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Sample records for generalized linear model

  1. Foundations of linear and generalized linear models

    CERN Document Server

    Agresti, Alan

    2015-01-01

    A valuable overview of the most important ideas and results in statistical analysis Written by a highly-experienced author, Foundations of Linear and Generalized Linear Models is a clear and comprehensive guide to the key concepts and results of linear statistical models. The book presents a broad, in-depth overview of the most commonly used statistical models by discussing the theory underlying the models, R software applications, and examples with crafted models to elucidate key ideas and promote practical model building. The book begins by illustrating the fundamentals of linear models,

  2. Generalized, Linear, and Mixed Models

    CERN Document Server

    McCulloch, Charles E; Neuhaus, John M

    2011-01-01

    An accessible and self-contained introduction to statistical models-now in a modernized new editionGeneralized, Linear, and Mixed Models, Second Edition provides an up-to-date treatment of the essential techniques for developing and applying a wide variety of statistical models. The book presents thorough and unified coverage of the theory behind generalized, linear, and mixed models and highlights their similarities and differences in various construction, application, and computational aspects.A clear introduction to the basic ideas of fixed effects models, random effects models, and mixed m

  3. Introduction to general and generalized linear models

    CERN Document Server

    Madsen, Henrik

    2010-01-01

    IntroductionExamples of types of data Motivating examples A first view on the modelsThe Likelihood PrincipleIntroduction Point estimation theory The likelihood function The score function The information matrix Alternative parameterizations of the likelihood The maximum likelihood estimate (MLE) Distribution of the ML estimator Generalized loss-function and deviance Quadratic approximation of the log-likelihood Likelihood ratio tests Successive testing in hypothesis chains Dealing with nuisance parameters General Linear ModelsIntroduction The multivariate normal distribution General linear mod

  4. Multivariate covariance generalized linear models

    DEFF Research Database (Denmark)

    Bonat, W. H.; Jørgensen, Bent

    2016-01-01

    We propose a general framework for non-normal multivariate data analysis called multivariate covariance generalized linear models, designed to handle multivariate response variables, along with a wide range of temporal and spatial correlation structures defined in terms of a covariance link...... function combined with a matrix linear predictor involving known matrices. The method is motivated by three data examples that are not easily handled by existing methods. The first example concerns multivariate count data, the second involves response variables of mixed types, combined with repeated...... are fitted by using an efficient Newton scoring algorithm based on quasi-likelihood and Pearson estimating functions, using only second-moment assumptions. This provides a unified approach to a wide variety of types of response variables and covariance structures, including multivariate extensions...

  5. Multivariate generalized linear mixed models using R

    CERN Document Server

    Berridge, Damon Mark

    2011-01-01

    Multivariate Generalized Linear Mixed Models Using R presents robust and methodologically sound models for analyzing large and complex data sets, enabling readers to answer increasingly complex research questions. The book applies the principles of modeling to longitudinal data from panel and related studies via the Sabre software package in R. A Unified Framework for a Broad Class of Models The authors first discuss members of the family of generalized linear models, gradually adding complexity to the modeling framework by incorporating random effects. After reviewing the generalized linear model notation, they illustrate a range of random effects models, including three-level, multivariate, endpoint, event history, and state dependence models. They estimate the multivariate generalized linear mixed models (MGLMMs) using either standard or adaptive Gaussian quadrature. The authors also compare two-level fixed and random effects linear models. The appendices contain additional information on quadrature, model...

  6. Multivariate Generalized Linear Mixed Models Using R

    CERN Document Server

    Berridge, Damon M

    2011-01-01

    To provide researchers with the ability to analyze large and complex data sets using robust models, this book presents a unified framework for a broad class of models that can be applied using a dedicated R package (Sabre). The first five chapters cover the analysis of multilevel models using univariate generalized linear mixed models (GLMMs). The next few chapters extend to multivariate GLMMs and the last chapters address more specialized topics, such as parallel computing for large-scale analyses. Each chapter includes many real-world examples implemented using Sabre as well as exercises and

  7. Using R In Generalized Linear Models

    Directory of Open Access Journals (Sweden)

    Mihaela Covrig

    2015-09-01

    Full Text Available This paper aims to approach the estimation of generalized linear models (GLM on the basis of the glm routine package in R. Particularly, regression models will be analyzed for those cases in which the explained variable follows a Poisson or a Negative Binomial distribution. The paper will briefly present the GLM methodology for count data, while the practical part will revolve around estimating and comparing models in which the response variable shows the number of claims in a portfolio of automobile insurance policies.

  8. Generalized Quadratic Linearization of Machine Models

    OpenAIRE

    Parvathy Ayalur Krishnamoorthy; Kamaraj Vijayarajan; Devanathan Rajagopalan

    2011-01-01

    In the exact linearization of involutive nonlinear system models, the issue of singularity needs to be addressed in practical applications. The approximate linearization technique due to Krener, based on Taylor series expansion, apart from being applicable to noninvolutive systems, allows the singularity issue to be circumvented. But approximate linearization, while removing terms up to certain order, also introduces terms of higher order than those removed into the system. To overcome th...

  9. Testing Parametric versus Semiparametric Modelling in Generalized Linear Models

    NARCIS (Netherlands)

    Härdle, W.K.; Mammen, E.; Müller, M.D.

    1996-01-01

    We consider a generalized partially linear model E(Y|X,T) = G{X'b + m(T)} where G is a known function, b is an unknown parameter vector, and m is an unknown function.The paper introduces a test statistic which allows to decide between a parametric and a semiparametric model: (i) m is linear, i.e. m(

  10. A Note on the Identifiability of Generalized Linear Mixed Models

    DEFF Research Database (Denmark)

    Labouriau, Rodrigo

    2014-01-01

    I present here a simple proof that, under general regularity conditions, the standard parametrization of generalized linear mixed model is identifiable. The proof is based on the assumptions of generalized linear mixed models on the first and second order moments and some general mild regularity ...... conditions, and, therefore, is extensible to quasi-likelihood based generalized linear models. In particular, binomial and Poisson mixed models with dispersion parameter are identifiable when equipped with the standard parametrization......I present here a simple proof that, under general regularity conditions, the standard parametrization of generalized linear mixed model is identifiable. The proof is based on the assumptions of generalized linear mixed models on the first and second order moments and some general mild regularity...

  11. The General Linear Model as Structural Equation Modeling

    Science.gov (United States)

    Graham, James M.

    2008-01-01

    Statistical procedures based on the general linear model (GLM) share much in common with one another, both conceptually and practically. The use of structural equation modeling path diagrams as tools for teaching the GLM as a body of connected statistical procedures is presented. A heuristic data set is used to demonstrate a variety of univariate…

  12. Thurstonian models for sensory discrimination tests as generalized linear models

    DEFF Research Database (Denmark)

    Brockhoff, Per B.; Christensen, Rune Haubo Bojesen

    2010-01-01

    Sensory discrimination tests such as the triangle, duo-trio, 2-AFC and 3-AFC tests produce binary data and the Thurstonian decision rule links the underlying sensory difference 6 to the observed number of correct responses. In this paper it is shown how each of these four situations can be viewed...... as a so-called generalized linear model. The underlying sensory difference 6 becomes directly a parameter of the statistical model and the estimate d' and it's standard error becomes the "usual" output of the statistical analysis. The d' for the monadic A-NOT A method is shown to appear as a standard...... linear contrast in a generalized linear model using the probit link function. All methods developed in the paper are implemented in our free R-package sensR (http://www.cran.r-project.org/package=sensR/). This includes the basic power and sample size calculations for these four discrimination tests...

  13. Extending the linear model with R generalized linear, mixed effects and nonparametric regression models

    CERN Document Server

    Faraway, Julian J

    2005-01-01

    Linear models are central to the practice of statistics and form the foundation of a vast range of statistical methodologies. Julian J. Faraway''s critically acclaimed Linear Models with R examined regression and analysis of variance, demonstrated the different methods available, and showed in which situations each one applies. Following in those footsteps, Extending the Linear Model with R surveys the techniques that grow from the regression model, presenting three extensions to that framework: generalized linear models (GLMs), mixed effect models, and nonparametric regression models. The author''s treatment is thoroughly modern and covers topics that include GLM diagnostics, generalized linear mixed models, trees, and even the use of neural networks in statistics. To demonstrate the interplay of theory and practice, throughout the book the author weaves the use of the R software environment to analyze the data of real examples, providing all of the R commands necessary to reproduce the analyses. All of the ...

  14. General linear matrix model, Minkowski spacetime and the Standard Model

    CERN Document Server

    Belyea, Chris

    2010-01-01

    The Hermitian matrix model with general linear symmetry is argued to decouple into a finite unitary matrix model that contains metastable multidimensional lattice configurations and a fermion determinant. The simplest metastable state is a Hermitian Weyl kinetic operator of either handedness on a 3+1 D lattice with general nonlocal interactions. The Hermiticity produces 16 effective Weyl fermions by species doubling, 8 left- and 8 right-handed. These are identified with a Standard Model generation. Only local non-anomalous gauge fields within the soup of general fluctuations can survive at long distances, and the degrees of freedom for gauge fields of an $SU(8)_L X SU(8)_R$ GUT are present. Standard Model gauge symmetries associate with particular species symmetries, for example change of QCD color associates with permutation of doubling status amongst space directions. Vierbein gravity is probably also generated. While fundamental Higgs fields are not possible, low fermion current masses can arise from chira...

  15. Generalized Linear Models with Applications in Engineering and the Sciences

    CERN Document Server

    Myers, Raymond H; Vining, G Geoffrey; Robinson, Timothy J

    2012-01-01

    Praise for the First Edition "The obvious enthusiasm of Myers, Montgomery, and Vining and their reliance on their many examples as a major focus of their pedagogy make Generalized Linear Models a joy to read. Every statistician working in any area of applied science should buy it and experience the excitement of these new approaches to familiar activities."-Technometrics Generalized Linear Models: With Applications in Engineering and the Sciences, Second Edition continues to provide a clear introduction to the theoretical foundations and key applications of generalized linear models (GLMs). Ma

  16. Modeling local item dependence with the hierarchical generalized linear model.

    Science.gov (United States)

    Jiao, Hong; Wang, Shudong; Kamata, Akihito

    2005-01-01

    Local item dependence (LID) can emerge when the test items are nested within common stimuli or item groups. This study proposes a three-level hierarchical generalized linear model (HGLM) to model LID when LID is due to such contextual effects. The proposed three-level HGLM was examined by analyzing simulated data sets and was compared with the Rasch-equivalent two-level HGLM that ignores such a nested structure of test items. The results demonstrated that the proposed model could capture LID and estimate its magnitude. Also, the two-level HGLM resulted in larger mean absolute differences between the true and the estimated item difficulties than those from the proposed three-level HGLM. Furthermore, it was demonstrated that the proposed three-level HGLM estimated the ability distribution variance unaffected by the LID magnitude, while the two-level HGLM with no LID consideration increasingly underestimated the ability variance as the LID magnitude increased.

  17. Bayesian Subset Modeling for High-Dimensional Generalized Linear Models

    KAUST Repository

    Liang, Faming

    2013-06-01

    This article presents a new prior setting for high-dimensional generalized linear models, which leads to a Bayesian subset regression (BSR) with the maximum a posteriori model approximately equivalent to the minimum extended Bayesian information criterion model. The consistency of the resulting posterior is established under mild conditions. Further, a variable screening procedure is proposed based on the marginal inclusion probability, which shares the same properties of sure screening and consistency with the existing sure independence screening (SIS) and iterative sure independence screening (ISIS) procedures. However, since the proposed procedure makes use of joint information from all predictors, it generally outperforms SIS and ISIS in real applications. This article also makes extensive comparisons of BSR with the popular penalized likelihood methods, including Lasso, elastic net, SIS, and ISIS. The numerical results indicate that BSR can generally outperform the penalized likelihood methods. The models selected by BSR tend to be sparser and, more importantly, of higher prediction ability. In addition, the performance of the penalized likelihood methods tends to deteriorate as the number of predictors increases, while this is not significant for BSR. Supplementary materials for this article are available online. © 2013 American Statistical Association.

  18. General expression for linear and nonlinear time series models

    Institute of Scientific and Technical Information of China (English)

    Ren HUANG; Feiyun XU; Ruwen CHEN

    2009-01-01

    The typical time series models such as ARMA, AR, and MA are founded on the normality and stationarity of a system and expressed by a linear difference equation; therefore, they are strictly limited to the linear system. However, some nonlinear factors are within the practical system; thus, it is difficult to fit the model for real systems with the above models. This paper proposes a general expression for linear and nonlinear auto-regressive time series models (GNAR). With the gradient optimization method and modified AIC information criteria integrated with the prediction error, the parameter estimation and order determination are achieved. The model simulation and experiments show that the GNAR model can accurately approximate to the dynamic characteristics of the most nonlinear models applied in academics and engineering. The modeling and prediction accuracy of the GNAR model is superior to the classical time series models. The proposed GNAR model is flexible and effective.

  19. Multivariate statistical modelling based on generalized linear models

    CERN Document Server

    Fahrmeir, Ludwig

    1994-01-01

    This book is concerned with the use of generalized linear models for univariate and multivariate regression analysis. Its emphasis is to provide a detailed introductory survey of the subject based on the analysis of real data drawn from a variety of subjects including the biological sciences, economics, and the social sciences. Where possible, technical details and proofs are deferred to an appendix in order to provide an accessible account for non-experts. Topics covered include: models for multi-categorical responses, model checking, time series and longitudinal data, random effects models, and state-space models. Throughout, the authors have taken great pains to discuss the underlying theoretical ideas in ways that relate well to the data at hand. As a result, numerous researchers whose work relies on the use of these models will find this an invaluable account to have on their desks. "The basic aim of the authors is to bring together and review a large part of recent advances in statistical modelling of m...

  20. A random effects generalized linear model for reliability compositive evaluation

    Institute of Scientific and Technical Information of China (English)

    2009-01-01

    This paper first proposes a random effects generalized linear model to evaluate the storage life of one kind of high reliable and small sample-sized products by combining multi-sources information of products coming from the same population but stored at different environments. The relevant algorithms are also provided. Simulation results manifest the soundness and effectiveness of the proposed model.

  1. Applying the General Linear Model to Repeated Measures Problems.

    Science.gov (United States)

    Pohlmann, John T.; McShane, Michael G.

    The purpose of this paper is to demonstrate the use of the general linear model (GLM) in problems with repeated measures on a dependent variable. Such problems include pretest-posttest designs, multitrial designs, and groups by trials designs. For each of these designs, a GLM analysis is demonstrated wherein full models are formed and restrictions…

  2. A random effects generalized linear model for reliability compositive evaluation

    Institute of Scientific and Technical Information of China (English)

    ZHAO Hui; YU Dan

    2009-01-01

    This paper first proposes a random effects generalized linear model to evaluate the storage life of one kind of high reliable and small sample-sized products by combining multi-sources information of products coming from the same population but stored at different environments.The relevant algorithms are also provided.Simulation results manifest the soundness and effectiveness of the proposed model.

  3. General Linear Models: An Integrated Approach to Statistics

    OpenAIRE

    Andrew Faulkner; Sylvain Chartier

    2008-01-01

    Generally, in psychology, the various statistical analyses are taught independently from each other. As a consequence, students struggle to learn new statistical analyses, in contexts that differ from their textbooks. This paper gives a short introduction to the general linear model (GLM), in which it is showed that ANOVA (one-way, factorial, repeated measure and analysis of covariance) is simply a multiple correlation/regression analysis (MCRA). Generalizations to other cases, such as multiv...

  4. General Linear Models: An Integrated Approach to Statistics

    Directory of Open Access Journals (Sweden)

    Andrew Faulkner

    2008-09-01

    Full Text Available Generally, in psychology, the various statistical analyses are taught independently from each other. As a consequence, students struggle to learn new statistical analyses, in contexts that differ from their textbooks. This paper gives a short introduction to the general linear model (GLM, in which it is showed that ANOVA (one-way, factorial, repeated measure and analysis of covariance is simply a multiple correlation/regression analysis (MCRA. Generalizations to other cases, such as multivariate and nonlinear analysis, are also discussed. It can easily be shown that every popular linear analysis can be derived from understanding MCRA.

  5. Dynamic generalized linear models for monitoring endemic diseases

    DEFF Research Database (Denmark)

    Lopes Antunes, Ana Carolina; Jensen, Dan Børge; Halasa, T.

    The objective was to use a Dynamic Generalized Linear Model (DGLM) based on abinomial distribution with a linear trend, for monitoring the PRRS (Porcine Reproductive and Respiratory Syndrome sero-prevalence in Danish swine herds. The DGLM was described and its performance for monitoring control...... in sero-prevalence. Based on this, it was possible to detect variations in the growth model component. This study is a proof-of-concept, demonstrating the use of DGLMs for monitoring endemic diseases. In addition, the principles stated might be useful in general research on monitoring and surveillance...

  6. The linear model and hypothesis a general unifying theory

    CERN Document Server

    Seber, George

    2015-01-01

    This book provides a concise and integrated overview of hypothesis testing in four important subject areas, namely linear and nonlinear models, multivariate analysis, and large sample theory. The approach used is a geometrical one based on the concept of projections and their associated idempotent matrices, thus largely avoiding the need to involve matrix ranks. It is shown that all the hypotheses encountered are either linear or asymptotically linear, and that all the underlying models used are either exactly or asymptotically linear normal models. This equivalence can be used, for example, to extend the concept of orthogonality in the analysis of variance to other models, and to show that the asymptotic equivalence of the likelihood ratio, Wald, and Score (Lagrange Multiplier) hypothesis tests generally applies.

  7. Estimation and variable selection for generalized additive partial linear models

    KAUST Repository

    Wang, Li

    2011-08-01

    We study generalized additive partial linear models, proposing the use of polynomial spline smoothing for estimation of nonparametric functions, and deriving quasi-likelihood based estimators for the linear parameters. We establish asymptotic normality for the estimators of the parametric components. The procedure avoids solving large systems of equations as in kernel-based procedures and thus results in gains in computational simplicity. We further develop a class of variable selection procedures for the linear parameters by employing a nonconcave penalized quasi-likelihood, which is shown to have an asymptotic oracle property. Monte Carlo simulations and an empirical example are presented for illustration. © Institute of Mathematical Statistics, 2011.

  8. A general and simple method for obtaining R2 from generalized linear mixed‐effects models

    National Research Council Canada - National Science Library

    Nakagawa, Shinichi; Schielzeth, Holger; O'Hara, Robert B

    2013-01-01

    The use of both linear and generalized linear mixed‐effects models ( LMM s and GLMM s) has become popular not only in social and medical sciences, but also in biological sciences, especially in the field of ecology and evolution...

  9. RF Circuit linearity optimization using a general weak nonlinearity model

    NARCIS (Netherlands)

    Cheng, W.; Oude Alink, M.S.; Annema, Anne J.; Croon, Jeroen A.; Nauta, Bram

    2012-01-01

    This paper focuses on optimizing the linearity in known RF circuits, by exploring the circuit design space that is usually available in today’s deep submicron CMOS technologies. Instead of using brute force numerical optimizers we apply a generalized weak nonlinearity model that only involves AC

  10. Regularization Paths for Generalized Linear Models via Coordinate Descent

    Directory of Open Access Journals (Sweden)

    Jerome Friedman

    2010-02-01

    Full Text Available We develop fast algorithms for estimation of generalized linear models with convex penalties. The models include linear regression, two-class logistic regression, and multi- nomial regression problems while the penalties include ℓ1 (the lasso, ℓ2 (ridge regression and mixtures of the two (the elastic net. The algorithms use cyclical coordinate descent, computed along a regularization path. The methods can handle large problems and can also deal efficiently with sparse features. In comparative timings we find that the new algorithms are considerably faster than competing methods.

  11. Practical likelihood analysis for spatial generalized linear mixed models

    DEFF Research Database (Denmark)

    Bonat, W. H.; Ribeiro, Paulo Justiniano

    2016-01-01

    We investigate an algorithm for maximum likelihood estimation of spatial generalized linear mixed models based on the Laplace approximation. We compare our algorithm with a set of alternative approaches for two datasets from the literature. The Rhizoctonia root rot and the Rongelap are, respectiv......We investigate an algorithm for maximum likelihood estimation of spatial generalized linear mixed models based on the Laplace approximation. We compare our algorithm with a set of alternative approaches for two datasets from the literature. The Rhizoctonia root rot and the Rongelap are...... of Laplace approximation include the computation of the maximized log-likelihood value, which can be used for model selection and tests, and the possibility to obtain realistic confidence intervals for model parameters based on profile likelihoods. The Laplace approximation also avoids the tuning...

  12. Residuals analysis of the generalized linear models for longitudinal data.

    Science.gov (United States)

    Chang, Y C

    2000-05-30

    The generalized estimation equation (GEE) method, one of the generalized linear models for longitudinal data, has been used widely in medical research. However, the related sensitivity analysis problem has not been explored intensively. One of the possible reasons for this was due to the correlated structure within the same subject. We showed that the conventional residuals plots for model diagnosis in longitudinal data could mislead a researcher into trusting the fitted model. A non-parametric method, named the Wald-Wolfowitz run test, was proposed to check the residuals plots both quantitatively and graphically. The rationale proposedin this paper is well illustrated with two real clinical studies in Taiwan.

  13. Estimation linear model using block generalized inverse of a matrix

    OpenAIRE

    Jasińska, Elżbieta; Preweda, Edward

    2013-01-01

    The work shows the principle of generalized linear model, point estimation, which can be used as a basis for determining the status of movements and deformations of engineering objects. The structural model can be put on any boundary conditions, for example, to ensure the continuity of the deformations. Estimation by the method of least squares was carried out taking into account the terms and conditions of the Gauss- Markov for quadratic forms stored using Lagrange function. The original sol...

  14. A Non-Gaussian Spatial Generalized Linear Latent Variable Model

    KAUST Repository

    Irincheeva, Irina

    2012-08-03

    We consider a spatial generalized linear latent variable model with and without normality distributional assumption on the latent variables. When the latent variables are assumed to be multivariate normal, we apply a Laplace approximation. To relax the assumption of marginal normality in favor of a mixture of normals, we construct a multivariate density with Gaussian spatial dependence and given multivariate margins. We use the pairwise likelihood to estimate the corresponding spatial generalized linear latent variable model. The properties of the resulting estimators are explored by simulations. In the analysis of an air pollution data set the proposed methodology uncovers weather conditions to be a more important source of variability than air pollution in explaining all the causes of non-accidental mortality excluding accidents. © 2012 International Biometric Society.

  15. Conditional likelihood inference in generalized linear mixed models.

    OpenAIRE

    Sartori, Nicola; Severini , T.A

    2002-01-01

    Consider a generalized linear model with a canonical link function, containing both fixed and random effects. In this paper, we consider inference about the fixed effects based on a conditional likelihood function. It is shown that this conditional likelihood function is valid for any distribution of the random effects and, hence, the resulting inferences about the fixed effects are insensitive to misspecification of the random effects distribution. Inferences based on the conditional likelih...

  16. Credibility analysis of risk classes by generalized linear model

    Science.gov (United States)

    Erdemir, Ovgucan Karadag; Sucu, Meral

    2016-06-01

    In this paper generalized linear model (GLM) and credibility theory which are frequently used in nonlife insurance pricing are combined for reliability analysis. Using full credibility standard, GLM is associated with limited fluctuation credibility approach. Comparison criteria such as asymptotic variance and credibility probability are used to analyze the credibility of risk classes. An application is performed by using one-year claim frequency data of a Turkish insurance company and results of credible risk classes are interpreted.

  17. Electromagnetic axial anomaly in a generalized linear sigma model

    Science.gov (United States)

    Fariborz, Amir H.; Jora, Renata

    2017-06-01

    We construct the electromagnetic anomaly effective term for a generalized linear sigma model with two chiral nonets, one with a quark-antiquark structure, the other one with a four-quark content. We compute in the leading order of this framework the decays into two photons of six pseudoscalars: π0(137 ), π0(1300 ), η (547 ), η (958 ), η (1295 ) and η (1760 ). Our results agree well with the available experimental data.

  18. A Graphical User Interface to Generalized Linear Models in MATLAB

    Directory of Open Access Journals (Sweden)

    Peter Dunn

    1999-07-01

    Full Text Available Generalized linear models unite a wide variety of statistical models in a common theoretical framework. This paper discusses GLMLAB-software that enables such models to be fitted in the popular mathematical package MATLAB. It provides a graphical user interface to the powerful MATLAB computational engine to produce a program that is easy to use but with many features, including offsets, prior weights and user-defined distributions and link functions. MATLAB's graphical capacities are also utilized in providing a number of simple residual diagnostic plots.

  19. Confidence Intervals of Variance Functions in Generalized Linear Model

    Institute of Scientific and Technical Information of China (English)

    Yong Zhou; Dao-ji Li

    2006-01-01

    In this paper we introduce an appealing nonparametric method for estimating variance and conditional variance functions in generalized linear models (GLMs), when designs are fixed points and random variables respectively. Bias-corrected confidence bands are proposed for the (conditional) variance by local linear smoothers. Nonparametric techniques are developed in deriving the bias-corrected confidence intervals of the (conditional) variance. The asymptotic distribution of the proposed estimator is established and show that the bias-corrected confidence bands asymptotically have the correct coverage properties. A small simulation is performed when unknown regression parameter is estimated by nonparametric quasi-likelihood. The results are also applicable to nonparametric autoregressive times series model with heteroscedastic conditional variance.

  20. Adaptive quasi-likelihood estimate in generalized linear models

    Institute of Scientific and Technical Information of China (English)

    CHEN Xia; CHEN Xiru

    2005-01-01

    This paper gives a thorough theoretical treatment on the adaptive quasilikelihood estimate of the parameters in the generalized linear models. The unknown covariance matrix of the response variable is estimated by the sample. It is shown that the adaptive estimator defined in this paper is asymptotically most efficient in the sense that it is asymptotic normal, and the covariance matrix of the limit distribution coincides with the one for the quasi-likelihood estimator for the case that the covariance matrix of the response variable is completely known.

  1. The Optimal Linear Combination of Multiple Predictors Under the Generalized Linear Models.

    Science.gov (United States)

    Jin, Hua; Lu, Ying

    2009-11-15

    Multiple alternative diagnostic tests for one disease are commonly available to clinicians. It's important to use all the good diagnostic predictors simultaneously to establish a new predictor with higher statistical utility. Under the generalized linear model for binary outcomes, the linear combination of multiple predictors in the link function is proved optimal in the sense that the area under the receiver operating characteristic (ROC) curve of this combination is the largest among all possible linear combination. The result was applied to analysis of the data from the Study of Osteoporotic Fractures (SOF) with comparison to Su and Liu's approach.

  2. Analysis of Robust Quasi-deviances for Generalized Linear Models

    Directory of Open Access Journals (Sweden)

    Eva Cantoni

    2004-04-01

    Full Text Available Generalized linear models (McCullagh and Nelder 1989 are a popular technique for modeling a large variety of continuous and discrete data. They assume that the response variables Yi , for i = 1, . . . , n, come from a distribution belonging to the exponential family, such that E[Yi ] = ?i and V[Yi ] = V (?i , and that ?i = g(?i = xiT?, where ? ? IR p is the vector of parameters, xi ? IR p, and g(. is the link function. The non-robustness of the maximum likelihood and the maximum quasi-likelihood estimators has been studied extensively in the literature. For model selection, the classical analysis-of-deviance approach shares the same bad robustness properties. To cope with this, Cantoni and Ronchetti (2001 propose a robust approach based on robust quasi-deviance functions for estimation and variable selection. We refer to that paper for a deeper discussion and the review of the literature.

  3. Generalized linear models with coarsened covariates: a practical Bayesian approach.

    Science.gov (United States)

    Johnson, Timothy R; Wiest, Michelle M

    2014-06-01

    Coarsened covariates are a common and sometimes unavoidable phenomenon encountered in statistical modeling. Covariates are coarsened when their values or categories have been grouped. This may be done to protect privacy or to simplify data collection or analysis when researchers are not aware of their drawbacks. Analyses with coarsened covariates based on ad hoc methods can compromise the validity of inferences. One valid method for accounting for a coarsened covariate is to use a marginal likelihood derived by summing or integrating over the unknown realizations of the covariate. However, algorithms for estimation based on this approach can be tedious to program and can be computationally expensive. These are significant obstacles to their use in practice. To overcome these limitations, we show that when expressed as a Bayesian probability model, a generalized linear model with a coarsened covariate can be posed as a tractable missing data problem where the missing data are due to censoring. We also show that this model is amenable to widely available general-purpose software for simulation-based inference for Bayesian probability models, providing researchers a very practical approach for dealing with coarsened covariates.

  4. Explicit estimating equations for semiparametric generalized linear latent variable models

    KAUST Repository

    Ma, Yanyuan

    2010-07-05

    We study generalized linear latent variable models without requiring a distributional assumption of the latent variables. Using a geometric approach, we derive consistent semiparametric estimators. We demonstrate that these models have a property which is similar to that of a sufficient complete statistic, which enables us to simplify the estimating procedure and explicitly to formulate the semiparametric estimating equations. We further show that the explicit estimators have the usual root n consistency and asymptotic normality. We explain the computational implementation of our method and illustrate the numerical performance of the estimators in finite sample situations via extensive simulation studies. The advantage of our estimators over the existing likelihood approach is also shown via numerical comparison. We employ the method to analyse a real data example from economics. © 2010 Royal Statistical Society.

  5. Adaptive Error Estimation in Linearized Ocean General Circulation Models

    Science.gov (United States)

    Chechelnitsky, Michael Y.

    1999-01-01

    Data assimilation methods are routinely used in oceanography. The statistics of the model and measurement errors need to be specified a priori. This study addresses the problem of estimating model and measurement error statistics from observations. We start by testing innovation based methods of adaptive error estimation with low-dimensional models in the North Pacific (5-60 deg N, 132-252 deg E) to TOPEX/POSEIDON (TIP) sea level anomaly data, acoustic tomography data from the ATOC project, and the MIT General Circulation Model (GCM). A reduced state linear model that describes large scale internal (baroclinic) error dynamics is used. The methods are shown to be sensitive to the initial guess for the error statistics and the type of observations. A new off-line approach is developed, the covariance matching approach (CMA), where covariance matrices of model-data residuals are "matched" to their theoretical expectations using familiar least squares methods. This method uses observations directly instead of the innovations sequence and is shown to be related to the MT method and the method of Fu et al. (1993). Twin experiments using the same linearized MIT GCM suggest that altimetric data are ill-suited to the estimation of internal GCM errors, but that such estimates can in theory be obtained using acoustic data. The CMA is then applied to T/P sea level anomaly data and a linearization of a global GFDL GCM which uses two vertical modes. We show that the CMA method can be used with a global model and a global data set, and that the estimates of the error statistics are robust. We show that the fraction of the GCM-T/P residual variance explained by the model error is larger than that derived in Fukumori et al.(1999) with the method of Fu et al.(1993). Most of the model error is explained by the barotropic mode. However, we find that impact of the change in the error statistics on the data assimilation estimates is very small. This is explained by the large

  6. dglars: An R Package to Estimate Sparse Generalized Linear Models

    Directory of Open Access Journals (Sweden)

    Luigi Augugliaro

    2014-09-01

    Full Text Available dglars is a publicly available R package that implements the method proposed in Augugliaro, Mineo, and Wit (2013, developed to study the sparse structure of a generalized linear model. This method, called dgLARS, is based on a differential geometrical extension of the least angle regression method proposed in Efron, Hastie, Johnstone, and Tibshirani (2004. The core of the dglars package consists of two algorithms implemented in Fortran 90 to efficiently compute the solution curve: a predictor-corrector algorithm, proposed in Augugliaro et al. (2013, and a cyclic coordinate descent algorithm, proposed in Augugliaro, Mineo, and Wit (2012. The latter algorithm, as shown here, is significantly faster than the predictor-corrector algorithm. For comparison purposes, we have implemented both algorithms.

  7. Bayesian inference for generalized linear models for spiking neurons

    Directory of Open Access Journals (Sweden)

    Sebastian Gerwinn

    2010-05-01

    Full Text Available Generalized Linear Models (GLMs are commonly used statistical methods for modelling the relationship between neural population activity and presented stimuli. When the dimension of the parameter space is large, strong regularization has to be used in order to fit GLMs to datasets of realistic size without overfitting. By imposing properly chosen priors over parameters, Bayesian inference provides an effective and principled approach for achieving regularization. Here we show how the posterior distribution over model parameters of GLMs can be approximated by a Gaussian using the Expectation Propagation algorithm. In this way, we obtain an estimate of the posterior mean and posterior covariance, allowing us to calculate Bayesian confidence intervals that characterize the uncertainty about the optimal solution. From the posterior we also obtain a different point estimate, namely the posterior mean as opposed to the commonly used maximum a posteriori estimate. We systematically compare the different inference techniques on simulated as well as on multi-electrode recordings of retinal ganglion cells, and explore the effects of the chosen prior and the performance measure used. We find that good performance can be achieved by choosing an Laplace prior together with the posterior mean estimate.

  8. Transferability of regional permafrost disturbance susceptibility modelling using generalized linear and generalized additive models

    Science.gov (United States)

    Rudy, Ashley C. A.; Lamoureux, Scott F.; Treitz, Paul; van Ewijk, Karin Y.

    2016-07-01

    To effectively assess and mitigate risk of permafrost disturbance, disturbance-prone areas can be predicted through the application of susceptibility models. In this study we developed regional susceptibility models for permafrost disturbances using a field disturbance inventory to test the transferability of the model to a broader region in the Canadian High Arctic. Resulting maps of susceptibility were then used to explore the effect of terrain variables on the occurrence of disturbances within this region. To account for a large range of landscape characteristics, the model was calibrated using two locations: Sabine Peninsula, Melville Island, NU, and Fosheim Peninsula, Ellesmere Island, NU. Spatial patterns of disturbance were predicted with a generalized linear model (GLM) and generalized additive model (GAM), each calibrated using disturbed and randomized undisturbed locations from both locations and GIS-derived terrain predictor variables including slope, potential incoming solar radiation, wetness index, topographic position index, elevation, and distance to water. Each model was validated for the Sabine and Fosheim Peninsulas using independent data sets while the transferability of the model to an independent site was assessed at Cape Bounty, Melville Island, NU. The regional GLM and GAM validated well for both calibration sites (Sabine and Fosheim) with the area under the receiver operating curves (AUROC) > 0.79. Both models were applied directly to Cape Bounty without calibration and validated equally with AUROC's of 0.76; however, each model predicted disturbed and undisturbed samples differently. Additionally, the sensitivity of the transferred model was assessed using data sets with different sample sizes. Results indicated that models based on larger sample sizes transferred more consistently and captured the variability within the terrain attributes in the respective study areas. Terrain attributes associated with the initiation of disturbances were

  9. Generalized linear mixed models modern concepts, methods and applications

    CERN Document Server

    Stroup, Walter W

    2012-01-01

    PART I The Big PictureModeling BasicsWhat Is a Model?Two Model Forms: Model Equation and Probability DistributionTypes of Model EffectsWriting Models in Matrix FormSummary: Essential Elements for a Complete Statement of the ModelDesign MattersIntroductory Ideas for Translating Design and Objectives into ModelsDescribing ""Data Architecture"" to Facilitate Model SpecificationFrom Plot Plan to Linear PredictorDistribution MattersMore Complex Example: Multiple Factors with Different Units of ReplicationSetting the StageGoals for Inference with Models: OverviewBasic Tools of InferenceIssue I: Data

  10. Generalized Functional Linear Models With Semiparametric Single-Index Interactions

    KAUST Repository

    Li, Yehua

    2010-06-01

    We introduce a new class of functional generalized linear models, where the response is a scalar and some of the covariates are functional. We assume that the response depends on multiple covariates, a finite number of latent features in the functional predictor, and interaction between the two. To achieve parsimony, the interaction between the multiple covariates and the functional predictor is modeled semiparametrically with a single-index structure. We propose a two step estimation procedure based on local estimating equations, and investigate two situations: (a) when the basis functions are pre-determined, e.g., Fourier or wavelet basis functions and the functional features of interest are known; and (b) when the basis functions are data driven, such as with functional principal components. Asymptotic properties are developed. Notably, we show that when the functional features are data driven, the parameter estimates have an increased asymptotic variance, due to the estimation error of the basis functions. Our methods are illustrated with a simulation study and applied to an empirical data set, where a previously unknown interaction is detected. Technical proofs of our theoretical results are provided in the online supplemental materials.

  11. Generalized linear model for estimation of missing daily rainfall data

    Science.gov (United States)

    Rahman, Nurul Aishah; Deni, Sayang Mohd; Ramli, Norazan Mohamed

    2017-04-01

    The analysis of rainfall data with no missingness is vital in various applications including climatological, hydrological and meteorological study. The issue of missing data is a serious concern since it could introduce bias and lead to misleading conclusions. In this study, five imputation methods including simple arithmetic average, normal ratio method, inverse distance weighting method, correlation coefficient weighting method and geographical coordinate were used to estimate the missing data. However, these imputation methods ignored the seasonality in rainfall dataset which could give more reliable estimation. Thus this study is aimed to estimate the missingness in daily rainfall data by using generalized linear model with gamma and Fourier series as the link function and smoothing technique, respectively. Forty years daily rainfall data for the period from 1975 until 2014 which consists of seven stations at Kelantan region were selected for the analysis. The findings indicated that the imputation methods could provide more accurate estimation values based on the least mean absolute error, root mean squared error and coefficient of variation root mean squared error when seasonality in the dataset are considered.

  12. Generalized linear longitudinal mixed models with linear covariance structure and multiplicative random effects

    DEFF Research Database (Denmark)

    Holst, René; Jørgensen, Bent

    2015-01-01

    The paper proposes a versatile class of multiplicative generalized linear longitudinal mixed models (GLLMM) with additive dispersion components, based on explicit modelling of the covariance structure. The class incorporates a longitudinal structure into the random effects models and retains...... a marginal as well as a conditional interpretation. The estimation procedure is based on a computationally efficient quasi-score method for the regression parameters combined with a REML-like bias-corrected Pearson estimating function for the dispersion and correlation parameters. This avoids...... the multidimensional integral of the conventional GLMM likelihood and allows an extension of the robust empirical sandwich estimator for use with both association and regression parameters. The method is applied to a set of otholit data, used for age determination of fish....

  13. Maximum Likelihood in a Generalized Linear Finite Mixture Model by Using the EM Algorithm

    NARCIS (Netherlands)

    Jansen, R.C.

    A generalized linear finite mixture model and an EM algorithm to fit the model to data are described. By this approach the finite mixture model is embedded within the general framework of generalized linear models (GLMs). Implementation of the proposed EM algorithm can be readily done in statistical

  14. Item Response Theory Using Hierarchical Generalized Linear Models

    Directory of Open Access Journals (Sweden)

    Hamdollah Ravand

    2015-03-01

    Full Text Available Multilevel models (MLMs are flexible in that they can be employed to obtain item and person parameters, test for differential item functioning (DIF and capture both local item and person dependence. Papers on the MLM analysis of item response data have focused mostly on theoretical issues where applications have been add-ons to simulation studies with a methodological focus. Although the methodological direction was necessary as a first step to show how MLMs can be utilized and extended to model item response data, the emphasis needs to be shifted towards providing evidence on how applications of MLMs in educational testing can provide the benefits that have been promised. The present study uses foreign language reading comprehension data to illustrate application of hierarchical generalized models to estimate person and item parameters, differential item functioning (DIF, and local person dependence in a three-level model.

  15. Bayesian generalized linear mixed modeling of Tuberculosis using informative priors.

    Science.gov (United States)

    Ojo, Oluwatobi Blessing; Lougue, Siaka; Woldegerima, Woldegebriel Assefa

    2017-01-01

    TB is rated as one of the world's deadliest diseases and South Africa ranks 9th out of the 22 countries with hardest hit of TB. Although many pieces of research have been carried out on this subject, this paper steps further by inculcating past knowledge into the model, using Bayesian approach with informative prior. Bayesian statistics approach is getting popular in data analyses. But, most applications of Bayesian inference technique are limited to situations of non-informative prior, where there is no solid external information about the distribution of the parameter of interest. The main aim of this study is to profile people living with TB in South Africa. In this paper, identical regression models are fitted for classical and Bayesian approach both with non-informative and informative prior, using South Africa General Household Survey (GHS) data for the year 2014. For the Bayesian model with informative prior, South Africa General Household Survey dataset for the year 2011 to 2013 are used to set up priors for the model 2014.

  16. Admissible Estimators in the General Multivariate Linear Model with Respect to Inequality Restricted Parameter Set

    Directory of Open Access Journals (Sweden)

    Liu Gang

    2009-01-01

    Full Text Available By using the methods of linear algebra and matrix inequality theory, we obtain the characterization of admissible estimators in the general multivariate linear model with respect to inequality restricted parameter set. In the classes of homogeneous and general linear estimators, the necessary and suffcient conditions that the estimators of regression coeffcient function are admissible are established.

  17. Generalized linear models for categorical and continuous limited dependent variables

    CERN Document Server

    Smithson, Michael

    2013-01-01

    Introduction and OverviewThe Nature of Limited Dependent VariablesOverview of GLMsEstimation Methods and Model EvaluationOrganization of This BookDiscrete VariablesBinary VariablesLogistic RegressionThe Binomial GLMEstimation Methods and IssuesAnalyses in R and StataExercisesNominal Polytomous VariablesMultinomial Logit ModelConditional Logit and Choice ModelsMultinomial Processing Tree ModelsEstimation Methods and Model EvaluationAnalyses in R and StataExercisesOrdinal Categorical VariablesModeling Ordinal Variables: Common Practice versus Best PracticeOrdinal Model AlternativesCumulative Mod

  18. Predicting infectivity of Arbuscular Mycorrhizal fungi from soil variables using Generalized Additive Models and Generalized Linear Models

    Directory of Open Access Journals (Sweden)

    IRNANDA AIKO FIFI DJUUNA

    2010-07-01

    Full Text Available Djuuna IAF, Abbott LK, Van Niel K (2010 Predicting infectivity of Arbuscular Mycorrhizal fungi from soil variables using Generalized Additive Models and Generalized Linear Models. Biodiversitas 11: 145-150. The objective of this study was to predict the infectivity of arbuscular mycorrhizal fungi (AM fungi, from field soil based on soil properties and land use history using generalized additive models (GAMs and generalized linear models (GLMs. A total of 291 soil samples from a farm in Western Australia near Wickepin were collected and used in this study. Nine soil properties, including elevation, pH, EC, total C, total N, P, K, microbial biomass carbon, and soil texture, and land use history of the farm were used as independent variables, while the percentage of root length colonized (%RLC was used as the dependent variable. GAMs parameterized for the percent of root length colonized suggested skewed quadratic responses to soil pH and microbial biomass carbon; cubic responses to elevation and soil K; and linear responses to soil P, EC and total C. The strength of the relationship between percent root length colonized by AM fungi and environmental variables showed that only elevation, total C and microbial biomass carbon had strong relationships. In general, GAMs and GLMs models confirmed the strong relationship between infectivity of AM fungi (assessed in a glasshouse bioassay for soil collected in summer prior to the first rain of the season and soil properties.

  19. Hierarchical Shrinkage Priors and Model Fitting for High-dimensional Generalized Linear Models

    Science.gov (United States)

    Yi, Nengjun; Ma, Shuangge

    2013-01-01

    Genetic and other scientific studies routinely generate very many predictor variables, which can be naturally grouped, with predictors in the same groups being highly correlated. It is desirable to incorporate the hierarchical structure of the predictor variables into generalized linear models for simultaneous variable selection and coefficient estimation. We propose two prior distributions: hierarchical Cauchy and double-exponential distributions, on coefficients in generalized linear models. The hierarchical priors include both variable-specific and group-specific tuning parameters, thereby not only adopting different shrinkage for different coefficients and different groups but also providing a way to pool the information within groups. We fit generalized linear models with the proposed hierarchical priors by incorporating flexible expectation-maximization (EM) algorithms into the standard iteratively weighted least squares as implemented in the general statistical package R. The methods are illustrated with data from an experiment to identify genetic polymorphisms for survival of mice following infection with Listeria monocytogenes. The performance of the proposed procedures is further assessed via simulation studies. The methods are implemented in a freely available R package BhGLM (http://www.ssg.uab.edu/bhglm/). PMID:23192052

  20. Model Checking for a General Linear Model with Nonignorable Missing Covariates

    Institute of Scientific and Technical Information of China (English)

    Zhi-hua SUN; Wai-Cheung IP; Heung WONG

    2012-01-01

    In this paper,we investigate the model checking problem for a general linear model with nonignorable missing covariates.We show that,without any parametric model assumption for the response probability,the least squares method yields consistent estimators for the linear model even if only the complete data are applied.This makes it feasible to propose two testing procedures for the corresponding model checking problem:a score type lack-of-fit test and a test based on the empirical process.The asymptotic properties of the test statistics are investigated.Both tests are shown to have asymptotic power 1 for local alternatives converging to the null at the rate n-(r),0 ≤ (r) < 1/2.Simulation results show that both tests perform satisfactorily.

  1. Bayesian model choice and information criteria in sparse generalized linear models

    CERN Document Server

    Foygel, Rina

    2011-01-01

    We consider Bayesian model selection in generalized linear models that are high-dimensional, with the number of covariates p being large relative to the sample size n, but sparse in that the number of active covariates is small compared to p. Treating the covariates as random and adopting an asymptotic scenario in which p increases with n, we show that Bayesian model selection using certain priors on the set of models is asymptotically equivalent to selecting a model using an extended Bayesian information criterion. Moreover, we prove that the smallest true model is selected by either of these methods with probability tending to one. Having addressed random covariates, we are also able to give a consistency result for pseudo-likelihood approaches to high-dimensional sparse graphical modeling. Experiments on real data demonstrate good performance of the extended Bayesian information criterion for regression and for graphical models.

  2. Univariate and multivariate general linear models theory and applications with SAS

    CERN Document Server

    Kim, Kevin

    2006-01-01

    Reviewing the theory of the general linear model (GLM) using a general framework, Univariate and Multivariate General Linear Models: Theory and Applications with SAS, Second Edition presents analyses of simple and complex models, both univariate and multivariate, that employ data sets from a variety of disciplines, such as the social and behavioral sciences.With revised examples that include options available using SAS 9.0, this expanded edition divides theory from applications within each chapter. Following an overview of the GLM, the book introduces unrestricted GLMs to analyze multiple regr

  3. Regression Is a Univariate General Linear Model Subsuming Other Parametric Methods as Special Cases.

    Science.gov (United States)

    Vidal, Sherry

    Although the concept of the general linear model (GLM) has existed since the 1960s, other univariate analyses such as the t-test and the analysis of variance models have remained popular. The GLM produces an equation that minimizes the mean differences of independent variables as they are related to a dependent variable. From a computer printout…

  4. The microcomputer scientific software series 2: general linear model--regression.

    Science.gov (United States)

    Harold M. Rauscher

    1983-01-01

    The general linear model regression (GLMR) program provides the microcomputer user with a sophisticated regression analysis capability. The output provides a regression ANOVA table, estimators of the regression model coefficients, their confidence intervals, confidence intervals around the predicted Y-values, residuals for plotting, a check for multicollinearity, a...

  5. Asymptotic normality and strong consistency of maximum quasi-likelihood estimates in generalized linear models

    Institute of Scientific and Technical Information of China (English)

    YIN; Changming; ZHAO; Lincheng; WEI; Chengdong

    2006-01-01

    In a generalized linear model with q × 1 responses, the bounded and fixed (or adaptive) p × q regressors Zi and the general link function, under the most general assumption on the minimum eigenvalue of ∑ni=1 ZiZ'i, the moment condition on responses as weak as possible and the other mild regular conditions, we prove that the maximum quasi-likelihood estimates for the regression parameter vector are asymptotically normal and strongly consistent.

  6. Generalized linear models with random effects unified analysis via H-likelihood

    CERN Document Server

    Lee, Youngjo; Pawitan, Yudi

    2006-01-01

    Since their introduction in 1972, generalized linear models (GLMs) have proven useful in the generalization of classical normal models. Presenting methods for fitting GLMs with random effects to data, Generalized Linear Models with Random Effects: Unified Analysis via H-likelihood explores a wide range of applications, including combining information over trials (meta-analysis), analysis of frailty models for survival data, genetic epidemiology, and analysis of spatial and temporal models with correlated errors.Written by pioneering authorities in the field, this reference provides an introduction to various theories and examines likelihood inference and GLMs. The authors show how to extend the class of GLMs while retaining as much simplicity as possible. By maximizing and deriving other quantities from h-likelihood, they also demonstrate how to use a single algorithm for all members of the class, resulting in a faster algorithm as compared to existing alternatives. Complementing theory with examples, many of...

  7. Semiparametric Analysis of Heterogeneous Data Using Varying-Scale Generalized Linear Models.

    Science.gov (United States)

    Xie, Minge; Simpson, Douglas G; Carroll, Raymond J

    2008-01-01

    This article describes a class of heteroscedastic generalized linear regression models in which a subset of the regression parameters are rescaled nonparametrically, and develops efficient semiparametric inferences for the parametric components of the models. Such models provide a means to adapt for heterogeneity in the data due to varying exposures, varying levels of aggregation, and so on. The class of models considered includes generalized partially linear models and nonparametrically scaled link function models as special cases. We present an algorithm to estimate the scale function nonparametrically, and obtain asymptotic distribution theory for regression parameter estimates. In particular, we establish that the asymptotic covariance of the semiparametric estimator for the parametric part of the model achieves the semiparametric lower bound. We also describe bootstrap-based goodness-of-scale test. We illustrate the methodology with simulations, published data, and data from collaborative research on ultrasound safety.

  8. On the distribution of discounted loss reserves using generalized linear models

    NARCIS (Netherlands)

    Hoedemakers, T.; Beirlant, J.; Goovaerts, M.J.; Dhaene, J.

    2005-01-01

    Renshaw and Verrall [11] specified the generalized linear model (GLM) underlying the chain-ladder technique and suggested some other GLMs which might be useful in claims reserving. The purpose of this paper is to construct bounds for the discounted loss reserve within the framework of GLMs. Exact

  9. Large-Sample Theory for Generalized Linear Models with Non-natural Link and Random Variates

    Institute of Scientific and Technical Information of China (English)

    Jie-li Ding; Xi-ru Chen

    2006-01-01

    For generalized linear models (GLM), in the case that the regressors are stochastic and have different distributions and the observations of the responses may have different dimensionality, the asymptotic theory of the maximum likelihood estimate (MLE) of the parameters are studied under the assumption of a non-natural link function.

