available After several years collecting in the type-localities and studying representative samples of genus Steindachneridion Eigenmann & Eigenmann, 1919 from Brazilian and foreign museums, a taxonomic revision of the Recent species of the genus is presented, including the description of a new species from the rio Iguaçu, above the great falls. Steindachneridion species are large sized fishes, reaching 1000 mm total length or more, and sharing some anatomical characters that, at least tentatively, support the monophyly of the genus. In addition to the general features found in the Pimelodidae, the species S. amblyurum (Eigenmann & Eigenmann, 1888, S. parahybae (Steindachner, 1877, S. doceanum (Eigenmann & Eigenmann, 1889, S. scriptum (Miranda Ribeiro, 1918, S. punctatum (Miranda Ribeiro, 1918, and S. melanodermatum, new species, share the shape of the vomer tooth plates, six to eight branched rays in the dorsal-fin, and a low number of gill-rakers. All species, except fossil ones, are redescribed and a key for their identification is provided.

  2. The medicinal chemistry of genus Aralia.

    Science.gov (United States)

    Clement, Jason A; Clement, Ella S H

    2015-01-01

    The genus Aralia contains many plants used medicinally in Asia and the Americas. Although many members of this genus are used medicinally, the vast majority of this genus has not been explored chemically. The species of Aralia that have been explored chemically have yielded compounds of several classes, including triterpenoid saponins, sterols, diterpenoids, and acetylenic lipids. Many of the biologically active components found in genus Aralia have been evaluated for their potential as lead compounds for drug discovery. This review will explore the medicinal chemistry of compounds reported from genus Aralia, and future prospects for this genus will be considered.

  3. A review on phytochemistry and ethnopharmacological aspects of genus Calendula.

    Science.gov (United States)

    Arora, Disha; Rani, Anita; Sharma, Anupam

    2013-07-01

    This review includes 84 references on the genus Calendula (Asteraceae) and comprises ethnopharmacology, morphology and microscopy, phytoconstituents, pharmacological reports, clinical studies and toxicology of the prominent species of Calendula. Triterpene alcohols, triterpene saponins, flavonoids, carotenoids and polysaccharides constitute major classes of phytoconstituents of the genus. A few species of this genus have medicinal value, among these Calendula officinalis Linn., has been traditionally used in the treatment of various skin tumors, dermatological lesions, ulcers, swellings and nervous disorders as well as almost 200 cosmetic formulations, i.e., creams, lotions, shampoos. Despite a long tradition of use of some species, the genus has not been explored properly. In the concluding part, the future scope of Calendula species has been emphasized with a view to establish their multifarious biological activities and mode of action.

  4. Comparative Genomics Reveals High Genomic Diversity in the Genus Photobacterium

    DEFF Research Database (Denmark)

    Machado, Henrique; Gram, Lone

    2017-01-01

    Vibrionaceae is a large marine bacterial family, which can constitute up to 50% of the prokaryotic population in marine waters. Photobacterium is the second largest genus in the family and we used comparative genomics on 35 strains representing 16 of the 28 species described so far, to understand...... the genomic diversity present in the Photobacterium genus. Such understanding is important for ecophysiology studies of the genus. We used whole genome sequences to evaluate phylogenetic relationships using several analyses (16S rRNA, MLSA, fur, amino-acid usage, ANI), which allowed us to identify two...... misidentified strains. Genome analyses also revealed occurrence of higher and lower GC content clades, correlating with phylogenetic clusters. Pan-and core-genome analysis revealed the conservation of 25% of the genome throughout the genus, with a large and open pan-genome. The major source of genomic diversity...

  5. THE GENUS BURRETIODENDRON* Rehder (Tiliaceae

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    AJGH Kostermans

    2014-01-01

    Full Text Available Seven species of Burretwdendron are recognized, of which B. siamensis and B. yunnanensis are new to science. The distributional area of the genus covers Siam (one species, Yunnan (two species, Kweichow (one species;  Kwangsi (three species  and Tonkin (two species. B. tonkinensis is reduced to the synonymy of B. hsienmu. A key to the species is presented.

  6. Additions to the genus Acoridium

    NARCIS (Netherlands)

    Ames, Oakes

    1937-01-01

    The genus Acoridium is characterized by an extraordinary history. The original species, A. tenellum, a native of the Philippine Islands, was described at length from a fruiting specimen in 1843 by Nees von Esenbeck and referred to the Philydraceae. This treatment was prompted by the aspect of the pl

  7. Impact of climate change on oil fatty acid composition of peanut (Arachis hypogaea L. in three market classes Impacto del cambio climático en la composición de ácidos grasos del aceite de maní (Arachis hypogaea L. de tres clases comerciales

    Directory of Open Access Journals (Sweden)

    Fadul Onemli

    2012-12-01

    Full Text Available Peanut (Arachis hypogaea L. is one of the most important oilseed crops of the world. The fatty acid composition plays an important role in oil quality. Experiments were performed to examine the variation in oil fatty acids of three normal oleic peanut market types (Virginia, Valencia, and Spanish in 2008, 2009, and 2010. Variations of botanical variety, year and their interaction were highly significant for oil content and all 13 fatty acids studied. Oil content in different peanut market types exhibited significant differences. The maximum oil content (51.993% was found in Virginia (NC-7, while Valencia (New Mexico Valencia A accumulated the minimum oil content (47.197%. Virginia had also the highest oleic acid percentage. Higher temperatures during seed development in 2010 resulted in greater oleic contents than 2008 and 2009 while lower temperatures post anthesis in 2009 caused higher linoleic acid. It was observed different effects of years in oil fatty acid composition according to peanut types. The highest percentages of linoleic acid for Virginia, Valencia, and Spanish were observed in 2010, 2008, and 2009, respectively. The highest negative correlation was noted for oleic and linoleic acids (r: -0.985. Oleic acid was also correlated negatively with arachidic and behenic acids.El maní (Arachis hypogaea L. es uno de los cultivos oleaginosos más importantes del mundo. La composición de los ácidos grasos juega un rol importante en la calidad del aceite. Los experimentos se llevaron a cabo en los anos 2008, 2009, y 2010, para determinar la variación en la composición de ácidos grasos de tres clases comerciales de maní (Virginia, Valencia y Spanish con contenido normal de ácido oleico. La variación entre variedades botánicas, ano, y su interacción fueron altamente significativas para el contenido de aceite y los 13 ácidos grasos estudiados. El contenido de aceite en las diferentes clases comerciales exhibió marcadas diferencias

  8. Gamma radiation effects at color, antioxidant capacity and fatty acid profile in peanut (Arachis hypogaea L.); Efeitos da radiacao gama na cor, capacidade antioxidante e perfil de acidos graxos em amendoim (Arachis hypogaea L.)

    Energy Technology Data Exchange (ETDEWEB)

    Camargo, Adriano Costa de; Canniatti-Brazaca, Solange Guidolin; Mansi, Debora Niero; Domingues, Maria Antonia Calori [Escola Superior de Agricultura Luiz de Queiroz (ESALQ/USP), Piracicaba, SP (Brazil). Dept. de Agroindustria, Alimentos e Nutricao; Arthur, Valter, E-mail: arthur@cena.usp.b [Centro de Energia Nuclear na Agricultura (CENA/USP), Piracicaba, SP (Brazil)

    2011-01-15

    Irradiation is efficient at extinction fungi contamination in peanuts. Peanuts have high biologic value protein, minerals, vitamin E, complex B, and high concentration of lipids. The objective of this research is to evaluate the gamma irradiation effect on color, total phenolic, antioxidant activity, and fatty acid profile in peanuts (Arachis hypogaea L.). Cultivars IAC-Tatu ST and IAC-Runner 886 were submitted to gamma radiation with doses of 5.0; 7.5; 10.0, and 15.0 kGy and storage at room temperature. There was no significant difference in the color of IAC-Tatu ST. However, significant difference was found in the luminosity and Chroma in IAC-Runner 886. Total fenolics differed from the control with 33.27 mg.g{sup -1} and treatment dose of 10.0 kGy with 58.60 mg.g{sup -1} in IAC-Tatu ST. This parameter not had significant difference in IAC-Runner 886 and the control with 51.59 mg.g{sup -1}. The antioxidant activity did not present significant difference with a dose of 10.0 kGy, recommended for the elimination of fungi in peanuts. The dose of 10.0 kGy showed a decrease in saturated fatty acids, increase in unsaturated fatty acids, and an increase in linolleic acid. The oleic/linoleic relation decreased justifying further research correlating storage and oxidative stability. (author)

  9. Study of the genus Cephennium Müler & Kunze, 1822 (Coleoptera, Staphylinidae, Scydmaeninae) from the Balkan Peninsula. Part II. New species of the subgenus Cephennium s. str.

    Science.gov (United States)

    Stevanović, Miroslav

    2014-07-18

    Twelve new species of the genus Cephennium Müler & Kunze, 1822 are described: C. (s. str.) irenae sp. n. (from Serbia, Bosnia and Herzegovina, and Montenegro); C. (s. str.) sladjanae sp. n. and C. (s. str.) fallax sp. n. (both from Serbia and Bulgaria); C. (s. str.) viti sp. n. (from Serbia, Macedonia, Greece and Bulgaria); C. (s. str.) fairchildi sp. n., C. (s. str.) ivanjicense sp. n., C. (s. str.) serbicum sp. n. and C. (s. str.) remisianum sp. n. (all from Serbia); C. (s. str.) assingi sp. n. and C. (s. str.) angelinii sp. n. (both from Greece); C. (s. str.) mlejneki sp. n. (from Montenegro) and C. (s. str.) vitoshae sp. n. (from Bulgaria). Aedeagi and male protibiae of all species are illustrated. Cephennium (s. str.) bosnicum Ganglbauer, 1899 is redescribed and its lectotype is designated.

  10. Genus identification of toxic plant by real-time PCR.

    Science.gov (United States)

    Matsuyama, Shuji; Nishi, Katsuji

    2011-03-01

    Some plants have toxicities that are dangerous for humans. In the case of poisoning by toxic plants, a rapid and easy screening test is required for accurate medical treatment or forensic investigation. In this study, we designed specific primer pairs for identification of toxic plants, such as subgenus Aconitum, genus Ricinus, genus Illicium, and genus Scopolia, by internal transcribed spacer sequences of nuclear ribosomal DNA. Allied species of target plants, foods, and human DNA were not detected, but each primer pair provided a specific PCR product from the target plant using real-time PCR. This method can detect the subgenus Aconitum, genus Ricinus, and genus Scopolia with template DNA of 10 pg, respectively, and genus Illicium with 1 pg. Furthermore, each primer pair provided the exact PCR product from digested target plants in artificial gastric fluid. When a trace unknown plant sample in forensic investigation is collected from stomach contents, this PCR assay may be useful for screening toxic plants.

  11. Structure and nutritive value of Coastcross -1 and “Arachis pintoi” mixed pasture, with or without nitrogen fertilization Estrutura e valor nutritivo da pastagem de Coastcross -1 consorciada com "Arachis pintoi", com e sem adubação nitrogenada

    Directory of Open Access Journals (Sweden)

    Veridiana Aparecida Limão

    2009-09-01

    Full Text Available This trial was carried out to evaluate the production and quality of leaf blade (LB, sheath + green stem (SGS, dead material (DE forage structural constituents of Coastcross and Arachis pintoi whole plant (WPA mixed pasture, under grazing, during February 2003 and June 2004. The treatments CA0 = Coastcross + Arachis without N; CA100 = Coastcross + Arachis with 100 kg of N; CA200 = Coastcross + Arachis with 200 kg of N and C200 = Coastcross with 200 kg of N were distributed in a randomly block design, with two replicates. Pasture management was done through continuous grazing with variable stocking rate. Analyses of crude protein (CP, neutral detergent fiber (NDF and dry matter in vitro digestibility (DMIVD were done to LB, SGS, and WPA. The production of structural constituents varied in agreement with total mass and forage. Coastcross SGS contributed for forage production, and the quality characteristics are acceptable for animal production. Treatments that received nitrogen presented the highest CP values, and similar NDF and DMIVD to treatments without nitrogen.Objetivou-se, com este trabalho, avaliar a produção e composição química de forragem nos constituintes estruturais lâmina foliar (LF, bainha + colmo verde (BCV, material morto (MM da Coastcross e da planta inteira de Arachis pintoi (AP em consorciação sob pastejo no período de julho de 2003 a junho de 2004. Os tratamentos CA0=Coastcross + Arachis sem N; CA100=Coastcross + Arachis com 100 kg de N/ha/ano; CA200=Coastcross + Arachis com 200 kg de N/ha/ano e C200=Coastcross com 200 kg de N/ha/ano foram distribuídos em um delineamento em blocos ao acaso, com duas repetições. O manejo do pasto foi por meio de lotação contínua e carga animal variável. Foram realizadas as análises de proteína bruta (PB, fibra em detergente neutro (FDN e digestibilidade in vitro da matéria seca (DIVMS da pastagem para LF, BCV e AP. As produções dos constituintes estruturais variaram de

  12. Symbiotic diversity in the cosmopolitan genus Acacia

    Science.gov (United States)

    James K. Leary; Paul W. Singleton; Paul G. Scowcroft; Dulal Borthakur

    2006-01-01

    Acacia is the second largest genus within the Leguminosae, with 1352 species identified. This genus is now known to be polyphyletic and the international scientific community will presumably split Acacia into five new genera. This review examines the diversity of biological nitrogen fixation symbiosis within Acacia as a single genus. Due to its global importance, an...

  13. Rank and genus of 3-manifolds

    CERN Document Server

    Li, Tao

    2011-01-01

    We construct a counterexample to the Rank versus Genus Conjecture, i.e. a closed orientable hyperbolic 3-manifold with rank of its fundamental group smaller than its Heegaard genus. Moreover, we show that the discrepancy between rank and Heegaard genus can be arbitrarily large for hyperbolic 3-manifolds. We also construct toroidal such examples containing hyperbolic JSJ pieces.

  14. The genus Stixis (Capparaceae). A census

    NARCIS (Netherlands)

    Jacobs, M.

    1963-01-01

    For a long time, the genus Stixis has been known in the Indian Floras under the name Roydsia, until Pierre monographed it in 1887. Several of Pierre’s species have in the present paper been reduced, leaving Stixis a genus comprising 7 species and 1 subspecies. The genus, which is very uniform, exten

  15. The genus Yersinia

    Energy Technology Data Exchange (ETDEWEB)

    Prpic, J.K.; Davey, R.B.

    1987-01-01

    This book contains papers presented at the Fourth International symposium on Yersinia. The topics covered include: Cloning and use of Vwa plasmid DNA as gene probes for virulent Yersiniae; Studies on the role of virulence determinants of Yersinia enterocolitica in gnotobiotic piglets; and significance of specific IgA antibodies in infections due to Yersinia enterocolitica and their complications.

  16. Gas chromatography-mass spectrometry screening for phytochemical 4-desmethylsterols accumulated during development of Tunisian peanut kernels (Arachis hypogaea L.).

    Science.gov (United States)

    Cherif, Aicha O; Trabelsi, Hajer; Ben Messaouda, Mhamed; Kâabi, Belhassen; Pellerin, Isabelle; Boukhchina, Sadok; Kallel, Habib; Pepe, Claude

    2010-08-11

    4-Desmethylsterols, the main component of the phytosterol fraction, have been analyzed during the development of Tunisian peanut kernels ( Arachis hypogaea L.), Trabelsia (AraT) and Chounfakhi (AraC), which are monocultivar species, and Arbi (AraA), which is a wild species, by gas chromatography-mass spectrometry. Immature wild peanut (AraA) showed the highest contents of beta-sitosterol (554.8 mg/100 g of oil), campesterol (228.6 mg/100 g of oil), and Delta(5)-avenasterol (39.0 mg/100 g of oil) followed by peanut cultivar AraC with beta-sitosterol, campesterol, and Delta(5)-avenasterol averages of 267.7, 92.1, and 28.6 mg/100 g of oil, respectively, and similarly for AraT 309.1, 108.4, and 27.4 mg/100 g of oil, respectively, were found. These results suggest that, in immature stages, phytosterol contents can be important regulator factors for the functional quality of peanut oil for the agro-industry chain from plant to nutraceuticals.

  17. Current situation and perspective of the multi-use of Arachis pintoi in agro-ecosystems devoted to animal production

    Directory of Open Access Journals (Sweden)

    Verónica Andrade Yucailla

    2016-07-01

    Full Text Available This paper realized an analysis of the scientific literature in which 75 articles were reviewed from indexed Journals in specialized databases and of international recognition about the main aspects reviewed such as the origin, adaptation conditions in areas of the humid tropic, genetic aspects related to the chromosomal markers; demonstrating a big morphologic variability in the germplasms. Inside of the potential uses of major relevancy there was stand out the use as soil coverage and as soil improver, as well as weeds controller, presenting a positive effect in the content of organic matter and nitrogen of soil. The use of Arachis pintoi Frapovickas y Gregory in the animal feeding systems is a resource of high quality; it can be a viable alternative for the animal production systems in the tropic. The impact of some agroecological practices on the agroproductive parameters with the use of A. pintoi is of the important relevancy. It was concludes that A. pintoi presents a potential of multiple use in integrated systems of crops - trees – livestock, constituting an alternative of sustainable management of the tropical animal production.

  18. Influence of cadmium on the symbiotic interaction established between peanut (Arachis hypogaea L.) and sensitive or tolerant bradyrhizobial strains.

    Science.gov (United States)

    Bianucci, Eliana; Furlan, Ana; Rivadeneira, Jesica; Sobrino-Plata, Juan; Carpena-Ruiz, Ramón O; Tordable, María del Carmen; Fabra, Adriana; Hernández, Luis E; Castro, Stella

    2013-11-30

    Heavy metals in soil are known to affect rhizobia-legume interaction reducing not only rhizobia viability, but also nitrogen fixation. In this work, we have compared the response of the symbiotic interaction established between the peanut (Arachis hypogaea L.) and a sensitive (Bradyrhizobium sp. SEMIA6144) or a tolerant (Bradyrhizobium sp. NLH25) strain to Cd under exposure to this metal. The addition of 10 μM Cd reduced nodulation and nitrogen content in both symbiotic associations, being the interaction established with the sensitive strain more affected than that with the tolerant one. Plants inoculated with the sensitive strain accumulated more Cd than those inoculated with the tolerant strain. Nodules showed an increase in reactive oxygen species (ROS) production when exposed to Cd. The histological structure of the nodules exposed to Cd revealed a deposit of unknown material on the cortex and a significant reduction in the infection zone diameter in both strains, and a greater number of uninfected cells in those nodules occupied by the sensitive strain. In conclusion, Cd negatively impacts on peanut-bradyrhizobia interaction, irrespective of the tolerance of the strains to this metal. However, the inoculation of peanut with Bradyrhizobium sp. NLH25 results in a better symbiotic interaction suggesting that the tolerance observed in this strain could limit Cd accumulation by the plant. Copyright © 2013 Elsevier Ltd. All rights reserved.

  19. Detection of S-nitrosothiol and nitrosylated proteins in Arachis hypogaea functional nodule: response of the nitrogen fixing symbiont.

    Science.gov (United States)

    Maiti, Debasis; Sarkar, Tuhin Subhra; Ghosh, Sanjay

    2012-01-01

    To detect the presence of NO, ROS and RNS in nodules of crack entry legumes, we used Arachis hypogaea functional nodule. The response of two cognate partner rhizobia was compared towards NO and GSNO using S. meliloti and Bradyrhizobium sp NC921001. ROS, NO, nitrosothiol and bacteroids were detected by fluorescence microscopy. Redox enzymes and thiol pools were detected biochemically. Nitrosothiols were found to be present but ROS and NO were absent in A. hypogaea nodule. A number of S-nitrosylated proteins were also detected. The total thiol pool and most of the redox enzymes were low in nodule cytosolic extract but these were found to be high in the partner microorganisms indicating partner rhizobia could protect the nodule environment against the nitrosothiols. Both S. meliloti and Bradyrhizobium sp NC921001 were found to contain GSNO reductase. Interestingly, there was a marked difference in growth pattern between S. meliloti and Bradyrhizobium sp in presence of sodium nitroprusside (SNP) and S-nitrosoglutathione (GSNO). Bradyrhizobium sp was found to be much more tolerant to NO donor compounds than the S. meliloti. In contrast, S. meliloti showed resistance to GSNO but was sensitive to SNP. Together our data indicate that nodule environment of crack entry legumes is different than the nodules of infection mode entry in terms of NO, ROS and RNS. Based on our biochemical characterization, we propose that exchange of redox molecules and reactive chemical species is possible between the bacteroid and nodule compartment.

  20. Detection of S-nitrosothiol and nitrosylated proteins in Arachis hypogaea functional nodule: response of the nitrogen fixing symbiont.

    Directory of Open Access Journals (Sweden)

    Debasis Maiti

    Full Text Available To detect the presence of NO, ROS and RNS in nodules of crack entry legumes, we used Arachis hypogaea functional nodule. The response of two cognate partner rhizobia was compared towards NO and GSNO using S. meliloti and Bradyrhizobium sp NC921001. ROS, NO, nitrosothiol and bacteroids were detected by fluorescence microscopy. Redox enzymes and thiol pools were detected biochemically. Nitrosothiols were found to be present but ROS and NO were absent in A. hypogaea nodule. A number of S-nitrosylated proteins were also detected. The total thiol pool and most of the redox enzymes were low in nodule cytosolic extract but these were found to be high in the partner microorganisms indicating partner rhizobia could protect the nodule environment against the nitrosothiols. Both S. meliloti and Bradyrhizobium sp NC921001 were found to contain GSNO reductase. Interestingly, there was a marked difference in growth pattern between S. meliloti and Bradyrhizobium sp in presence of sodium nitroprusside (SNP and S-nitrosoglutathione (GSNO. Bradyrhizobium sp was found to be much more tolerant to NO donor compounds than the S. meliloti. In contrast, S. meliloti showed resistance to GSNO but was sensitive to SNP. Together our data indicate that nodule environment of crack entry legumes is different than the nodules of infection mode entry in terms of NO, ROS and RNS. Based on our biochemical characterization, we propose that exchange of redox molecules and reactive chemical species is possible between the bacteroid and nodule compartment.

  1. Estabilidad del Rendimiento en Semilla de 11 Genotipos de Maní (Arachis Hypogaea l. en Santa Fe de Antioquia

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    Escobar Soto Carlos

    1997-06-01

    Full Text Available Dese 1983 se vienen realizando investigaciones sobre el comportamiento agronómico del maní (Arachis hypogaea L. en el Centro Agropecuario Cotové, propiedad de la Facultad de Ciencias Agropecuarias de la Universidad Nacional de Colombia, Sede Medellín, ubicado en la zona de vida de bosque seco tropical (bs-T. Este trabajo se planeó con el objetivo de estudiar la estabilidad del rendimiento en semilla de 11 genotipos identificados como promisorios para esa zona. Estos genotipos se sembraron durante seis épocas dijeren/es y se registró el rendimiento de maní en semilla. En cada época los genotipos se dispusieron de acuerdo con el diseño de bloques completos al azar Para el estudio de la estabilidad del rendimiento se empleó el modelo propuesto por Eberhart y Russell. De acuerdo con los resultados obtenidos se encontró que el genotipo Tatuí 76 SM1CA es el que reúne las condiciones tanto de estabilidad como de calidad de semilla para ser sembrado en dicho Centro.

