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Sample records for genera ascochyta lib

  1. Occurrence of pathotypes of Ascochyta pisi (Lib. in the Olsztyn district

    Directory of Open Access Journals (Sweden)

    Helena Furgał-Węgrzycka

    2013-12-01

    Full Text Available The causal agents of leaf and pods spot-pot of peas and field peas in the Olsztyn district was the fungus Ascochyta pisi (Lib.. Investigated isolates of A. pisi differed by macroscopic and microscopic features. From diseases leaves and pods of peas and field peas obtained also saprophitic fungi among which Alternaria alternata, Botrytis cinerea, Cladosporium c1adosporioides, Epicoccum purpurascens, Stemphylium botryosum, Sordaria fimicola and mycelia starilia were dominated. In the study of the identification and distribution of pathotypes of A. pisi five pathotypes were identified among which pathotype 2 were dominated. The identified the pathotypes differed by macroscopic and microscopic features.

  2. Studies on the susceptibility of peas and field peas cultivars to Ascochyta pisi (Lib.

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    Helena Furgał-Węgrzycka

    2013-12-01

    Full Text Available The aim of the work was to find the plants resistant to Ascochyta pisi causing leaf and spot-pot of peas and field peas. Fourty five cultivars of peas and field peas and 6 breeding materials were tested in field in the period 1975-1978. Cultivars: Bartel, Birte, Borek, Cebeco, Finale and Paloma were to be less susceptible. In laboratory and greenhouse conditions peas and field peas cultivares were examined for susceptible to pathotypes 2 and 4 of Ascochyta pisi. The results obtained proved that cultivars: Borel, cebeco, Finale and Paloma were to be less susceptible to two pathotypes of Ascochyta pisi.

  3. Accumulation of defence-related transcripts and cloning of a chitinase mRNA from pea leaves (Pisum sativum L.) inoculated with Ascochyta pisi Lib

    DEFF Research Database (Denmark)

    Vad, Knud; de Neergaard, Eigil; Madriz-Ordeñana, Kenneth

    1993-01-01

    The race specific resistance of pea to Ascochyta pisi Lib. was shown to be exhibited as a hypersensitive response associated with the production of polyphenolic substances in epidermal and mesophyll cells. The levels of transcripts representing a pathogenesis-related (PR) protein (chitinase......) and an enzyme of phytoalexin biosynthesis (chalcone synthase) were shown to accumulate more rapidly during the hypersensitive response than during lesion development in the compatible interaction. A full-length (1143 bp) cDNA sequence of a pea chitinase (EC 3.2.1.14) (coding for an approx. 34 500 Da protein......) was deduced by combining the overlapping sequences of three clones obtained following PCR amplification of cDNA prepared from mRNA isolated 24 h after inoculation of pea leaves with Ascochyta pisi. The combined sequences were identified as a class I chitinase corresponding to the basic A1-chitinase enzyme...

  4. Notes on some species of Ascochyta (Coelomycetes new and rare for Poland

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    Monika Kozłowska

    2014-08-01

    Full Text Available Three species of Ascochyta (conidial fungi, Coelomycetes are described in the paper. Ascochyta urticae A. L. Smith et Ramsbottom (on Urtica dioica L. and Ascochyta phomoides Saccardo (on Aegopodium podagraria L. are species new for Poland. Ascochyta podagrariae Bresadola (on A. podagraria L. is known from one locality only. All species are rarely noted in the world.

  5. Genotype-Dependent Interaction of Lentil Lines with Ascochyta lentis

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    Ehsan Sari

    2017-05-01

    Full Text Available Ascochyta blight of lentil is a prevalent disease in many lentil producing regions and can cause major yield and grain quality losses. The most environmentally acceptable and economically profitable method of control is to develop varieties with high levels of durable resistance. Genetic studies to date suggest that ascochyta blight resistance genes (R-gene in lentil lines CDC Robin, ILL 7537, 964a-46, and ILL 1704 are non-allelic. To understand how different R-genes manifest resistance in these genotypes and an accession of Lens ervoides, L-01-827A, with high level of resistance to ascochyta blight, cellular and molecular defense responses were compared after inoculation with the causal pathogen Ascochyta lentis. Pathogenicity testing of the resistant lines to A. lentis inoculation revealed significantly lower disease severity on CDC Robin and ILL 7537 compared to ILL 1704 and 964a-46, and no symptoms of disease were observed on L-01-827A. Histological examinations indicated that cell death triggered by the pathogen might be disrupted as a mechanism of resistance in CDC Robin. In contrast, limiting colonization of epidermal cells by A. lentis is a suggested mechanism of resistance in 964a-46. A time-series comparison of the expressions of hallmark genes in salicylic acid (SA and jasmonic acid (JA signal transduction pathways between CDC Robin and 964a-46 was conducted. These partially resistant genotypes differed in the timing and the magnitude of SA and JA signaling pathway activation. The SA signaling pathway was only triggered in 964a-46, whereas the JA pathway was triggered in both partially resistant genotypes CDC Robin and 964a-46. The expression of JA-associated genes was lower in 964a-46 than CDC Robin. These observations corroborate the existence of diverse ascochyta blight resistance mechanisms in lentil genotypes carrying different R-genes.

  6. Sources of resistance in chickpea (cicer arietinum l.) land races against ascochyta rabiei causal agent of ascochyta blight disease

    International Nuclear Information System (INIS)

    Duzdemir, O.; Selvi, B.; Yanar, Y.

    2014-01-01

    Ascochyta blight disease, caused by the fungus Ascochyta rabiei, is a major yield limiting factor of chickpea in Turkey and around the world. This study was conducted to identify sources of genetic resistance against chickpea blight caused by Ascochyta rabiei. For this purpose, 68 chickpea land races of different origins were evaluated in both field and growth chamber conditions during 2008-2009 growing seassons. Two standard cultivars were used as a reference, Inci (resistant) and Canitez (susceptible). Disease severity scoring was conducted on a 1-9 rating scale 21 days after inoculation in growth chamber test and at flowering and pot filling stages in field tests. Analysis of variance (ANOVA) test showed a significant difference among the chickpea landraces in ascochyta blight resistance at p<0.05. None of the chickpea land races was highly resistant to the pathogen in growth chamber and field conditions. Only two landraces (10A and 28B) were moderately resistant to the disease. Some of the landraces resulted in a particular plant to exhibit no disease symptoms, indicating that the variation within chickpea land races was high. Therefore, seeds of this plant were harvested separately and preserved for further evaluations. (author)

  7. The effect of nutrient media water purity on LIBS based identification of bacteria

    Science.gov (United States)

    Single pulse laser induced breakdown spectroscopy (LIBS) is used as the basis for discrimination between 3 genera of Gram-negative bacteria and 2 genera of gram-positive bacteria representing pathogenic threats commonly found in poultry processing rinse waters. Because LIBS-based discrimination reli...

  8. Preservation methods for isolates of ascochyta blight fungi

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    Joanna Marcinkowska

    2014-08-01

    Full Text Available Isolates of ascochyta blight fungi, two of Ascochyta pisi, four of Mycosphaerella pinodes and four of Phoma pinodella were stored: A - on slants under mineral oil, B - on CN's medium agar disks, and as conidial suspension: C - in glycerine, D · in water. Viability and pathogenicity of recovered cultures after each consecutive year were assesed from 1991 to 1999. The compared parameters were first of all strongly influenced by the preservation method, but fungus species and number of years had a minor importance. The best for longer storage was method "A" because after 9 years the isolates were viable, highly pathogenic, and cultures recovered from them were clean. Thc method "C'' is good for short keeping (2-3 years, as conidia in vials need only small space and gave clean cultures.

  9. An Update on Genetic Resistance of Chickpea to Ascochyta Blight

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    Mamta Sharma

    2016-03-01

    Full Text Available Ascochyta blight (AB caused by Ascochyta rabiei (Pass. Labr. is an important and widespread disease of chickpea (Cicer arietinum L. worldwide. The disease is particularly severe under cool and humid weather conditions. Breeding for host resistance is an efficient means to combat this disease. In this paper, attempts have been made to summarize the progress made in identifying resistance sources, genetics and breeding for resistance, and genetic variation among the pathogen population. The search for resistance to AB in chickpea germplasm, breeding lines and land races using various screening methods has been updated. Importance of the genotype × environment (GE interaction in elucidating the aggressiveness among isolates from different locations and the identification of pathotypes and stable sources of resistance have also been discussed. Current and modern breeding programs for AB resistance based on crossing resistant/multiple resistant and high-yielding cultivars, stability of the breeding lines through multi-location testing and molecular marker-assisted selection method have been discussed. Gene pyramiding and the use of resistant genes present in wild relatives can be useful methods in the future. Identification of additional sources of resistance genes, good characterization of the host–pathogen system, and identification of molecular markers linked to resistance genes are suggested as the key areas for future study.

  10. ZoneLib

    DEFF Research Database (Denmark)

    Jessen, Jan Jacob; Schiøler, Henrik

    2006-01-01

    We present a dynamic model for climate in a livestock building divided into a number of zones, and a corresponding modular Simulink library (ZoneLib). While most literature in this area consider air flow as a control parameter we show how to model climate dynamics using actual control signals...... development of ZoneLib....

  11. Genetic mapping of ascochyta blight resistance in chickpea (Cicer arietinum L.) using a simple sequence repeat linkage map.

    Science.gov (United States)

    Tar'an, B; Warkentin, T D; Tullu, A; Vandenberg, A

    2007-01-01

    Ascochyta blight, caused by the fungus Ascochyta rabiei (Pass.) Lab., is one of the most devastating diseases of chickpea (Cicer arietinum L.) worldwide. Research was conducted to map genetic factors for resistance to ascochyta blight using a linkage map constructed with 144 simple sequence repeat markers and 1 morphological marker (fc, flower colour). Stem cutting was used to vegetatively propagate 186 F2 plants derived from a cross between Cicer arietinum L. 'ICCV96029' and 'CDC Frontier'. A total of 556 cutting-derived plants were evaluated for their reaction to ascochyta blight under controlled conditions. Disease reaction of the F1 and F2 plants demonstrated that the resistance was dominantly inherited. A Fain's test based on the means and variances of the ascochyta blight reaction of the F3 families showed that a few genes were segregating in the population. Composite interval mapping identified 3 genomic regions that were associated with the reaction to ascochyta blight. One quantitative trait locus (QTL) on each of LG3, LG4, and LG6 accounted for 13%, 29%, and 12%, respectively, of the total estimated phenotypic variation for the reaction to ascochyta blight. Together, these loci controlled 56% of the total estimated phenotypic variation. The QTL on LG4 and LG6 were in common with the previously reported QTL for ascochyta blight resistance, whereas the QTL on LG3 was unique to the current population.