  10. Asymptotic Properties of the Maximum Likelihood Estimate in Generalized Linear Models with Stochastic Regressors

    Institute of Scientific and Technical Information of China (English)

    Jie Li DING; Xi Ru CHEN

    2006-01-01

    For generalized linear models (GLM), in case the regressors are stochastic and have different distributions, the asymptotic properties of the maximum likelihood estimate (MLE)(β^)n of the parameters are studied. Under reasonable conditions, we prove the weak, strong consistency and asymptotic normality of(β^)n.

  11. Rate of strong consistency of quasi maximum likelihood estimate in generalized linear models

    Institute of Scientific and Technical Information of China (English)

    2004-01-01

    [1]McCullagh, P., Nelder, J. A., Generalized Linear Models, New York: Chapman and Hall, 1989.[2]Wedderbum, R. W. M., Quasi-likelihood functions, generalized linear models and Gauss-Newton method,Biometrika, 1974, 61:439-447.[3]Fahrmeir, L., Maximum likelihood estimation in misspecified generalized linear models, Statistics, 1990, 21:487-502.[4]Fahrmeir, L., Kaufmann, H., Consistency and asymptotic normality of the maximum likelihood estimator in generalized linear models, Ann. Statist., 1985, 13: 342-368.[5]Melder, J. A., Pregibon, D., An extended quasi-likelihood function, Biometrika, 1987, 74: 221-232.[6]Bennet, G., Probability inequalities for the sum of independent random variables, JASA, 1962, 57: 33-45.[7]Stout, W. F., Almost Sure Convergence, New York:Academic Press, 1974.[8]Petrov, V, V., Sums of Independent Random Variables, Berlin, New York: Springer-Verlag, 1975.

  12. A differential-geometric approach to generalized linear models with grouped predictors

    NARCIS (Netherlands)

    Augugliaro, Luigi; Mineo, Angelo M.; Wit, Ernst C.

    2016-01-01

    We propose an extension of the differential-geometric least angle regression method to perform sparse group inference in a generalized linear model. An efficient algorithm is proposed to compute the solution curve. The proposed group differential-geometric least angle regression method has important

  13. Estimate of influenza cases using generalized linear, additive and mixed models.

    Science.gov (United States)

    Oviedo, Manuel; Domínguez, Ángela; Pilar Muñoz, M

    2015-01-01

    We investigated the relationship between reported cases of influenza in Catalonia (Spain). Covariates analyzed were: population, age, data of report of influenza, and health region during 2010-2014 using data obtained from the SISAP program (Institut Catala de la Salut - Generalitat of Catalonia). Reported cases were related with the study of covariates using a descriptive analysis. Generalized Linear Models, Generalized Additive Models and Generalized Additive Mixed Models were used to estimate the evolution of the transmission of influenza. Additive models can estimate non-linear effects of the covariates by smooth functions; and mixed models can estimate data dependence and variability in factor variables using correlations structures and random effects, respectively. The incidence rate of influenza was calculated as the incidence per 100 000 people. The mean rate was 13.75 (range 0-27.5) in the winter months (December, January, February) and 3.38 (range 0-12.57) in the remaining months. Statistical analysis showed that Generalized Additive Mixed Models were better adapted to the temporal evolution of influenza (serial correlation 0.59) than classical linear models.

  14. Generalized Linear Covariance Analysis

    Science.gov (United States)

    Carpenter, James R.; Markley, F. Landis

    2014-01-01

    This talk presents a comprehensive approach to filter modeling for generalized covariance analysis of both batch least-squares and sequential estimators. We review and extend in two directions the results of prior work that allowed for partitioning of the state space into solve-for'' and consider'' parameters, accounted for differences between the formal values and the true values of the measurement noise, process noise, and textita priori solve-for and consider covariances, and explicitly partitioned the errors into subspaces containing only the influence of the measurement noise, process noise, and solve-for and consider covariances. In this work, we explicitly add sensitivity analysis to this prior work, and relax an implicit assumption that the batch estimator's epoch time occurs prior to the definitive span. We also apply the method to an integrated orbit and attitude problem, in which gyro and accelerometer errors, though not estimated, influence the orbit determination performance. We illustrate our results using two graphical presentations, which we call the variance sandpile'' and the sensitivity mosaic,'' and we compare the linear covariance results to confidence intervals associated with ensemble statistics from a Monte Carlo analysis.

  15. LINEAR LAYER AND GENERALIZED REGRESSION COMPUTATIONAL INTELLIGENCE MODELS FOR PREDICTING SHELF LIFE OF PROCESSED CHEESE

    Directory of Open Access Journals (Sweden)

    S. Goyal

    2012-03-01

    Full Text Available This paper highlights the significance of computational intelligence models for predicting shelf life of processed cheese stored at 7-8 g.C. Linear Layer and Generalized Regression models were developed with input parameters: Soluble nitrogen, pH, Standard plate count, Yeast & mould count, Spores, and sensory score as output parameter. Mean Square Error, Root Mean Square Error, Coefficient of Determination and Nash - Sutcliffo Coefficient were used in order to compare the prediction ability of the models. The study revealed that Generalized Regression computational intelligence models are quite effective in predicting the shelf life of processed cheese stored at 7-8 g.C.

  16. Interactions in Generalized Linear Models: Theoretical Issues and an Application to Personal Vote-Earning Attributes

    Directory of Open Access Journals (Sweden)

    Tsung-han Tsai

    2013-05-01

    Full Text Available There is some confusion in political science, and the social sciences in general, about the meaning and interpretation of interaction effects in models with non-interval, non-normal outcome variables. Often these terms are casually thrown into a model specification without observing that their presence fundamentally changes the interpretation of the resulting coefficients. This article explains the conditional nature of reported coefficients in models with interactions, defining the necessarily different interpretation required by generalized linear models. Methodological issues are illustrated with an application to voter information structured by electoral systems and resulting legislative behavior and democratic representation in comparative politics.

  17. Generalized model of double random phase encoding based on linear algebra

    Science.gov (United States)

    Nakano, Kazuya; Takeda, Masafumi; Suzuki, Hiroyuki; Yamaguchi, Masahiro

    2013-01-01

    We propose a generalized model for double random phase encoding (DRPE) based on linear algebra. We defined the DRPE procedure in six steps. The first three steps form an encryption procedure, while the later three steps make up a decryption procedure. We noted that the first (mapping) and second (transform) steps can be generalized. As an example of this generalization, we used 3D mapping and a transform matrix, which is a combination of a discrete cosine transform and two permutation matrices. Finally, we investigated the sensitivity of the proposed model to errors in the decryption key.

  18. A cautionary note on generalized linear models for covariance of unbalanced longitudinal data

    KAUST Repository

    Huang, Jianhua Z.

    2012-03-01

    Missing data in longitudinal studies can create enormous challenges in data analysis when coupled with the positive-definiteness constraint on a covariance matrix. For complete balanced data, the Cholesky decomposition of a covariance matrix makes it possible to remove the positive-definiteness constraint and use a generalized linear model setup to jointly model the mean and covariance using covariates (Pourahmadi, 2000). However, this approach may not be directly applicable when the longitudinal data are unbalanced, as coherent regression models for the dependence across all times and subjects may not exist. Within the existing generalized linear model framework, we show how to overcome this and other challenges by embedding the covariance matrix of the observed data for each subject in a larger covariance matrix and employing the familiar EM algorithm to compute the maximum likelihood estimates of the parameters and their standard errors. We illustrate and assess the methodology using real data sets and simulations. © 2011 Elsevier B.V.

  19. Bayesian prediction of spatial count data using generalized linear mixed models

    DEFF Research Database (Denmark)

    Christensen, Ole Fredslund; Waagepetersen, Rasmus Plenge

    2002-01-01

    Spatial weed count data are modeled and predicted using a generalized linear mixed model combined with a Bayesian approach and Markov chain Monte Carlo. Informative priors for a data set with sparse sampling are elicited using a previously collected data set with extensive sampling. Furthermore, we...... demonstrate that so-called Langevin-Hastings updates are useful for efficient simulation of the posterior distributions, and we discuss computational issues concerning prediction....

  20. Strong consistency of maximum quasi-likelihood estimates in generalized linear models

    Institute of Scientific and Technical Information of China (English)

    YiN; Changming; ZHAO; Lincheng

    2005-01-01

    In a generalized linear model with q × 1 responses, bounded and fixed p × qregressors Zi and general link function, under the most general assumption on the mini-mum eigenvalue of∑ni=1n ZiZ'i, the moment condition on responses as weak as possibleand other mild regular conditions, we prove that with probability one, the quasi-likelihoodequation has a solutionβn for all large sample size n, which converges to the true regres-sion parameterβo. This result is an essential improvement over the relevant results in literature.

  1. Bayesian Variable Selection and Computation for Generalized Linear Models with Conjugate Priors.

    Science.gov (United States)

    Chen, Ming-Hui; Huang, Lan; Ibrahim, Joseph G; Kim, Sungduk

    2008-07-01

    In this paper, we consider theoretical and computational connections between six popular methods for variable subset selection in generalized linear models (GLM's). Under the conjugate priors developed by Chen and Ibrahim (2003) for the generalized linear model, we obtain closed form analytic relationships between the Bayes factor (posterior model probability), the Conditional Predictive Ordinate (CPO), the L measure, the Deviance Information Criterion (DIC), the Aikiake Information Criterion (AIC), and the Bayesian Information Criterion (BIC) in the case of the linear model. Moreover, we examine computational relationships in the model space for these Bayesian methods for an arbitrary GLM under conjugate priors as well as examine the performance of the conjugate priors of Chen and Ibrahim (2003) in Bayesian variable selection. Specifically, we show that once Markov chain Monte Carlo (MCMC) samples are obtained from the full model, the four Bayesian criteria can be simultaneously computed for all possible subset models in the model space. We illustrate our new methodology with a simulation study and a real dataset.

  2. Linear Models

    CERN Document Server

    Searle, Shayle R

    2012-01-01

    This 1971 classic on linear models is once again available--as a Wiley Classics Library Edition. It features material that can be understood by any statistician who understands matrix algebra and basic statistical methods.

  3. Vector generalized linear and additive models with an implementation in R

    CERN Document Server

    Yee, Thomas W

    2015-01-01

    This book presents a statistical framework that expands generalized linear models (GLMs) for regression modelling. The framework shared in this book allows analyses based on many semi-traditional applied statistics models to be performed as a coherent whole. This is possible through the approximately half-a-dozen major classes of statistical models included in the book and the software infrastructure component, which makes the models easily operable.    The book’s methodology and accompanying software (the extensive VGAM R package) are directed at these limitations, and this is the first time the methodology and software are covered comprehensively in one volume. Since their advent in 1972, GLMs have unified important distributions under a single umbrella with enormous implications. The demands of practical data analysis, however, require a flexibility that GLMs do not have. Data-driven GLMs, in the form of generalized additive models (GAMs), are also largely confined to the exponential family. This book ...

  4. ASYMPTOTIC NORMALITY OF QUASI MAXIMUM LIKELIHOOD ESTIMATE IN GENERALIZED LINEAR MODELS

    Institute of Scientific and Technical Information of China (English)

    YUE LI; CHEN XIRU

    2005-01-01

    For the Generalized Linear Model (GLM), under some conditions including that the specification of the expectation is correct, it is shown that the Quasi Maximum Likelihood Estimate (QMLE) of the parameter-vector is asymptotic normal. It is also shown that the asymptotic covariance matrix of the QMLE reaches its minimum (in the positive-definte sense) in case that the specification of the covariance matrix is correct.

  5. An Entropy-Based Approach to Path Analysis of Structural Generalized Linear Models: A Basic Idea

    Directory of Open Access Journals (Sweden)

    Nobuoki Eshima

    2015-07-01

    Full Text Available A path analysis method for causal systems based on generalized linear models is proposed by using entropy. A practical example is introduced, and a brief explanation of the entropy coefficient of determination is given. Direct and indirect effects of explanatory variables are discussed as log odds ratios, i.e., relative information, and a method for summarizing the effects is proposed. The example dataset is re-analyzed by using the method.

  6. A generalized concordance correlation coefficient based on the variance components generalized linear mixed models for overdispersed count data.

    Science.gov (United States)

    Carrasco, Josep L

    2010-09-01

    The classical concordance correlation coefficient (CCC) to measure agreement among a set of observers assumes data to be distributed as normal and a linear relationship between the mean and the subject and observer effects. Here, the CCC is generalized to afford any distribution from the exponential family by means of the generalized linear mixed models (GLMMs) theory and applied to the case of overdispersed count data. An example of CD34+ cell count data is provided to show the applicability of the procedure. In the latter case, different CCCs are defined and applied to the data by changing the GLMM that fits the data. A simulation study is carried out to explore the behavior of the procedure with a small and moderate sample size.

  7. Normality of raw data in general linear models: The most widespread myth in statistics

    Science.gov (United States)

    Kery, Marc; Hatfield, Jeff S.

    2003-01-01

    In years of statistical consulting for ecologists and wildlife biologists, by far the most common misconception we have come across has been the one about normality in general linear models. These comprise a very large part of the statistical models used in ecology and include t tests, simple and multiple linear regression, polynomial regression, and analysis of variance (ANOVA) and covariance (ANCOVA). There is a widely held belief that the normality assumption pertains to the raw data rather than to the model residuals. We suspect that this error may also occur in countless published studies, whenever the normality assumption is tested prior to analysis. This may lead to the use of nonparametric alternatives (if there are any), when parametric tests would indeed be appropriate, or to use of transformations of raw data, which may introduce hidden assumptions such as multiplicative effects on the natural scale in the case of log-transformed data. Our aim here is to dispel this myth. We very briefly describe relevant theory for two cases of general linear models to show that the residuals need to be normally distributed if tests requiring normality are to be used, such as t and F tests. We then give two examples demonstrating that the distribution of the response variable may be nonnormal, and yet the residuals are well behaved. We do not go into the issue of how to test normality; instead we display the distributions of response variables and residuals graphically.

  8. On the Generalization of the Timoshenko Beam Model Based on the Micropolar Linear Theory: Static Case

    Directory of Open Access Journals (Sweden)

    Andrea Nobili

    2015-01-01

    Full Text Available Three generalizations of the Timoshenko beam model according to the linear theory of micropolar elasticity or its special cases, that is, the couple stress theory or the modified couple stress theory, recently developed in the literature, are investigated and compared. The analysis is carried out in a variational setting, making use of Hamilton’s principle. It is shown that both the Timoshenko and the (possibly modified couple stress models are based on a microstructural kinematics which is governed by kinosthenic (ignorable terms in the Lagrangian. Despite their difference, all models bring in a beam-plane theory only one microstructural material parameter. Besides, the micropolar model formally reduces to the couple stress model upon introducing the proper constraint on the microstructure kinematics, although the material parameter is generally different. Line loading on the microstructure results in a nonconservative force potential. Finally, the Hamiltonian form of the micropolar beam model is derived and the canonical equations are presented along with their general solution. The latter exhibits a general oscillatory pattern for the microstructure rotation and stress, whose behavior matches the numerical findings.

  9. Assessing correlation of clustered mixed outcomes from a multivariate generalized linear mixed model.

    Science.gov (United States)

    Chen, Hsiang-Chun; Wehrly, Thomas E

    2015-02-20

    The classic concordance correlation coefficient measures the agreement between two variables. In recent studies, concordance correlation coefficients have been generalized to deal with responses from a distribution from the exponential family using the univariate generalized linear mixed model. Multivariate data arise when responses on the same unit are measured repeatedly by several methods. The relationship among these responses is often of interest. In clustered mixed data, the correlation could be present between repeated measurements either within the same observer or between different methods on the same subjects. Indices for measuring such association are needed. This study proposes a series of indices, namely, intra-correlation, inter-correlation, and total correlation coefficients to measure the correlation under various circumstances in a multivariate generalized linear model, especially for joint modeling of clustered count and continuous outcomes. The proposed indices are natural extensions of the concordance correlation coefficient. We demonstrate the methodology with simulation studies. A case example of osteoarthritis study is provided to illustrate the use of these proposed indices. Copyright © 2014 John Wiley & Sons, Ltd.

  10. Generalized linear mixed models for multi-reader multi-case studies of diagnostic tests.

    Science.gov (United States)

    Liu, Wei; Pantoja-Galicia, Norberto; Zhang, Bo; Kotz, Richard M; Pennello, Gene; Zhang, Hui; Jacob, Jessie; Zhang, Zhiwei

    2017-06-01

    Diagnostic tests are often compared in multi-reader multi-case (MRMC) studies in which a number of cases (subjects with or without the disease in question) are examined by several readers using all tests to be compared. One of the commonly used methods for analyzing MRMC data is the Obuchowski-Rockette (OR) method, which assumes that the true area under the receiver operating characteristic curve (AUC) for each combination of reader and test follows a linear mixed model with fixed effects for test and random effects for reader and the reader-test interaction. This article proposes generalized linear mixed models which generalize the OR model by incorporating a range-appropriate link function that constrains the true AUCs to the unit interval. The proposed models can be estimated by maximizing a pseudo-likelihood based on the approximate normality of AUC estimates. A Monte Carlo expectation-maximization algorithm can be used to maximize the pseudo-likelihood, and a non-parametric bootstrap procedure can be used for inference. The proposed method is evaluated in a simulation study and applied to an MRMC study of breast cancer detection.

  11. Efficient semiparametric estimation in generalized partially linear additive models for longitudinal/clustered data

    KAUST Repository

    Cheng, Guang

    2014-02-01

    We consider efficient estimation of the Euclidean parameters in a generalized partially linear additive models for longitudinal/clustered data when multiple covariates need to be modeled nonparametrically, and propose an estimation procedure based on a spline approximation of the nonparametric part of the model and the generalized estimating equations (GEE). Although the model in consideration is natural and useful in many practical applications, the literature on this model is very limited because of challenges in dealing with dependent data for nonparametric additive models. We show that the proposed estimators are consistent and asymptotically normal even if the covariance structure is misspecified. An explicit consistent estimate of the asymptotic variance is also provided. Moreover, we derive the semiparametric efficiency score and information bound under general moment conditions. By showing that our estimators achieve the semiparametric information bound, we effectively establish their efficiency in a stronger sense than what is typically considered for GEE. The derivation of our asymptotic results relies heavily on the empirical processes tools that we develop for the longitudinal/clustered data. Numerical results are used to illustrate the finite sample performance of the proposed estimators. © 2014 ISI/BS.

  12. A generalization of the MDS method by mixed integer linear and nonlinear mathematical models

    Directory of Open Access Journals (Sweden)

    Sadegh Niroomand

    2014-09-01

    Full Text Available The Multi-Dimensional Scaling (MDS method is used in statistics to detect hidden interrelations among multi-dimensional data and it has a wide range of applications. The method’s input is a matrix that describes the similarity/dissimilarity among objects of unknown dimension. The objects are generally reconstructed as points of a lower dimensional space to reveal the geometric configuration of the objects. The original MDS method uses Euclidean distance, for measuring both the distance of the reconstructed points and the bias of the reconstructed distances from the original similarity values. In this paper, these distances are distinguished, and distances other than Euclidean are also used, generalizing the MDS method. Two different distances may be used for the two different purposes. Therefore the instances of the generalized MDS model are denoted as  model, where the first distance is the type of distance of the reconstructed points and the second one measures the bias of the reconstructed distances and the similarity values. In the case of   and   distances mixed-integer programming models are provided. The computational experiences show that the generalized model can catch the key properties of the original configuration, if any exist. Keywords: Multivariate Analysis; Multi-Dimensional Scaling; Optimization; Mixed Integer Linear Programming; Statistics.

  13. Rate of strong consistency of quasi maximum likelihood estimate in generalized linear models

    Institute of Scientific and Technical Information of China (English)

    YUE Li; CHEN Xiru

    2004-01-01

    Under the assumption that in the generalized linear model (GLM) the expectation of the response variable has a correct specification and some other smooth conditions,it is shown that with probability one the quasi-likelihood equation for the GLM has a solution when the sample size n is sufficiently large. The rate of this solution tending to the true value is determined. In an important special case, this rate is the same as specified in the LIL for iid partial sums and thus cannot be improved anymore.

  14. ASYMPTOTIC NORMALITY OF MAXIMUM QUASI-LIKELIHOOD ESTIMATORS IN GENERALIZED LINEAR MODELS WITH FIXED DESIGN

    Institute of Scientific and Technical Information of China (English)

    Qibing GAO; Yaohua WU; Chunhua ZHU; Zhanfeng WANG

    2008-01-01

    In generalized linear models with fixed design, under the assumption ~ →∞ and otherregularity conditions, the asymptotic normality of maximum quasi-likelihood estimator (β)n, which is the root of the quasi-likelihood equation with natural link function ∑n/i=1Xi(yi-μ(X1/iβ))=0, is obtained,where λ/-n denotes the minimum eigenvalue of ∑n/i=1XiX/1/i, Xi are bounded p x q regressors, and yi are q × 1 responses.

  15. A New General Linear Convolution Model for fMRI Data Process

    Institute of Scientific and Technical Information of China (English)

    YUAN Hong; CHEN Hua-fu; YAO De-zhong

    2005-01-01

    General linear model (GLM) is the most popular method for functional magnetic resource imaging (fMRI) data analysis. However, its theory is imperfect. The key of this model is how to constitute the design-matrix to model the interesting effects better and separate noises better. For the purpose of detecting brain function activation, according to the principle of GLM, a new convolution model is presented by a new dynamic function convolving with design-matrix, which combining with t-test can be used to detect brain active signal. The fMRI imaging result of visual stimulus experiment indicates that brain activities mainly concentrate among vland v2 areas of visual cortex, and also verified the validity of this technique.

  16. Tuning, Diagnostics & Data Preparation for Generalized Linear Models Supervised Algorithm in Data Mining Technologies

    Directory of Open Access Journals (Sweden)

    Sachin Bhaskar

    2015-07-01

    Full Text Available Data mining techniques are the result of a long process of research and product development. Large amount of data are searched by the practice of Data Mining to find out the trends and patterns that go beyond simple analysis. For segmentation of data and also to evaluate the possibility of future events, complex mathematical algorithms are used here. Specific algorithm produces each Data Mining model. More than one algorithms are used to solve in best way by some Data Mining problems. Data Mining technologies can be used through Oracle. Generalized Linear Models (GLM Algorithm is used in Regression and Classification Oracle Data Mining functions. For linear modelling, GLM is one the popular statistical techniques. For regression and binary classification, GLM is implemented by Oracle Data Mining. Row diagnostics as well as model statistics and extensive co-efficient statistics are provided by GLM. It also supports confidence bounds.. This paper outlines and produces analysis of GLM algorithm, which will guide to understand the tuning, diagnostics & data preparation process and the importance of Regression & Classification supervised Oracle Data Mining functions and it is utilized in marketing, time series prediction, financial forecasting, overall business planning, trend analysis, environmental modelling, biomedical and drug response modelling, etc.

  17. Towards downscaling precipitation for Senegal - An approach based on generalized linear models and weather types

    Science.gov (United States)

    Rust, H. W.; Vrac, M.; Lengaigne, M.; Sultan, B.

    2012-04-01

    Changes in precipitation patterns with potentially less precipitation and an increasing risk for droughts pose a threat to water resources and agricultural yields in Senegal. Precipitation in this region is dominated by the West-African Monsoon being active from May to October, a seasonal pattern with inter-annual to decadal variability in the 20th century which is likely to be affected by climate change. We built a generalized linear model for a full spatial description of rainfall in Senegal. The model uses season, location, and a discrete set of weather types as predictors and yields a spatially continuous description of precipitation occurrences and intensities. Weather types have been defined on NCEP/NCAR reanalysis using zonal and meridional winds, as well as relative humidity. This model is suitable for downscaling precipitation, particularly precipitation occurrences relevant for drough risk mapping.

  18. Dimension Reduction and Alleviation of Confounding for Spatial Generalized Linear Mixed Models

    CERN Document Server

    Hughes, John

    2010-01-01

    Non-gaussian spatial data are very common in many disciplines. For instance, count data are common in disease mapping, and binary data are common in ecology. When fitting spatial regressions for such data, one needs to account for dependence to ensure reliable inference for the regression coefficients. The spatial generalized linear mixed model (SGLMM) offers a very popular and flexible approach to modeling such data, but the SGLMM suffers from three major shortcomings: (1) uninterpretability of parameters due to spatial confounding, (2) variance inflation due to spatial confounding, and (3) high-dimensional spatial random effects that make fully Bayesian inference for such models computationally challenging. We propose a new parameterization of the SGLMM that alleviates spatial confounding and speeds computation by greatly reducing the dimension of the spatial random effects. We illustrate the application of our approach to simulated binary, count, and Gaussian spatial datasets, and to a large infant mortali...

  19. Generalization of the ordinary state-based peridynamic model for isotropic linear viscoelasticity

    Science.gov (United States)

    Delorme, Rolland; Tabiai, Ilyass; Laberge Lebel, Louis; Lévesque, Martin

    2017-02-01

    This paper presents a generalization of the original ordinary state-based peridynamic model for isotropic linear viscoelasticity. The viscoelastic material response is represented using the thermodynamically acceptable Prony series approach. It can feature as many Prony terms as required and accounts for viscoelastic spherical and deviatoric components. The model was derived from an equivalence between peridynamic viscoelastic parameters and those appearing in classical continuum mechanics, by equating the free energy densities expressed in both frameworks. The model was simplified to a uni-dimensional expression and implemented to simulate a creep-recovery test. This implementation was finally validated by comparing peridynamic predictions to those predicted from classical continuum mechanics. An exact correspondence between peridynamics and the classical continuum approach was shown when the peridynamic horizon becomes small, meaning peridynamics tends toward classical continuum mechanics. This work provides a clear and direct means to researchers dealing with viscoelastic phenomena to tackle their problem within the peridynamic framework.

  20. Spatial variability in floodplain sedimentation: the use of generalized linear mixed-effects models

    Directory of Open Access Journals (Sweden)

    A. Cabezas

    2010-02-01

    Full Text Available Sediment, Total Organic Carbon (TOC and total nitrogen (TN accumulation during one overbank flood (1.15 y were examined at one reach of the Middle Ebro River (NE Spain for elucidating spatial patterns. To achieve this goal, four areas with different geomorphological features and located within the study reach were examined by using artificial grass mats. Within each area, 1 m2 study plots consisting on three pseudo-replicates were placed in a semi-regular grid oriented perpendicular to the main channel. TOC, TN and Particle-Size composition of deposited sediments were examined and accumulation rates estimated. Generalized linear mixed-effects models were used to analyze sedimentation patterns in order to handle clustered sampling units, specific-site effects and spatial self-correlation between observations. Our results confirm the importance of channel-floodplain morphology and site micro-topography in explaining sediment, TOC and TN deposition patterns, although the importance of another factors as vegetation morphology should be included in further studies to explain small scale variability. Generalized linear mixed-effect models provide a good framework to deal with the high spatial heterogeneity of this phenomenon at different spatial scales, and should be further investigated in order to explore its validity when examining the importance of factors such as flood magnitude or suspended sediment solid concentration.

  1. Spatial variability in floodplain sedimentation: the use of generalized linear mixed-effects models

    Science.gov (United States)

    Cabezas, A.; Angulo-Martínez, M.; Gonzalez-Sanchís, M.; Jimenez, J. J.; Comín, F. A.

    2010-08-01

    Sediment, Total Organic Carbon (TOC) and total nitrogen (TN) accumulation during one overbank flood (1.15 y return interval) were examined at one reach of the Middle Ebro River (NE Spain) for elucidating spatial patterns. To achieve this goal, four areas with different geomorphological features and located within the study reach were examined by using artificial grass mats. Within each area, 1 m2 study plots consisting of three pseudo-replicates were placed in a semi-regular grid oriented perpendicular to the main channel. TOC, TN and Particle-Size composition of deposited sediments were examined and accumulation rates estimated. Generalized linear mixed-effects models were used to analyze sedimentation patterns in order to handle clustered sampling units, specific-site effects and spatial self-correlation between observations. Our results confirm the importance of channel-floodplain morphology and site micro-topography in explaining sediment, TOC and TN deposition patterns, although the importance of other factors as vegetation pattern should be included in further studies to explain small-scale variability. Generalized linear mixed-effect models provide a good framework to deal with the high spatial heterogeneity of this phenomenon at different spatial scales, and should be further investigated in order to explore its validity when examining the importance of factors such as flood magnitude or suspended sediment concentration.

  2. Generalized linear model for mapping discrete trait loci implemented with LASSO algorithm.

    Directory of Open Access Journals (Sweden)

    Jun Xing

    Full Text Available Generalized estimating equation (GEE algorithm under a heterogeneous residual variance model is an extension of the iteratively reweighted least squares (IRLS method for continuous traits to discrete traits. In contrast to mixture model-based expectation-maximization (EM algorithm, the GEE algorithm can well detect quantitative trait locus (QTL, especially large effect QTLs located in large marker intervals in the manner of high computing speed. Based on a single QTL model, however, the GEE algorithm has very limited statistical power to detect multiple QTLs because of ignoring other linked QTLs. In this study, the fast least absolute shrinkage and selection operator (LASSO is derived for generalized linear model (GLM with all possible link functions. Under a heterogeneous residual variance model, the LASSO for GLM is used to iteratively estimate the non-zero genetic effects of those loci over entire genome. The iteratively reweighted LASSO is therefore extended to mapping QTL for discrete traits, such as ordinal, binary, and Poisson traits. The simulated and real data analyses are conducted to demonstrate the efficiency of the proposed method to simultaneously identify multiple QTLs for binary and Poisson traits as examples.

  3. c060: Extended Inference with Lasso and Elastic-Net Regularized Cox and Generalized Linear Models

    Directory of Open Access Journals (Sweden)

    Martin Sill

    2014-12-01

    Full Text Available We have developed the R package c060 with the aim of improving R software func- tionality for high-dimensional risk prediction modeling, e.g., for prognostic modeling of survival data using high-throughput genomic data. Penalized regression models provide a statistically appealing way of building risk prediction models from high-dimensional data. The popular CRAN package glmnet implements an efficient algorithm for fitting penalized Cox and generalized linear models. However, in practical applications the data analysis will typically not stop at the point where the model has been fitted. One is for example often interested in the stability of selected features and in assessing the prediction performance of a model and we provide functions to deal with both of these tasks. Our R functions are computationally efficient and offer the possibility of speeding up computing time through parallel computing. Another feature which can drastically reduce computing time is an efficient interval-search algorithm, which we have implemented for selecting the optimal parameter combination for elastic net penalties. These functions have been useful in our daily work at the Biostatistics department (C060 of the German Cancer Research Center where prognostic modeling of patient survival data is of particular interest. Although we focus on a survival data application of penalized Cox models in this article, the functions in our R package are in general applicable to all types of regression models implemented in the glmnet package, with the exception of prediction error curves, which are specific to time-to-event data.

  4. Developing a methodology to predict PM10 concentrations in urban areas using generalized linear models.

    Science.gov (United States)

    Garcia, J M; Teodoro, F; Cerdeira, R; Coelho, L M R; Kumar, Prashant; Carvalho, M G

    2016-09-01

    A methodology to predict PM10 concentrations in urban outdoor environments is developed based on the generalized linear models (GLMs). The methodology is based on the relationship developed between atmospheric concentrations of air pollutants (i.e. CO, NO2, NOx, VOCs, SO2) and meteorological variables (i.e. ambient temperature, relative humidity (RH) and wind speed) for a city (Barreiro) of Portugal. The model uses air pollution and meteorological data from the Portuguese monitoring air quality station networks. The developed GLM considers PM10 concentrations as a dependent variable, and both the gaseous pollutants and meteorological variables as explanatory independent variables. A logarithmic link function was considered with a Poisson probability distribution. Particular attention was given to cases with air temperatures both below and above 25°C. The best performance for modelled results against the measured data was achieved for the model with values of air temperature above 25°C compared with the model considering all ranges of air temperatures and with the model considering only temperature below 25°C. The model was also tested with similar data from another Portuguese city, Oporto, and results found to behave similarly. It is concluded that this model and the methodology could be adopted for other cities to predict PM10 concentrations when these data are not available by measurements from air quality monitoring stations or other acquisition means.

  5. MCMC Methods for Multi-Response Generalized Linear Mixed Models: The MCMCglmm R Package

    Directory of Open Access Journals (Sweden)

    Jarrod Had

    2010-02-01

    Full Text Available Generalized linear mixed models provide a flexible framework for modeling a range of data, although with non-Gaussian response variables the likelihood cannot be obtained in closed form. Markov chain Monte Carlo methods solve this problem by sampling from a series of simpler conditional distributions that can be evaluated. The R package MCMCglmm implements such an algorithm for a range of model fitting problems. More than one response variable can be analyzed simultaneously, and these variables are allowed to follow Gaussian, Poisson, multi(binominal, exponential, zero-inflated and censored distributions. A range of variance structures are permitted for the random effects, including interactions with categorical or continuous variables (i.e., random regression, and more complicated variance structures that arise through shared ancestry, either through a pedigree or through a phylogeny. Missing values are permitted in the response variable(s and data can be known up to some level of measurement error as in meta-analysis. All simu- lation is done in C/ C++ using the CSparse library for sparse linear systems.

  6. A generalized linear model for estimating spectrotemporal receptive fields from responses to natural sounds.

    Directory of Open Access Journals (Sweden)

    Ana Calabrese

    Full Text Available In the auditory system, the stimulus-response properties of single neurons are often described in terms of the spectrotemporal receptive field (STRF, a linear kernel relating the spectrogram of the sound stimulus to the instantaneous firing rate of the neuron. Several algorithms have been used to estimate STRFs from responses to natural stimuli; these algorithms differ in their functional models, cost functions, and regularization methods. Here, we characterize the stimulus-response function of auditory neurons using a generalized linear model (GLM. In this model, each cell's input is described by: 1 a stimulus filter (STRF; and 2 a post-spike filter, which captures dependencies on the neuron's spiking history. The output of the model is given by a series of spike trains rather than instantaneous firing rate, allowing the prediction of spike train responses to novel stimuli. We fit the model by maximum penalized likelihood to the spiking activity of zebra finch auditory midbrain neurons in response to conspecific vocalizations (songs and modulation limited (ml noise. We compare this model to normalized reverse correlation (NRC, the traditional method for STRF estimation, in terms of predictive power and the basic tuning properties of the estimated STRFs. We find that a GLM with a sparse prior predicts novel responses to both stimulus classes significantly better than NRC. Importantly, we find that STRFs from the two models derived from the same responses can differ substantially and that GLM STRFs are more consistent between stimulus classes than NRC STRFs. These results suggest that a GLM with a sparse prior provides a more accurate characterization of spectrotemporal tuning than does the NRC method when responses to complex sounds are studied in these neurons.

  7. On some problems of weak consistency of quasi-maximum likelihood estimates in generalized linear models

    Institute of Scientific and Technical Information of China (English)

    2008-01-01

    In this paper,we explore some weakly consistent properties of quasi-maximum likelihood estimates(QMLE) concerning the quasi-likelihood equation in=1 Xi(yi-μ(Xiβ)) = 0 for univariate generalized linear model E(y |X) = μ(X’β).Given uncorrelated residuals {ei = Yi-μ(Xiβ0),1 i n} and other conditions,we prove that βn-β0 = Op(λn-1/2) holds,where βn is a root of the above equation,β0 is the true value of parameter β and λn denotes the smallest eigenvalue of the matrix Sn = ni=1 XiXi.We also show that the convergence rate above is sharp,provided independent non-asymptotically degenerate residual sequence and other conditions.Moreover,paralleling to the elegant result of Drygas(1976) for classical linear regression models,we point out that the necessary condition guaranteeing the weak consistency of QMLE is Sn-1→ 0,as the sample size n →∞.

  8. On some problems of weak consistency of quasi-maximum likelihood estimates in generalized linear models

    Institute of Scientific and Technical Information of China (English)

    ZHANG SanGuo; LIAO Yuan

    2008-01-01

    In this paper, we explore some weakly consistent properties of quasi-maximum likelihood estimates(QMLE)concerning the quasi-likelihood equation ∑ni=1 Xi(yi-μ(X1iβ)) =0 for univariate generalized linear model E(y|X) =μ(X1β). Given uncorrelated residuals{ei=Yi-μ(X1iβ0), 1≤i≤n}and other conditions, we prove that (β)n-β0=Op(λ--1/2n)holds, where (β)n is a root of the above equation,β0 is the true value of parameter β and λ-n denotes the smallest eigenvalue of the matrix Sn=Σni=1 XiX1i. We also show that the convergence rate above is sharp, provided independent nonasymptotically degenerate residual sequence and other conditions. Moreover, paralleling to the elegant result of Drygas(1976)for classical linear regression models,we point out that the necessary condition guaranteeing the weak consistency of QMLE is S-1n→0, as the sample size n→∞.

  9. Quasi-Maximum Likelihood Estimators in Generalized Linear Models with Autoregressive Processes

    Institute of Scientific and Technical Information of China (English)

    Hong Chang HU; Lei SONG

    2014-01-01

    The paper studies a generalized linear model (GLM) yt=h(xTtβ)+εt, t=1, 2, . . . , n, whereε1=η1,εt=ρεt-1+ηt, t=2,3,...,n, h is a continuous diff erentiable function,ηt’s are independent and identically distributed random errors with zero mean and finite varianceσ 2. Firstly, the quasi-maximum likelihood (QML) estimators ofβ,ρandσ 2 are given. Secondly, under mild conditions, the asymptotic properties (including the existence, weak consistency and asymptotic distribution) of the QML estimators are investigated. Lastly, the validity of method is illuminated by a simulation example.

  10. Summary goodness-of-fit statistics for binary generalized linear models with noncanonical link functions.

    Science.gov (United States)

    Canary, Jana D; Blizzard, Leigh; Barry, Ronald P; Hosmer, David W; Quinn, Stephen J

    2016-05-01

    Generalized linear models (GLM) with a canonical logit link function are the primary modeling technique used to relate a binary outcome to predictor variables. However, noncanonical links can offer more flexibility, producing convenient analytical quantities (e.g., probit GLMs in toxicology) and desired measures of effect (e.g., relative risk from log GLMs). Many summary goodness-of-fit (GOF) statistics exist for logistic GLM. Their properties make the development of GOF statistics relatively straightforward, but it can be more difficult under noncanonical links. Although GOF tests for logistic GLM with continuous covariates (GLMCC) have been applied to GLMCCs with log links, we know of no GOF tests in the literature specifically developed for GLMCCs that can be applied regardless of link function chosen. We generalize the Tsiatis GOF statistic originally developed for logistic GLMCCs, (TG), so that it can be applied under any link function. Further, we show that the algebraically related Hosmer-Lemeshow (HL) and Pigeon-Heyse (J(2) ) statistics can be applied directly. In a simulation study, TG, HL, and J(2) were used to evaluate the fit of probit, log-log, complementary log-log, and log models, all calculated with a common grouping method. The TG statistic consistently maintained Type I error rates, while those of HL and J(2) were often lower than expected if terms with little influence were included. Generally, the statistics had similar power to detect an incorrect model. An exception occurred when a log GLMCC was incorrectly fit to data generated from a logistic GLMCC. In this case, TG had more power than HL or J(2) .

  11. Fast inference in generalized linear models via expected log-likelihoods.

    Science.gov (United States)

    Ramirez, Alexandro D; Paninski, Liam

    2014-04-01

    Generalized linear models play an essential role in a wide variety of statistical applications. This paper discusses an approximation of the likelihood in these models that can greatly facilitate computation. The basic idea is to replace a sum that appears in the exact log-likelihood by an expectation over the model covariates; the resulting "expected log-likelihood" can in many cases be computed significantly faster than the exact log-likelihood. In many neuroscience experiments the distribution over model covariates is controlled by the experimenter and the expected log-likelihood approximation becomes particularly useful; for example, estimators based on maximizing this expected log-likelihood (or a penalized version thereof) can often be obtained with orders of magnitude computational savings compared to the exact maximum likelihood estimators. A risk analysis establishes that these maximum EL estimators often come with little cost in accuracy (and in some cases even improved accuracy) compared to standard maximum likelihood estimates. Finally, we find that these methods can significantly decrease the computation time of marginal likelihood calculations for model selection and of Markov chain Monte Carlo methods for sampling from the posterior parameter distribution. We illustrate our results by applying these methods to a computationally-challenging dataset of neural spike trains obtained via large-scale multi-electrode recordings in the primate retina.

  12. A Hierarchical Generalized Linear Model in Combination with Dispersion Modeling to Improve Sib-Pair Linkage Analysis.

    Science.gov (United States)

    Lee, Woojoo; Kim, Jeonghwan; Lee, Youngjo; Park, Taesung; Suh, Young Ju

    2015-01-01

    We explored a hierarchical generalized linear model (HGLM) in combination with dispersion modeling to improve the sib-pair linkage analysis based on the revised Haseman-Elston regression model for a quantitative trait. A dispersion modeling technique was investigated for sib-pair linkage analysis using simulation studies and real data applications. We considered 4 heterogeneous dispersion settings according to a signal-to-noise ratio (SNR) in the various statistical models based on the Haseman-Elston regression model. Our numerical studies demonstrated that susceptibility loci could be detected well by modeling the dispersion parameter appropriately. In particular, the HGLM had better performance than the linear regression model and the ordinary linear mixed model when the SNR is low, i.e., when substantial noise was present in the data. The study shows that the HGLM in combination with dispersion modeling can be utilized to identify multiple markers showing linkage to familial complex traits accurately. Appropriate dispersion modeling might be more powerful to identify markers closest to the major genes which determine a quantitative trait. © 2015 S. Karger AG, Basel.

  13. Generalized functional linear models for gene-based case-control association studies.

    Science.gov (United States)

    Fan, Ruzong; Wang, Yifan; Mills, James L; Carter, Tonia C; Lobach, Iryna; Wilson, Alexander F; Bailey-Wilson, Joan E; Weeks, Daniel E; Xiong, Momiao

    2014-11-01

    By using functional data analysis techniques, we developed generalized functional linear models for testing association between a dichotomous trait and multiple genetic variants in a genetic region while adjusting for covariates. Both fixed and mixed effect models are developed and compared. Extensive simulations show that Rao's efficient score tests of the fixed effect models are very conservative since they generate lower type I errors than nominal levels, and global tests of the mixed effect models generate accurate type I errors. Furthermore, we found that the Rao's efficient score test statistics of the fixed effect models have higher power than the sequence kernel association test (SKAT) and its optimal unified version (SKAT-O) in most cases when the causal variants are both rare and common. When the causal variants are all rare (i.e., minor allele frequencies less than 0.03), the Rao's efficient score test statistics and the global tests have similar or slightly lower power than SKAT and SKAT-O. In practice, it is not known whether rare variants or common variants in a gene region are disease related. All we can assume is that a combination of rare and common variants influences disease susceptibility. Thus, the improved performance of our models when the causal variants are both rare and common shows that the proposed models can be very useful in dissecting complex traits. We compare the performance of our methods with SKAT and SKAT-O on real neural tube defects and Hirschsprung's disease datasets. The Rao's efficient score test statistics and the global tests are more sensitive than SKAT and SKAT-O in the real data analysis. Our methods can be used in either gene-disease genome-wide/exome-wide association studies or candidate gene analyses.

  14. Setting a generalized functional linear model (GFLM for the classification of different types of cancer

    Directory of Open Access Journals (Sweden)

    Miguel Flores

    2016-11-01

    Full Text Available This work aims to classify the DNA sequences of healthy and malignant cancer respectively. For this, supervised and unsupervised classification methods from a functional context are used; i.e. each strand of DNA is an observation. The observations are discretized, for that reason different ways to represent these observations with functions are evaluated. In addition, an exploratory study is done: estimating the mean and variance of each functional type of cancer. For the unsupervised classification method, hierarchical clustering with different measures of functional distance is used. On the other hand, for the supervised classification method, a functional generalized linear model is used. For this model the first and second derivatives are used which are included as discriminating variables. It has been verified that one of the advantages of working in the functional context is to obtain a model to correctly classify cancers by 100%. For the implementation of the methods it has been used the fda.usc R package that includes all the techniques of functional data analysis used in this work. In addition, some that have been developed in recent decades. For more details of these techniques can be consulted Ramsay, J. O. and Silverman (2005 and Ferraty et al. (2006.

  15. Statistical Methods for Quality Control of Steel Coils Manufacturing Process using Generalized Linear Models

    Science.gov (United States)

    García-Díaz, J. Carlos

    2009-11-01

    Fault detection and diagnosis is an important problem in process engineering. Process equipments are subject to malfunctions during operation. Galvanized steel is a value added product, furnishing effective performance by combining the corrosion resistance of zinc with the strength and formability of steel. Fault detection and diagnosis is an important problem in continuous hot dip galvanizing and the increasingly stringent quality requirements in automotive industry has also demanded ongoing efforts in process control to make the process more robust. When faults occur, they change the relationship among these observed variables. This work compares different statistical regression models proposed in the literature for estimating the quality of galvanized steel coils on the basis of short time histories. Data for 26 batches were available. Five variables were selected for monitoring the process: the steel strip velocity, four bath temperatures and bath level. The entire data consisting of 48 galvanized steel coils was divided into sets. The first training data set was 25 conforming coils and the second data set was 23 nonconforming coils. Logistic regression is a modeling tool in which the dependent variable is categorical. In most applications, the dependent variable is binary. The results show that the logistic generalized linear models do provide good estimates of quality coils and can be useful for quality control in manufacturing process.

  16. The Overlooked Potential of Generalized Linear Models in Astronomy-II: Gamma regression and photometric redshifts

    CERN Document Server

    Elliott, J; Krone-Martins, A; Cameron, E; Ishida, E E O; Hilbe, J

    2014-01-01

    Machine learning techniques offer a precious tool box for use within astronomy to solve problems involving so-called big data. They provide a means to make accurate predictions about a particular system without prior knowledge of the underlying physical processes of the data. In this article, and the companion papers of this series, we present the set of Generalized Linear Models (GLMs) as a fast alternative method for tackling general astronomical problems, including the ones related to the machine learning paradigm. To demonstrate the applicability of GLMs to inherently positive and continuous physical observables, we explore their use in estimating the photometric redshifts of galaxies from their multi-wavelength photometry. Using the gamma family with a log link function we predict redshifts from the photo-z Accuracy Testing simulated catalogue and a subset of the Sloan Digital Sky Survey from Data Release 10. We obtain fits that result in catastrophic outlier rates as low as ~1% for simulated and ~2% for...

  17. Predicting stem borer density in maize using RapidEye data and generalized linear models

    Science.gov (United States)

    Abdel-Rahman, Elfatih M.; Landmann, Tobias; Kyalo, Richard; Ong'amo, George; Mwalusepo, Sizah; Sulieman, Saad; Ru, Bruno Le

    2017-05-01

    Average maize yield in eastern Africa is 2.03 t ha-1 as compared to global average of 6.06 t ha-1 due to biotic and abiotic constraints. Amongst the biotic production constraints in Africa, stem borers are the most injurious. In eastern Africa, maize yield losses due to stem borers are currently estimated between 12% and 21% of the total production. The objective of the present study was to explore the possibility of RapidEye spectral data to assess stem borer larva densities in maize fields in two study sites in Kenya. RapidEye images were acquired for the Bomet (western Kenya) test site on the 9th of December 2014 and on 27th of January 2015, and for Machakos (eastern Kenya) a RapidEye image was acquired on the 3rd of January 2015. Five RapidEye spectral bands as well as 30 spectral vegetation indices (SVIs) were utilized to predict per field maize stem borer larva densities using generalized linear models (GLMs), assuming Poisson ('Po') and negative binomial ('NB') distributions. Root mean square error (RMSE) and ratio prediction to deviation (RPD) statistics were used to assess the models performance using a leave-one-out cross-validation approach. The Zero-inflated NB ('ZINB') models outperformed the 'NB' models and stem borer larva densities could only be predicted during the mid growing season in December and early January in both study sites, respectively (RMSE = 0.69-1.06 and RPD = 8.25-19.57). Overall, all models performed similar when all the 30 SVIs (non-nested) and only the significant (nested) SVIs were used. The models developed could improve decision making regarding controlling maize stem borers within integrated pest management (IPM) interventions.

  18. Meta-analysis of Complex Diseases at Gene Level with Generalized Functional Linear Models.

    Science.gov (United States)

    Fan, Ruzong; Wang, Yifan; Chiu, Chi-Yang; Chen, Wei; Ren, Haobo; Li, Yun; Boehnke, Michael; Amos, Christopher I; Moore, Jason H; Xiong, Momiao

    2016-02-01

    We developed generalized functional linear models (GFLMs) to perform a meta-analysis of multiple case-control studies to evaluate the relationship of genetic data to dichotomous traits adjusting for covariates. Unlike the previously developed meta-analysis for sequence kernel association tests (MetaSKATs), which are based on mixed-effect models to make the contributions of major gene loci random, GFLMs are fixed models; i.e., genetic effects of multiple genetic variants are fixed. Based on GFLMs, we developed chi-squared-distributed Rao's efficient score test and likelihood-ratio test (LRT) statistics to test for an association between a complex dichotomous trait and multiple genetic variants. We then performed extensive simulations to evaluate the empirical type I error rates and power performance of the proposed tests. The Rao's efficient score test statistics of GFLMs are very conservative and have higher power than MetaSKATs when some causal variants are rare and some are common. When the causal variants are all rare [i.e., minor allele frequencies (MAF) analysis of eight European studies and detected significant association for 18 genes (P < 3.10 × 10(-6)), tentative association for 2 genes (HHEX and HMGA2; P ≈ 10(-5)), and no association for 2 genes, while MetaSKATs detected none. In addition, the traditional additive-effect model detects association at gene HHEX. GFLMs and related tests can analyze rare or common variants or a combination of the two and can be useful in whole-genome and whole-exome association studies.