  2. In vitro amoebicidal activity of ethanol extracts of Arachis hypogaea L., Curcuma longa L. and Pancratium maritimum L. on Acanthamoeba castellanii cysts.

    Science.gov (United States)

    El-Sayed, Nagwa Mostafa; Ismail, Khadiga Ahmed; Ahmed, Sabah Abd-El-Ghany; Hetta, Mona Hafez

    2012-05-01

    Acanthamoeba castellanii causes amoebic keratitis which is a painful sight-threatening disease of the eyes. Its eradication is difficult because the amoebas encyst making it highly resistant to anti-amoebic drugs, but several medicinal plants have proven to be more effective than the usual therapy. This study aimed to evaluate the in vitro amoebicidal activity of ethanol extracts of Arachis hypogaea L. (peanut), Curcuma longa L. (turmeric), and Pancratium maritimum L. (sea daffodil) on A. castellanii cysts. Acanthamoeba were isolated from keratitic patients, cultivated on 1.5% non-nutrient agar, and then incubated with different concentrations of plant extracts which were further evaluated for their cysticidal activity. The results showed that all extracts had significant inhibitory effect on the multiplication of Acanthamoeba cysts as compared to the drug control (chlorhexidine) and non-treated control, and the inhibition was time and dose dependent. The ethanol extract of A. hypogaea had a remarkable cysticidal effect with minimal inhibitory concentration (MIC) of 100 mg/ml in all incubation periods, while the concentrations of 10 and 1 mg/ml were able to completely inhibit growth after 48 and 72 h, respectively. The concentrations 0.1 and 0.01 mg/ml failed to completely inhibit the cyst growth, but showed growth reduction by 64.4-82.6% in all incubation periods. C. longa had a MIC of 1 g and 100 mg/ml after 48 and 72 h, respectively, while the concentrations 10, 1, and 0.1 mg/ml caused growth reduction by 60-90.3% in all incubation periods. P. maritimum had a MIC of 200 mg/ml after 72 h, while the 20-, 2-, 0.2-, and 0.02-mg/ml concentrations showed growth reduction by 34-94.3% in all incubation periods. All extracts seemed to be more effective than chlorhexidine which caused only growth reduction by 55.3-80.2% in all incubation periods and failed to completely inhibit the cyst growth. In conclusion, ethanol extracts of A. hypogaea, C. longa, and P. maritimum

  3. The genus Phytophthora anno 2012.

    Science.gov (United States)

    Kroon, Laurens P N M; Brouwer, Henk; de Cock, Arthur W A M; Govers, Francine

    2012-04-01

    Plant diseases caused by Phytophthora species will remain an ever increasing threat to agriculture and natural ecosystems. Phytophthora literally means plant destroyer, a name coined in the 19th century by Anton de Bary when he investigated the potato disease that set the stage for the Great Irish Famine. Phytophthora infestans, the causal agent of potato late blight, was the first species in a genus that at present has over 100 recognized members. In the last decade, the number of recognized Phytophthora species has nearly doubled and new species are added almost on a monthly basis. Here we present an overview of the 10 clades that are currently distinguished within the genus Phytophthora with special emphasis on new species that have been described since 1996 when Erwin and Ribeiro published the valuable monograph 'Phytophthora diseases worldwide' (35).

  4. Maximum Genus of Strong Embeddings

    Institute of Scientific and Technical Information of China (English)

    Er-ling Wei; Yan-pei Liu; Han Ren

    2003-01-01

    The strong embedding conjecture states that any 2-connected graph has a strong embedding on some surface. It implies the circuit double cover conjecture: Any 2-connected graph has a circuit double cover.Conversely, it is not true. But for a 3-regular graph, the two conjectures are equivalent. In this paper, a characterization of graphs having a strong embedding with exactly 3 faces, which is the strong embedding of maximum genus, is given. In addition, some graphs with the property are provided. More generally, an upper bound of the maximum genus of strong embeddings of a graph is presented too. Lastly, it is shown that the interpolation theorem is true to planar Halin graph.

  5. THE HYPHOMYCETE GENUS DACTYLARIA SACC.

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    MIEN A. RIFAI

    2015-11-01

    Full Text Available An emended delimitation of the genus Dactylaria Sacc. is proposed andthe two accepted species, which are non-predaceous and dematiaceous,are redescribed and illustrated. The affinity of many nematode-trappingspecies currently classified in Dactylaria with the didymosporous generaArthrobotrys Corda, Candelabrella Rifai & R. C. Cooke and Genicularia,Rifai & R. C. Cooke is discussed and the scopes of the latter genera areenlarged, and consequently several new combinations are made.

  6. An investigation of self-incompatibility within the genus Restrepia.

    Science.gov (United States)

    Millner, Helen J; McCrea, Alison R; Baldwin, Timothy C

    2015-03-01

    • The genus Restrepia (Orchidaceae) is indigenous to montane rain forests of Central and South America. Recently, as habitat has fragmented and wild populations dwindled, the chances for successful cross-pollination within the genus have been reduced. Since cultivated species of Restrepia have been vegetatively propagated, they remain genetically close to those in the wild, making ex situ collections of the genus useful model populations for investigating breeding systems. Restrepia are found in clade B of the Pleurothallidinae, the only clade in which self-incompatibility (SI) has not yet been confirmed. In the current study, private collections of Restrepia were used to study the operation of SI within the genus to assist future ex situ conservation of this and related genera.• A variety of self-pollination, intraspecific, and interspecific crosses were performed across the genus, and pollen tube growth was studied.• Individual species exhibited varying degrees of SI. Self-pollinations performed across 26 species in the genus produced few viable seeds, with the exception of R. aberrans. Viable "filled" seeds with embryos were shown to require an intraspecific cross. Primary hybrids between species produced >90% seeds with embryos that germinated well.• The type of SI operating within the genus was considered to be best explained by gametophytic self-incompatibility (GSI) with interspecific variation in its phenotypic expression. The implications of these findings are discussed in relation to SI in the Pleurothallidinae and conservation strategies for Restrepia and related genera. © 2015 Botanical Society of America, Inc.

  7. On the concordance genus of topologically slice knots

    OpenAIRE

    Hom, Jennifer

    2012-01-01

    The concordance genus of a knot K is the minimum Seifert genus of all knots smoothly concordant to K. Concordance genus is bounded below by the 4-ball genus and above by the Seifert genus. We give a lower bound for the concordance genus of K coming from the knot Floer complex of K. As an application, we prove that there are topologically slice knots with 4-ball genus equal to one and arbitrarily large concordance genus.

  8. A review of the genus Curtisia (Curtisiaceae

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    E. YU Yembaturova

    2009-12-01

    Full Text Available A review of the monotypic southern African endemic genus Curtisia Aiton is presented. Detailed studies of the fruit and seed structure provided new evidence in support of a close relationship between the family Curtisiaceae and Comaceae. Comparisons with several other members of the Comales revealed carpological similarities to certain species of Comus s.I., sometimes treated as segregate genera Dendrobenthamia Hutch, and Benthamidia Spach. We also provide information on the history of the assegai tree, Curtisia dentata (Burm.f. C.A.Sm. and its uses, as well as a formal taxonomic revision, including nomenclature, typification, detailed description and geographical distribution.

  9. The genus Bryoerythrophyllum (Musci, Pottiaceae in Antarctica

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    Sollman Philip

    2015-07-01

    Full Text Available Antarctic material of the genus Bryoerythrophyllum P. C. Chen was studied from all specimens present in KRAM. Bryoerythrophyllum recurvirostrum (Hedw. P. C. Chen var. antarcticum L. I. Savicz & Smirnova is treated as a distinct species: B. antarcticum (L. I. Savicz & Smirnova P. Sollman, stat. nov. Three species are now known in the Antarctic region: B. antarcticum, B. recurvirostrum and B. rubrum (Jur. ex Geh. P. C. Chen. Bryoerythrophyllum rubrum is reported for the first time from the Antarctic. It is a bipolar species. A key to the taxa is given. These species are described and briefly discussed, with notes on illustrations, reproduction, habitat, world range, distribution and elevation in Antarctica.

  10. A review of the genus Curtisia (Curtisiaceae

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    E. YU Yembaturova

    2009-12-01

    Full Text Available A review of the monotypic southern African endemic genus Curtisia Aiton is presented. Detailed studies of the fruit and seed structure provided new evidence in support of a close relationship between the family Curtisiaceae and Comaceae. Comparisons with several other members of the Comales revealed carpological similarities to certain species of Comus s.I., sometimes treated as segregate genera Dendrobenthamia Hutch, and Benthamidia Spach. We also provide information on the history of the assegai tree, Curtisia dentata (Burm.f. C.A.Sm. and its uses, as well as a formal taxonomic revision, including nomenclature, typification, detailed description and geographical distribution.

  11. A proposed genus boundary for the prokaryotes based on genomic insights.

    Science.gov (United States)

    Qin, Qi-Long; Xie, Bin-Bin; Zhang, Xi-Ying; Chen, Xiu-Lan; Zhou, Bai-Cheng; Zhou, Jizhong; Oren, Aharon; Zhang, Yu-Zhong

    2014-06-01

    Genomic information has already been applied to prokaryotic species definition and classification. However, the contribution of the genome sequence to prokaryotic genus delimitation has been less studied. To gain insights into genus definition for the prokaryotes, we attempted to reveal the genus-level genomic differences in the current prokaryotic classification system and to delineate the boundary of a genus on the basis of genomic information. The average nucleotide sequence identity between two genomes can be used for prokaryotic species delineation, but it is not suitable for genus demarcation. We used the percentage of conserved proteins (POCP) between two strains to estimate their evolutionary and phenotypic distance. A comprehensive genomic survey indicated that the POCP can serve as a robust genomic index for establishing the genus boundary for prokaryotic groups. Basically, two species belonging to the same genus would share at least half of their proteins. In a specific lineage, the genus and family/order ranks showed slight or no overlap in terms of POCP values. A prokaryotic genus can be defined as a group of species with all pairwise POCP values higher than 50%. Integration of whole-genome data into the current taxonomy system can provide comprehensive information for prokaryotic genus definition and delimitation. Copyright © 2014, American Society for Microbiology. All Rights Reserved.

  12. Ancient Mitochondrial Capture as Factor Promoting Mitonuclear Discordance in Freshwater Fishes: A Case Study in the Genus Squalius (Actinopterygii, Cyprinidae) in Greece

    Science.gov (United States)

    Vukić, Jasna; Šanda, Radek; Doadrio, Ignacio

    2016-01-01

    Hybridization and incomplete lineage sorting are common confounding factors in phylogeny and speciation resulting in mitonuclear disparity. Mitochondrial introgression, a particular case of hybridization, may, in extreme cases, lead to replacement of the mitochondrial genome of one species with that of another (mitochondrial capture). We investigated mitochondrial introgression involving two species of the cyprinid genus Squalius in the western Peloponnese region of Greece using molecular and morphological data. We found evidence of complete mitochondrial introgression of Squalius keadicus into two populations recognized as Squalius peloponensis from the Miras and Pamissos River basins and a divergence of mitochondrial genomes of S. keadicus from the Evrotas basin from that of the introgressed populations dating from the Pleistocene. Secondary contact among basins is a possible factor in connection of the species and the introgression event. Morphological analyses support the hypothesis of mitochondrial introgression, as S. keadicus was different from the other three populations recognized as S. peloponensis, although significant differences were found among the four populations. Isolation by geographical barriers arose during Pleistocene in the western Peloponnese were the source of the evolution of the two reciprocally monophyletic subclades found in the S. keadicus mitochondrial clade, and the morphological differences found among the four populations. Along with the lack of structure in the nuclear genome in the three populations ascribed to S. peloponensis, this suggests an incipient speciation process occurring in these Squalius species in the western Peloponnese. PMID:27906993

  13. Genus paracoccidioides: Species recognition and biogeographic aspects.

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    Raquel Cordeiro Theodoro

    Full Text Available BACKGROUND: Paracoccidioidomycosis is a systemic mycosis caused by Paracoccidioides brasiliensis (species S1, PS2, PS3, and Paracoccidioides lutzii. This work aimed to differentiate species within the genus Paracoccidioides, without applying multilocus sequencing, as well as to obtain knowledge of the possible speciation processes. METHODOLOGY/PRINCIPAL FINDINGS: Single nucleotide polymorphism analysis on GP43, ARF and PRP8 intein genes successfully distinguished isolates into four different species. Morphological evaluation indicated that elongated conidia were observed exclusively in P. lutzii isolates, while all other species (S1, PS2 and PS3 were indistinguishable. To evaluate the biogeographic events that led to the current geographic distribution of Paracoccidioides species and their sister species, Nested Clade and Likelihood Analysis of Geographic Range Evolution (LAGRANGE analyses were applied. The radiation of Paracoccidioides started in northwest South America, around 11-32 million years ago, as calculated on the basis of ARF substitution rate, in the BEAST program. Vicariance was responsible for the divergence among S1, PS2 and P. lutzii and a recent dispersal generated the PS3 species, restricted to Colombia. Taking into account the ancestral areas revealed by the LAGRANGE analysis and the major geographic distribution of L. loboi in the Amazon basin, a region strongly affected by the Andes uplift and marine incursions in the Cenozoic era, we also speculate about the effect of these geological events on the vicariance between Paracoccidioides and L. loboi. CONCLUSIONS/SIGNIFICANCE: The use of at least 3 SNPs, but not morphological criteria, as markers allows us to distinguish among the four cryptic species of the genus Paracoccidioides. The work also presents a biogeographic study speculating on how these species might have diverged in South America, thus contributing to elucidating evolutionary aspects of the genus Paracoccidioides.

  14. Genomic characterization of the Taylorella genus.

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    Laurent Hébert

    Full Text Available The Taylorella genus comprises two species: Taylorella equigenitalis, which causes contagious equine metritis, and Taylorella asinigenitalis, a closely-related species mainly found in donkeys. We herein report on the first genome sequence of T. asinigenitalis, analyzing and comparing it with the recently-sequenced T. equigenitalis genome. The T. asinigenitalis genome contains a single circular chromosome of 1,638,559 bp with a 38.3% GC content and 1,534 coding sequences (CDS. While 212 CDSs were T. asinigenitalis-specific, 1,322 had orthologs in T. equigenitalis. Two hundred and thirty-four T. equigenitalis CDSs had no orthologs in T. asinigenitalis. Analysis of the basic nutrition metabolism of both Taylorella species showed that malate, glutamate and alpha-ketoglutarate may be their main carbon and energy sources. For both species, we identified four different secretion systems and several proteins potentially involved in binding and colonization of host cells, suggesting a strong potential for interaction with their host. T. equigenitalis seems better-equipped than T. asinigenitalis in terms of virulence since we identified numerous proteins potentially involved in pathogenicity, including hemagluttinin-related proteins, a type IV secretion system, TonB-dependent lactoferrin and transferrin receptors, and YadA and Hep_Hag domains containing proteins. This is the first molecular characterization of Taylorella genus members, and the first molecular identification of factors potentially involved in T. asinigenitalis and T. equigenitalis pathogenicity and host colonization. This study facilitates a genetic understanding of growth phenotypes, animal host preference and pathogenic capacity, paving the way for future functional investigations into this largely unknown genus.

  15. Plasmodium Genus Assay Transition to the Joint Biological Agent Identification and Diagnostic System (JBAIDS)

    Science.gov (United States)

    2012-07-12

    AFRIMS), Bangkok, Thailand Final Report AFMSA O&M FY09 Project (FWH20090036H): Plasmodium Genus Assay Transition to the Joint Biological Agent...evaluation data to support AFPMB approval of the RAPID- based Plasmodium genus assay for use in vector/vector-borne disease surveillance on the RAPID...Objective 1 Results: Plasmodium genus RAPID/JBAIDS assay development activities conducted during the FY09 study did not resolve cross-reactivity

  16. Aggressive behavior in the genus Gallus sp

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    SA Queiroz

    2006-03-01

    Full Text Available The intensification of the production system in the poultry industry and the vertical integration of the poultry agribusiness have brought profound changes in the physical and social environment of domestic fowls in comparison to their ancestors and have modified the expression of aggression and submission. The present review has covered the studies focusing on the different aspects linked to aggressiveness in the genus Gallus. The evaluated studies have shown that aggressiveness and subordination are complex behavioral expressions that involve genetic differences between breeds, strains and individuals, and differences in the cerebral development during growth, in the hormonal metabolism, in the rearing conditions of individuals, including feed restriction, density, housing type (litter or cage, influence of the opposite sex during the growth period, existence of hostile stimuli (pain and frustration, ability to recognize individuals and social learning. The utilization of fighting birds as experimental material in the study of mechanisms that have influence on the manifestation of aggressiveness in the genus Gallus might comparatively help to elucidate important biological aspects of such behavior.

  17. Genetic variability assessment in the genus Passiflora by SSR markers

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    Claudia Lougon Paiva

    2014-09-01

    Full Text Available The genus Passiflora encompasses many species that are endemic to the Brazilian territory, including some with economic value. Studies on genetic diversity in this genus are fundamental because they allow understanding genetic variability and distance. The present study aimed to determine the genetic variability and distances among 10 species of the genus Passiflora by using microsatellite markers (Simple Sequence Repeat, SSR. Twenty-eight heterologous microsatellite markers were tested, but only 12 were used in the diversity analysis because they amplified in at least 80% of the species. A clear separation was observed among the subgenuses studied, as well as wide variation among the accessions of Passiflora. This knowledge enables breeders to explore diversity and transfer favorable alleles found in wild species.

  18. Two new species of Acervus (Pezizales) with a key to species of the genus.

    Science.gov (United States)

    Zhuang, Wen-Ying; Luo, Jing; Zhao, Peng

    2011-01-01

    Studies on the genus Acervus from China are reviewed briefly. Six of the seven known species of the genus are currently recorded in this country. Acervus beijingense and A. changchunense are described as new based on morphological features and molecular data, and A. flavidus with minor emendation is added to the Chinese fungus flora. Phylogenetic relationships among four of the seven species of the genus are investigated based on the 28S rDNA sequence analysis. Species of the genus formed a single clade with high bootstrap support. The sequences of A. epispartius forma epispartius and that of A. flavidus obtained from materials in different geographical regions together formed a group with 100% bootstrap support. Ascospore size and shape are important criteria in the taxonomy of the genus and are phylogenetically informative. A dichotomous key to all described species of the genus is provided.

  19. Genotyping of clinical isolates of Acanthamoeba genus in Venezuela.

    Science.gov (United States)

    Wagner, Carolina; Reyes-Batlle, María; Ysea, María Alejandra Vethencourt; Pérez, Mónica V Galindo; de Rondón, Carmen Guzmán; Paduani, Anaibeth J Nessi; Pérez, Angelyseb Dorta; López-Arencibia, Atteneri; Sifaoui, Ines; de Galindo, María Virginia Pérez; de Suárez, Eva Pérez; Martínez-Carretero, Enrique; Valladares, Basilio; Piñero, José E; Lorenzo-Morales, Jacob

    2016-12-01

    Free-living amoebae of Acanthamoeba genus are opportunistic pathogens distributed worldwide. Strains included in this genus are causative agents of a fatal encephalitis and a sight-threating keratitis in humans and other animals. In this study, 550 clinical samples which were collected between 1984 and 2014 from different patients with suspected infections due to Acanthamoeba were initially screened for the presence of this amoebic genus at the Laboratorio de Amibiasis-Escuela de Bioanálisis at the Universidad Central de Venezuela. Samples were cultured in 2% Non-Nutrient agar plates seeded with a layer of heat killed Escherichia coli. From the 550 clinical samples included in this study, 18 of them were positive for Acanthamoeba genus after culture identification. Moreover, positive samples were confirmed after amplification of the Diagnostic Fragment 3 (DF3) of the Acanthamoeba18S rDNA genus and sequencing was carried out in order to genotype the isolated strains of Acanthamoeba. Furthermore, the pathogenic potential of the strains was checked by performing thermotolerance and osmotolerance assays. Sequencing of the DF3 region resulted in the identification of genotype T4 in all the isolated strains. Moreover, most isolates were thermotolerant or both thermotolerant and osmotolerant and thus were classified as potentially pathogenic strains. To the best of our knowledge, this is the first report on the molecular characterization at the genotype level of Acanthamoeba strains in Venezuela.

  20. A comparative study of the capsaicinoid and phenolic contents and in vitro antioxidant activities of the peppers of the genus Capsicum: an application of chemometrics.

    Science.gov (United States)

    Sora, Gisele Teixeira Souza; Haminiuk, Charles Windson Isidoro; da Silva, Marcos Vieira; Zielinski, Acácio Antonio Ferreira; Gonçalves, Geferson Almeida; Bracht, Adelar; Peralta, Rosane Marina

    2015-12-01

    This paper presents a comparison of the contents of capsaicin, dihydrocapsaicin and total phenolics as well as of the antioxidant activities of six types of peppers of the genus Capsicum. The varieties were analyzed in terms of their in vitro antioxidant activity using ferric reducing antioxidant powder (FRAP), 1,1-diphenyl-2-picrylhydrazyl (DPPH) and 2,2'-azinobis 3-ethylbenzothiazoline 6-sulfonate (ABTS(●+)) assays. The contents of phenolics and capsainoids as well as the antioxidant activities were higher in seeds than in pulps. The correlations (ρ < 0.01) between the phenolic composition and the capsaicinoids levels were high (r = 0.98). Similarly high were also the correlations between the antioxidant activities and the contents of total phenolics and capsaicinoids. Data were analyzed using principal component analysis (PCA), hierarchical cluster analysis (HCA) and multiple linear regression (MLR). PCA explained 97.77 % of the total variance of the data, and their separation into three groups in a scatter plot was divised. Using HCA, three clusters were suggested. Cluster one, formed by pulps (bell pepper, orange habanero, cayenne, dedo de moça and red habanero), showed the lowest levels of the compounds quantified. Most seed samples were grouped in cluster two (bell pepper, cayenne, dedo de moça and malagueta) together with malagueta pulp. Cluster three was formed by orange and red habanero seeds, which showed the highest levels of all compounds analyzed. The MRL revealed that the values of capsaicinoids and total phenols are more adequate to predict the antioxidant activity measured by the FRAP assay.

  1. Transfer of 13 species of the genus Burkholderia to the genus Caballeronia and reclassification of Burkholderia jirisanensis as Paraburkholderia jirisanensis comb. nov.