  12. Evaluation of chickpea genotypes for resistance to Ascochyta blight (Ascochyta rabiei disease in the dry highlands of Kenya

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    Paul K. KIMURTO

    2013-05-01

    Full Text Available Chickpea (Cicer arietinum is an edible legume grown widely for its nutritious seed, which is rich in protein, minerals, vitamins and dietary fibre. It’s a new crop in Kenya whose potential has not been utilized fully due to abiotic and biotic stresses that limit its productivity. The crop is affected mainly by Ascochyta blight (AB which is widespread in cool dry highlands causing up to 100% yield loss. The objective of this study was to evalu- ate the resistance of selected chickpea genotypes to AB in dry highlands of Kenya. The study was done in 2 sites (Egerton University-Njoro and Agricultural Training centre-ATC-Koibatek for one season during long rains of 2010/2011 growing season. Thirty six genotypes from reference sets and mini-core samples introduced from ICR- SAT were evaluated. There were significant (P<0.001 differences in AB responses and grain yield performance in test genotypes in both sites. AB was more severe at Egerton-Njoro (mean score 5.7 than ATC-Koibatek (mean score 4.25, with subsequent low grain yield. Genotypes ICC7052, ICC4463, ICC4363, ICC2884, ICC7150, ICC15294 and ICC11627 had both highest grain yield in decreasing order (mean range 1790-1053 Kg ha-1 and best resist- ance to AB. Further evaluation is needed in other multi-locations and their use in breeding program determined especially because of their undesirable black seed color. Commercial varieties (LDT068, LDT065, Chania desi 1, and Saina K1 were all susceptible to AB, but with grain yield >1200 Kg ha-1. The findings of the study showed that chickpea should be sown during the short rains (summer in the dry highlands of Kenya when conditions are drier and warmer and less favorable for AB infection. However yield could be increased by shifting the sowing date from dry season to long rain (winter thus avoiding terminal drought if AB resistant cultivars with acceptable agronomic traits could be identified.

  13. Genera of phytopathogenic fungi

    NARCIS (Netherlands)

    Marin-Felix, Y.; Hernández-Restrepo, Margarita; Wingfield, M.J.; Akulov, A.; Carnegie, A.J.; Cheewangkoon, R.; Gramaje, D.; Groenewald, J.Z.; Guarnaccia, V.; Halleen, F.; Lombard, L.; Luangsa-ard, J.; Marincowitz, S.; Moslemi, A.; Mostert, L.; Quaedvlieg, W.; Schumacher, R.K.; Spies, C.F.J.; Thangavel, R.; Taylor, P.W.J.; Wilson, A.M.; Wingfield, B.D.; Wood, A.R.; Crous, P.W.

    2019-01-01

    This paper represents the second contribution in the Genera of Phytopathogenic Fungi (GOPHY) series. The series provides morphological descriptions and information regarding the pathology, distribution, hosts and disease symptoms for the treated genera. In addition, primary and secondary DNA

  14. Lathyrus sativus transcriptome resistance response to Ascochyta lathyri investigated by deepSuperSAGE analysis

    Science.gov (United States)

    Almeida, Nuno F.; Krezdorn, Nicolas; Rotter, Björn; Winter, Peter; Rubiales, Diego; Vaz Patto, Maria C.

    2015-01-01

    Lathyrus sativus (grass pea) is a temperate grain legume crop with a great potential for expansion in dry areas or zones that are becoming more drought-prone. It is also recognized as a potential source of resistance to several important diseases in legumes, such as ascochyta blight. Nevertheless, the lack of detailed genomic and/or transcriptomic information hampers further exploitation of grass pea resistance-related genes in precision breeding. To elucidate the pathways differentially regulated during ascochyta-grass pea interaction and to identify resistance candidate genes, we compared the early response of the leaf gene expression profile of a resistant L. sativus genotype to Ascochyta lathyri infection with a non-inoculated control sample from the same genotype employing deepSuperSAGE. This analysis generated 14.387 UniTags of which 95.7% mapped to a reference grass pea/rust interaction transcriptome. From the total mapped UniTags, 738 were significantly differentially expressed between control and inoculated leaves. The results indicate that several gene classes acting in different phases of the plant/pathogen interaction are involved in the L. sativus response to A. lathyri infection. Most notably a clear up-regulation of defense-related genes involved in and/or regulated by the ethylene pathway was observed. There was also evidence of alterations in cell wall metabolism indicated by overexpression of cellulose synthase and lignin biosynthesis genes. This first genome-wide overview of the gene expression profile of the L. sativus response to ascochyta infection delivered a valuable set of candidate resistance genes for future use in precision breeding. PMID:25852725

  15. Lathyrus sativus transcriptome resistance response to Ascochyta lathyri as reviewed by deepSuperSAGE analysis

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    Nuno Felipe Almeida

    2015-03-01

    Full Text Available Lathyrus sativus (grass pea is a temperate grain legume crop with a great potential for expansion in dry areas or zones that are becoming more drought-prone. It is also recognized as a potential source of resistance to several important diseases in legumes, such as ascochyta blight. Nevertheless, the lack of detailed genomic and/or transcriptomic information hampers further exploitation of grass pea resistance-related genes in precision breeding. To elucidate the pathways differentially regulated during ascochyta-grass pea interaction and to identify resistance candidate genes, we compared the early response of the leaf gene expression profile of a resistant L. sativus genotype to Ascochyta lathyri infection with a non-inoculated control sample from the same genotype employing deepSuperSAGE. This analysis generated 14.387 UniTags of which 95.7% mapped to a reference grass pea/rust interaction transcriptome. From the total mapped UniTags, 738 were significantly differentially expressed between control and inoculated leaves. The results indicate that several gene classes acting in different phases of the plant/pathogen interaction are involved in the L. sativus response to A. lathyri infection. Most notably a clear up-regulation of defense-related genes involved in and/or regulated by the ethylene pathway was observed. There was also evidence of alterations in cell wall metabolism indicated by overexpression of cellulose synthase and lignin biosynthesis genes. This first genome-wide overview of the gene expression profile of the L. sativus response to ascochyta infection delivered a valuable set of candidate resistance genes for future use in precision breeding.

  16. Ocorrência e sintomas da mancha de Ascochyta em feijão-vagem Occurrence and symptoms of Ascochyta blight on snap bean

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    Maria Aparecida de Souza Tanaka

    1996-01-01

    Full Text Available A mancha de ascochita (Ascochyta phaseolorum Sacc. foi identificada como uma das principais doenças do feijão-vagem (Phaseolus vulgaris L., na região de Itatiba (SP, em levantamento realizado de abril de 1991 a março de 92. Seus sintomas são manchas foliares arredondadas, tipicamente zonadas e de tamanho variável, necrosando, às vezes, extensas áreas do limbo e provocando desfolha prematura. Associado a esse sintoma foliar, o patógeno pode causar lesões nas hastes, pecíolos e vagens, assumindo proporções severas. As lesões necróticas das hastes podem estrangula-las e provocar a morte da planta acima da região afetada. Nas vagens, as lesões tendem a ser circulares e zonadas, como as das folhas, porém os anéis concêntricos são menos evidentes. Isolamentos, características culturais e morfológicas e testes de patogenicidade permitiram diagnosticar a moléstia, que vinha sendo confundida com a mancha foliar de alternária, ou com a podridão de macrofomina, quando atacava a parte inferior da haste. A identificação do patógeno, por ter permitido o diagnóstico preciso da doença. poderá embasar o emprego de métodos adequados de controle.A severe Ascochyta blight (Ascochyta phaseolorum Sacc., was found during a survey carried out in farmer's fields of snap bean (Phaseolus vulgaris L. at Itatiba county, São Paulo State, Brazil. Foliar lesions were usually circular to irregular shaped, brown to dark brown and usually contained concentric circles of picnidia. These lesions often blighted the entire leaves, that die and fall. The pathogen also infected the stems, petioles and pods, and the disease incidence ranged from trace to severe. The stems and petioles lesions were elongated and cankerous, often girdling them, killing the plant above the infected region. The pod lesions were initially circular and zonate, as the foliar spots, but the concentric circles are of little evidence. Diagnosis were confirmed by isolation

  17. Using LIBS Method in Safeguards

    International Nuclear Information System (INIS)

    Kovacs-Szeles, E.; Almasi, I.

    2015-01-01

    Laser-Induced Breakdown Spectroscopy (LIBS) is a type of atomic emission spectroscopic technique which is capable to detect almost all the elements from the periodic table in different sample types (solid, liquid or gas). Other advantage of the technique is that a LIBS analysis is much faster than a conventional laboratory technique. Beside the easy usability and fastness of the system the main advantages of the technique is that portable systems are also available. Using a so-called ''backpack'' version in-field analysis can be carried out. Therefore, LIBS is a more and more popular technique also e.g., in the nuclear analytics due to its several advantages. It is also tested for Safeguards purposes as a novel technology. In this work development and test of a portable LIBS system is discussed in detail. Detector system with higher resolution and specific software for evaluation of uranium isotope composition has been developed. Different kind of uranium fuel pellets with various enrichments was analyzed as test samples. Concerning the test measurements the developed LIBS instrument was found well-applicable for analysis of Safeguards samples and determination of higher enrichment of uranium in-field. The method is rapid and simple enough for short in-field sample analysis. (author)

  18. Occurrence of pathotypes of Ascochyta pinodes (Jones in the Olsztyn district

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    Helena Furgał-Węgrzycka

    2013-12-01

    Full Text Available The causal agent of leaf and pods spot-pot of peas and field peas in the Olsztyn district was the fungus Ascochyta pinodes (Jones. Investigated isolates of A. pinoides different by macroscopic and microscopic features. From diseased leaves and pods of peas and field peas saprophytic fungi were also obtained. Among them Alternaria alternata, Cladosporium cladosporioides, Epicoccum purpurascens, Stemphylium botryosum, Sordaria fimicola and mycelia sterilia were dominant. In the study on the identification and distribution of pathotypes of A. pinodes (Jones six pathotypes were identified among which pathotypes 3 dominated. The identified pathotypes differed by macroscopic and microscopic features.

  19. Laboratory invesitgations of variability of Ascochyta fabae Speg. isolates obtained from horse bean

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    Antoni Józef Filipowicz

    2014-08-01

    Full Text Available Fifty five isolates of Ascochyta fabae Speg. were investigated. They were selected from 1650 isolates of this fungus obtained from horse bean seeds in 1974-1976. All the isolates grew and sporulated on Potato Dextrose Agar, Malt Agar and Horse Bean Agar. The rate of their growth amounted to 1-4 mm per 24 hours. The variability of isolates in size of pycnidia and conidia and number of sepia was noticed. A few spores with untypical shapes were observed as well.

  20. Effects of nitrogen availability and spore concentration on the biocontrol activity of Ascochyta caulina in common lambsquarters (Chenopodium album)

    NARCIS (Netherlands)

    Ghorbani, R.; Scheepens, P.C.; Zweerde, van der W.; Leifert, C.; McDonald, A.J.S.; Seel, W.