  19. Determination of a Differential Item Functioning Procedure Using the Hierarchical Generalized Linear Model

    Directory of Open Access Journals (Sweden)

    Tülin Acar

    2012-01-01

    Full Text Available The aim of this research is to compare the result of the differential item functioning (DIF determining with hierarchical generalized linear model (HGLM technique and the results of the DIF determining with logistic regression (LR and item response theory–likelihood ratio (IRT-LR techniques on the test items. For this reason, first in this research, it is determined whether the students encounter DIF with HGLM, LR, and IRT-LR techniques according to socioeconomic status (SES, in the Turkish, Social Sciences, and Science subtest items of the Secondary School Institutions Examination. When inspecting the correlations among the techniques in terms of determining the items having DIF, it was discovered that there was significant correlation between the results of IRT-LR and LR techniques in all subtests; merely in Science subtest, the results of the correlation between HGLM and IRT-LR techniques were found significant. DIF applications can be made on test items with other DIF analysis techniques that were not taken to the scope of this research. The analysis results, which were determined by using the DIF techniques in different sample sizes, can be compared.

  20. The overlooked potential of Generalized Linear Models in astronomy-II: Gamma regression and photometric redshifts

    Science.gov (United States)

    Elliott, J.; de Souza, R. S.; Krone-Martins, A.; Cameron, E.; Ishida, E. E. O.; Hilbe, J.

    2015-04-01

    Machine learning techniques offer a precious tool box for use within astronomy to solve problems involving so-called big data. They provide a means to make accurate predictions about a particular system without prior knowledge of the underlying physical processes of the data. In this article, and the companion papers of this series, we present the set of Generalized Linear Models (GLMs) as a fast alternative method for tackling general astronomical problems, including the ones related to the machine learning paradigm. To demonstrate the applicability of GLMs to inherently positive and continuous physical observables, we explore their use in estimating the photometric redshifts of galaxies from their multi-wavelength photometry. Using the gamma family with a log link function we predict redshifts from the PHoto-z Accuracy Testing simulated catalogue and a subset of the Sloan Digital Sky Survey from Data Release 10. We obtain fits that result in catastrophic outlier rates as low as ∼1% for simulated and ∼2% for real data. Moreover, we can easily obtain such levels of precision within a matter of seconds on a normal desktop computer and with training sets that contain merely thousands of galaxies. Our software is made publicly available as a user-friendly package developed in Python, R and via an interactive web application. This software allows users to apply a set of GLMs to their own photometric catalogues and generates publication quality plots with minimum effort. By facilitating their ease of use to the astronomical community, this paper series aims to make GLMs widely known and to encourage their implementation in future large-scale projects, such as the Large Synoptic Survey Telescope.

  1. Assessing the tangent linear behaviour of common tracer transport schemes and their use in a linearised atmospheric general circulation model

    Directory of Open Access Journals (Sweden)

    Daniel Holdaway

    2015-09-01

    Full Text Available The linearity of a selection of common advection schemes is tested and examined with a view to their use in the tangent linear and adjoint versions of an atmospheric general circulation model. The schemes are tested within a simple offline one-dimensional periodic domain as well as using a simplified and complete configuration of the linearised version of NASA's Goddard Earth Observing System version 5 (GEOS-5. All schemes which prevent the development of negative values and preserve the shape of the solution are confirmed to have non-linear behaviour. The piecewise parabolic method (PPM with certain flux limiters, including that used by default in GEOS-5, is found to support linear growth near the shocks. This property can cause the rapid development of unrealistically large perturbations within the tangent linear and adjoint models. It is shown that these schemes with flux limiters should not be used within the linearised version of a transport scheme. The results from tests using GEOS-5 show that the current default scheme (a version of PPM is not suitable for the tangent linear and adjoint model, and that using a linear third-order scheme for the linearised model produces better behaviour. Using the third-order scheme for the linearised model improves the correlations between the linear and non-linear perturbation trajectories for cloud liquid water and cloud liquid ice in GEOS-5.

  2. glmulti: An R Package for Easy Automated Model Selection with (Generalized Linear Models

    Directory of Open Access Journals (Sweden)

    Vincent Calcagno

    2010-10-01

    Full Text Available We introduce glmulti, an R package for automated model selection and multi-model inference with glm and related functions. From a list of explanatory variables, the provided function glmulti builds all possible unique models involving these variables and, optionally, their pairwise interactions. Restrictions can be specified for candidate models, by excluding specific terms, enforcing marginality, or controlling model complexity. Models are fitted with standard R functions like glm. The n best models and their support (e.g., (QAIC, (QAICc, or BIC are returned, allowing model selection and multi-model inference through standard R functions. The package is optimized for large candidate sets by avoiding memory limitation, facilitating parallelization and providing, in addition to exhaustive screening, a compiled genetic algorithm method. This article briefly presents the statistical framework and introduces the package, with applications to simulated and real data.

  3. Comparing Multiple-Group Multinomial Log-Linear Models for Multidimensional Skill Distributions in the General Diagnostic Model. Research Report. ETS RR-08-35

    Science.gov (United States)

    Xu, Xueli; von Davier, Matthias

    2008-01-01

    The general diagnostic model (GDM) utilizes located latent classes for modeling a multidimensional proficiency variable. In this paper, the GDM is extended by employing a log-linear model for multiple populations that assumes constraints on parameters across multiple groups. This constrained model is compared to log-linear models that assume…

  4. A simulation-based goodness-of-fit test for random effects in generalized linear mixed models

    DEFF Research Database (Denmark)

    Waagepetersen, Rasmus

    2006-01-01

    The goodness-of-fit of the distribution of random effects in a generalized linear mixed model is assessed using a conditional simulation of the random effects conditional on the observations. Provided that the specified joint model for random effects and observations is correct, the marginal...

  5. A simulation-based goodness-of-fit test for random effects in generalized linear mixed models

    DEFF Research Database (Denmark)

    Waagepetersen, Rasmus Plenge

    The goodness-of-fit of the distribution of random effects in a generalized linear mixed model is assessed using a conditional simulation of the random effects conditional on the observations. Provided that the specified joint model for random effects and observations is correct, the marginal...

  6. Assessing the Tangent Linear Behaviour of Common Tracer Transport Schemes and Their Use in a Linearised Atmospheric General Circulation Model

    Science.gov (United States)

    Holdaway, Daniel; Kent, James

    2015-01-01

    The linearity of a selection of common advection schemes is tested and examined with a view to their use in the tangent linear and adjoint versions of an atmospheric general circulation model. The schemes are tested within a simple offline one-dimensional periodic domain as well as using a simplified and complete configuration of the linearised version of NASA's Goddard Earth Observing System version 5 (GEOS-5). All schemes which prevent the development of negative values and preserve the shape of the solution are confirmed to have nonlinear behaviour. The piecewise parabolic method (PPM) with certain flux limiters, including that used by default in GEOS-5, is found to support linear growth near the shocks. This property can cause the rapid development of unrealistically large perturbations within the tangent linear and adjoint models. It is shown that these schemes with flux limiters should not be used within the linearised version of a transport scheme. The results from tests using GEOS-5 show that the current default scheme (a version of PPM) is not suitable for the tangent linear and adjoint model, and that using a linear third-order scheme for the linearised model produces better behaviour. Using the third-order scheme for the linearised model improves the correlations between the linear and non-linear perturbation trajectories for cloud liquid water and cloud liquid ice in GEOS-5.

  7. Assessing the Tangent Linear Behaviour of Common Tracer Transport Schemes and Their Use in a Linearised Atmospheric General Circulation Model

    Science.gov (United States)

    Holdaway, Daniel; Kent, James

    2015-01-01

    The linearity of a selection of common advection schemes is tested and examined with a view to their use in the tangent linear and adjoint versions of an atmospheric general circulation model. The schemes are tested within a simple offline one-dimensional periodic domain as well as using a simplified and complete configuration of the linearised version of NASA's Goddard Earth Observing System version 5 (GEOS-5). All schemes which prevent the development of negative values and preserve the shape of the solution are confirmed to have nonlinear behaviour. The piecewise parabolic method (PPM) with certain flux limiters, including that used by default in GEOS-5, is found to support linear growth near the shocks. This property can cause the rapid development of unrealistically large perturbations within the tangent linear and adjoint models. It is shown that these schemes with flux limiters should not be used within the linearised version of a transport scheme. The results from tests using GEOS-5 show that the current default scheme (a version of PPM) is not suitable for the tangent linear and adjoint model, and that using a linear third-order scheme for the linearised model produces better behaviour. Using the third-order scheme for the linearised model improves the correlations between the linear and non-linear perturbation trajectories for cloud liquid water and cloud liquid ice in GEOS-5.

  8. Examining secular trend  and seasonality in count data using dynamic generalized linear modelling

    DEFF Research Database (Denmark)

    Lundbye-Christensen, Søren; Dethlefsen, Claus; Gorst-Rasmussen, Anders;

    series regression model for Poisson counts. It differs in allowing the regression coefficients to vary gradually over time in a random fashion. Data  In the period January 1980 to 1999, 17,989 incidents of acute myocardial infarction were recorded in the county of Northern Jutland, Denmark. Records were...... updated daily. Results  The model with a seasonal pattern and an approximately linear trend was fitted to the data, and diagnostic plots indicate a good model fit. The analysis with the dynamic model revealed peaks coinciding with influenza epidemics. On average the peak-to-trough ratio is estimated...

  9. Taylor series approximation of semi-blind best linear unbiased channel estimates for the general linear model

    OpenAIRE

    Pladdy, Christopher; Nerayanuru, Sreenivasa M.; Fimoff, Mark; Özen, Serdar; Zoltowski, Michael

    2004-01-01

    We present a low complexity approximate method for semi-blind best linear unbiased estimation (BLUE) of a channel impulse response vector (CIR) for a communication system, which utilizes a periodically transmitted training sequence, within a continuous stream of information symbols. The algorithm achieves slightly degraded results at a much lower complexity than directly computing the BLUE CIR estimate. In addition, the inverse matrix required to invert the weighted normal equations to solve ...

  10. Extending generalized linear models with random effects and components of dispersion.

    NARCIS (Netherlands)

    Engel, B.

    1997-01-01

    This dissertation was born out of a need for general and numerically feasible procedures for inference in variance components models for non-normal data. The methodology should be widely applicable within the institutes of the Agricultural Research Department (DLO) of the Dutch Ministry of Agricultu

  11. Hierarchical generalized linear models for multiple groups of rare and common variants: jointly estimating group and individual-variant effects.

    Directory of Open Access Journals (Sweden)

    Nengjun Yi

    2011-12-01

    Full Text Available Complex diseases and traits are likely influenced by many common and rare genetic variants and environmental factors. Detecting disease susceptibility variants is a challenging task, especially when their frequencies are low and/or their effects are small or moderate. We propose here a comprehensive hierarchical generalized linear model framework for simultaneously analyzing multiple groups of rare and common variants and relevant covariates. The proposed hierarchical generalized linear models introduce a group effect and a genetic score (i.e., a linear combination of main-effect predictors for genetic variants for each group of variants, and jointly they estimate the group effects and the weights of the genetic scores. This framework includes various previous methods as special cases, and it can effectively deal with both risk and protective variants in a group and can simultaneously estimate the cumulative contribution of multiple variants and their relative importance. Our computational strategy is based on extending the standard procedure for fitting generalized linear models in the statistical software R to the proposed hierarchical models, leading to the development of stable and flexible tools. The methods are illustrated with sequence data in gene ANGPTL4 from the Dallas Heart Study. The performance of the proposed procedures is further assessed via simulation studies. The methods are implemented in a freely available R package BhGLM (http://www.ssg.uab.edu/bhglm/.

  12. Hierarchical Generalized Linear Models for Multiple Groups of Rare and Common Variants: Jointly Estimating Group and Individual-Variant Effects

    Science.gov (United States)

    Yi, Nengjun; Liu, Nianjun; Zhi, Degui; Li, Jun

    2011-01-01

    Complex diseases and traits are likely influenced by many common and rare genetic variants and environmental factors. Detecting disease susceptibility variants is a challenging task, especially when their frequencies are low and/or their effects are small or moderate. We propose here a comprehensive hierarchical generalized linear model framework for simultaneously analyzing multiple groups of rare and common variants and relevant covariates. The proposed hierarchical generalized linear models introduce a group effect and a genetic score (i.e., a linear combination of main-effect predictors for genetic variants) for each group of variants, and jointly they estimate the group effects and the weights of the genetic scores. This framework includes various previous methods as special cases, and it can effectively deal with both risk and protective variants in a group and can simultaneously estimate the cumulative contribution of multiple variants and their relative importance. Our computational strategy is based on extending the standard procedure for fitting generalized linear models in the statistical software R to the proposed hierarchical models, leading to the development of stable and flexible tools. The methods are illustrated with sequence data in gene ANGPTL4 from the Dallas Heart Study. The performance of the proposed procedures is further assessed via simulation studies. The methods are implemented in a freely available R package BhGLM (http://www.ssg.uab.edu/bhglm/). PMID:22144906

  13. A Generalized Linear Transport Model for Spatially-Correlated Stochastic Media

    CERN Document Server

    Davis, Anthony B

    2014-01-01

    We formulate a new model for transport in stochastic media with long-range spatial correlations where exponential attenuation (controlling the propagation part of the transport) becomes power law. Direct transmission over optical distance $\\tau(s)$, for fixed physical distance $s$, thus becomes $(1+\\tau(s)/a)^{-a}$, with standard exponential decay recovered when $a\\to\\infty$. Atmospheric turbulence phenomenology for fluctuating optical properties rationalizes this switch. Foundational equations for this generalized transport model are stated in integral form for $d=1,2,3$ spatial dimensions. A deterministic numerical solution is developed in $d=1$ using Markov Chain formalism, verified with Monte Carlo, and used to investigate internal radiation fields. Standard two-stream theory, where diffusion is exact, is recovered when $a=\\infty$. Differential diffusion equations are not presently known when $a<\\infty$, nor is the integro-differential form of the generalized transport equation. Monte Carlo simulations...

  14. Comparing artificial neural networks, general linear models and support vector machines in building predictive models for small interfering RNAs.

    Directory of Open Access Journals (Sweden)

    Kyle A McQuisten

    Full Text Available BACKGROUND: Exogenous short interfering RNAs (siRNAs induce a gene knockdown effect in cells by interacting with naturally occurring RNA processing machinery. However not all siRNAs induce this effect equally. Several heterogeneous kinds of machine learning techniques and feature sets have been applied to modeling siRNAs and their abilities to induce knockdown. There is some growing agreement to which techniques produce maximally predictive models and yet there is little consensus for methods to compare among predictive models. Also, there are few comparative studies that address what the effect of choosing learning technique, feature set or cross validation approach has on finding and discriminating among predictive models. PRINCIPAL FINDINGS: Three learning techniques were used to develop predictive models for effective siRNA sequences including Artificial Neural Networks (ANNs, General Linear Models (GLMs and Support Vector Machines (SVMs. Five feature mapping methods were also used to generate models of siRNA activities. The 2 factors of learning technique and feature mapping were evaluated by complete 3x5 factorial ANOVA. Overall, both learning techniques and feature mapping contributed significantly to the observed variance in predictive models, but to differing degrees for precision and accuracy as well as across different kinds and levels of model cross-validation. CONCLUSIONS: The methods presented here provide a robust statistical framework to compare among models developed under distinct learning techniques and feature sets for siRNAs. Further comparisons among current or future modeling approaches should apply these or other suitable statistically equivalent methods to critically evaluate the performance of proposed models. ANN and GLM techniques tend to be more sensitive to the inclusion of noisy features, but the SVM technique is more robust under large numbers of features for measures of model precision and accuracy. Features

  15. LINEAR GENERAL EQUILIBRIUM MODEL OF ENERGY DEMAND AND CO2 EMISSIONS GENERATED BY THE ANDALUSIAN PRODUCTIVE SYSTEM

    Directory of Open Access Journals (Sweden)

    Manuel Alejandro Cardenete

    2012-01-01

    Full Text Available In this study we apply a multiplier decomposition methodology of a linear general equilibrium model based on the regional social accounting matrix to the Andalusian economy. The aim of this methodology is to separate the size of the different effects in terms of energy expenditure and total emissions generated by the whole productive system to satisfy the final demand of each branch of the Andalusian economy and the direct emissions generated to produce energy for each subsystem.

  16. A primer on linear models

    CERN Document Server

    Monahan, John F

    2008-01-01

    Preface Examples of the General Linear Model Introduction One-Sample Problem Simple Linear Regression Multiple Regression One-Way ANOVA First Discussion The Two-Way Nested Model Two-Way Crossed Model Analysis of Covariance Autoregression Discussion The Linear Least Squares Problem The Normal Equations The Geometry of Least Squares Reparameterization Gram-Schmidt Orthonormalization Estimability and Least Squares Estimators Assumptions for the Linear Mean Model Confounding, Identifiability, and Estimability Estimability and Least Squares Estimators F

  17. Biohybrid Control of General Linear Systems Using the Adaptive Filter Model of Cerebellum.

    Science.gov (United States)

    Wilson, Emma D; Assaf, Tareq; Pearson, Martin J; Rossiter, Jonathan M; Dean, Paul; Anderson, Sean R; Porrill, John

    2015-01-01

    The adaptive filter model of the cerebellar microcircuit has been successfully applied to biological motor control problems, such as the vestibulo-ocular reflex (VOR), and to sensory processing problems, such as the adaptive cancelation of reafferent noise. It has also been successfully applied to problems in robotics, such as adaptive camera stabilization and sensor noise cancelation. In previous applications to inverse control problems, the algorithm was applied to the velocity control of a plant dominated by viscous and elastic elements. Naive application of the adaptive filter model to the displacement (as opposed to velocity) control of this plant results in unstable learning and control. To be more generally useful in engineering problems, it is essential to remove this restriction to enable the stable control of plants of any order. We address this problem here by developing a biohybrid model reference adaptive control (MRAC) scheme, which stabilizes the control algorithm for strictly proper plants. We evaluate the performance of this novel cerebellar-inspired algorithm with MRAC scheme in the experimental control of a dielectric electroactive polymer, a class of artificial muscle. The results show that the augmented cerebellar algorithm is able to accurately control the displacement response of the artificial muscle. The proposed solution not only greatly extends the practical applicability of the cerebellar-inspired algorithm, but may also shed light on cerebellar involvement in a wider range of biological control tasks.

  18. Biohybrid control of general linear systems using the adaptive filter model of cerebellum

    Directory of Open Access Journals (Sweden)

    Emma D. Wilson

    2015-07-01

    Full Text Available The adaptive filter model of the cerebellar microcircuit has been successfully applied to biological motor control problems such as the vestibulo-ocular reflex (VOR and to sensory processing problems such as the adaptive cancellation of reafferent noise. It has also been successfully applied to problems in robotics such as adaptive camera stabilisation and sensor noise cancellation. In previous applications to inverse control problems the algorithm was applied to the velocity control of a plant dominated by viscous and elastic elements. Naive application of the adaptive filter model to the displacement (as opposed to velocity control of this plant results in unstable learning and control. To be more generally useful in engineering problems it is essential to remove this restriction to enable the stable control of plants of any order. We address this problem here by developing a biohybrid model reference adaptive control (MRAC scheme, which stabilises the control algorithm for strictly proper plants. We evaluate the performance of this novel cerebellar inspired algorithm with MRAC scheme in the experimental control of a dielectric electroactive polymer, a class of artificial muscle. The results show that the augmented cerebellar algorithm is able to accurately control the displacement response of the artificial muscle. The proposed solution not only greatly extends the practical applicability of the cerebellar-inspired algorithm, but may also shed light on cerebellar involvement in a wider range of biological control tasks.

  19. Methodological quality and reporting of generalized linear mixed models in clinical medicine (2000-2012: a systematic review.

    Directory of Open Access Journals (Sweden)

    Martí Casals

    Full Text Available BACKGROUND: Modeling count and binary data collected in hierarchical designs have increased the use of Generalized Linear Mixed Models (GLMMs in medicine. This article presents a systematic review of the application and quality of results and information reported from GLMMs in the field of clinical medicine. METHODS: A search using the Web of Science database was performed for published original articles in medical journals from 2000 to 2012. The search strategy included the topic "generalized linear mixed models","hierarchical generalized linear models", "multilevel generalized linear model" and as a research domain we refined by science technology. Papers reporting methodological considerations without application, and those that were not involved in clinical medicine or written in English were excluded. RESULTS: A total of 443 articles were detected, with an increase over time in the number of articles. In total, 108 articles fit the inclusion criteria. Of these, 54.6% were declared to be longitudinal studies, whereas 58.3% and 26.9% were defined as repeated measurements and multilevel design, respectively. Twenty-two articles belonged to environmental and occupational public health, 10 articles to clinical neurology, 8 to oncology, and 7 to infectious diseases and pediatrics. The distribution of the response variable was reported in 88% of the articles, predominantly Binomial (n = 64 or Poisson (n = 22. Most of the useful information about GLMMs was not reported in most cases. Variance estimates of random effects were described in only 8 articles (9.2%. The model validation, the method of covariate selection and the method of goodness of fit were only reported in 8.0%, 36.8% and 14.9% of the articles, respectively. CONCLUSIONS: During recent years, the use of GLMMs in medical literature has increased to take into account the correlation of data when modeling qualitative data or counts. According to the current recommendations, the

  20. A generalized electrostatic micro-mirror (GEM) model for a two-axis convex piecewise linear shaped MEMS mirror

    Science.gov (United States)

    Edwards, C. L.; Edwards, M. L.

    2009-05-01

    MEMS micro-mirror technology offers the opportunity to replace larger optical actuators with smaller, faster ones for lidar, network switching, and other beam steering applications. Recent developments in modeling and simulation of MEMS two-axis (tip-tilt) mirrors have resulted in closed-form solutions that are expressed in terms of physical, electrical and environmental parameters related to the MEMS device. The closed-form analytical expressions enable dynamic time-domain simulations without excessive computational overhead and are referred to as the Micro-mirror Pointing Model (MPM). Additionally, these first-principle models have been experimentally validated with in-situ static, dynamic, and stochastic measurements illustrating their reliability. These models have assumed that the mirror has a rectangular shape. Because the corners can limit the dynamic operation of a rectangular mirror, it is desirable to shape the mirror, e.g., mitering the corners. Presented in this paper is the formulation of a generalized electrostatic micromirror (GEM) model with an arbitrary convex piecewise linear shape that is readily implemented in MATLAB and SIMULINK for steady-state and dynamic simulations. Additionally, such a model permits an arbitrary shaped mirror to be approximated as a series of linearly tapered segments. Previously, "effective area" arguments were used to model a non-rectangular shaped mirror with an equivalent rectangular one. The GEM model shows the limitations of this approach and provides a pre-fabrication tool for designing mirror shapes.

  1. Dynamic Linear Models with R

    CERN Document Server

    Campagnoli, Patrizia; Petris, Giovanni

    2009-01-01

    State space models have gained tremendous popularity in as disparate fields as engineering, economics, genetics and ecology. Introducing general state space models, this book focuses on dynamic linear models, emphasizing their Bayesian analysis. It illustrates the fundamental steps needed to use dynamic linear models in practice, using R package.

  2. Generalized Forecast Error Variance Decomposition for Linear and Nonlinear Multivariate Models

    DEFF Research Database (Denmark)

    Lanne, Markku; Nyberg, Henri

    We propose a new generalized forecast error variance decomposition with the property that the proportions of the impact accounted for by innovations in each variable sum to unity. Our decomposition is based on the well-established concept of the generalized impulse response function. The use...

  3. Generalized Cross-Gramian for Linear Systems

    DEFF Research Database (Denmark)

    Shaker, Hamid Reza

    2012-01-01

    The cross-gramian is a well-known matrix with embedded controllability and observability information. The cross-gramian is related to the Hankel operator and the Hankel singular values of a linear square system and it has several interesting properties. These properties make the cross-gramian...... popular in several applications including model reduction, control configuration selection and sensitivity analysis. The ordinary cross-gramian which has been defined in the literature is the solution of a Sylvester equation. This Sylvester equation is not always solvable and therefore for some linear...... square symmetric systems, the ordinary cross-gramian does not exist. To cope with this problem, a new generalized cross-gramian is introduced in this paper. In contrast to the ordinary cross-gramian, the generalized cross-gramian can be easily obtained for general linear systems and therefore can be used...

  4. Bayesian inference for generalized linear mixed model based on the multivariate t distribution in population pharmacokinetic study.

    Directory of Open Access Journals (Sweden)

    Fang-Rong Yan

    Full Text Available This article provides a fully bayesian approach for modeling of single-dose and complete pharmacokinetic data in a population pharmacokinetic (PK model. To overcome the impact of outliers and the difficulty of computation, a generalized linear model is chosen with the hypothesis that the errors follow a multivariate Student t distribution which is a heavy-tailed distribution. The aim of this study is to investigate and implement the performance of the multivariate t distribution to analyze population pharmacokinetic data. Bayesian predictive inferences and the Metropolis-Hastings algorithm schemes are used to process the intractable posterior integration. The precision and accuracy of the proposed model are illustrated by the simulating data and a real example of theophylline data.

  5. An efficient hierarchical generalized linear mixed model for pathway analysis of genome-wide association studies.

    Science.gov (United States)

    Wang, Lily; Jia, Peilin; Wolfinger, Russell D; Chen, Xi; Grayson, Britney L; Aune, Thomas M; Zhao, Zhongming

    2011-03-01

    In genome-wide association studies (GWAS) of complex diseases, genetic variants having real but weak associations often fail to be detected at the stringent genome-wide significance level. Pathway analysis, which tests disease association with combined association signals from a group of variants in the same pathway, has become increasingly popular. However, because of the complexities in genetic data and the large sample sizes in typical GWAS, pathway analysis remains to be challenging. We propose a new statistical model for pathway analysis of GWAS. This model includes a fixed effects component that models mean disease association for a group of genes, and a random effects component that models how each gene's association with disease varies about the gene group mean, thus belongs to the class of mixed effects models. The proposed model is computationally efficient and uses only summary statistics. In addition, it corrects for the presence of overlapping genes and linkage disequilibrium (LD). Via simulated and real GWAS data, we showed our model improved power over currently available pathway analysis methods while preserving type I error rate. Furthermore, using the WTCCC Type 1 Diabetes (T1D) dataset, we demonstrated mixed model analysis identified meaningful biological processes that agreed well with previous reports on T1D. Therefore, the proposed methodology provides an efficient statistical modeling framework for systems analysis of GWAS. The software code for mixed models analysis is freely available at http://biostat.mc.vanderbilt.edu/LilyWang.

  6. Variable Selection for Generalized Varying Coefficient Partially Linear Models with Diverging Number of Parameters

    Institute of Scientific and Technical Information of China (English)

    Zheng-yan Lin; Yu-ze Yuan

    2012-01-01

    Semiparametric models with diverging number of predictors arise in many contemporary scientific areas. Variable selection for these models consists of two components: model selection for non-parametric components and selection of significant variables for the parametric portion.In this paper,we consider a variable selection procedure by combining basis function approximation with SCAD penalty.The proposed procedure simultaneously selects significant variables in the parametric components and the nonparametric components.With appropriate selection of tuning parameters,we establish the consistency and sparseness of this procedure.

  7. Complex-number representation of informed basis functions in general linear modeling of Functional Magnetic Resonance Imaging.

    Science.gov (United States)

    Wang, Pengwei; Wang, Zhishun; He, Lianghua

    2012-03-30

    Functional Magnetic Resonance Imaging (fMRI), measuring Blood Oxygen Level-Dependent (BOLD), is a widely used tool to reveal spatiotemporal pattern of neural activity in human brain. Standard analysis of fMRI data relies on a general linear model and the model is constructed by convolving the task stimuli with a hypothesized hemodynamic response function (HRF). To capture possible phase shifts in the observed BOLD response, the informed basis functions including canonical HRF and its temporal derivative, have been proposed to extend the hypothesized hemodynamic response in order to obtain a good fitting model. Different t contrasts are constructed from the estimated model parameters for detecting the neural activity between different task conditions. However, the estimated model parameters corresponding to the orthogonal basis functions have different physical meanings. It remains unclear how to combine the neural features detected by the two basis functions and construct t contrasts for further analyses. In this paper, we have proposed a novel method for representing multiple basis functions in complex domain to model the task-driven fMRI data. Using this method, we can treat each pair of model parameters, corresponding respectively to canonical HRF and its temporal derivative, as one complex number for each task condition. Using the specific rule we have defined, we can conveniently perform arithmetical operations on the estimated model parameters and generate different t contrasts. We validate this method using the fMRI data acquired from twenty-two healthy participants who underwent an auditory stimulation task.

  8. An attempt to lower sources of systematic measurement error using Hierarchical Generalized Linear Modeling (HGLM).

    Science.gov (United States)

    Sideridis, George D; Tsaousis, Ioannis; Katsis, Athanasios

    2014-01-01

    The purpose of the present studies was to test the effects of systematic sources of measurement error on the parameter estimates of scales using the Rasch model. Studies 1 and 2 tested the effects of mood and affectivity. Study 3 evaluated the effects of fatigue. Last, studies 4 and 5 tested the effects of motivation on a number of parameters of the Rasch model (e.g., ability estimates). Results indicated that (a) the parameters of interest and the psychometric properties of the scales were substantially distorted in the presence of all systematic sources of error, and, (b) the use of HGLM provides a way of adjusting the parameter estimates in the presence of these sources of error. It is concluded that validity in measurement requires a thorough evaluation of potential sources of error and appropriate adjustments based on each occasion.

  9. Generalized Linear Models of home activity for automatic detection of mild cognitive impairment in older adults.

    Science.gov (United States)

    Akl, Ahmad; Snoek, Jasper; Mihailidis, Alex

    2014-01-01

    With a globally aging population, the burden of care of cognitively impaired older adults is becoming increasingly concerning. Instances of Alzheimer's disease and other forms of dementia are becoming ever more frequent. Earlier detection of cognitive impairment offers significant benefits, but remains difficult to do in practice. In this paper, we develop statistical models of the behavior of older adults within their homes using sensor data in order to detect the early onset of cognitive decline. Specifically, we use inhomogenous Poisson processes to model the presence of subjects within different rooms throughout the day in the home using unobtrusive sensing technologies. We compare the distributions learned from cognitively intact and impaired subjects using information theoretic tools and observe statistical differences between the two populations which we believe can be used to help detect the onset of cognitive decline.

  10. SAS macro programs for geographically weighted generalized linear modeling with spatial point data: applications to health research.

    Science.gov (United States)

    Chen, Vivian Yi-Ju; Yang, Tse-Chuan

    2012-08-01

    An increasing interest in exploring spatial non-stationarity has generated several specialized analytic software programs; however, few of these programs can be integrated natively into a well-developed statistical environment such as SAS. We not only developed a set of SAS macro programs to fill this gap, but also expanded the geographically weighted generalized linear modeling (GWGLM) by integrating the strengths of SAS into the GWGLM framework. Three features distinguish our work. First, the macro programs of this study provide more kernel weighting functions than the existing programs. Second, with our codes the users are able to better specify the bandwidth selection process compared to the capabilities of existing programs. Third, the development of the macro programs is fully embedded in the SAS environment, providing great potential for future exploration of complicated spatially varying coefficient models in other disciplines. We provided three empirical examples to illustrate the use of the SAS macro programs and demonstrated the advantages explained above.

  11. Mediation analysis when a continuous mediator is measured with error and the outcome follows a generalized linear model.

    Science.gov (United States)

    Valeri, Linda; Lin, Xihong; VanderWeele, Tyler J

    2014-12-10

    Mediation analysis is a popular approach to examine the extent to which the effect of an exposure on an outcome is through an intermediate variable (mediator) and the extent to which the effect is direct. When the mediator is mis-measured, the validity of mediation analysis can be severely undermined. In this paper, we first study the bias of classical, non-differential measurement error on a continuous mediator in the estimation of direct and indirect causal effects in generalized linear models when the outcome is either continuous or discrete and exposure-mediator interaction may be present. Our theoretical results as well as a numerical study demonstrate that in the presence of non-linearities, the bias of naive estimators for direct and indirect effects that ignore measurement error can take unintuitive directions. We then develop methods to correct for measurement error. Three correction approaches using method of moments, regression calibration, and SIMEX are compared. We apply the proposed method to the Massachusetts General Hospital lung cancer study to evaluate the effect of genetic variants mediated through smoking on lung cancer risk.

  12. Misconceptions in the use of the General Linear Model applied to functional MRI: a tutorial for junior neuro-imagers

    Directory of Open Access Journals (Sweden)

    Cyril R Pernet

    2014-01-01

    Full Text Available This tutorial presents several misconceptions related to the use the General Linear Model (GLM in functional Magnetic Resonance Imaging (fMRI. The goal is not to present mathematical proofs but to educate using examples and computer code (in Matlab. In particular, I address issues related to (i model parameterization (modelling baseline or null events and scaling of the design matrix; (ii hemodynamic modelling using basis functions, and (iii computing percentage signal change. Using a simple controlled block design and an alternating block design, I first show why 'baseline' should not be modelled (model over-parameterization, and how this affects effect sizes. I also show that, depending on what is tested; over-parameterization does not necessarily impact upon statistical results. Next, using a simple periodic vs. random event related design, I show how the haemodynamic model (haemodynamic function only or using derivatives can affects parameter estimates, as well as detail the role of orthogonalization. I then relate the above results to the computation of percentage signal change. Finally, I discuss how these issues affect group analysis and give some recommendations.

  13. Effect of Smoothing in Generalized Linear Mixed Models on the Estimation of Covariance Parameters for Longitudinal Data.

    Science.gov (United States)

    Mullah, Muhammad Abu Shadeque; Benedetti, Andrea

    2016-11-01

    Besides being mainly used for analyzing clustered or longitudinal data, generalized linear mixed models can also be used for smoothing via restricting changes in the fit at the knots in regression splines. The resulting models are usually called semiparametric mixed models (SPMMs). We investigate the effect of smoothing using SPMMs on the correlation and variance parameter estimates for serially correlated longitudinal normal, Poisson and binary data. Through simulations, we compare the performance of SPMMs to other simpler methods for estimating the nonlinear association such as fractional polynomials, and using a parametric nonlinear function. Simulation results suggest that, in general, the SPMMs recover the true curves very well and yield reasonable estimates of the correlation and variance parameters. However, for binary outcomes, SPMMs produce biased estimates of the variance parameters for high serially correlated data. We apply these methods to a dataset investigating the association between CD4 cell count and time since seroconversion for HIV infected men enrolled in the Multicenter AIDS Cohort Study.

  14. The statistical performance of an MCF-7 cell culture assay evaluated using generalized linear mixed models and a score test.

    Science.gov (United States)

    Rey deCastro, B; Neuberg, Donna

    2007-05-30

    Biological assays often utilize experimental designs where observations are replicated at multiple levels, and where each level represents a separate component of the assay's overall variance. Statistical analysis of such data usually ignores these design effects, whereas more sophisticated methods would improve the statistical power of assays. This report evaluates the statistical performance of an in vitro MCF-7 cell proliferation assay (E-SCREEN) by identifying the optimal generalized linear mixed model (GLMM) that accurately represents the assay's experimental design and variance components. Our statistical assessment found that 17beta-oestradiol cell culture assay data were best modelled with a GLMM configured with a reciprocal link function, a gamma error distribution, and three sources of design variation: plate-to-plate; well-to-well, and the interaction between plate-to-plate variation and dose. The gamma-distributed random error of the assay was estimated to have a coefficient of variation (COV) = 3.2 per cent, and a variance component score test described by X. Lin found that each of the three variance components were statistically significant. The optimal GLMM also confirmed the estrogenicity of five weakly oestrogenic polychlorinated biphenyls (PCBs 17, 49, 66, 74, and 128). Based on information criteria, the optimal gamma GLMM consistently out-performed equivalent naive normal and log-normal linear models, both with and without random effects terms. Because the gamma GLMM was by far the best model on conceptual and empirical grounds, and requires only trivially more effort to use, we encourage its use and suggest that naive models be avoided when possible. Copyright 2006 John Wiley & Sons, Ltd.

  15. The overlooked potential of generalized linear models in astronomy - III. Bayesian negative binomial regression and globular cluster populations

    Science.gov (United States)

    de Souza, R. S.; Hilbe, J. M.; Buelens, B.; Riggs, J. D.; Cameron, E.; Ishida, E. E. O.; Chies-Santos, A. L.; Killedar, M.

    2015-10-01

    In this paper, the third in a series illustrating the power of generalized linear models (GLMs) for the astronomical community, we elucidate the potential of the class of GLMs which handles count data. The size of a galaxy's globular cluster (GC) population (NGC) is a prolonged puzzle in the astronomical literature. It falls in the category of count data analysis, yet it is usually modelled as if it were a continuous response variable. We have developed a Bayesian negative binomial regression model to study the connection between NGC and the following galaxy properties: central black hole mass, dynamical bulge mass, bulge velocity dispersion and absolute visual magnitude. The methodology introduced herein naturally accounts for heteroscedasticity, intrinsic scatter, errors in measurements in both axes (either discrete or continuous) and allows modelling the population of GCs on their natural scale as a non-negative integer variable. Prediction intervals of 99 per cent around the trend for expected NGC comfortably envelope the data, notably including the Milky Way, which has hitherto been considered a problematic outlier. Finally, we demonstrate how random intercept models can incorporate information of each particular galaxy morphological type. Bayesian variable selection methodology allows for automatically identifying galaxy types with different productions of GCs, suggesting that on average S0 galaxies have a GC population 35 per cent smaller than other types with similar brightness.

  16. Hierarchical multivariate mixture generalized linear models for the analysis of spatial data: An application to disease mapping.

    Science.gov (United States)

    Torabi, Mahmoud

    2016-09-01

    Disease mapping of a single disease has been widely studied in the public health setup. Simultaneous modeling of related diseases can also be a valuable tool both from the epidemiological and from the statistical point of view. In particular, when we have several measurements recorded at each spatial location, we need to consider multivariate models in order to handle the dependence among the multivariate components as well as the spatial dependence between locations. It is then customary to use multivariate spatial models assuming the same distribution through the entire population density. However, in many circumstances, it is a very strong assumption to have the same distribution for all the areas of population density. To overcome this issue, we propose a hierarchical multivariate mixture generalized linear model to simultaneously analyze spatial Normal and non-Normal outcomes. As an application of our proposed approach, esophageal and lung cancer deaths in Minnesota are used to show the outperformance of assuming different distributions for different counties of Minnesota rather than assuming a single distribution for the population density. Performance of the proposed approach is also evaluated through a simulation study. © 2016 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

  17. Projected changes in precipitation and temperature over the Canadian Prairie Provinces using the Generalized Linear Model statistical downscaling approach

    Science.gov (United States)

    Asong, Z. E.; Khaliq, M. N.; Wheater, H. S.

    2016-08-01

    In this study, a multisite multivariate statistical downscaling approach based on the Generalized Linear Model (GLM) framework is developed to downscale daily observations of precipitation and minimum and maximum temperatures from 120 sites located across the Canadian Prairie Provinces: Alberta, Saskatchewan and Manitoba. First, large scale atmospheric covariates from the National Center for Environmental Prediction (NCEP) Reanalysis-I, teleconnection indices, geographical site attributes, and observed precipitation and temperature records are used to calibrate GLMs for the 1971-2000 period. Then the calibrated models are used to generate daily sequences of precipitation and temperature for the 1962-2005 historical (conditioned on NCEP predictors), and future period (2006-2100) using outputs from five CMIP5 (Coupled Model Intercomparison Project Phase-5) Earth System Models corresponding to Representative Concentration Pathway (RCP): RCP2.6, RCP4.5, and RCP8.5 scenarios. The results indicate that the fitted GLMs are able to capture spatiotemporal characteristics of observed precipitation and temperature fields. According to the downscaled future climate, mean precipitation is projected to increase in summer and decrease in winter while minimum temperature is expected to warm faster than the maximum temperature. Climate extremes are projected to intensify with increased radiative forcing.

  18. A comparative study of generalized linear mixed modelling and artificial neural network approach for the joint modelling of survival and incidence of Dengue patients in Sri Lanka

    Science.gov (United States)

    Hapugoda, J. C.; Sooriyarachchi, M. R.

    2017-09-01

    Survival time of patients with a disease and the incidence of that particular disease (count) is frequently observed in medical studies with the data of a clustered nature. In many cases, though, the survival times and the count can be correlated in a way that, diseases that occur rarely could have shorter survival times or vice versa. Due to this fact, joint modelling of these two variables will provide interesting and certainly improved results than modelling these separately. Authors have previously proposed a methodology using Generalized Linear Mixed Models (GLMM) by joining the Discrete Time Hazard model with the Poisson Regression model to jointly model survival and count model. As Aritificial Neural Network (ANN) has become a most powerful computational tool to model complex non-linear systems, it was proposed to develop a new joint model of survival and count of Dengue patients of Sri Lanka by using that approach. Thus, the objective of this study is to develop a model using ANN approach and compare the results with the previously developed GLMM model. As the response variables are continuous in nature, Generalized Regression Neural Network (GRNN) approach was adopted to model the data. To compare the model fit, measures such as root mean square error (RMSE), absolute mean error (AME) and correlation coefficient (R) were used. The measures indicate the GRNN model fits the data better than the GLMM model.

  19. Linear models with R

    CERN Document Server

    Faraway, Julian J

    2014-01-01

    A Hands-On Way to Learning Data AnalysisPart of the core of statistics, linear models are used to make predictions and explain the relationship between the response and the predictors. Understanding linear models is crucial to a broader competence in the practice of statistics. Linear Models with R, Second Edition explains how to use linear models in physical science, engineering, social science, and business applications. The book incorporates several improvements that reflect how the world of R has greatly expanded since the publication of the first edition.New to the Second EditionReorganiz

  20. Use of reflectance spectrophotometry and colorimetry in a general linear model for the determination of the age of bruises.

    Science.gov (United States)

    Hughes, Vanessa K; Langlois, Neil E I

    2010-12-01

    Bruises can have medicolegal significance such that the age of a bruise may be an important issue. This study sought to determine if colorimetry or reflectance spectrophotometry could be employed to objectively estimate the age of bruises. Based on a previously described method, reflectance spectrophotometric scans were obtained from bruises using a Cary 100 Bio spectrophotometer fitted with a fibre-optic reflectance probe. Measurements were taken from the bruise and a control area. Software was used to calculate the first derivative at 490 and 480 nm; the proportion of oxygenated hemoglobin was calculated using an isobestic point method and a software application converted the scan data into colorimetry data. In addition, data on factors that might be associated with the determination of the age of a bruise: subject age, subject sex, degree of trauma, bruise size, skin color, body build, and depth of bruise were recorded. From 147 subjects, 233 reflectance spectrophotometry scans were obtained for analysis. The age of the bruises ranged from 0.5 to 231.5 h. A General Linear Model analysis method was used. This revealed that colorimetric measurement of the yellowness of a bruise accounted for 13% of the bruise age. By incorporation of the other recorded data (as above), yellowness could predict up to 32% of the age of a bruise-implying that 68% of the variation was dependent on other factors. However, critical appraisal of the model revealed that the colorimetry method of determining the age of a bruise was affected by skin tone and required a measure of the proportion of oxygenated hemoglobin, which is obtained by spectrophotometric methods. Using spectrophotometry, the first derivative at 490 nm alone accounted for 18% of the bruise age estimate. When additional factors (subject sex, bruise depth and oxygenation of hemoglobin) were included in the General Linear Model this increased to 31%-implying that 69% of the variation was dependent on other factors. This

  1. A Community Needs Index for Adolescent Pregnancy Prevention Program Planning: Application of Spatial Generalized Linear Mixed Models.

    Science.gov (United States)

    Johnson, Glen D; Mesler, Kristine; Kacica, Marilyn A

    2017-02-06

    Objective The objective is to estimate community needs with respect to risky adolescent sexual behavior in a way that is risk-adjusted for multiple community factors. Methods Generalized linear mixed modeling was applied for estimating teen pregnancy and sexually transmitted disease (STD) incidence by postal ZIP code in New York State, in a way that adjusts for other community covariables and residual spatial autocorrelation. A community needs index was then obtained by summing the risk-adjusted estimates of pregnancy and STD cases. Results Poisson regression with a spatial random effect was chosen among competing modeling approaches. Both the risk-adjusted caseloads and rates were computed for ZIP codes, which allowed risk-based prioritization to help guide funding decisions for a comprehensive adolescent pregnancy prevention program. Conclusions This approach provides quantitative evidence of community needs with respect to risky adolescent sexual behavior, while adjusting for other community-level variables and stabilizing estimates in areas with small populations. Therefore, it was well accepted by the affected groups and proved valuable for program planning. This methodology may also prove valuable for follow up program evaluation. Current research is directed towards further improving the statistical modeling approach and applying to different health and behavioral outcomes, along with different predictor variables.

  2. Dimension of linear models

    DEFF Research Database (Denmark)

    Høskuldsson, Agnar

    1996-01-01

    Determination of the proper dimension of a given linear model is one of the most important tasks in the applied modeling work. We consider here eight criteria that can be used to determine the dimension of the model, or equivalently, the number of components to use in the model. Four...... the basic problems in determining the dimension of linear models. Then each of the eight measures are treated. The results are illustrated by examples....

  3. Nested generalized linear mixed model with ordinal response: Simulation and application on poverty data in Java Island

    Science.gov (United States)

    Widyaningsih, Yekti; Saefuddin, Asep; Notodiputro, Khairil A.; Wigena, Aji H.

    2012-05-01

    The objective of this research is to build a nested generalized linear mixed model using an ordinal response variable with some covariates. There are three main jobs in this paper, i.e. parameters estimation procedure, simulation, and implementation of the model for the real data. At the part of parameters estimation procedure, concepts of threshold, nested random effect, and computational algorithm are described. The simulations data are built for 3 conditions to know the effect of different parameter values of random effect distributions. The last job is the implementation of the model for the data about poverty in 9 districts of Java Island. The districts are Kuningan, Karawang, and Majalengka chose randomly in West Java; Temanggung, Boyolali, and Cilacap from Central Java; and Blitar, Ngawi, and Jember from East Java. The covariates in this model are province, number of bad nutrition cases, number of farmer families, and number of health personnel. In this modeling, all covariates are grouped as ordinal scale. Unit observation in this research is sub-district (kecamatan) nested in district, and districts (kabupaten) are nested in province. For the result of simulation, ARB (Absolute Relative Bias) and RRMSE (Relative Root of mean square errors) scale is used. They show that prov parameters have the highest bias, but more stable RRMSE in all conditions. The simulation design needs to be improved by adding other condition, such as higher correlation between covariates. Furthermore, as the result of the model implementation for the data, only number of farmer family and number of medical personnel have significant contributions to the level of poverty in Central Java and East Java province, and only district 2 (Karawang) of province 1 (West Java) has different random effect from the others. The source of the data is PODES (Potensi Desa) 2008 from BPS (Badan Pusat Statistik).

  4. A revised linear ozone photochemistry parameterization for use in transport and general circulation models: multi-annual simulations

    Directory of Open Access Journals (Sweden)

    D. Cariolle

    2007-01-01

    Full Text Available This article describes the validation of a linear parameterization of the ozone photochemistry for use in upper tropospheric and stratospheric studies. The present work extends a previously developed scheme by improving the 2-D model used to derive the coefficients of the parameterization. The chemical reaction rates are updated from a compilation that includes recent laboratory work. Furthermore, the polar ozone destruction due to heterogeneous reactions at the surface of the polar stratospheric clouds is taken into account as a function of the stratospheric temperature and the total chlorine content. Two versions of the parameterization are tested. The first one only requires the solution of a continuity equation for the time evolution of the ozone mixing ratio, the second one uses one additional equation for a cold tracer. The parameterization has been introduced into the chemical transport model MOCAGE. The model is integrated with wind and temperature fields from the ECMWF operational analyses over the period 2000–2004. Overall, the results from the two versions show a very good agreement between the modelled ozone distribution and the Total Ozone Mapping Spectrometer (TOMS satellite data and the "in-situ" vertical soundings. During the course of the integration the model does not show any drift and the biases are generally small, of the order of 10%. The model also reproduces fairly well the polar ozone variability, notably the formation of "ozone holes" in the Southern Hemisphere with amplitudes and a seasonal evolution that follow the dynamics and time evolution of the polar vortex. The introduction of the cold tracer further improves the model simulation by allowing additional ozone destruction inside air masses exported from the high to the mid-latitudes, and by maintaining low ozone content inside the polar vortex of the Southern Hemisphere over longer periods in spring time. It is concluded that for the study of climate scenarios

  5. Sample size calculation based on generalized linear models for differential expression analysis in RNA-seq data.

    Science.gov (United States)

    Li, Chung-I; Shyr, Yu

    2016-12-01

    As RNA-seq rapidly develops and costs continually decrease, the quantity and frequency of samples being sequenced will grow exponentially. With proteomic investigations becoming more multivariate and quantitative, determining a study's optimal sample size is now a vital step in experimental design. Current methods for calculating a study's required sample size are mostly based on the hypothesis testing framework, which assumes each gene count can be modeled through Poisson or negative binomial distributions; however, these methods are limited when it comes to accommodating covariates. To address this limitation, we propose an estimating procedure based on the generalized linear model. This easy-to-use method constructs a representative exemplary dataset and estimates the conditional power, all without requiring complicated mathematical approximations or formulas. Even more attractive, the downstream analysis can be performed with current R/Bioconductor packages. To demonstrate the practicability and efficiency of this method, we apply it to three real-world studies, and introduce our on-line calculator developed to determine the optimal sample size for a RNA-seq study.

  6. Homology stability for the general linear group

    NARCIS (Netherlands)

    Maazen, Hendrik

    1979-01-01

    This thesis studies the homology stability problem for general linear groups over Euclidean rings and over subrings of the field of rational numbers. Affine linear groups, acting on affine space rather than linear space, are also considered. In order to get stability results one establishes that cer

  7. Homology stability for the general linear group

    NARCIS (Netherlands)

    Maazen, Hendrik

    1979-01-01

    This thesis studies the homology stability problem for general linear groups over Euclidean rings and over subrings of the field of rational numbers. Affine linear groups, acting on affine space rather than linear space, are also considered. In order to get stability results one establishes that

  8. Mapping the annual exceedance frequencies of the PM10 air quality standard - Comparing kriging to a generalized linear spatial model

    CSIR Research Space (South Africa)

    Khuluse, S

    2013-11-01

    Full Text Available compare ordinary and regression kriging models to the Poisson log-linear spatial model (Diggle et al. 1998, Diggle et al. 2007) with and without covariate information in mapping annual average exceedance frequencies of the South African PM10 air quality...