    Science.gov (United States)

    Dobritsa, Anatoly P; Linardopoulou, Elena V; Samadpour, Mansour

    2017-09-07

    A recent study of a group of Burkholderia glathei-like bacteria resulted in the description of 13 novel species of the genus Burkholderia. However, our analysis of phylogenetic positions of these species and their molecular signatures (conserved protein sequence indels) showed that they belong to the genus Caballeronia, and we propose to transfer them to this genus. The reclassified species names are proposed as Caballeroniaarationis comb. nov., Caballeroniaarvi comb. nov., Caballeroniacalidae comb. nov., Caballeroniacatudaia comb. nov., Caballeroniaconcitans comb. nov., Caballeroniafortuita comb. nov., Caballeroniaglebae comb. nov., Caballeroniahypogeia comb. nov., Caballeroniapedi comb. nov., Caballeroniaperedens comb. nov., Caballeroniaptereochthonis comb. nov., Caballeroniatemeraria comb. nov. and Caballeronia turbans comb. nov. It is also proposed to reclassify Burkholderia jirisanensis as Paraburkholderiajirisanensis comb. nov. Based on the results of the polyphasic study, B. jirisanensis had been described as a member of the A-group of the genus Burkholderiaand the most closely related to Burkholderia rhizosphaerae, Burkholderia humisilvae and Burkholderia solisilvae currently classified as belonging to the genus Paraburkholderia.

  2. The genus Geobacillus and their biotechnological potential.

    Science.gov (United States)

    Hussein, Ali H; Lisowska, Beata K; Leak, David J

    2015-01-01

    The genus Geobacillus comprises a group of Gram-positive thermophilic bacteria, including obligate aerobes, denitrifiers, and facultative anaerobes that can grow over a range of 45-75°C. Originally classified as group five Bacillus spp., strains of Bacillus stearothermophilus came to prominence as contaminants of canned food and soon became the organism of choice for comparative studies of metabolism and enzymology between mesophiles and thermophiles. More recently, their catabolic versatility, particularly in the degradation of hemicellulose and starch, and rapid growth rates have raised their profile as organisms with potential for second-generation (lignocellulosic) biorefineries for biofuel or chemical production. The continued development of genetic tools to facilitate both fundamental investigation and metabolic engineering is now helping to realize this potential, for both metabolite production and optimized catabolism. In addition, this catabolic versatility provides a range of useful thermostable enzymes for industrial application. A number of genome-sequencing projects have been completed or are underway allowing comparative studies. These reveal a significant amount of genome rearrangement within the genus, the presence of large genomic islands encompassing all the hemicellulose utilization genes and a genomic island incorporating a set of long chain alkane monooxygenase genes. With G+C contents of 45-55%, thermostability appears to derive in part from the ability to synthesize protamine and spermine, which can condense DNA and raise its Tm.

  3. Evaluation of agronomic practices for the establishment of Pinto peanut (Arachis pintoi in native pastures of Mexico

    Directory of Open Access Journals (Sweden)

    E. Castillo-Gallegos

    2009-01-01

    Full Text Available Se realizaron tres experimentos en un clima cálido y húmedo para evaluar el establecimiento de Arachis pintoi CIAT 17434: 1 cero labranza y labranza reducida, con fertilización (P, K, Mg, Ca, Zn, Cu y B o sin fertilización; 2 control de la vegetación nativa con herbicida o chapeo, con quema o sin ella; y, con o sin fertilizante fosforado; y 3, siembra, por semilla, de tres accesiones CIAT de Arachis pintoi: 17434, 18744 y 18748, usando semilla en vainas. Los suelos de los sitios experimentales fueron Ultisoles, ácidos (Durustults, con un rango de pH de 4.1 a 5.2, y una capa impermeable situada entre 0 y 25 cm de profundidad. Se evaluó: número y altura de plantas, y suelo cubierto por la leguminosa, a 4, 8 y 12 semanas después de la siembra. En el experimento 1, se muestrearon cuadrantes dentro de cada parcela de tratamiento. En los experimentos 2 y 3 se empleó un diseño de bloques completos al azar con 3 bloques como repeticiones. Se realizaron análisis de varianza de acuerdo con el diseño experimental utilizado. En el experimento 1, el efecto principal de tratamientos sobre el número de plantas fue altamente significativo en las épocas de invierno, verano y sequía. El tiempo requerido para alcanzar un 50% de cobertura fue de 21 semanas para T2 (labranza mínima, sin fertilización en invierno; 21 semanas para T4 (cero labranza, sin fertilización en sequía; y 20 semanas para T1 (labranza mínima, con fertilización y T4 en el verano. En el experimento 2, el efecto principal del tiempo después de la siembra fue altamente significativo para todas las variables de respuesta. El tratamiento herbicida+quema produjo plantas con los tallos más altos (21.0±1.6 cm que el tratamiento de herbicida-sin quema (14.5±1.1 cm. La fertilización con P no incrementó la cobertura de la leguminosa. El tratamiento chapeo sin quema y sin fertilización resultó en una menor cobertura que el tratamiento herbicida+quema+fertilización. En el

  4. Genus delineation of Chlamydiales by analysis of the percentage of conserved proteins justifies the reunifying of the genera Chlamydia and Chlamydophila into one single genus Chlamydia.

    Science.gov (United States)

    Pannekoek, Yvonne; Qi-Long, Qin; Zhang, Yu-Zhong; van der Ende, Arie

    2016-08-01

    Many studies have aimed to set up boundaries for the classification and definition of prokaryotic genus and species classification; however, studies that focused on genus-level genomic differences for existing taxonomy systems are limited. Recently, a novel method was described for prokaryotic genus delineation using the percentage of conserved proteins (POCP) between two strains to estimate their evolutionary and phenotypic distance (Qin et al. A proposed genus boundary for the prokaryotes based on genomic insights. J Bacteriol 2014; 196: :2210-5). Here, we extended the POCP analysis of the order Chlamydiales and pairwise compared all currently recognized species and candidate species of the family Chlamydiaceae as well as some species from other families. Using the taxonomy advised by the International Committee on Systematics of Prokaryotes, subcommittee on the taxonomy of the Chlamydiae, POCP analysis revealed that all pairwise comparisons of species from different families resulted in values lower than 50%, the proposed threshold for genus boundary. In contrast, all interspecies pairwise comparisons of species from the single genus within the family Chlamydiaceae resulted in POCP values higher than 70%. We conclude that the recommended genus classification of the family Chlamydiaceae is rational and that POCP analyses can provide a robust genomic index for the taxonomy of members of the order Chlamydiales in terms of genus demarcation.

  5. The Peanut (Arachis hypogaea L. Gene AhLPAT2 Increases the Lipid Content of Transgenic Arabidopsis Seeds.

    Directory of Open Access Journals (Sweden)

    Silong Chen

    Full Text Available Lysophosphatidic acid acyltransferase (LPAT, which converts lysophosphatidic acid (LPA to phosphatidic acid (PA, catalyzes the addition of fatty acyl moieties to the sn-2 position of the LPA glycerol backbone in triacylglycerol (TAG biosynthesis. We recently reported the cloning and temporal-spatial expression of a peanut (Arachis hypogaea AhLPAT2gene, showing that an increase in AhLPAT2 transcript levels was closely correlated with an increase in seed oil levels. However, the function of the enzyme encoded by the AhLPAT2 gene remains unclear. Here, we report that AhLPAT2 transcript levels were consistently higher in the seeds of a high-oil cultivar than in those of a low-oil cultivar across different seed developmental stages. Seed-specific overexpression of AhLPAT2 in Arabidopsis results in a higher percentage of oil in the seeds and greater-than-average seed weight in the transgenic plants compared with the wild-type plants, leading to a significant increase in total oil yield per plant. The total fatty acid (FA content and the proportion of unsaturated FAs also increased. In the developing siliques of AhLPAT2-overexpressing plants, the expression levels of genes encoding crucial enzymes involved in de novo FA synthesis, acetyl-CoA subunit (AtBCCP2 and acyl carrier protein 1 (AtACP1 were elevated. AhLPAT2 overexpression also promoted the expression of several key genes related to TAG assembly, sucrose metabolism, and glycolysis. These results demonstrate that the expression of AhLPAT2 plays an important role in glycerolipid production in peanuts.

  6. F-theory on Genus-One Fibrations

    CERN Document Server

    Braun, Volker

    2014-01-01

    We argue that M-theory compactified on an arbitrary genus-one fibration, that is, an elliptic fibration which need not have a section, always has an F-theory limit when the area of the genus-one fiber approaches zero. Such genus-one fibrations can be easily constructed as toric hypersurfaces, and various $SU(5)\\times U(1)^n$ and $E_6$ models are presented as examples. To each genus-one fibration one can associate a $\\tau$-function on the base as well as an $SL(2,\\mathbb{Z})$ representation which together define the IIB axio-dilaton and 7-brane content of the theory. The set of genus-one fibrations with the same $\\tau$-function and $SL(2,\\mathbb{Z})$ representation, known as the Tate-Shafarevich group, supplies an important degree of freedom in the corresponding F-theory model which has not been studied carefully until now. Six-dimensional anomaly cancellation as well as Witten's zero-mode count on wrapped branes both imply corrections to the usual F-theory dictionary for some of these models. In particular, n...

  7. Arachis pintoi COMO COBERTURA DE SUELO EN CULTIVOS DE PLÁTANO MACHO (Musa AAB EN CÁRDENAS, TABASCO, MÉXICO

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    Eder Ramos Hernández

    2011-01-01

    Full Text Available El experimento se realizó en Cárdenas, Tabasco enuna plantación de plátano macho, en un suelo con texturafranca, pH moderadamente ácido, contenido de materiaorgánica y nitrógeno total bajo; con la finalidad de evaluar larepuesta al establecimiento de Arachis pintoi Krap. y Greg.como una cobertura viva. El diseño experimental fue bloquescompletos al azar con tres replicas. Se evaluaron tresporcentajes de sombra producida por el cultivo de plátanomacho (21, 45 y 50 %. El establecimiento de A. pintoi fuerealizado en forma directa utilizando material vegetativo de 20-25 cmde longitud, el cual se plantó a una distancia de 30 cm entreplantas y líneas. Estadísticamente el nivel con menor porcentajede sombra presentó los valores más altos en el índice desobrevivencia de estolones de Arachis (ISE a los 60 díasdespués de la siembra (dds y registró cobertura del suelo de94.2 % y crecimiento lateral de estolones 112.5 cm con alturapromedio de 6.2 cm (febrero-mayo 2009.

  8. Elliptic Genus of E-strings

    CERN Document Server

    Kim, Joonho; Lee, Kimyeong; Park, Jaemo; Vafa, Cumrun

    2014-01-01

    We study a family of 2d N=(0,4) gauge theories which describes at low energy the dynamics of E-strings, the M2-branes suspended between a pair of M5 and M9 branes. The gauge theory is engineered using a duality with type IIA theory, leading to the D2-branes suspended between an NS5-brane and 8 D8-branes on an O8-plane. We compute the elliptic genus of this family of theories, and find agreement with the known results for single and two E-strings. The partition function can in principle be computed for arbitrary number of E-strings, and we compute them explicitly for low numbers. We test our predictions against the partially known results from topological strings, as well as from the instanton calculus of 5d Sp(1) gauge theory. Given the relation to topological strings, our computation provides the all genus partition function of the refined topological strings on the canonical bundle over 1/2 K3.

  9. Polyphasic taxonomy of the genus Talaromyces.

    Science.gov (United States)

    Yilmaz, N; Visagie, C M; Houbraken, J; Frisvad, J C; Samson, R A

    2014-06-01

    The genus Talaromyces was described by Benjamin in 1955 as a sexual state of Penicillium that produces soft walled ascomata covered with interwoven hyphae. Phylogenetic information revealed that Penicillium subgenus Biverticillium and Talaromyces form a monophyletic clade distinct from the other Penicillium subgenera. Subsequently, in combination with the recent adoption of the one fungus one name concept, Penicillium subgenus Biverticillium was transferred to Talaromyces. At the time, the new combinations were made based only on phylogenetic information. As such, the aim of this study was to provide a monograph on Talaromyces applying a polyphasic species concept, including morphological, molecular and physiological characters. Based on an ITS, BenA and RPB2 multigene phylogeny, we propose a new sectional classification for the genus, placing the 88 accepted species into seven sections, named sections Bacillispori, Helici, Islandici, Purpurei, Subinflati, Talaromyces and Trachyspermi. We provide morphological descriptions for each of these species, as well as notes on their identification using morphology and DNA sequences. For molecular identification, BenA is proposed as a secondary molecular marker to the accepted ITS barcode for fungi.

  10. Aspidonepsis (Asclepiadaceae, a new southern African genus

    Directory of Open Access Journals (Sweden)

    A. Nicholas

    1992-12-01

    Full Text Available Aspidonepsis, an endemic southern African genus, is described and compared to the closely allied genus Aspidoglossum. This newly described genus is composed of two subgenera, Aspidonepsis and Unguilobium. consisting of three and two species respectively.  Asclepias diploglossa, A. flava, A. cognata and A. reneensis are transferred to Aspidonepsis. and A. shebae is newly described. All species are discussed, illustrated and a key is given to aid in their identification.

  11. The genus Lolium; taxonomy and genetic resources.

    OpenAIRE

    Loos, B.P.

    1994-01-01

    Several aspects of variation within the genus Lolium, and more in detail within Lolium perenne (perennial ryegrass) have been highlighted. As the results are extensively discussed in each chapter, the general discussion is focused on two aspects of the research.SpeciationIt is clear that the genus Lolium is a very variable genus. The variation within the species reduces the clarity of separation of the species. Stebbins (1956) found the differences between Lolium and Festuca not sufficient to...

  12. 点地梅属植物化学成分与药理活性研究进展%Phytochemical and Biological Studies on Plants from the Genus Androsace

    Institute of Scientific and Technical Information of China (English)

    何希瑞; 魏桂芳; 姚宏; 常育; 徐磊; 张春玲

    2012-01-01

    The present paper reviews the chemical compounds, the biological activities and clinical application of Androsace plants, which would provide references for development and utilization of Androsac genus. Index the literatures in CNKI, PubMed and Science Direct direct databases choosing titles or keywords as 'Androsace'. Androsace is an important genus of the family Primulaceae. About 100 species distribute in many zones of the world. Up to now, more than 30 compounds have been isolated and identified, and the flavonoids and triterpenoid saponins are the main constitutent. In vivo and in vitro studies indicated that rude extracts and monomer compounds (triterpenoid saponins} from genus Androsace possessed wide pharmacological actions, especially in anti-tumor, anti-early pregnancy and anti-viruses, etc.%主要从化学成分、药理活性及临床应用方面对国内外点地梅属植物研究概况进行整理,希望能够有助于点地梅属药用植物的开发和利用.借助CNKI数据库以题名或关键词为“点地梅”,PubMed以及Science Direct数据库系统以题名或关键词为“Androsace”经行检索,整理了近年来有关点地梅属植物的化学成分、药理活性及临床应用研究成果.点地梅属植物是报春花科( Primulaceae)植物中的一个大属.全世界约有100种,医药前景良好.目前,已经从点地梅属药用植物中分离得到30多种化合物,其中黄酮和三萜皂苷类为主要含有成分.体内外实验研究表明,点地梅属药用植物的粗提取物和单体化合物(三萜皂苷类成分)具有广泛的药理作用,尤其是在抗肿瘤、抗早孕和抗病毒方面效果显著.

  13. THE GENUS DURIO Adans. (Bombac.

    Directory of Open Access Journals (Sweden)

    A. J. G. H. KOSTERMANS

    2015-11-01

    Full Text Available The genus Durio comprises, as far as known, 27 species. The centre ofdistribution is Borneo with 19 species, followed by Malaya with 11 spe-cies and Sumatra with 7 species. It is likely, when Sumatra will be betterexplored, that this island will prove to have many more species. An exclave of the area of distribution is found in Burma, where one endemic species occurs. The common Durio zibethinus Murr. probably originated in Borneo or in Sumatra. It is now widely cultivated outside of its former area and in many places it has become spontaneous.The genus Durio is subdivided into two subgenera: Durio and BoschiaKosterm. & Soegeng, according to the way of dehiscence of the anthers(with a longitudinal slit in the former, with an apical pore in the latter.A key to the species is proposed. A map is added, to show distribution and endemism. Each species is amply described and provided with a drawing . Economic and ecological data are given.

  14. Pollen morphology of the genus Cornukaempferia (Zingiberaceae) in Thailand

    Institute of Scientific and Technical Information of China (English)

    Piyaporn SAENSOUK; Pranom CHANTARANOTHAI; Piyada THEERAKULPISUT

    2009-01-01

    Cornukaempferia is a recently described genus of Zingiberaceae which only occurs in Thailand as a rare genus with limited geographical distribution. Only three species have been described so far, including a recently described new species, C. larsenii. These three species are morphologically very similar and additional data on other biological aspects are useful for the elucidation of their relationship. Pollen morphology of all three species of genus Cornukaempferia has been studied by light microscopy and scanning electron microscopy. The pollen grains are monad, spherical, inaperturate. The exine sculpture is echinate with psilate between the spines for C. aurantiflora and C. longipetiolata, or echinate with regulate between the spines for C. larsenii. This obser-vation helps support the taxonomic status of C. larsenii.

  15. Revision of the genus Philoplitis Nixon (Hymenoptera, Braconidae, Microgastrinae

    Directory of Open Access Journals (Sweden)

    Jose Fernandez-Triana

    2009-09-01

    Full Text Available The genus Philoplitis Nixon is revised. Three new species, P. masneri Fernández-Triana & Goulet, sp. n., P. punctatus Fernández-Triana & Goulet, sp. n., and P. striatus Fernández-Triana & Goulet, sp. n. are described, and a key is provided to the World species. The genus, previously known only from the Oriental region, is here recorded from the Afrotropical region. Evidence suggests that its included species are broadly found in rainforest areas of the Old World tropics. Clarification and suggestions about some character states previously used with Philoplitis within the context of Microgastrinae phylogenetic studies are also provided.

  16. Comparative Genomics Reveals High Genomic Diversity in the Genus Photobacterium.

    Science.gov (United States)

    Machado, Henrique; Gram, Lone

    2017-01-01

    Vibrionaceae is a large marine bacterial family, which can constitute up to 50% of the prokaryotic population in marine waters. Photobacterium is the second largest genus in the family and we used comparative genomics on 35 strains representing 16 of the 28 species described so far, to understand the genomic diversity present in the Photobacterium genus. Such understanding is important for ecophysiology studies of the genus. We used whole genome sequences to evaluate phylogenetic relationships using several analyses (16S rRNA, MLSA, fur, amino-acid usage, ANI), which allowed us to identify two misidentified strains. Genome analyses also revealed occurrence of higher and lower GC content clades, correlating with phylogenetic clusters. Pan- and core-genome analysis revealed the conservation of 25% of the genome throughout the genus, with a large and open pan-genome. The major source of genomic diversity could be traced to the smaller chromosome and plasmids. Several of the physiological traits studied in the genus did not correlate with phylogenetic data. Since horizontal gene transfer (HGT) is often suggested as a source of genetic diversity and a potential driver of genomic evolution in bacterial species, we looked into evidence of such in Photobacterium genomes. Genomic islands were the source of genomic differences between strains of the same species. Also, we found transposase genes and CRISPR arrays that suggest multiple encounters with foreign DNA. Presence of genomic exchange traits was widespread and abundant in the genus, suggesting a role in genomic evolution. The high genetic variability and indications of genetic exchange make it difficult to elucidate genome evolutionary paths and raise the awareness of the roles of foreign DNA in the genomic evolution of environmental organisms.

  17. Ethnomedicinal uses, phytochemistry and pharmacological properties of the genus Boerhavia.

    Science.gov (United States)

    Patil, Kapil S; Bhalsing, Sanjivani R

    2016-04-22

    The genus Boerhavia is widely distributed in tropical, subtropical and temperate regions of the world including Mexico, America, Africa, Asia, Indian Ocean Islands, Pacific Islands and Australia. The genus Boerhavia is extensively used by local peoples and medicinal practitioners for treatments of hepatitis, urinary disorders, gastro intestinal diseases, inflammations, skin problems, infectious diseases and asthma. Present review focused on traditional uses, phytochemistry, pharmacology and toxicology of Boerhavia genus to support potential scope for advance ethnopharmacological study. Information on the Boerhavia species was collected from classical books on medicinal plants, pharmacopoeias and scientific databases like PubMed, Scopus, GoogleScholar, Web of Science and others. Also scientific literatures based on ethnomedicinal surveys, Ph.D. and M.Sc. dissertations, published papers from Elsevier, Taylor and Francis, Springer, ACS as well as Wiley publishers and reports by government bodies and documentations were assessed. A total of 180 compounds from Boerhavia genus were isolated of which B. diffusa alone shared around 131 compounds and for most of which it is currently an exclusive source. In the genus, phenolic glycosides and flavonoids contribute approximately 97 compounds. These includes eupalitin, rotenoids like boeravinones, coccineons, alkaloid i.e. betanin and punarnavine etc., showing vital pharmaceutical activities such as anticancer, anti-inflammatory, antioxidant and immunomodulatory. Boerhavia is an important genus with wide range of medicinal uses. However, most of the available scientific literatures have lacked relevant doses, duration and positive controls for examining bioefficacy of extracts and its active compounds. In some studies, taxonomic errors were encountered. Moreover, there is need for accurate methods in testing the safety and ethnomedicinal validity of Boerhavia species. Copyright © 2016. Published by Elsevier Ireland Ltd.

  18. Relationship between root characteristics of peanut in hydroponics and pot studies

    Science.gov (United States)

    A large root system can be an important character for drought tolerance. Measuring root characteristics in soil medium is tedious, time consuming, and labor intensive. The objective of this study was to determine the association between root characteristics of peanut (Arachis hypogaea L.) Grown in...