    2002-01-01

    Common lambsquarters is an annual weed of many important crops. Ascochyta caulina is a plant pathogenic fungus that causes necrotic lesions on the leaves and stems of common lambsquarters. The objective of the present study was to estimate the effect of plant N supply on the biocontrol activity of

  1. Future prospects for ascochyta blight resistance breeding in cool season food legumes

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    Diego eRubiales

    2012-02-01

    Full Text Available Legume cultivation is strongly hampered by the occurrence of ascochyta blights. Strategies of control have been developed but only marginal successes have been achieved. Breeding for disease resistance is regarded the most cost efficient method of control. Significant genetic variation for disease resistance exists in most legume crops with numerous germplasm lines maintained, providing an excellent resource for plant breeders. Fast and reliable screening methods have been adjusted to fulfil breeding programmes needs. However, the complex inheritance controlled quantitatively by multiple genes, have been difficult to manipulate. Successful application of biotechnology to ascochyta blight resistance breeding in legume crops will facilitate both a good biological knowledge of the crops and of the mechanisms underlying resistance. The current focus in applied breeding is leveraging biotechnological tools to develop more and better markers to speed up the delivery of improved cultivars to the farmer. To date, however, progress in marker development and delivery of useful markers has been slow. The limited saturation of the genomic regions bearing putative QTLs in legume crops makes difficult to identify the most tightly-linked markers

  2. Underwater inverse LIBS (iLIBS) for marine archaeology

    Science.gov (United States)

    Asmus, J.; Magde, M.; Elford, J.; Magde, D.; Parfenov, V.

    2013-05-01

    In recent years there have been enormous advances in nautical archaeology through developments in SONAR technologies as well as in manned and robotic submersible vehicles. The number of sunken vessel discoveries has escalated in many of the seas of the world in response to the widespread application of these and other new tools. Customarily, surviving artifacts within the debris field of a wreck are collected and then moved to laboratories, centers, or institutions for analyses and possible conservation. Frequently, the conservation phase involves chemical treatments to stabilize an artefact to standard temperature, pressure, and humidity instead of an undersea environment. Many of the artefacts encountered at an underwater site are now characterized and restored in-situ in accordance with modern trends in art conservation. Two examples of this trend are exemplified by the resting place of the wreck of the Titanic in the Atlantic and the Cancun Underwater Park in the Caribbean Sea. These two debris fields have been turned into museums for diving visitors. Several research groups have investigated the possibility of adapting the well-established analytical tool Laser Induced Breakdown Spectroscopy (LIBS) to in-situ elemental analyses of underwater cultural, historic, and archaeological artefacts where discovered, rather than as a phase of a salvage operation. As the underwater laser ablation associated with LIBS generates a "snowplough" shockwave within the aqueous matrix, the atomic emission spectrum is usually severely attenuated in escaping from the target. Consequently, probative experiments to date generally invoke a submerged air chamber or air jet to isolate water from the interaction zone as well as employ more complex double-pulse lasers. These measures impose severe logistical constraints on the examination of widely dispersed underwater artefacts. In order to overcome this constraint we report on water-immersion LIBS experiments performed with oblique

  3. Downhole Elemental Analysis with LIBS

    Science.gov (United States)

    Moreschini, Paolo; Zacny, Kris; Rickman, Doug

    2011-01-01

    In this paper we discuss a novel instrument, currently under development at Honeybee Robotics with SBIR funding from NASA. The device is designed to characterize elemental composition as a function of depth in non-terrestrial geological formations. The instrument consists of a miniaturized laser-induced breakdown spectrometer (LIBS) analyzer integrated in a 2" diameter drill string. While the drill provides subsurface access, the LIBS analyzer provides information on the elemental composition of the borehole wall. This instrument has a variety of space applications ranging from exploration of the Moon for which it was originally designed, to Mars, as well as a variety of terrestrial applications. Subsurface analysis is usually performed by sample acquisition through a drill or excavator, followed by sample preparation and subsequent sample presentation to an instrument or suite of instruments. An alternative approach consisting in bringing a miniaturized version of the instrument to the sample has many advantages over the traditional methodology, as it allows faster response, reduced probability of cross-contamination and a simplification in the sampling mechanisms. LIBS functions by focusing a high energy laser on a material inducing a plasma consisting of a small fraction of the material under analysis. Optical emission from the plasma, analyzed by a spectrometer, can be used to determine elemental composition. A triangulation sensor located in the sensor head determines the distance of the sensor from the borehole wall. An actuator modifies the position of the sensor accordingly, in order to compensate for changes due to the profile of the borehole walls. This is necessary because LIBS measurements are negatively affected by changes in the relative position of the focus of the laser with respect to the position of the sample (commonly referred to as the "lens to sample distance"). Profiling the borehole is done by adjusting the position of the sensor with a

  4. Effect of Atmospheric Conditions on LIBS Spectra

    OpenAIRE

    Effenberger, Andrew J.; Scott, Jill R.

    2010-01-01

    Laser-induced breakdown spectroscopy (LIBS) is typically performed at ambient Earth atmospheric conditions. However, interest in LIBS in other atmospheric conditions has increased in recent years, especially for use in space exploration (e.g., Mars and Lunar) or to improve resolution for isotopic signatures. This review focuses on what has been reported about the performance of LIBS in reduced pressure environments as well as in various gases other than air.

  5. Effect of Atmospheric Conditions on LIBS Spectra

    Science.gov (United States)

    Effenberger, Andrew J.; Scott, Jill R.

    2010-01-01

    Laser-induced breakdown spectroscopy (LIBS) is typically performed at ambient Earth atmospheric conditions. However, interest in LIBS in other atmospheric conditions has increased in recent years, especially for use in space exploration (e.g., Mars and Lunar) or to improve resolution for isotopic signatures. This review focuses on what has been reported about the performance of LIBS in reduced pressure environments as well as in various gases other than air. PMID:22399914

  6. mQTL-seq and classical mapping implicates the role of an AT-HOOK MOTIF CONTAINING NUCLEAR LOCALIZED (AHL) family gene in Ascochyta blight resistance of chickpea.

    Science.gov (United States)

    Kumar, Kamal; Purayannur, Savithri; Kaladhar, Vemula Chandra; Parida, Swarup Kumar; Verma, Praveen Kumar

    2018-03-01

    Ascochyta blight (AB) caused by the fungal pathogen Ascochyta rabiei is a serious foliar disease of chickpea (Cicer arietinum L.). Despite many genetic studies on chickpea-Ascochyta interaction, genome-wide scan of chickpea for the identification of AB-associated quantitative trait loci (QTLs) and their gene(s) has not been accomplished. To elucidate narrow QTLs for AB resistance, here, we report the use of multiple QTL-sequencing approach on 2 sets of extreme AB phenotype bulks derived from Cicer intraspecific and interspecific crosses. Two major QTLs, qABR4.1 and qABR4.2, and a minor QTL, qABR4.3, were identified on assembled chickpea pseudomolecule 4. We narrowed qABR4.1 to a "robust region" at 4.568-4.618 Mb through mapping on a larger intraspecific cross-derived population and comparative analysis. Among 4 genes, the CaAHL18 gene showed higher expression under Ascochyta stress in AB resistant parent suggesting that it is the candidate gene under "robust qABR4.1." Dual-luciferase assay with CaAHL18 polymorphic cis-regulatory sequences showed that allelic variation is associated with higher expression. Thus, our findings on chickpea-Ascochyta interaction have narrowed down AB resistance associated QTLs on chickpea physical map. The narrowed QTLs and gene-associated markers will help in biotechnological and breeding programs for chickpea improvement. © 2018 John Wiley & Sons Ltd.

  7. Combining Ascochyta blight and Botrytis grey mould resistance in chickpea through interspecific hybridization

    Directory of Open Access Journals (Sweden)

    Livinder KAUR

    2013-05-01

    Full Text Available Ascochyta blight (AB caused by Ascochyta rabiei (Pass. Labr. and Botrytis grey mould (BGM caused by Botrytis cinerea (Pers. ex Fr. are important diseases of the aerial plant parts of chickpea in most chickpea growing areas of the world. Although conventional approaches have contributed to reducing disease, the use of new technologies is expected to further reduce losses through these biotic stresses. Reliable screening techniques were developed: ‘field screening technique’ for adult plant screening, ‘cloth chamber technique’ and ‘growth chamber technique’ for the study of races of the pathogen and for segregating generations. Furthermore, the ‘cut twig technique’ for interspecific population for AB and BGM resistance was developed. For introgression of high levels of AB and BGM resistance in cultivated chickpea from wild relatives, accessions of seven annual wild Cicer spp. were evaluated and identified: C. judaicum accessions 185, ILWC 95 and ILWC 61, C. pinnatifidum accessions 188, 199 and ILWC 212 as potential donors. C. pinnatifidum accession188 was crossed with ICCV 96030 and 62 F9 lines resistant to AB and BGM were derived. Of the derived lines, several are being evaluated for agronomic traits and yield parameters while four lines, GL 29029, GL29206, GL29212, GL29081 possessing high degree of resistance were crossed with susceptible high yielding cultivars BG 256 to improve resistance and to undertake molecular studies. Genotyping of F2 populations with SSR markers from the chickpea genome was done to identify markers potentially linked with AB and BGM resistance genes. In preliminary studies, of 120 SSR markers used, six (Ta 2, Ta 110, Ta 139, CaSTMS 7, CaSTMS 24 and Tr 29 were identified with polymorphic bands between resistant derivative lines and the susceptible parent. The study shows that wild species of Cicer are the valuable gene pools of resistance to AB and BGM. The resistant derivative lines generated here can

  8. SNP-based linkage mapping for validation of QTLs for resistance to ascochyta blight in lentil

    Directory of Open Access Journals (Sweden)

    Shimna Sudheesh

    2016-11-01

    Full Text Available Lentil (Lens culinaris Medik. is a self-pollinating, diploid, annual, cool-season, food legume crop that is cultivated throughout the world. Ascochyta blight (AB, caused by Ascochyta lentis Vassilievsky, is an economically important and widespread disease of lentil. Development of cultivars with high levels of durable resistance provides an environmentally acceptable and economically feasible method for AB control. A detailed understanding of the genetic basis of AB resistance is hence highly desirable, in order to obtain insight into the number and influence of resistance genes. Genetic linkage maps based on single nucleotide polymorphisms (SNP and simple sequence repeat (SSR markers have been developed from three recombinant inbred line (RIL populations. The IH x NF map contained 460 loci across 1461.6 cM, while the IH x DIG map contained 329 loci across 1302.5 cM and the third map, NF x DIG contained 330 loci across 1914.1 cM. Data from these maps were combined with a map from a previously published study through use of bridging markers to generate a consensus linkage map containing 689 loci distributed across 7 linkage groups (LGs, with a cumulative length of 2429.61 cM at an average density of one marker per 3.5 cM. Trait dissection of AB resistance was performed for the RIL populations, identifying totals of two and three quantitative trait loci (QTLs explaining 52% and 69% of phenotypic variation for resistance to infection in the IH x DIG and IH x NF populations, respectively. Presence of common markers in the vicinity of the AB_IH1- and AB_IH2.1/AB_IH2.2-containing regions on both maps supports the inference that a common genomic region is responsible for conferring resistance and is associated with the resistant parent, Indianhead. The third QTL was derived from Northfield. Evaluation of markers associated with AB resistance across a diverse lentil germplasm panel revealed that the identity of alleles associated with AB_IH1 predicted

  9. Abstracts of oral and poster presentations given at the Ascochyta 2012 Workshop, Córdoba, Spain, 22–26 April 2012

    Directory of Open Access Journals (Sweden)

    Teresa Millan

    2013-05-01

    Full Text Available The third International Ascochyta Workshop was held in Córdoba, Spain 22 - 26 April 2012. This meeting was attended by 70 participants, and 33 oral presentations, 17 posters and 4 invited speeches were presented dealing with Ascochyta blights of the cool season food legumes (peas, lentils, chickpeas and faba beans. In addition, a special session was held on “Food legumes Research in North Africa”. Abstracts of the oral presentations and the posters of the congress are presented in this issue.