  9. SNP_NLMM: A SAS Macro to Implement a Flexible Random Effects Density for Generalized Linear and Nonlinear Mixed Models.

    Science.gov (United States)

    Vock, David M; Davidian, Marie; Tsiatis, Anastasios A

    2014-01-01

    Generalized linear and nonlinear mixed models (GMMMs and NLMMs) are commonly used to represent non-Gaussian or nonlinear longitudinal or clustered data. A common assumption is that the random effects are Gaussian. However, this assumption may be unrealistic in some applications, and misspecification of the random effects density may lead to maximum likelihood parameter estimators that are inconsistent, biased, and inefficient. Because testing if the random effects are Gaussian is difficult, previous research has recommended using a flexible random effects density. However, computational limitations have precluded widespread use of flexible random effects densities for GLMMs and NLMMs. We develop a SAS macro, SNP_NLMM, that overcomes the computational challenges to fit GLMMs and NLMMs where the random effects are assumed to follow a smooth density that can be represented by the seminonparametric formulation proposed by Gallant and Nychka (1987). The macro is flexible enough to allow for any density of the response conditional on the random effects and any nonlinear mean trajectory. We demonstrate the SNP_NLMM macro on a GLMM of the disease progression of toenail infection and on a NLMM of intravenous drug concentration over time.

  10. Gamma generalized linear model to investigate the effects of climate variables on the area burned by forest fire in northeast China

    Institute of Scientific and Technical Information of China (English)

    Futao Guo; Guangyu Wang; John L Innes; Xiangqing Ma; Long Sun; Haiqing Hu

    2015-01-01

    The purpose of this study was to determine a suitable model for investigating the effects of climate factors on the area burned by forest fire in the Tahe forest region, Daxing’an Mountains, in northeast China. The response variables were the area burned by lightning-caused fire, human-caused fire, and total burned area. The predictor variables were nine climate variables collected from the local weather station. Three regression models were utilized, including multiple linear regression, log-linear model (log-transformation on both response and predictor variables), and gamma-generalized linear model. The goodness-of-fit of the models were compared based on model fitting statistics such as R2, AIC, and RMSE. The results revealed that the gamma-generalized linear model was generally superior to both multiple linear regression model and log-linear model for fitting the fire data. Further, the best models were selected based on the criteria that the climate variables were statistically significant at a=0.05. The gamma best models indicated that maximum wind speed, precipitation, and days that rainfall greater than 0.1 mm had significant impacts on the area burned by the lightning-caused fire, while the mean temperature and minimum relative humidity were the main drivers of the burned area caused by human activities. Overall, the total burned area by forest fire was significantly influenced by days that rainfall greater than 0.1 mm and minimum rela-tive humidity, indicating that the moisture condition of forest stands determine the burned area by forest fire.

  11. Direct 4D parametric imaging for linearized models of reversibly binding PET tracers using generalized AB-EM reconstruction

    Science.gov (United States)

    Rahmim, Arman; Zhou, Yun; Tang, Jing; Lu, Lijun; Sossi, Vesna; Wong, Dean F.

    2012-02-01

    Due to high noise levels in the voxel kinetics, development of reliable parametric imaging algorithms remains one of most active areas in dynamic brain PET imaging, which in the vast majority of cases involves receptor/transporter studies with reversibly binding tracers. As such, the focus of this work has been to develop a novel direct 4D parametric image reconstruction scheme for such tracers. Based on a relative equilibrium (RE) graphical analysis formulation (Zhou et al 2009b Neuroimage 44 661-70), we developed a closed-form 4D EM algorithm to directly reconstruct distribution volume (DV) parametric images within a plasma input model, as well as DV ratio (DVR) images within a reference tissue model scheme (wherein an initial reconstruction was used to estimate the reference tissue time-activity curves). A particular challenge with the direct 4D EM formulation is that the intercept parameters in graphical (linearized) analysis of reversible tracers (e.g. Logan or RE analysis) are commonly negative (unlike for irreversible tracers, e.g. using Patlak analysis). Subsequently, we focused our attention on the AB-EM algorithm, derived by Byrne (1998, Inverse Problems 14 1455-67) to allow inclusion of prior information about the lower (A) and upper (B) bounds for image values. We then generalized this algorithm to the 4D EM framework, thus allowing negative intercept parameters. Furthermore, our 4D AB-EM algorithm incorporated and emphasized the use of spatially varying lower bounds to achieve enhanced performance. As validation, the means of parameters estimated from 55 human 11C-raclopride dynamic PET studies were used for extensive simulations using a mathematical brain phantom. Images were reconstructed using conventional indirect as well as proposed direct parametric imaging methods. Noise versus bias quantitative measurements were performed in various regions of the brain. Direct 4D EM reconstruction resulted in notable qualitative and quantitative accuracy

  12. Inference in regression models of heavily skewed alcohol use data: a comparison of ordinary least squares, generalized linear models, and bootstrap resampling.

    Science.gov (United States)

    Neal, Dan J; Simons, Jeffrey S

    2007-12-01

    Analysis of alcohol use data and other low base rate risk behaviors using ordinary least squares regression models can be problematic. This article presents 2 alternative statistical approaches, generalized linear models and bootstrapping, that may be more appropriate for such data. First, the basic theory behind the approaches is presented. Then, using a data set of alcohol use behaviors and consequences, results based on these approaches are contrasted with the results from ordinary least squares regression. The less traditional approaches consistently demonstrated better fit with model assumptions, as demonstrated by graphical analysis of residuals, and identified more significant variables potentially resulting in theoretically different interpretations of the models of alcohol use. In conclusion, these models show significant promise for furthering the understanding of alcohol-related behaviors.

  13. A generalized Lyapunov theory for robust root clustering of linear state space models with real parameter uncertainty

    Science.gov (United States)

    Yedavalli, R. K.

    1992-01-01

    The problem of analyzing and designing controllers for linear systems subject to real parameter uncertainty is considered. An elegant, unified theory for robust eigenvalue placement is presented for a class of D-regions defined by algebraic inequalities by extending the nominal matrix root clustering theory of Gutman and Jury (1981) to linear uncertain time systems. The author presents explicit conditions for matrix root clustering for different D-regions and establishes the relationship between the eigenvalue migration range and the parameter range. The bounds are all obtained by one-shot computation in the matrix domain and do not need any frequency sweeping or parameter gridding. The method uses the generalized Lyapunov theory for getting the bounds.

  14. A generalized Lyapunov theory for robust root clustering of linear state space models with real parameter uncertainty

    Science.gov (United States)

    Yedavalli, R. K.

    1992-01-01

    The problem of analyzing and designing controllers for linear systems subject to real parameter uncertainty is considered. An elegant, unified theory for robust eigenvalue placement is presented for a class of D-regions defined by algebraic inequalities by extending the nominal matrix root clustering theory of Gutman and Jury (1981) to linear uncertain time systems. The author presents explicit conditions for matrix root clustering for different D-regions and establishes the relationship between the eigenvalue migration range and the parameter range. The bounds are all obtained by one-shot computation in the matrix domain and do not need any frequency sweeping or parameter gridding. The method uses the generalized Lyapunov theory for getting the bounds.

  15. Inferential Models for Linear Regression

    Directory of Open Access Journals (Sweden)

    Zuoyi Zhang

    2011-09-01

    Full Text Available Linear regression is arguably one of the most widely used statistical methods in applications.  However, important problems, especially variable selection, remain a challenge for classical modes of inference.  This paper develops a recently proposed framework of inferential models (IMs in the linear regression context.  In general, an IM is able to produce meaningful probabilistic summaries of the statistical evidence for and against assertions about the unknown parameter of interest and, moreover, these summaries are shown to be properly calibrated in a frequentist sense.  Here we demonstrate, using simple examples, that the IM framework is promising for linear regression analysis --- including model checking, variable selection, and prediction --- and for uncertain inference in general.

  16. Accuracy assessment of the linear Poisson-Boltzmann equation and reparametrization of the OBC generalized Born model for nucleic acids and nucleic acid-protein complexes.

    Science.gov (United States)

    Fogolari, Federico; Corazza, Alessandra; Esposito, Gennaro

    2015-04-05

    The generalized Born model in the Onufriev, Bashford, and Case (Onufriev et al., Proteins: Struct Funct Genet 2004, 55, 383) implementation has emerged as one of the best compromises between accuracy and speed of computation. For simulations of nucleic acids, however, a number of issues should be addressed: (1) the generalized Born model is based on a linear model and the linearization of the reference Poisson-Boltmann equation may be questioned for highly charged systems as nucleic acids; (2) although much attention has been given to potentials, solvation forces could be much less sensitive to linearization than the potentials; and (3) the accuracy of the Onufriev-Bashford-Case (OBC) model for nucleic acids depends on fine tuning of parameters. Here, we show that the linearization of the Poisson Boltzmann equation has mild effects on computed forces, and that with optimal choice of the OBC model parameters, solvation forces, essential for molecular dynamics simulations, agree well with those computed using the reference Poisson-Boltzmann model. © 2015 Wiley Periodicals, Inc.

  17. A semiparametric negative binomial generalized linear model for modeling over-dispersed count data with a heavy tail: Characteristics and applications to crash data.

    Science.gov (United States)

    Shirazi, Mohammadali; Lord, Dominique; Dhavala, Soma Sekhar; Geedipally, Srinivas Reddy

    2016-06-01

    Crash data can often be characterized by over-dispersion, heavy (long) tail and many observations with the value zero. Over the last few years, a small number of researchers have started developing and applying novel and innovative multi-parameter models to analyze such data. These multi-parameter models have been proposed for overcoming the limitations of the traditional negative binomial (NB) model, which cannot handle this kind of data efficiently. The research documented in this paper continues the work related to multi-parameter models. The objective of this paper is to document the development and application of a flexible NB generalized linear model with randomly distributed mixed effects characterized by the Dirichlet process (NB-DP) to model crash data. The objective of the study was accomplished using two datasets. The new model was compared to the NB and the recently introduced model based on the mixture of the NB and Lindley (NB-L) distributions. Overall, the research study shows that the NB-DP model offers a better performance than the NB model once data are over-dispersed and have a heavy tail. The NB-DP performed better than the NB-L when the dataset has a heavy tail, but a smaller percentage of zeros. However, both models performed similarly when the dataset contained a large amount of zeros. In addition to a greater flexibility, the NB-DP provides a clustering by-product that allows the safety analyst to better understand the characteristics of the data, such as the identification of outliers and sources of dispersion.

  18. McDonald Generalized Linear Failure Rate Distribution

    Directory of Open Access Journals (Sweden)

    Ibrahim Elbatal

    2014-10-01

    Full Text Available We introduce in this paper a new six-parameters generalized version of the generalized linear failure rate (GLFR distribution which is called McDonald Generalized Linear failure rate (McGLFR distribution. The new distribution is quite flexible and can be used effectively in modeling survival data and reliability problems. It can have a constant, decreasing, increasing, and upside down bathtub-and bathtub shaped failure rate function depending on its parameters. It includes some well-known lifetime distributions as special sub-models. Some structural properties of the new distribution are studied. Moreover we discuss maximum likelihood estimation of the unknown parameters of the new model.

  19. Linear Logistic Test Modeling with R

    Science.gov (United States)

    Baghaei, Purya; Kubinger, Klaus D.

    2015-01-01

    The present paper gives a general introduction to the linear logistic test model (Fischer, 1973), an extension of the Rasch model with linear constraints on item parameters, along with eRm (an R package to estimate different types of Rasch models; Mair, Hatzinger, & Mair, 2014) functions to estimate the model and interpret its parameters. The…

  20. General linear dynamics - quantum, classical or hybrid

    CERN Document Server

    Elze, H-T; Vallone, F

    2011-01-01

    We describe our recent proposal of a path integral formulation of classical Hamiltonian dynamics. Which leads us here to a new attempt at hybrid dynamics, which concerns the direct coupling of classical and quantum mechanical degrees of freedom. This is of practical as well as of foundational interest and no fully satisfactory solution of this problem has been established to date. Related aspects will be observed in a general linear ensemble theory, which comprises classical and quantum dynamics in the form of Liouville and von Neumann equations, respectively, as special cases. Considering the simplest object characterized by a two-dimensional state-space, we illustrate how quantum mechanics is special in several respects among possible linear generalizations.

  1. Testing for one Generalized Linear Single Order Parameter

    DEFF Research Database (Denmark)

    Ellegaard, Niels Langager; Christensen, Tage Emil; Dyre, Jeppe

    work the order parameter may be chosen to have a non-exponential relaxation. The model predictions contradict the general consensus of the properties of viscous liquids in two ways: (i) The model predicts that following a linear isobaric temperature step, the normalized volume and entalpy relaxation...... functions are identical. This assumption conflicts with some (but not all) reports, utilizing the Tool-Narayanaswamy formalism to extrapolate from non-linear measurements to the linear regime. (ii) The model predicts that the theoretical "linear Prigogine-Defay" ratio is one. This ratio has never been...... responses or extrapolate from measurements of a glassy state away from equilibrium. Starting from a master equation description of inherent dynamics, we calculate the complex thermodynamic response functions. We device a way of testing for the generalized single order parameter model by measuring 3 complex...

  2. GENERALIZED DERIVATIONS ON PARABOLIC SUBALGEBRAS OF GENERAL LINEAR LIE ALGEBRAS

    Institute of Scientific and Technical Information of China (English)

    陈正新

    2014-01-01

    Let P be a parabolic subalgebra of a general linear Lie algebra gl(n, F) over a field F, where n ≥ 3, F contains at least n different elements, and char(F) 6= 2. In this article, we prove that generalized derivations, quasiderivations, and product zero derivations of P coincide, and any generalized derivation of P is a sum of an inner derivation, a central quasiderivation, and a scalar multiplication map of P. We also show that any commuting automorphism of P is a central automorphism, and any commuting derivation of P is a central derivation.

  3. [General practice--linear thinking and complexity].

    Science.gov (United States)

    Stalder, H

    2006-09-27

    As physicians, we apply and teach linear thinking. This approach permits to dissect the patient's problem to the molecular level and has contributed enormously to the knowledge and progress of medicine. The linear approach is particularly useful in medical education, in quantitative research and helps to resolve simple problems. However, it risks to be rigid. Living beings (such as patients and physicians!) have to be considered as complex systems. A complex system cannot be dissected into its parts without losing its identity. It is dependent on its past and interactions with the outside are often followed by unpredictable reactions. The patient-centred approach in medicine permits the physician, a complex system himself, to integrate the patient's system and to adapt to his reality. It is particularly useful in general medicine.

  4. Penalized maximum likelihood estimation for generalized linear point processes

    DEFF Research Database (Denmark)

    Hansen, Niels Richard

    2010-01-01

    A generalized linear point process is specified in terms of an intensity that depends upon a linear predictor process through a fixed non-linear function. We present a framework where the linear predictor is parametrized by a Banach space and give results on Gateaux differentiability of the log-likelihood....... Of particular interest is when the intensity is expressed in terms of a linear filter parametrized by a Sobolev space. Using that the Sobolev spaces are reproducing kernel Hilbert spaces we derive results on the representation of the penalized maximum likelihood estimator in a special case and the gradient...... of the negative log-likelihood in general. The latter is used to develop a descent algorithm in the Sobolev space. We conclude the paper by extensions to multivariate and additive model specifications. The methods are implemented in the R-package ppstat....

  5. Linear causal modeling with structural equations

    CERN Document Server

    Mulaik, Stanley A

    2009-01-01

    Emphasizing causation as a functional relationship between variables that describe objects, Linear Causal Modeling with Structural Equations integrates a general philosophical theory of causation with structural equation modeling (SEM) that concerns the special case of linear causal relations. In addition to describing how the functional relation concept may be generalized to treat probabilistic causation, the book reviews historical treatments of causation and explores recent developments in experimental psychology on studies of the perception of causation. It looks at how to perceive causal

  6. Classification of Normal and Pre-Ictal EEG Signals Using Permutation Entropies and a Generalized Linear Model as a Classifier

    Directory of Open Access Journals (Sweden)

    Francisco O. Redelico

    2017-02-01

    Full Text Available In this contribution, a comparison between different permutation entropies as classifiers of electroencephalogram (EEG records corresponding to normal and pre-ictal states is made. A discrete probability distribution function derived from symbolization techniques applied to the EEG signal is used to calculate the Tsallis entropy, Shannon Entropy, Renyi Entropy, and Min Entropy, and they are used separately as the only independent variable in a logistic regression model in order to evaluate its capacity as a classification variable in a inferential manner. The area under the Receiver Operating Characteristic (ROC curve, along with the accuracy, sensitivity, and specificity are used to compare the models. All the permutation entropies are excellent classifiers, with an accuracy greater than 94.5% in every case, and a sensitivity greater than 97%. Accounting for the amplitude in the symbolization technique retains more information of the signal than its counterparts, and it could be a good candidate for automatic classification of EEG signals.

  7. On the unitarity of linearized General Relativity coupled to matter

    CERN Document Server

    Atkins, Michael

    2010-01-01

    We consider the unitarity of the S-matrix for linearized General Relativity coupled to particle physics models. Taking renormalization group effects of the Planck mass into account, we find that the scale at which unitarity is violated is strongly dependent on the particle content of the theory. We find that the requirement that the S-matrix be unitary up to the scale at which quantum gravitational effects become strong implies a bound on the particle content of the model.

  8. Functional linear models

    OpenAIRE

    2015-01-01

    This work aims at the exposition of two different results we have obtained in Functional Data Analysis. The first is a variable selection method in Functional Regression which is an adaptation of the well known Lasso technique. The second is a brand new Random Walk test for Functional Time Series. Being the results afferent to different areas of Functional Data Analysis, as well as of general Statistics, the introduction will be divided in three parts. Firstly we expose the fundament...

  9. Exact Solutions in Nonlocal Linear Models

    OpenAIRE

    Vernov, S. Yu.

    2008-01-01

    A general class of cosmological models driven by a nonlocal scalar field inspired by the string field theory is studied. Using the fact that the considering linear nonlocal model is equivalent to an infinite number of local models we have found an exact special solution of the nonlocal Friedmann equations. This solution describes a monotonically increasing Universe with the phantom dark energy.

  10. On the characterization of dynamic supramolecular systems: a general mathematical association model for linear supramolecular copolymers and application on a complex two-component hydrogen-bonding system.

    Science.gov (United States)

    Odille, Fabrice G J; Jónsson, Stefán; Stjernqvist, Susann; Rydén, Tobias; Wärnmark, Kenneth

    2007-01-01

    A general mathematical model for the characterization of the dynamic (kinetically labile) association of supramolecular assemblies in solution is presented. It is an extension of the equal K (EK) model by the stringent use of linear algebra to allow for the simultaneous presence of an unlimited number of different units in the resulting assemblies. It allows for the analysis of highly complex dynamic equilibrium systems in solution, including both supramolecular homo- and copolymers without the recourse to extensive approximations, in a field in which other analytical methods are difficult. The derived mathematical methodology makes it possible to analyze dynamic systems such as supramolecular copolymers regarding for instance the degree of polymerization, the distribution of a given monomer in different copolymers as well as its position in an aggregate. It is to date the only general means to characterize weak supramolecular systems. The model was fitted to NMR dilution titration data by using the program Matlab, and a detailed algorithm for the optimization of the different parameters has been developed. The methodology is applied to a case study, a hydrogen-bonded supramolecular system, salen 4+porphyrin 5. The system is formally a two-component system but in reality a three-component system. This results in a complex dynamic system in which all monomers are associated to each other by hydrogen bonding with different association constants, resulting in homo- and copolymers 4n5m as well as cyclic structures 6 and 7, in addition to free 4 and 5. The system was analyzed by extensive NMR dilution titrations at variable temperatures. All chemical shifts observed at different temperatures were used in the fitting to obtain the DeltaH degrees and DeltaS degrees values producing the best global fit. From the derived general mathematical expressions, system 4+5 could be characterized with respect to above-mentioned parameters.

  11. Development of the Complex General Linear Model in the Fourier Domain: Application to fMRI Multiple Input-Output Evoked Responses for Single Subjects

    Directory of Open Access Journals (Sweden)

    Daniel E. Rio

    2013-01-01

    Full Text Available A linear time-invariant model based on statistical time series analysis in the Fourier domain for single subjects is further developed and applied to functional MRI (fMRI blood-oxygen level-dependent (BOLD multivariate data. This methodology was originally developed to analyze multiple stimulus input evoked response BOLD data. However, to analyze clinical data generated using a repeated measures experimental design, the model has been extended to handle multivariate time series data and demonstrated on control and alcoholic subjects taken from data previously analyzed in the temporal domain. Analysis of BOLD data is typically carried out in the time domain where the data has a high temporal correlation. These analyses generally employ parametric models of the hemodynamic response function (HRF where prewhitening of the data is attempted using autoregressive (AR models for the noise. However, this data can be analyzed in the Fourier domain. Here, assumptions made on the noise structure are less restrictive, and hypothesis tests can be constructed based on voxel-specific nonparametric estimates of the hemodynamic transfer function (HRF in the Fourier domain. This is especially important for experimental designs involving multiple states (either stimulus or drug induced that may alter the form of the response function.

  12. Explorative methods in linear models

    DEFF Research Database (Denmark)

    Høskuldsson, Agnar

    2004-01-01

    The author has developed the H-method of mathematical modeling that builds up the model by parts, where each part is optimized with respect to prediction. Besides providing with better predictions than traditional methods, these methods provide with graphic procedures for analyzing different feat...... features in data. These graphic methods extend the well-known methods and results of Principal Component Analysis to any linear model. Here the graphic procedures are applied to linear regression and Ridge Regression....

  13. Explorative methods in linear models

    DEFF Research Database (Denmark)

    Høskuldsson, Agnar

    2004-01-01

    The author has developed the H-method of mathematical modeling that builds up the model by parts, where each part is optimized with respect to prediction. Besides providing with better predictions than traditional methods, these methods provide with graphic procedures for analyzing different...... features in data. These graphic methods extend the well-known methods and results of Principal Component Analysis to any linear model. Here the graphic procedures are applied to linear regression and Ridge Regression....

  14. Linear Logistic Test Modeling with R

    Directory of Open Access Journals (Sweden)

    Purya Baghaei

    2014-01-01

    Full Text Available The present paper gives a general introduction to the linear logistic test model (Fischer, 1973, an extension of the Rasch model with linear constraints on item parameters, along with eRm (an R package to estimate different types of Rasch models; Mair, Hatzinger, & Mair, 2014 functions to estimate the model and interpret its parameters. The applications of the model in test validation, hypothesis testing, cross-cultural studies of test bias, rule-based item generation, and investigating construct irrelevant factors which contribute to item difficulty are explained. The model is applied to an English as a foreign language reading comprehension test and the results are discussed.

  15. General practice--linear thinking and complexity

    National Research Council Canada - National Science Library

    Stalder, H

    2006-01-01

    As physicians, we apply and teach linear thinking. This approach permits to dissect the patient's problem to the molecular level and has contributed enormously to the knowledge and progress of medicine...

  16. Assessment of Brown Bear\\'s (Ursus arctos syriacus Winter Habitat Using Geographically Weighted Regression and Generalized Linear Model in South of Iran

    Directory of Open Access Journals (Sweden)

    A. A. Zarei

    2016-03-01

    Full Text Available Winter dens are one of the important components of brown bear's (Ursus arctos syriacus habitat, affecting their reproduction and survival. Therefore identification of factors affecting the habitat selection and suitable denning areas in the conservation of our largest carnivore is necessary. We used Geographically Weighted Logistic Regression (GWLR and Generalized Linear Model (GLM for modeling suitability of denning habitat in Kouhkhom region in Fars province. In the present research, 20 dens (presence locations and 20 caves where signs of bear were not found (absence locations were used as dependent variables and six environmental factors were used for each location as independent variables. The results of GLM showed that variables of distance to settlements, altitude, and distance to water were the most important parameters affecting suitability of the brown bear's denning habitat. The results of GWLR showed the significant local variations in the relationship between occurrence of brown bear dens and the variable of distance to settlements. Based on the results of both models, suitable habitats for denning of the species are impassable areas in the mountains and inaccessible for humans.

  17. Bayesian inference for generalized linear mixed models with predictors subject to detection limits: an approach that leverages information from auxiliary variables.

    Science.gov (United States)

    Yue, Yu Ryan; Wang, Xiao-Feng

    2016-05-10

    This paper is motivated from a retrospective study of the impact of vitamin D deficiency on the clinical outcomes for critically ill patients in multi-center critical care units. The primary predictors of interest, vitamin D2 and D3 levels, are censored at a known detection limit. Within the context of generalized linear mixed models, we investigate statistical methods to handle multiple censored predictors in the presence of auxiliary variables. A Bayesian joint modeling approach is proposed to fit the complex heterogeneous multi-center data, in which the data information is fully used to estimate parameters of interest. Efficient Monte Carlo Markov chain algorithms are specifically developed depending on the nature of the response. Simulation studies demonstrate the outperformance of the proposed Bayesian approach over other existing methods. An application to the data set from the vitamin D deficiency study is presented. Possible extensions of the method regarding the absence of auxiliary variables, semiparametric models, as well as the type of censoring are also discussed.

  18. Neural Generalized Predictive Control of a non-linear Process

    DEFF Research Database (Denmark)

    Sørensen, Paul Haase; Nørgård, Peter Magnus; Ravn, Ole

    1998-01-01

    The use of neural network in non-linear control is made difficult by the fact the stability and robustness is not guaranteed and that the implementation in real time is non-trivial. In this paper we introduce a predictive controller based on a neural network model which has promising stability...... detail and discuss the implementation difficulties. The neural generalized predictive controller is tested on a pneumatic servo sys-tem....

  19. Spinal fMRI during proprioceptive and tactile tasks in healthy subjects: activity detected using cross-correlation, general linear model and independent component analysis

    Energy Technology Data Exchange (ETDEWEB)

    Valsasina, P.; Agosta, F.; Filippi, M. [Scientific Institute Ospedale San Raffaele, Neuroimaging Research Unit, Milan (Italy); Caputo, D. [Scientific Institute Fondazione Don Gnocchi, Department of Neurology, Milan (Italy); Stroman, P.W. [Queen' s University, Department of Diagnostic Radiology, Centre for Neuroscience Studies, Kingston, ON (Canada)

    2008-10-15

    Functional MRI (fMRI) of the spinal cord is able to provide maps of neuronal activity. Spinal fMRI data have been analyzed in previous studies by calculating the cross-correlation (CC) between the stimulus and the time course of every voxel and, more recently, by using the general linear model (GLM). The aim of this study was to compare three different approaches (CC analysis, GLM and independent component analysis (ICA)) for analyzing fMRI scans of the cervical spinal cord. We analyzed spinal fMRI data from healthy subjects during a proprioceptive and a tactile stimulation by using two model-based approaches, i.e., CC analysis between the stimulus shape and the time course of every voxel, and the GLM. Moreover, we applied independent component analysis, a model-free approach which decomposes the data in a set of source signals. All methods were able to detect cervical cord areas of activity corresponding to the expected regions of neuronal activations. Model-based approaches (CC and GLM) revealed similar patterns of activity. ICA could identify a component correlated to fMRI stimulation, although with a lower statistical threshold than model-based approaches, and many components, consistent across subjects, which are likely to be secondary to noise present in the data. Model-based approaches seem to be more robust for estimating task-related activity, whereas ICA seems to be useful for eliminating noise components from the data. Combined use of ICA and GLM might improve the reliability of spinal fMRI results. (orig.)

  20. Examining secular trends and seasonality in count data using dynamic generalized linear modelling: a new methodological approach illustrated with hospital discharge data on myocardial infarction

    DEFF Research Database (Denmark)

    Lundbye-Christensen, Søren; Dethlefsen, Claus; Gorst-Rasmussen, Anders;

    2009-01-01

    . Records were updated daily. A dynamic model with a seasonal pattern and an approximately linear trend was fitted to the data, and diagnostic plots indicated a good model fit. The analysis conducted with the dynamic model revealed peaks coinciding with above-average influenza A activity. On average...

  1. Sparse Linear Identifiable Multivariate Modeling

    DEFF Research Database (Denmark)

    Henao, Ricardo; Winther, Ole

    2011-01-01

    In this paper we consider sparse and identifiable linear latent variable (factor) and linear Bayesian network models for parsimonious analysis of multivariate data. We propose a computationally efficient method for joint parameter and model inference, and model comparison. It consists of a fully...... Bayesian hierarchy for sparse models using slab and spike priors (two-component δ-function and continuous mixtures), non-Gaussian latent factors and a stochastic search over the ordering of the variables. The framework, which we call SLIM (Sparse Linear Identifiable Multivariate modeling), is validated...... and bench-marked on artificial and real biological data sets. SLIM is closest in spirit to LiNGAM (Shimizu et al., 2006), but differs substantially in inference, Bayesian network structure learning and model comparison. Experimentally, SLIM performs equally well or better than LiNGAM with comparable...

  2. Decomposable log-linear models

    DEFF Research Database (Denmark)

    Eriksen, Poul Svante

    can be characterized by a structured set of conditional independencies between some variables given some other variables. We term the new model class decomposable log-linear models, which is illustrated to be a much richer class than decomposable graphical models.It covers a wide range of non...

  3. Generalized non-linear strength theory and transformed stress space

    Institute of Scientific and Technical Information of China (English)

    YAO Yangping; LU Dechun; ZHOU Annan; ZOU Bo

    2004-01-01

    Based on the test data of frictional materials and previous research achievements in this field, a generalized non-linear strength theory (GNST) is proposed. It describes non-linear strength properties on the π-plane and the meridian plane using a unified formula, and it includes almost all the present non-linear strength theories, which can be used in just one material. The shape of failure function of the GNST is a smooth curve between the SMP criterion and the Mises criterion on the π-plane, and an exponential curve on the meridian plane. Through the transformed stress space based on the GNST, the combination of the GNST and various constitutive models using p and q as stress parameters can be realized simply and rationally in three-dimensional stress state.

  4. Enhancing Classification Performance of Functional Near-Infrared Spectroscopy- Brain–Computer Interface Using Adaptive Estimation of General Linear Model Coefficients

    Directory of Open Access Journals (Sweden)

    Nauman Khalid Qureshi

    2017-07-01

    Full Text Available In this paper, a novel methodology for enhanced classification of functional near-infrared spectroscopy (fNIRS signals utilizable in a two-class [motor imagery (MI and rest; mental rotation (MR and rest] brain–computer interface (BCI is presented. First, fNIRS signals corresponding to MI and MR are acquired from the motor and prefrontal cortex, respectively, afterward, filtered to remove physiological noises. Then, the signals are modeled using the general linear model, the coefficients of which are adaptively estimated using the least squares technique. Subsequently, multiple feature combinations of estimated coefficients were used for classification. The best classification accuracies achieved for five subjects, for MI versus rest are 79.5, 83.7, 82.6, 81.4, and 84.1% whereas those for MR versus rest are 85.5, 85.2, 87.8, 83.7, and 84.8%, respectively, using support vector machine. These results are compared with the best classification accuracies obtained using the conventional hemodynamic response. By means of the proposed methodology, the average classification accuracy obtained was significantly higher (p < 0.05. These results serve to demonstrate the feasibility of developing a high-classification-performance fNIRS-BCI.

  5. Construction of extended exponential general linear methods 524 ...

    African Journals Online (AJOL)

    Construction of extended exponential general linear methods 524 for solving semi-linear problems. ... Journal Home > Vol 13, No 2 (2014) > ... This paper introduces a new approach for constructing higher order of EEGLM which have become ...

  6. Generalized Linear Models to Identify Key Hydromorphological and Chemical Variables Determining the Occurrence of Macroinvertebrates in the Guayas River Basin (Ecuador

    Directory of Open Access Journals (Sweden)

    Minar Naomi Damanik-Ambarita

    2016-07-01

    Full Text Available The biotic integrity of the Guayas River basin in Ecuador is at environmental risk due to extensive anthropogenic activities. We investigated the potential impacts of hydromorphological and chemical variables on biotic integrity using macroinvertebrate-based bioassessments. The bioassessment methods utilized included the Biological Monitoring Working Party adapted for Colombia (BMWP-Col and the average score per taxon (ASPT, via an extensive sampling campaign that was completed throughout the river basin at 120 sampling sites. The BMWP-Col classification ranged from very bad to good, and from probable severe pollution to clean water based on the ASPT scores. Generalized linear models (GLMs and sensitivity analysis were used to relate the bioassessment index to hydromorphological and chemical variables. It was found that elevation, nitrate-N, sediment angularity, logs, presence of macrophytes, flow velocity, turbidity, bank shape, land use and chlorophyll were the key environmental variables affecting the BMWP-Col. From the analyses, it was observed that the rivers at the upstream higher elevations of the river basin were in better condition compared to lowland systems and that a higher flow velocity was linked to a better BMWP-Col score. The nitrate concentrations were very low in the entire river basin and did not relate to a negative impact on the macroinvertebrate communities. Although the results of the models provided insights into the ecosystem, cross fold model development and validation also showed that there was a level of uncertainty in the outcomes. However, the results of the models and sensitivity analysis can support water management actions to determine and focus on alterable variables, such as the land use at different elevations, monitoring of nitrate and chlorophyll concentrations, macrophyte presence, sediment transport and bank stability.

  7. Polymorphic Uncertain Linear Programming for Generalized Production Planning Problems

    Directory of Open Access Journals (Sweden)

    Xinbo Zhang

    2014-01-01

    Full Text Available A polymorphic uncertain linear programming (PULP model is constructed to formulate a class of generalized production planning problems. In accordance with the practical environment, some factors such as the consumption of raw material, the limitation of resource and the demand of product are incorporated into the model as parameters of interval and fuzzy subsets, respectively. Based on the theory of fuzzy interval program and the modified possibility degree for the order of interval numbers, a deterministic equivalent formulation for this model is derived such that a robust solution for the uncertain optimization problem is obtained. Case study indicates that the constructed model and the proposed solution are useful to search for an optimal production plan for the polymorphic uncertain generalized production planning problems.

  8. Penalized maximum likelihood estimation for generalized linear point processes

    OpenAIRE

    2010-01-01

    A generalized linear point process is specified in terms of an intensity that depends upon a linear predictor process through a fixed non-linear function. We present a framework where the linear predictor is parametrized by a Banach space and give results on Gateaux differentiability of the log-likelihood. Of particular interest is when the intensity is expressed in terms of a linear filter parametrized by a Sobolev space. Using that the Sobolev spaces are reproducing kernel Hilbert spaces we...

  9. Abstract Acceleration of General Linear Loops

    OpenAIRE

    2014-01-01

    International audience; We present abstract acceleration techniques for computing loop invariants for numerical programs with linear assignments and conditionals. Whereas abstract interpretation techniques typically over-approximate the set of reachable states iteratively, abstract acceleration captures the effect of the loop with a single, non-iterative transfer function applied to the initial states at the loop head. In contrast to previous acceleration techniques, our approach applies to a...

  10. Generalized Ghost Dark Energy with Non-Linear Interaction

    CERN Document Server

    Ebrahimi, E; Mehrabi, A; Movahed, S M S

    2016-01-01

    In this paper we investigate ghost dark energy model in the presence of non-linear interaction between dark energy and dark matter. The functional form of dark energy density in the generalized ghost dark energy (GGDE) model is $\\rho_D\\equiv f(H, H^2)$ with coefficient of $H^2$ represented by $\\zeta$ and the model contains three free parameters as $\\Omega_D, \\zeta$ and $b^2$ (the coupling coefficient of interactions). We propose three kinds of non-linear interaction terms and discuss the behavior of equation of state, deceleration and dark energy density parameters of the model. We also find the squared sound speed and search for signs of stability of the model. To compare the interacting GGDE model with observational data sets, we use more recent observational outcomes, namely SNIa, gamma-ray bursts, baryonic acoustic oscillation and the most relevant CMB parameters including, the position of acoustic peaks, shift parameters and redshift to recombination. For GGDE with the first non-linear interaction, the j...

  11. Parameterized Linear Longitudinal Airship Model

    Science.gov (United States)

    Kulczycki, Eric; Elfes, Alberto; Bayard, David; Quadrelli, Marco; Johnson, Joseph

    2010-01-01

    A parameterized linear mathematical model of the longitudinal dynamics of an airship is undergoing development. This model is intended to be used in designing control systems for future airships that would operate in the atmospheres of Earth and remote planets. Heretofore, the development of linearized models of the longitudinal dynamics of airships has been costly in that it has been necessary to perform extensive flight testing and to use system-identification techniques to construct models that fit the flight-test data. The present model is a generic one that can be relatively easily specialized to approximate the dynamics of specific airships at specific operating points, without need for further system identification, and with significantly less flight testing. The approach taken in the present development is to merge the linearized dynamical equations of an airship with techniques for estimation of aircraft stability derivatives, and to thereby make it possible to construct a linearized dynamical model of the longitudinal dynamics of a specific airship from geometric and aerodynamic data pertaining to that airship. (It is also planned to develop a model of the lateral dynamics by use of the same methods.) All of the aerodynamic data needed to construct the model of a specific airship can be obtained from wind-tunnel testing and computational fluid dynamics

  12. Inequality constrained normal linear models

    NARCIS (Netherlands)

    Klugkist, I.G.

    2005-01-01

    This dissertation deals with normal linear models with inequality constraints among model parameters. It consists of an introduction and four chapters that are papers submitted for publication. The first chapter introduces the use of inequality constraints. Scientists often have one or more theories

  13. Relationship between neighbourhood socioeconomic position and neighbourhood public green space availability: An environmental inequality analysis in a large German city applying generalized linear models.

    Science.gov (United States)

    Schüle, Steffen Andreas; Gabriel, Katharina M A; Bolte, Gabriele

    2017-06-01

    The environmental justice framework states that besides environmental burdens also resources may be social unequally distributed both on the individual and on the neighbourhood level. This ecological study investigated whether neighbourhood socioeconomic position (SEP) was associated with neighbourhood public green space availability in a large German city with more than 1 million inhabitants. Two different measures were defined for green space availability. Firstly, percentage of green space within neighbourhoods was calculated with the additional consideration of various buffers around the boundaries. Secondly, percentage of green space was calculated based on various radii around the neighbourhood centroid. An index of neighbourhood SEP was calculated with principal component analysis. Log-gamma regression from the group of generalized linear models was applied in order to consider the non-normal distribution of the response variable. All models were adjusted for population density. Low neighbourhood SEP was associated with decreasing neighbourhood green space availability including 200m up to 1000m buffers around the neighbourhood boundaries. Low neighbourhood SEP was also associated with decreasing green space availability based on catchment areas measured from neighbourhood centroids with different radii (1000m up to 3000 m). With an increasing radius the strength of the associations decreased. Social unequally distributed green space may amplify environmental health inequalities in an urban context. Thus, the identification of vulnerable neighbourhoods and population groups plays an important role for epidemiological research and healthy city planning. As a methodical aspect, log-gamma regression offers an adequate parametric modelling strategy for positively distributed environmental variables. Copyright © 2017 Elsevier GmbH. All rights reserved.

  14. Extending the simple linear regression model to account for correlated responses: an introduction to generalized estimating equations and multi-level mixed modelling.

    Science.gov (United States)

    Burton, P; Gurrin, L; Sly, P

    1998-06-15

    Much of the research in epidemiology and clinical science is based upon longitudinal designs which involve repeated measurements of a variable of interest in each of a series of individuals. Such designs can be very powerful, both statistically and scientifically, because they enable one to study changes within individual subjects over time or under varied conditions. However, this power arises because the repeated measurements tend to be correlated with one another, and this must be taken into proper account at the time of analysis or misleading conclusions may result. Recent advances in statistical theory and in software development mean that studies based upon such designs can now be analysed more easily, in a valid yet flexible manner, using a variety of approaches which include the use of generalized estimating equations, and mixed models which incorporate random effects. This paper provides a particularly simple illustration of the use of these two approaches, taking as a practical example the analysis of a study which examined the response of portable peak expiratory flow meters to changes in true peak expiratory flow in 12 children with asthma. The paper takes the reader through the relevant practicalities of model fitting, interpretation and criticism and demonstrates that, in a simple case such as this, analyses based upon these model-based approaches produce reassuringly similar inferences to standard analyses based upon more conventional methods.

  15. Atlas-guided volumetric diffuse optical tomography enhanced by generalized linear model analysis to image risk decision-making responses in young adults.

    Science.gov (United States)

    Lin, Zi-Jing; Li, Lin; Cazzell, Mary; Liu, Hanli

    2014-08-01

    Diffuse optical tomography (DOT) is a variant of functional near infrared spectroscopy and has the capability of mapping or reconstructing three dimensional (3D) hemodynamic changes due to brain activity. Common methods used in DOT image analysis to define brain activation have limitations because the selection of activation period is relatively subjective. General linear model (GLM)-based analysis can overcome this limitation. In this study, we combine the atlas-guided 3D DOT image reconstruction with GLM-based analysis (i.e., voxel-wise GLM analysis) to investigate the brain activity that is associated with risk decision-making processes. Risk decision-making is an important cognitive process and thus is an essential topic in the field of neuroscience. The Balloon Analog Risk Task (BART) is a valid experimental model and has been commonly used to assess human risk-taking actions and tendencies while facing risks. We have used the BART paradigm with a blocked design to investigate brain activations in the prefrontal and frontal cortical areas during decision-making from 37 human participants (22 males and 15 females). Voxel-wise GLM analysis was performed after a human brain atlas template and a depth compensation algorithm were combined to form atlas-guided DOT images. In this work, we wish to demonstrate the excellence of using voxel-wise GLM analysis with DOT to image and study cognitive functions in response to risk decision-making. Results have shown significant hemodynamic changes in the dorsal lateral prefrontal cortex (DLPFC) during the active-choice mode and a different activation pattern between genders; these findings correlate well with published literature in functional magnetic resonance imaging (fMRI) and fNIRS studies.

  16. Estimation for the simple linear Boolean model

    OpenAIRE

    2006-01-01

    We consider the simple linear Boolean model, a fundamental coverage process also known as the Markov/General/infinity queue. In the model, line segments of independent and identically distributed length are located at the points of a Poisson process. The segments may overlap, resulting in a pattern of "clumps"-regions of the line that are covered by one or more segments-alternating with uncovered regions or "spacings". Study and application of the model have been impeded by the difficult...

  17. Generalized Nonlinear Yule Models

    Science.gov (United States)

    Lansky, Petr; Polito, Federico; Sacerdote, Laura

    2016-10-01

    With the aim of considering models related to random graphs growth exhibiting persistent memory, we propose a fractional nonlinear modification of the classical Yule model often studied in the context of macroevolution. Here the model is analyzed and interpreted in the framework of the development of networks such as the World Wide Web. Nonlinearity is introduced by replacing the linear birth process governing the growth of the in-links of each specific webpage with a fractional nonlinear birth process with completely general birth rates. Among the main results we derive the explicit distribution of the number of in-links of a webpage chosen uniformly at random recognizing the contribution to the asymptotics and the finite time correction. The mean value of the latter distribution is also calculated explicitly in the most general case. Furthermore, in order to show the usefulness of our results, we particularize them in the case of specific birth rates giving rise to a saturating behaviour, a property that is often observed in nature. The further specialization to the non-fractional case allows us to extend the Yule model accounting for a nonlinear growth.

  18. Generalized Nonlinear Yule Models

    Science.gov (United States)

    Lansky, Petr; Polito, Federico; Sacerdote, Laura

    2016-11-01

    With the aim of considering models related to random graphs growth exhibiting persistent memory, we propose a fractional nonlinear modification of the classical Yule model often studied in the context of macroevolution. Here the model is analyzed and interpreted in the framework of the development of networks such as the World Wide Web. Nonlinearity is introduced by replacing the linear birth process governing the growth of the in-links of each specific webpage with a fractional nonlinear birth process with completely general birth rates. Among the main results we derive the explicit distribution of the number of in-links of a webpage chosen uniformly at random recognizing the contribution to the asymptotics and the finite time correction. The mean value of the latter distribution is also calculated explicitly in the most general case. Furthermore, in order to show the usefulness of our results, we particularize them in the case of specific birth rates giving rise to a saturating behaviour, a property that is often observed in nature. The further specialization to the non-fractional case allows us to extend the Yule model accounting for a nonlinear growth.

  19. Multivariate Generalized Linear Mixed Models with High Complexity / Modèles linéaires généralisés mixtes multivariés avec complexité élevée

    DEFF Research Database (Denmark)

    Labouriau, Rodrigo

    The theory of exponential dispersion models (EDM), for which Bent Jørgensen made substantial contributions, provides a flexible framework of models alternative to the classic Gaussian linear models (e.g. generalized linear models and additive models). I review some multivariate extensions of thos...... aux EDMs pour bien représenter et interpréter les questions biologiques d'intérêt. Bent Jørgensen prônait des idées similaires dans son travail depuis les années 1980....

  20. Generalized Ultrametric Semilattices of Linear Signals

    Science.gov (United States)

    2014-01-23

    ultrametric semilattice with a totally ordered distance set is isomorphic to a space of that kind. It follows that the formal definition of...from the National Science Foundation (NSF awards \\#0720882 ( CSR -EHS: PRET), \\#0931843 (CPS: Large: ActionWebs), and \\#1035672 (CPS: Medium: Timing...distance set is isomorphic to a space of that kind. It follows that the formal definition of generalized ultrametric semilattices with totally ordered

  1. QUADRATIC INVARIANTS AND SYMPLECTIC STRUCTURE OF GENERAL LINEAR METHODS

    Institute of Scientific and Technical Information of China (English)

    Ai-guo Xiao; Shou-fu Li; Min Yang

    2001-01-01

    In this paper, we present some invariants and conservation laws of general linear methods applied to differential equation systems. We show that the quadratic invariants and symplecticity of the systems can be extended to general linear methods by a tensor product, and show that general linear methods with the matrix M=0 inherit in an extended sense the quadratic invariants possessed by the differential equation systems being integrated and preserve in an extended sense the symplectic structure of the phase space in the integration of Hamiltonian systems. These unify and extend existing relevant results on Runge-Kutta methods, linear multistep methods and one-leg methods. Finally, as special cases of general linear methods, we examine multistep Runge-Kutta methods, one-leg methods and linear two-step methods in detail.

  2. Generalized Multicarrier CDMA: Unification and Linear Equalization

    Directory of Open Access Journals (Sweden)

    Wang Zhengdao

    2005-01-01

    Full Text Available Relying on block-symbol spreading and judicious design of user codes, this paper builds on the generalized multicarrier (GMC quasisynchronous CDMA system that is capable of multiuser interference (MUI elimination and intersymbol interference (ISI suppression with guaranteed symbol recovery, regardless of the wireless frequency-selective channels. GMC-CDMA affords an all-digital unifying framework, which encompasses single-carrier and several multicarrier (MC CDMA systems. Besides the unifying framework, it is shown that GMC-CDMA offers flexibility both in full load (maximum number of users allowed by the available bandwidth and in reduced load settings. A novel blind channel estimation algorithm is also derived. Analytical evaluation and simulations illustrate the superior error performance and flexibility of uncoded GMC-CDMA over competing MC-CDMA alternatives especially in the presence of uplink multipath channels.

  3. Linear Programming Problems for Generalized Uncertainty

    Science.gov (United States)

    Thipwiwatpotjana, Phantipa

    2010-01-01

    Uncertainty occurs when there is more than one realization that can represent an information. This dissertation concerns merely discrete realizations of an uncertainty. Different interpretations of an uncertainty and their relationships are addressed when the uncertainty is not a probability of each realization. A well known model that can handle…

  4. Linearized Bekenstein Varying Alpha Models

    CERN Document Server

    Pina-Avelino, P; Oliveira, J C

    2004-01-01

    We study the simplest class of Bekenstein-type, varying $\\alpha$ models, in which the two available free functions (potential and gauge kinetic function) are Taylor-expanded up to linear order. Any realistic model of this type reduces to a model in this class for a certain time interval around the present day. Nevertheless, we show that no such model is consistent with all existing observational results. We discuss possible implications of these findings, and in particular clarify the ambiguous statement (often found in the literature) that ``the Webb results are inconsistent with Oklo''.

  5. Linearized Bekenstein varying α models

    Science.gov (United States)

    Avelino, P. P.; Martins, C. J.; Oliveira, J. C.

    2004-10-01

    We study the simplest class of Bekenstein-type, varying α models, in which the two available free functions (potential and gauge kinetic function) are Taylor-expanded up to linear order. Any realistic model of this type reduces to a model in this class for a certain time interval around the present day. Nevertheless, we show that no such model is consistent with all existing observational results. We discuss possible implications of these findings, and, in particular, clarify the ambiguous statement (often found in the literature) that “the Webb results are inconsistent with Oklo.”

  6. Modelling female fertility traits in beef cattle using linear and non-linear models.

    Science.gov (United States)

    Naya, H; Peñagaricano, F; Urioste, J I

    2017-06-01

    Female fertility traits are key components of the profitability of beef cattle production. However, these traits are difficult and expensive to measure, particularly under extensive pastoral conditions, and consequently, fertility records are in general scarce and somehow incomplete. Moreover, fertility traits are usually dominated by the effects of herd-year environment, and it is generally assumed that relatively small margins are kept for genetic improvement. New ways of modelling genetic variation in these traits are needed. Inspired in the methodological developments made by Prof. Daniel Gianola and co-workers, we assayed linear (Gaussian), Poisson, probit (threshold), censored Poisson and censored Gaussian models to three different kinds of endpoints, namely calving success (CS), number of days from first calving (CD) and number of failed oestrus (FE). For models involving FE and CS, non-linear models overperformed their linear counterparts. For models derived from CD, linear versions displayed better adjustment than the non-linear counterparts. Non-linear models showed consistently higher estimates of heritability and repeatability in all cases (h(2 )  0.23 and r > 0.24, for non-linear models). While additive and permanent environment effects showed highly favourable correlations between all models (>0.789), consistency in selecting the 10% best sires showed important differences, mainly amongst the considered endpoints (FE, CS and CD). In consequence, endpoints should be considered as modelling different underlying genetic effects, with linear models more appropriate to describe CD and non-linear models better for FE and CS. © 2017 Blackwell Verlag GmbH.