  19. Relative bioavailability of three newly developed albendazole formulations : a randomized crossover study with healthy volunteers

    NARCIS (Netherlands)

    Rigter, I M; Schipper, H G; Koopmans, R P; van Kan, H J M; Frijlink, H W; Kager, P A; Guchelaar, H-J

    2004-01-01

    This study of healthy volunteers shows that the relative bioavailability of albendazole formulations that use arachis oil-polysorbate 80 or hydroxypropyl-beta-cyclodextrin as an excipient was enhanced 4.3- and 9.7-fold compared to the results seen with commercial tablets. Administration of macrogol

  20. Relative bioavailability of three newly developed albendazole formulations : a randomized crossover study with healthy volunteers

    NARCIS (Netherlands)

    Rigter, I M; Schipper, H G; Koopmans, R P; van Kan, H J M; Frijlink, H W; Kager, P A; Guchelaar, H-J

    2004-01-01

    This study of healthy volunteers shows that the relative bioavailability of albendazole formulations that use arachis oil-polysorbate 80 or hydroxypropyl-beta-cyclodextrin as an excipient was enhanced 4.3- and 9.7-fold compared to the results seen with commercial tablets. Administration of macrogol

  1. Revisiting the genus Photobacterium: taxonomy, ecology and pathogenesis.

    Science.gov (United States)

    Labella, Alejandro M; Arahal, David R; Castro, Dolores; Lemos, Manuel L; Borrego, Juan J

    2017-03-01

    The genus Photobacterium, one of the eight genera included in the family Vibrionaceae, contains 27 species with valid names and it has received attention because of the bioluminescence and pathogenesis mechanisms that some of its species exhibit. However, the taxonomy and phylogeny of this genus are not completely elucidated; for example, P. logei and P. fischeri are now considered members of the genus Aliivibrio, and previously were included in the genus Vibrio. In addition, P. damselae subsp. piscicida was formed as a new combination for former Vibrio damsela and Pasteurella piscicida. Moreover, P. damselae subsp. damselae is an earlier heterotypic synonym of P. histaminum. To avoid these incovenences draft and complete genomic sequences of members of Photobacterium are increasingly becoming available and their use is now routine for many research laboratories to address diverse goals: species delineation with overall genomic indexes, phylogenetic analyses, comparative genomics, and phenotypic inference. The habitats and isolation source of the Photobacterium species include seawater, sea sediments, saline lake waters, and a variety of marine organisms with which the photobacteria establish different relationships, from symbiosis to pathogenic interactions. Several species of this genus contain bioluminescent strains in symbiosis with marine fish and cephalopods; in addition, other species enhance its growth at pressures above 1 atmosphere, by means of several high-pressure adaptation mechanisms and for this, they may be considered as piezophilic (former barophilic) bacteria. Until now, only P. jeanii, P. rosenbergii, P. sanctipauli, and the two subspecies of P. damselae have been reported as responsible agents of several pathologies on animal hosts, such as corals, sponges, fish and homeothermic animals. In this review we have revised and updated the taxonomy, ecology and pathogenicity of several members of this genus. [Int Microbiol 20(1): 1-10 (2017

  2. [Evaluation of the Autoscan-4 System for the identification of strains of the genus Salmonella].

    Science.gov (United States)

    Usera, M A; Echeita, A

    1991-06-01

    A study was performed to compare the Autoscan-4 with conventional biochemical methods to identify isolates of the Salmonella genus. The Autoscan-4 yielded correct identification of the 99% Salmonella isolates at the genus and species level, but failed to identify 74% Salmonella isolates of the "Arizona" group, making necessary to perform subspecies biochemical reactions.

  3. Anatomic structure of stem leave petioles of some species of the genus Potentilla (Rosaceae

    Directory of Open Access Journals (Sweden)

    T. N. Motorykina

    2015-10-01

    Full Text Available The anatomic structure of stem leaf petioles of 15 species of the genus Potentilla is studied. During the research the anatomical features characterizing the species Potentilla as a whole, and also characters whichcan be used for differentiation of subgenera, sections and closely related species of this genus are allocated.

  4. Nuclear DNA content variation within the genus Daucus (Apiaceae) determined by flow cytometry

    Science.gov (United States)

    The genus Daucus (Apiaceae) comprises species from around the world, covering a wide climatic range, and showing great morphological plasticity. Both cultivated and wild forms are described within the genus. The aim of the present study was to estimate the genome size variability in the collection o...

  5. Resurrection of the genus Aphyllon for New World broomrapes (Orobanche s.l., Orobanchaceae).

    Science.gov (United States)

    Schneider, Adam C

    2016-01-01

    Recent phylogenetic studies support a monophyletic clade of New World broomrapes (Orobanche sects. Gymnocaulis and Nothaphyllon) sister to the Old World genus Phelipanche. I place the New World taxa in the genus Aphyllon, propose 21 new combinations, and provide a list of currently accepted taxa.

  6. Molecular phylogeny of the plant pathogenic genus Botrytis and the evolution of host specificity

    NARCIS (Netherlands)

    Staats, M.; Baarlen, van P.; Kan, van J.A.L.

    2005-01-01

    The cosmopolitan genus Botrytis contains 22 recognized species and one hybrid. The current classification is largely based on morphological characters and, to a minor extent, on physiology and host range. In this study, a classification of the genus was constructed based on DNA sequence data of

  7. Evolution of the Genus Homo

    Science.gov (United States)

    Tattersall, Ian; Schwartz, Jeffrey H.

    2009-05-01

    Definition of the genus Homo is almost as fraught as the definition of Homo sapiens. We look at the evidence for “early Homo,” finding little morphological basis for extending our genus to any of the 2.5-1.6-myr-old fossil forms assigned to “early Homo” or Homo habilis/rudolfensis. We also point to heterogeneity among “early African Homo erectus,” and the lack of apomorphies linking these fossils to the Asian Homo erectus group, a cohesive regional clade that shows some internal variation, including brain size increase over time. The first truly cosmopolitan Homo species is Homo heidelbergensis, known from Africa, Europe, and China following 600 kyr ago. One species sympatric with it included the >500-kyr-old Sima de los Huesos fossils from Spain, clearly distinct from Homo heidelbergensis and the oldest hominids assignable to the clade additionally containing Homo neanderthalensis. This clade also shows evidence of brain size expansion with time; but although Homo neanderthalensis had a large brain, it left no unequivocal evidence of the symbolic consciousness that makes our species unique. Homo sapiens clearly originated in Africa, where it existed as a physical entity before it began (also in that continent) to show the first stirrings of symbolism. Most likely, the biological underpinnings of symbolic consciousness were exaptively acquired in the radical developmental reorganization that gave rise to the highly characteristic osteological structure of Homo sapiens, but lay fallow for tens of thousands of years before being “discovered” by a cultural stimulus, plausibly the invention of language.

  8. A plastid phylogeny and character evolution of the Old World fern genus Pyrrosia (Polypodiaceae) with the description of a new genus: Hovenkampia (Polypodiaceae).

    Science.gov (United States)

    Zhou, Xin-Mao; Zhang, Liang; Chen, Cheng-Wei; Li, Chun-Xiang; Huang, Yao-Moan; Chen, De-Kui; Lu, Ngan Thi; Cicuzza, Daniele; Knapp, Ralf; Luong, Thien Tam; Nitta, Joel H; Gao, Xin-Fen; Zhang, Li-Bing

    2017-09-01

    The Old World fern genus Pyrrosia (Polypodiaceae) offers a rare system in ferns to study morphological evolution because almost all species of this genus are well studied for their morphology, anatomy, and spore features, and various hypotheses have been proposed in terms of the phylogeny and evolution in this genus. However, the molecular phylogeny of the genus lags behind. The monophyly of the genus has been uncertain and a modern phylogenetic study of the genus based on molecular data has been lacking. In the present study, DNA sequences of five plastid markers of 220 accessions of Polypodiaceae representing two species of Drymoglossum, 14 species of Platycerium, 50 species of Pyrrosia, and the only species of Saxiglossum (subfamily Platycerioideae), and 12 species of other Polypodiaceae representing the remaining four subfamilies are used to infer a phylogeny of the genus. Major results and conclusions of this study include: (1) Pyrrosia as currently circumscribed is paraphyletic in relation to Platycerium and can be divided into two genera: Pyrrosia s.s. and Hovenkampia (gen. nov.), with Hovenkampia and Platycerium forming a strongly supported clade sister to Pyrrosia s.s.; (2) Subfamily Platycerioideae should contain three genera only, Hovenkampia, Platycerium, and Pyrrosia s.s.; (3) Based on the molecular phylogeny, macromorphology, anatomical features, and spore morphology, four major clades in the genus are identified and three of the four are further resolved into four, four, and six subclades, respectively; (4) Three species, P. angustissima, P. foveolata, and P. mannii, not assigned to any groups by Hovenkamp (1986) because of their unusual morphology, each form monospecific clades; (5) Drymoglossum is not monophyletic and those species previously assigned to this genus are resolved in two different subclades; (6) Saxiglossum is resolved as the first lineage in the Niphopsis clade; and (7) The evolution of ten major morphological characters in the

  9. A new genus of Lindsaeoid ferns

    NARCIS (Netherlands)

    Kramer, K.U.

    1957-01-01

    In revising the New World representatives of the genus Lindsaea, the author came across a fern specimen from Borneo preserved in the Rijksherbarium, Leiden, that did not seem to fit into any described genus. It had been described as Schizoloma stortii v. A. v. R., but in the author’s opinion the gen

  10. A monograph of the Genus Aristida

    NARCIS (Netherlands)

    Henrard, J.Th.

    1929-01-01

    In a preliminary work: „A critical Revision of the genus Aristida”, I have given a review of all the hitherto described species of this genus with the citation of the literature, the exact copies of the authentic descriptions and the figures of the spikelet-characters, taken from the type specimens

  11. New Forms in the genus Erebia (Lepidoptera)

    NARCIS (Netherlands)

    Eisner, C.

    1946-01-01

    A revision of the material belonging to the genus Erebia Dalman in the Rijksmuseum van Natuurlijke Historie at Leiden, mainly based on the "Monograph of the genus Erebia" by B. C. S. Warren (London, 1936), induced me to describe a number of new subspecies and aberrations, and to make some remarks on

  12. New Forms in the genus Erebia (Lepidoptera)

    NARCIS (Netherlands)

    Eisner, C.

    1946-01-01

    A revision of the material belonging to the genus Erebia Dalman in the Rijksmuseum van Natuurlijke Historie at Leiden, mainly based on the "Monograph of the genus Erebia" by B. C. S. Warren (London, 1936), induced me to describe a number of new subspecies and aberrations, and to make some remarks on

  13. A monograph of the Genus Aristida

    NARCIS (Netherlands)

    Henrard, J.Th.

    1929-01-01

    In a preliminary work: „A critical Revision of the genus Aristida”, I have given a review of all the hitherto described species of this genus with the citation of the literature, the exact copies of the authentic descriptions and the figures of the spikelet-characters, taken from the type specimens

  14. A taxonomic revision of the genus Podocarpus

    NARCIS (Netherlands)

    Laubenfels, de D.J.

    1985-01-01

    In connection with the forthcoming revision of the Coniferae for the Flora Malesiana, the author thought it necessary to revise the genus Podocarpus. Although this genus has a substantial representation in Malesia (30 species), the revision is too involved to be appropriate with the Flora Malesiana

  15. Resurrection of Angelesia, a Southeast Asian genus of Chrysobalanaceae

    NARCIS (Netherlands)

    Sothers, C.A.; Prance, G.T.

    2014-01-01

    Licania subg. Angelesia is composed of only three species restricted to Southeast Asia and is currently delimited as one of four subgenera of Licania, a species-rich genus of mostly Neotropical taxa. Molecular phylogenetic studies involving Chrysobalanaceae have revealed that Licania is polyphyletic

  16. Notes on the genus Punctelia in Denmark

    DEFF Research Database (Denmark)

    Christensen, Steen; Søchting, Ulrik

    2007-01-01

    establishing the genus Punctelia, did not re-combine P. ulophylla, nor include it in the accompanying key. She probably considered it as a synonym of P. subrudecta. In a study on European Punctelia species with lecanoric acid, van Herk & Aptroot (2000) accepted the taxon and made the combination Punctelia...

  17. Termites of the Genus Odontotermes are Optionally Keratophagous

    NARCIS (Netherlands)

    Freymann, Bernd P.; Visser, Sara N. de; Mayemba, Emilian P.; Olff, Han

    2007-01-01

    In this study we tested experimentally whether the consumption of mammalian hooves by termites of the genus Odontotermes is a mere incidental, previously overlooked event, or whether higher termites frequently exploit hooves of ungulates as a supplementary food source. The experiment was conducted i

  18. Pyrrolizidine alkaloids from Bulgarian species of the genus Senecio

    Directory of Open Access Journals (Sweden)

    NADEZHDA KOSTOVA

    2006-12-01

    Full Text Available Nine Bulgarian species from the genus Senecio were studied phytochemically and/or by GC-MS analysis. Senecivernine-N-oxide was isolated and identified by spectral data for the first time. Different types of pyrrolizidine alkaloids were tested for cytotoxicity on murine lymphocytes. At a concentration of 100 µg/ml, the alkaloid retroisosenine showed immunosuppressive effect.

  19. Siegel modular forms of genus 2 and level 2

    NARCIS (Netherlands)

    Cléry, F.; van der Geer, G.; Grushevsky, S.

    2015-01-01

    We study vector-valued Siegel modular forms of genus 2 on the three level 2 groups Γ[2] ◁ Γ1[2] ◁ Γ0[2] ⊂ Sp(4, ℤ). We give generating functions for the dimension of spaces of vector-valued modular forms, construct various vector-valued modular forms by using theta functions and describe the structu

  20. Chamber behavior of double Hurwitz numbers in genus 0

    NARCIS (Netherlands)

    Shadrin, S.; Shapiro, M.; Vainshtein, A.

    2008-01-01

    We study double Hurwitz numbers in genus zero counting the number of covers CP1 → CP1 with two branching points with a given branching behavior. By the recent result due to Goulden, Jackson and Vakil, these numbers are piecewise polynomials in the multiplicities of the preimages of the branching poi

  1. First report of the genus Retortamonas (Sarcomastigophora: Retortamonadidae in birds

    Directory of Open Access Journals (Sweden)

    Rafael A Martínez-Díaz

    2001-10-01

    Full Text Available In studies carried out on the parasites infecting ostriches (Struthio camelus in Spain, trophozoites of Retortamonas sp. have been found in the intestinal contents of 28 out of 146 slaughtered ostriches. The species infecting ostriches could not be determined from the morphological data available. However, these findings are important as they constitute the first report of the genus Retortamonas in birds.

  2. Regeneration and genetic transformation in the Vitis genus.

    NARCIS (Netherlands)

    Martinelli, L.

    1997-01-01

    This work is a contribution to the development of regeneration systems and genetic transformation in the Vitis genus and opens interesting perspectives to the application of molecular techniques for study interesting traits, as well as for genetic improvement of grape.Somatic embryogenesis from leaf

  3. Revision of the Genus Heterometrus Hemprich & Ehrenberg (Scorpionidae, Arachnidea)

    NARCIS (Netherlands)

    Couzijn, H.W.C.

    1981-01-01

    The author deals with taxonomy, character variation, phylogeny and biogeography of Heterometrus, a scorpion genus occurring in Southeast Asia. The taxonomic value of 131 characters is studied, including 75 biometric ones; 72 characters are selected to be used in the present revision for purposes of

  4. ENDOPARASITIC NEMATODES OF THE GENUS PRATYLENCHUS ON SOYBEAN

    OpenAIRE

    Ivana Majić

    2010-01-01

    The aims of the study were to determine susceptibility of soybean cultivars to root lesion nematodes (genus Pratylenchus), effect of intensity of arbuscular mycorrhizal fungi (AMF) colonization on penetration of endoparasitic nematodes in soybean roots, and trophic biodiversity of nematode community in soybean. In the period 2005 - 2007, investigations were conducted at experimental sites of Agricultural Institute Osijek. Seven soybean cultivars were included (Korana, ...

  5. Sugawara construction for higher genus Riemann surfaces

    Science.gov (United States)

    Schlichenmaier, Martin

    1999-04-01

    By the classical genus zero Sugawara construction one obtains representations of the Virasoro algebra from admissible representations of affine Lie algebras (Kac-Moody algebras of affine type). In this lecture, the classical construction is recalled first. Then, after giving a review on the global multi-point algebras of Krichever-Novikov type for compact Riemann surfaces of arbitrary genus, the higher genus Sugawara construction is introduced. Finally, the lecture reports on results obtained in a joint work with O. K. Sheinman. We were able to show that also in the higher genus, multi-point situation one obtains (from representations of the global algebras of affine type) representations of a centrally extended algebra of meromorphic vector fields on Riemann surfaces. The latter algebra is a generalization of the Virasoro algebra to higher genus.

  6. The genus Boschniakia in China: An ethnopharmacological and phytochemical review.

    Science.gov (United States)

    Zhang, Le; Zhao, Yunshan; Wang, Zhipeng A; Wei, Kunhua; Qiu, Bin; Zhang, Chunhong; Wang-Müller, QiYan; Li, Minhui

    2016-12-24

    As a group of important medicine plants, Boschniakia rossica (Cham. et Schltdl) Fedtsch. and B. himalaica Hook.f.et Thoms, which are the only two species in the genus Boschniakia (Orobanchaceae), have long been used in traditional Chinese medicine for their multiple therapeutic uses related to enhanced renal function, erectile dysfunction, defaecate and hepatoprotective. Additionally, the two species are also used as dietary supplements in wine, cosmetics, and other healthy food. By providing comprehensive information and data of genus Boschniakia on botany, traditional medicinal uses, phytochemistry, pharmacological research and toxicology, this review aims to summary the group of natural compounds from Boschniakia discovered so far. The other aims are to reference research findings of their biological activities and functions in medicine, physiology, and cell biology to highlight the compound candidates which can be used for further drug discovery in several pharmaceutical areas including antioxidation, anticancer, anti-inflammation, anti-senile, and immunology. All of the available information on B. rossica and B. himalaica was collected from the electronic resources (such as PubMed, SciFinder Scholar, CNKI, TPL (www.theplantlist.org), Google Scholar, Baidu Scholar, and Web of Science). After a comprehensive analysis of the literatures from available online sources, the results show that both species of genus Boschniakia are valuable and popular herbal medicines with potentials to cure various ailments. The phytochemical studies revealed that the chemical compositions of this genus were mainly iridoid glycosides and phenylpropanoid glycosides. To date, 112 compounds have been isolated from the genus, while their crude extracts and purified compounds have been found to possess a wide range of biological activities including anti-senile, antitumor and anticancer, anti-inflammatory, protecting liver, boost memory, anti-oxidation, anti-lipid peroxidative, and

  7. Revision of genus Steindachneridion (Siluriformes: Pimelodidae

    Directory of Open Access Journals (Sweden)

    Julio Cesar Garavello

    2005-12-01

    Full Text Available After several years collecting in the type-localities and studying representative samples of genus Steindachneridion Eigenmann & Eigenmann, 1919 from Brazilian and foreign museums, a taxonomic revision of the Recent species of the genus is presented, including the description of a new species from the rio Iguaçu, above the great falls. Steindachneridion species are large sized fishes, reaching 1000 mm total length or more, and sharing some anatomical characters that, at least tentatively, support the monophyly of the genus. In addition to the general features found in the Pimelodidae, the species S. amblyurum (Eigenmann & Eigenmann, 1888, S. parahybae (Steindachner, 1877, S. doceanum (Eigenmann & Eigenmann, 1889, S. scriptum (Miranda Ribeiro, 1918, S. punctatum (Miranda Ribeiro, 1918, and S. melanodermatum, new species, share the shape of the vomer tooth plates, six to eight branched rays in the dorsal-fin, and a low number of gill-rakers. All species, except fossil ones, are redescribed and a key for their identification is provided.Após vários anos coletando nas localidades tipo e estudando amostras representativas de museus brasileiros e estrangeiros, é apresentada uma revisão taxonômica das espécies Recentes do gênero Steindachneridion Eigenmann & Eigenmann, 1919, incluindo a descrição de uma espécie nova da bacia do rio Iguaçu, acima das Cataratas do Iguaçu. Em comum, os adultos de todas as espécies apresentam grande porte, até 1000 mm ou mais de comprimento padrão e compartilham alguns caracteres anatômicos discutidos neste estudo, que pelo menos preliminarmente suportam o monofiletismo do gênero. Além das características gerais de Pimelodidae, S. amblyurum (Eigenmann & Eigenmann, 1888, S. parahybae (Steindachner, 1877, S. doceanum (Eigenmann & Eigenmann, 1889, S. scriptum (Miranda Ribeiro, 1918, S. punctatum (Miranda Ribeiro, 1918 e S. melanodermatum, espécie nova, têm em comum a forma das placas dentígeras do

  8. Double Fertilization and Duration of Phases in Peanut (Arachis hgpogaea L.)%花生双受精过程及其经历时间

    Institute of Scientific and Technical Information of China (English)

    史春艳; 申家恒; 李伟

    2014-01-01

    通过石蜡切片技术研究了花生双受精作用的全过程,结果表明,开花后1h花生的花粉管内的生殖细胞进入有丝分裂,大约3h完成。开花后8h左右精子已经释放到胚囊,开花后9~13h精核分别与卵细胞和极核或次生核融合。卵细胞受精之后,直到开花后30 h合子中的2个核仁渐渐融合,进入分裂期,合子多数是横分裂,少部分纵分裂,开花后32 h合子分裂形成二细胞原胚。合子休眠期为19 h,极核在受精之前一部分融合成次生核,极核或次生核受精之后,在开花后13 h 几乎大部分融合结束,其中的一个极核或次生核中出现雄性核仁,形成初生胚乳核,初生胚乳核不经休眠或极短时间的休眠在开花后15 h分裂。本研究提供了花生受精过程的雌雄性细胞融合形态变化与相应经历的时间。确定了花生合子休眠期,丰富了花生胚胎学资料,对花生育种、转基因操作等具有重要意义。%We used paraffin section technology to observe fertilization and duration of phased in fertilization of Arachis hypogaea L. The results indicated that reproductive cell in the pollen came into mitosis tube one hour after bloom, the mitosis lasted about three hours. Sperms released to embryonary sac at about eight hours after flowering. Sperm and egg cell or polar nucleus or sec-ondary nucleus fused from nine to fifteen hours after flowering. Fusion needed about four hours. There were obvious isometrical two nuclei in the zygote at 30 hours after the two nucleole fusion, which came into division stage. Most of zygote had transverse division, and a few longitudinal division. First division needed about 36 hours after bloom, then formed two-cell proembryo and zygote had a dormant period for about 19 hours. After polar nucleus or secondary nucleus fertilization, almost the fusion com-pleted in 13 hours after bloom, and male nucleolus appeared in one of polar nucleus or secondary nucleus, forming primary en

  9. Influence of seaweed extract as an organic fertilizer on the growth and yield ofArachis hypogeaL. and their elemental composition usingSEM-EnergyDispersiveSpectroscopic analysis

    Institute of Scientific and Technical Information of China (English)

    G. Ganapathy Selvam; K. Sivakumar

    2014-01-01

    Objective:To investigate the effect ofSeaweedLiquidFertilizer(SLF) of the red seaweedHypnea musciformis(Wulfen)Lamouroux(H. musciformis). on the growth, biochemical and pigment characteristics ofArachis hypogea(A. hypogea).Methods:Experiments were conducted on ground nut to study the potential red alga ofH. musciformis as a biofertilizer.The seeds were sown in soil andSLF were added to soil bed in five different concentrations separately(1%,2%, 4%,6% and8% w/v).Results:The2% concentration of water extract showed better results of growth parameters, biochemical and pigments constitutions.Among the different concentrations ofSLF investigated, the plants that received with2%SLF showed maximum germination percentage, fresh weight, dry weight, root and shoot length, number of branches, leaf area, root nodules and content of total chlorophyll, chlorophyll a and b, protein, carbohydrate and lipid were observed at2% concentration ofSLF.The leaf of2%SLF treated A. hypogea has subjected toScanningElectronMicroscopy withEnergyDispersive spectroscopic analysis, it revealed that the presence of ten elements in the following order:Ca>P>N>Na>K>Mg>Mn>S>Fe>Zn in treated andCa>N>P>Na>Mg>Mn>K>Zn>S>Fe in control plant.The data generated from study reveal that SLF ofH. musciformiscould be used as foliar spray at low concentration of2% to maximize the growth and yield of A. hypogeaand also increase the number of stomata in the leaf.Conclusion:It is suggested that there are considerable gains to be made in increasing yield and stabilizing the yield in environments characterized by terminal requirement for organic and by shortening crop duration nutrient management appear promising.