  10. Identification of Polymers by Means of LIBS

    Science.gov (United States)

    Anzano, Jesús M.; Bello-Gálvez, Cristina; Lasheras, Roberto J.

    Laser-induced breakdown spectroscopy (LIBS) is mainly an elemental analysis technique which is applied several fields. However, molecular materials are almost entirely atomized when exposed to intense laser radiation sufficient for breakdown. This limitation has been solved by researchers using statistical tools as chemometric techniques. In this chapter, the authors expose one review about the identification of polymeric materials using LIBS; and particularly, the different chemometric techniques.

  11. Evidence and Consequence of a Highly Adapted Clonal Haplotype within the Australian Ascochyta rabiei Population

    Directory of Open Access Journals (Sweden)

    Yasir Mehmood

    2017-06-01

    Full Text Available The Australian Ascochyta rabiei (Pass. Labr. (syn. Phoma rabiei population has low genotypic diversity with only one mating type detected to date, potentially precluding substantial evolution through recombination. However, a large diversity in aggressiveness exists. In an effort to better understand the risk from selective adaptation to currently used resistance sources and chemical control strategies, the population was examined in detail. For this, a total of 598 isolates were quasi-hierarchically sampled between 2013 and 2015 across all major Australian chickpea growing regions and commonly grown host genotypes. Although a large number of haplotypes were identified (66 through short sequence repeat (SSR genotyping, overall low gene diversity (Hexp = 0.066 and genotypic diversity (D = 0.57 was detected. Almost 70% of the isolates assessed were of a single dominant haplotype (ARH01. Disease screening on a differential host set, including three commonly deployed resistance sources, revealed distinct aggressiveness among the isolates, with 17% of all isolates identified as highly aggressive. Almost 75% of these were of the ARH01 haplotype. A similar pattern was observed at the host level, with 46% of all isolates collected from the commonly grown host genotype Genesis090 (classified as “resistant” during the term of collection identified as highly aggressive. Of these, 63% belonged to the ARH01 haplotype. In conclusion, the ARH01 haplotype represents a significant risk to the Australian chickpea industry, being not only widely adapted to the diverse agro-geographical environments of the Australian chickpea growing regions, but also containing a disproportionately large number of aggressive isolates, indicating fitness to survive and replicate on the best resistance sources in the Australian germplasm.

  12. Large-Scale Transcriptome Analysis in Faba Bean (Vicia faba L. under Ascochyta fabae Infection.

    Directory of Open Access Journals (Sweden)

    Sara Ocaña

    Full Text Available Faba bean is an important food crop worldwide. However, progress in faba bean genomics lags far behind that of model systems due to limited availability of genetic and genomic information. Using the Illumina platform the faba bean transcriptome from leaves of two lines (29H and Vf136 subjected to Ascochyta fabae infection have been characterized. De novo transcriptome assembly provided a total of 39,185 different transcripts that were functionally annotated, and among these, 13,266 were assigned to gene ontology against Arabidopsis. Quality of the assembly was validated by RT-qPCR amplification of selected transcripts differentially expressed. Comparison of faba bean transcripts with those of better-characterized plant genomes such as Arabidopsis thaliana, Medicago truncatula and Cicer arietinum revealed a sequence similarity of 68.3%, 72.8% and 81.27%, respectively. Moreover, 39,060 single nucleotide polymorphism (SNP and 3,669 InDels were identified for genotyping applications. Mapping of the sequence reads generated onto the assembled transcripts showed that 393 and 457 transcripts were overexpressed in the resistant (29H and susceptible genotype (Vf136, respectively. Transcripts involved in plant-pathogen interactions such as leucine rich proteins (LRR or plant growth regulators involved in plant adaptation to abiotic and biotic stresses were found to be differently expressed in the resistant line. The results reported here represent the most comprehensive transcript database developed so far in faba bean, providing valuable information that could be used to gain insight into the pathways involved in the resistance mechanism against A. fabae and to identify potential resistance genes to be further used in marker assisted selection.

  13. Holocene closure of Lib Pond, Marshall Islands.

    Directory of Open Access Journals (Sweden)

    Conor L Myhrvold

    Full Text Available Well-preserved sediment from closed water bodies of atolls such as Lib Pond are rare opportunities to reconstruct the past regional climate, which pieced together across a latitude and longitude range identify the range of movement patterns of wider scale climate phenomena such as the Intertropical Convergence Zone (ITCZ and El Niño Southern Oscillation (ENSO. We conducted the first physico-chemical survey of Lib Pond, a shallow, closed-water saline lake located on remote and difficult to access Lib Island in the Marshall Islands at 8° 18' 48.99″ N, 167 22' 51.90″ E in the Pacific Ocean, in July 2009. We performed a bathymetric survey, recorded salinity, dissolved oxygen, pH, and temperature profiles, monitored the tidal variability, and conducted a vegetation survey surrounding the lake. From bathymetric data we calculated the lake volume, which we used to estimate the lake's salt budget, and ultimately the residence time of water in the lake basin. We took a series of sediment cores from the lake, cores which indicate Lib Island's changing environment and climate. Radiocarbon measurements determined sediment age, and reveal significant mixing over the last 2 ka of deposition. We conclude that prior to 3 ka, Lib Island was an atoll with a central lagoon connected to the open ocean, which was then closed off from the open ocean to form the brackish system that exists today. We predict that the sediment accumulation in Lib Pond evident today will continue. As seawater is inhibited from exchanging with fresh water, Lib Pond will become a shallower lake with increasingly fresh water.

  14. Holocene closure of Lib Pond, Marshall Islands.

    Science.gov (United States)

    Myhrvold, Conor L; Janny, Fran; Nelson, Daniel; Ladd, S Nemiah; Atwood, Alyssa; Sachs, Julian P

    2014-01-01

    Well-preserved sediment from closed water bodies of atolls such as Lib Pond are rare opportunities to reconstruct the past regional climate, which pieced together across a latitude and longitude range identify the range of movement patterns of wider scale climate phenomena such as the Intertropical Convergence Zone (ITCZ) and El Niño Southern Oscillation (ENSO). We conducted the first physico-chemical survey of Lib Pond, a shallow, closed-water saline lake located on remote and difficult to access Lib Island in the Marshall Islands at 8° 18' 48.99″ N, 167 22' 51.90″ E in the Pacific Ocean, in July 2009. We performed a bathymetric survey, recorded salinity, dissolved oxygen, pH, and temperature profiles, monitored the tidal variability, and conducted a vegetation survey surrounding the lake. From bathymetric data we calculated the lake volume, which we used to estimate the lake's salt budget, and ultimately the residence time of water in the lake basin. We took a series of sediment cores from the lake, cores which indicate Lib Island's changing environment and climate. Radiocarbon measurements determined sediment age, and reveal significant mixing over the last 2 ka of deposition. We conclude that prior to 3 ka, Lib Island was an atoll with a central lagoon connected to the open ocean, which was then closed off from the open ocean to form the brackish system that exists today. We predict that the sediment accumulation in Lib Pond evident today will continue. As seawater is inhibited from exchanging with fresh water, Lib Pond will become a shallower lake with increasingly fresh water.

  15. Effect of Sample Preparation on the Discrimination of Bacterial Isolates Cultured in Liquid Nutrient Media Using Laser-Induced Breakdown Spectroscopy (LIBS).

    Science.gov (United States)

    Gamble, Gary R; Park, Bosoon; Yoon, Seung-Chul; Lawrence, Kurt C

    2016-03-01

    Laser-induced breakdown spectroscopy (LIBS) is used as the basis for discrimination between two genera of gram-negative bacteria and two genera of gram-positive bacteria representing pathogenic threats commonly found in poultry processing rinse waters. Because LIBS-based discrimination relies primarily upon the relative proportions of inorganic cell components including Na, K, Mg, and Ca, this study aims to determine the effects of trace mineral content and pH found in the water source used to isolate the bacteria upon the reliability of the resulting discriminant analysis. All four genera were cultured using tryptic soy agar (TSA) as the nutrient medium, and were grown under identical environmental conditions. The only variable introduced is the source water used to isolate the cultured bacteria. Cultures of each bacterium were produced using deionized (DI) water under two atmosphere conditions, reverse osmosis (RO) water, tap water, phosphate buffered saline (PBS) water, and TRIS buffered water. After 3 days of culture growth, the bacteria were centrifuged and washed three times in the same water source. Bacteria were then freeze dried, mixed with microcrystalline cellulose, and a pellet was made for LIBS analysis. Principal component analysis (PCA) was used to extract related variations in LIBS spectral data among the four bacteria genera and six water types used to isolate the bacteria, and Mahalanobis discriminant analysis (MDA) was used for classification. Results indicate not only that the four genera can be discriminated from each other in each water type, but that each genus can be discriminated by water type used for isolation. It is concluded that in order for LIBS to be a reliable and repeatable method for discrimination of bacteria grown in liquid nutrient media, care must be taken to insure that the water source used in purification of the culture be precisely controlled regarding pH, ionic strength, and proportionate amounts of mineral cations

  16. OML for the Libs+ system using PFW

    CERN Document Server

    Hahn, J A

    1999-01-01

    Passport for Windows (PFW) is not limited to accessing OCLC's systems. It can also access a local Libs+ system through the Internet. Such a connection makes it possible to use the automation capabilities of the OCLC Macro Language (OML), which is built into PFW, for the local Libs+ system. Once certain setup requirements have been completed, PFW can be used to quickly accomplish many routine tasks and thereby increase productivity and decrease error rates. Because it can be used to automate many local tasks, PFW remains an important tool for librarians. (0 refs).