  7. Multicollinearity in hierarchical linear models.

    Science.gov (United States)

    Yu, Han; Jiang, Shanhe; Land, Kenneth C

    2015-09-01

    This study investigates an ill-posed problem (multicollinearity) in Hierarchical Linear Models from both the data and the model perspectives. We propose an intuitive, effective approach to diagnosing the presence of multicollinearity and its remedies in this class of models. A simulation study demonstrates the impacts of multicollinearity on coefficient estimates, associated standard errors, and variance components at various levels of multicollinearity for finite sample sizes typical in social science studies. We further investigate the role multicollinearity plays at each level for estimation of coefficient parameters in terms of shrinkage. Based on these analyses, we recommend a top-down method for assessing multicollinearity in HLMs that first examines the contextual predictors (Level-2 in a two-level model) and then the individual predictors (Level-1) and uses the results for data collection, research problem redefinition, model re-specification, variable selection and estimation of a final model.

  8. Generalized Poisson sigma models

    CERN Document Server

    Batalin, I; Batalin, Igor; Marnelius, Robert

    2001-01-01

    A general master action in terms of superfields is given which generates generalized Poisson sigma models by means of a natural ghost number prescription. The simplest representation is the sigma model considered by Cattaneo and Felder. For Dirac brackets considerably more general models are generated.

  9. Modelling Loudspeaker Non-Linearities

    DEFF Research Database (Denmark)

    Agerkvist, Finn T.

    2007-01-01

    This paper investigates different techniques for modelling the non-linear parameters of the electrodynamic loudspeaker. The methods are tested not only for their accuracy within the range of original data, but also for the ability to work reasonable outside that range, and it is demonstrated...... that polynomial expansions are rather poor at this, whereas an inverse polynomial expansion or localized fitting functions such as the gaussian are better suited for modelling the Bl-factor and compliance. For the inductance the sigmoid function is shown to give very good results. Finally the time varying...

  10. Natural connections given by general linear and classical connections

    OpenAIRE

    Janyška, Josef

    2004-01-01

    We assume a vector bundle $p: E\\to M$ with a general linear connection $K$ and a classical linear connection $\\Lam$ on $M$. We prove that all classical linear connections on the total space $E$ naturally given by $(\\Lam, K)$ form a 15-parameter family. Further we prove that all connections on $J^1 E$ naturally given by $(\\Lam, K)$ form a 14-parameter family. Both families of connections are described geometrically.

  11. A New Method for Solving General Dual Fuzzy Linear Systems

    Directory of Open Access Journals (Sweden)

    M. Otadi

    2013-09-01

    Full Text Available . According to fuzzy arithmetic, general dual fuzzy linear system (GDFLS cannot be replaced by a fuzzy linear system (FLS. In this paper, we use new notation of fuzzy numbers and convert a GDFLS to two linear systems in crisp case, then we discuss complexity of the proposed method. Conditions for the existence of a unique fuzzy solution to n × n GDFLS are derived

  12. Minimal solution of general dual fuzzy linear systems

    Energy Technology Data Exchange (ETDEWEB)

    Abbasbandy, S. [Department of Mathematics, Science and Research Branch, Islamic Azad University, Tehran 14778 (Iran, Islamic Republic of); Department of Mathematics, Faculty of Science, Imam Khomeini International University, Qazvin 34194-288 (Iran, Islamic Republic of)], E-mail: abbasbandy@yahoo.com; Otadi, M.; Mosleh, M. [Department of Mathematics, Science and Research Branch, Islamic Azad University, Tehran 14778 (Iran, Islamic Republic of); Department of Mathematics, Islamic Azad University, Firuozkooh Branch, Firuozkooh (Iran, Islamic Republic of)

    2008-08-15

    Fuzzy linear systems of equations, play a major role in several applications in various area such as engineering, physics and economics. In this paper, we investigate the existence of a minimal solution of general dual fuzzy linear equation systems. Two necessary and sufficient conditions for the minimal solution existence are given. Also, some examples in engineering and economic are considered.

  13. Neural Generalized Predictive Control of a non-linear Process

    DEFF Research Database (Denmark)

    Sørensen, Paul Haase; Nørgård, Peter Magnus; Ravn, Ole

    1998-01-01

    qualities. The controller is a non-linear version of the well-known generalized predictive controller developed in linear control theory. It involves minimization of a cost function which in the present case has to be done numerically. Therefore, we develop the numerical algorithms necessary in substantial...

  14. Linear generalized synchronization of continuous-time chaotic systems

    Energy Technology Data Exchange (ETDEWEB)

    Lu Junguo E-mail: jglu@sjtu.edu.cn; Xi Yugeng

    2003-08-01

    This paper develops a general approach for constructing a response system to implement linear generalized synchronization (GS) with the drive continuous-time chaotic system. Some sufficient conditions of global asymptotic linear GS between the drive and response continuous-time chaotic systems are attained from rigorously modern control theory. Finally, we take Chua's circuit as an example for illustration and verification.

  15. Decomposed Implicit Models of Piecewise - Linear Networks

    Directory of Open Access Journals (Sweden)

    J. Brzobohaty

    1992-05-01

    Full Text Available The general matrix form of the implicit description of a piecewise-linear (PWL network and the symbolic block diagram of the corresponding circuit model are proposed. Their decomposed forms enable us to determine quite separately the existence of the individual breakpoints of the resultant PWL characteristic and their coordinates using independent network parameters. For the two-diode and three-diode cases all the attainable types of the PWL characteristic are introduced.

  16. Extending generalized linear models with random effects and components of dispersion = [Gegeneraliseerde lineaire modellen met extra stochastische termen en bijbehorende variantiecomponenten

    NARCIS (Netherlands)

    Engel, B.

    1997-01-01


    This dissertation was born out of a need for general and numerically feasible procedures for inference in variance components models for non-normal data. The methodology should be widely applicable within the institutes of the Agricultural Research Department (DLO) of the Dutch Ministry o

  17. Matrix algebra for linear models

    CERN Document Server

    Gruber, Marvin H J

    2013-01-01

    Matrix methods have evolved from a tool for expressing statistical problems to an indispensable part of the development, understanding, and use of various types of complex statistical analyses. This evolution has made matrix methods a vital part of statistical education. Traditionally, matrix methods are taught in courses on everything from regression analysis to stochastic processes, thus creating a fractured view of the topic. Matrix Algebra for Linear Models offers readers a unique, unified view of matrix analysis theory (where and when necessary), methods, and their applications. Written f

  18. Noether's theory of generalized linear nonholonomic mechanical systems

    Institute of Scientific and Technical Information of China (English)

    Dong Wen-Shan; Huang Bao-Xin; Fang Jian-Hui

    2011-01-01

    By introducing the quasi-symmetry of the infinitesimal transformation of the transformation group Gr, the Noether's theorem and the Noether's inverse theorem for generalized linear nonholonomic mechanical systems are obtained in a generalized compound derivative space. An example is given to illustrate the application of the result.

  19. Controllability of Linear Systems on Generalized Heisenberg Groups

    OpenAIRE

    Dath, Mouhamadou; Jouan, Philippe

    2015-01-01

    This paper is devoted to the study of controllability of linear systems on generalized Heisenberg groups. Some general necessary controllability conditions and some sufficient ones are provided. We introduce the notion of decoupled systems, and more precise controllability criteria are stated for them.

  20. Invertible Linear Maps on the General Linear Lie Algebras Preserving Solvability

    Institute of Scientific and Technical Information of China (English)

    CHEN ZHENG-XIN; CHEN QIONG

    2012-01-01

    Let Mn be the algebra of all n × n complex matrices and gl(n,C) be the general linear Lie algebra,where n ≥ 2.An invertible linear map ?:gl(n,C) →gl(n,C) preserves solvability in both directions if both ? and ?-1 map every solvable Lie subalgebra of gl(n,C) to some solvable Lie subalgebra.In this paper we classify the invertible linear maps preserving solvability on gl(n,C) in both directions.As a sequence,such maps coincide with the invertible linear maps preserving commutativity on Mn in both directions.

  1. Improved testing inference in mixed linear models

    CERN Document Server

    Melo, Tatiane F N; Cribari-Neto, Francisco; 10.1016/j.csda.2008.12.007

    2011-01-01

    Mixed linear models are commonly used in repeated measures studies. They account for the dependence amongst observations obtained from the same experimental unit. Oftentimes, the number of observations is small, and it is thus important to use inference strategies that incorporate small sample corrections. In this paper, we develop modified versions of the likelihood ratio test for fixed effects inference in mixed linear models. In particular, we derive a Bartlett correction to such a test and also to a test obtained from a modified profile likelihood function. Our results generalize those in Zucker et al. (Journal of the Royal Statistical Society B, 2000, 62, 827-838) by allowing the parameter of interest to be vector-valued. Additionally, our Bartlett corrections allow for random effects nonlinear covariance matrix structure. We report numerical evidence which shows that the proposed tests display superior finite sample behavior relative to the standard likelihood ratio test. An application is also presente...

  2. General theory for multiple input-output perturbations in complex molecular systems. 1. Linear QSPR electronegativity models in physical, organic, and medicinal chemistry.

    Science.gov (United States)

    González-Díaz, Humberto; Arrasate, Sonia; Gómez-SanJuan, Asier; Sotomayor, Nuria; Lete, Esther; Besada-Porto, Lina; Ruso, Juan M

    2013-01-01

    In general perturbation methods starts with a known exact solution of a problem and add "small" variation terms in order to approach to a solution for a related problem without known exact solution. Perturbation theory has been widely used in almost all areas of science. Bhor's quantum model, Heisenberg's matrix mechanincs, Feyman diagrams, and Poincare's chaos model or "butterfly effect" in complex systems are examples of perturbation theories. On the other hand, the study of Quantitative Structure-Property Relationships (QSPR) in molecular complex systems is an ideal area for the application of perturbation theory. There are several problems with exact experimental solutions (new chemical reactions, physicochemical properties, drug activity and distribution, metabolic networks, etc.) in public databases like CHEMBL. However, in all these cases, we have an even larger list of related problems without known solutions. We need to know the change in all these properties after a perturbation of initial boundary conditions. It means, when we test large sets of similar, but different, compounds and/or chemical reactions under the slightly different conditions (temperature, time, solvents, enzymes, assays, protein targets, tissues, partition systems, organisms, etc.). However, to the best of our knowledge, there is no QSPR general-purpose perturbation theory to solve this problem. In this work, firstly we review general aspects and applications of both perturbation theory and QSPR models. Secondly, we formulate a general-purpose perturbation theory for multiple-boundary QSPR problems. Last, we develop three new QSPR-Perturbation theory models. The first model classify correctly >100,000 pairs of intra-molecular carbolithiations with 75-95% of Accuracy (Ac), Sensitivity (Sn), and Specificity (Sp). The model predicts probabilities of variations in the yield and enantiomeric excess of reactions due to at least one perturbation in boundary conditions (solvent, temperature

  3. A Matrix Approach for General Higher Order Linear Recurrences

    Science.gov (United States)

    2011-01-01

    properties of linear recurrences (such as the well-known Fibonacci and Pell sequences ). In [2], Er defined k linear recurring sequences of order at...the nth term of the ith generalized order-k Fibonacci sequence . Communicated by Lee See Keong. Received: March 26, 2009; Revised: August 28, 2009...6], the author gave the generalized order-k Fibonacci and Pell (F-P) sequence as follows: For m ≥ 0, n > 0 and 1 ≤ i ≤ k uin = 2 muin−1 + u i n−2

  4. Linear generalized synchronization of chaotic systems with uncertain parameters

    Institute of Scientific and Technical Information of China (English)

    Jia Zhen

    2008-01-01

    A more general form of projective synchronization,so called linear generalized synchronization(LGS)is proposed,which includes the generalized projective synchronization(GPS)and the hybrid projective synchronization(HPS)as its special cases.Based on the adaptive technique and Lyapunov stability theory,a general method for achieving the LGS between two chaotic or hyperchaotic systems with uncertain parameters in any scaling matrix is presented.Some numerical simulations are provided to show the effectiveness and feasibility of the proposed synchronization method.

  5. Linear mixed models in sensometrics

    DEFF Research Database (Denmark)

    Kuznetsova, Alexandra

    quality of decision making in Danish as well as international food companies and other companies using the same methods. The two open-source R packages lmerTest and SensMixed implement and support the methodological developments in the research papers as well as the ANOVA modelling part of the Consumer......Today’s companies and researchers gather large amounts of data of different kind. In consumer studies the objective is the collection of the data to better understand consumer acceptance of products. In such studies a number of persons (generally not trained) are selected in order to score products......, texture, sound - depending on the aim of a study. It is a common approach in both studies to consider persons coming from a larger population, which, from the statistical perspective, leads to the use of mixed effects models, where consumers/assessors enter as random effects (Lawless and Heymann, 1997...

  6. Generalized latent variable modeling multilevel, longitudinal, and structural equation models

    CERN Document Server

    Skrondal, Anders

    2004-01-01

    METHODOLOGY THE OMNI-PRESENCE OF LATENT VARIABLES Introduction 'True' variable measured with error Hypothetical constructs Unobserved heterogeneity Missing values and counterfactuals Latent responses Generating flexible distributions Combining information Summary MODELING DIFFERENT RESPONSE PROCESSES Introduction Generalized linear models Extensions of generalized linear models Latent response formulation Modeling durations or survival Summary and further reading CLASSICAL LATENT VARIABLE MODELS Introduction Multilevel regression models Factor models and item respons

  7. Linear and non-linear perturbations in dark energy models

    CERN Document Server

    Escamilla-Rivera, Celia; Fabris, Julio C; Alcaniz, Jailson S

    2016-01-01

    In this work we discuss observational aspects of three time-dependent parameterisations of the dark energy equation of state $w(z)$. In order to determine the dynamics associated with these models, we calculate their background evolution and perturbations in a scalar field representation. After performing a complete treatment of linear perturbations, we also show that the non-linear contribution of the selected $w(z)$ parameterisations to the matter power spectra is almost the same for all scales, with no significant difference from the predictions of the standard $\\Lambda$CDM model.

  8. PYESSENCE: Generalized Coupled Quintessence Linear Perturbation Python Code

    Science.gov (United States)

    Leithes, Alexander

    2016-09-01

    PYESSENCE evolves linearly perturbed coupled quintessence models with multiple (cold dark matter) CDM fluid species and multiple DE (dark energy) scalar fields, and can be used to generate quantities such as the growth factor of large scale structure for any coupled quintessence model with an arbitrary number of fields and fluids and arbitrary couplings.

  9. Linear latent variable models: the lava-package

    DEFF Research Database (Denmark)

    Holst, Klaus Kähler; Budtz-Jørgensen, Esben

    2013-01-01

    An R package for specifying and estimating linear latent variable models is presented. The philosophy of the implementation is to separate the model specification from the actual data, which leads to a dynamic and easy way of modeling complex hierarchical structures. Several advanced features are...... interface covering a broad range of non-linear generalized structural equation models is described. The model and software are demonstrated in data of measurements of the serotonin transporter in the human brain....

  10. A new heuristic algorithm for general integer linear programming problems

    Institute of Scientific and Technical Information of China (English)

    GAO Pei-wang; CAI Ying

    2006-01-01

    A new heuristic algorithm is proposed for solving general integer linear programming problems.In the algorithm,the objective function hyperplane is used as a cutting plane,and then by introducing a special set of assistant sets,an efficient heuristic search for the solution to the integer linear program is carried out in the sets on the objective function hyperplane.A simple numerical example shows that the algorithm is efficient for some problems,and therefore,of practical interest.

  11. Stochastic linear programming models, theory, and computation

    CERN Document Server

    Kall, Peter

    2011-01-01

    This new edition of Stochastic Linear Programming: Models, Theory and Computation has been brought completely up to date, either dealing with or at least referring to new material on models and methods, including DEA with stochastic outputs modeled via constraints on special risk functions (generalizing chance constraints, ICC’s and CVaR constraints), material on Sharpe-ratio, and Asset Liability Management models involving CVaR in a multi-stage setup. To facilitate use as a text, exercises are included throughout the book, and web access is provided to a student version of the authors’ SLP-IOR software. Additionally, the authors have updated the Guide to Available Software, and they have included newer algorithms and modeling systems for SLP. The book is thus suitable as a text for advanced courses in stochastic optimization, and as a reference to the field. From Reviews of the First Edition: "The book presents a comprehensive study of stochastic linear optimization problems and their applications. … T...

  12. Computation of Optimal Monotonicity Preserving General Linear Methods

    KAUST Repository

    Ketcheson, David I.

    2009-07-01

    Monotonicity preserving numerical methods for ordinary differential equations prevent the growth of propagated errors and preserve convex boundedness properties of the solution. We formulate the problem of finding optimal monotonicity preserving general linear methods for linear autonomous equations, and propose an efficient algorithm for its solution. This algorithm reliably finds optimal methods even among classes involving very high order accuracy and that use many steps and/or stages. The optimality of some recently proposed methods is verified, and many more efficient methods are found. We use similar algorithms to find optimal strong stability preserving linear multistep methods of both explicit and implicit type, including methods for hyperbolic PDEs that use downwind-biased operators.

  13. Processing Approach of Non-linear Adjustment Models in the Space of Non-linear Models

    Institute of Scientific and Technical Information of China (English)

    LI Chaokui; ZHU Qing; SONG Chengfang

    2003-01-01

    This paper investigates the mathematic features of non-linear models and discusses the processing way of non-linear factors which contributes to the non-linearity of a nonlinear model. On the basis of the error definition, this paper puts forward a new adjustment criterion, SGPE.Last, this paper investigates the solution of a non-linear regression model in the non-linear model space and makes the comparison between the estimated values in non-linear model space and those in linear model space.

  14. Parametrizing linear generalized Langevin dynamics from explicit molecular dynamics simulations

    CERN Document Server

    Gottwald, Fabian; Ivanov, Sergei D; Kühn, Oliver

    2015-01-01

    Fundamental understanding of complex dynamics in many-particle systems on the atomistic level is of utmost importance. Often the systems of interest are of macroscopic size but can be partitioned into few important degrees of freedom which are treated most accurately and others which constitute a thermal bath. Particular attention in this respect attracts the linear generalized Langevin equation (GLE), which can be rigorously derived by means of a linear projection (LP) technique. Within this framework a complicated interaction with the bath can be reduced to a single memory kernel. This memory kernel in turn is parametrized for a particular system studied, usually by means of time-domain methods based on explicit molecular dynamics data. Here we discuss that this task is most naturally achieved in frequency domain and develop a Fourier-based parametrization method that outperforms its time-domain analogues. Very surprisingly, the widely used rigid bond method turns out to be inappropriate in general. Importa...

  15. A general theory of linear cosmological perturbations: bimetric theories

    CERN Document Server

    Lagos, Macarena

    2016-01-01

    We implement the method developed in [1] to construct the most general parametrised action for linear cosmological perturbations of bimetric theories of gravity. Specifically, we consider perturbations around a homogeneous and isotropic background, and identify the complete form of the action invariant under diffeomorphism transformations, as well as the number of free parameters characterising this cosmological class of theories. We discuss, in detail, the case without derivative interactions, and compare our results with those found in massive bigravity.

  16. Error Control of Iterative Linear Solvers for Integrated Groundwater Models

    CERN Document Server

    Dixon, Matthew; Brush, Charles; Chung, Francis; Dogrul, Emin; Kadir, Tariq

    2010-01-01

    An open problem that arises when using modern iterative linear solvers, such as the preconditioned conjugate gradient (PCG) method or Generalized Minimum RESidual method (GMRES) is how to choose the residual tolerance in the linear solver to be consistent with the tolerance on the solution error. This problem is especially acute for integrated groundwater models which are implicitly coupled to another model, such as surface water models, and resolve both multiple scales of flow and temporal interaction terms, giving rise to linear systems with variable scaling. This article uses the theory of 'forward error bound estimation' to show how rescaling the linear system affects the correspondence between the residual error in the preconditioned linear system and the solution error. Using examples of linear systems from models developed using the USGS GSFLOW package and the California State Department of Water Resources' Integrated Water Flow Model (IWFM), we observe that this error bound guides the choice of a prac...

  17. Generalized simplicial chiral models

    CERN Document Server

    Alimohammadi, M

    2000-01-01

    Using the auxiliary field representation of the simplicial chiral models on a (d-1)-dimensional simplex, we generalize the simplicial chiral models by replacing the term Tr$(AA^{\\d})$ in the Lagrangian of these models, by an arbitrary class function of $AA^{\\d}; V(AA^{\\d})$. This is the same method that has been used in defining the generalized two-dimensional Yang-Mills theories (gYM_2) from ordinary YM_2. We call these models, the " generalized simplicial chiral models ". With the help of the results of one-link integral over a U(N) matrix, we compute the large-N saddle-point equations for eigenvalue density function $\\ro (z)$ in the weak ($\\b >\\b_c$) and strong ($\\b <\\b_c$) regions. In d=2, where the model somehow relates to gYM_2 theory, we solve the saddle-point equations and find $\\ro (z)$ in two region, and calculate the explicit value of critical point $\\b_c$ for $V(B)=TrB^n (B=AA^{\\d})$. For $V(B)=Tr B^2,Tr B^3$ and Tr$B^4$, we study the critical behaviour of the model at d=2, and by calculating t...

  18. Comparing linear probability model coefficients across groups

    DEFF Research Database (Denmark)

    Holm, Anders; Ejrnæs, Mette; Karlson, Kristian Bernt

    2015-01-01

    This article offers a formal identification analysis of the problem in comparing coefficients from linear probability models between groups. We show that differences in coefficients from these models can result not only from genuine differences in effects, but also from differences in one or more...... these limitations, and we suggest a restricted approach to using linear probability model coefficients in group comparisons....

  19. Composite Linear Models | Division of Cancer Prevention

    Science.gov (United States)

    By Stuart G. Baker The composite linear models software is a matrix approach to compute maximum likelihood estimates and asymptotic standard errors for models for incomplete multinomial data. It implements the method described in Baker SG. Composite linear models for incomplete multinomial data. Statistics in Medicine 1994;13:609-622. The software includes a library of thirty examples from the literature. |

  20. Bayes linear covariance matrix adjustment for multivariate dynamic linear models

    CERN Document Server

    Wilkinson, Darren J

    2008-01-01

    A methodology is developed for the adjustment of the covariance matrices underlying a multivariate constant time series dynamic linear model. The covariance matrices are embedded in a distribution-free inner-product space of matrix objects which facilitates such adjustment. This approach helps to make the analysis simple, tractable and robust. To illustrate the methods, a simple model is developed for a time series representing sales of certain brands of a product from a cash-and-carry depot. The covariance structure underlying the model is revised, and the benefits of this revision on first order inferences are then examined.

  1. Linear and Nonlinear Thinking: A Multidimensional Model and Measure

    Science.gov (United States)

    Groves, Kevin S.; Vance, Charles M.

    2015-01-01

    Building upon previously developed and more general dual-process models, this paper provides empirical support for a multidimensional thinking style construct comprised of linear thinking and multiple dimensions of nonlinear thinking. A self-report assessment instrument (Linear/Nonlinear Thinking Style Profile; LNTSP) is presented and…

  2. Linear and Nonlinear Thinking: A Multidimensional Model and Measure

    Science.gov (United States)

    Groves, Kevin S.; Vance, Charles M.

    2015-01-01

    Building upon previously developed and more general dual-process models, this paper provides empirical support for a multidimensional thinking style construct comprised of linear thinking and multiple dimensions of nonlinear thinking. A self-report assessment instrument (Linear/Nonlinear Thinking Style Profile; LNTSP) is presented and…

  3. Defining a Family of Cognitive Diagnosis Models Using Log-Linear Models with Latent Variables

    Science.gov (United States)

    Henson, Robert A.; Templin, Jonathan L.; Willse, John T.

    2009-01-01

    This paper uses log-linear models with latent variables (Hagenaars, in "Loglinear Models with Latent Variables," 1993) to define a family of cognitive diagnosis models. In doing so, the relationship between many common models is explicitly defined and discussed. In addition, because the log-linear model with latent variables is a general model for…

  4. 带有不完全信息的随机截尾广义线性模型的中偏差%Moderate Deviation of Generalized Linear Model Randomly Censored with Incomplete Information

    Institute of Scientific and Technical Information of China (English)

    肖枝洪; 李改扬; 李开丁

    2008-01-01

    本文介绍了随机截尾的带有不完全信息的广义线性模型,并在一定条件下运用Taylor渐近展开方法得到了此模型的极大似然估计的中偏差.%In this paper,we obtain some moderate deviation results of the maximum likelihood estimator for the generalized linear model (GLM) based on the observed data with incomplete information in the case of random censorship under certain regular conditions by Taylor asymptotic expansion.

  5. Sieve MLE for Generalized Partial Linear Models with Type Ⅱ Interval-censored Data%Ⅱ型区间删失数据下广义部分线性模型的筛极大似然估计

    Institute of Scientific and Technical Information of China (English)

    王晓光; 宋立新

    2008-01-01

    This article concerded with a semiparametric generalized partial linear model (GPLM) with the type Ⅱ censored data. A sieve maximum likelihood estimator (MLE) is proposed to estimate the parameter component, allowing exploration of the nonlinear relationship between a certain covariate and the response function.Asymptotic properties of the proposed sieve MLEs are discussed. Under some mild conditions, the estimators are shown to be strongly consistent. Moreover, the estimators of the unknown parameters are asymptotically normal and efficient, and the estimator of the nonparametric function has an optimal convergence rate.

  6. Comparative Study of Algorithms for Automated Generalization of Linear Objects

    Science.gov (United States)

    Azimjon, S.; Gupta, P. K.; Sukhmani, R. S. G. S.

    2014-11-01

    Automated generalization, rooted from conventional cartography, has become an increasing concern in both geographic information system (GIS) and mapping fields. All geographic phenomenon and the processes are bound to the scale, as it is impossible for human being to observe the Earth and the processes in it without decreasing its scale. To get optimal results, cartographers and map-making agencies develop set of rules and constraints, however these rules are under consideration and topic for many researches up until recent days. Reducing map generating time and giving objectivity is possible by developing automated map generalization algorithms (McMaster and Shea, 1988). Modification of the scale traditionally is a manual process, which requires knowledge of the expert cartographer, and it depends on the experience of the user, which makes the process very subjective as every user may generate different map with same requirements. However, automating generalization based on the cartographic rules and constrains can give consistent result. Also, developing automated system for map generation is the demand of this rapid changing world. The research that we have conveyed considers only generalization of the roads, as it is one of the indispensable parts of a map. Dehradun city, Uttarakhand state of India was selected as a study area. The study carried out comparative study of the generalization software sets, operations and algorithms available currently, also considers advantages and drawbacks of the existing software used worldwide. Research concludes with the development of road network generalization tool and with the final generalized road map of the study area, which explores the use of open source python programming language and attempts to compare different road network generalization algorithms. Thus, the paper discusses the alternative solutions for automated generalization of linear objects using GIS-technologies. Research made on automated of road network

  7. Generalized PID observer design for descriptor linear systems.

    Science.gov (United States)

    Wu, Ai-Guo; Duan, Guang-Ren; Fu, Yan-Ming

    2007-10-01

    A type of generalized proportional-integral-derivative observers is proposed for descriptor linear systems. Based on a general parametric solution to a type of generalized Sylvester matrix equations, a parametric design approach for such observers is established. The proposed approach provides parameterizations for all the observer gain matrices, gives the parametric expression for the corresponding left eigenvector matrix of the observer system matrix, realizes the elimination of impulsive behaviors, and guarantees the regularity of the observer system. The design method can offer all the degrees of design freedom, which can be utilized to achieve various desired system specifications and performances. In addition, a numerical example is employed to show the design procedure and illustrate the effect of the presented approach.

  8. Parametrizing linear generalized Langevin dynamics from explicit molecular dynamics simulations

    Science.gov (United States)

    Gottwald, Fabian; Karsten, Sven; Ivanov, Sergei D.; Kühn, Oliver

    2015-06-01

    Fundamental understanding of complex dynamics in many-particle systems on the atomistic level is of utmost importance. Often the systems of interest are of macroscopic size but can be partitioned into a few important degrees of freedom which are treated most accurately and others which constitute a thermal bath. Particular attention in this respect attracts the linear generalized Langevin equation, which can be rigorously derived by means of a linear projection technique. Within this framework, a complicated interaction with the bath can be reduced to a single memory kernel. This memory kernel in turn is parametrized for a particular system studied, usually by means of time-domain methods based on explicit molecular dynamics data. Here, we discuss that this task is more naturally achieved in frequency domain and develop a Fourier-based parametrization method that outperforms its time-domain analogues. Very surprisingly, the widely used rigid bond method turns out to be inappropriate in general. Importantly, we show that the rigid bond approach leads to a systematic overestimation of relaxation times, unless the system under study consists of a harmonic bath bi-linearly coupled to the relevant degrees of freedom.

  9. Parametrizing linear generalized Langevin dynamics from explicit molecular dynamics simulations

    Energy Technology Data Exchange (ETDEWEB)

    Gottwald, Fabian; Karsten, Sven; Ivanov, Sergei D., E-mail: sergei.ivanov@uni-rostock.de; Kühn, Oliver [Institute of Physics, Rostock University, Universitätsplatz 3, 18055 Rostock (Germany)

    2015-06-28

    Fundamental understanding of complex dynamics in many-particle systems on the atomistic level is of utmost importance. Often the systems of interest are of macroscopic size but can be partitioned into a few important degrees of freedom which are treated most accurately and others which constitute a thermal bath. Particular attention in this respect attracts the linear generalized Langevin equation, which can be rigorously derived by means of a linear projection technique. Within this framework, a complicated interaction with the bath can be reduced to a single memory kernel. This memory kernel in turn is parametrized for a particular system studied, usually by means of time-domain methods based on explicit molecular dynamics data. Here, we discuss that this task is more naturally achieved in frequency domain and develop a Fourier-based parametrization method that outperforms its time-domain analogues. Very surprisingly, the widely used rigid bond method turns out to be inappropriate in general. Importantly, we show that the rigid bond approach leads to a systematic overestimation of relaxation times, unless the system under study consists of a harmonic bath bi-linearly coupled to the relevant degrees of freedom.

  10. General Composite Higgs Models

    CERN Document Server

    Marzocca, David; Shu, Jing

    2012-01-01

    We construct a general class of pseudo-Goldstone composite Higgs models, within the minimal $SO(5)/SO(4)$ coset structure, that are not necessarily of moose-type. We characterize the main properties these models should have in order to give rise to a Higgs mass at around 125 GeV. We assume the existence of relatively light and weakly coupled spin 1 and 1/2 resonances. In absence of a symmetry principle, we introduce the Minimal Higgs Potential (MHP) hypothesis: the Higgs potential is assumed to be one-loop dominated by the SM fields and the above resonances, with a contribution that is made calculable by imposing suitable generalizations of the first and second Weinberg sum rules. We show that a 125 GeV Higgs requires light, often sub-TeV, fermion resonances. Their presence can also be important for the model to successfully pass the electroweak precision tests. Interestingly enough, the latter can be passed also by models with a heavy Higgs around 320 GeV. The composite Higgs models of the moose-type conside...

  11. General treatment of the non-linear Rsub(Xi) gauge condition

    Energy Technology Data Exchange (ETDEWEB)

    Girardi, G.; Malleville, C.; Sorba, P. (Grenoble-1 Univ., 74 - Annecy (France). Lab. de Physique des Particules)

    1982-11-04

    It is shown that the non-linear Rsub(xi) gauge condition already introduced for the standard SU(2)xU(1) model can be generalized for any gauge model with the same type of simplification, namely the suppression of any coupling of the form: (massless gauge boson)x(massive gauge boson)x(unphysical Higgs).

  12. Model averaging for semiparametric additive partial linear models

    Institute of Scientific and Technical Information of China (English)

    2010-01-01

    To improve the prediction accuracy of semiparametric additive partial linear models(APLM) and the coverage probability of confidence intervals of the parameters of interest,we explore a focused information criterion for model selection among ALPM after we estimate the nonparametric functions by the polynomial spline smoothing,and introduce a general model average estimator.The major advantage of the proposed procedures is that iterative backfitting implementation is avoided,which thus results in gains in computational simplicity.The resulting estimators are shown to be asymptotically normal.A simulation study and a real data analysis are presented for illustrations.

  13. Comparing linear probability model coefficients across groups

    DEFF Research Database (Denmark)

    Holm, Anders; Ejrnæs, Mette; Karlson, Kristian Bernt

    2015-01-01

    This article offers a formal identification analysis of the problem in comparing coefficients from linear probability models between groups. We show that differences in coefficients from these models can result not only from genuine differences in effects, but also from differences in one or more...... of the following three components: outcome truncation, scale parameters and distributional shape of the predictor variable. These results point to limitations in using linear probability model coefficients for group comparisons. We also provide Monte Carlo simulations and real examples to illustrate...... these limitations, and we suggest a restricted approach to using linear probability model coefficients in group comparisons....

  14. Generalized space and linear momentum operators in quantum mechanics

    Energy Technology Data Exchange (ETDEWEB)

    Costa, Bruno G. da, E-mail: bruno.costa@ifsertao-pe.edu.br [Instituto Federal de Educação, Ciência e Tecnologia do Sertão Pernambucano, Campus Petrolina, BR 407, km 08, 56314-520 Petrolina, Pernambuco (Brazil); Instituto de Física, Universidade Federal da Bahia, R. Barão de Jeremoabo s/n, 40170-115 Salvador, Bahia (Brazil); Borges, Ernesto P., E-mail: ernesto@ufba.br [Instituto de Física, Universidade Federal da Bahia, R. Barão de Jeremoabo s/n, 40170-115 Salvador, Bahia (Brazil)

    2014-06-15

    We propose a modification of a recently introduced generalized translation operator, by including a q-exponential factor, which implies in the definition of a Hermitian deformed linear momentum operator p{sup ^}{sub q}, and its canonically conjugate deformed position operator x{sup ^}{sub q}. A canonical transformation leads the Hamiltonian of a position-dependent mass particle to another Hamiltonian of a particle with constant mass in a conservative force field of a deformed phase space. The equation of motion for the classical phase space may be expressed in terms of the generalized dual q-derivative. A position-dependent mass confined in an infinite square potential well is shown as an instance. Uncertainty and correspondence principles are analyzed.

  15. A BEHAVIORAL-APPROACH TO LINEAR EXACT MODELING

    NARCIS (Netherlands)

    ANTOULAS, AC; WILLEMS, JC

    1993-01-01

    The behavioral approach to system theory provides a parameter-free framework for the study of the general problem of linear exact modeling and recursive modeling. The main contribution of this paper is the solution of the (continuous-time) polynomial-exponential time series modeling problem. Both re

  16. General linear methods and friends: Toward efficient solutions of multiphysics problems

    Science.gov (United States)

    Sandu, Adrian

    2017-07-01

    Time dependent multiphysics partial differential equations are of great practical importance as they model diverse phenomena that appear in mechanical and chemical engineering, aeronautics, astrophysics, meteorology and oceanography, financial modeling, environmental sciences, etc. There is no single best time discretization for the complex multiphysics systems of practical interest. We discuss "multimethod" approaches that combine different time steps and discretizations using the rigourous frameworks provided by Partitioned General Linear Methods and Generalize-structure Additive Runge Kutta Methods..

  17. Linear spin-2 fields in most general backgrounds

    CERN Document Server

    Bernard, Laura; Schmidt-May, Angnis; von Strauss, Mikael

    2015-01-01

    We derive the full perturbative equations of motion for the most general background solutions in ghost-free bimetric theory in its metric formulation. Clever field redefinitions at the level of fluctuations enable us to circumvent the problem of varying a square-root matrix appearing in the theory. This greatly simplifies the expressions for the linear variation of the bimetric interaction terms. We show that these field redefinitions exist and are uniquely invertible if and only if the variation of the square-root matrix itself has a unique solution, which is a requirement for the linearised theory to be well-defined. As an application of our results we examine the constraint structure of ghost-free bimetric theory at the level of linear equations of motion for the first time. We identify a scalar combination of equations which is responsible for the absence of the Boulware-Deser ghost mode in the theory. The bimetric scalar constraint is in general not manifestly covariant in its nature. However, in the mas...

  18. General quantum constraints on detector noise in continuous linear measurements

    Science.gov (United States)

    Miao, Haixing

    2017-01-01

    In quantum sensing and metrology, an important class of measurement is the continuous linear measurement, in which the detector is coupled to the system of interest linearly and continuously in time. One key aspect involved is the quantum noise of the detector, arising from quantum fluctuations in the detector input and output. It determines how fast we acquire information about the system and also influences the system evolution in terms of measurement backaction. We therefore often categorize it as the so-called imprecision noise and quantum backaction noise. There is a general Heisenberg-like uncertainty relation that constrains the magnitude of and the correlation between these two types of quantum noise. The main result of this paper is to show that, when the detector becomes ideal, i.e., at the quantum limit with minimum uncertainty, not only does the uncertainty relation takes the equal sign as expected, but also there are two new equalities. This general result is illustrated by using the typical cavity QED setup with the system being either a qubit or a mechanical oscillator. Particularly, the dispersive readout of a qubit state, and the measurement of mechanical motional sideband asymmetry are considered.

  19. S-AMP for non-linear observation models

    DEFF Research Database (Denmark)

    Cakmak, Burak; Winther, Ole; Fleury, Bernard H.

    2015-01-01

    Recently we presented the S-AMP approach, an extension of approximate message passing (AMP), to be able to handle general invariant matrix ensembles. In this contribution we extend S-AMP to non-linear observation models. We obtain generalized AMP (GAMP) as the special case when the measurement...

  20. Sparse Linear Identifiable Multivariate Modeling

    DEFF Research Database (Denmark)

    Henao, Ricardo; Winther, Ole

    2011-01-01

    and bench-marked on artificial and real biological data sets. SLIM is closest in spirit to LiNGAM (Shimizu et al., 2006), but differs substantially in inference, Bayesian network structure learning and model comparison. Experimentally, SLIM performs equally well or better than LiNGAM with comparable...

  1. Non-linear finite element modeling

    DEFF Research Database (Denmark)

    Mikkelsen, Lars Pilgaard

    The note is written for courses in "Non-linear finite element method". The note has been used by the author teaching non-linear finite element modeling at Civil Engineering at Aalborg University, Computational Mechanics at Aalborg University Esbjerg, Structural Engineering at the University...... on the governing equations and methods of implementing....

  2. Correlations and Non-Linear Probability Models

    DEFF Research Database (Denmark)

    Breen, Richard; Holm, Anders; Karlson, Kristian Bernt

    2014-01-01

    the dependent variable of the latent variable model and its predictor variables. We show how this correlation can be derived from the parameters of non-linear probability models, develop tests for the statistical significance of the derived correlation, and illustrate its usefulness in two applications. Under......Although the parameters of logit and probit and other non-linear probability models are often explained and interpreted in relation to the regression coefficients of an underlying linear latent variable model, we argue that they may also be usefully interpreted in terms of the correlations between...... certain circumstances, which we explain, the derived correlation provides a way of overcoming the problems inherent in cross-sample comparisons of the parameters of non-linear probability models....

  3. Linear mixed models for longitudinal data

    CERN Document Server

    Molenberghs, Geert

    2000-01-01

    This paperback edition is a reprint of the 2000 edition. This book provides a comprehensive treatment of linear mixed models for continuous longitudinal data. Next to model formulation, this edition puts major emphasis on exploratory data analysis for all aspects of the model, such as the marginal model, subject-specific profiles, and residual covariance structure. Further, model diagnostics and missing data receive extensive treatment. Sensitivity analysis for incomplete data is given a prominent place. Several variations to the conventional linear mixed model are discussed (a heterogeity model, conditional linear mixed models). This book will be of interest to applied statisticians and biomedical researchers in industry, public health organizations, contract research organizations, and academia. The book is explanatory rather than mathematically rigorous. Most analyses were done with the MIXED procedure of the SAS software package, and many of its features are clearly elucidated. However, some other commerc...

  4. Latent log-linear models for handwritten digit classification.

    Science.gov (United States)

    Deselaers, Thomas; Gass, Tobias; Heigold, Georg; Ney, Hermann

    2012-06-01

    We present latent log-linear models, an extension of log-linear models incorporating latent variables, and we propose two applications thereof: log-linear mixture models and image deformation-aware log-linear models. The resulting models are fully discriminative, can be trained efficiently, and the model complexity can be controlled. Log-linear mixture models offer additional flexibility within the log-linear modeling framework. Unlike previous approaches, the image deformation-aware model directly considers image deformations and allows for a discriminative training of the deformation parameters. Both are trained using alternating optimization. For certain variants, convergence to a stationary point is guaranteed and, in practice, even variants without this guarantee converge and find models that perform well. We tune the methods on the USPS data set and evaluate on the MNIST data set, demonstrating the generalization capabilities of our proposed models. Our models, although using significantly fewer parameters, are able to obtain competitive results with models proposed in the literature.

  5. Correlations and Non-Linear Probability Models

    DEFF Research Database (Denmark)

    Breen, Richard; Holm, Anders; Karlson, Kristian Bernt

    2014-01-01

    Although the parameters of logit and probit and other non-linear probability models are often explained and interpreted in relation to the regression coefficients of an underlying linear latent variable model, we argue that they may also be usefully interpreted in terms of the correlations betwee...... certain circumstances, which we explain, the derived correlation provides a way of overcoming the problems inherent in cross-sample comparisons of the parameters of non-linear probability models.......Although the parameters of logit and probit and other non-linear probability models are often explained and interpreted in relation to the regression coefficients of an underlying linear latent variable model, we argue that they may also be usefully interpreted in terms of the correlations between...... the dependent variable of the latent variable model and its predictor variables. We show how this correlation can be derived from the parameters of non-linear probability models, develop tests for the statistical significance of the derived correlation, and illustrate its usefulness in two applications. Under...

  6. When to Use Hierarchical Linear Modeling

    National Research Council Canada - National Science Library

    Veronika Huta

    2014-01-01

    Previous publications on hierarchical linear modeling (HLM) have provided guidance on how to perform the analysis, yet there is relatively little information on two questions that arise even before analysis...

  7. An introduction to hierarchical linear modeling

    National Research Council Canada - National Science Library

    Woltman, Heather; Feldstain, Andrea; MacKay, J. Christine; Rocchi, Meredith

    2012-01-01

    This tutorial aims to introduce Hierarchical Linear Modeling (HLM). A simple explanation of HLM is provided that describes when to use this statistical technique and identifies key factors to consider before conducting this analysis...

  8. A new family of gauges in linearized general relativity

    Science.gov (United States)

    Esposito, Giampiero; Stornaiolo, Cosimo

    2000-05-01

    For vacuum Maxwell theory in four dimensions, a supplementary condition exists (due to Eastwood and Singer) which is invariant under conformal rescalings of the metric, in agreement with the conformal symmetry of the Maxwell equations. Thus, starting from the de Donder gauge, which is not conformally invariant but is the gravitational counterpart of the Lorenz gauge, one can consider, led by formal analogy, a new family of gauges in general relativity, which involve fifth-order covariant derivatives of metric perturbations. The admissibility of such gauges in the classical theory is first proven in the cases of linearized theory about flat Euclidean space or flat Minkowski spacetime. In the former, the general solution of the equation for the fulfillment of the gauge condition after infinitesimal diffeomorphisms involves a 3-harmonic 1-form and an inverse Fourier transform. In the latter, one needs instead the kernel of powers of the wave operator, and a contour integral. The analysis is also used to put restrictions on the dimensionless parameter occurring in the DeWitt supermetric, while the proof of admissibility is generalized to a suitable class of curved Riemannian backgrounds. Eventually, a non-local construction of the tensor field is obtained which makes it possible to achieve conformal invariance of the above gauges.

  9. Statistical Tests for Mixed Linear Models

    CERN Document Server

    Khuri, André I; Sinha, Bimal K

    2011-01-01

    An advanced discussion of linear models with mixed or random effects. In recent years a breakthrough has occurred in our ability to draw inferences from exact and optimum tests of variance component models, generating much research activity that relies on linear models with mixed and random effects. This volume covers the most important research of the past decade as well as the latest developments in hypothesis testing. It compiles all currently available results in the area of exact and optimum tests for variance component models and offers the only comprehensive treatment for these models a

  10. Matrix Tricks for Linear Statistical Models

    CERN Document Server

    Puntanen, Simo; Styan, George PH

    2011-01-01

    In teaching linear statistical models to first-year graduate students or to final-year undergraduate students there is no way to proceed smoothly without matrices and related concepts of linear algebra; their use is really essential. Our experience is that making some particular matrix tricks very familiar to students can substantially increase their insight into linear statistical models (and also multivariate statistical analysis). In matrix algebra, there are handy, sometimes even very simple "tricks" which simplify and clarify the treatment of a problem - both for the student and

  11. Mixed Task and Data Parallel Executions in General Linear Methods

    Directory of Open Access Journals (Sweden)

    Thomas Rauber

    2007-01-01

    Full Text Available On many parallel target platforms it can be advantageous to implement parallel applications as a collection of multiprocessor tasks that are concurrently executed and are internally implemented with fine-grain SPMD parallelism. A class of applications which can benefit from this programming style are methods for solving systems of ordinary differential equations. Many recent solvers have been designed with an additional potential of method parallelism, but the actual effectiveness of mixed task and data parallelism depends on the specific communication and computation requirements imposed by the equation to be solved. In this paper we study mixed task and data parallel implementations for general linear methods realized using a library for multiprocessor task programming. Experiments on a number of different platforms show good efficiency results.

  12. Applying generalized linear models as an explanatory tool of sex steroids, thyroid hormones and their relationships with environmental and physiologic factors in immature East Pacific green sea turtles (Chelonia mydas).

    Science.gov (United States)

    Labrada-Martagón, Vanessa; Méndez-Rodríguez, Lia C; Mangel, Marc; Zenteno-Savín, Tania

    2013-09-01

    Generalized linear models were fitted to evaluate the relationship between 17β-estradiol (E2), testosterone (T) and thyroxine (T4) levels in immature East Pacific green sea turtles (Chelonia mydas) and their body condition, size, mass, blood biochemistry parameters, handling time, year, season and site of capture. According to external (tail size) and morphological (<77.3 straight carapace length) characteristics, 95% of the individuals were juveniles. Hormone levels, assessed on sea turtles subjected to a capture stress protocol, were <34.7nmolTL(-1), <532.3pmolE2 L(-1) and <43.8nmolT4L(-1). The statistical model explained biologically plausible metabolic relationships between hormone concentrations and blood biochemistry parameters (e.g. glucose, cholesterol) and the potential effect of environmental variables (season and study site). The variables handling time and year did not contribute significantly to explain hormone levels. Differences in sex steroids between season and study sites found by the models coincided with specific nutritional, physiological and body condition differences related to the specific habitat conditions. The models correctly predicted the median levels of the measured hormones in green sea turtles, which confirms the fitted model's utility. It is suggested that quantitative predictions could be possible when the model is tested with additional data.

  13. Testing linearity against nonlinear moving average models

    NARCIS (Netherlands)

    de Gooijer, J.G.; Brännäs, K.; Teräsvirta, T.

    1998-01-01

    Lagrange multiplier (LM) test statistics are derived for testing a linear moving average model against an additive smooth transition moving average model. The latter model is introduced in the paper. The small sample performance of the proposed tests are evaluated in a Monte Carlo study and compared

  14. Locally supersymmetric D=3 non-linear sigma models

    NARCIS (Netherlands)

    Wit, B. de; Tollsten, A. K.; Nicolai, H.

    1992-01-01

    We study non-linear sigma models with N local supersymmetries in three space-time dimensions. For N=1 and 2 the target space of these models is Riemannian or Kahler, respectively. All N>2 theories are associated with Einstein spaces. For N=3 the target space is quaternionic, while for N=4 it general

  15. Optical linear algebra processors: noise and error-source modeling.

    Science.gov (United States)

    Casasent, D; Ghosh, A

    1985-06-01

    The modeling of system and component noise and error sources in optical linear algebra processors (OLAP's) are considered, with attention to the frequency-multiplexed OLAP. General expressions are obtained for the output produced as a function of various component errors and noise. A digital simulator for this model is discussed.

  16. Optical linear algebra processors - Noise and error-source modeling

    Science.gov (United States)

    Casasent, D.; Ghosh, A.

    1985-01-01

    The modeling of system and component noise and error sources in optical linear algebra processors (OLAPs) are considered, with attention to the frequency-multiplexed OLAP. General expressions are obtained for the output produced as a function of various component errors and noise. A digital simulator for this model is discussed.

  17. Generalized Partially Linear Regression with Misclassified Data and an Application to Labour Market Transitions

    DEFF Research Database (Denmark)

    Dlugosz, Stephan; Mammen, Enno; Wilke, Ralf

    2017-01-01

    observations from Germany. It is shown that estimated marginal effects of a number of covariates are sizeably affected by misclassification and missing values in the analysis data. The proposed generalized partially linear regression extends existing models by allowing a misclassified discrete covariate...

  18. Global identifiability of linear structural equation models

    CERN Document Server

    Drton, Mathias; Sullivant, Seth

    2010-01-01

    Structural equation models are multivariate statistical models that are defined by specifying noisy functional relationships among random variables. We consider the classical case of linear relationships and additive Gaussian noise terms. We give a necessary and sufficient condition for global identifiability of the model in terms of a mixed graph encoding the linear structural equations and the correlation structure of the error terms. Global identifiability is understood to mean injectivity of the parametrization of the model and is fundamental in particular for applicability of standard statistical methodology.

  19. Modeling digital switching circuits with linear algebra

    CERN Document Server

    Thornton, Mitchell A

    2014-01-01

    Modeling Digital Switching Circuits with Linear Algebra describes an approach for modeling digital information and circuitry that is an alternative to Boolean algebra. While the Boolean algebraic model has been wildly successful and is responsible for many advances in modern information technology, the approach described in this book offers new insight and different ways of solving problems. Modeling the bit as a vector instead of a scalar value in the set {0, 1} allows digital circuits to be characterized with transfer functions in the form of a linear transformation matrix. The use of transf

  20. Non linear behaviour of cell tensegrity models

    Science.gov (United States)

    Alippi, A.; Bettucci, A.; Biagioni, A.; Conclusio, D.; D'Orazio, A.; Germano, M.; Passeri, D.