  10. Ethnobotany, chemistry, and biological activities of the genus Tithonia (Asteraceae).

    Science.gov (United States)

    Chagas-Paula, Daniela A; Oliveira, Rejane B; Rocha, Bruno A; Da Costa, Fernando B

    2012-02-01

    The genus Tithonia is an important source of diverse natural products, particularly sesquiterpene lactones, diterpenes, and flavonoids. The collected information in this review attempts to summarize the recent developments in the ethnobotany, biological activities, and secondary metabolite chemistry of this genus. More than 100 structures of natural products from Tithonia are reported in this review. The species that has been most investigated in this genus is T. diversifolia, from which ca. 150 compounds were isolated. Biological studies are described to evaluate the anti-inflammatory, analgesic, antimalarial, antiviral, antidiabetic, antidiarrhoeal, antimicrobial, antispasmodic, vasorelaxant, cancer-chemopreventive, cytotoxic, toxicological, bioinsecticide, and repellent activities. A few of these studies have been carried out with isolated compounds from Tithonia species, but the majority has been conducted with different extracts. The relationship between the biological activity and the toxicity of compounds isolated from the plants of this genus as well as T. diversifolia extracts still remains unclear, and mechanisms of action remain to be determined. Copyright © 2012 Verlag Helvetica Chimica Acta AG, Zürich.

  11. Towards a phylogeny of the genus Vibrio based on 16S rRNA sequences.

    Science.gov (United States)

    Dorsch, M; Lane, D; Stackebrandt, E

    1992-01-01

    The inter- and intrageneric relationships of the genus Vibrio were investigated by performing a comparative analysis of the 16S rRNAs of 10 species, including four pathogenic representatives. The results of immunological and 5S rRNA studies were confirmed in that the genus is a neighboring taxon of the family Enterobacteriaceae. With regard to the intrageneric structure, Vibrio alginolyticus, Vibrio campbellii, Vibrio natriegens, Vibrio harveyi, Vibrio proteolyticus, Vibrio parahaemolyticus, and Vibrio vulnificus form the core of the genus, while Vibrio (Listonella) anguillarum, Vibrio diazotrophicus, and Vibrio hollisae are placed on the outskirts of the genus. Variable regions around positions 80, 180, and 450 could be used as target sites for genus- and species-specific oligonucleotide probes and polymerase chain reaction primers to be used in molecular identification.

  12. Phylogenetic investigation of the genus Raoiella (Prostigmata: Tenuipalpidae): diversity, distribution, and world invasions.

    Science.gov (United States)

    Dowling, A P G; Ochoa, R; Beard, J J; Welbourn, W C; Ueckermann, E A

    2012-08-01

    The genus Raoiella is best known because of the red palm mite, R. indica, a major pest of palms spreading aggressively throughout the Americas. Not much was known about the biology, geographic origins, or evolutionary history of the genus when R. indica emerged as a major invasive pest. This paper attempts to address some of the basic historical questions regarding the palm mite as well as the genus. Molecular characters from COI and 28S regions were used to produce a phylogenetic hypothesis for the genus in an effort to understand its geographic origin. It also uses COI barcode data to delimit several potentially new species discovered by the authors in Australia. Results show a basal split between R. indica and all other Raoiella species, which indicates Africa or the Middle East as the most probable origin of the genus. Additionally, COI data suggests that at least eight new species are represented among the 20 Australian populations included in this study.

  13. Preliminary Cluster Analysis For Several Representatives Of Genus Kerivoula (Chiroptera: Vespertilionidae) in Borneo

    Science.gov (United States)

    Hasan, Noor Haliza; Abdullah, M. T.

    2008-01-01

    The aim of the study is to use cluster analysis on morphometric parameters within the genus Kerivoula to produce a dendrogram and to determine the suitability of this method to describe the relationship among species within this genus. A total of 15 adult male individuals from genus Kerivoula taken from sampling trips around Borneo and specimens kept at the zoological museum of Universiti Malaysia Sarawak were examined. A total of 27 characters using dental, skull and external body measurements were recorded. Clustering analysis illustrated the grouping and morphometric relationships between the species of this genus. It has clearly separated each species from each other despite the overlapping of measurements of some species within the genus. Cluster analysis provides an alternative approach to make a preliminary identification of a species.

  14. Simultaneous expression of abiotic stress responsive transcription factors, AtDREB2A, AtHB7 and AtABF3 improves salinity and drought tolerance in peanut (Arachis hypogaea L..

    Directory of Open Access Journals (Sweden)

    Vittal Pruthvi

    Full Text Available Drought, salinity and extreme temperatures are the most common abiotic stresses, adversely affecting plant growth and productivity. Exposure of plants to stress activates stress signalling pathways that induce biochemical and physiological changes essential for stress acclimation. Stress tolerance is governed by multiple traits, and importance of a few traits in imparting tolerance has been demonstrated. Under drought, traits linked to water mining and water conservation, water use efficiency and cellular tolerance (CT to desiccation are considered to be relevant. In this study, an attempt has been made to improve CT in drought hardy crop, peanut (Arachis hypogaea L., cv. TMV2 by co-expressing stress-responsive transcription factors (TFs, AtDREB2A, AtHB7 and AtABF3, associated with downstream gene expression. Transgenic plants simultaneously expressing these TFs showed increased tolerance to drought, salinity and oxidative stresses compared to wild type, with an increase in total plant biomass. The transgenic plants exhibited improved membrane and chlorophyll stability due to enhanced reactive oxygen species scavenging and osmotic adjustment by proline synthesis under stress. The improvement in stress tolerance in transgenic lines were associated with induced expression of various CT related genes like AhGlutaredoxin, AhAldehyde reductase, AhSerine threonine kinase like protein, AhRbx1, AhProline amino peptidase, AhHSP70, AhDIP and AhLea4. Taken together the results indicate that co-expression of stress responsive TFs can activate multiple CT pathways, and this strategy can be employed to improve abiotic stress tolerance in crop plants.

  15. Phytochemistry and Pharmacology of the Genus Tovomita.

    Science.gov (United States)

    Epifano, Francesco; Specchiulli, Maria Carmela; Taddeo, Vito Alessandro; Fiorito, Serena; Genovese, Salvatore

    2015-06-01

    The genus Tovomita (Fam. Clusiaceae) comprises 45 species mainly found in tropical regions of Central and South America. Most of the species of the title genus have been used for centuries as natural remedies. Phytochemicals isolated from Tovomita spp. include prenylated and unprenylated benzophenones and xanthones. The aim of this review is to examine in detail from a phytochemical and pharmacological point of view what is reported in the past and current literature about the properties of phytopreparations and individual active principles obtained from plants belonging to the Tovomita genus.

  16. Keanekaragaman metabolit sekunder Genus Artocarpus (Moraceae

    Directory of Open Access Journals (Sweden)

    ALIEFMAN HAKIM

    2011-11-01

    Full Text Available Hakim A. 2011. Keanekaragaman metabolit sekunder Genus Artocarpus (Moraceae. Bioteknologi 8: 86-98. Beberaapa spesies dari genus Artocarpus (Moraceae telah diteliti kandungan bahan alamnya. Metabolit sekunder yang berhasil diisolasi dari genus Artocarpus terdiri dari terpenoid, flavonoid, stilbenoid, arilbenzofuran, neolignan, dan adduct Diels-Alder. Kelompok flavonoid merupakan senyawa yang paling banyak ditemukan dari tumbuhan Artocarpus. Senyawa flavonoid yang telah berhasil diisolasi dari tumbuhan Artocarpus memiliki kerangka yang beragam seperti calkon, flavanon, flavan-3-ol, flavon sederhana, prenilflavon, oksepinoflavon, piranoflavon, dihidrobenzosanton, furanodi hidrobenzosanton, piranodihidrobenzosanton, kuinonosanton, siklolopentenosanton, santonolid, dihidrosanton.

  17. Beta genus papillomaviruses and skin cancer.

    Science.gov (United States)

    Howley, Peter M; Pfister, Herbert J

    2015-05-01

    A role for the beta genus HPVs in keratinocyte carcinoma (KC) remains to be established. In this article we examine the potential role of the beta HPVs in cancer revealed by the epidemiology associating these viruses with KC and supported by oncogenic properties of the beta HPV proteins. Unlike the cancer associated alpha genus HPVs, in which transcriptionally active viral genomes are invariably found associated with the cancers, that is not the case for the beta genus HPVs and keratinocyte carcinomas. Thus a role for the beta HPVs in KC would necessarily be in the carcinogenesis initiation and not in the maintenance of the tumor. Copyright © 2015 Elsevier Inc. All rights reserved.

  18. The genus of a type of graph

    Institute of Scientific and Technical Information of China (English)

    2010-01-01

    Based on the joint tree model introduced by Liu, the genera of further types of graphs not necessary to have certain symmetry can be obtained. In this paper, we obtain the genus of a new type of graph with weak symmetry. As a corollary, the genus of complete tripartite graph K n,n,l (l≥n≥2) is also derived. The method used here is more direct than those methods, such as current graph, used to calculate the genus of a graph and can be realized in polynomial time.

  19. Intensity of Ground Cover Crop Arachis pintoi, Rhizobium Inoculation and Phosphorus Application and Their Effects on Field Growth and Nutrient Status of Cocoa Plants

    Directory of Open Access Journals (Sweden)

    John Bako Baon

    2006-08-01

    Full Text Available Arachis pintoiis potentially as a cover crop for cocoa (Theobroma cacaoL. farm, however information regarding its effect on the growth of cocoa plants in the field is very limited. The objective of this experiment is to investigate the combined influence of ground cover crop A. pintoi, rhizobial bacterial inoculation and phosphorus (P fertilizer on the growth of cocoa in the field and nutrient status. This experiment laid out in split-split plot design consisted of three levels of cover crop (without, A. pintoiand Calopogonium caeruleum, two levels of rhizobium inoculation (not inoculated and inoculated and two levels of phosphorus application (no P added and P added. The results showed that in field condition the presence of A. pintoias cover crop did not affect the growth of cocoa. On the other hand, C. caeruleumas cover crop tended to restrict cocoa growth compared to A. pintoi. Application of P increased leaf number of cocoa plant. Biomass production of A. pintoiwas 40% higher than C. caeruleum. Soil organic carbon and nitrogen contents were not affected by ground cover crops, though higher value (0.235% N and 1.63% organic C was obtained from combined treatments of inoculation and P addition or neither inoculation nor P addition. In the case of no rhizobium inoculation, soil N content in cocoa farm with A. pintoicover crop was lower than that of without cover crop or with C. caeruleum. Cover crop increased plant N content when there was no inoculation, on the other hand rhizobium inoculation decreased N content of cocoa tissue. Tissue P content of cocoa plant was not influenced by A. Pintoicover crop or by rhizobium inoculation, except that the P tissue content of cocoa was 28% higher when the cover crop was C. caeruleumand inoculated. Key words : Arachis pintoi, Theobroma cacao, Calopogonium caeruleum, rhizobium, nitrogen, phosphorus.

  20. Taxonomic review of the genus Zeiraphera Treitschke (Lepidoptera: Tortricidae) in Korea, with description of a new species

    OpenAIRE

    Sat-Byul Shin; Bong-Kyu Byun

    2016-01-01

    This study was carried out to review the genus Zeiraphera in Korea. In this study, a total of eight species of the genus Zeiraphera, belonging to the tribe Eucosmini, were recognized from Korea, with description of a new species, Zeiraphera subvirinea sp. nov. The wing patterns, and male and female genitalic structures for the known species of the genus are examined and redescribed. Key for the species is given. Known food plants and life histories, when available, were reviewed and listed.

  1. Synaptospory in the fern genus Pyrrosia (Polypodiaceae)

    NARCIS (Netherlands)

    Uffelen, van Gerda A.

    1985-01-01

    The correlation between sporoderm sculpture and life form of the sporophyte as postulated by Kramer (1977) is investigated for the fern genus Pyrrosia. This correlation is not found in Pyrrosia but may be present in other fern groups.

  2. Synaptospory in the fern genus Pyrrosia (Polypodiaceae)

    NARCIS (Netherlands)

    Uffelen, van Gerda A.

    1983-01-01

    The correlation between sporoderm sculpture and life form of the sporophyte as postulated by Kramer (1977) is investigated for the fern genus Pyrrosia. This correlation is not found in Pyrrosia but may be present in other fern groups.

  3. Monograph of the genus Phylacium (Leguminosae)

    NARCIS (Netherlands)

    Bresser, Mirjam

    1978-01-01

    In the genus Phylacium 2 species are recognized. Special attention is paid to the morphology of the inflorescence; full descriptions are given with plates and a map, showing the distribution of both species.

  4. Taxonomic revision of the genus Acanthephippium (Orchidaceae)

    NARCIS (Netherlands)

    Thomas, S.A.

    1997-01-01

    This is a revision of the genus Acanthephippium Blume. Eleven species are recognised. Seven names are here for the first time reduced to synonymy (A. lycaste, A. odoratum, A. papuanum, A. pictum, A. simplex, A. sinense, and A. thailandicum).

  5. The genus Psiadia: Review of traditional uses, phytochemistry and pharmacology.

    Science.gov (United States)

    Mahadeo, Keshika; Grondin, Isabelle; Kodja, Hippolyte; Soulange Govinden, Joyce; Jhaumeer Laulloo, Sabina; Frederich, Michel; Gauvin-Bialecki, Anne

    2017-08-24

    The genus Psiadia Jacq. ex. Willd. belongs to the Asteraceae family and includes more than 60 species. This genus grows in tropical and subtropical regions, being especially well represented in Madagascar and the Mascarene Islands (La Réunion, Mauritius and Rodrigues). Several Psiadia species have been used traditionally for their medicinal properties in Africa and the Mascarene Islands. Based on traditional knowledge, various phytochemical and pharmacological studies have been conducted. However there are no recent papers that provide an overview of the medicinal potential of Psiadia species. Therefore, the aim of this review is to provide a comprehensive summary of the botany, phytochemistry and pharmacology of Psiadia and to highlight the gaps in our knowledge for future research opportunities. The available information on traditional uses, phytochemistry and biological activities of the genus Psiadia was collected from scientific databases through a search using the keyword 'Psiadia' in 'Google Scholar', 'Pubmed', 'Sciencedirect', 'SpringerLink', 'Web of Science', 'Wiley' and 'Scifinder'. Additionally, published books and unpublished Ph.D. and MSc. dissertations were consulted for botanical information and chemical composition. Historically, species of the genus Psiadia have been used to treat a wide range of ailments including abdominal pains, colds, fevers, bronchitis, asthma, rheumatoid arthritis, skin infections and liver disorders among others. Phytochemical works led to the isolation of flavonoids, phenylpropanoids, coumarins and terpenoids. Furthermore, phytochemical compositions of the essential oils of some species have been evaluated. Crude extracts, essential oils and isolated molecules showed in vitro pharmacological activities, such as antimicrobial, anti-viral, anti-inflammatory, antiplasmodial and antileishmanial activities. Crude extracts of Psiadia dentata and Psiadia arguta have specifically been found to be potentially useful for inhibition

  6. A SYSTEMATIC STUDY OF THE GENUS DEPRESSARIA HAWORTH, 1811 FROM CHINA(LEPIDOPTERA : DEPRESSARIIDAE)%中国宽蛾属分类学研究(鳞翅目:宽蛾科)

    Institute of Scientific and Technical Information of China (English)

    王淑霞; 李后魂

    2002-01-01

    The genus Depressaria Haworth from China is systematically studied in the present paper. Of the eightspecies reported here, three species (D. sheni Wang et Li, sp. nov. , D. valida Wang et Li, sp. nov. and D.varivalvata Wang et Li, sp. nov. ) are described as new to science and three species (D. kostjuki Lvovsky, D.golovushkini Lvovsky and D. artemisiae Nickerl) are recorded for the first time from China. The genital struc-tures of the new species and the new record species are figued. Key to the known Chinese species is given.%本文记述中国宽蛾属昆虫8种,其中包括3新种和3中国新记录种.并绘制了新种和新记录种的外生殖器特征图,编制了分种检索表.模式标本保存在南开大学生物学系.

  7. Flavor of roasted peanuts (Arachis hypogaea) - Part II: Correlation of volatile compounds to sensory characteristics

    NARCIS (Netherlands)

    Lykomitros, Dimitrios; Fogliano, Vincenzo; Capuano, Edoardo

    2016-01-01

    Flavor and color of roasted peanuts are important research areas due to their significant influence on consumer preference. The aim of the present study was to explore correlations between sensory attributes of peanuts, volatile headspace compounds and color parameters. Different raw peanuts were se

  8. Target enrichment sequencing in cultivated peanut (Arachis hypogaea L.) using probes designed from transcript sequences.

    Science.gov (United States)

    Peng, Ze; Fan, Wen; Wang, Liping; Paudel, Dev; Leventini, Dante; Tillman, Barry L; Wang, Jianping

    2017-05-10

    Enabled by the next generation sequencing, target enrichment sequencing (TES) is a powerful method to enrich genomic regions of interest and to identify sequence variations. The objective of this study was to explore the feasibility of probe design from transcript sequences for TES application in calling sequence variants in peanut, an important allotetraploid crop with a large genome size. In this study, we applied an in-solution hybridization method to enrich DNA sequences of seven peanut genotypes. Our results showed that it is feasible to apply TES with probes designed from transcript sequences in polyploid peanut. Using a set of 31,123 probes, a total of 5131 and 7521 genes were targeted in peanut A and B genomes, respectively. For each genotype used in this study, the probe target capture regions were efficiently covered with high depth. The average on-target rate of sequencing reads was 42.47%, with a significant amount of off-target reads coming from genomic regions homologous to target regions. In this study, when given predefined genomic regions of interest and the same amount of sequencing data, TES provided the highest coverage of target regions when compared to whole genome sequencing, RNA sequencing, and genotyping by sequencing. Single nucleotide polymorphism (SNP) calling and subsequent validation revealed a high validation rate (85.71%) of homozygous SNPs, providing valuable markers for peanut genotyping. This study demonstrated the success of applying TES for SNP identification in peanut, which shall provide valuable suggestions for TES application in other non-model species without a genome reference available.

  9. The variability of phenol compounds based on karyological studies of taxa of the genus Vaccinium L., subgenus Oxycoccus (Hill A. Gray

    Directory of Open Access Journals (Sweden)

    Wanda Gugnacka-Fiedor

    2014-01-01

    Full Text Available 52 population samples from Poland and several European countries were subjected to karyological and chemotaxonomic studies. Two diploid species (Vaccinium macrocarpon Ait. and V. microcarpum (Turcz, ex Rupr. Schmalh. with chromosome number 2n = 24 were found, differing essentially in the chemical composition of their phenol fractions. Besides diploid species, a tetraploid V. oxycoccos L., with the chromosome number 2n = 48 was distinguished. It is, characterized by a high chemical variability. Its chromatograms show spots of compounds characteristic of both subspecies distinguished. No hexaploid V. hagerupii (Löve et Löve Rothm. with chromosome number 2n = 72 was in the karyologically studied material. Chemical studies of a herbarium sample do not confirm the distinctness of this taxon in relation to V. oxycoccos. The karyological studies, which, however, need replication, have also revealed the presence of a presumed hybrid, V. pseudonanum Keller, with chromosome number 2n = 36. The chromatogram of that taxon is very similar to that of V. oxycoccos L. subsp. microphyllus (Lange Löve et Löve.

  10. Studies on Tropical Pholcidae I Panjange, a new genus of Indo-Australian Leaf- and rock-dwelling Pholcid spiders (Araneae)

    NARCIS (Netherlands)

    Deeleman-Reinhold, C.L.; Deeleman, P.R.

    1983-01-01

    The study of tropical spiders was taken up in the last part of the nineteenth century by Thorell, Simon and others, but since then passed through a long dormant stage. Only during the last few decades there was some revival. In particular numerous spider species from leaf-litter, ground debris, etc.

  11. Cosmetic crossings of genus one knots

    CERN Document Server

    Balm, Cheryl

    2011-01-01

    We show that for genus one knots the Alexander polynomial and the homology of the double cover branching over the knot provide obstructions to cosmetic crossings. As an application we prove the nugatory crossing conjecture for the negatively twisted, positive Whitehead doubles of all knots. We also verify the conjecture for several families of pretzel knots and all genus one knots with up to 10 crossings.

  12. Kops genus - en værkstedsrapport

    DEFF Research Database (Denmark)

    Gudiksen, Asgerd

    2008-01-01

     Inden for Ømålsområdet optræder ordet kop både i genus femininum, masku­linum og neutrum. På Sjælland, hvor trekønssystemet er under af­vikling, kan ordet desuden være genus commune. Der kan konstateres en vis dialektgeografisk fordeling af de tre (fire) genera, men især på Sjælland er...

  13. Taxonomic novelties in the genus Campylospermum (Ochnaceae)

    OpenAIRE

    Bissiengou, P.; Chatrou, L.W.; Wieringa, J. J.; Sosef, M.S.M.

    2013-01-01

    Four new species, one with two subspecies, of the genus Campylospermum are described, all endemic or sub-endemic to Gabon. These are C. auriculatum, C. gabonensis, C. gabonensis subsp. australis, C. glaucifolium and C. occidentalis. Distribution maps and scans of the holotypes are provided as well as preliminary IUCN Red List assessments. New combinations for nine species formerly assigned to the genus Ouratea and/or Gomphia are proposed: C. andongensis, C. glomeratum, C. longestipulatum, C. ...

  14. Compatibility of Azospirillum brasilense and Pseudomonas fluorescens in growth promotion of groundnut ( Arachis hypogea L.

    Directory of Open Access Journals (Sweden)

    ANDHARE A. PRASAD

    Full Text Available ABSTRACT We attempted to study the compatibility among plant beneficial bacteria in the culture level by growing them near in the nutrient agar plates. Among all the bacteria tested, Rhizobium was found to inhibit the growth of other bacteria. From the compatible group of PGPR, we have selected one biofertilizer (Azospirillum brasilense strain TNAU and one biocontrol agent (Pseudomonas fluorescens strain PF1 for further studies in the pot culture. We have also developed a bioformulation which is talc powder based, for individual bacteria and mixed culture. This formulation was used as seed treatment, soil application, seedling root dip and foliar spray in groundnut crop in vitro germination conditions. A. brasilense was found to enhance the tap root growth and P. fluorescens, the lateral root growth. The other growth parameters like shoot growth, number of leaves were enhanced by the combination of both of the bacteria than their individual formulations. Among the method of application tested in our study, soil application was found to be the best in yielding better results of plant growth promotion.