  17. Transcription Factor Repertoire of Necrotrophic Fungal Phytopathogen Ascochyta rabiei: Predominance of MYB Transcription Factors As Potential Regulators of Secretome

    Directory of Open Access Journals (Sweden)

    Sandhya Verma

    2017-06-01

    Full Text Available Transcription factors (TFs are the key players in gene expression and their study is highly significant for shedding light on the molecular mechanisms and evolutionary history of organisms. During host–pathogen interaction, extensive reprogramming of gene expression facilitated by TFs is likely to occur in both host and pathogen. To date, the knowledge about TF repertoire in filamentous fungi is in infancy. The necrotrophic fungus Ascochyta rabiei, that causes destructive Ascochyta blight (AB disease of chickpea (Cicer arietinum, demands more comprehensive study for better understanding of Ascochyta-legume pathosystem. In the present study, we performed the genome-wide identification and analysis of TFs in A. rabiei. Taking advantage of A. rabiei genome sequence, we used a bioinformatic approach to predict the TF repertoire of A. rabiei. For identification and classification of A. rabiei TFs, we designed a comprehensive pipeline using a combination of BLAST and InterProScan software. A total of 381 A. rabiei TFs were predicted and divided into 32 fungal specific families of TFs. The gene structure, domain organization and phylogenetic analysis of abundant families of A. rabiei TFs were also carried out. Comparative study of A. rabiei TFs with that of other necrotrophic, biotrophic, hemibiotrophic, symbiotic, and saprotrophic fungi was performed. It suggested presence of both conserved as well as unique features among them. Moreover, cis-acting elements on promoter sequences of earlier predicted A. rabiei secretome were also identified. With the help of published A. rabiei transcriptome data, the differential expression of TF and secretory protein coding genes was analyzed. Furthermore, comprehensive expression analysis of few selected A. rabiei TFs using quantitative real-time polymerase chain reaction revealed variety of expression patterns during host colonization. These genes were expressed in at least one of the time points tested post

  18. Overview of applications of Laser-Induced Breakdown Spectroscopy (LIBS)

    International Nuclear Information System (INIS)

    Cremers, D.A.

    1987-01-01

    Laser-induced breakdown spectroscopy (LIBS) is a method of performing elemental analyses of solids, liquids, and gases using the microplasma produced by a focused laser pulse. Because the microplasma is formed by optical radiation, LIBS has some important advantages compared to conventional laboratory based analytical methods. Three applications are discussed which use the LIBS method. 6 refs., 8 figs., 2 tabs

  19. LIBS analysis of artificial calcified tissues matrices.

    Science.gov (United States)

    Kasem, M A; Gonzalez, J J; Russo, R E; Harith, M A

    2013-04-15

    In most laser-based analytical methods, the reproducibility of quantitative measurements strongly depends on maintaining uniform and stable experimental conditions. For LIBS analysis this means that for accurate estimation of elemental concentration, using the calibration curves obtained from reference samples, the plasma parameters have to be kept as constant as possible. In addition, calcified tissues such as bone are normally less "tough" in their texture than many samples, especially metals. Thus, the ablation process could change the sample morphological features rapidly, and result in poor reproducibility statistics. In the present work, three artificial reference sample sets have been fabricated. These samples represent three different calcium based matrices, CaCO3 matrix, bone ash matrix and Ca hydroxyapatite matrix. A comparative study of UV (266 nm) and IR (1064 nm) LIBS for these three sets of samples has been performed under similar experimental conditions for the two systems (laser energy, spot size, repetition rate, irradiance, etc.) to examine the wavelength effect. The analytical results demonstrated that UV-LIBS has improved reproducibility, precision, stable plasma conditions, better linear fitting, and the reduction of matrix effects. Bone ash could be used as a suitable standard reference material for calcified tissue calibration using LIBS with a 266 nm excitation wavelength. Copyright © 2013 Elsevier B.V. All rights reserved.

  20. Influence of inoculation with ascochyta lentis on mineral contents (Na, Ca, Mg, Cu, and Fe) of susceptible and resistant lines of lentil (Lens culinaris medik.)

    International Nuclear Information System (INIS)

    Sahi, S.T.; Ghazanfar, M.U.; Habib, A.; Wakil, W.

    2010-01-01

    An experiment was conducted to determine the mineral contents of the healthy and inoculated plant of lentil and their relationship toward the Ascochyta lentis disease. The results revealed that magnesium, copper and zinc contents of un-inoculated lentil lines, included in susceptible group were higher than those included in resistant group whereas, sodium, calcium and iron contents were more in the resistant as compared to the susceptible group. Upon inoculation with Ascochyta lentis, the cause of lentil blight disease, sodium, calcium, zinc, copper and iron contents increased invariably in both the susceptible and resistant groups of lentil lines. On the other hand, magnesium contents increased in susceptible group but decreased in resistant group. The over all results proved that considerable variation exists in micro mineral contents of resistant and susceptible lines of lentil. (author)

  1. Generation of pea mutants for resistance to Ascochyta blight and powdery mildew and their characterization using isozyme markers [Pisum sativum L.; India

    International Nuclear Information System (INIS)

    Sharma, R.; Kant, A.; Kaushal, R.P.

    2004-01-01

    To induce resistance in pea against Ascochyta blight and powdery mildew through mutagenesis, two locally grown cultivars Lincoln and Palam Priya were subjected to three doses each of gamma rays (10, 15 and 20 kR) and chemical mutagen ethylmethane sulfonate (0.1, 0.2 and 0.3%). Reduced germination was observed in response to mutagen treatment in both cultivars. Phenotypic changes were observed in M1 and M2 generations of both the cultivars. In M2 generation twenty-seven mutants of Lincoln and sixteen of Palam Priya were found resistant to Ascochyta blight under natural epiphytotic conditions. High level of resistance in M2 generation against powdery mildew could not be achieved. Plant progenies in the M3 generation were also evaluated for resistance to Ascochyta pinodes as well as Erysiphe pisi through detached leaf technique. Six mutants of Lincoln and only one of Palam Priya were found resistant to A. pinodes. One mutant of Palam Priya (P15-3) showed resistance to both the pathogens. Increased phenylalanine ammonia lyase activity was observed in all the resistant mutants. New isoforms of peroxidase could be detected in the mutant P15-3 (Palam Priya) and also in L0.2-1 (Lincoln). However, not much variation for esterase could be observed [it

  2. Redefining Ceratocystis and allied genera

    Science.gov (United States)

    de Beer, Z.W.; Duong, T.A.; Barnes, I.; Wingfield, B.D.; Wingfield, M.J.

    2014-01-01

    The genus Ceratocystis was established in 1890 and accommodates many important fungi. These include serious plant pathogens, significant insect symbionts and agents of timber degradation that result in substantial economic losses. Virtually since its type was described from sweet potatoes, the taxonomy of Ceratocystis has been confused and vigorously debated. In recent years, particulary during the last two decades, it has become very obvious that this genus includes a wide diversity of very different fungi. These have been roughly lumped together due to their similar morphological structures that have clearly evolved through convergent evolution linked to an insect-associated ecology. As has been true for many other groups of fungi, the emergence of DNA-based sequence data and associated phylogenetic inferences, have made it possible to robustly support very distinct boundaries defined by morphological characters and ecological differences. In this study, DNA-sequence data for three carefully selected gene regions (60S, LSU, MCM7) were generated for 79 species residing in the aggregate genus Ceratocystis sensu lato and these data were subjected to rigorous phylogenetic analyses. The results made it possible to distinguish seven major groups for which generic names have been chosen and descriptions either provided or emended. The emended genera included Ceratocystis sensu stricto, Chalaropsis, Endoconidiophora, Thielaviopsis, and Ambrosiella, while two new genera, Davidsoniella and Huntiella, were described. In total, 30 new combinations have been made. This major revision of the generic boundaries in the Ceratocystidaceae will simplify future treatments and work with an important group of fungi including distantly related species illogically aggregated under a single name. PMID:25492989

  3. Characterization of organic materials by LIBS for exploration of correlation between molecular and elemental LIBS signals

    Directory of Open Access Journals (Sweden)

    Shikha Rai

    2011-12-01

    Full Text Available The present study is performed for the preparation of a database by accumulating LIBS spectra of 4-nitroaniline and 4-nitrotoluene in air and argon. Changes in the behavior of the molecular bands of the C2 Swan system and CN violet system as well as of atomic lines of C, H and N in the LIBS signal are appreciable in argon. In order to explore the correlation between observed LIBS signal and molecular composition of these materials, normalized intensities of the emission lines have been estimated for each compound. It has been found that the relative rates of increase/decrease in the normalized intensities for all sets are higher for 4-nitrotoluene in argon. The cause of the higher rate for 4-nitrotoluene might be due to the possession of a distinctive functional group. The ultimate goal behind the whole study is to use this data-base as input for the discrimination of energetic materials.

  4. On mod 2 and higher elliptic genera

    International Nuclear Information System (INIS)

    Liu Kefeng

    1992-01-01

    In the first part of this paper, we construct mod 2 elliptic genera on manifolds of dimensions 8k+1, 8k+2 by mod 2 index formulas of Dirac operators. They are given by mod 2 modular forms or mod 2 automorphic functions. We also obtain an integral formula for the mod 2 index of the Dirac operator. As a by-product we find topological obstructions to group actions. In the second part, we construct higher elliptic genera and prove some of their rigidity properties under group actions. In the third part we write down characteristic series for all Witten genera by Jacobi theta-functions. The modular property and transformation formulas of elliptic genera then follow easily. We shall also prove that Krichever's genera, which come from integrable systems, can be written as indices of twisted Dirac operators for SU-manifolds. Some general discussions about elliptic genera are given. (orig.)

  5. Fast LIBS Identification of Aluminum Alloys

    Directory of Open Access Journals (Sweden)

    Tawfik W.

    2007-04-01

    Full Text Available Laser-induced breakdown spectroscopy (LIBS has been applied to analysis aluminum alloy targets. The plasma is generated by focusing a 300 mJ pulsed Nd: YAG laser on the target in air at atmospheric pressure. Such plasma emission spectrum was collected using a one-meter length wide band fused-silica optical fiber connected to a portable Echelle spectrometer with intensified CCD camera. Spectroscopic analysis of plasma evolution of laser produced plasmas has been characterized in terms of their spectra, electron density and electron temperature assuming the LTE and optically thin plasma conditions. The LIBS spectrum was optimized for high S/N ratio especially for trace elements. The electron temperature and density were determined using the emission intensity and stark broadening, respectively, of selected aluminum spectral lines. The values of these parameters were found to change with the aluminum alloy matrix, i.e. they could be used as a fingerprint character to distinguish between different aluminum alloy matrices using only one major element (aluminum without needing to analysis the rest of elements in the matrix. Moreover, It was found that the values of T e and N e decrease with increasing the trace elements concentrations in the aluminum alloy samples. The obtained results indicate that it is possible to improve the exploitation of LIBS in the remote on-line industrial monitoring application, by following up only the values of T e and N e for aluminum in aluminum alloys as a marker for the correct alloying using an optical fiber probe.