    2012-05-01

    Tensegrity models for the cytoskeleton structure of living cells is largely used nowadays for interpreting the biochemical response of living tissues to mechanical stresses. Microtubules, microfilaments and filaments are the microscopic cell counterparts of struts (microtubules) and cables (microfilaments and filaments) in the macroscopic world: the formers oppose to compression, the latters to tension, thus yielding an overall structure, light and highly deformable. Specific cell surface receptors, such as integrins, act as the coupling elements that transmit the outside mechanical stress state into the cell body. Reversible finite deformations of tensegrity structures have been widely demonstrated experimentally and in a number of living cell simulations. In the present paper, the bistability behaviour of two general models, the linear bar oscillator and the icosahedron, is studied, as they are both obtained from mathematical simulation, the former, and from larger scale experiments, the latter. The discontinuity in the frequency response of the oscillation amplitude and the lateral bending of the resonance curves are put in evidence, as it grows larger as the driving amplitude increases, respectively.

  1. Identification and Modelling of Linear Dynamic Systems

    Directory of Open Access Journals (Sweden)

    Stanislav Kocur

    2006-01-01

    Full Text Available System identification and modelling are very important parts of system control theory. System control is only as good as good is created model of system. So this article deals with identification and modelling problems. There are simple classification and evolution of identification methods, and then the modelling problem is described. Rest of paper is devoted to two most known and used models of linear dynamic systems.

  2. A New Family of Gauges in Linearized General Relativity

    CERN Document Server

    Esposito, G; Esposito, Giampiero; Stornaiolo, Cosimo

    2000-01-01

    For vacuum Maxwell theory in four dimensions, a supplementary condition exists (due to Eastwood and Singer) which is invariant under conformal rescalings of the metric, in agreement with the conformal symmetry of the Maxwell equations. Thus, starting from the de Donder gauge, which is not conformally invariant but is the gravitational counterpart of the Lorenz gauge, one can consider, led by formal analogy, a new family of gauges in general relativity, which involve fifth-order covariant derivatives of metric perturbations. The admissibility of such gauges in the classical theory is here proven in the cases of linearized theory about flat Euclidean space or flat Minkowski space-time. In the former, the general solution of the equation for the fulfillment of the gauge condition after infinitesimal diffeomorphisms involves a 3-harmonic function and an inverse Fourier transform. In the latter, one needs instead the kernel of powers of the wave operator, and a contour integral. The analysis is also used to put re...

  3. Linear and nonlinear associations between general intelligence and personality in Project TALENT.

    Science.gov (United States)

    Major, Jason T; Johnson, Wendy; Deary, Ian J

    2014-04-01

    Research on the relations of personality traits to intelligence has primarily been concerned with linear associations. Yet, there are no a priori reasons why linear relations should be expected over nonlinear ones, which represent a much larger set of all possible associations. Using 2 techniques, quadratic and generalized additive models, we tested for linear and nonlinear associations of general intelligence (g) with 10 personality scales from Project TALENT (PT), a nationally representative sample of approximately 400,000 American high school students from 1960, divided into 4 grade samples (Flanagan et al., 1962). We departed from previous studies, including one with PT (Reeve, Meyer, & Bonaccio, 2006), by modeling latent quadratic effects directly, controlling the influence of the common factor in the personality scales, and assuming a direction of effect from g to personality. On the basis of the literature, we made 17 directional hypotheses for the linear and quadratic associations. Of these, 53% were supported in all 4 male grades and 58% in all 4 female grades. Quadratic associations explained substantive variance above and beyond linear effects (mean R² between 1.8% and 3.6%) for Sociability, Maturity, Vigor, and Leadership in males and Sociability, Maturity, and Tidiness in females; linear associations were predominant for other traits. We discuss how suited current theories of the personality-intelligence interface are to explain these associations, and how research on intellectually gifted samples may provide a unique way of understanding them. We conclude that nonlinear models can provide incremental detail regarding personality and intelligence associations.

  4. Using generalized linear (mixed) models in HCI

    NARCIS (Netherlands)

    Kaptein, M.C.; Robertson, J; Kaptein, M

    2016-01-01

    In HCI we often encounter dependent variables which are not (conditionally) normally distributed: we measure response-times, mouse-clicks, or the number of dialog steps it took a user to complete a task. Furthermore, we often encounter nested or grouped data; users are grouped within companies or in

  5. Linear Characteristic Graphical Models: Representation, Inference and Applications

    CERN Document Server

    Bickson, Danny

    2010-01-01

    Heavy-tailed distributions naturally occur in many real life problems. Unfortunately, it is typically not possible to compute inference in closed-form in graphical models which involve such heavy-tailed distributions. In this work, we propose a novel simple linear graphical model for independent latent random variables, called linear characteristic model (LCM), defined in the characteristic function domain. Using stable distributions, a heavy-tailed family of distributions which is a generalization of Cauchy, L\\'evy and Gaussian distributions, we show for the first time, how to compute both exact and approximate inference in such a linear multivariate graphical model. LCMs are not limited to stable distributions, in fact LCMs are always defined for any random variables (discrete, continuous or a mixture of both). We provide a realistic problem from the field of computer networks to demonstrate the applicability of our construction. Other potential application is iterative decoding of linear channels with non-...

  6. Vaccination strategies for SEIR models using feedback linearization. Preliminary results

    CERN Document Server

    De la Sen, M; Alonso-Quesada, S

    2011-01-01

    A linearization-based feedback-control strategy for a SEIR epidemic model is discussed. The vaccination objective is the asymptotically tracking of the removed-by-immunity population to the total population while achieving simultaneously the remaining population (i.e. susceptible plus infected plus infectious) to asymptotically tend to zero. The disease controlpolicy is designed based on a feedback linearization technique which provides a general method to generate families of vaccination policies with sound technical background.

  7. Disc instantons in linear sigma models

    Energy Technology Data Exchange (ETDEWEB)

    Govindarajan, Suresh E-mail: suresh@chaos.iitm.ernet.in; Jayaraman, T. E-mail: jayaram@imsc.ernet.in; Sarkar, Tapobrata E-mail: tapo@theory.tifr.res.in

    2002-12-16

    We construct a linear sigma model for open-strings ending on special Lagrangian cycles of a Calabi-Yau manifold. We illustrate the construction for the cases considered by Aganagic and Vafa (AV). This leads naturally to concrete models for the moduli space of open-string instantons. These instanton moduli spaces can be seen to be intimately related to certain auxiliary boundary toric varieties. By considering the relevant Gelfand-Kapranov-Zelevinsky (GKZ) differential equations of the boundary toric variety, we obtain the contributions to the world volume superpotential on the A-branes from open-string instantons. By using an ansatz due to Aganagic, Klemm and Vafa (AKV), we obtain the relevant change of variables from the linear sigma model to the non-linear sigma model variables--the open-string mirror map. Using this mirror map, we obtain results in agreement with those of AV and AKV for the counting of holomorphic disc instantons.

  8. The general RF tuning for IH-DTL linear accelerators

    Science.gov (United States)

    Lu, Y. R.; Ratzinger, U.; Schlitt, B.; Tiede, R.

    2007-11-01

    The RF tuning is the most important research for achieving the resonant frequency and the flatness of electric field distributions along the axis of RF accelerating structures. The six different tuning concepts and that impacts on the longitudinal field distributions have been discussed in detail combining the RF tuning process of a 1:2 modeled 20.85 MV compact IH-DTL cavity, which was designed to accelerate proton, helium, oxygen or C 4+ from 400 keV/ u to 7 MeV/u and used as the linear injector of 430 MeV/ u synchrotron [Y.R. Lu, S. Minaev, U. Ratzinger, B. Schlitt, R.Tiede, The Compact 20MV IH-DTL for the Heidelberg Therapy Facility, in: Proceedings of the LINAC Conference, Luebeck, Germany, 2004 [1]; Y.R. Lu, Frankfurt University Dissertation, 2005. [2

  9. The linearized inversion of the generalized interferometric multiple imaging

    KAUST Repository

    Aldawood, Ali

    2016-09-06

    The generalized interferometric multiple imaging (GIMI) procedure can be used to image duplex waves and other higher order internal multiples. Imaging duplex waves could help illuminate subsurface zones that are not easily illuminated by primaries such as vertical and nearly vertical fault planes, and salt flanks. To image first-order internal multiple, the GIMI framework consists of three datuming steps, followed by applying the zero-lag cross-correlation imaging condition. However, the standard GIMI procedure yields migrated images that suffer from low spatial resolution, migration artifacts, and cross-talk noise. To alleviate these problems, we propose a least-squares GIMI framework in which we formulate the first two steps as a linearized inversion problem when imaging first-order internal multiples. Tests on synthetic datasets demonstrate the ability to localize subsurface scatterers in their true positions, and delineate a vertical fault plane using the proposed method. We, also, demonstrate the robustness of the proposed framework when imaging the scatterers or the vertical fault plane with erroneous migration velocities.

  10. An R companion to linear statistical models

    CERN Document Server

    Hay-Jahans, Christopher

    2011-01-01

    Focusing on user-developed programming, An R Companion to Linear Statistical Models serves two audiences: those who are familiar with the theory and applications of linear statistical models and wish to learn or enhance their skills in R; and those who are enrolled in an R-based course on regression and analysis of variance. For those who have never used R, the book begins with a self-contained introduction to R that lays the foundation for later chapters.This book includes extensive and carefully explained examples of how to write programs using the R programming language. These examples cove

  11. Ruin Probability in Linear Time Series Model

    Institute of Scientific and Technical Information of China (English)

    ZHANG Lihong

    2005-01-01

    This paper analyzes a continuous time risk model with a linear model used to model the claim process. The time is discretized stochastically using the times when claims occur, using Doob's stopping time theorem and martingale inequalities to obtain expressions for the ruin probability as well as both exponential and non-exponential upper bounds for the ruin probability for an infinite time horizon. Numerical results are included to illustrate the accuracy of the non-exponential bound.

  12. Are all Linear Paired Comparison Models Equivalent

    Science.gov (United States)

    1990-09-01

    Previous authors (Jackson and Fleckenstein 1957, Mosteller 1958, Noether 1960) have found that different models of paired comparisons data lead to simi...ponential distribution with a location parameter (Mosteller 1958, Noether 1960). Formal statements describing the limiting behavior of the gamma...that are not convolu- tion type linear models (the uniform model considered by Smith (1956), Mosteller (1958), Noether (1960)) and other convolution

  13. Orthogonal Nilpotent Superfields from Linear Models

    CERN Document Server

    Kallosh, Renata; Mosk, Benjamin; Murli, Divyanshu

    2016-01-01

    We derive supersymmetry/supergravity models with constrained orthogonal nilpotent superfields from the linear models in the formal limit when the masses of the sgoldstino, inflatino and sinflaton tend to infinity. The case when the sinflaton mass remains finite leads to a model with a `relaxed' constraint, where the sinflaton remains an independent field. Our procedure is equivalent to a requirement that some of the components of the curvature of the moduli space tend to infinity.

  14. The general RF tuning for IH-DTL linear accelerators

    Energy Technology Data Exchange (ETDEWEB)

    Lu, Y.R. [Key State Laboratory of Nuclear Physics and Technology, Peking University (China)], E-mail: yrlu@pku.edu.cn; Ratzinger, U. [Institute of Applied Physics, Frankfurt University (Germany); Schlitt, B. [Gesellschaft fuer Schwerionenforschung, mbH, Darmstadt (Germany); Tiede, R. [Institute of Applied Physics, Frankfurt University (Germany)

    2007-11-21

    The RF tuning is the most important research for achieving the resonant frequency and the flatness of electric field distributions along the axis of RF accelerating structures. The six different tuning concepts and that impacts on the longitudinal field distributions have been discussed in detail combining the RF tuning process of a 1:2 modeled 20.85 MV compact IH-DTL cavity, which was designed to accelerate proton, helium, oxygen or C{sup 4+} from 400 keV/u to 7 MeV/u and used as the linear injector of 430 MeV/u synchrotron [Y.R. Lu, S. Minaev, U. Ratzinger, B. Schlitt, R.Tiede, The Compact 20MV IH-DTL for the Heidelberg Therapy Facility, in: Proceedings of the LINAC Conference, Luebeck, Germany, 2004 ; Y.R. Lu, Frankfurt University Dissertation, 2005. ] in Heidelberg Heavy Ion Cancer Therapy (HICAT). Some of tuning concepts are also suitable and effective for the tuning of RFQ and/or other RF accelerating structures. Finally good field flatness in IH-DTL cavity has been realized successfully. The experience got from the model cavity tuning benefits real power cavity tuning, which is only needed to be tuned by the plungers. The cavity had a beam commissioning successfully for the initial beam acceleration at the end of 2006.

  15. Phylogenetic mixtures and linear invariants for equal input models.

    Science.gov (United States)

    Casanellas, Marta; Steel, Mike

    2017-04-01

    The reconstruction of phylogenetic trees from molecular sequence data relies on modelling site substitutions by a Markov process, or a mixture of such processes. In general, allowing mixed processes can result in different tree topologies becoming indistinguishable from the data, even for infinitely long sequences. However, when the underlying Markov process supports linear phylogenetic invariants, then provided these are sufficiently informative, the identifiability of the tree topology can be restored. In this paper, we investigate a class of processes that support linear invariants once the stationary distribution is fixed, the 'equal input model'. This model generalizes the 'Felsenstein 1981' model (and thereby the Jukes-Cantor model) from four states to an arbitrary number of states (finite or infinite), and it can also be described by a 'random cluster' process. We describe the structure and dimension of the vector spaces of phylogenetic mixtures and of linear invariants for any fixed phylogenetic tree (and for all trees-the so called 'model invariants'), on any number n of leaves. We also provide a precise description of the space of mixtures and linear invariants for the special case of [Formula: see text] leaves. By combining techniques from discrete random processes and (multi-) linear algebra, our results build on a classic result that was first established by James Lake (Mol Biol Evol 4:167-191, 1987).

  16. MODELLING AND CONTROLLING OF INDUCTION MOTOR BY USING LINEAR ADRC

    Directory of Open Access Journals (Sweden)

    CH. NAGA KOTI KUMAR,

    2011-04-01

    Full Text Available In this paper we present a new novel approach for the speed control of an IM using Linear Active Disturbance Rejection Controller [LADRC]. The field oriented control of IM needs the accuratemathematical model of IM, but it is very difficult to develop an accurate mathematical model. The LADRC does depend on the mathematical model so it is very robust to changes in plant parameters. This controller can also estimate and compensate the general disturbances which include the unknown internal dynamics and external disturbances by using the Extended State Observer, which can reduce the system to a linear one.

  17. A Concise Spectrum Model for General Bistatic SAR Using Linear compensation function%基于线性补偿函数的机载双基SAR二维频谱研究

    Institute of Scientific and Technical Information of China (English)

    黄欢

    2014-01-01

    简洁的二维频谱解析式模型是研究任意构型的机载双基SAR成像算法的基础。本文提出一种适用于任意构型的机载双基SAR二维频谱解析表达式,它是通过利用曲线拟合和驻定相位定理得到的。首先,采用泰勒级数定理将机载双基SAR的斜距史函数等效为双曲线和线性误差补偿函数的复合函数。接下来,利用驻定相位定理得到最终的二维频谱表达式。对于机载双基SAR,上述二维频谱模型是精确且简洁的。最后,通过大量的仿真结果验证了上述二维频谱模型的有效性。%A concise two-dimensional frequency spectrum analytic model is the basis of general Airplane-Airplane Bistatic SAR (GAA-BiSAR) imaging algorithm. In this paper, it presents an analytic expression of frequency spectrum for general Airborne-Airborne Bistatic SAR (GAA-BiSAR) derived by utilizing the curve fitting approach and the principle of stationary phase (POSP). Firstly, the overall slant range history of GAA-BiSAR is fitted into a hyperbolic function with linear compensation function based on the Taylor formula. Then, the POSP is performed to obtain the spectrum expression. The proposed spectrum model is concise and accurate for the GAA-BiSAR. Finally, simulation results with GAA-BiSARdemonstrate the validity of the proposed spectrum model.

  18. Tests of risk premia in linear factor models

    NARCIS (Netherlands)

    Kleibergen, F.

    2009-01-01

    We show that statistical inference on the risk premia in linear factor models that is based on the Fama-MacBeth (FM) and generalized least squares (GLS) two-pass risk premia estimators is misleading when the β’s are small and/or the number of assets is large. We propose novel statistics, that are ba

  19. Tests of risk premia in linear factor models

    NARCIS (Netherlands)

    Kleibergen, F.

    2009-01-01

    We show that statistical inference on the risk premia in linear factor models that is based on the Fama-MacBeth (FM) and generalized least squares (GLS) two-pass risk premia estimators is misleading when the β’s are small and/or the number of assets is large. We propose novel statistics, that are

  20. The Moduli Space in the Gauged Linear Sigma Model

    CERN Document Server

    Fan, Huijun; Ruan, Yongbin

    2016-01-01

    This is a survey article for the mathematical theory of Witten's Gauged Linear Sigma Model, as developed recently by the authors. Instead of developing the theory in the most general setting, in this paper we focus on the description of the moduli.

  1. Managing Clustered Data Using Hierarchical Linear Modeling

    Science.gov (United States)

    Warne, Russell T.; Li, Yan; McKyer, E. Lisako J.; Condie, Rachel; Diep, Cassandra S.; Murano, Peter S.

    2012-01-01

    Researchers in nutrition research often use cluster or multistage sampling to gather participants for their studies. These sampling methods often produce violations of the assumption of data independence that most traditional statistics share. Hierarchical linear modeling is a statistical method that can overcome violations of the independence…

  2. Model reduction of linear conservative mechanical systems

    NARCIS (Netherlands)

    Schaft, van der A.J.; Oeloff, J.E.

    1990-01-01

    An approach for model reduction of linear conservative or weakly damped mechanical systems is proposed. It is based on the balancing of an associated gradient system. It uses the joint knowledge of the system matrix and the input and output matrices of the Hamiltonian system. The key idea is to asso

  3. Managing Clustered Data Using Hierarchical Linear Modeling

    Science.gov (United States)

    Warne, Russell T.; Li, Yan; McKyer, E. Lisako J.; Condie, Rachel; Diep, Cassandra S.; Murano, Peter S.

    2012-01-01

    Researchers in nutrition research often use cluster or multistage sampling to gather participants for their studies. These sampling methods often produce violations of the assumption of data independence that most traditional statistics share. Hierarchical linear modeling is a statistical method that can overcome violations of the independence…

  4. On Bayes linear unbiased estimation of estimable functions for the singular linear model

    Institute of Scientific and Technical Information of China (English)

    ZHANG Weiping; WEI Laisheng

    2005-01-01

    The unique Bayes linear unbiased estimator (Bayes LUE) of estimable functions is derived for the singular linear model. The superiority of Bayes LUE over ordinary best linear unbiased estimator is investigated under mean square error matrix (MSEM)criterion.

  5. Non-linear Loudspeaker Unit Modelling

    DEFF Research Database (Denmark)

    Pedersen, Bo Rohde; Agerkvist, Finn T.

    2008-01-01

    Simulations of a 6½-inch loudspeaker unit are performed and compared with a displacement measurement. The non-linear loudspeaker model is based on the major nonlinear functions and expanded with time-varying suspension behaviour and flux modulation. The results are presented with FFT plots of three...... frequencies and different displacement levels. The model errors are discussed and analysed including a test with loudspeaker unit where the diaphragm is removed....

  6. Linear Programming建模研讨%Modeling of Linear Programming

    Institute of Scientific and Technical Information of China (English)

    宋占奎; 於全收; 范光; 燕嬿; 胡杰军

    2007-01-01

    研究用图解法、simplexmethod和匈牙利法建立Linear Programming的数学模型并求得了最优解.结果表明:对仅有两个变量的Linear Programming,既可通过图解法求得最优解;也可用单纯形表简便地求得最优解;而对任务和人数不等的assignment problem,则用匈牙利法求最优解.

  7. NGPG-STABILITY OF LINEAR MULTISTEP METHODS FOR SYSTEMS OF GENERALIZED NEUTRAL DELAY DIFFERENTIAL EQUATIONS

    Institute of Scientific and Technical Information of China (English)

    丛玉豪

    2001-01-01

    The stability analysis of linear multistep methods for the numerical solutions of the systems of generalized neutral delay differential equations is discussed. The stability behaviour of linear multistep methods was analysed for the solution of the generalized system of linear neutral test equations. After the establishment of a sufficient condition for asymptotic stability of the solutions of the generalized system, it is shown that a linear multistep method is NGPG-stable if and only if it is A-stable.

  8. Efficient estimation of moments in linear mixed models

    CERN Document Server

    Wu, Ping; Zhu, Li-Xing; 10.3150/10-BEJ330

    2012-01-01

    In the linear random effects model, when distributional assumptions such as normality of the error variables cannot be justified, moments may serve as alternatives to describe relevant distributions in neighborhoods of their means. Generally, estimators may be obtained as solutions of estimating equations. It turns out that there may be several equations, each of them leading to consistent estimators, in which case finding the efficient estimator becomes a crucial problem. In this paper, we systematically study estimation of moments of the errors and random effects in linear mixed models.

  9. Neural Network for Combining Linear and Non-Linear Modelling of Dynamic Systems

    DEFF Research Database (Denmark)

    Madsen, Per Printz

    1994-01-01

    The purpose of this paper is to develop a method to combine linear models with MLP networks. In other words to find a method to make a non-linear and multivariable model that performs at least as good as a linear model, when the training data lacks information.......The purpose of this paper is to develop a method to combine linear models with MLP networks. In other words to find a method to make a non-linear and multivariable model that performs at least as good as a linear model, when the training data lacks information....

  10. Linear Sigma Model Toolshed for D-brane Physics

    Energy Technology Data Exchange (ETDEWEB)

    Hellerman, Simeon

    2001-08-23

    Building on earlier work, we construct linear sigma models for strings on curved spaces in the presence of branes. Our models include an extremely general class of brane-worldvolume gauge field configurations. We explain in an accessible manner the mathematical ideas which suggest appropriate worldsheet interactions for generating a given open string background. This construction provides an explanation for the appearance of the derived category in D-brane physic complementary to that of recent work of Douglas.

  11. 商业医疗保险损失分析:基于广义线性模型的实证研究%Risk Factors of Losses of Commercial Medical Insurance: An Empirical Analysis Using Generalized Linear Models

    Institute of Scientific and Technical Information of China (English)

    仇春涓; 陈滔

    2012-01-01

    本文使用广义线性模型对商业医疗保险损失进行建模,并用某商业保险公司的医疗保险赔付数据进行了实证检验,结果表明,在影响医疗保险损失的诸多因素中,住院天数、医院级别、地区、保障档次等都是显著的因素,而性别和小于60岁以下年龄段内年龄则并不是显著因素,这些结论给医疗保险的经营和风险控制带来实际的意义.%The risk factors of commercial medical insurance losses are investigated in this paper. We conduct an empirical analysis by fitting the Gamma generalized linear model to a commercial medical insurance's claims data. The result indicates that among the many candidate risk factors of medical insurance losses, the days of hospital stay, the hospital levels, the area where the insurance business is applied and the insurance level are significant. On the contrary, the gender and age are insignificant. Finally, some suggestions are presented, which we believe to be helpful for future medical insurance's operations and management.

  12. 广义线性模型拟似然估计的弱相合性%Weak Consistency of Quasi-Maximum Likelihood Estimates in Generalized Linear Models

    Institute of Scientific and Technical Information of China (English)

    张戈; 吴黎军

    2013-01-01

    研究了广义线性模型在非典则联结情形下的拟似然方程Ln(β)=∑XiH(X’iβ)Λ-1(X’iβ)(yi-h(X'iβ))=0的解(β)n在一定条件下的弱相合性,证明了收敛速度i=1(β)n-(β)0≠Op(λn-1/2)以及拟似然估计的弱相合性的必要条件是:当n→∞时,S-1n→0.%In this paper, we study the solution β^n of quasi-maximum likelihood equation Ln(β) = ∑i=1n XiH(X'iβ)Λ-1(X'iβ) (yi -h(X'iβ ) = 0 for generalized linear models. Under the assumption of an unnatural link function and other some mild conditions, we prove the convergence rate β^n - β0 ≠ op(Λn-1/2) and necessary conditions is when n→∞ , we have S-1n→0.

  13. Comparison between generalized linear modelling and additive Bayesian network; identification of factors associated with the incidence of antibodies against Leptospira interrogans sv Pomona in meat workers in New Zealand.

    Science.gov (United States)

    Pittavino, M; Dreyfus, A; Heuer, C; Benschop, J; Wilson, P; Collins-Emerson, J; Torgerson, P R; Furrer, R

    2017-09-01

    Additive Bayesian Network (ABN) is a graphical model which extends Generalized Linear Modelling (GLM) to multiple dependent variables. The present study compares results from GLM with those from ABN analysis used to identify factors associated with Leptospira interrogans sv Pomona (Pomona) infection by exploring the advantages and disadvantages of these two methodologies, to corroborate inferences informing health and safety measures at abattoirs in New Zealand (NZ). In a cohort study in four sheep slaughtering abattoirs in NZ, sera were collected twice a year from 384 meat workers and tested by Microscopic Agglutination with a 91% sensitivity and 94% specificity for Pomona. The study primarily addressed the effect of work position, personal protective equipment (PPE) and non-work related exposures such as hunting on a new infection with Pomona. Significantly associated with Pomona were "Work position" and two "Abattoirs" (GLM), and "Work position" (ABN). The odds of Pomona infection (OR, [95% CI]) was highest at stunning and hide removal (ABN 41.0, [6.9-1044.2]; GLM 57.0, [6.9-473.3]), followed by removal of intestines, bladder, and kidneys (ABN 30.7, [4.9-788.4]; GLM 33.8, [4.2-271.1]). Wearing a facemask, glasses or gloves (PPE) did not result as a protective factor in GLM or ABN. The odds of Pomona infection was highest at stunning and hide removal. PPE did not show any indication of being protective in GLM or ABN. In ABN all relationships between variables are modelled; hence it has an advantage over GLM due to its capacity to capture the natural complexity of data more effectively. Copyright © 2017 The Authors. Published by Elsevier B.V. All rights reserved.

  14. [From clinical judgment to linear regression model.

    Science.gov (United States)

    Palacios-Cruz, Lino; Pérez, Marcela; Rivas-Ruiz, Rodolfo; Talavera, Juan O

    2013-01-01

    When we think about mathematical models, such as linear regression model, we think that these terms are only used by those engaged in research, a notion that is far from the truth. Legendre described the first mathematical model in 1805, and Galton introduced the formal term in 1886. Linear regression is one of the most commonly used regression models in clinical practice. It is useful to predict or show the relationship between two or more variables as long as the dependent variable is quantitative and has normal distribution. Stated in another way, the regression is used to predict a measure based on the knowledge of at least one other variable. Linear regression has as it's first objective to determine the slope or inclination of the regression line: Y = a + bx, where "a" is the intercept or regression constant and it is equivalent to "Y" value when "X" equals 0 and "b" (also called slope) indicates the increase or decrease that occurs when the variable "x" increases or decreases in one unit. In the regression line, "b" is called regression coefficient. The coefficient of determination (R(2)) indicates the importance of independent variables in the outcome.

  15. Synaptic dynamics: linear model and adaptation algorithm.

    Science.gov (United States)

    Yousefi, Ali; Dibazar, Alireza A; Berger, Theodore W

    2014-08-01

    In this research, temporal processing in brain neural circuitries is addressed by a dynamic model of synaptic connections in which the synapse model accounts for both pre- and post-synaptic processes determining its temporal dynamics and strength. Neurons, which are excited by the post-synaptic potentials of hundred of the synapses, build the computational engine capable of processing dynamic neural stimuli. Temporal dynamics in neural models with dynamic synapses will be analyzed, and learning algorithms for synaptic adaptation of neural networks with hundreds of synaptic connections are proposed. The paper starts by introducing a linear approximate model for the temporal dynamics of synaptic transmission. The proposed linear model substantially simplifies the analysis and training of spiking neural networks. Furthermore, it is capable of replicating the synaptic response of the non-linear facilitation-depression model with an accuracy better than 92.5%. In the second part of the paper, a supervised spike-in-spike-out learning rule for synaptic adaptation in dynamic synapse neural networks (DSNN) is proposed. The proposed learning rule is a biologically plausible process, and it is capable of simultaneously adjusting both pre- and post-synaptic components of individual synapses. The last section of the paper starts with presenting the rigorous analysis of the learning algorithm in a system identification task with hundreds of synaptic connections which confirms the learning algorithm's accuracy, repeatability and scalability. The DSNN is utilized to predict the spiking activity of cortical neurons and pattern recognition tasks. The DSNN model is demonstrated to be a generative model capable of producing different cortical neuron spiking patterns and CA1 Pyramidal neurons recordings. A single-layer DSNN classifier on a benchmark pattern recognition task outperforms a 2-Layer Neural Network and GMM classifiers while having fewer numbers of free parameters and

  16. GENERALIZED RICCATI TRANSFORMATION AND OSCILLATION FOR LINEAR DIFFERENTIAL EQUATIONS WITH DAMPING

    Institute of Scientific and Technical Information of China (English)

    ZhengZhaowen; LiuJingzhao

    2005-01-01

    Using generalized Riccati transformation, some new oscillation criteria for damped linear differential equations are established. These results improve and generalize some known oscillation criteria due to A.Wintner [8], I.V.Kamenev [10] for the undamped linear differential equations, and Sobol [3], J.S.W.Wong [1] for the damped linear differential equations.

  17. Generalized (,,-Pairs for Uncertain Linear Infinite-Dimensional Systems

    Directory of Open Access Journals (Sweden)

    Naohisa Otsuka

    2009-01-01

    Full Text Available We introduce the concept of generalized (,,-pairs which is related to generalized (,-invariant subspaces and generalized (,-invariant subspaces for infinite-dimensional systems. As an application the parameter-insensitive disturbance-rejection problem with dynamic compensator is formulated and its solvability conditions are presented. Further, an illustrative example is also examined.

  18. Connections between Generalizing and Justifying: Students' Reasoning with Linear Relationships

    Science.gov (United States)

    Ellis, Amy B.

    2007-01-01

    Research investigating algebra students' abilities to generalize and justify suggests that they experience difficulty in creating and using appropriate generalizations and proofs. Although the field has documented students' errors, less is known about what students do understand to be general and convincing. This study examines the ways in which…

  19. Rethinking the Lintnerian Linear Valuation Model

    Directory of Open Access Journals (Sweden)

    Shih-Cheng Lee

    2014-09-01

    Full Text Available This paper develops and tests a new valuation model. Callen and Morel (2000 apply the Lintner (1956 dividend model to the famous Ohlson (1995 valuation model and develop the Lintnerian linear accounting valuation model (henceforth, the CM model. However, Bauer and Bhattacharyya (2007 suggest that the Lintner dividend model does not fit firm dividend policy behaviour appropriately and decide to construct another dividend policy process. This study applies their dividend model to construct a new valuation model, which performs better than the original Ohlson and CM models empirically. Applying the Engle and Granger (1987 cointegration concepts, we examine the performance of the three models for the 1,564 firm-year panel data of US companies from 1973 to 2006. Our findings indicate that all tested variables are stationary after the first order difference process and that all three models exhibit long-run equilibrium relations among equity price and explanatory variables. However, our model has the highest cointegration ratio, which is almost 100 percent of sample firms. Hence, our model is more suitable to evaluate the equity value and provides improvement for the previous accounting valuation models.

  20. Data perturbation analysis of a linear model

    Institute of Scientific and Technical Information of China (English)

    2000-01-01

    The linear model features were carefully studied in the cases of data perturbation and mean shift perturbation.Some important features were also proved mathematically. The results show that the mean shift perturbation is equivalentto the data perturbation, that is, adding a parameter to an observation equation means that this set of data is deleted fromthe data set. The estimate of this parameter is its predicted residual in fact

  1. A Concise Spectrum Model for General Bistatic SAR Using Linear compensation function%基于线性补偿函数的机载双基 SAR 二维频谱研究

    Institute of Scientific and Technical Information of China (English)

    黄欢

    2014-01-01

    简洁的二维频谱解析式模型是研究任意构型的机载双基 SAR 成像算法的基础。本文提出一种适用于任意构型的机载双基 SAR 二维频谱解析表达式,它是通过利用曲线拟合和驻定相位定理得到的。首先,采用泰勒级数定理将机载双基 SAR 的斜距史函数等效为双曲线和线性误差补偿函数的复合函数。接下来,利用驻定相位定理得到最终的二维频谱表达式。对于机载双基 SAR,上述二维频谱模型是精确且简洁的。最后,通过大量的仿真结果验证了上述二维频谱模型的有效性。%A concise two-dimensional frequency spectrum analytic model is the basis of general Airplane-Airplane Bistatic SAR(GAA-BiSAR)imaging algorithm. In this paper,it presents an analytic expression of frequency spectrum for general Airborne-Airborne Bistatic SAR(GAA-BiSAR) derived by utilizing the curve fitting approach and the principle of stationary phase(POSP). Firstly, the overall slant range history of GAA-BiSAR is fitted into a hyperbolic function with linear compensation function based on the Taylor formula. Then,the POSP is performed to obtain the spectrum expression. The proposed spectrum model is concise and accurate for the GAA-BiSAR. Finally,simulation results with GAA-BiSARdemonstrate the validity of the proposed spectrum model.

  2. From spiking neuron models to linear-nonlinear models.

    Directory of Open Access Journals (Sweden)

    Srdjan Ostojic

    Full Text Available Neurons transform time-varying inputs into action potentials emitted stochastically at a time dependent rate. The mapping from current input to output firing rate is often represented with the help of phenomenological models such as the linear-nonlinear (LN cascade, in which the output firing rate is estimated by applying to the input successively a linear temporal filter and a static non-linear transformation. These simplified models leave out the biophysical details of action potential generation. It is not a priori clear to which extent the input-output mapping of biophysically more realistic, spiking neuron models can be reduced to a simple linear-nonlinear cascade. Here we investigate this question for the leaky integrate-and-fire (LIF, exponential integrate-and-fire (EIF and conductance-based Wang-Buzsáki models in presence of background synaptic activity. We exploit available analytic results for these models to determine the corresponding linear filter and static non-linearity in a parameter-free form. We show that the obtained functions are identical to the linear filter and static non-linearity determined using standard reverse correlation analysis. We then quantitatively compare the output of the corresponding linear-nonlinear cascade with numerical simulations of spiking neurons, systematically varying the parameters of input signal and background noise. We find that the LN cascade provides accurate estimates of the firing rates of spiking neurons in most of parameter space. For the EIF and Wang-Buzsáki models, we show that the LN cascade can be reduced to a firing rate model, the timescale of which we determine analytically. Finally we introduce an adaptive timescale rate model in which the timescale of the linear filter depends on the instantaneous firing rate. This model leads to highly accurate estimates of instantaneous firing rates.

  3. A General Linear Method for Equating with Small Samples

    Science.gov (United States)

    Albano, Anthony D.

    2015-01-01

    Research on equating with small samples has shown that methods with stronger assumptions and fewer statistical estimates can lead to decreased error in the estimated equating function. This article introduces a new approach to linear observed-score equating, one which provides flexible control over how form difficulty is assumed versus estimated…

  4. B-737 Linear Autoland Simulink Model

    Science.gov (United States)

    Belcastro, Celeste (Technical Monitor); Hogge, Edward F.

    2004-01-01

    The Linear Autoland Simulink model was created to be a modular test environment for testing of control system components in commercial aircraft. The input variables, physical laws, and referenced frames used are summarized. The state space theory underlying the model is surveyed and the location of the control actuators described. The equations used to realize the Dryden gust model to simulate winds and gusts are derived. A description of the pseudo-random number generation method used in the wind gust model is included. The longitudinal autopilot, lateral autopilot, automatic throttle autopilot, engine model and automatic trim devices are considered as subsystems. The experience in converting the Airlabs FORTRAN aircraft control system simulation to a graphical simulation tool (Matlab/Simulink) is described.

  5. Method of model checking based on linear weighted generalized list%基于线性带权值的广义表的模型检验方法

    Institute of Scientific and Technical Information of China (English)

    刘恩军

    2008-01-01

    提出了一个线性带权值的广义表(Linear Weighted Generalized List,LWGL)模型,同时给出了LWGL加法和乘法、析取和合取运算规则,实现了基于LWGL的高层次模型检验方法.实验结果表明LWGL模型对高层次模型检验是有效的.

  6. Linearizability of Nonlinear Third-Order Ordinary Differential Equations by Using a Generalized Linearizing Transformation

    OpenAIRE

    Thailert, E.; Suksern, S.

    2014-01-01

    We discuss the linearization problem of third-order ordinary differential equation under the generalized linearizing transformation. We identify the form of the linearizable equations and the conditions which allow the third-order ordinary differential equation to be transformed into the simplest linear equation. We also illustrate how to construct the generalized linearizing transformation. Some examples of linearizable equation are provided to demonstrate our procedure.

  7. Generalized linear IgA dermatosis with palmar involvement

    OpenAIRE

    Norris, Ivy N; Haeberle, M Tye; Callen, Jeffrey P.; Malone, Janine C

    2015-01-01

    Linear IgA bullous dermatosis (LABD) is a sub-epidermal blistering disorder characterized by deposition of IgA along the basement membrane zone (BMZ) as detected by immunofluorescence microscopy. The diagnosis is made by clinicopathologic correlation with immunofluorescence confirmation. Differentiation from other bullous dermatoses is important because therapeutic measures differ. Prompt initiation of the appropriate therapies can have a major impact on outcomes. We present three cases with ...

  8. Generalizing a categorization of students' interpretations of linear kinematics graphs

    Science.gov (United States)

    Bollen, Laurens; De Cock, Mieke; Zuza, Kristina; Guisasola, Jenaro; van Kampen, Paul

    2016-06-01

    We have investigated whether and how a categorization of responses to questions on linear distance-time graphs, based on a study of Irish students enrolled in an algebra-based course, could be adopted and adapted to responses from students enrolled in calculus-based physics courses at universities in Flanders, Belgium (KU Leuven) and the Basque Country, Spain (University of the Basque Country). We discuss how we adapted the categorization to accommodate a much more diverse student cohort and explain how the prior knowledge of students may account for many differences in the prevalence of approaches and success rates. Although calculus-based physics students make fewer mistakes than algebra-based physics students, they encounter similar difficulties that are often related to incorrectly dividing two coordinates. We verified that a qualitative understanding of kinematics is an important but not sufficient condition for students to determine a correct value for the speed. When comparing responses to questions on linear distance-time graphs with responses to isomorphic questions on linear water level versus time graphs, we observed that the context of a question influences the approach students use. Neither qualitative understanding nor an ability to find the slope of a context-free graph proved to be a reliable predictor for the approach students use when they determine the instantaneous speed.

  9. Exact linear modeling using Ore algebras

    CERN Document Server

    Schindelar, Kristina; Zerz, Eva

    2010-01-01

    Linear exact modeling is a problem coming from system identification: Given a set of observed trajectories, the goal is find a model (usually, a system of partial differential and/or difference equations) that explains the data as precisely as possible. The case of operators with constant coefficients is well studied and known in the systems theoretic literature, whereas the operators with varying coefficients were addressed only recently. This question can be tackled either using Gr\\"obner bases for modules over Ore algebras or by following the ideas from differential algebra and computing in commutative rings. In this paper, we present algorithmic methods to compute "most powerful unfalsified models" (MPUM) and their counterparts with variable coefficients (VMPUM) for polynomial and polynomial-exponential signals. We also study the structural properties of the resulting models, discuss computer algebraic techniques behind algorithms and provide several examples.

  10. When to Use Hierarchical Linear Modeling

    Directory of Open Access Journals (Sweden)

    Veronika Huta

    2014-04-01

    Full Text Available Previous publications on hierarchical linear modeling (HLM have provided guidance on how to perform the analysis, yet there is relatively little information on two questions that arise even before analysis: Does HLM apply to one’s data and research question? And if it does apply, how does one choose between HLM and other methods sometimes used in these circumstances, including multiple regression, repeated-measures or mixed ANOVA, and structural equation modeling or path analysis? The purpose of this tutorial is to briefly introduce HLM and then to review some of the considerations that are helpful in answering these questions, including the nature of the data, the model to be tested, and the information desired on the output. Some examples of how the same analysis could be performed in HLM, repeated-measures or mixed ANOVA, and structural equation modeling or path analysis are also provided. .

  11. Bayesian Discovery of Linear Acyclic Causal Models

    CERN Document Server

    Hoyer, Patrik O

    2012-01-01

    Methods for automated discovery of causal relationships from non-interventional data have received much attention recently. A widely used and well understood model family is given by linear acyclic causal models (recursive structural equation models). For Gaussian data both constraint-based methods (Spirtes et al., 1993; Pearl, 2000) (which output a single equivalence class) and Bayesian score-based methods (Geiger and Heckerman, 1994) (which assign relative scores to the equivalence classes) are available. On the contrary, all current methods able to utilize non-Gaussianity in the data (Shimizu et al., 2006; Hoyer et al., 2008) always return only a single graph or a single equivalence class, and so are fundamentally unable to express the degree of certainty attached to that output. In this paper we develop a Bayesian score-based approach able to take advantage of non-Gaussianity when estimating linear acyclic causal models, and we empirically demonstrate that, at least on very modest size networks, its accur...

  12. General job stress: a unidimensional measure and its non-linear relations with outcome variables.

    Science.gov (United States)

    Yankelevich, Maya; Broadfoot, Alison; Gillespie, Jennifer Z; Gillespie, Michael A; Guidroz, Ashley

    2012-04-01

    This article aims to examine the non-linear relations between a general measure of job stress [Stress in General (SIG)] and two outcome variables: intentions to quit and job satisfaction. In so doing, we also re-examine the factor structure of the SIG and determine that, as a two-factor scale, it obscures non-linear relations with outcomes. Thus, in this research, we not only test for non-linear relations between stress and outcome variables but also present an updated version of the SIG scale. Using two distinct samples of working adults (sample 1, N = 589; sample 2, N = 4322), results indicate that a more parsimonious eight-item SIG has better model-data fit than the 15-item two-factor SIG and that the eight-item SIG has non-linear relations with job satisfaction and intentions to quit. Specifically, the revised SIG has an inverted curvilinear J-shaped relation with job satisfaction such that job satisfaction drops precipitously after a certain level of stress; the SIG has a J-shaped curvilinear relation with intentions to quit such that turnover intentions increase exponentially after a certain level of stress.

  13. Generalized linear IgA dermatosis with palmar involvement.

    Science.gov (United States)

    Norris, Ivy N; Haeberle, M Tye; Callen, Jeffrey P; Malone, Janine C

    2015-09-17

    Linear IgA bullous dermatosis (LABD) is a sub-epidermal blistering disorder characterized by deposition of IgA along the basement membrane zone (BMZ) as detected by immunofluorescence microscopy. The diagnosis is made by clinicopathologic correlation with immunofluorescence confirmation. Differentiation from other bullous dermatoses is important because therapeutic measures differ. Prompt initiation of the appropriate therapies can have a major impact on outcomes. We present three cases with prominent palmar involvement to alert the clinician of this potential physical exam finding and to consider LABD in the right context.

  14. Information inefficiency in a random linear economy model

    CERN Document Server

    Jerico, Joao Pedro

    2016-01-01

    We study the effects of introducing information inefficiency in a model for a random linear economy with a representative consumer. This is done by considering statistical, instead of classical, economic general equilibria. Employing two different approaches we show that inefficiency increases the consumption set of a consumer but decreases her expected utility. In this scenario economic activity grows while welfare shrinks, that is the opposite of the behavior obtained by considering a rational consumer.

  15. Running vacuum cosmological models: linear scalar perturbations

    Science.gov (United States)

    Perico, E. L. D.; Tamayo, D. A.

    2017-08-01

    In cosmology, phenomenologically motivated expressions for running vacuum are commonly parameterized as linear functions typically denoted by Λ(H2) or Λ(R). Such models assume an equation of state for the vacuum given by bar PΛ = - bar rhoΛ, relating its background pressure bar PΛ with its mean energy density bar rhoΛ ≡ Λ/8πG. This equation of state suggests that the vacuum dynamics is due to an interaction with the matter content of the universe. Most of the approaches studying the observational impact of these models only consider the interaction between the vacuum and the transient dominant matter component of the universe. We extend such models by assuming that the running vacuum is the sum of independent contributions, namely bar rhoΛ = Σibar rhoΛi. Each Λ i vacuum component is associated and interacting with one of the i matter components in both the background and perturbation levels. We derive the evolution equations for the linear scalar vacuum and matter perturbations in those two scenarios, and identify the running vacuum imprints on the cosmic microwave background anisotropies as well as on the matter power spectrum. In the Λ(H2) scenario the vacuum is coupled with every matter component, whereas the Λ(R) description only leads to a coupling between vacuum and non-relativistic matter, producing different effects on the matter power spectrum.

  16. Linear and non-linear heart rate metrics for the assessment of anaesthetists' workload during general anaesthesia.

    Science.gov (United States)

    Martin, J; Schneider, F; Kowalewskij, A; Jordan, D; Hapfelmeier, A; Kochs, E F; Wagner, K J; Schulz, C M

    2016-12-01

    Excessive workload may impact the anaesthetists' ability to adequately process information during clinical practice in the operation room and may result in inaccurate situational awareness and performance. This exploratory study investigated heart rate (HR), linear and non-linear heart rate variability (HRV) metrics and subjective ratings scales for the assessment of workload associated with the anaesthesia stages induction, maintenance and emergence. HR and HRV metrics were calculated based on five min segments from each of the three anaesthesia stages. The area under the receiver operating characteristics curve (AUC) of the investigated metrics was calculated to assess their ability to discriminate between the stages of anaesthesia. Additionally, a multiparametric approach based on logistic regression models was performed to further evaluate whether linear or non-linear heart rate metrics are suitable for the assessment of workload. Mean HR and several linear and non-linear HRV metrics including subjective workload ratings differed significantly between stages of anaesthesia. Permutation Entropy (PeEn, AUC=0.828) and mean HR (AUC=0.826) discriminated best between the anaesthesia stages induction and maintenance. In the multiparametric approach using logistic regression models, the model based on non-linear heart rate metrics provided a higher AUC compared with the models based on linear metrics. In this exploratory study based on short ECG segment analysis, PeEn and HR seem to be promising to separate workload levels between different stages of anaesthesia. The multiparametric analysis of the regression models favours non-linear heart rate metrics over linear metrics. © The Author 2016. Published by Oxford University Press on behalf of the British Journal of Anaesthesia. All rights reserved. For Permissions, please email: journals.permissions@oup.com.

  17. CP Violation in the Linear Sigma Model

    CERN Document Server

    Mizher, Ana Júlia

    2009-01-01

    Motivated by the possibility of the formation of CP-odd domains in heavy ion collisions, we investigate the effects of CP violation on the chiral transition within the linear sigma model with two flavors of quarks. We also study how the CP-odd system is affected by the presence of a strong magnetic field, that is presumably generated in a non-central heavy ion collision. We find that both ingredients play an important role, influencing drastically the nature of the phase transition and the critical temperature.

  18. CP Violation in the Linear Sigma Model

    OpenAIRE

    Mizher, Ana Júlia; Fraga, Eduardo S.

    2008-01-01

    Motivated by the possibility of the formation of CP-odd domains in heavy ion collisions, we investigate the effects of CP violation on the chiral transition within the linear sigma model with two flavors of quarks. We also study how the CP-odd system is affected by the presence of a strong magnetic field, that is presumably generated in a non-central heavy ion collision. We find that both ingredients play an important role, influencing drastically the nature of the phase transition and the cr...

  19. CP Violation in the Linear Sigma Model

    Energy Technology Data Exchange (ETDEWEB)

    Mizher, Ana Julia; Fraga, Eduardo S. [Instituto de Fisica, Universidade Federal do Rio de Janeiro, Caixa Postal 68528, Rio de Janeiro, RJ 21941-972 (Brazil)

    2009-04-01

    Motivated by the possibility of the formation of CP-odd domains in heavy ion collisions, we investigate the effects of CP violation on the chiral transition within the linear sigma model with two flavors of quarks. We also study how the CP-odd system is affected by the presence of a strong magnetic field, that is presumably generated in a non-central heavy ion collision. We find that both ingredients play an important role, influencing drastically the nature of the phase transition and the critical temperature.

  20. Linear Amplifier Model for Optomechanical Systems

    CERN Document Server

    Botter, Thierry; Brahms, Nathan; Schreppler, Sydney; Stamper-Kurn, Dan M

    2011-01-01

    We model optomechanical systems as linear optical amplifiers. This provides a unified treatment of diverse optomechanical phenomena. We emphasize, in particular, the relationship between ponderomotive squeezing and optomechanically induced transparency, two foci of current research. We characterize the amplifier response to quantum and deliberately applied fluctuations, both optical and mechanical. Further, we apply these results to establish quantum limits on external force sensing both on and off cavity resonance. We find that the maximum sensitivity attained on resonance constitutes an absolute upper limit, not surpassed when detuning off cavity resonance. The theory can be extended to a two-sided cavity with losses and limited detection efficiency.

  1. Piecewise Linear Model-Based Image Enhancement

    Directory of Open Access Journals (Sweden)

    Fabrizio Russo

    2004-09-01

    Full Text Available A novel technique for the sharpening of noisy images is presented. The proposed enhancement system adopts a simple piecewise linear (PWL function in order to sharpen the image edges and to reduce the noise. Such effects can easily be controlled by varying two parameters only. The noise sensitivity of the operator is further decreased by means of an additional filtering step, which resorts to a nonlinear model too. Results of computer simulations show that the proposed sharpening system is simple and effective. The application of the method to contrast enhancement of color images is also discussed.

  2. An introduction to hierarchical linear modeling

    Directory of Open Access Journals (Sweden)

    Heather Woltman

    2012-02-01

    Full Text Available This tutorial aims to introduce Hierarchical Linear Modeling (HLM. A simple explanation of HLM is provided that describes when to use this statistical technique and identifies key factors to consider before conducting this analysis. The first section of the tutorial defines HLM, clarifies its purpose, and states its advantages. The second section explains the mathematical theory, equations, and conditions underlying HLM. HLM hypothesis testing is performed in the third section. Finally, the fourth section provides a practical example of running HLM, with which readers can follow along. Throughout this tutorial, emphasis is placed on providing a straightforward overview of the basic principles of HLM.