  15. Molecular systematics of the enigmatic Middle American genus Vieja (Teleostei: Cichlidae).

    Science.gov (United States)

    McMahan, Caleb D; Geheber, Aaron D; Piller, Kyle R

    2010-12-01

    The genus Vieja represents a group of heroine cichlids (Teleostei: Cichlidae) distributed on the Atlantic and Pacific slopes of North and Central America from southern Mexico to Panama. Sixteen species of Vieja are presently recognized; however, based on long-standing taxonomic problems, the genus itself appears to be weakly defined. A number of different generic designations have been proposed for members of Vieja, and recent systematic studies of heroine cichlids have not specifically addressed the validity of the grouping and have not included all species in the genus. Therefore, the purpose of this study was to assess the monophyly of the genus Vieja by including all nominal species in the genus using the mitochondrial encoded cytochrome b gene and nuclear S7-1 intron. Results of Maximum Parsimony, Bayesian inference, and topology tests (constraint tree searches and post-burn-in Bayesian filtering) indicate that the genus is not monophyletic as it is currently recognized. The genus Herichthys was recovered as sister to a clade consisting of a number of Vieja species (V. fenestrata, V. guttulata, V. zonata, V. hartwegi, V. bifasciata, V. breidohri, V. argentea, V. regani, V. melanura, V. synspila, and V. maculicauda, as well as Paraneetroplusbulleri). A clade consisting of V. intermedia, V. godmanni, and V. microphthalma was recovered sister to Theraps. Additionally, V. heterospila and V. tuyrensis were recovered outside of Vieja and Herichthys clades. Based on the results of this comprehensive study, we suggest a revised classification of Vieja species.

  16. The genus Allium--Part 1.

    Science.gov (United States)

    Fenwick, G R; Hanley, A B

    1985-01-01

    Alliums have been grown for many centuries for their characteristic, pungent flavor and medicinal properties. The present review, which includes references published up to the middle of 1984, is primarily concerned with the chemical composition, flavor, and physiological properties of these crops, their extracts, and processed products. Special emphasis is placed upon the relationship between the organoleptically and biologically active components of onion and garlic. Following a brief historical introduction, current production of commercially important alliums is described and their botanical origins and interrelationships are explained. Following consideration of the major economic diseases and pests of alliums, the agronomic, husbandry, and practices associated with their cultivation are described, particular emphasis being placed upon the storage and processing of onion and garlic. The detailed, overall chemical composition and nutritional value of members of the genus Allium are presented in Section 7; after an outline of the origin and nature of flavor components and precursors, the flavor volatiles of individual members are presented. The effects of agronomic, environmental, and processing practices on chemical and flavor content and quality are considered in Section 9. The following section deals critically with the human and animal studies which have been conducted into the medical and therapeutic properties of alliums, emphasis being placed upon the studies into the antiatherosclerotic effect of onion and garlic and their essential oils. After a study of antimicrobial properties of alliums and their effects on insects and animals, an overview is presented which highlights unexplored or inadequately studied areas and suggests rewarding areas for future research.

  17. Molecular Detection of Aflatoxin Producing Strains of Aspergillus Flavus from Peanut (Arachis Hypogaea

    Directory of Open Access Journals (Sweden)

    Adeela Hussain

    2015-02-01

    Full Text Available Aflatoxins are the potential carcinogens produced as secondary metabolites by Aspergillus flavus. They have the ability to contaminate large number of food which ultimately affect the human population. Malt extract agar was selected for the growth of control stains of fungus. The aim of the study was to develop a reliable and quick method for the detection of aflatoxin producing strains in peanuts by using molecular approaches. Total 80 samples of infected peanuts were collected from four different cities of Punjab and checked for their aflatoxin contamination. For aflatoxin detection, three target genes nor1, ver1 and aflR were selected which was involved in the aflatoxin biosynthesis. In all examined cases, 24 out of 80 (30% samples successfully amplified all three genes indicating aflatoxigenic activity. Discrimination between aflatoxigenic and non-aflatoxigenic strains were also determined on the basis of amplification of these three target DNA fragments. In this study, it was also demonstrated that only specific strains were able to produce the aflatoxin contamination in peanuts.

  18. Aspergillus and aflatoxin in groundnut (Arachis hypogaea L.) and groundnut cake in Eastern Ethiopia.

    Science.gov (United States)

    Mohammed, Abdi; Chala, Alemayehu; Dejene, Mashilla; Fininsa, Chemeda; Hoisington, David A; Sobolev, Victor S; Arias, Renee S

    2016-12-01

    This study was conducted to assess major Aspergillus species and aflatoxins associated with groundnut seeds and cake in Eastern Ethiopia and evaluate growers' management practices. A total of 160 groundnut seed samples from farmers' stores and 50 groundnut cake samples from cafe and restaurants were collected. Fungal isolation was done from groundnut seed samples. Aspergillus flavus was the dominant species followed by Aspergillus parasiticus. Aflatoxin analyses of groundnut seed samples were performed using ultra performance liquid chromatography; 22.5% and 41.3% of samples were positive, with total aflatoxin concentrations of 786 and 3135 ng g(-1) from 2013/2014 and 2014/2015 samples, respectively. The level of specific aflatoxin concentration varied between 0.1 and 2526 ng g(-1) for B2 and B1, respectively. Among contaminated samples of groundnut cake, 68% exhibited aflatoxin concentration below 20 ng g(-1), while as high as 158 ng g(-1) aflatoxin B1 was recorded. The study confirms high contamination of groundnut products in East Ethiopia.

  19. Studies in the liverwort genus Fossombronia (Metzgeriales from southern Africa. 9. A new species from Mpumalanga and KwaZulu-Natal, with notes on other species

    Directory of Open Access Journals (Sweden)

    S. M. Perold

    1999-12-01

    Full Text Available A new species of Fossombronia,  F. renateae, from Mpumalanga and KwaZulu-Natal in southern Africa is described. It is distinguished by its reflexed, undulating leaves and often stipitate pseudoperianth with a highly convoluted mouth, as well as by completely or incompletely reticulate spores and usually by short, blunt elaters with two spirals which often form rings or coils. Notes are provided on two unnamed species from Mpumalanga which cannot be fully described as yet, since ripe spores are not available for study. Brief references are made to some tropical African species.

  20. The genus Rhodosporidium: a potential source of beta-carotene.

    Science.gov (United States)

    de Miguel, T; Calo, P; Díaz, A; Villa, T G

    1997-03-01

    Four wild-type species of the genus Rhodosporidium have been studied as as possible sources for the industrial production of beta-carotene. HPLC-based studies showed that their carotenoid composition consisted of almost pure beta-carotene at concentrations ranging from 226 to 685 micrograms/g of dried yeast biomass. These results are consistent with those obtained by spectrophotometry at 480 nm.

  1. Butterfly pollination in Pteroglossa (Orchidaceae, Orchidoideae): a comparative study on the reproductive biology of two species of a Neotropical genus of Spiranthinae.

    Science.gov (United States)

    Pansarin, Emerson R; Ferreira, Alessandro W C

    2015-05-01

    Spiranthinae orchids are known for being self-compatible and offering nectar as a reward. Although data on their pollinators are scarce, members of this tribe are mostly pollinated by bees, hummingbirds and moths. Some of them even reproduce through facultative self-pollination. Nothing is known about the pollinators and reproduction system in Pteroglossa. Based on records on flowering phenology, floral morphology, reward production, pollinators and breeding system, this paper aims to study the reproductive biology of two Pteroglossa spp. Both species offer nectar as a resource and are pollinated exclusively by diurnal Lepidoptera at the studied areas. Nectar is produced by two glandular nectaries, and is stored in a spur. Pollinaria possess a ventrally adhesive viscidium that is deposited on the basal portion of butterfly proboscides. Both species are self-compatible but pollinator-dependent. The reproductive success is low when compared to other Spiranthinae. Although no evident mechanical barrier to avoid self-pollination or geitonogamy was identified, the erratic behavior of the butterflies, with their infrequent visits to only one flower per inflorescence, contributes to an increased fruit set produced through cross-pollination. The presence of ventrally adhesive viscidia in Spiranthinae is responsible for greater pollinator diversity when compared to bee-pollinated Goodyerinae with dorsally adhesive viscidia, adapted to attach to bee mouthparts.

  2. Isolation and expression analysis of LEA genes in peanut (Arachis hypogaea L.)

    Indian Academy of Sciences (India)

    Lei Su; Chuan-Zhi Zhao; Yu-Ping Bi; Shu-Bo Wan; Han Xia; Xing-Jun Wang

    2011-06-01

    Late embryogenesis abundant (LEA) protein family is a large protein family that includes proteins accumulated at late stages of seed development or in vegetative tissues in response to drought, salinity, cold stress and exogenous application of abscisic acid. In order to isolate peanut genes, an expressed sequence tag (EST) sequencing project was carried out using a peanut seed cDNA library. From 6258 ESTs, 19 LEA-encoding genes were identified and could be classified into eight distinct groups. Expression of these genes in seeds at different developmental stages and in various peanut tissues was analysed by semi-quantitative RT-PCR. The results showed that expression levels of LEA genes were generally high in seeds. Some LEA protein genes were expressed at a high level in non-seed tissues such as root, stem, leaf, flower and gynophore. These results provided valuable information for the functional and regulatory studies on peanut LEA genes.

  3. A revision of the fossil genus Miocepphus and other Miocene Alcidae (Aves: Charadriiformes) of the Western North Atlantic Ocean

    OpenAIRE

    Wijnker, T.G.; Olson, S. L.

    2009-01-01

    This study reviews and describes all known fossils of Alcidae from the Miocene of the western North Atlantic. Because the majority of alcid fossils recovered from Miocene sediments are allied with the genus Miocepphus Wetmore, 1940, the genus is revised here. Three new species of Miocepphus are described: Miocepphus bohaskai and Miocepphus blowi from the Early to Late Miocene, and Miocepphus mergulellus of uncertain Neogene age but probably Miocene. A new genus and species, Pseudocepphus tere...

  4. Ground Arthropod Attacks on Groundnut Arachis hypogaea L in Burkina Faso

    Directory of Open Access Journals (Sweden)

    Dicko, IO.

    1999-01-01

    Full Text Available Studies were conducted in five districts of Burkina Faso, West Africa from November to December, 1996. The objectives aimed at establishing spatial distribution and quantifying the level of damages on peanut pods by soil arthropods, termites and millepedes. Twenty seven samples of 100 pods each were taken from farmers' stocks in each district, which made a total of 135 pod samples examined. Damage was determined in each district by counting scarified pods by termites and perforated pods by millepedes and converting obtained numbers in percents. Results show that termites and millepedes cause damages throughout the five districts, with termites causing damages, as high as 30-40 % in some districts, compared to damages caused by millepedes which rarely exceeded 3 %. While damage degrees by termites were found to vary with districts, distribution of millepede damages was fairly uniform throughout the study area. The observed differential distribution of termite damages is thought to be due to farmers growing susceptible varieties in eastern districts, varieties such as Te3, proven to be highly susceptible to termites. Neither peanut pod weight, nor grain weight was significantly correlated with damages by termites and millepedes. However, it is highly likely that damages by the two soil arthropods increase grain contamination by the known carcinogenic substance, aflatoxin, by allowing pod penetration and grain invasion by the aflatoxin-producing fungus, Aspergillus sp. This suggests that there is an urgent need for efficient control methods to be developed and applied, not only to reduce peanut yield loss, but also to help preserve human health. One of these methods could be the use by local farmers of resistant varieties which have been shown by several authors to be efficient against termites and millepedes. Such varieties include Ncac 2243 and Ncac 343.

  5. Development and Utilization of InDel Markers to Identify Peanut (Arachis hypogaea Disease Resistance

    Directory of Open Access Journals (Sweden)

    Lifeng eLiu

    2015-11-01

    Full Text Available Peanut diseases, such as leaf spot and spotted wilt caused by Tomato Spotted Wilt Virus, can significantly reduce yield and quality. Application of marker assisted plant breeding requires the development and validation of different types of DNA molecular markers. Nearly 10,000 SSR-based molecular markers have been identified by various research groups around the world, but less than 14.5% showed polymorphism in peanut and only 6.4% have been mapped. Low levels of polymorphism limit the application of marker assisted selection (MAS in peanut breeding programs. Insertion/deletion (InDel markers have been reported to be more polymorphic than SSRs in some crops. The goals of this study were to identify novel InDel markers and to evaluate the potential use in peanut breeding. Forty-eight InDel markers were developed from conserved sequences of functional genes and tested in a diverse panel of 118 accessions covering six botanical types of cultivated peanut, of which 104 were from the U.S. mini-core. Results showed that 16 InDel markers were polymorphic with polymorphic information content (PIC among InDels ranged from 0.017 to 0.660. With respect to botanical types, PICs varied from 0.176 for fastigiata var., 0.181 for hypogaea var., 0.306 for vulgaris var., 0.534 for aequatoriana var., 0.556 for peruviana var., to 0.660 for hirsuta var., implying that aequatoriana var., peruviana var., and hirsuta var. have higher genetic diversity than the other types and provide a basis for gene functional studies. Single marker analysis was conducted to associate specific marker to disease resistant traits. Five InDels from functional genes were identified to be significantly correlated to tomato spotted wilt virus (TSWV infection and leaf spot, and these novel markers will be utilized to identify disease resistant genotype in breeding populations.

  6. An isoenzyme study in the genus Lotus (Fabaceae) : Segregation of isoenzyme alleles in synthetic allo- and autotetraploids, and in L. corniculatus.

    Science.gov (United States)

    Raelson, J V; Lemaître, P C; Starkie, K M; Grant, W F

    1989-03-01

    Segregation of the cytosolic Pgi2 locus was studied among progeny of the synthetic allotetraploid (L. japonicus × L. alpinus)(2), the synthetic autotetraploid (L. alpinus)(2), and the cultivated tetraploid species L. corniculatus L. Evidence of an original diploid duplication found within the interspecific hybrid L. japonicus × L. alpinus was also found within the synthetic allotetraploid (quadruplication of loci). Evidence suggesting quadruplication of loci was also found in the tetraploid L. corniculatus, but not in the synthetic autotetraploid (L. alpinus)(2). It is suggested that the original duplication resulted from unequal crossing-over between homoeologues and that it provides evidence that L. corniculatus is a segmental allotetraploid. Quadruplication of loci in L. corniculatus could explain previously reported distorted tetrasomic ratios for segregation of qualitative characters in this species.

  7. Taxonomic studies of the Lygephila lubrica (Freyer, 1842 species complex with notes on other species in the genus (Lepidoptera, Erebidae, Toxocampinae

    Directory of Open Access Journals (Sweden)

    Oleg Pekarsky

    2014-11-01

    Full Text Available The taxa of the Lygephila lubrica (Freyer, 1846 species complex are revised. The genital features of all known taxa are described and illustrated, with special reference to the structure of the vesica. Genitalia of L. lubrica from different places in Russia, Central Asia and China are studied, illustrated and compared with different Mongolian populations. L. kazachkaratavika, described as a subspecies, is raised to a species level, stat. n. Neotypes of Lygephila lubrosa (Staudinger, 1901, L. lubrosa kazachkaratavika Stshetkin YuL & Stshetkin YuYu, 1994 [1997] and L. lubrosa orbonaria Stshetkin YuL & Stshetkin YuYu, 1994 [1997] are designated. The female genitalia of the type of L. lupina (Graeser, 1890 is described and illustrated for the first time, and L. mirabilis (Bryk, 1948 treated here as a junior subjective synonym, syn. n.

  8. Extraction, Purification and Primary Characterization of Polysaccharides from Defatted Peanut (Arachis hypogaea Cakes

    Directory of Open Access Journals (Sweden)

    Hongzhi Liu

    2016-06-01

    Full Text Available The hot-water extraction, purification and characterization of polysaccharides from defatted peanut cake (PPC were investigated in this study. A Box-Behnken factorial design (BBD was used to investigate the effects of three independent variables, namely extraction temperature (X1, extraction time (X2 and ratio of water to raw material (X3. The optimum conditions were 85 °C, 3 h and 20:1 (mL/g respectively. Regression analysis was done to reveal the experimental results which include 34.97% extraction rate while the value verified under these conditions was 34.49%. The crude PPC was sequentially further purified by Sephadex G-100 chromatography, and one purified fraction was obtained. The PPC purified fraction was characterized by FT-IR, HPAEC; SEC-MALLS. The average molecular weight of the PPC purified fraction was 2.383 × 105 Da. The polysaccharide was mainly composed of glucose, galactose, arabinose and xylose. The PPC have the typical absorption of polysaccharide.

  9. Identification and characterization of a gene encoding a putative lysophosphatidyl acyltransferase from Arachis hypogaea

    Indian Academy of Sciences (India)

    Si-Long Chen; Jia-Quan Huang; Lei Yong; Yue-Ting Zhang; Xiao-Ping Ren; Yu-Ning Chen; Hui-Fang Jiang; Li-Ying Yan; Yu-Rong Li; Bo-Shou Liao

    2012-12-01

    Lysophosphatidyl acyltransferase (LPAT) is the important enzyme responsible for the acylation of lysophosphatidic acid (LPA), leading to the generation of phosphatidic acid (PA) in plant. Its encoding gene is an essential candidate for oil crops to improve oil composition and increase seed oil content through genetic engineering. In this study, a full-length AhLPAT4 gene was isolated via cDNA library screening and rapid amplification of cDNA ends (RACE); our data demonstrated that AhLPAT4 had 1631 nucleotides, encoding a putative 43.8 kDa protein with 383 amino acid residues. The deduced protein included a conserved acyltransferase domain and four motifs (I–IV) with putative LPA and acyl-CoA catalytic and binding sites. Bioinformatic analysis indicated that AhLPAT4 contained four transmembrane domains (TMDs), localized to the endoplasmic reticulum (ER) membrane; detailed analysis indicated that motif I and motifs II–III in AhLPAT4 were separated by the third TMD, which located on cytosolic and ER luminal side respectively, and hydrophobic residues on the surface of AhLPAT4 protein fold to form a hydrophobic tunnel to accommodate the acyl chain. Subcellular localization analysis confirmed that AhLPAT4 was a cytoplasm protein. Phylogenetic analysis revealed that AhLPAT4 had a high homology (63.7–78.3%) with putative LPAT4 proteins from Glycine max, Arabidopsis thaliana and Ricinus communis. AhLPAT4 was ubiquitously expressed in diverse tissues except in flower, which is almost undetectable. The expression analysis in different developmental stages in peanut seeds indicated that AhLPAT4 did not coincide with oil accumulation.

  10. Influence of Bradyrhizobium Strains on Peanut Advanced Breeding Lines (Arachis hypogaea L. Yield in North Cameroon

    Directory of Open Access Journals (Sweden)

    Ngueguim, M.

    2007-01-01

    Full Text Available Peanut yields may be reduced due to early season nitrogen deficiency. A study was conducted in 1994 and 1995 at two locations (Guiring and Guetale, the peanut belt of Cameroon, to investigate the use of Bradyrhizobium strains to improve the nitrogen use by selected peanut advanced breeding lines. Thirty treatments were arranged in a 5 x 6 factorial and grown in a randomized complete block with four replications in 1994 and three in 1995. The treatments were a factorial set of five peanuts lines tested with four introduced inoculants, one local strain and the nitrogen treatment. Results over locations and years showed significant differences among strains for plant stand and seed weight, and among peanut lines for all traits except days to flowering. Genotypes CGS- 269 (1.225 t/ha and CGS-1272 (1.032 t/ha had the best average yields for the locations tested. The strain x host interaction was significant for plant stand, pod length and pod yield. The environment x strain x host interaction was also significant for haulm yield. Strain NC92 (- (45.2 plants/7 m2 produced higher plant stands than nitrogen treatment (40.3 plants/7 m2 or indigenous strain (41 plants/7 m2, but was not significantly superior to other strains. Strain NC92 (+ performed poorly for seed weight. The combination of peanut line CGS-1272/NC-120 and CGS-383/NC92(+ produced the highest means for pod length (58.2 cm. Genotype CGS-269 with strain NC-120 produced the highest pod yield (1.483 t/ha. Although the strain x host interaction was not significant for haulm yield, there was a good performance of line CGS-1272 with 3G4B20 and NC92 (+ which outyielded the indigenous/CGS-1272 combination by 20.3% and 17.8%, respectively.

  11. ISSR Study on Genetic Relationship of Genus Paulownia%泡桐属植物亲缘关系的ISSR分析

    Institute of Scientific and Technical Information of China (English)

    莫文娟; 傅建敏; 乔杰; 雷莉莉; 李芳东; 袁德义; 邱乾栋

    2013-01-01

    利用ISSR分子标记对泡桐属21份种、变种及变型材料进行亲缘关系分析.结果表明:从100个ISSR引物中筛选出9个扩增产物电泳后带型清晰可辨的引物,共扩增出85条DNA片段,其中多态性带74条,多态位点百分率为87.05%,反映出泡桐属不同种质间遗传差异明显,其丰富的多态性与供试材料广泛的种质代表性有关;UPGMA法将研究材料分成毛泡桐组、白花泡桐组和川泡桐组3大组,地理分布较近的种质聚类在一起,表现出较密切的亲缘关系;在对兰考泡桐、山明泡桐、白花兰考泡桐、楸叶泡桐、圆冠泡桐、亮叶毛泡桐、毛泡桐、白花泡桐、川泡桐的亲缘关系分析及分类处理上,基本上与形态学、细胞学、同工酶的研究结果一致.最后对泡桐属的部分植物的分类问题进行讨论.同时发现部分泡桐的一些特异性条带,可以进一步转化为SCAR标记.%In this study, 21 species, varieties and forma in Paulownia were used to detect the genetic relationships by using inter-simple sequence repeats ( ISSR) markers. The results showed that; 1) A total of 85 DNA fragments were amplified using 9 out of 100 ISSR primers with unambiguous unique polymorphic bands, among which 74 DNA bands were polymorphic ( PPB =87. 05%), indicating significant genetic differentiation among Paulownia accessions tested; 2) The dendrogram was constructed with MEGA3. 1 statistical package using UPGMA (the unweighted pair-group method with arithmetic average) , with which Paulownia was roughly divided into three main groups of Paulownia tomentosa group, P. fortunei group and P. fargesii group. The Paulownia germplasms with close geographical distribution were clustered together, which illustrated there was a close relationship among them; 3) The findings of the relationship and classification were basically consistent with the morphology, cytology, isozyme study results among P. elongata, P. lamprophylla, P

  12. Study of morphological adaptation of genus Eothenomys (Murida e, Mannalia) in Yunnan province%云南省绒鼠属(Eothenomys)的形态适应研究

    Institute of Scientific and Technical Information of China (English)

    沐远; 朱万龙

    2015-01-01

    绒鼠属(Eothenomys)是亚洲横断山地区的特有类群。对分布于云南地区的昭通绒鼠(E.oliter)、玉龙绒鼠(E.proditor)、西南绒鼠(E.custos)、滇绒鼠(E.eleusis)、黑腹绒鼠(E.melanogaster)、大绒鼠(E.miletus)、克钦绒鼠( E.cachinus)和中华绒鼠( E.c hinensis)形态学数据进行了测量,利用判别分析、形态的系统发生等方法对其进行分析。结果表明云南横断山垂直分布的特点决定了海拔对绒鼠形态的影响比纬度更加明显,绒鼠中出现的不同表现型是其不同生活方式和对不同生境长期适应的结果,但在形态上滇绒鼠和黑腹绒鼠有重叠。%Eothenomys are small mammals inhabiting in Hengduan mountain regions .In the present study ,morphological examinations of E.oliter, E.proditor, E.custos, E.eleus is, E.melanogaster, E.miletus and E.cachinus from Yunnan were measured .Discrimi-nate analysis and phylogeny of morphology were used to analysis the ecological adaptations and group spread .Results showed that Eo-thneomys morphological divergence was prime importance in the interaction of the organism with its environment and life history , and the altitude was more important than latitude .Taxonomic differentiation was commonly associated with morphological divergence , ex-cept E.eleusis and E.melanogaster.