  6. Fast LIBS Identification of Aluminum Alloys

    Directory of Open Access Journals (Sweden)

    Tawfik W.

    2007-04-01

    Full Text Available Laser-induced breakdown spectroscopy (LIBS has been applied to analysis aluminum alloy targets. The plasma is generated by focusing a 300 mJ pulsed Nd: YAG laser on the target in air at atmospheric pressure. Such plasma emission spectrum was collected using a one-meter length wide band fused-silica optical fiber connected to a portable Echelle spectrometer with intensified CCD camera. Spectroscopic analysis of plasma evolution of laser produced plasmas has been characterized in terms of their spectra, electron density and electron temperature assuming the LTE and optically thin plasma conditions. The LIBS spectrum was optimized for high S/N ratio especially for trace elements. The electron temperature and density were determined using the emission intensity and stark broadening, respectively, of selected aluminum spectral lines. The values of these parameters were found to change with the aluminum alloy matrix, i.e. they could be used as a fingerprint character to distinguish between different aluminum alloy matrices using only one major element (aluminum without needing to analysis the rest of elements in the matrix. Moreover, It was found that the values of T(e and N(e decrease with increasing the trace elements concentrations in the aluminum alloy samples. The obtained results indicate that it is possible to improve the exploitation of LIBS in the remote on-line industrial monitoring application, by following up only the values of T(e and N(e for the aluminum in aluminum alloys using an optical fiber probe.

  7. Comparative Transcriptome Analysis of the Necrotrophic Fungus Ascochyta rabiei during Oxidative Stress: Insight for Fungal Survival in the Host Plant

    Science.gov (United States)

    Singh, Kunal; Nizam, Shadab; Sinha, Manisha; Verma, Praveen K.

    2012-01-01

    Localized cell death, known as the hypersensitive response (HR), is an important defense mechanism for neutralizing phytopathogens. The hallmark of the HR is an oxidative burst produced by the host plant. We aimed to identify genes of the necrotrophic chickpea blight fungus Ascochyta rabiei that are involved in counteracting oxidative stress. A subtractive cDNA library was constructed after menadione treatment, which resulted in the isolation of 128 unigenes. A reverse northern blot was used to compare transcript profiles after H2O2, menadione and sodium nitroprusside treatments. A total of 70 unigenes were found to be upregulated by more than two-fold following menadione treatment at different time intervals. A large number of genes not previously associated with oxidative stress were identified, along with many stress-responsive genes. Differential expression patterns of several genes were validated by quantitative real-time PCR (qRT-PCR) and northern blotting. In planta qRT-PCR of several selected genes also showed differential expression patterns during infection and disease progression. These data shed light on the molecular responses of the phytopathogen A. rabiei to overcome oxidative and nitrosative stresses and advance the understanding of necrotrophic fungal pathogen survival mechanisms. PMID:22427966

  8. Implementing LibGuides 2: An Academic Case Study

    Science.gov (United States)

    Duncan, Vicky; Lucky, Shannon; McLean, Jaclyn

    2015-01-01

    Since 1997, the University of Saskatchewan Library has used "subject pages" to highlight key library resources. When Springshare announced it was launching LibGuides v2, a project team was assembled to transition a mixture of locally produced guides and guides created with the original LibGuides v1 software. This article synthesizes best…

  9. Expanding Library Services and Instruction Through LibGuides.

    Science.gov (United States)

    Ream, Tim; Parker-Kelly, Darlene

    2016-01-01

    Beginning in 2012, the Charles R. Drew University (CDU) Health Sciences Library used LibGuides in a number of innovative ways. Librarians constructed e-book databases, in-depth tutorials on technology-related topics, and web pages highlighting special events. To assess similar LibGuides innovation, CDU librarians developed an eight-question survey distributed to health sciences and hospital libraries throughout Southern California and Arizona. Results showed that libraries used LibGuides primarily to deliver access to online resources and to provide supplementary materials supporting instruction. Responses also revealed that many libraries had not yet adopted LibGuides. These findings were analyzed and compared to past and current LibGuides design at CDU.

  10. FermiLib v0.1

    Energy Technology Data Exchange (ETDEWEB)

    2017-02-27

    FermiLib is an open source software package designed to facilitate the development and testing of algorithms for simulations of fermionic systems on quantum computers. Fermionic simulations represent an important application of early quantum devices with a lot of potential high value targets, such as quantum chemistry for the development of new catalysts. This software strives to provide a link between the required domain expertise in specific fermionic applications and quantum computing to enable more users to directly interface with, and develop for, these applications. It is an extensible Python library designed to interface with the high performance quantum simulator, ProjectQ, as well as application specific software such as PSI4 from the domain of quantum chemistry. Such software is key to enabling effective user facilities in quantum computation research.

  11. LibGuide som social platform

    DEFF Research Database (Denmark)

    Nielsen, Susanne; Volder Kjær, Berit; Andersen, Bente Thorup

    2011-01-01

    undervisningsforløb. Det er formålet herved at højne både kvaliteten af undervisningen og udviklingen af elevernes informationskompetence. LibGuide er planlagt til at skulle understøtte en kommunikativ forståelse og samarbejdet mellem eleverne og bibliotekar/lærer, dvs. der er fokus på det sociale aspekt. Artiklen...... viser at de nævnte mål indebærer et eksplorativt udviklingsforløb. Udviklingen af et værktøj, der skal indfri de nævnte samarbejdsmæssige aspekter, forudsætter en evalueringsproces, hvor der gives tid til erhvervelsen af mange erfaringer og refleksioner. Artiklen gør rede for de ideer, der ligger bag...

  12. The Detection and Characterization of QoI-Resistant Didymella rabiei Causing Ascochyta Blight of Chickpea in Montana

    Directory of Open Access Journals (Sweden)

    Ayodeji S. Owati

    2017-06-01

    Full Text Available Ascochyta blight (AB of pulse crops (chickpea, field pea, and lentils causes yield loss in Montana, where 1.2 million acres was planted to pulses in 2016. Pyraclostrobin and azoxystrobin, quinone outside inhibitor (QoI fungicides, have been the choice of farmers for the management of AB in pulses. However, a G143A mutation in the cytochrome b gene has been reported to confer resistance to QoI fungicides. A total of 990 isolates of AB-causing fungi were isolated and screened for QoI resistance. Out of these, 10% were isolated from chickpea, 81% were isolated from field peas, and 9% isolated from lentil. These were from a survey of grower’s fields and seed lots (chickpea = 17, field pea = 131, and lentil = 21 from 23 counties in Montana sent to the Regional Pulse Crop Diagnostic Laboratory, Bozeman, MT, United States for testing. Fungicide-resistant Didymella rabiei isolates were found in one chickpea seed lot each sent from Daniels, McCone and Valley Counties, MT, from seed produced in 2015 and 2016. Multiple alignment analysis of amino acid sequences showed a missense mutation that replaced the codon for amino acid 143 from GGT to GCT, introducing an amino acid change from glycine to alanine (G143A, which is reported to be associated with QoI resistance. Under greenhouse conditions, disease severity was significantly higher on pyraclostrobin-treated chickpea plants inoculated with QoI-resistant isolates of D. rabiei than sensitive isolates (p-value = 0.001. This indicates that where resistant isolates are located, fungicide failures may be observed in the field. D. rabiei-specific polymerase chain reaction primer sets and hydrolysis probes were developed to efficiently discriminate QoI- sensitive and - resistant isolates.

  13. Development and application of sequence-tagged microsatellite site (STMS) markers in chickpea (Cicer arietinum), banana (Musa spp.) and their major pathogens, Ascochyta rabiei and Mycosphaerella fijiensis

    International Nuclear Information System (INIS)

    Winter, P.; Kaemmer, D.; Paff, T.; Geistlinger, J.; Neu, C.; Kahl, G.

    2001-01-01

    DNA markers of various kinds have found widespread application in many facets of plant breeding and plant pathogen control. Yet another marker type, sequence-tagged microsatellite (STMS) markers, provides the markers of choice for nearly every crop because of their co-dominant nature, reliability, ease of application and high polymorphic information content. We report here on the development of a whole set of STMS markers and the respective, selected primer sequences for two important crops, chickpea (Cicer arietinum L.) and banana (Musa acuminata), and for their most devastating fungal pathogens, Ascochyta rabiei and Mycosphaerella fijiensis, respectively. These markers were generated either by direct screening of size-selected genomic libraries with microsatellite-complementary oligonucleotides, or by enrichment of DNA fragments containing microsatellite sequences. A total of 69 markers for chickpea, 15 markers for M. acuminata, 19 markers for A rabiei and 11 markers for M. fijiensis, selected on the basis of their high information content and ease of use are presented here. These can be applied for mapping of the respective genomes, for various population studies, and cultivar and isolate identification. We further demonstrate that several of these markers can potentially be applied across species boundaries and thus could increase the marker repertoire also for other species of the genus Cicer, Musa and for Ascochyta-type pathogens of bean, and potentially also of lentil and pea. (author)

  14. Genera of phytopathogenic fungi: GOPHY 1

    Directory of Open Access Journals (Sweden)

    Y. Marin-Felix

    2017-03-01

    Full Text Available Genera of Phytopathogenic Fungi (GOPHY is introduced as a new series of publications in order to provide a stable platform for the taxonomy of phytopathogenic fungi. This first paper focuses on 21 genera of phytopathogenic fungi: Bipolaris, Boeremia, Calonectria, Ceratocystis, Cladosporium, Colletotrichum, Coniella, Curvularia, Monilinia, Neofabraea, Neofusicoccum, Pilidium, Pleiochaeta, Plenodomus, Protostegia, Pseudopyricularia, Puccinia, Saccharata, Thyrostroma, Venturia and Wilsonomyces. For each genus, a morphological description and information about its pathology, distribution, hosts and disease symptoms are provided. In addition, this information is linked to primary and secondary DNA barcodes of the presently accepted species, and relevant literature. Moreover, several novelties are introduced, i.e. new genera, species and combinations, and neo-, lecto- and epitypes designated to provide a stable taxonomy. This first paper includes one new genus, 26 new species, ten new combinations, and four typifications of older names.

  15. Education et Libération

    CERN Multimedia

    Jean-Pierre Lagnaux

    2013-01-01

    Vente d’artisanat du Tiers Monde Jeudi 23 et vendredi 24 mai 2013 CERN, Bâtiment principal Togo, Ecole Arc en ciel, construction des salles de classe. Appel pour le financement de ce chantier afin de libérer l’école de la charge des loyers payés pendant des années. Après nos réalisations en Amérique latine et au Bénin, nous mobilisons nos efforts pour l’école Arc en ciel de Kpeme, au Togo, sur les bords de l’Océan, à mi-chemin entre Lome et la frontière entre le Bénin et le Togo. Il s’agit d’une école primaire privée, laïque qui a très bonne réputation en termes de résultats, notamment pour les écoliers  en fin de scolarité primaire. Cela fait plusieurs années déjà que no...