  3. Linear Parametric Model Checking of Timed Automata

    DEFF Research Database (Denmark)

    Hune, Tohmas Seidelin; Romijn, Judi; Stoelinga, Mariëlle

    2001-01-01

    of a subclass of parametric timed automata (L/U automata), for which the emptiness problem is decidable, contrary to the full class where it is know to be undecidable. Also we present a number of lemmas enabling the verication eort to be reduced for L/U automata in some cases. We illustrate our approach......We present an extension of the model checker Uppaal capable of synthesize linear parameter constraints for the correctness of parametric timed automata. The symbolic representation of the (parametric) state-space is shown to be correct. A second contribution of this paper is the identication...

  4. F-theory and linear sigma models

    CERN Document Server

    Bershadsky, M; Greene, Brian R; Johansen, A; Lazaroiu, C I

    1998-01-01

    We present an explicit method for translating between the linear sigma model and the spectral cover description of SU(r) stable bundles over an elliptically fibered Calabi-Yau manifold. We use this to investigate the 4-dimensional duality between (0,2) heterotic and F-theory compactifications. We indirectly find that much interesting heterotic information must be contained in the `spectral bundle' and in its dual description as a gauge theory on multiple F-theory 7-branes. A by-product of these efforts is a method for analyzing semistability and the splitting type of vector bundles over an elliptic curve given as the sheaf cohomology of a monad.

  5. Extending Local Canonical Correlation Analysis to Handle General Linear Contrasts for fMRI Data

    Directory of Open Access Journals (Sweden)

    Mingwu Jin

    2012-01-01

    Full Text Available Local canonical correlation analysis (CCA is a multivariate method that has been proposed to more accurately determine activation patterns in fMRI data. In its conventional formulation, CCA has several drawbacks that limit its usefulness in fMRI. A major drawback is that, unlike the general linear model (GLM, a test of general linear contrasts of the temporal regressors has not been incorporated into the CCA formalism. To overcome this drawback, a novel directional test statistic was derived using the equivalence of multivariate multiple regression (MVMR and CCA. This extension will allow CCA to be used for inference of general linear contrasts in more complicated fMRI designs without reparameterization of the design matrix and without reestimating the CCA solutions for each particular contrast of interest. With the proper constraints on the spatial coefficients of CCA, this test statistic can yield a more powerful test on the inference of evoked brain regional activations from noisy fMRI data than the conventional t-test in the GLM. The quantitative results from simulated and pseudoreal data and activation maps from fMRI data were used to demonstrate the advantage of this novel test statistic.

  6. Linear models for joint association and linkage QTL mapping

    Directory of Open Access Journals (Sweden)

    Fernando Rohan L

    2009-09-01

    Full Text Available Abstract Background Populational linkage disequilibrium and within-family linkage are commonly used for QTL mapping and marker assisted selection. The combination of both results in more robust and accurate locations of the QTL, but models proposed so far have been either single marker, complex in practice or well fit to a particular family structure. Results We herein present linear model theory to come up with additive effects of the QTL alleles in any member of a general pedigree, conditional to observed markers and pedigree, accounting for possible linkage disequilibrium among QTLs and markers. The model is based on association analysis in the founders; further, the additive effect of the QTLs transmitted to the descendants is a weighted (by the probabilities of transmission average of the substitution effects of founders' haplotypes. The model allows for non-complete linkage disequilibrium QTL-markers in the founders. Two submodels are presented: a simple and easy to implement Haley-Knott type regression for half-sib families, and a general mixed (variance component model for general pedigrees. The model can use information from all markers. The performance of the regression method is compared by simulation with a more complex IBD method by Meuwissen and Goddard. Numerical examples are provided. Conclusion The linear model theory provides a useful framework for QTL mapping with dense marker maps. Results show similar accuracies but a bias of the IBD method towards the center of the region. Computations for the linear regression model are extremely simple, in contrast with IBD methods. Extensions of the model to genomic selection and multi-QTL mapping are straightforward.

  7. Parallel Computing of Ocean General Circulation Model

    Institute of Scientific and Technical Information of China (English)

    2001-01-01

    This paper discusses the parallel computing of the thirdgeneration Ocea n General Circulation Model (OGCM) from the State Key Laboratory of Numerical Mo deling for Atmospheric Science and Geophysical Fluid Dynamics(LASG),Institute of Atmosphere Physics(IAP). Meanwhile, several optimization strategies for paralle l computing of OGCM (POGCM) on Scalable Shared Memory Multiprocessor (S2MP) are presented. Using Message Passing Interface (MPI), we obtain super linear speedup on SGI Origin 2000 for parallel OGCM(POGCM) after optimization.

  8. A general algorithm for computing distance transforms in linear time

    NARCIS (Netherlands)

    Meijster, A.; Roerdink, J.B.T.M.; Hesselink, W.H.; Goutsias, J; Vincent, L; Bloomberg, DS

    2000-01-01

    A new general algorithm fur computing distance transforms of digital images is presented. The algorithm consists of two phases. Both phases consist of two scans, a forward and a backward scan. The first phase scans the image column-wise, while the second phase scans the image row-wise. Since the com

  9. A general algorithm for computing distance transforms in linear time

    NARCIS (Netherlands)

    Meijster, A.; Roerdink, J.B.T.M.; Hesselink, W.H.; Goutsias, J; Vincent, L; Bloomberg, DS

    2000-01-01

    A new general algorithm fur computing distance transforms of digital images is presented. The algorithm consists of two phases. Both phases consist of two scans, a forward and a backward scan. The first phase scans the image column-wise, while the second phase scans the image row-wise. Since the

  10. On the relation between the linear factor model and the latent profile model

    NARCIS (Netherlands)

    Halpin, P.F.; Dolan, C.V.; Grasman, R.P.P.P.; de Boeck, P.

    2011-01-01

    The relationship between linear factor models and latent profile models is addressed within the context of maximum likelihood estimation based on the joint distribution of the manifest variables. Although the two models are well known to imply equivalent covariance decompositions, in general they do

  11. On the Relation between the Linear Factor Model and the Latent Profile Model

    Science.gov (United States)

    Halpin, Peter F.; Dolan, Conor V.; Grasman, Raoul P. P. P.; De Boeck, Paul

    2011-01-01

    The relationship between linear factor models and latent profile models is addressed within the context of maximum likelihood estimation based on the joint distribution of the manifest variables. Although the two models are well known to imply equivalent covariance decompositions, in general they do not yield equivalent estimates of the…

  12. Ira Remsen, saccharin, and the linear model.

    Science.gov (United States)

    Warner, Deborah J

    2008-03-01

    While working in the chemistry laboratory at Johns Hopkins University, Constantin Fahlberg oxidized the 'ortho-sulfamide of benzoic acid' and, by chance, found the result to be incredibly sweet. Several years later, now working on his own, he termed this stuff saccharin, developed methods of making it in quantity, obtained patents on these methods, and went into production. As the industrial and scientific value of saccharin became apparent, Ira Remsen pointed out that the initial work had been done in his laboratory and at his suggestion. The ensuing argument, carried out in the courts of law and public opinion, illustrates the importance of the linear model to scientists who staked their identities on the model of disinterested research but who also craved credit for important practical results.

  13. Freeway Crash Prediction Based on Generalized Linear Regression Models%基于广义线性模型的高速公路交通事故预测

    Institute of Scientific and Technical Information of China (English)

    王迎; 周燕

    2015-01-01

    In order to analysis the impact of traffic state parameters to the freeway crash,a freeway crash prediction model was proposed based on the generalized linear regression models (GLM).Using the traffic flow data and crash data from I-8E freeway in the United States,Negative binomial (NB)pre-diction model and Poisson prediction model based on the real-time traffic flow condition was developed, and the elasticity coefficient calculation method used to confirm the prominent traffic induction parameter was proposed.The results show that the freeway crash can be fitted by the GLM,and the predication ac-curacy of NB model is higher than that of Poisson prediction model.The parameters of traffic volume, share ratio and speed standard deviation have significant affected freeway crashes,and they are in a posi-tive relationship with freeway crash.Traffic volume is the most induction factor that influences freeway crash and an increase of 1 % in traffic volume leads to an increase of 5.8% in freeway crash.%为分析高速公路交通流状态参数对交通事故的影响,建立了基于广义线性模型的高速公路交通事故预测模型。采用美国8号州际高速公路的实时交通流数据和交通事故数据,建立了实时交通流状态下的高速公路泊松分布预测模型和负二项分布预测模型,并给出了模型变量弹性系数的计算方法,用以确定高速公路交通事故的突出诱导因素。研究结果表明:广义线性模型能够很好的拟合高速公路交通事故,并且负二项分布预测模型的预测精度高于泊松分布预测模型;交通量、占有率、大车比例和速度标准差是高速公路交通事故的显著影响参数,并且与之呈正向关系;交通量是诱导高速公路交通事故发生最突出因素,交通量增长1%,可导致交通事故增长5.8%。

  14. Category-theoretic models of linear Abadi & Plotkin Logic

    DEFF Research Database (Denmark)

    Birkedal, Lars; Møgelberg, Rasmus Ejlers; Lerchedahl Petersen, Rasmus

    2008-01-01

    This paper presents a sound and complete category-theoretic notion of models for Linear Abadi & Plotkin Logic [Birkedal et al., 2006], a logic suitable for reasoning about parametricity in combination with recursion. A subclass of these called parametric LAPL structures can be seen as an axiomati......This paper presents a sound and complete category-theoretic notion of models for Linear Abadi & Plotkin Logic [Birkedal et al., 2006], a logic suitable for reasoning about parametricity in combination with recursion. A subclass of these called parametric LAPL structures can be seen...... as an axiomatization of domain theoretic models of parametric polymorphism, and we show how to solve general (nested) recursive domain equations in these. parametric LAPL structures constitute a general notion of model of parametricity in a setting with recursion. In future papers we will demonstrate this by showing...... how many different models of parametricity and recursion give rise to parametric LAPL structures, including Simpson and Rosolini’s set theoretic models [Rosolini and Simpson, 2004], a syntactic model based on Lily [Pitts, 2000, Bierman et al., 2000] and a model based on admissible pers over...

  15. Dynamic Response of Linear Mechanical Systems Modeling, Analysis and Simulation

    CERN Document Server

    Angeles, Jorge

    2012-01-01

    Dynamic Response of Linear Mechanical Systems: Modeling, Analysis and Simulation can be utilized for a variety of courses, including junior and senior-level vibration and linear mechanical analysis courses. The author connects, by means of a rigorous, yet intuitive approach, the theory of vibration with the more general theory of systems. The book features: A seven-step modeling technique that helps structure the rather unstructured process of mechanical-system modeling A system-theoretic approach to deriving the time response of the linear mathematical models of mechanical systems The modal analysis and the time response of two-degree-of-freedom systems—the first step on the long way to the more elaborate study of multi-degree-of-freedom systems—using the Mohr circle Simple, yet powerful simulation algorithms that exploit the linearity of the system for both single- and multi-degree-of-freedom systems Examples and exercises that rely on modern computational toolboxes for both numerical and symbolic compu...

  16. Plane answers to complex questions the theory of linear models

    CERN Document Server

    Christensen, Ronald

    1987-01-01

    This book was written to rigorously illustrate the practical application of the projective approach to linear models. To some, this may seem contradictory. I contend that it is possible to be both rigorous and illustrative and that it is possible to use the projective approach in practical applications. Therefore, unlike many other books on linear models, the use of projections and sub­ spaces does not stop after the general theory. They are used wherever I could figure out how to do it. Solving normal equations and using calculus (outside of maximum likelihood theory) are anathema to me. This is because I do not believe that they contribute to the understanding of linear models. I have similar feelings about the use of side conditions. Such topics are mentioned when appropriate and thenceforward avoided like the plague. On the other side of the coin, I just as strenuously reject teaching linear models with a coordinate free approach. Although Joe Eaton assures me that the issues in complicated problems freq...

  17. Modeling hierarchical structures - Hierarchical Linear Modeling using MPlus

    CERN Document Server

    Jelonek, M

    2006-01-01

    The aim of this paper is to present the technique (and its linkage with physics) of overcoming problems connected to modeling social structures, which are typically hierarchical. Hierarchical Linear Models provide a conceptual and statistical mechanism for drawing conclusions regarding the influence of phenomena at different levels of analysis. In the social sciences it is used to analyze many problems such as educational, organizational or market dilemma. This paper introduces the logic of modeling hierarchical linear equations and estimation based on MPlus software. I present my own model to illustrate the impact of different factors on school acceptation level.

  18. Robust Linear Models for Cis-eQTL Analysis.

    Directory of Open Access Journals (Sweden)

    Mattias Rantalainen

    Full Text Available Expression Quantitative Trait Loci (eQTL analysis enables characterisation of functional genetic variation influencing expression levels of individual genes. In outbread populations, including humans, eQTLs are commonly analysed using the conventional linear model, adjusting for relevant covariates, assuming an allelic dosage model and a Gaussian error term. However, gene expression data generally have noise that induces heavy-tailed errors relative to the Gaussian distribution and often include atypical observations, or outliers. Such departures from modelling assumptions can lead to an increased rate of type II errors (false negatives, and to some extent also type I errors (false positives. Careful model checking can reduce the risk of type-I errors but often not type II errors, since it is generally too time-consuming to carefully check all models with a non-significant effect in large-scale and genome-wide studies. Here we propose the application of a robust linear model for eQTL analysis to reduce adverse effects of deviations from the assumption of Gaussian residuals. We present results from a simulation study as well as results from the analysis of real eQTL data sets. Our findings suggest that in many situations robust models have the potential to provide more reliable eQTL results compared to conventional linear models, particularly in respect to reducing type II errors due to non-Gaussian noise. Post-genomic data, such as that generated in genome-wide eQTL studies, are often noisy and frequently contain atypical observations. Robust statistical models have the potential to provide more reliable results and increased statistical power under non-Gaussian conditions. The results presented here suggest that robust models should be considered routinely alongside other commonly used methodologies for eQTL analysis.

  19. Solution and applications of a class of general linear variational inequalities

    Institute of Scientific and Technical Information of China (English)

    何炳生

    1996-01-01

    Many problems in mathematical programming can be described as a general linear variational inequality of the following form: find a vector u*, such thatSome iterative methods for solving a class of general linear variational inequalities have been presented. It is pointed out that the methods can be used to solve some practical extended programming problems.

  20. The generalization of some trellis properties of linear codes to group codes

    Institute of Scientific and Technical Information of China (English)

    KAN HaiBin; LI XueFei; SHEN Hong

    2009-01-01

    In this paper, we discuss some trellis properties for codes over a finite Abelian group, which are the generalization of the corresponding trellis properties for linear codes over a field. Also, we also inves-tigate difficulties when we try to generalize a property of a tail-biting trellis for a linear code over a field to a group code.

  1. Rayleigh-type Surface Quasimodes in General Linear Elasticity

    CERN Document Server

    Hansen, Sönke

    2010-01-01

    Rayleigh-type surface waves correspond to the characteristic variety, in the elliptic boundary region, of the displacement-to-traction map. In this paper, surface quasimodes are constructed for the reduced elastic wave equation, anisotropic in general, with traction-free boundary. Assuming a global variant of a condition of Barnett and Lothe, the construction is reduced to an eigenvalue problem for a selfadjoint scalar first order pseudo-differential operator on the boundary. The principal and the subprincipal symbol of this operator are computed. The formula for the subprincipal symbol seems to be new even in the isotropic case.

  2. Linear models in the mathematics of uncertainty

    CERN Document Server

    Mordeson, John N; Clark, Terry D; Pham, Alex; Redmond, Michael A

    2013-01-01

    The purpose of this book is to present new mathematical techniques for modeling global issues. These mathematical techniques are used to determine linear equations between a dependent variable and one or more independent variables in cases where standard techniques such as linear regression are not suitable. In this book, we examine cases where the number of data points is small (effects of nuclear warfare), where the experiment is not repeatable (the breakup of the former Soviet Union), and where the data is derived from expert opinion (how conservative is a political party). In all these cases the data  is difficult to measure and an assumption of randomness and/or statistical validity is questionable.  We apply our methods to real world issues in international relations such as  nuclear deterrence, smart power, and cooperative threat reduction. We next apply our methods to issues in comparative politics such as successful democratization, quality of life, economic freedom, political stability, and fail...

  3. Robust root clustering for linear uncertain systems using generalized Lyapunov theory

    Science.gov (United States)

    Yedavalli, R. K.

    1993-01-01

    Consideration is given to the problem of matrix root clustering in subregions of a complex plane for linear state space models with real parameter uncertainty. The nominal matrix root clustering theory of Gutman & Jury (1981) using the generalized Liapunov equation is extended to the perturbed matrix case, and bounds are derived on the perturbation to maintain root clustering inside a given region. The theory makes it possible to obtain an explicit relationship between the parameters of the root clustering region and the uncertainty range of the parameter space.

  4. Robust root clustering for linear uncertain systems using generalized Lyapunov theory

    Science.gov (United States)

    Yedavalli, R. K.

    1993-01-01

    Consideration is given to the problem of matrix root clustering in subregions of a complex plane for linear state space models with real parameter uncertainty. The nominal matrix root clustering theory of Gutman & Jury (1981) using the generalized Liapunov equation is extended to the perturbed matrix case, and bounds are derived on the perturbation to maintain root clustering inside a given region. The theory makes it possible to obtain an explicit relationship between the parameters of the root clustering region and the uncertainty range of the parameter space.

  5. Marginal linearization method in modeling on fuzzy control systems

    Institute of Scientific and Technical Information of China (English)

    2003-01-01

    Marginal linearization method in modeling on fuzzy control systems is proposed, which is to deal with the nonlinear model with variable coefficients. The method can turn a nonlinear model with variable coefficients into a linear model with variable coefficients in the way that the membership functions of the fuzzy sets in fuzzy partitions of the universes are changed from triangle waves into rectangle waves. However, the linearization models are incomplete in their forms because of their lacking some items. For solving this problem, joint approximation by using linear models is introduced. The simulation results show that marginal linearization models are of higher approximation precision than their original nonlinear models.

  6. Non-Linear Sigma Model on Conifolds

    CERN Document Server

    Parthasarathy, R

    2002-01-01

    Explicit solutions to the conifold equations with complex dimension $n=3,4$ in terms of {\\it{complex coordinates (fields)}} are employed to construct the Ricci-flat K\\"{a}hler metrics on these manifolds. The K\\"{a}hler 2-forms are found to be closed. The complex realization of these conifold metrics are used in the construction of 2-dimensional non-linear sigma model with the conifolds as target spaces. The action for the sigma model is shown to be bounded from below. By a suitable choice of the 'integration constants', arising in the solution of Ricci flatness requirement, the metric and the equations of motion are found to be {\\it{non-singular}}. As the target space is Ricci flat, the perturbative 1-loop counter terms being absent, the model becomes topological. The inherent U(1) fibre over the base of the conifolds is shown to correspond to a gauge connection in the sigma model. The same procedure is employed to construct the metric for the resolved conifold, in terms of complex coordinates and the action ...

  7. Interacting Dark Energy Models -- Scalar Linear Perturbations

    CERN Document Server

    Perico, E L D

    2016-01-01

    We extend the dark sector interacting models assuming the dark energy as the sum of independent contributions $\\rho_{\\Lambda} =\\sum_i\\rho_{\\Lambda i}$, associated with (and interacting with) each of the $i$ material species. We derive the linear scalar perturbations for two interacting dark energy scenarios, modeling its cosmic evolution and identifying their different imprints in the CMB and matter power spectrum. Our treatment was carried out for two phenomenological motivated expressions of the dark energy density, $\\rho_\\Lambda(H^2)$ and $\\rho_\\Lambda(R)$. The $\\rho_\\Lambda(H^2)$ description turned out to be a full interacting model, i.e., the dark energy interacts with everyone material species in the universe, whereas the $\\rho_\\Lambda(R)$ description only leads to interactions between dark energy and the non-relativistic matter components; which produces different imprints of the two models on the matter power spectrum. A comparison with the Planck 2015 data was made in order to constrain the free para...

  8. The left invariant metric in the general linear group

    CERN Document Server

    Andruchow, Esteban; Recht, Lazaro; Varela, Alejandro

    2011-01-01

    Left invariant metrics induced by the p-norms of the trace in the matrix algebra are studied on the general lineal group. By means of the Euler-Lagrange equations, existence and uniqueness of extremal paths for the length functional are established, and regularity properties of these extremal paths are obtained. Minimizing paths in the group are shown to have a velocity with constant singular values and multiplicity. In several special cases, these geodesic paths are computed explicitly. In particular the Riemannian geodesics, corresponding to the case p=2, are characterized as the product of two one-parameter groups. It is also shown that geodesics are one-parameter groups if and only if the initial velocity is a normal matrix. These results are further extended to the context of compact operators with p-summable spectrum, where a differential equation for the spectral projections of the velocity vector of an extremal path is obtained.

  9. 秩估计及向量广义线性模型在风险投资中应用%Application of Rank Estimation and Vector Generalized Linear Model in Risk Investment

    Institute of Scientific and Technical Information of China (English)

    王洪礼; 姬晓鹏

    2015-01-01

    从风险投资案例中整理发现内在变化规律,有助于把握投资方向和路径。以2001—2011年全球投资公司每轮平均投资数据为例,由于数据不具备正态性和方差齐次性,基于秩估计方差分析,结果表明,各年之间均值存在显著差异。假设平均投资服从伽玛分布,其形状参数和尺度参数是年份的二次函数,基于向量广义线性模型估计各参数。最后预测2015年伽玛分布形状参数为1.1959,尺度参数为5816.186。风险投资位于任何区间的概率都可以通过分布函数计算。%It’s very important to find the rule of inherence and internal relationship from the case of risk investment , then venture capital investors can see clearly of the investment trend as well as the regarding detailed information .Take, for in-stance, the data of average investment amount of all the funds in the world follows neither the normality assumption nor the homogeneity of variance .We used“analysis of variance estimation of rank” to prove the significant difference of average in-vestment by each fund among each year .Assuming the average investment follow the rule of Gamma distribution , and the form parameter and scale parameter are quadratic function of year parameter , we can estimate each parameter based on model of generalized linear vector .Finally we forecasted the form parameter of Gamma distribution of 2015 is 1.1959 , and scale parameter of Gamma distribution of 2015 is 5816.186 .The probabiting of the investment in any interval can be calcu-lated by distribution function .

  10. Max-plus-linear model-based predictive control for constrained hybrid systems:linear programming solution

    Institute of Scientific and Technical Information of China (English)

    Yuanyuan ZOU; Shaoyuan LI

    2007-01-01

    In this paper,a linear programming method is proposed to solve model predictive control for a class of hybrid systems.Firstly,using the(max,+)algebra,a typical subclass of hybrid systems called max-plus-linear(MPL)systems is obtained.And then,model predictive control(MPC)framework is extended to MPL systems.In general,the nonlinear optimization approach or extended linear complementarity problem(ELCP)were applied to solve the MPL-MPC optimization problem.A new optimization method based on canonical forms for max-min-plus-scaling(MMPS)functions (using the operations maximization,minimization,addition and scalar multiplication)with linear constraints on the inputs is presented.The proposed approach consists in solving several linear programming problems and is more efficient than nonlinear optimization.The validity of the algorithm is illustrated by an example.

  11. Modelling anisotropic fluid spheres in general relativity

    CERN Document Server

    Boonserm, Petarpa; Visser, Matt

    2015-01-01

    We argue that an arbitrary general relativistic anisotropic fluid sphere, (spherically symmetric but with transverse pressure not equal to radial pressure), can nevertheless be successfully modelled by suitable linear combinations of quite ordinary classical matter: an isotropic perfect fluid, a classical electromagnetic field, and a classical (minimally coupled) scalar field. While the most general decomposition is not unique, a preferred minimal decomposition can be constructed that is unique. We show how the classical energy conditions for the anisotropic fluid sphere can be related to energy conditions for the isotropic perfect fluid, electromagnetic field, and scalar field components of the model. Furthermore we show how this decomposition relates to the distribution of electric charge density and scalar charge density throughout the model that is used to mimic the anisotropic fluid sphere. Consequently, we can build physically reasonable matter models for almost any spherically symmetric spacetime.

  12. F-theory and linear sigma models

    Energy Technology Data Exchange (ETDEWEB)

    Bershadsky, M.; Johansen, A. [Harvard Univ., Cambridge, MA (United States). Lyman Lab. of Physics; Chiang, T.M. [Newman Laboratory of Nuclear Studies, Cornell University, Ithaca, NY 14850 (United States); Greene, B.R.; Lazaroiu, C.I. [Departments of Physics and Mathematics, Columbia University, New York, NY 10027 (United States)

    1998-09-07

    We present an explicit method for translating between the linear sigma model and the spectral cover description of SU(r) stable bundles over an elliptically fibered Calabi-Yau manifold. We use this to investigate the four-dimensional duality between (0,2) heterotic and F-theory compactifications. We indirectly find that much interesting heterotic information must be contained in the `spectral bundle` and in its dual description as a gauge theory on multiple F-theory 7-branes. A by-product of these efforts is a method for analyzing semistability and the splitting type of vector bundles over an elliptic curve given as the sheaf cohomology of a monad. (orig.) 24 refs.

  13. Distributed static linear Gaussian models using consensus.

    Science.gov (United States)

    Belanovic, Pavle; Valcarcel Macua, Sergio; Zazo, Santiago

    2012-10-01

    Algorithms for distributed agreement are a powerful means for formulating distributed versions of existing centralized algorithms. We present a toolkit for this task and show how it can be used systematically to design fully distributed algorithms for static linear Gaussian models, including principal component analysis, factor analysis, and probabilistic principal component analysis. These algorithms do not rely on a fusion center, require only low-volume local (1-hop neighborhood) communications, and are thus efficient, scalable, and robust. We show how they are also guaranteed to asymptotically converge to the same solution as the corresponding existing centralized algorithms. Finally, we illustrate the functioning of our algorithms on two examples, and examine the inherent cost-performance trade-off.

  14. Model-Checking Linear-Time Properties of Quantum Systems

    CERN Document Server

    Ying, Mingsheng; Yu, Nengkun; Feng, Yuan

    2011-01-01

    We define a formal framework for reasoning about linear-time properties of quantum systems in which quantum automata are employed in the modeling of systems and certain closed subspaces of state (Hilbert) spaces are used as the atomic propositions about the behavior of systems. We provide an algorithm for verifying invariants of quantum automata. Then automata-based model-checking technique is generalized for the verification of safety properties recognizable by reversible automata and omega-properties recognizable by reversible Buechi automata.

  15. A linear model for the dynamics of fish larvae

    Directory of Open Access Journals (Sweden)

    Noureddine Ghouali

    2004-11-01

    Full Text Available We consider a linear model for the growth and the dispersion of fish larvae of certain species. Dispersion is modeled as entailed by the combination of transport and vertical diffusion. We generalize the work of Boushaba, Arino and Boussouar [5,6] in the sense that horizontal velocities are uniform throughout the water column; but we deal with vertical component velocity and vertical diffusion depending on the space variables and on time, which was not the case in [5,6]. This new vision leads us to non-autonomous problems, the aim of this work is to show the existence, uniqueness, and positivity of solutions.

  16. Testing Linear Models for Ability Parameters in Item Response Models

    NARCIS (Netherlands)

    Glas, Cees A.W.; Hendrawan, Irene

    2005-01-01

    Methods for testing hypotheses concerning the regression parameters in linear models for the latent person parameters in item response models are presented. Three tests are outlined: A likelihood ratio test, a Lagrange multiplier test and a Wald test. The tests are derived in a marginal maximum like

  17. The Optimal Selection for Restricted Linear Models with Average Estimator

    Directory of Open Access Journals (Sweden)

    Qichang Xie

    2014-01-01

    Full Text Available The essential task of risk investment is to select an optimal tracking portfolio among various portfolios. Statistically, this process can be achieved by choosing an optimal restricted linear model. This paper develops a statistical procedure to do this, based on selecting appropriate weights for averaging approximately restricted models. The method of weighted average least squares is adopted to estimate the approximately restricted models under dependent error setting. The optimal weights are selected by minimizing a k-class generalized information criterion (k-GIC, which is an estimate of the average squared error from the model average fit. This model selection procedure is shown to be asymptotically optimal in the sense of obtaining the lowest possible average squared error. Monte Carlo simulations illustrate that the suggested method has comparable efficiency to some alternative model selection techniques.

  18. Piecewise Linear-Linear Latent Growth Mixture Models with Unknown Knots

    Science.gov (United States)

    Kohli, Nidhi; Harring, Jeffrey R.; Hancock, Gregory R.

    2013-01-01

    Latent growth curve models with piecewise functions are flexible and useful analytic models for investigating individual behaviors that exhibit distinct phases of development in observed variables. As an extension of this framework, this study considers a piecewise linear-linear latent growth mixture model (LGMM) for describing segmented change of…

  19. Assessment of Linear and Non-Linear Two-Equation Turbulence Models for Aerothermal Turbomachinery Flows

    Institute of Scientific and Technical Information of China (English)

    Pascale KULISA; Cédric DANO

    2006-01-01

    Three linear two-equation turbulence models k- ε, k- ω and k- 1 and a non-linear k- l model are used for aerodynamic and thermal turbine flow prediction. The pressure profile in the wake and the heat transfer coefficient on the blade are compared with experimental data. Good agreement is obtained with the linear k- l model. No significant modifications are observed with the non-linear model. The balance of transport equation terms in the blade wake is also presented. Linear and non-linear k- l models are evaluated to predict the threedimensional vortices characterising the turbine flows. The simulations show that the passage vortex is the main origin of the losses.

  20. Hierarchical linear regression models for conditional quantiles

    Institute of Scientific and Technical Information of China (English)

    TIAN Maozai; CHEN Gemai

    2006-01-01

    The quantile regression has several useful features and therefore is gradually developing into a comprehensive approach to the statistical analysis of linear and nonlinear response models,but it cannot deal effectively with the data with a hierarchical structure.In practice,the existence of such data hierarchies is neither accidental nor ignorable,it is a common phenomenon.To ignore this hierarchical data structure risks overlooking the importance of group effects,and may also render many of the traditional statistical analysis techniques used for studying data relationships invalid.On the other hand,the hierarchical models take a hierarchical data structure into account and have also many applications in statistics,ranging from overdispersion to constructing min-max estimators.However,the hierarchical models are virtually the mean regression,therefore,they cannot be used to characterize the entire conditional distribution of a dependent variable given high-dimensional covariates.Furthermore,the estimated coefficient vector (marginal effects)is sensitive to an outlier observation on the dependent variable.In this article,a new approach,which is based on the Gauss-Seidel iteration and taking a full advantage of the quantile regression and hierarchical models,is developed.On the theoretical front,we also consider the asymptotic properties of the new method,obtaining the simple conditions for an n1/2-convergence and an asymptotic normality.We also illustrate the use of the technique with the real educational data which is hierarchical and how the results can be explained.

  1. A general derivation of the subharmonic threshold for non-linear bubble oscillations.

    Science.gov (United States)

    Prosperetti, Andrea

    2013-06-01

    The paper describes an approximate but rather general derivation of the acoustic threshold for a subharmonic component to be possible in the sound scattered by an insonified gas bubble. The general result is illustrated with several specific models for the mechanical behavior of the surface coating of bubbles used as acoustic contrast agents. The approximate results are found to be in satisfactory agreement with fully non-linear numerical results in the literature. The amplitude of the first harmonic is also found by the same method. A fundamental feature identified by the analysis is that the subharmonic threshold can be considerably lowered with respect to that of an uncoated free bubble if the mechanical response of the coating varies rapidly in the neighborhood of certain specific values of the bubble radius, e.g., because of buckling.

  2. On linear models and parameter identifiability in experimental biological systems.

    Science.gov (United States)

    Lamberton, Timothy O; Condon, Nicholas D; Stow, Jennifer L; Hamilton, Nicholas A

    2014-10-07

    A key problem in the biological sciences is to be able to reliably estimate model parameters from experimental data. This is the well-known problem of parameter identifiability. Here, methods are developed for biologists and other modelers to design optimal experiments to ensure parameter identifiability at a structural level. The main results of the paper are to provide a general methodology for extracting parameters of linear models from an experimentally measured scalar function - the transfer function - and a framework for the identifiability analysis of complex model structures using linked models. Linked models are composed by letting the output of one model become the input to another model which is then experimentally measured. The linked model framework is shown to be applicable to designing experiments to identify the measured sub-model and recover the input from the unmeasured sub-model, even in cases that the unmeasured sub-model is not identifiable. Applications for a set of common model features are demonstrated, and the results combined in an example application to a real-world experimental system. These applications emphasize the insight into answering "where to measure" and "which experimental scheme" questions provided by both the parameter extraction methodology and the linked model framework. The aim is to demonstrate the tools' usefulness in guiding experimental design to maximize parameter information obtained, based on the model structure.

  3. On the General Taylor Theorem and its Applications in Solving Non—linear Problems

    Institute of Scientific and Technical Information of China (English)

    ShiJunLIAO

    1997-01-01

    In this paper,we propose a general Taylor series and prove a general Taylor theorem and then simply give some applications of it in solving non-linear differential equations.The general Taylor series is a family of power series which contains the classical Taylor series in logic.Moreover,it can be valid in much larger regions.

  4. Axioms and Models of Linear Logic

    NARCIS (Netherlands)

    Hesselink, Wim H.

    1990-01-01

    Girard's recent system of linear logic is presented in a way that avoids the two-level structure of formulae and sequents, and that minimises the number of primitive function symbols. A deduction theorem is proved concerning the classical implication as embedded in linear logic. The Hilbert-style ax

  5. Misaligned Image Integration With Local Linear Model.

    Science.gov (United States)

    Baba, Tatsuya; Matsuoka, Ryo; Shirai, Keiichiro; Okuda, Masahiro

    2016-05-01

    We present a new image integration technique for a flash and long-exposure image pair to capture a dark scene without incurring blurring or noisy artifacts. Most existing methods require well-aligned images for the integration, which is often a burdensome restriction in practical use. We address this issue by locally transferring the colors of the flash images using a small fraction of the corresponding pixels in the long-exposure images. We formulate the image integration as a convex optimization problem with the local linear model. The proposed method makes it possible to integrate the color of the long-exposure image with the detail of the flash image without causing any harmful effects to its contrast, where we do not need perfect alignment between the images by virtue of our new integration principle. We show that our method successfully outperforms the state of the art in the image integration and reference-based color transfer for challenging misaligned data sets.

  6. Linearized Functional Minimization for Inverse Modeling

    Energy Technology Data Exchange (ETDEWEB)

    Wohlberg, Brendt [Los Alamos National Laboratory; Tartakovsky, Daniel M. [University of California, San Diego; Dentz, Marco [Institute of Environmental Assessment and Water Research, Barcelona, Spain

    2012-06-21

    Heterogeneous aquifers typically consist of multiple lithofacies, whose spatial arrangement significantly affects flow and transport. The estimation of these lithofacies is complicated by the scarcity of data and by the lack of a clear correlation between identifiable geologic indicators and attributes. We introduce a new inverse-modeling approach to estimate both the spatial extent of hydrofacies and their properties from sparse measurements of hydraulic conductivity and hydraulic head. Our approach is to minimize a functional defined on the vectors of values of hydraulic conductivity and hydraulic head fields defined on regular grids at a user-determined resolution. This functional is constructed to (i) enforce the relationship between conductivity and heads provided by the groundwater flow equation, (ii) penalize deviations of the reconstructed fields from measurements where they are available, and (iii) penalize reconstructed fields that are not piece-wise smooth. We develop an iterative solver for this functional that exploits a local linearization of the mapping from conductivity to head. This approach provides a computationally efficient algorithm that rapidly converges to a solution. A series of numerical experiments demonstrates the robustness of our approach.

  7. An efficient method for generalized linear multiplicative programming problem with multiplicative constraints

    OpenAIRE

    Zhao, Yingfeng; Liu, Sanyang

    2016-01-01

    We present a practical branch and bound algorithm for globally solving generalized linear multiplicative programming problem with multiplicative constraints. To solve the problem, a relaxation programming problem which is equivalent to a linear programming is proposed by utilizing a new two-phase relaxation technique. In the algorithm, lower and upper bounds are simultaneously obtained by solving some linear relaxation programming problems. Global convergence has been proved and results of so...

  8. ROBUST ESTIMATION IN PARTIAL LINEAR MIXED MODEL FOR LONGITUDINAL DATA

    Institute of Scientific and Technical Information of China (English)

    Qin Guoyou; Zhu Zhongyi

    2008-01-01

    In this article, robust generalized estimating equation for the analysis of par- tial linear mixed model for longitudinal data is used. The authors approximate the non- parametric function by a regression spline. Under some regular conditions, the asymptotic properties of the estimators are obtained. To avoid the computation of high-dimensional integral, a robust Monte Carlo Newton-Raphson algorithm is used. Some simulations are carried out to study the performance of the proposed robust estimators. In addition, the authors also study the robustness and the efficiency of the proposed estimators by simulation. Finally, two real longitudinal data sets are analyzed.

  9. Modeling a Linear Generator for Energy Harvesting Applications

    Science.gov (United States)

    2014-12-01

    their potential uses. A flexible model of a linear generator created in MATLAB Simulink is presented. The model is a three-phase, 12-pole, non-salient...attention to linear generators and their potential uses. A flexible model of a linear generator created in MATLAB Simulink is presented. The model...Chapter III and the full MATLAB and Simulink code can be found in the Appendix. Several adaptations of the model have been created, with the results

  10. A generalized fuzzy linear programming approach for environmental management problem under uncertainty.

    Science.gov (United States)

    Fan, Yurui; Huang, Guohe; Veawab, Amornvadee

    2012-01-01

    In this study, a generalized fuzzy linear programming (GFLP) method was developed to deal with uncertainties expressed as fuzzy sets that exist in the constraints and objective function. A stepwise interactive algorithm (SIA) was advanced to solve GFLP model and generate solutions expressed as fuzzy sets. To demonstrate its application, the developed GFLP method was applied to a regional sulfur dioxide (SO2) control planning model to identify effective SO2 mitigation polices with a minimized system performance cost under uncertainty. The results were obtained to represent the amount of SO2 allocated to different control measures from different sources. Compared with the conventional interval-parameter linear programming (ILP) approach, the solutions obtained through GFLP were expressed as fuzzy sets, which can provide intervals for the decision variables and objective function, as well as related possibilities. Therefore, the decision makers can make a tradeoff between model stability and the plausibility based on solutions obtained through GFLP and then identify desired policies for SO2-emission control under uncertainty.

  11. Modeling hierarchical structures - Hierarchical Linear Modeling using MPlus

    OpenAIRE

    Jelonek, Magdalena

    2006-01-01

    The aim of this paper is to present the technique (and its linkage with physics) of overcoming problems connected to modeling social structures, which are typically hierarchical. Hierarchical Linear Models provide a conceptual and statistical mechanism for drawing conclusions regarding the influence of phenomena at different levels of analysis. In the social sciences it is used to analyze many problems such as educational, organizational or market dilemma. This paper introduces the logic of m...

  12. ORDER RESULTS OF GENERAL LINEAR METHODS FOR MULTIPLY STIFF SINGULAR PERTURBATION PROBLEMS

    Institute of Scientific and Technical Information of China (English)

    Si-qing Gan; Geng Sun

    2002-01-01

    In this paper we analyze the error behavior of general linear methods applied to some classes of one-parameter multiply stiff singularly perturbed problems. We obtain the global error estimate of algebraically and diagonally stable general linear methods. The main result of this paper can be viewed as an extension of that obtained by Xiao [13] for the case of Runge-Kutta methods.

  13. Fermions as generalized Ising models

    Science.gov (United States)

    Wetterich, C.

    2017-04-01

    We establish a general map between Grassmann functionals for fermions and probability or weight distributions for Ising spins. The equivalence between the two formulations is based on identical transfer matrices and expectation values of products of observables. The map preserves locality properties and can be realized for arbitrary dimensions. We present a simple example where a quantum field theory for free massless Dirac fermions in two-dimensional Minkowski space is represented by an asymmetric Ising model on a euclidean square lattice.

  14. CPN Models in General Coordinates

    CERN Document Server

    Barnes, K J

    2002-01-01

    An analysis of CPN models is given in terms of general coordinates or arbitrary interpolating fields.Only closed expressions made from simple functions are involved.Special attention is given to CP2 and CP4. In the first of these the retrieval of stereographic coordinates reveals the hermitian form of the metric. A similar analysis for the latter case allows comparison with the Fubini-Study metric.

  15. Analysis of linear trade models and relation to scale economies.

    Science.gov (United States)

    Gomory, R E; Baumol, W J

    1997-09-01

    We discuss linear Ricardo models with a range of parameters. We show that the exact boundary of the region of equilibria of these models is obtained by solving a simple integer programming problem. We show that there is also an exact correspondence between many of the equilibria resulting from families of linear models and the multiple equilibria of economies of scale models.

  16. Weak Consistency and Convergence Rate of Quasi -Maximum Likelihood Estimated in Generalized Linear Models%广义线性模型中拟似然估计的弱相合性及收敛速度

    Institute of Scientific and Technical Information of China (English)

    邓春亮; 胡南辉

    2012-01-01

    在非自然联系情形下讨论了广义线性模型拟似然方程的解βn在λn→∞和其他一些正则性条件下证明了解的弱相合性,并得到其收敛于真值βo的速度为Op(λn^-1/2),其中λn(λ^-n)为方阵Sn=n∑i=1XiX^11的最小(最大)特征值.%In this paper,we study the solution βn of quasi - maximum likelihood equation for generalized linear mod- els (GLMs). Under the assumption of an unnatural link function and other some mild conditions , we prove the weak consistency of the solution to βnquasi - - maximum likelihood equation and present its convergence rate isOp(λn^-1/2),λn(^λn) which denotes the smallest (Maximum)eigervalue of the matrixSn =n∑i=1XiX^11,

  17. Admissibilities of linear estimator in a class of linear models with a multivariate t error variable

    Institute of Scientific and Technical Information of China (English)

    2010-01-01

    This paper discusses admissibilities of estimators in a class of linear models,which include the following common models:the univariate and multivariate linear models,the growth curve model,the extended growth curve model,the seemingly unrelated regression equations,the variance components model,and so on.It is proved that admissible estimators of functions of the regression coefficient β in the class of linear models with multivariate t error terms,called as Model II,are also ones in the case that error terms have multivariate normal distribution under a strictly convex loss function or a matrix loss function.It is also proved under Model II that the usual estimators of β are admissible for p 2 with a quadratic loss function,and are admissible for any p with a matrix loss function,where p is the dimension of β.

  18. Dynamic analysis on generalized linear elastic body subjected to large scale rigid rotations

    Institute of Scientific and Technical Information of China (English)

    刘占芳; 颜世军; 符志

    2013-01-01

    The dynamic analysis of a generalized linear elastic body undergoing large rigid rotations is investigated. The generalized linear elastic body is described in kine-matics through translational and rotational deformations, and a modified constitutive relation for the rotational deformation is proposed between the couple stress and the curvature tensor. Thus, the balance equations of momentum and moment are used for the motion equations of the body. The floating frame of reference formulation is applied to the elastic body that conducts rotations about a fixed axis. The motion-deformation coupled model is developed in which three types of inertia forces along with their incre-ments are elucidated. The finite element governing equations for the dynamic analysis of the elastic body under large rotations are subsequently formulated with the aid of the constrained variational principle. A penalty parameter is introduced, and the rotational angles at element nodes are treated as independent variables to meet the requirement of C1 continuity. The elastic body is discretized through the isoparametric element with 8 nodes and 48 degrees-of-freedom. As an example with an application of the motion-deformation coupled model, the dynamic analysis on a rotating cantilever with two spatial layouts relative to the rotational axis is numerically implemented. Dynamic frequencies of the rotating cantilever are presented at prescribed constant spin velocities. The maximal rigid rotational velocity is extended for ensuring the applicability of the linear model. A complete set of dynamical response of the rotating cantilever in the case of spin-up maneuver is examined, it is shown that, under the ultimate rigid rotational velocities less than the maximal rigid rotational velocity, the stress strength may exceed the material strength tolerance even though the displacement and rotational angle responses are both convergent. The influence of the cantilever layouts on their responses and

  19. Linear control theory for gene network modeling.

    Science.gov (United States)

    Shin, Yong-Jun; Bleris, Leonidas

    2010-09-16

    Systems biology is an interdisciplinary field that aims at understanding complex interactions in cells. Here we demonstrate that linear control theory can provide valuable insight and practical tools for the characterization of complex biological networks. We provide the foundation for such analyses through the study of several case studies including cascade and parallel forms, feedback and feedforward loops. We reproduce experimental results and provide rational analysis of the observed behavior. We demonstrate that methods such as the transfer function (frequency domain) and linear state-space (time domain) can be used to predict reliably the properties and transient behavior of complex network topologies and point to specific design strategies for synthetic networks.

  20. A Fuzzy Approach Using Generalized Dinkelbach’s Algorithm for Multiobjective Linear Fractional Transportation Problem

    Directory of Open Access Journals (Sweden)

    Nurdan Cetin

    2014-01-01

    Full Text Available We consider a multiobjective linear fractional transportation problem (MLFTP with several fractional criteria, such as, the maximization of the transport profitability like profit/cost or profit/time, and its two properties are source and destination. Our aim is to introduce MLFTP which has not been studied in literature before and to provide a fuzzy approach which obtain a compromise Pareto-optimal solution for this problem. To do this, first, we present a theorem which shows that MLFTP is always solvable. And then, reducing MLFTP to the Zimmermann’s “min” operator model which is the max-min problem, we construct Generalized Dinkelbach’s Algorithm for solving the obtained problem. Furthermore, we provide an illustrative numerical example to explain this fuzzy approach.

  1. Linear Factor Models and the Estimation of Expected Returns

    NARCIS (Netherlands)

    Sarisoy, Cisil; de Goeij, Peter; Werker, Bas

    2016-01-01

    Linear factor models of asset pricing imply a linear relationship between expected returns of assets and exposures to one or more sources of risk. We show that exploiting this linear relationship leads to statistical gains of up to 31% in variances when estimating expected returns on individual asse

  2. On the unnecessary ubiquity of hierarchical linear modeling.

    Science.gov (United States)

    McNeish, Daniel; Stapleton, Laura M; Silverman, Rebecca D

    2017-03-01

    In psychology and the behavioral sciences generally, the use of the hierarchical linear model (HLM) and its extensions for discrete outcomes are popular methods for modeling clustered data. HLM and its discrete outcome extensions, however, are certainly not the only methods available to model clustered data. Although other methods exist and are widely implemented in other disciplines, it seems that psychologists have yet to consider these methods in substantive studies. This article compares and contrasts HLM with alternative methods including generalized estimating equations and cluster-robust standard errors. These alternative methods do not model random effects and thus make a smaller number of assumptions and are interpreted identically to single-level methods with the benefit that estimates are adjusted to reflect clustering of observations. Situations where these alternative methods may be advantageous are discussed including research questions where random effects are and are not required, when random effects can change the interpretation of regression coefficients, challenges of modeling with random effects with discrete outcomes, and examples of published psychology articles that use HLM that may have benefitted from using alternative methods. Illustrative examples are provided and discussed to demonstrate the advantages of the alternative methods and also when HLM would be the preferred method. (PsycINFO Database Record (c) 2017 APA, all rights reserved).

  3. Generalised linear models for correlated pseudo-observations, with applications to multi-state models

    DEFF Research Database (Denmark)

    Andersen, Per Kragh; Klein, John P.; Rosthøj, Susanne

    2003-01-01

    Generalised estimating equation; Generalised linear model; Jackknife pseudo-value; Logistic regression; Markov Model; Multi-state model......Generalised estimating equation; Generalised linear model; Jackknife pseudo-value; Logistic regression; Markov Model; Multi-state model...

  4. MODEL SELECTION FOR LOG-LINEAR MODELS OF CONTINGENCY TABLES

    Institute of Scientific and Technical Information of China (English)

    ZHAO Lincheng; ZHANG Hong

    2003-01-01

    In this paper, we propose an information-theoretic-criterion-based model selection procedure for log-linear model of contingency tables under multinomial sampling, and establish the strong consistency of the method under some mild conditions. An exponential bound of miss detection probability is also obtained. The selection procedure is modified so that it can be used in practice. Simulation shows that the modified method is valid. To avoid selecting the penalty coefficient in the information criteria, an alternative selection procedure is given.

  5. Fermions as generalized Ising models

    Directory of Open Access Journals (Sweden)

    C. Wetterich

    2017-04-01

    Full Text Available We establish a general map between Grassmann functionals for fermions and probability or weight distributions for Ising spins. The equivalence between the two formulations is based on identical transfer matrices and expectation values of products of observables. The map preserves locality properties and can be realized for arbitrary dimensions. We present a simple example where a quantum field theory for free massless Dirac fermions in two-dimensional Minkowski space is represented by an asymmetric Ising model on a euclidean square lattice.

  6. Estimation of non-linear growth models by linearization: a simulation study using a Gompertz function.

    Science.gov (United States)

    Vuori, Kaarina; Strandén, Ismo; Sevón-Aimonen, Marja-Liisa; Mäntysaari, Esa A

    2006-01-01

    A method based on Taylor series expansion for estimation of location parameters and variance components of non-linear mixed effects models was considered. An attractive property of the method is the opportunity for an easily implemented algorithm. Estimation of non-linear mixed effects models can be done by common methods for linear mixed effects models, and thus existing programs can be used after small modifications. The applicability of this algorithm in animal breeding was studied with simulation using a Gompertz function growth model in pigs. Two growth data sets were analyzed: a full set containing observations from the entire growing period, and a truncated time trajectory set containing animals slaughtered prematurely, which is common in pig breeding. The results from the 50 simulation replicates with full data set indicate that the linearization approach was capable of estimating the original parameters satisfactorily. However, estimation of the parameters related to adult weight becomes unstable in the case of a truncated data set.

  7. Parameter Estimation for a Computable General Equilibrium Model

    DEFF Research Database (Denmark)

    Arndt, Channing; Robinson, Sherman; Tarp, Finn

    2002-01-01

    We introduce a maximum entropy approach to parameter estimation for computable general equilibrium (CGE) models. The approach applies information theory to estimating a system of non-linear simultaneous equations. It has a number of advantages. First, it imposes all general equilibrium constraints...