  13. Some aspects of the pollen morphology of the genus Sanguisorba L. (Rosaceae)

    NARCIS (Netherlands)

    Reitsma, Tj.

    1967-01-01

    Eight species of the genus Sanguisorba L. were studied. Two distinct types could be recognized, viz., the Sanguisorba minor and the Sanguisorba officinalis type. Sanguisorba filiformis (Hooker fil.) Handell-Mazzetti appeared to be a transition between these two types.

  14. Multilocus phylogenetic analysis of the genus Aeromonas.

    Science.gov (United States)

    Martinez-Murcia, Antonio J; Monera, Arturo; Saavedra, M Jose; Oncina, Remedios; Lopez-Alvarez, Monserrate; Lara, Erica; Figueras, M Jose

    2011-05-01

    A broad multilocus phylogenetic analysis (MLPA) of the representative diversity of a genus offers the opportunity to incorporate concatenated inter-species phylogenies into bacterial systematics. Recent analyses based on single housekeeping genes have provided coherent phylogenies of Aeromonas. However, to date, a multi-gene phylogenetic analysis has never been tackled. In the present study, the intra- and inter-species phylogenetic relationships of 115 strains representing all Aeromonas species described to date were investigated by MLPA. The study included the independent analysis of seven single gene fragments (gyrB, rpoD, recA, dnaJ, gyrA, dnaX, and atpD), and the tree resulting from the concatenated 4705 bp sequence. The phylogenies obtained were consistent with each other, and clustering agreed with the Aeromonas taxonomy recognized to date. The highest clustering robustness was found for the concatenated tree (i.e. all Aeromonas species split into 100% bootstrap clusters). Both possible chronometric distortions and poor resolution encountered when using single-gene analysis were buffered in the concatenated MLPA tree. However, reliable phylogenetic species delineation required an MLPA including several "bona fide" strains representing all described species.

  15. Relative symplectic caps, 4-genus and fibered knots

    Indian Academy of Sciences (India)

    Siddhartha Gadgil; Dheeraj Kulkarni

    2016-05-01

    We prove relative versions of the symplectic capping theorem and sufficiency of Giroux’s criterion for Stein fillability and use these to study the 4-genus of knots. More precisely, suppose we have a symplectic 4-manifold with convex boundary and a symplectic surface in such that is a transverse knot in . In this paper, we prove that there is a closed symplectic 4-manifold with a closed symplectic surface such that (, ) embeds into (, ) symplectically. As a consequence we obtain a relative version of the symplectic Thom conjecture. We also prove a relative version of the sufficiency part of Giroux’s criterion for Stein fillability, namely, we show that a fibered knot whose mondoromy is a product of positive Dehn twists bounds a symplectic surface in a Stein filling. We use this to study 4-genus of fibered knots in $\\mathbb S^3$. Further, we give a criterion for quasipositive fibered knots to be strongly quasipositive.

  16. Ancestral Area Analysis of the Genus Caragara (Leguminosae)

    Institute of Scientific and Technical Information of China (English)

    ZHANGMing-Li

    2004-01-01

    Caragana has a temperate Asian distribution. Based on the phylogeny and 13 distributionalareas of this genus, its ancestral area was studied via the ancestral area analysis suggested by Bremer(1992), Ronquist (1994) and Hausdorf (1997). The results indicate that three areas, Far East-NortheastChina, Altai-Sayan and North China-Qinling Mountains (Mts) are likely the ancestral areas. Linking to theviewpoints of the Holarctic origin for north temperate flora, Far East-Northeast China seems more likely tobe the ancestral area. According to the three ancestral areas isolated geographically and the analysis inthe present study, as well as former biogeographical analysis of this genus, it is suggested that Caraganaspeciation is mainly in the mode of vicariance rather than dispersal, and dispersed is often in shortdistance.

  17. Towards large genus asymtotics of intersection numbers on moduli spaces of curves

    CERN Document Server

    Mirzakhani, Maryam

    2011-01-01

    We explicitly compute the diverging factor in the large genus asymptotics of the Weil-Petersson volumes of the moduli spaces of $n$-pointed complex algebraic curves. Modulo a universal multiplicative constant we prove the existence of a complete asymptotic expansion of the Weil-Petersson volumes in the inverse powers of the genus with coefficients that are polynomials in $n$. This is done by analyzing various recursions for the more general intersection numbers of tautological classes, whose large genus asymptotic behavior is also extensively studied.

  18. A revision of the genus Muricea Lamouroux, 1821 (Anthozoa, Octocorallia) in the eastern Pacific. Part II.

    Science.gov (United States)

    Breedy, Odalisca; Guzman, Hector M

    2016-01-01

    The species of the genus Muricea were mainly described from 1846 to 1870. After that very few contributions were published. Although the highest richness of Muricea species is in the eastern Pacific shallow waters, a comprehensive systematic study of the genus does not exist. Recently we started a taxonomic review of the genus in order to validate the status of four species previously included in the genus Eumuricea. Herein we present the second part of the Muricea revision dealing with the species-group characterised by shelf-like calyces instead of tubular-like calyces (the Muricea squarrosa-group). Original type material was morphologically analysed and illustrated using optical and scanning electron microscopy. Comparative character tables are provided for the genus. The taxonomic status of the species was analysed and established by designating lectotypes, alternatively by recognising a holotype by monotypy. We conclude that the genus Muricea comprises 20 valid species, including the previous four in the Muricea squarrosa-group. We propose 10 lectotypes, a new combination and three more species groups for the genus based on morphology: the Muricea fruticosa-group, Muricea plantaginea-group and Muricea austera-group.

  19. The genus Isodon (Schrad. ex Benth. Spach in Africa and a new genus Rabdosiella Codd (Lamiaceae

    Directory of Open Access Journals (Sweden)

    L. E. Codd

    1984-12-01

    Full Text Available The typification of the genus Isodon (Schrad. ex Benth. Spach and its occurrence in Africa are discussed; an allied genus Rabdosiella Codd is described and the combinations R. calycina (Benth. Codd and R. ternifolia (D.Don Codd (the latter an Indian species are effected.

  20. The genus Isodon (Schrad. ex Benth. Spach in Africa and a new genus Rabdosiella Codd (Lamiaceae

    Directory of Open Access Journals (Sweden)

    L. E. Codd

    1984-12-01

    Full Text Available The typification of the genus Isodon (Schrad. ex Benth. Spach and its occurrence in Africa are discussed; an allied genus Rabdosiella Codd is described and the combinations R. calycina (Benth. Codd and R. ternifolia (D.Don Codd (the latter an Indian species are effected.

  1. Arachis hypogaea L.

    African Journals Online (AJOL)

    USER

    2010-03-29

    Mar 29, 2010 ... fresh seed dormancy is controlled by a single dominant gene. The average ... beyond additive and dominance effects, there is duplicate epistasis in the control ... filled with sandy soil along with five plants of each parent in the.

  2. Termites of the Genus Odontotermes are Optionally Keratophagous

    OpenAIRE

    Freymann, Bernd P.; de Visser, Sara N.; Mayemba, Emilian P.; Olff, Han

    2007-01-01

    In this study we tested experimentally whether the consumption of mammalian hooves by termites of the genus Odontotermes is a mere incidental, previously overlooked event, or whether higher termites frequently exploit hooves of ungulates as a supplementary food source. The experiment was conducted in the open woodland savanna region of Serengeti National Park, Tanzania. In total, 88 hooves of wildebeest (Connochaetes taurinus) and zebra (Equus burchelli) – of two age classes – were offered to...

  3. Infinite-genus surfaces and the universal Grassmannian

    OpenAIRE

    Davis, Simon

    1995-01-01

    Correlation functions can be calculated on Riemann surfaces using the operator formalism. The state in the Hilbert space of the free field theory on the punctured disc, corresponding to the Riemann surface, is constructed at infinite genus, verifying the inclusion of these surfaces in the Grassmannian. In particular, a subset of the class of $O_{HD}$ surfaces can be identified with a subset of the Grassmannian. The concept of flux through the ideal boundary is used to study the connection bet...

  4. Iron bacteria of the genus Siderocapsa in mineral waters.

    Science.gov (United States)

    Svorcová, L

    1975-01-01

    The occurrence of iron bacteria in mineral waters has been under study. It could be shown that Siderocapsa caronata Redlinger 1931 and S. treubii Molisch 1909 are synonymous, as well as S. eusphaera Skuja 1948 and S. major Molisch 1909, and S. botryoides Berger 1949 and S. monoica 1922. Two new species, S. hexagonata and S. quadrata, have been described. A simplified key for determining the species of the genus Sideracapsa is presented.

  5. Systematic Revision of the Genus Pancratium L. (Amaryllidaceae) in Egypt with a New Addition

    OpenAIRE

    Azza EL-HADIDY; Monier ABD EL-GHANI; Wafaa AMER; Hassan, Rania

    2011-01-01

    In Egypt, taxonomic aspects of the genus Pancratium L. (Amaryllidaceae, Pancratieae) were thoroughly studied to point out the most reliable characters for taxon delimitation. Here, we base our species on both geographical and morphological features. The detailed taxonomic revision of genus Pancratium is based on field studies and the examination of representative specimens together with the authentic types deposited in the major herbaria of Egypt and Kew. Variations in the aerial scape, spath...

  6. Identification and nomenclature of the genus Penicillium.

    Science.gov (United States)

    Visagie, C M; Houbraken, J; Frisvad, J C; Hong, S-B; Klaassen, C H W; Perrone, G; Seifert, K A; Varga, J; Yaguchi, T; Samson, R A

    2014-06-01

    Penicillium is a diverse genus occurring worldwide and its species play important roles as decomposers of organic materials and cause destructive rots in the food industry where they produce a wide range of mycotoxins. Other species are considered enzyme factories or are common indoor air allergens. Although DNA sequences are essential for robust identification of Penicillium species, there is currently no comprehensive, verified reference database for the genus. To coincide with the move to one fungus one name in the International Code of Nomenclature for algae, fungi and plants, the generic concept of Penicillium was re-defined to accommodate species from other genera, such as Chromocleista, Eladia, Eupenicillium, Torulomyces and Thysanophora, which together comprise a large monophyletic clade. As a result of this, and the many new species described in recent years, it was necessary to update the list of accepted species in Penicillium. The genus currently contains 354 accepted species, including new combinations for Aspergillus crystallinus, A. malodoratus and A. paradoxus, which belong to Penicillium section Paradoxa. To add to the taxonomic value of the list, we also provide information on each accepted species MycoBank number, living ex-type strains and provide GenBank accession numbers to ITS, β-tubulin, calmodulin and RPB2 sequences, thereby supplying a verified set of sequences for each species of the genus. In addition to the nomenclatural list, we recommend a standard working method for species descriptions and identifications to be adopted by laboratories working on this genus.

  7. Medicinal uses, phytochemistry and pharmacology of the genus Uncaria.

    Science.gov (United States)

    Zhang, Qian; Zhao, Jiao Jiao; Xu, Jian; Feng, Feng; Qu, Wei

    2015-09-15

    The genus Uncaria belongs to the family Rubiaceae, which mainly distributed in tropical regions, such as Southeast Asia, Africa and Southeast America. Their leaves and hooks have long been thought to have healing powers and are already being tested as a treatment for asthma, cancer, cirrhosis, diabetes, hypertension, stroke and rheumatism. The present review aims to provide systematically reorganized information on the ethnopharmacology, phytochemistry and pharmacology of the genus Uncaria to support for further therapeutic potential of this genus. To better understanding this genus, information on the stereo-chemistry and structure-activity relationships in indole alkaloids is also represented. The literature study of this review is based on various databases search (SCIFinder, Science Direct, CNKI, Wiley online library, Spring Link, Web of Science, PubMed, Wanfang Data, Medalink, Google scholar, ACS, Tropicos, Council of Heads of Australasian Herbaria, The New York Botanical Garden, African Plants Database at Genera Botanical Garden, The Plant List and SEINet) and library search for Biological Abstract and some local books on ethnopharmacology. 19 species of the genus Uncaria are found to be important folk medicines in China, Malaysia, Phillippines, Africa and Southeast America, etc, and have been served for the treatment of asthma, rheumatism, hyperpyrexia, hypertension and headaches, etc. More than 200 compounds have been isolated from Uncaria, including indole alkaloids, triterpenes, flavonoids, phenols, phenylpropanoids, etc. As characteristic constituents, indole alkaloids have been considered as main efficacy component for hypertension, epilepsy, depressant, Parkinson's disease and Alzheimer's disease. In addition, pharmacokinetic and metabolism investigation reveal that the indole alkaloids are likely to be absorbed, metabolized and excreted at early time points. Moreover, the specific inhibition of CYP isozymes can regulate their hydroxylation metabolites

  8. Computational identification of strain-, species- and genus-specific proteins

    Directory of Open Access Journals (Sweden)

    Thiagarajan Rathi

    2005-11-01

    Full Text Available Abstract Background The identification of unique proteins at different taxonomic levels has both scientific and practical value. Strain-, species- and genus-specific proteins can provide insight into the criteria that define an organism and its relationship with close relatives. Such proteins can also serve as taxon-specific diagnostic targets. Description A pipeline using a combination of computational and manual analyses of BLAST results was developed to identify strain-, species-, and genus-specific proteins and to catalog the closest sequenced relative for each protein in a proteome. Proteins encoded by a given strain are preliminarily considered to be unique if BLAST, using a comprehensive protein database, fails to retrieve (with an e-value better than 0.001 any protein not encoded by the query strain, species or genus (for strain-, species- and genus-specific proteins respectively, or if BLAST, using the best hit as the query (reverse BLAST, does not retrieve the initial query protein. Results are manually inspected for homology if the initial query is retrieved in the reverse BLAST but is not the best hit. Sequences unlikely to retrieve homologs using the default BLOSUM62 matrix (usually short sequences are re-tested using the PAM30 matrix, thereby increasing the number of retrieved homologs and increasing the stringency of the search for unique proteins. The above protocol was used to examine several food- and water-borne pathogens. We find that the reverse BLAST step filters out about 22% of proteins with homologs that would otherwise be considered unique at the genus and species levels. Analysis of the annotations of unique proteins reveals that many are remnants of prophage proteins, or may be involved in virulence. The data generated from this study can be accessed and further evaluated from the CUPID (Core and Unique Protein Identification system web site (updated semi-annually at http://pir.georgetown.edu/cupid. Conclusion CUPID

  9. 3D Genus Topology of Luminous Red Galaxies

    CERN Document Server

    Gott, J Richard; Park, Changbom; Kim, Juhan

    2008-01-01

    We measure the 3D genus topology of large scale structure using Luminous Red Galaxies (LRGs) in the Sloan Digital Sky Survey and find it consistent with the Gaussian random phase initial conditions expected from the simplest scenarios of inflation. This studies 3D topology on the largest scales ever obtained. The topology is sponge-like. We measure topology in two volume-limited samples: a dense shallow sample studied with smoothing length of 21h^{-1}Mpc, and a sparse deep sample studied with a smoothing length of 34h^{-1}Mpc. The amplitude of the genus curve is measured with 4% uncertainty. Small distortions in the genus curve expected from non-linear biasing and gravitational effects are well explained (to about 1-\\sigma accuracy) by N-body simulations using a subhalo-finding technique to locate LRGs. This suggests the formation of LRGs is a clean problem that can be modeled well without any free fitting parameters. This bodes well for using LRGs to measure the characteristic scales such as the baryon oscil...

  10. Mycorrhizal status of the genus Carex (Cyperaceae).

    Energy Technology Data Exchange (ETDEWEB)

    Miller, R. M.; Smith, C. I.; Jastrow, J. D.; Bever, J. D.; Environmental Research; Univ. of Chicago

    1999-01-01

    The Cyperaccae have generally been considered nonmycorrhizal, although recent evidence suggests that mycotrophy may be considerably more widespread among sedges than was previously realized. This study surveyed 23 species of Carex occurring in upland and wetland habitats in northeastern Illinois. Mycorrhizal infection by arbuscular fungi was found in the roots of 16 species of Carex and appears to occur in response to many factors, both environmental and phylogenetic. While some species appear to be obligately nonmycorrhizal, edaphic influences may be responsible for infection in others. In five of the seven Carex species that were nonmycorrrhizal, a novel root character, the presence of bulbous-based root hairs, was identified. The taxonomically patchy distribution of the distinctive root hair trait suggests that these structures may have evolved several times within the genus. Evidence of multiple independent origins of the root hair trait lends support to the hypothesis that root hairs represent an adaptation to nonmycotrophy. Although taxonomic position does seem to be of importance in determining the mycorrhizal dependence of sedges, the pattern may be a patchwork of both mycorrhizal clades and clades that have adapted to the nonmycorrhizal state.

  11. Functional proteomics within the genus Lactobacillus.

    Science.gov (United States)

    De Angelis, Maria; Calasso, Maria; Cavallo, Noemi; Di Cagno, Raffaella; Gobbetti, Marco

    2016-03-01

    Lactobacillus are mainly used for the manufacture of fermented dairy, sourdough, meat, and vegetable foods or used as probiotics. Under optimal processing conditions, Lactobacillus strains contribute to food functionality through their enzyme portfolio and the release of metabolites. An extensive genomic diversity analysis was conducted to elucidate the core features of the genus Lactobacillus, and to provide a better comprehension of niche adaptation of the strains. However, proteomics is an indispensable "omics" science to elucidate the proteome diversity, and the mechanisms of regulation and adaptation of Lactobacillus strains. This review focuses on the novel and comprehensive knowledge of functional proteomics and metaproteomics of Lactobacillus species. A large list of proteomic case studies of different Lactobacillus species is provided to illustrate the adaptability of the main metabolic pathways (e.g., carbohydrate transport and metabolism, pyruvate metabolism, proteolytic system, amino acid metabolism, and protein synthesis) to various life conditions. These investigations have highlighted that lactobacilli modulate the level of a complex panel of proteins to growth/survive in different ecological niches. In addition to the general regulation and stress response, specific metabolic pathways can be switched on and off, modifying the behavior of the strains.

  12. Fungal genus Hypocrea/Trichoderma: from barcodes to biodiversity

    Institute of Scientific and Technical Information of China (English)

    Christian P. KUBICEK; Monika KOMON-ZELAZOWSKA; Irina S. DRUZHININA

    2008-01-01

    Hypocrea/Trichoderma is a genus of soil-borne or wood-decaying fungi containing members important to mankind as producers of industrial enzymes and biocontrol agents against plant pathogens, but also as opportunistic pathogens of immuno-compromised humans and animals, while others can cause damage to cultivated mushroom. With the recent advent of a reliable, BarCode-aided identification system for all known taxa of Trichoderma and Hypocrea, it became now possible to study some of the biological fundamentals of the diversity in this fungal genus in more detail. In this article, we will therefore review recent progress in (1) the understanding of the geographic distribution of individual taxa; (2) mechanisms of speciation leading to development of mushroom diseases and facultative human mycoses; and (3) the possible correlation of specific traits of secondary metabolism and molecular phylogeny.

  13. Molecular Identification of a Species in Genus Nannochloropsis

    Institute of Scientific and Technical Information of China (English)

    LI Si; PAN Kehou; ZHU Baohua; MA Xiaolei; LIANG Xin; YANG Guanpin

    2011-01-01

    Nannochloropsis is a genus of marine eukaryotic unicellular algae,which belongs to class Eustigmatophyceae.The species of Nannochloropsis which are fine rotifer feed and rich in eicosapentaenoic acid (EPA) are economically important.Species in this genus are usually 2-5μm in size and are morphologically similar,which makes their identification difficult.We obtained a monoclone of Nannochloropsis with plating method in this study.DNA was extracted and the quality was determined by restriction enzyme digestion and spectrophotometer analysis.The DNA extracted was used to amplify the sequences of 18S ribosomal RNA gene,ITS region of ribosomal RNA transcription unit and rbcL gene.The phylogenetic analysis was carried out by constructing the neighbor-joining trees with Tamura-Nei distances.The phylogenetic analysis showed that the monoclone is N.oceanica.

  14. Parallel independent evolution of pathogenicity within the genus Yersinia

    Science.gov (United States)

    Reuter, Sandra; Connor, Thomas R.; Barquist, Lars; Walker, Danielle; Feltwell, Theresa; Harris, Simon R.; Fookes, Maria; Hall, Miquette E.; Petty, Nicola K.; Fuchs, Thilo M.; Corander, Jukka; Dufour, Muriel; Ringwood, Tamara; Savin, Cyril; Bouchier, Christiane; Martin, Liliane; Miettinen, Minna; Shubin, Mikhail; Riehm, Julia M.; Laukkanen-Ninios, Riikka; Sihvonen, Leila M.; Siitonen, Anja; Skurnik, Mikael; Falcão, Juliana Pfrimer; Fukushima, Hiroshi; Scholz, Holger C.; Prentice, Michael B.; Wren, Brendan W.; Parkhill, Julian; Carniel, Elisabeth; Achtman, Mark; McNally, Alan; Thomson, Nicholas R.

    2014-01-01

    The genus Yersinia has been used as a model system to study pathogen evolution. Using whole-genome sequencing of all Yersinia species, we delineate the gene complement of the whole genus and define patterns of virulence evolution. Multiple distinct ecological specializations appear to have split pathogenic strains from environmental, nonpathogenic lineages. This split demonstrates that contrary to hypotheses that all pathogenic Yersinia species share a recent common pathogenic ancestor, they have evolved independently but followed parallel evolutionary paths in acquiring the same virulence determinants as well as becoming progressively more limited metabolically. Shared virulence determinants are limited to the virulence plasmid pYV and the attachment invasion locus ail. These acquisitions, together with genomic variations in metabolic pathways, have resulted in the parallel emergence of related pathogens displaying an increasingly specialized lifestyle with a spectrum of virulence potential, an emerging theme in the evolution of other important human pathogens. PMID:24753568

  15. Water wave communication in the genus Bombina (amphibia)

    Science.gov (United States)

    Seidel, B.; Yamashita, M.; Choi, I.-H.; Dittami, J.