  16. Delimiting Cladosporium from morphologically similar genera

    NARCIS (Netherlands)

    Crous, P.W.; Braun, U.; Schubert, K.; Groenewald, J.Z.

    2007-01-01

    The genus Cladosporium is restricted to dematiaceous hyphomycetes with a coronate scar type, and Davidiella teleomorphs. In the present study numerous cladosporium-like taxa are treated, and allocated to different genera based on their morphology and DNA phylogeny derived from the LSU nrRNA gene.

  17. Elliptic genera from multi-centers

    Energy Technology Data Exchange (ETDEWEB)

    Gaddam, Nava [Institute for Theoretical Physics and Center for Extreme Matter and Emergent Phenomena,Utrecht University, 3508 TD Utrecht (Netherlands)

    2016-05-13

    I show how elliptic genera for various Calabi-Yau threefolds may be understood from supergravity localization using the quantization of the phase space of certain multi-center configurations. I present a simple procedure that allows for the enumeration of all multi-center configurations contributing to the polar sector of the elliptic genera — explicitly verifying this in the cases of the quintic in ℙ{sup 4}, the sextic in Wℙ{sub (2,1,1,1,1)}, the octic in Wℙ{sub (4,1,1,1,1)} and the dectic in Wℙ{sub (5,2,1,1,1)}. With an input of the corresponding ‘single-center’ indices (Donaldson-Thomas invariants), the polar terms have been known to determine the elliptic genera completely. I argue that this multi-center approach to the low-lying spectrum of the elliptic genera is a stepping stone towards an understanding of the exact microscopic states that contribute to supersymmetric single center black hole entropy in N=2 supergravity.

  18. Morphological characterization of fungi associated with the ascochyta blight complex and pathogenic variability of Mycosphaerella pinodes on field pea crops in central Alberta

    Directory of Open Access Journals (Sweden)

    Hafiz Ahmed

    2015-02-01

    Full Text Available Field pea crops in central Alberta were surveyed for ascochyta blight from 2011 to 2012 and fungal isolates were recovered from foliar lesions on selected plants. Cultural and microscopic characterization of the 275 isolates obtained revealed that 272 were of Mycosphaerella pinodes and three were of Phoma medicaginis var. pinodella. Ascochyta pisi or Phoma koolunga were not identified. Isolates of M. pinodes were divided into two groups, GI and GII, based on visual assessment of culture characteristics. GI isolates (light to dark, mostly gray colony color; pycnidial distribution radial and concentric; conidia 10.5–14.5 × 4.2–6.2 μm most with one septum, occasionally two, constricted at the septum; spore mass light buff to flesh color were predominant (83%, while GII isolates (dark to gray colony color; pycnidia abundant; conidia 8–16 × 3.5–6.2 μm most with 1 septum, constricted at the septum; spore mass light buff to flesh color were less common (17%. The cultures of GII isolates were similar to recent descriptions of A. pisi, but they differed in spore color. In a host differential study, 13 pathotypes of M. pinodes were identified from 110 single-spore isolates. Pathotype I was predominant (88 isolates and virulent on all nine differential genotypes. The other pathotypes (pathotypes II–XIII were rare (1–6 isolates of each. Comparison of the present results with earlier studies suggests that pathotype I has been prevalent for many years, and that its aggressiveness on the host differentials has increased over time. Emphasis should be placed on breeding for resistance to M. pinodes in field pea cultivars intended for deployment in central Alberta.

  19. Study of different concentric rings inside gallstones with LIBS.

    Science.gov (United States)

    Pathak, Ashok Kumar; Singh, Vivek Kumar; Rai, Nilesh Kumar; Rai, Awadhesh Kumar; Rai, Pradeep Kumar; Rai, Pramod Kumar; Rai, Suman; Baruah, G D

    2011-07-01

    Gallstones obtained from patients from the north-east region of India (Assam) were studied using laser-induced breakdown spectroscopy (LIBS) technique. LIBS spectra of the different layers (in cross-section) of the gallstones were recorded in the spectral region 200-900 nm. Several elements, including calcium, magnesium, manganese, copper, silicon, phosphorus, iron, sodium and potassium, were detected in the gallstones. Lighter elements, including carbon, hydrogen, nitrogen and oxygen were also detected, which demonstrates the superiority of the LIBS technique over other existing analytical techniques. The LIBS technique was applied to investigate the evolution of C(2) swan bands and CN violet bands in the LIBS spectra of the gallstones in air and an argon atmosphere. The different layers (dark and light layers) of the gallstones were discriminated on the basis of the presence and intensities of the spectral lines for carbon, hydrogen, nitrogen, oxygen and copper. An attempt was also made to correlate the presence of major and minor elements in the gallstones with the common diet of the population of Assam.

  20. A cosmology forecast toolkit — CosmoLib

    Energy Technology Data Exchange (ETDEWEB)

    Huang, Zhiqi, E-mail: zqhuang@cita.utoronto.ca [CEA, Institut de Physique Théorique, Orme des Merisiers, Saint-Aubin, 91191 Gif-sur-Yvette Cédex (France)

    2012-06-01

    The package CosmoLib is a combination of a cosmological Boltzmann code and a simulation toolkit to forecast the constraints on cosmological parameters from future observations. In this paper we describe the released linear-order part of the package. We discuss the stability and performance of the Boltzmann code. This is written in Newtonian gauge and including dark energy perturbations. In CosmoLib the integrator that computes the CMB angular power spectrum is optimized for a l-by-l brute-force integration, which is useful for studying inflationary models predicting sharp features in the primordial power spectrum of metric fluctuations. As an application, CosmoLib is used to study the axion monodromy inflation model that predicts cosine oscillations in the primordial power spectrum. In contrast to the previous studies by Aich et al. and Meerburg et al., we found no detection or hint of the osicllations. We pointed out that the CAMB code modified by Aich et al. does not have sufficient numerical accuracy. CosmoLib and its documentation are available at http://www.cita.utoronto.ca/∼zqhuang/CosmoLib.

  1. Minimal genera of open 4-manifolds

    OpenAIRE

    Gompf, Robert E.

    2013-01-01

    We study exotic smoothings of open 4-manifolds using the minimal genus function and its analog for end homology. While traditional techniques in open 4-manifold smoothing theory give no control of minimal genera, we make progress by using the adjunction inequality for Stein surfaces. Smoothings can be constructed with much more control of these genus functions than the compact setting seems to allow. As an application, we expand the range of 4-manifolds known to have exotic smoothings (up to ...

  2. The genera of Nematinae (Hymenoptera, Tenthredinidae

    Directory of Open Access Journals (Sweden)

    Marko Prous

    2014-10-01

    Full Text Available Recent phylogenetic studies on Nematinae based on DNA sequences have shown extensive incongruencies with current nomenclature of genus-group taxa. Here, we expand previous DNA sequence datasets based on three genes (CoI, Cytb, and EF-1α, to include a fourth (NaK and more genera. The analyses largely confirm the previous findings, particularly the existence of two well-supported large clades, Euura and Pristiphora, together comprising more than 75% of the species of Nematinae. Basal relationships within these two clades remain poorly resolved, mirroring the difficulties in delimiting genera based on morphology. In addition, a moderately supported small clade, Nematus, is found. The relationships between the Euura, Pristiphora, and Nematus clades are uncertain. Therefore, to stabilize the nomenclature we treat these clades as genera. This taxonomic treatment results in numerous new combinations of species names. The following synonymies are proposed for the available genus-group names. Synonyms of Euura Newman, 1837: Cryptocampus Hartig, 1837, Euura Agassiz, 1848, Pontania Costa, 1852, syn. n., Epitactus Förster, 1854, syn. n., Amauronematus Konow, 1890, syn. n., Holcocneme Konow, 1890, syn. n., Pachynematus Konow, 1890, syn. n., Holcocnema Schulz, 1906, syn. n., Holcocnemis Konow, 1907, syn. n., Pteronidea Rohwer, 1911, syn. n., Pontopristia Malaise, 1921, syn. n., Brachycoluma Strand, 1929, syn. n., Decanematus Malaise, 1931, syn. n., Pikonema Ross, 1937, syn. n., Phyllocolpa Benson, 1960, syn. n., Eitelius Kontuniemi, 1966, syn. n., Gemmura E.L. Smith, 1968, Eupontania Zinovjev, 1985, syn. n., Larinematus Zhelochovtsev, 1988, syn. n., Polynematus Zhelochovtsev, 1988, syn. n., Bacconematus Zhelochovtsev, 1988, syn. n., Alpinematus Lacourt, 1996, syn. n., Epicenematus Lacourt, 1998, syn. n., Kontuniemiana Lacourt, 1998, syn. n., Lindqvistia Lacourt, 1998, syn. n., Luea Wei and Nie, 1998, syn. n., and Tubpontania Vikberg, 2010, syn. n. Synonyms

  3. Identification and sorting of materials with portable LIBS before decommissioning

    International Nuclear Information System (INIS)

    Vors, Evelyne; Sirven, Jean-Baptiste; Dehayem-Massop, Alix; Gallou, Guillaume

    2016-01-01

    Laser Induced Breakdown Spectroscopy (LIBS) is a technique of elemental analysis. A laser beam is focused on the surface of the sample to be analyzed. A small quantity of matter is ablated and a plasma formed by the atomized compounds is created. The spectral lines of the light emitted by the plasma are detected by an optical spectrometer. LIBS is a fully optical, multi-elementary and fast analytical technique, requiring no or little sample preparation. These features make the LIBS technique particularly suited for in situ measurements, and portable instruments are currently developed. LIBS analysis can be applied to the identification of materials using chemometric statistical methods (multivariate analysis) connecting the spectrum to the nature of the sample. Such methods have been successfully applied in our laboratory to the determination of the geographical origin of yellow cakes and to the identification of alloys. We present here the work performed with a portable LIBS instrument to meet the needs of waste sorting in industrial domain and in nuclear domain (inventory before decommissioning). A data base of LIBS spectra was built with a commercial instrument (IVEA SAS Easylibs) with samples of four categories of interest for industrial waste sorting: alloys, plastics, concrete and glasses. Different correct identification rates are requested by categories. The alloy spectra contain characteristic spectral lines and sub-categories can be easily discriminated (for example, different steel classes can be identified). The components of the plastics (mainly C, H, O and N) give rise to less characteristic lines and the plastics identification requires a separate study. Supervised statistical models are built with the data base spectra and predictions are instantly calculated for the spectra of unknown materials to identify in order to direct them to the correct waste stream. (authors)

  4. A Combined Remote LIBS and Raman Spectroscopic Study of Minerals

    Science.gov (United States)

    Hubble, H. W.; Ghosh, M.; Sharma, S. K.; Horton, K. A.; Lucey, P. G.; Angel, S. M.; Wiens, R. C.

    2002-01-01

    In this paper, we explore the use of remote LIBS combined with pulsed-laser Raman spectroscopy for mineral analysis at a distance of 10 meters. Samples analyzed include: carbonates (both biogenic and abiogenic), silicates, and sulfates. Additional information is contained in the original extended abstract.