  8. Synthetic Domain Theory and Models of Linear Abadi & Plotkin Logic

    DEFF Research Database (Denmark)

    Møgelberg, Rasmus Ejlers; Birkedal, Lars; Rosolini, Guiseppe

    2008-01-01

    Plotkin suggested using a polymorphic dual intuitionistic/linear type theory (PILLY) as a metalanguage for parametric polymorphism and recursion. In recent work the first two authors and R.L. Petersen have defined a notion of parametric LAPL-structure, which are models of PILLY, in which one can...... reason using parametricity and, for example, solve a large class of domain equations, as suggested by Plotkin.In this paper, we show how an interpretation of a strict version of Bierman, Pitts and Russo's language Lily into synthetic domain theory presented by Simpson and Rosolini gives rise...... to a parametric LAPL-structure. This adds to the evidence that the notion of LAPL-structure is a general notion, suitable for treating many different parametric models, and it provides formal proofs of consequences of parametricity expected to hold for the interpretation. Finally, we show how these results...

  9. GENERAL CENTRAL PATH AND THE LARGEST STEP GENERAL CENTRAL PATH FOLLOWING ALGORITHM FOR LINEAR PROGRAMMING

    Institute of Scientific and Technical Information of China (English)

    艾文宝; 张可村

    2001-01-01

    In this paper, we propose a general path following method, in which the starting point can be any feasible interior pair and each iteration uses a step with the largest possible reduction in duality gap. The algorithm maintains the O ( nL) ineration complexity. It enjoys quadratic convergence if the optimal vertex is nondegenerate.

  10. An analytically linearized helicopter model with improved modeling accuracy

    Science.gov (United States)

    Jensen, Patrick T.; Curtiss, H. C., Jr.; Mckillip, Robert M., Jr.

    1991-01-01

    An analytically linearized model for helicopter flight response including rotor blade dynamics and dynamic inflow, that was recently developed, was studied with the objective of increasing the understanding, the ease of use, and the accuracy of the model. The mathematical model is described along with a description of the UH-60A Black Hawk helicopter and flight test used to validate the model. To aid in utilization of the model for sensitivity analysis, a new, faster, and more efficient implementation of the model was developed. It is shown that several errors in the mathematical modeling of the system caused a reduction in accuracy. These errors in rotor force resolution, trim force and moment calculation, and rotor inertia terms were corrected along with improvements to the programming style and documentation. Use of a trim input file to drive the model is examined. Trim file errors in blade twist, control input phase angle, coning and lag angles, main and tail rotor pitch, and uniform induced velocity, were corrected. Finally, through direct comparison of the original and corrected model responses to flight test data, the effect of the corrections on overall model output is shown.

  11. 3D Object Recognition Based on Linear Lie Algebra Model

    Institute of Scientific and Technical Information of China (English)

    LI Fang-xing; WU Ping-dong; SUN Hua-fei; PENG Lin-yu

    2009-01-01

    A surface model called the fibre bundle model and a 3D object model based on linear Lie algebra model are proposed.Then an algorithm of 3D object recognition using the linear Lie algebra models is presented.It is a convenient recognition method for the objects which are symmetric about some axis.By using the presented algorithm,the representation matrices of the fibre or the base curve from only finite points of the linear Lie algebra model can be obtained.At last some recognition results of practicalities are given.

  12. The Solution Structure and Error Estimation for The Generalized Linear Complementarity Problem

    Directory of Open Access Journals (Sweden)

    Tingfa Yan

    2014-07-01

    Full Text Available In this paper, we consider the generalized linear complementarity problem (GLCP. Firstly, we develop some equivalent reformulations of the problem under milder conditions, and then characterize the solution of the GLCP. Secondly, we also establish the global error estimation for the GLCP by weakening the assumption. These results obtained in this paper can be taken as an extension for the classical linear complementarity problems.

  13. Bounded Real Lemma for Generalized Linear System with Finite Discrete Jumps

    Institute of Scientific and Technical Information of China (English)

    2006-01-01

    The strict bounded real lemma for linear system with finite discrete jumps was considered. Especially,the case where D matrices in the system are not assumed to be zero was dealt. Several versions of the bounded real lemma are presented in terms of solution to Riccati differential equations or inequalities with finite discrete jumps.Both the finite and infinite horizon cases are considered. These results generalize the existed bounded real lemma for linear systems.

  14. On necessity proof of strict bounded real lemma for generalized linear systems with finite discrete jumps

    Institute of Scientific and Technical Information of China (English)

    Xiaojun YANG; Zhengxin WENG; Zuohua TIAN

    2004-01-01

    Some preliminary results on strict bounded real lemma for time-varying continuous linear systems are proposed,where uncertainty in initial conditions,terminal cost and extreme of the cost function are dealt with explicitly.Based on these results,a new recursive approach is proposed in the necessity proof of strict bounded real lemma for generalized linear system with finite discrete jumps.

  15. SCI Identification (SCIDNT) program user's guide. [maximum likelihood method for linear rotorcraft models

    Science.gov (United States)

    1979-01-01

    The computer program Linear SCIDNT which evaluates rotorcraft stability and control coefficients from flight or wind tunnel test data is described. It implements the maximum likelihood method to maximize the likelihood function of the parameters based on measured input/output time histories. Linear SCIDNT may be applied to systems modeled by linear constant-coefficient differential equations. This restriction in scope allows the application of several analytical results which simplify the computation and improve its efficiency over the general nonlinear case.

  16. Model Identification of Linear Parameter Varying Aircraft Systems

    OpenAIRE

    Fujimore, Atsushi; Ljung, Lennart

    2007-01-01

    This article presents a parameter estimation of continuous-time polytopic models for a linear parameter varying (LPV) system. The prediction error method of linear time invariant (LTI) models is modified for polytopic models. The modified prediction error method is applied to an LPV aircraft system whose varying parameter is the flight velocity and model parameters are the stability and control derivatives (SCDs). In an identification simulation, the polytopic model is more suitable for expre...

  17. A linear model of population dynamics

    Science.gov (United States)

    Lushnikov, A. A.; Kagan, A. I.

    2016-08-01

    The Malthus process of population growth is reformulated in terms of the probability w(n,t) to find exactly n individuals at time t assuming that both the birth and the death rates are linear functions of the population size. The master equation for w(n,t) is solved exactly. It is shown that w(n,t) strongly deviates from the Poisson distribution and is expressed in terms either of Laguerre’s polynomials or a modified Bessel function. The latter expression allows for considerable simplifications of the asymptotic analysis of w(n,t).

  18. Injecting Abstract Interpretations into Linear Cost Models

    Directory of Open Access Journals (Sweden)

    David Cachera

    2010-06-01

    Full Text Available We present a semantics based framework for analysing the quantitative behaviour of programs with regard to resource usage. We start from an operational semantics equipped with costs. The dioid structure of the set of costs allows for defining the quantitative semantics as a linear operator. We then present an abstraction technique inspired from abstract interpretation in order to effectively compute global cost information from the program. Abstraction has to take two distinct notions of order into account: the order on costs and the order on states. We show that our abstraction technique provides a correct approximation of the concrete cost computations.

  19. Modelling point patterns with linear structures

    DEFF Research Database (Denmark)

    Møller, Jesper; Rasmussen, Jakob Gulddahl

    Many observed spatial point patterns contain points placed roughly on line segments. Point patterns exhibiting such structures can be found for example in archaeology (locations of bronze age graves in Denmark) and geography (locations of mountain tops). We consider a particular class of point...... processes whose realizations contain such linear structures. Such a point process is constructed sequentially by placing one point at a time. The points are placed in such a way that new points are often placed close to previously placed points, and the points form roughly line shaped structures. We...

  20. Modelling point patterns with linear structures

    DEFF Research Database (Denmark)

    Møller, Jesper; Rasmussen, Jakob Gulddahl

    2009-01-01

    Many observed spatial point patterns contain points placed roughly on line segments. Point patterns exhibiting such structures can be found for example in archaeology (locations of bronze age graves in Denmark) and geography (locations of mountain tops). We consider a particular class of point...... processes whose realizations contain such linear structures. Such a point process is constructed sequentially by placing one point at a time. The points are placed in such a way that new points are often placed close to previously placed points, and the points form roughly line shaped structures. We...

  1. A note on fractional linear pure birth and pure death processes in epidemic models

    CERN Document Server

    Garra, Roberto; 10.1016/j.physa.2011.06.005

    2011-01-01

    In this note we highlight the role of fractional linear birth and linear death processes recently studied in \\citet{sakhno} and \\citet{pol}, in relation to epidemic models with empirical power law distribution of the events. Taking inspiration from a formal analogy between the equation of self consistency of the epidemic type aftershock sequences (ETAS) model, and the fractional differential equation describing the mean value of fractional linear growth processes, we show some interesting applications of fractional modelling to study \\textit{ab initio} epidemic processes without the assumption of any empirical distribution. We also show that, in the frame of fractional modelling, subcritical regimes can be linked to linear fractional death processes and supercritical regimes to linear fractional birth processes. Moreover we discuss a simple toy model to underline the possible application of these stochastic growth models to more general epidemic phenomena such as tumoral growth.

  2. Applications of the Linear Logistic Test Model in Psychometric Research

    Science.gov (United States)

    Kubinger, Klaus D.

    2009-01-01

    The linear logistic test model (LLTM) breaks down the item parameter of the Rasch model as a linear combination of some hypothesized elementary parameters. Although the original purpose of applying the LLTM was primarily to generate test items with specified item difficulty, there are still many other potential applications, which may be of use…

  3. Optimal explicit strong-stability-preserving general linear methods : complete results.

    Energy Technology Data Exchange (ETDEWEB)

    Constantinescu, E. M.; Sandu, A.; Mathematics and Computer Science; Virginia Polytechnic Inst. and State Univ.

    2009-03-03

    This paper constructs strong-stability-preserving general linear time-stepping methods that are well suited for hyperbolic PDEs discretized by the method of lines. These methods generalize both Runge-Kutta (RK) and linear multistep schemes. They have high stage orders and hence are less susceptible than RK methods to order reduction from source terms or nonhomogeneous boundary conditions. A global optimization strategy is used to find the most efficient schemes that have low storage requirements. Numerical results illustrate the theoretical findings.

  4. Some generalisations of linear-graph modelling for dynamic systems

    Science.gov (United States)

    de Silva, Clarence W.; Pourazadi, Shahram

    2013-11-01

    Proper modelling of a dynamic system can benefit analysis, simulation, design, evaluation and control of the system. The linear-graph (LG) approach is suitable for modelling lumped-parameter dynamic systems. By using the concepts of graph trees, it provides a graphical representation of the system, with a direct correspondence to the physical component topology. This paper systematically extends the application of LGs to multi-domain (mixed-domain or multi-physics) dynamic systems by presenting a unified way to represent different domains - mechanical, electrical, thermal and fluid. Preservation of the structural correspondence across domains is a particular advantage of LGs when modelling mixed-domain systems. The generalisation of Thevenin and Norton equivalent circuits to mixed-domain systems, using LGs, is presented. The structure of an LG model may follow a specific pattern. Vector LGs are introduced to take advantage of such patterns, giving a general LG representation for them. Through these vector LGs, the model representation becomes simpler and rather compact, both topologically and parametrically. A new single LG element is defined to facilitate the modelling of distributed-parameter (DP) systems. Examples are presented using multi-domain systems (a motion-control system and a flow-controlled pump), a multi-body mechanical system (robot manipulator) and DP systems (structural rods) to illustrate the application and advantages of the methodologies developed in the paper.

  5. Employment of CB models for non-linear dynamic analysis

    Science.gov (United States)

    Klein, M. R. M.; Deloo, P.; Fournier-Sicre, A.

    1990-01-01

    The non-linear dynamic analysis of large structures is always very time, effort and CPU consuming. Whenever possible the reduction of the size of the mathematical model involved is of main importance to speed up the computational procedures. Such reduction can be performed for the part of the structure which perform linearly. Most of the time, the classical Guyan reduction process is used. For non-linear dynamic process where the non-linearity is present at interfaces between different structures, Craig-Bampton models can provide a very rich information, and allow easy selection of the relevant modes with respect to the phenomenon driving the non-linearity. The paper presents the employment of Craig-Bampton models combined with Newmark direct integration for solving non-linear friction problems appearing at the interface between the Hubble Space Telescope and its solar arrays during in-orbit maneuvers. Theory, implementation in the FEM code ASKA, and practical results are shown.

  6. Modeling neuro-vascular coupling in rat cerebellum: characterization of deviations from linearity

    DEFF Research Database (Denmark)

    Rasmussen, Tina; Holstein-Rathlou, Niels-Henrik; Lauritzen, Martin

    2009-01-01

    We investigated the quantitative relation between neuronal activity and blood flow by means of a general parametric mathematical model which described the neuro-vascular system as being dynamic, linear, time-invariant, and subjected to additive noise. The model was constructed from measurements...... by means of system identification methods and validated across experiments. We sought to cover the system response to multiple stimulation frequencies and durations by a single model. We used the model to investigate the transport delay, the linear order, the deviations from linearity, and conditions...

  7. Multivariate linear models and repeated measurements revisited

    DEFF Research Database (Denmark)

    Dalgaard, Peter

    2009-01-01

    Methods for generalized analysis of variance based on multivariate normal theory have been known for many years. In a repeated measurements context, it is most often of interest to consider transformed responses, typically within-subject contrasts or averages. Efficiency considerations leads...

  8. Comparison of linear, mixed integer and non-linear programming methods in energy system dispatch modelling

    DEFF Research Database (Denmark)

    Ommen, Torben Schmidt; Markussen, Wiebke Brix; Elmegaard, Brian

    2014-01-01

    differences and differences between the solution found by each optimisation method. One of the investigated approaches utilises LP (linear programming) for optimisation, one uses LP with binary operation constraints, while the third approach uses NLP (non-linear programming). The LP model is used...... of selected units by 23%, while for a non-linear approach the increase can be higher than 39%. The results indicate a higher coherence between the two latter approaches, and that the MLP (mixed integer programming) optimisation is most appropriate from a viewpoint of accuracy and runtime. © 2014 Elsevier Ltd...

  9. Analyticity of solutions of analytic non-linear general elliptic boundary value problems,and some results about linear problems

    Institute of Scientific and Technical Information of China (English)

    WANG Rouhuai

    2006-01-01

    The main aim of this paper is to discuss the problem concerning the analyticity of the solutions of analytic non-linear elliptic boundary value problems.It is proved that if the corresponding first variation is regular in Lopatinski(i) sense,then the solution is analytic up to the boundary.The method of proof really covers the case that the corresponding first variation is regularly elliptic in the sense of Douglis-Nirenberg-Volevich,and hence completely generalize the previous result of C.B.Morrey.The author also discusses linear elliptic boundary value problems for systems of ellip tic partial differential equations where the boundary operators are allowed to have singular integral operators as their coefficients.Combining the standard Fourier transform technique with analytic continuation argument,the author constructs the Poisson and Green's kernel matrices related to the problems discussed and hence obtain some representation formulae to the solutions.Some a priori estimates of Schauder type and Lp type are obtained.

  10. Statistical Inference for Partially Linear Regression Models with Measurement Errors

    Institute of Scientific and Technical Information of China (English)

    Jinhong YOU; Qinfeng XU; Bin ZHOU

    2008-01-01

    In this paper, the authors investigate three aspects of statistical inference for the partially linear regression models where some covariates are measured with errors. Firstly,a bandwidth selection procedure is proposed, which is a combination of the difference-based technique and GCV method. Secondly, a goodness-of-fit test procedure is proposed,which is an extension of the generalized likelihood technique. Thirdly, a variable selection procedure for the parametric part is provided based on the nonconcave penalization and corrected profile least squares. Same as "Variable selection via nonconcave penalized like-lihood and its oracle properties" (J. Amer. Statist. Assoc., 96, 2001, 1348-1360), it is shown that the resulting estimator has an oracle property with a proper choice of regu-larization parameters and penalty function. Simulation studies are conducted to illustrate the finite sample performances of the proposed procedures.

  11. Distributing Correlation Coefficients of Linear Structure-Activity/Property Models

    Directory of Open Access Journals (Sweden)

    Sorana D. BOLBOACA

    2011-12-01

    Full Text Available Quantitative structure-activity/property relationships are mathematical relationships linking chemical structure and activity/property in a quantitative manner. These in silico approaches are frequently used to reduce animal testing and risk-assessment, as well as to increase time- and cost-effectiveness in characterization and identification of active compounds. The aim of our study was to investigate the pattern of correlation coefficients distribution associated to simple linear relationships linking the compounds structure with their activities. A set of the most common ordnance compounds found at naval facilities with a limited data set with a range of toxicities on aquatic ecosystem and a set of seven properties was studied. Statistically significant models were selected and investigated. The probability density function of the correlation coefficients was investigated using a series of possible continuous distribution laws. Almost 48% of the correlation coefficients proved fit Beta distribution, 40% fit Generalized Pareto distribution, and 12% fit Pert distribution.

  12. Generalized model of island biodiversity

    Science.gov (United States)

    Kessler, David A.; Shnerb, Nadav M.

    2015-04-01

    The dynamics of a local community of competing species with weak immigration from a static regional pool is studied. Implementing the generalized competitive Lotka-Volterra model with demographic noise, a rich dynamics with four qualitatively distinct phases is unfolded. When the overall interspecies competition is weak, the island species recapitulate the mainland species. For higher values of the competition parameter, the system still admits an equilibrium community, but now some of the mainland species are absent on the island. Further increase in competition leads to an intermittent "disordered" phase, where the dynamics is controlled by invadable combinations of species and the turnover rate is governed by the migration. Finally, the strong competition phase is glasslike, dominated by uninvadable states and noise-induced transitions. Our model contains, as a special case, the celebrated neutral island theories of Wilson-MacArthur and Hubbell. Moreover, we show that slight deviations from perfect neutrality may lead to each of the phases, as the Hubbell point appears to be quadracritical.

  13. Interior-point algorithm based on general kernel function for monotone linear complementarity problem

    Institute of Scientific and Technical Information of China (English)

    LIU Yong; BAI Yan-qin

    2009-01-01

    A polynomial interior-point algorithm is presented for monotone linear complementarity problem (MLCP) based on:a class of kernel functions with the general barrier term, which are called general kernel functions. Under the mild conditions for the barrier term, the complexity bound of algorithm in terms of such kernel function and its derivatives is obtained. The approach is actually an extension of the existing work which only used the specific kernel functions for the MLCP.

  14. Dynamic Model of Linear Induction Motor Considering the End Effects

    Directory of Open Access Journals (Sweden)

    H. A. Hairik

    2009-01-01

    Full Text Available In this paper the dynamic behavior of linear induction motor is described by a mathematical model taking into account the end effects and the core losses. The need for such a model rises due to the complexity of linear induction motors electromagnetic field theory. The end affects by introducing speed dependent scale factor to the magnetizing inductance and series resistance in the d-axis equivalent circuit. Simulation results are presented to show the validity of the model during both no-load and sudden load change intervals. This model can also be used directly in simulation researches for linear induction motor vector control drive systems.

  15. A Study of the Equivalence of the BLUEs between a Partitioned Singular Linear Model and Its Reduced Singular Linear Models

    Institute of Scientific and Technical Information of China (English)

    Bao Xue ZHANG; Bai Sen LIU; Chang Yu LU

    2004-01-01

    Consider the partitioned linear regression model A = (y, X1β1 + X2β2, σ2V) and its four reduced linear models, where y is an n × 1 observable random vector with E(y) = Xβ and dispersion matrix Var(y) = σ2V, where σ2 is an unknown positive scalar, V is an n × n known symmetric nonnegative definite matrix, X = (X1: X2) is an n× (p+q) known design matrix with rank(X) = r ≤ (p+q),andβ = (β'1:β'2)' withβ1 andβ2 being p × 1 and q × 1 vectors of unknown parameters, respectively. In this article the formulae for the differences between the best linear unbiased estimators of M2X1β1under the model A and its best linear unbiased estimators under the reduced linear models of A are given,where M2 = I - X2X2+. Furthermore, the necessary and sufficient conditions for the equalities between the best linear unbiased estimators of M2X1β1 under the model A and those under its reduced linear models are established. Lastly, we also study the connections between the model A and its linear transformation model.

  16. A general non-linear optimization algorithm for lower bound limit analysis

    DEFF Research Database (Denmark)

    Krabbenhøft, Kristian; Damkilde, Lars

    2003-01-01

    The non-linear programming problem associated with the discrete lower bound limit analysis problem is treated by means of an algorithm where the need to linearize the yield criteria is avoided. The algorithm is an interior point method and is completely general in the sense that no particular...... finite element discretization or yield criterion is required. As with interior point methods for linear programming the number of iterations is affected only little by the problem size. Some practical implementation issues are discussed with reference to the special structure of the common lower bound...... load optimization problem. and finally the efficiency and accuracy of the method is demonstrated by means of examples of plate and slab structures obeying different non-linear yield criteria. Copyright (C) 2002 John Wiley Sons. Ltd....

  17. SELECTION OF THE LINEAR COMBINING VECTOR G OF THE GENERALIZED SELF-SHRINKING GENERATORS

    Institute of Scientific and Technical Information of China (English)

    Dong Lihua; Zeng Yong; Hu Yupu

    2006-01-01

    Given an m-sequence, the main factor influencing the least period of the Generalized Self-Shrinking (GSS) sequence is the selection of the linear combining vector G. Based on the calculation of the minimalpolynomial ofL GSS sequences and the comparison of their degrees, an algorithm for selecting the linear combining vector G is presented, which is simple to understand, to implement and to prove. By using this method,much more than 2L-1 linear combining vectors G of the desired properties will be resulted. Thus in the practical application the linear combining vector G can be chosen with great arbitrariness. Additionally, this algorithm can be extended to any finite field easily.

  18. More on Generalizations and Modifications of Iterative Methods for Solving Large Sparse Indefinite Linear Systems

    Directory of Open Access Journals (Sweden)

    Jen-Yuan Chen

    2014-01-01

    Full Text Available Continuing from the works of Li et al. (2014, Li (2007, and Kincaid et al. (2000, we present more generalizations and modifications of iterative methods for solving large sparse symmetric and nonsymmetric indefinite systems of linear equations. We discuss a variety of iterative methods such as GMRES, MGMRES, MINRES, LQ-MINRES, QR MINRES, MMINRES, MGRES, and others.

  19. Generalized Jacobi and Gauss-Seidel Methods for Solving Linear System of Equations

    Institute of Scientific and Technical Information of China (English)

    Davod Khojasteh Salkuyeh

    2007-01-01

    The Jacobi and Gauss-Seidel algorithms are among the stationary iterative methods for solving linear system of equations. They are now mostly used as preconditioners for the popular iterative solvers. In this paper a generalization of these methods are proposed and their convergence properties are studied. Some numerical experiments are given to show the efficiency of the new methods.

  20. ESTIMATION METHOD FOR SOLUTIONS TO GENERAL LINEAR SYSTEM OF VOLTERRAINTEGRAL INEQUALITIES INVOLVING ITERATED INTEGRAL FUNCTIONALS

    Institute of Scientific and Technical Information of China (English)

    MA Qinghua; YANG Enhao

    2000-01-01

    An estimation method for solutions to the general linear system of Volterratype integral inequalities containing several iterated integral functionals is obtained. This method is based on a result proved by the present second author in Journ. Math. Anal. Appl.(1984). A certain two-dimensional system of nonlinear ordinary differential equations is also discussed to demonstrate the usefulness of our method.

  1. ON THE SOLVABILITY OF GENERAL LINEAR METHODS FOR DISSIPATIVE DYNAMICAL SYSTEMS

    Institute of Scientific and Technical Information of China (English)

    Ai-guo Xiao

    2000-01-01

    The main purpose of the present paper is to examine the existence and local uniqueness of solutions of the implicit equations arising in the application of a weakly algebraically stable general linear methods to dissipative dynamical systems, and to extend the existing relevant results of Runge-Kutta methods by Humphries and Stuart(1994).

  2. Linear Latent Force Models using Gaussian Processes

    CERN Document Server

    Álvarez, Mauricio A; Lawrence, Neil D

    2011-01-01

    Purely data driven approaches for machine learning present difficulties when data is scarce relative to the complexity of the model or when the model is forced to extrapolate. On the other hand, purely mechanistic approaches need to identify and specify all the interactions in the problem at hand (which may not be feasible) and still leave the issue of how to parameterize the system. In this paper, we present a hybrid approach using Gaussian processes and differential equations to combine data driven modelling with a physical model of the system. We show how different, physically-inspired, kernel functions can be developed through sensible, simple, mechanistic assumptions about the underlying system. The versatility of our approach is illustrated with three case studies from motion capture, computational biology and geostatistics.

  3. Numerical modelling in non linear fracture mechanics

    Directory of Open Access Journals (Sweden)

    Viggo Tvergaard

    2007-07-01

    Full Text Available Some numerical studies of crack propagation are based on using constitutive models that accountfor damage evolution in the material. When a critical damage value has been reached in a materialpoint, it is natural to assume that this point has no more carrying capacity, as is done numerically in the elementvanish technique. In the present review this procedure is illustrated for micromechanically based materialmodels, such as a ductile failure model that accounts for the nucleation and growth of voids to coalescence, and a model for intergranular creep failure with diffusive growth of grain boundary cavities leading to micro-crack formation. The procedure is also illustrated for low cycle fatigue, based on continuum damage mechanics. In addition, the possibility of crack growth predictions for elastic-plastic solids using cohesive zone models to represent the fracture process is discussed.

  4. AN ACCURATE SOLUTION OF THE LINEAR THEORY OF THE WIND-DRIVEN OCEAN CIRCULATION-I. THE GENERALIZED SOLUTION

    Institute of Scientific and Technical Information of China (English)

    Zhang Qing-hua; Qu Yuan-yuan; Xia Chang-shui

    2003-01-01

    To model the wind-driven ocean circulation of the isobath rectangular basin, the linear vorticity equation with the meridional friction term was used compared to the Munk's theory on the ocean circulation. The generalized solution of the vorticity equation was thus worked out in the sense of Fourier averaging by using the corrected Fourier expansion. The method to obtain the undetermined coefficients was presented using the viscous boundary conditions.

  5. Linear latent variable models: the lava-package

    DEFF Research Database (Denmark)

    Holst, Klaus Kähler; Budtz-Jørgensen, Esben

    2013-01-01

    An R package for specifying and estimating linear latent variable models is presented. The philosophy of the implementation is to separate the model specification from the actual data, which leads to a dynamic and easy way of modeling complex hierarchical structures. Several advanced features...... are implemented including robust standard errors for clustered correlated data, multigroup analyses, non-linear parameter constraints, inference with incomplete data, maximum likelihood estimation with censored and binary observations, and instrumental variable estimators. In addition an extensive simulation...

  6. On-line control models for the Stanford Linear Collider

    Energy Technology Data Exchange (ETDEWEB)

    Sheppard, J.C.; Helm, R.H.; Lee, M.J.; Woodley, M.D.

    1983-03-01

    Models for computer control of the SLAC three-kilometer linear accelerator and damping rings have been developed as part of the control system for the Stanford Linear Collider. Some of these models have been tested experimentally and implemented in the control program for routine linac operations. This paper will describe the development and implementation of these models, as well as some of the operational results.

  7. Identification of Influential Points in a Linear Regression Model

    Directory of Open Access Journals (Sweden)

    Jan Grosz

    2011-03-01

    Full Text Available The article deals with the detection and identification of influential points in the linear regression model. Three methods of detection of outliers and leverage points are described. These procedures can also be used for one-sample (independentdatasets. This paper briefly describes theoretical aspects of several robust methods as well. Robust statistics is a powerful tool to increase the reliability and accuracy of statistical modelling and data analysis. A simulation model of the simple linear regression is presented.

  8. Extended Linear Models with Gaussian Priors

    DEFF Research Database (Denmark)

    Quinonero, Joaquin

    2002-01-01

    on the parameters. The Relevance Vector Machine, introduced by Tipping, is a particular case of such a model. I give the detailed derivations of the expectation-maximisation (EM) algorithm used in the training. These derivations are not found in the literature, and might be helpful for newcomers....

  9. Random effect selection in generalised linear models

    DEFF Research Database (Denmark)

    Denwood, Matt; Houe, Hans; Forkman, Björn;

    We analysed abattoir recordings of meat inspection codes with possible relevance to onfarm animal welfare in cattle. Random effects logistic regression models were used to describe individual-level data obtained from 461,406 cattle slaughtered in Denmark. Our results demonstrate that the largest...

  10. Linear Factor Models and the Estimation of Expected Returns

    NARCIS (Netherlands)

    Sarisoy, Cisil; de Goeij, Peter; Werker, Bas

    2015-01-01

    Estimating expected returns on individual assets or portfolios is one of the most fundamental problems of finance research. The standard approach, using historical averages,produces noisy estimates. Linear factor models of asset pricing imply a linear relationship between expected returns and exposu

  11. Model Reduction by Moment Matching for Linear Switched Systems

    DEFF Research Database (Denmark)

    Bastug, Mert; Petreczky, Mihaly; Wisniewski, Rafal;

    2014-01-01

    A moment-matching method for the model reduction of linear switched systems (LSSs) is developed. The method is based based upon a partial realization theory of LSSs and it is similar to the Krylov subspace methods used for moment matching for linear systems. The results are illustrated by numeric...

  12. Transient Response Model of Standing Wave Piezoelectric Linear Ultrasonic Motor

    Institute of Scientific and Technical Information of China (English)

    SHI Yunlai; CHEN Chao; ZHAO Chunsheng

    2012-01-01

    A transient response model for describing the starting and stopping characteristics of the standing wave piezoelectric linear ultrasonic motor was presented.Based on the contact dynamic model,the kinetic equation of the motor was derived.The starting and stopping characteristics of the standing wave piezoelectric linear ultrasonic motor according to different loads,contact stiffness and inertia mass were described and analyzed,respectively.To validate the transient response model,a standing wave piezoelectric linear ultrasonic motor based on in-plane modes was used to carry out the simulation and experimental study.The corresponding results showed that the simulation of the motor performances based on the proposed model agreed well with the experimental results.This model will helpful to improve the stepping characteristics and the control flexibility of the standing wave piezoelectric linear ultrasonic motor.

  13. A Generalised Concept of Dominance in Linear Programming Models

    OpenAIRE

    Drynan, Ross G.

    1987-01-01

    The notion of dominance most familiar to agricultural economists is perhaps the decision theoretic concept entailed in comparing one risky prospect to others. But dominance concepts are also relevant in the linear programming context, for example in identifying redundant constraints. In this note, the standard concept of dominance in linear programming is generalized by defining dominance with respect to differing levels of information about the programming problem.

  14. Generalization performance of regularized neural network models

    DEFF Research Database (Denmark)

    Larsen, Jan; Hansen, Lars Kai

    1994-01-01

    Architecture optimization is a fundamental problem of neural network modeling. The optimal architecture is defined as the one which minimizes the generalization error. This paper addresses estimation of the generalization performance of regularized, complete neural network models. Regularization...

  15. A linear algebra model for quasispecies

    Science.gov (United States)

    García-Pelayo, Ricardo

    2002-06-01

    In the present work we present a simple model of the population genetics of quasispecies. We show that the error catastrophe arises because in Biology the mutation rates are almost zero and the mutations themselves are almost neutral. We obtain and discuss previously known results from the point of view of this model. New results are: the fitness of a sequence in terms of its abundance in the quasispecies, a formula for the stable distribution of a quasispecies in which the fitness depends only on the Hamming distance to the master sequence, the time it takes the master sequence to generate a stable quasispecies (such as in the infection by a virus) and the fitness of quasispecies.

  16. Modeling and optimization of ultrasonic linear motors

    OpenAIRE

    Fernandez Lopez, José; Perriard, Yves

    2007-01-01

    Ultrasonic motors have received much attention these last years, in particular with regard to their modeling and their design principle. Their operating principle is based on piezoelectric ceramics that convert electrical energy into mechanical energy in the form of vibrations of an elastic body whose surface points perform an elliptic motion with a frequency in the ultrasonic range (≥ 20 kHz). The moving part, which is pressed against the vibrating body by a prestressing force, can move than...

  17. Forecasting telecommunications data with linear models

    OpenAIRE

    Madden, Gary G; Tan, Joachim

    2007-01-01

    For telecommunication companies to successfully manage their business, companies rely on mapping future trends and usage patterns. However, the evolution of telecommunications technology and systems in the provision of services renders imperfections in telecommunications data and impinges on a company’s’ ability to properly evaluate and plan their business. ITU Recommendation E.507 provides a selection of econometric models for forecasting these trends. However, no specific guidance is given....

  18. Circular and linear modeling of female sexual desire and arousal.

    Science.gov (United States)

    Hayes, Richard D

    2011-03-01

    There is debate in the scientific literature regarding which model most accurately represents the female sexual response. Traditionally, sex research has been conducted within the framework of the linear sexual response model proposed by Masters and Johnson, modified by Kaplan, then Robinson. Criticism of linear models prompted the development of a composite model of the female sexual response by Basson et al., which included linear and circular pathways. This review aims to systematically assess published studies to determine the extent to which circular and linear models or pathways reflect the female sexual response. Medline, EMBASE, and PsychINFO databases were searched for original data papers and review articles. Inclusion criteria were that articles were published since 1990, in English, and compared linear and circular sexual response models or addressed aspects of these models. Reviews were required to be systematic and include a meta-analysis. Of the 898 studies identified through the initial literature search, 13 original studies and one review met the inclusion criteria. Two studies directly compared models providing limited evidence that most women identify with linear sexual response pathways. However, there is increasing evidence that circular pathways may accurately reflect some aspects of the female sexual response. Further comparative studies are encouraged.

  19. Consensus of Continuous-Time Multiagent Systems with General Linear Dynamics and Nonuniform Sampling

    Directory of Open Access Journals (Sweden)

    Yanping Gao

    2013-01-01

    Full Text Available This paper studies the consensus problem of multiple agents with general linear continuous-time dynamics. It is assumed that the information transmission among agents is intermittent; namely, each agent can only obtain the information of other agents at some discrete times, where the discrete time intervals may not be equal. Some sufficient conditions for consensus in the cases of state feedback and static output feedback are established, and it is shown that if the controller gain and the upper bound of discrete time intervals satisfy certain linear matrix inequality, then consensus can be reached. Simulations are performed to validate the theoretical results.

  20. H∞ filtering of Markov jump linear systems with general transition probabilities and output quantization.

    Science.gov (United States)

    Shen, Mouquan; Park, Ju H

    2016-07-01

    This paper addresses the H∞ filtering of continuous Markov jump linear systems with general transition probabilities and output quantization. S-procedure is employed to handle the adverse influence of the quantization and a new approach is developed to conquer the nonlinearity induced by uncertain and unknown transition probabilities. Then, sufficient conditions are presented to ensure the filtering error system to be stochastically stable with the prescribed performance requirement. Without specified structure imposed on introduced slack variables, a flexible filter design method is established in terms of linear matrix inequalities. The effectiveness of the proposed method is validated by a numerical example.

  1. Linear Sigma Models With Strongly Coupled Phases -- One Parameter Models

    CERN Document Server

    Hori, Kentaro

    2013-01-01

    We systematically construct a class of two-dimensional $(2,2)$ supersymmetric gauged linear sigma models with phases in which a continuous subgroup of the gauge group is totally unbroken. We study some of their properties by employing a recently developed technique. The focus of the present work is on models with one K\\"ahler parameter. The models include those corresponding to Calabi-Yau threefolds, extending three examples found earlier by a few more, as well as Calabi-Yau manifolds of other dimensions and non-Calabi-Yau manifolds. The construction leads to predictions of equivalences of D-brane categories, systematically extending earlier examples. There is another type of surprise. Two distinct superconformal field theories corresponding to Calabi-Yau threefolds with different Hodge numbers, $h^{2,1}=23$ versus $h^{2,1}=59$, have exactly the same quantum K\\"ahler moduli space. The strong-weak duality plays a crucial r\\^ole in confirming this, and also is useful in the actual computation of the metric on t...

  2. Optimization for decision making linear and quadratic models

    CERN Document Server

    Murty, Katta G

    2010-01-01

    While maintaining the rigorous linear programming instruction required, Murty's new book is unique in its focus on developing modeling skills to support valid decision-making for complex real world problems, and includes solutions to brand new algorithms.

  3. Estimation of non-linear growth models by linearization: a simulation study using a Gompertz function

    Directory of Open Access Journals (Sweden)

    Mäntysaari Esa A

    2006-06-01

    Full Text Available Abstract A method based on Taylor series expansion for estimation of location parameters and variance components of non-linear mixed effects models was considered. An attractive property of the method is the opportunity for an easily implemented algorithm. Estimation of non-linear mixed effects models can be done by common methods for linear mixed effects models, and thus existing programs can be used after small modifications. The applicability of this algorithm in animal breeding was studied with simulation using a Gompertz function growth model in pigs. Two growth data sets were analyzed: a full set containing observations from the entire growing period, and a truncated time trajectory set containing animals slaughtered prematurely, which is common in pig breeding. The results from the 50 simulation replicates with full data set indicate that the linearization approach was capable of estimating the original parameters satisfactorily. However, estimation of the parameters related to adult weight becomes unstable in the case of a truncated data set.

  4. Generalized complex geometry, generalized branes and the Hitchin sigma model

    Energy Technology Data Exchange (ETDEWEB)

    Zucchini, Roberto E-mail: zucchinir@bo.infn.it

    2005-03-01

    Hitchin's generalized complex geometry has been shown to be relevant in compactifications of superstring theory with fluxes and is expected to lead to a deeper understanding of mirror symmetry. Gualtieri's notion of generalized complex submanifold seems to be a natural candidate for the description of branes in this context. Recently, we introduced a Batalin-Vilkovisky field theoretic realization of generalized complex geometry, the Hitchin sigma model, extending the well known Poisson sigma model. In this paper, exploiting Gualtieri's formalism, we incorporate branes into the model. A detailed study of the boundary conditions obeyed by the world sheet fields is provided. Finally, it is found that, when branes are present, the classical Batalin-Vilkovisky cohomology contains an extra sector that is related non trivially to a novel cohomology associated with the branes as generalized complex submanifolds. (author)

  5. Generalized complex geometry, generalized branes and the Hitchin sigma model

    CERN Document Server

    Zucchini, R

    2005-01-01

    Hitchin's generalized complex geometry has been shown to be relevant in compactifications of superstring theory with fluxes and is expected to lead to a deeper understanding of mirror symmetry. Gualtieri's notion of generalized complex submanifold seems to be a natural candidate for the description of branes in this context. Recently, we introduced a field theoretic realization of generalized complex geometry, the Hitchin sigma model, extending the well known Poisson sigma model. In this paper, exploiting Gualtieri's formalism, we incorporate branes into the model. A detailed study of the boundary conditions obeyed by the world sheet fields is provided. Finally, it is found that, when branes are present, the classical Batalin--Vilkovisky cohomology contains an extra sector that is related non trivially to a novel cohomology associated with the branes as generalized complex submanifolds.

  6. A TRUST REGION ALGORITHM VIA BILEVEL LINEAR PROGRAMMING FOR SOLVING THE GENERAL MULTICOMMODITY MINIMAL COST FLOW PROBLEMS

    Institute of Scientific and Technical Information of China (English)

    ZhuDetong

    2004-01-01

    This paper proposes a nonmonotonic backtracking trust region algorithm via bilevel linear programming for solving the general multicommodity minimal cost flow problems. Using the duality theory of the linear programming and convex theory, the generalized directional derivative of the general multicommodity minimal cost flow problems is derived. The global convergence and superlinear convergence rate of the proposed algorithm are established under some mild conditions.

  7. An Optimally Generalized Steepest-Descent Algorithm for Solving Ill-Posed Linear Systems

    Directory of Open Access Journals (Sweden)

    Chein-Shan Liu

    2013-01-01

    Full Text Available It is known that the steepest-descent method converges normally at the first few iterations, and then it slows down. We modify the original steplength and descent direction by an optimization argument with the new steplength as being a merit function to be maximized. An optimal iterative algorithm with m-vector descent direction in a Krylov subspace is constructed, of which the m optimal weighting parameters are solved in closed-form to accelerate the convergence speed in solving ill-posed linear problems. The optimally generalized steepest-descent algorithm (OGSDA is proven to be convergent with very fast convergence speed, accurate and robust against noisy disturbance, which is confirmed by numerical tests of some well-known ill-posed linear problems and linear inverse problems.

  8. Modelling debris flows down general channels

    Directory of Open Access Journals (Sweden)

    S. P. Pudasaini

    2005-01-01

    solve the highly non-linear equations. Simulation results present the combined effects of curvature, torsion and pore pressure on the dynamics of the flow over a general basal topography. These simulation results reveal new physical insight of debris flows over such non-trivial topography. Model equations are applied to laboratory avalanche and debris-flow-flume tests. Very good agreement between the theory and experiments is established.

  9. More on generalized Heisenberg ferromagnet models

    CERN Document Server

    Oh, P; Oh, Phillial; Park, Q Han

    1996-01-01

    We generalize the integrable Heisenberg ferromagnet model according to each Hermitian symmetric spaces and address various new aspects of the generalized model. Using the first order formalism of generalized spins which are defined on the coadjoint orbits of arbitrary groups, we construct a Lagrangian of the generalized model from which we obtain the Hamiltonian structure explicitly in the case of CP(N-1) orbit. The gauge equivalence between the generalized Heisenberg ferromagnet and the nonlinear Schr\\"{o}dinger models is given. Using the equivalence, we find infinitely many conserved integrals of both models.

  10. Frequency Response of Synthetic Vocal Fold Models with Linear and Nonlinear Material Properties

    Science.gov (United States)

    Shaw, Stephanie M.; Thomson, Scott L.; Dromey, Christopher; Smith, Simeon

    2014-01-01

    Purpose The purpose of this study was to create synthetic vocal fold models with nonlinear stress-strain properties and to investigate the effect of linear versus nonlinear material properties on fundamental frequency during anterior-posterior stretching. Method Three materially linear and three materially nonlinear models were created and stretched up to 10 mm in 1 mm increments. Phonation onset pressure (Pon) and fundamental frequency (F0) at Pon were recorded for each length. Measurements were repeated as the models were relaxed in 1 mm increments back to their resting lengths, and tensile tests were conducted to determine the stress-strain responses of linear versus nonlinear models. Results Nonlinear models demonstrated a more substantial frequency response than did linear models and a more predictable pattern of F0 increase with respect to increasing length (although range was inconsistent across models). Pon generally increased with increasing vocal fold length for nonlinear models, whereas for linear models, Pon decreased with increasing length. Conclusions Nonlinear synthetic models appear to more accurately represent the human vocal folds than linear models, especially with respect to F0 response. PMID:22271874

  11. Scaling and linear response in the GOY model

    NARCIS (Netherlands)

    Kadanoff, Leo; Lohse, Detlef; Schörghofer, Norbert

    1997-01-01

    The GOY model is a model for turbulence in which two conserved quantities cascade up and down a linear array of shells. When the viscosity parameter, small nu, Greek, is small the model has a qualitative behavior which is similar to the Kolmogorov theories of turbulence. Here a static solution to th

  12. A hierarchical linear model for tree height prediction.

    Science.gov (United States)

    Vicente J. Monleon

    2003-01-01

    Measuring tree height is a time-consuming process. Often, tree diameter is measured and height is estimated from a published regression model. Trees used to develop these models are clustered into stands, but this structure is ignored and independence is assumed. In this study, hierarchical linear models that account explicitly for the clustered structure of the data...

  13. Modelling Nonlinear Sequence Generators in terms of Linear Cellular Automata

    CERN Document Server

    Fúster-Sabater, Amparo; 10.1016/j.apm.2005.08.013

    2010-01-01

    In this work, a wide family of LFSR-based sequence generators, the so-called Clock-Controlled Shrinking Generators (CCSGs), has been analyzed and identified with a subset of linear Cellular Automata (CA). In fact, a pair of linear models describing the behavior of the CCSGs can be derived. The algorithm that converts a given CCSG into a CA-based linear model is very simple and can be applied to CCSGs in a range of practical interest. The linearity of these cellular models can be advantageously used in two different ways: (a) for the analysis and/or cryptanalysis of the CCSGs and (b) for the reconstruction of the output sequence obtained from this kind of generators.

  14. Linearized models for a new magnetic control in MAST

    Energy Technology Data Exchange (ETDEWEB)

    Artaserse, G., E-mail: giovanni.artaserse@enea.it [Associazione Euratom-ENEA sulla Fusione, Via Enrico Fermi 45, I-00044 Frascati (RM) (Italy); Maviglia, F.; Albanese, R. [Associazione Euratom-ENEA-CREATE sulla Fusione, Via Claudio 21, I-80125 Napoli (Italy); McArdle, G.J.; Pangione, L. [EURATOM/CCFE Fusion Association, Culham Science Centre, Abingdon, Oxon, OX14 3DB (United Kingdom)

    2013-10-15

    Highlights: ► We applied linearized models for a new magnetic control on MAST tokamak. ► A suite of procedures, conceived to be machine independent, have been used. ► We carried out model-based simulations, taking into account eddy currents effects. ► Comparison with the EFIT flux maps and the experimental magnetic signals are shown. ► A current driven model for the dynamic simulations of the experimental data have been performed. -- Abstract: The aim of this work is to provide reliable linearized models for the design and assessment of a new magnetic control system for MAST (Mega Ampère Spherical Tokamak) using rtEFIT, which can easily be exported to MAST Upgrade. Linearized models for magnetic control have been obtained using the 2D axisymmetric finite element code CREATE L. MAST linearized models include equivalent 2D axisymmetric schematization of poloidal field (PF) coils, vacuum vessel, and other conducting structures. A plasmaless and a double null configuration have been chosen as benchmark cases for the comparison with experimental data and EFIT reconstructions. Good agreement has been found with the EFIT flux map and the experimental signals coming from magnetic probes with only few mismatches probably due to broken sensors. A suite of procedures (equipped with a user friendly interface to be run even remotely) to provide linearized models for magnetic control is now available on the MAST linux machines. A new current driven model has been used to obtain a state space model having the PF coil currents as inputs. Dynamic simulations of experimental data have been carried out using linearized models, including modelling of the effects of the passive structures, showing a fair agreement. The modelling activity has been useful also to reproduce accurately the interaction between plasma current and radial position control loops.

  15. A review of linear response theory for general differentiable dynamical systems

    Science.gov (United States)

    Ruelle, David

    2009-04-01

    The classical theory of linear response applies to statistical mechanics close to equilibrium. Away from equilibrium, one may describe the microscopic time evolution by a general differentiable dynamical system, identify nonequilibrium steady states (NESS) and study how these vary under perturbations of the dynamics. Remarkably, it turns out that for uniformly hyperbolic dynamical systems (those satisfying the 'chaotic hypothesis'), the linear response away from equilibrium is very similar to the linear response close to equilibrium: the Kramers-Kronig dispersion relations hold, and the fluctuation-dispersion theorem survives in a modified form (which takes into account the oscillations around the 'attractor' corresponding to the NESS). If the chaotic hypothesis does not hold, two new phenomena may arise. The first is a violation of linear response in the sense that the NESS does not depend differentiably on parameters (but this nondifferentiability may be hard to see experimentally). The second phenomenon is a violation of the dispersion relations: the susceptibility has singularities in the upper half complex plane. These 'acausal' singularities are actually due to 'energy nonconservation': for a small periodic perturbation of the system, the amplitude of the linear response is arbitrarily large. This means that the NESS of the dynamical system under study is not 'inert' but can give energy to the outside world. An 'active' NESS of this sort is very different from an equilibrium state, and it would be interesting to see what happens for active states to the Gallavotti-Cohen fluctuation theorem.

  16. Convergence analysis for general linear methods applied to stiff delay differential equations

    Institute of Scientific and Technical Information of China (English)

    2002-01-01

    For Runge-Kutta methods applied to stiff delay differential equations (DDEs), the concept of D-convergence was proposed, which is an extension to that of B-convergence in ordinary differential equations (ODEs). In this paper, D-convergence of general linear methods is discussed and the previous related results are improved. Some order results to determine D-convergence of the methods are obtained.

  17. Damping of a system of linear oscillators using the generalized dry friction

    OpenAIRE

    Ovseevich, Alexander; Fedorov, Aleksey

    2015-01-01

    The problem of damping a system of linear oscillators is considered. The problem is solved by using a control in the form of dry friction. The motion of the system under the control is governed by a system of differential equations with discontinuous right-hand side. A uniqueness and continuity theorem is proved for the phase flow of this system. Thus, the control in the form of generalized dry friction defines the motion of the system of oscillators uniquely.

  18. Representations of general linear groups and categorical actions of Kac-Moody algebras

    OpenAIRE

    Losev, Ivan

    2012-01-01

    This is an expanded version of the lectures given by the author on the 3rd school "Lie algebras, algebraic groups and invariant theory" in Togliatti, Russia. In these notes we explain the concept of a categorical Kac-Moody action by studying an example of the category of rational representations of a general linear group in positive characteristic. We also deal with some more advanced topics: a categorical action on the polynomial representations and crystals of categorical actions.

  19. An Average Linear Difference Scheme for the Generalized Rosenau-KdV Equation

    Directory of Open Access Journals (Sweden)

    Maobo Zheng

    2014-01-01

    Full Text Available An average linear finite difference scheme for the numerical solution of the initial-boundary value problem of Generalized Rosenau-KdV equation is proposed. The existence, uniqueness, and conservation for energy of the difference solution are proved by the discrete energy norm method. It is shown that the finite difference scheme is 2nd-order convergent and unconditionally stable. Numerical experiments verify that the theoretical results are right and the numerical method is efficient and reliable.

  20. Solution to the Generalized Champagne Problem on simultaneous stabilization of linear systems

    Institute of Scientific and Technical Information of China (English)

    2007-01-01

    The well-known Generalized Champagne Problem on simultaneous stabilization of linear systems is solved by using complex analysis and Blondel's technique. We give a complete answer to the open problem proposed by Patel et al., which automatically includes the solution to the original Champagne Problem. Based on the recent development in automated inequality-type theorem proving, a new stabilizing controller design method is established. Our numerical examples significantly improve the relevant results in the literature.