    2001-01-01

    Amphibians were phylogenetically the first vertebrates to leave the aquatic environment and cope with terrestrial conditions including effects of gravity and substrate on movement and communication. Studies of extant primitive amphibians, which have conserved ancestral morphology and behavior, may help us to understand how gravitational adaptation from aquatic to terrestrial environments occurred. The anuran genus Bombina is a candidate for this type of investigation. In particular, a member of this genus, B. orientalis, is known for its low reaction threshold to minor changes of angular acceleration. We hypothesize that a heightened sensitivity to angular and mechanical accelerations evolved with wave communication. Comparisons of such behavior among B. variegata, B. bombina and B. orientalis may shed light on the evolution of reproductive systems based on water wave communication and relevant vestibular sensitivity. This may represent a transition to derived vocalization modes, which is seen in B. bombina to a certain degree.

  16. Mathieu Moonshine in the elliptic genus of K3

    Science.gov (United States)

    Gaberdiel, Matthias R.; Hohenegger, Stefan; Volpato, Roberto

    2010-10-01

    It has recently been conjectured that the elliptic genus of K3 can be written in terms of dimensions of Mathieu group {mathbb{M}_{24}} representations. Some further evidence for this idea was subsequently found by studying the twining genera that are obtained from the elliptic genus upon replacing dimensions of Mathieu group representations by their characters. In this paper we find explicit formulae for all (remaining) twining genera by making an educated guess for their general modular properties. This allows us to identify the decomposition of all expansion coefficients in terms of dimensions of {mathbb{M}_{24}} -representations. For the first 500 coefficients we verify that the multiplicities with which these representations appear are indeed all non-negative integers. This represents very compelling evidence in favour of the conjecture.

  17. The genus Chlamydotheca Saussure (Crustacea: Ostracoda in northeastern Argentina

    Directory of Open Access Journals (Sweden)

    Analía R. Díaz

    Full Text Available The genus Chlamydotheca Saussure, 1858 is a typical representative of the Neotropical ostracod fauna that occupies lotic and lentic environments including temporary and permanent ponds. Up to the present, four species have been recorded in Argentina: C. iheringi (Sars, C. incisa (Claus and C. leuckarti (Claus, and C. symmetrica (Vávra. Temporary and permanent ponds of this region were sampled for ostracods, using a fine mesh net. Three species belonging to the genus Chlamydotheca were collected of which C. arcuata (Sars is recorded for first time for the Chacoan region. Limb morphology was studied under light microscope and line drawings were made using camera lucida. Valves were photographed under scanning electron microscope and redescriptions of C. arcuata and C. iheringi are provided and distributional aspects of the species sampled are discussed.

  18. A revision of the genus Antepione Packard with description of the new genus Pionenta Ferris (Lepidoptera, Geometridae, Ennominae

    Directory of Open Access Journals (Sweden)

    Clifford Ferris

    2010-12-01

    Full Text Available Based on genitalic studies, the new genus Pionenta is established for two taxa formerly placed under Antepione. The taxa hewesata and ochreata (and previously associated synonyms are now synonomized as Pionenta ochreata. Three species of Antepione are now recognized: A. thisoaria, A. imitata, A. tiselaaria with the taxa comstocki, constans, and indiscretata synonomized under A. imitata. No new species are described. Adults and genitalia are illustrated, including type specimens.

  19. A Genus Oblivious Approach to Cross Parameterization

    Energy Technology Data Exchange (ETDEWEB)

    Bennett, J C; Pascucci, V; Joy, K I

    2008-06-16

    In this paper we present a robust approach to construct a map between two triangulated meshes, M and M{prime} of arbitrary and possibly unequal genus. We introduce a novel initial alignment scheme that allows the user to identify 'landmark tunnels' and/or a 'constrained silhouette' in addition to the standard landmark vertices. To describe the evolution of non-landmark tunnels we automatically derive a continuous deformation from M to M{prime} using a variational implicit approach. Overall, we achieve a cross parameterization scheme that is provably robust in the sense that it can map M to M{prime} without constraints on their relative genus. We provide a number of examples to demonstrate the practical effectiveness of our scheme between meshes of different genus and shape.

  20. The genus Craterium (Myxomycetes in Poland

    Directory of Open Access Journals (Sweden)

    Wanda Stojanowska

    2014-08-01

    Full Text Available The paper presents an extended list of species of the genus Craterium, hitherto found in Poland.In the monograph on Polish slime moulds Krzemieniewska (1960 3 species and 1 variety of that genus were mentioned. Lately, the following two new species have been recorded: Craterium concinnum Rex. and C. brunneum Nann.-Bremek. Craterium muscorum Ing, reported earlier under the name of Badhamia rubiginosa (Chevall Rostaf. is also included in the present paper. All together, with Cratoium aureum (Schumach. Rostaf. rarely occurring in Poland, and widespread C. minutum (Leers Fr., C. leucocephalum (Pers. Ditmar with its variety scyphoides (Cooke et Balf. G. Lister, the number of taxa of the genus Craterium in Poland increased up to 7.

  1. The genus Gymnospermium (Berberidaceae) in the Balkans

    DEFF Research Database (Denmark)

    Tan, Kit; Shuka, Lulezim; Siljak-Yakovlev, Sonja

    2011-01-01

    A revision of the genus Gymnospermium (Berberidaceae) in the Balkan Peninsula is carried out. Three species are recognised. Gymnospermium maloi is described as a new species from Mt. Picari in Gjirokastra district, southern Albania. It is compared with the closely related G. scipetarum which has...... has been reported for other members of the genus. The nuclear DNA content (2C-value) of all three species was determined. The genome size of G. maloi is 29.44 (± 0.47) pg, for G. scipetarum (chromosome number still unknown) 29.55 (± 1.35) pg, and for G. peloponnesiacum (2n = 2x = 16) 31.93 (± 2.38) pg....... These values are the first genome size measurements for the genus. All three species are mapped and fully illustrated. A key to the European species is also presented....

  2. Prion protein degradation by lichens of the genus Cladonia

    Science.gov (United States)

    Bennett, James P.; Rodriguez, Cynthia M.; Johnson, Christopher J.

    2012-01-01

    It has recently been discovered that lichens contain a serine protease capable of degrading the pathogenic prion protein, the etiological agent of prion diseases such as sheep scrapie and cervid chronic wasting disease. Limited methods are available to degrade or inactivate prion disease agents, especially in the environment, and lichens or their serine protease could prove important for management of these diseases. Scant information is available regarding the presence or absence of the protease responsible for degrading prion protein (PrP) in lichen species and, in this study, we tested the hypothesis that PrP degradation activity in lichens is phylogenetically-based by testing 44 species of Cladonia lichens, a genus for which a significant portion of the phylogeny is well established. We categorized PrP degradation activity among the 44 species (high, moderate, low or none) and found that activity in Cladonia species did not correspond with phylogenetic position of the species. Degradation of PrP did correspond, however, with three classical taxonomic characters within the genus: species with brown apothecia, no usnic acid, and the presence of a cortex. Of the 44 species studied, 18 (41%) had either high or moderate PrP degradation activity, suggesting the protease may be frequent in this genus of lichens.

  3. Ecological Distribution Of The Genus Crotalaria In Nigeria

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    Odewo

    2015-08-01

    Full Text Available Abstract Geographical distribution and morphological features of the genus Crotalaria were studied. Methods follow conventional practice as reported by previous studies. Thirty six species of the genus Crotalaria were shown to be distributed in Nigeria. The genera were allopathic in nature. The species such as C. bongensis C. atrorubens C. cleomifolia C. anthyllopsis C. cuspidata C. bamendul C. calycina C. hyssopifolia C. incana C. graminicola and C. macrocalyx were prominent in savannah zones while C. acervata C. cylindrical C. cephalotes C. comosa C. retusa C.doniana C. glauca C. falcata C. goreensis among others were common in cultivated areas in forest zone of Nigeria. Qualitative leaf morphological features of selected crotalaria species in Nigeria were also revealed. It shows that the leaf margin leaf surface and leaf base are similar in features except in leaf shape that vary from lanceolate C. comosa and C. bongensis oblanceolate C. retusa C. goreensis C. ononoidea and C. lachnosema to obovate C. mucronata and C. naragutensis. This implies that most of the genus Crotalaria displays similar characteristic and the features among them shows overlap.

  4. Clinical and epidemiological features of the genus Malassezia in Iran.

    Directory of Open Access Journals (Sweden)

    Elham Zeinali

    2014-10-01

    Full Text Available The genus Malassezia contains an expanding list of lipophilic yeasts involve in the etiology of various superficial fungal infections. Pityriasis versicolor (PV is the most prevalent Malassezia-related infection distributed worldwide. In the present study, clinical and epidemiological features of the genus Malassezia are discussed with special focus on PV in Iran.During June 2012 to April 2013, among 713 confirmed cases of fungal infections, 68 (9.5% were diagnosed as PV by positive direct microscopy results in 20% potassium hydroxide (KOH preparation of skin scrapings. All the specimens were cultured on modified Dixon agar and incubated at 32°C for 10 days. Identification of the isolated yeasts was carried out based on macro- and microscopic morphology, catalase test, utilization of Tweens, polyethoxylated castor oil (EL slant, and hydrolysis of esculin and utilization of Tween-60 (TE slant.Out of 68 skin scrapings, 55 (80.9% yielded yeast colonies on mDixon's agar which were finally identified as M. globosa (36.36%, M. pachydermatis (29.08%, M. furfur (23.65%, M. slooffiae (7.28% and M. obtusa (3.64%.Results of the present study further indicate clinico-epidemiological importance of the genus Malassezia with growing importance of M. pachydermatis as a major species involve in the etiology of pityriasis versicolor. These findings are of major concern in management of Malassezia-related diseases.

  5. Genus-wide physicochemical evidence of extracellular crystalline silver nanoparticles biosynthesis by Morganella spp.

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    Rasesh Y Parikh

    Full Text Available This study was performed to determine whether extracellular silver nanoparticles (AgNPs production is a genus-wide phenotype associated with all the members of genus Morganella, or only Morganella morganii RP-42 isolate is able to synthesize extracellular Ag nanoparticles. To undertake this study, all the available Morganella isolates were exposed to Ag+ ions, and the obtained nanoproducts were thoroughly analyzed using physico-chemical characterization tools such as transmission electron microscopy (TEM, UV-visible spectrophotometry (UV-vis, and X-ray diffraction (XRD analysis. It was identified that extracellular biosynthesis of crystalline silver nanoparticles is a unique biochemical character of all the members of genus Morganella, which was found independent of environmental changes. Significantly, the inability of other closely related members of the family Enterobacteriaceae towards AgNPs synthesis strongly suggests that AgNPs synthesis in the presence of Ag+ ions is a phenotypic character that is uniquely associated with genus Morganella.

  6. A Review of the Genus Grapholita (Lepidoptera, Tortricidae in North Korea

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    Bong-Kyu Byun

    2012-10-01

    Full Text Available In North Korea, the first report of the family Tortricidae, comprising 34 species, was made in 1969. It includes three species of the genus Grapholita (G. inopinata, G. molesta, and G. turionana. Among them, G. turionana is now placed under the genus Blastesthia. In the present study, a total of four species of the genus Grapholita are recognized from North Korea, based on material deposited in the Hungarian Natural History Museum, Hungary. Of them, Grapholita molesta (Busck, is reported for the first time from North Korea. In the present study, G. inopinata was not found. All the known species are enumerated with illustrations of adults and genitalia. Also a key for the genus is given.

  7. Slope equalities for genus 5 surface fibrations

    CERN Document Server

    Tenni, Elisa

    2010-01-01

    K. Konno proved a slope equality for fibred surfaces with fibres of odd genus and general fibre of maximal gonality. More precisely he found a relation between the invariants of the fibration and certain weights of special fibres (called the Horikawa numbers). We give an alternative and more geometric proof in the case of a genus 5 fibration, under generality assumptions. In our setting we are able to prove that the fibre with positive Horikawa numbers are precisely the trigonal ones, we compute their weights explicitly and thus we exhibit explicit examples of regular surfaces with assigned invariants and Horikawa numbers.

  8. Systematics of the genus Daubenya (Hyacinthaceae: Massonieae

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    J. C. Manning

    2002-12-01

    Full Text Available Daubenya Lindl. was until recently thought to comprise the single species D. aurea Lindl. but is now considered to include the monotypic genera Androsiphon Schltr. and Amphisiphon W.F.Barker. as well as the species previously referred to the genus Neobakeria Schltr. Eight species are now recognized in the genus, including the new combinations Daubenya comata (Burch, ex Baker J.C.Manning & A.M.van der Merwe and D. zeyheri (Kunth J.C.Manning & A.M.van der Merwe. Each species is fully described and illustrated in black-and-white and in colour. A key to the species, and distribution maps are provided.

  9. Recent and rapid radiation of the lichen genus Sticta in the Western Indian Ocean islands

    OpenAIRE

    Simon, Antoine; Magain, Nicolas; Goffinet, Bernard; Sérusiaux, Emmanuël

    2016-01-01

    In the framework of a global project on the phylogeny of the lichen genus Sticta (Lobariaceae), extensive sampling was performed on the islands of Reunion and Mauritius as well as in several parts of Madagascar (mainly in two National Parks : Marojejy and Amber Mountain). The aim of this study is to provide the first comprehensive molecular phylogeny of the genus in the Western Indian Ocean islands (and more specifically of a presumably local endemic lineage), and to date its local radiation....

  10. Chemical Constituents and Biological Properties of Species of the Genus Serjania

    OpenAIRE

    2015-01-01

    Serjania genus is native of Neotropics, from Mexico to Northern Argentina, and includes more than 230 species, most of them found in Mexico and Brazil. Although the genus is scarcely studied, the scientific literature and ethnobotanic information suggest that the extracts or fractions of these extracts have components with different biological properties. A bibliographic search in SciFinder and Scopus data carried out in April 2014 and using the keyword Serjania showed eighteen compounds belo...

  11. Recognition of the tick genus Anocentor Schulze, 1937 (Acari: Ixodidae) by numerical taxonomy.

    Science.gov (United States)

    Borges, L M; Labruna, M B; Linardi, P M; Ribeiro, M F

    1998-09-01

    We report on an evaluation of the systematic position of the tick Anocentor nitens (Neumann), examining particularly whether Anocentor should be regarded as a subgenus of Dermacentor or as a separate genus. Twelve species of Ixodidae were analyzed phenetically by using 24 characters of adult ticks. A phenogram indicated 3 clusters, with Anocentor more closely related to Rhipicephalus than to Dermacentor. The results of this study endorse the validity of the monotypic genus Anocentor.

  12. Karyological and morphological variations within the genus Dysphania (Chenopodiaceae) in Bulgaria

    OpenAIRE

    Grozeva, Neli H.; Cvetanova, Yanka G.

    2013-01-01

    The karyological and morphological variability of species from the genus Dysphania were studied. The results demonstrated that genus Dysphania is represented in Bulgaria by five species: Dysphania ambrosioides, D. multifida, D. botrys, D. schraderiana and D. pumilio. The first two species are tetraploids with chromosome number 2n = 32 for D. ambrosioides and 2n = 36 for D. multifida. The remaining three species are diploids with 2n = 18. The results from statistical analysis demonstrated that...

  13. [Production of inhibiting plant growth and development hormones by pathogenic for legumes Pseudomonas genus bacteria].

    Science.gov (United States)

    Dankevich, L A

    2013-01-01

    It has been studied the ability of pathogenic for legumes pathovars of Pseudomonas genus to produce ethylene and abscisic acid in vitro. A direct correlation between the level of ethylene production by agent of bacterial pea burn--Pseudomonas syringae pv. pisi and level of its aggressiveness for plants has been found. It is shown that the amount of abscisic acid synthesized by pathogenic for legumes Pseudomonas genus bacteria correlates with their aggressiveness for plants.

  14. A taxonomic revision of the genus Smithia Ait. (Fabaceae in South India

    Directory of Open Access Journals (Sweden)

    Anoop P. Balan

    2017-05-01

    Full Text Available The genus Smithia in South India is revised based on field and herbarium studies. A brief history of the genus along with a key to the identification of the South Indian species, updated nomenclature, detailed descriptions, illustrations, photo plates and notes on distribution, phenology and ecology are provided for each species. Status of S. conferta var. geminiflora is reinstated. Four names are lectotypified, namely, Smithia bodinierii, S. conferta var. geminiflora, S. venkobarowii and S. yunnanensis

  15. Ward Identities of W_{\\infty} Symmetry and Higher Genus Amplitudes in 2D String Theory

    OpenAIRE

    Hamada, Ken-ji

    1995-01-01

    The Ward identities of the $W_{\\infty}$ symmetry in two dimensional string theory in the tachyon background are studied in the continuum approach. We consider amplitudes different from 2D string ones by the external leg factor and derive the recursion relations among them. The recursion relations have non-linear terms which give relations among the amplitudes defined on different genus. The solutions agree with the matrix model results even in higher genus. We also discuss differences of role...

  16. Calongea, a new genus of truffles in the Pezizaceae (Pezizales

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    Trappe, James M.

    2009-12-01

    Full Text Available Phylogenetic analysis of the ITS and LSU rDNA of Pachyphloeus species from Europe and North America revealed a new truffle genus. These molecular analyses plus sequences downloaded from a BLAST search in GenBank indicated that Pachyphloeus prieguensis is within the Pezizaceae but well outside of the genus Pachyphloeus. Morphological differences in the peridial and glebal hyphae and spores distinguish this genus from Pachyphloeus. We here propose the monotypic new genus Calongea, with the type species C. prieguensis comb. nov., in honor of Prof. Francisco de Diego Calonge, who has long studied the truffle fungi of Spain and participated in describing the type species of Calongea.El análisis filogenético del ITS y LSU rDNA de especies europeas y norteamericanas de Pachyphloeus revelan un género nuevo de trufa. Los datos moleculares de este estudio, además de las secuencias obtenidas de una búsqueda BLAST en GenBank, indican que Pachyphloeus prieguensis es un miembro de la familia Pezizaceae pero no está relacionado con ninguna otra especie hipogea o epigea de dicha familia. Encontramos diferencias morfológicas en las hifas del peridio y gleba así como en las esporas que morfológicamente distinguen éste de Pachyphloeus. Proponemos el nuevo género monotípico Calongea, con C. prieguensis comb. nov. como la especie tipo, en honor a uno de los descubridores originales, Prof. Francisco de Diego Calonge.

  17. Femeniasia, novus genus Carduearum

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    Susanna de la Serna, Alfonso

    1988-01-01

    Full Text Available The systematic position of Centaurea balearica Rodríguez Femenias (Asteraceae-Cardueae is studied. A detailed analysis or its anatomy, with special reference to the carpology, forces the author lo reject its inclusion in the genus Centaurea or in any other genus or the tribe. A new genus, Femeniasia Susanna. is hence described, and the new nomenclatural combinari en Femeniasia balearica (Rodríguez Femenías Susanna is proposed. The relationship or Femeniasia and the other genera of the tribe is discussed; the author concludes that Femeniasia is a quite isolated genus in the Cardueae-Carduinae .

    [ca] Estudi de la posició sistemàtica de Centaurea balearica Rodríguez Femenías (Asteraceae-Cardueae . De l'anàlisi minuciosa de la seva anatomia, especialment de les seves cípseles, resulta que l'esmentada espècie no és cap Centaurea; tampoc pot ésser inclosa en cap del altres gèneres de la tribu. En conseqüència, hom descriu un nou gènere, Femeniasia Susanna, i proposa la combinació Femeniasia balearica (Rodríguez Femenías Susanna. Son analitzades les possibles relacions de parentiu amb d'altres gèneres del grup i l'autor arriba a la conclusió que Femeniasia és un gènere clarament isolat entre les Cardueae-Carduinae.

  18. An Approach to the Chemosystematics of the Genus Cucumis L.

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    A. J. A. Petrus

    2014-03-01

    Full Text Available Phylogenetic relationships in the order Cucurbitales as well as the phylogeny and classification of its taxonomically most problematic family, Cucurbitaceae, have been the focus of several studies. Taxonomists over the years have differed on the delimitation of Cucumis L. and numerous taxonomic treatments have been proposed since the pioneering work of Linnaeus (1753. Using maximum parsimony, maximum likelihood, and Bayesian inference analyses of sequence data from the nuclear and chloroplast genomes, the genus Cucumis has recently been recircumscribed. Among the various chemical classes elaborated in plants, the foliar phenolics express greater stability in general and contribute significantly to the chemosystematics of both, angiosperms and gymnosperms. Hence, it is felt that an evaluation of the available literature on the foliar flavonoid constitution of the recently defined Cucumis would be relevant. This paper, therefore, analyses the distribution of the phytophenols in the taxa to ascertain the characteristically common foliar marker biochemical of the genus in addition to an attempt to justify the inclusion of the genus Mukia within Cucumis.

  19. Operculomyces is a new genus in the order Rhizophydiales.

    Science.gov (United States)

    Powell, Martha J; Letcher, Peter M; Longcore, Joyce E

    2011-01-01

    In recent years molecular phylogenies based on analyses of rDNA sequences have advanced knowledge of the Chytridiomycota, but much alpha taxonomic work remains. We have discovered an operculate chytrid that molecular phylogenies placed in the Rhizophydiales, an order that currently contains a single operculate species, the rest having inoperculate zoospore release. Because descriptions of genera in the Chytridiomycota now rely on transmission electron microscopic features of the zoospore as well as molecular evidence we studied the zoospore ultrastructure of the isolate to confirm its placement in the Rhizophydiales and to evaluate it as a new genus. Its suite of ultrastructural characters confirmed its placement within the Rhizophydiales, and its J-shaped, multilayered spur and the position of the nonflagellate centriole at a slight angle to the kinetosome make it unique within the Rhizophydiales, thus supporting molecular evidence indicating that the isolate represents a new genus. Herein we describe zoospore ultrastructure and scanning electron and light microscopic level morphology of this monocentric, endogenous, operculate chytrid and describe it as a new genus and species, Operculomyces laminatus.

  20. Determining the vulnerability of Mexican pine forests to bark beetles of the genus Dendroctonus Erichson (Coleoptera: Curculionidae: Scolytinae)

    Science.gov (United States)

    Y. Salinas-Moreno; A. Ager; C.F. Vargas; J.L. Hayes; G. Zuniga

    2010-01-01

    Bark beetles of the genus Dendroctonus are natural inhabitants of forests; under particular conditions some species of this genus can cause large-scale tree mortality. However, only in recent decades has priority been given to the comprehensive study of these insects in Mexico. Mexico possesses high ecological diversity in Dendroctonus-...