  5. Occurrence of cyanobacteria genera in the Vaal Dam: implications ...

    African Journals Online (AJOL)

    The occurrence of cyanobacteria genera in the Vaal Dam was analysed and the factors that influence its dominance in the particular reservoir were also investigated. The study was motivated by the effects of the secondary metabolites of cyanobacteria genera on potable water production. Cyanobacteria genera have been ...

  6. Elemental misinterpretation in automated analysis of LIBS spectra.

    Science.gov (United States)

    Hübert, Waldemar; Ankerhold, Georg

    2011-07-01

    In this work, the Stark effect is shown to be mainly responsible for wrong elemental allocation by automated laser-induced breakdown spectroscopy (LIBS) software solutions. Due to broadening and shift of an elemental emission line affected by the Stark effect, its measured spectral position might interfere with the line position of several other elements. The micro-plasma is generated by focusing a frequency-doubled 200 mJ pulsed Nd/YAG laser on an aluminum target and furthermore on a brass sample in air at atmospheric pressure. After laser pulse excitation, we have measured the temporal evolution of the Al(II) ion line at 281.6 nm (4s(1)S-3p(1)P) during the decay of the laser-induced plasma. Depending on laser pulse power, the center of the measured line is red-shifted by 130 pm (490 GHz) with respect to the exact line position. In this case, the well-known spectral line positions of two moderate and strong lines of other elements coincide with the actual shifted position of the Al(II) line. Consequently, a time-resolving software analysis can lead to an elemental misinterpretation. To avoid a wrong interpretation of LIBS spectra in automated analysis software for a given LIBS system, we recommend using larger gate delays incorporating Stark broadening parameters and using a range of tolerance, which is non-symmetric around the measured line center. These suggestions may help to improve time-resolving LIBS software promising a smaller probability of wrong elemental identification and making LIBS more attractive for industrial applications.

  7. Recent advances in the use of laser-induced breakdown spectroscopy (LIBS) as a rapid point-of-care pathogen diagnostic

    Science.gov (United States)

    Rehse, Steven J.; Miziolek, Andrzej W.

    2012-06-01

    Laser-induced breakdown spectroscopy (LIBS) has made tremendous progress in becoming a viable technology for rapid bacterial pathogen detection and identification. The significant advantages of LIBS include speed (present the latest advances achieved in LIBS-based bacterial sensing including the ability to uniquely identify species from more than five bacterial genera with high-sensitivity and specificity. Bacterial identifications are completely unaffected by environment, nutrition media, or state of growth and accurate diagnoses can be made on autoclaved or UV-irradiated specimens. Efficient discrimination of bacteria at the strain level has been demonstrated. A rapid urinary tract infection diagnosis has been simulated with no sample preparation and a one second diagnosis of a pathogen surrogate has been demonstrated using advanced chemometric analysis with a simple "stop-light" user interface. Stand-off bacterial identification at a 20-m distance has been demonstrated on a field-portable instrument. This technology could be implemented in doctors' offices, clinics, or hospital laboratories for point-of-care medical specimen analysis; mounted on military medical robotic platforms for in-the- field diagnostics; or used in stand-off configuration for remote sensing and detection.

  8. Laser-induced breakdown spectroscopy (LIBS): a new spectrochemical technique

    International Nuclear Information System (INIS)

    Radziemski, L.J.; Loree, T.R.; Cremers, D.A.

    1982-01-01

    We have used the breakdown spark from a focused laser beam to generate analytically useful emission spectra of minor constituents in air and other carrier gases. The medium was sampled directly. It was not necessary to reduce the sample to solution nor to introduce electrodes. The apparatus is particularly simple; a pulsed laser, spectrometer, and some method for time resolution. The latter is essential in laser-induced-breakdown spectroscopy (LIBS) because of the strong early continuum. High temperatures in the spark result in vaporization of small particles, dissociation of molecules, and excitation of atomic and ionic spectra, including species which are normally difficult to detect. In one application, we have monitored beryllium in air at conventrations below 1 μg/m 3 , which is below 1 ppB (w/w). In another we have monitored chlorine and fluorine atoms in real time. LIBS has the potential for real-time direct sampling of contaminants in situ

  9. ANALISIS KUALITATIF PADA BATU KECUBUNG KOPI MENGGUNAKAN LIBS

    Directory of Open Access Journals (Sweden)

    Ida Ayu Gede Kusuma Dewi

    2016-08-01

    Full Text Available It has been conducted research on the qualitative analysis on amethyst coffee using LIBS.This study aims to determine the content of the element in amethyst coffee that can later be used as a comparison or reference further research in the elemental analysis amethyst coffee. With treatment, the laser irradiated amethyst coffee at 100 mJ, and the data retrieved by the accumulation of 3, delay time 1 µs and repetition as much as 3 points in different areas of each region analysis of depth function (Depth Profile with 60 times the laser irradiation. The main element as a constituent amethyst Coffee is silicon (Si, Sodium (Na, calcium (Ca, potassium (K and oxygen (O2, while the element on its outer surface is iron (Fe and phosphorus (P were analyzed using LIBS.

  10. Dry Heat Treatment Reduces the Occurrence of Cladosporium cucumerinum, Ascochyta citrullina, and Colletotrichum orbiculare on the Surface and Interior of Cucumber Seeds

    Directory of Open Access Journals (Sweden)

    Yanxia Shi

    2016-01-01

    Full Text Available Dry heat treatment has been identified as a method for disinfecting seed-borne pathogens in vegetable seeds. This study demonstrated that three seed-borne pathogens of cucumber (Cladosporium cucumerinum that causes scabs, Ascochyta citrullina that results in gummy stem blight, and Colletotrichum orbiculare that induces anthracnose could be effectively eradicated from cucumber seeds by dry heat treatment. In vitro growth of these three pathogens was inhibited by dry heat treatment at 70 °C for 40 min. These pathogens were inactivated after exposing infected seeds to 70 °C dry heat for at least 90 min. Seed infection was significantly reduced by exposing the seeds to 70 °C dry heat for at least 40 min. Seed moisture content and germination were slightly reduced after 70 °C heat treatment for 40–120 min. Seed vigor remained at a high level after dry heat treatment at 70 °C for 90 min. In conclusion, 70 °C dry heat treatment for 90 min was determined to be the optimal method for eradication of C. cucumerinum, Didymella bryoniae, and C. orbiculare from cucumber seeds.

  11. Development of LIBS for online analysis of solid nuclear materials

    International Nuclear Information System (INIS)

    Picard, Jessica

    2015-01-01

    With the objective to implement a fast, online analysis technique for control of solid metal nuclear materials, laser-induced breakdown spectroscopy (LIBS) technique is developed for quantitative analysis in uranium and plutonium. Since these matrices have a very dense emission spectrum in the UV-Visible range, the Vacuum Ultra-Violet (VUV) spectral range, less rich in lines, is explored. The aim of this thesis is to perform the analytical development of VUV-LIBS for quantitative analysis between 500 and 5000 ppm with an uncertainty of 3%. For that purpose, four steps were defined. First, for practical and safety reasons, it is generally better to perform experiments on surrogate materials. LIBS based on laser-material interaction, it is relevant to seek a surrogate of material of interest from the viewpoint of the ablated mass. Thus, a complete study of laser ablation of several metals was enabled to build a predictive model of the ablation efficiency. Titanium and stainless steel were defined as surrogate materials of plutonium and uranium for laser ablation. Secondly, the VUV-LIBS setup analytical performances were optimized for several elements of interest in four metals. Then, two calibration methods are used to determine the analytical performances. The limits of quantification are of the order of a few hundreds of ppm for all studied matrices, which validates the objective of impurities quantitation in the 500-5000 ppm range. Uncertainty is lower than 3% in the best cases. Finally, the calibration transfer between the four matrices was studied. A normalization of the nickel net signal measured in three matrices was presented. (author) [fr

  12. ImgLib2--generic image processing in Java.

    Science.gov (United States)

    Pietzsch, Tobias; Preibisch, Stephan; Tomancák, Pavel; Saalfeld, Stephan

    2012-11-15

    ImgLib2 is an open-source Java library for n-dimensional data representation and manipulation with focus on image processing. It aims at minimizing code duplication by cleanly separating pixel-algebra, data access and data representation in memory. Algorithms can be implemented for classes of pixel types and generic access patterns by which they become independent of the specific dimensionality, pixel type and data representation. ImgLib2 illustrates that an elegant high-level programming interface can be achieved without sacrificing performance. It provides efficient implementations of common data types, storage layouts and algorithms. It is the data model underlying ImageJ2, the KNIME Image Processing toolbox and an increasing number of Fiji-Plugins. ImgLib2 is licensed under BSD. Documentation and source code are available at http://imglib2.net and in a public repository at https://github.com/imagej/imglib. Supplementary data are available at Bioinformatics Online. saalfeld@mpi-cbg.de

  13. LEAF SURFACE COMPARISON OF THREE GENERA OF ARACEAE IN INDONESIA

    Directory of Open Access Journals (Sweden)

    Ina Erlinawati

    2013-07-01

    Full Text Available Alocasia, Colocasia and Remusatia are the genera of Araceae family which have high economic value, such as for food and ornamental plants. Those three genera, previously treated as Colocasieae tribe. Later, based on Nauheimer, L. et al. study in 2012, using plastid and nuclear DNA, Alocasia is placed in different tribe. Study on leaf anatomy of Araceae is still poor known. Comparison of three genera of Araceae, indicates a difference in the epidermis. Alocasia and Colocasia have stomata on both leaf surfaces (amphistomatic but Remusatia has stomata only limited on the lower surface. The three genera can be distinguished from epidermal cell shape, stomata complex and the presence of stomata.

  14. The use and effectiveness of the eLib subject gateways: a preliminary investigation

    OpenAIRE

    Mackie, M.; Burton, P.F.

    1999-01-01

    Internet subject gateways were set up under the Electronic Libraries Programme (eLib) in order to address some of the problems of searching the Internet which have been identified by information professionals, i.e. locating relevant, good quality information. This preliminary study examines the extent to which academics in two universities use three eLib subject gateways (EEVL, OMNI and SOSIG). The results are generally encouraging for the eLib programme, but it is necessary for the gateways ...

  15. Annotations on the genera Triscolia, Megascolia and Scolia (Hymenoptera, Scoliidae)

    NARCIS (Netherlands)

    Betrem, J.G.; Chester Bradley, J.

    1964-01-01

    This communication has been divided in three sections. Section A deals with the types of some taxa belonging to the genera Triscolia, Megascolia and Scolia; section B deals with the species of the genera Triscolia and Megascolia; a third section dealing with the species of the genus Scolia will be

  16. Six new genera of Braconidae (Hymenoptera) from China

    NARCIS (Netherlands)

    Achterberg, van C.; Chen, X.

    2004-01-01

    Six new genera of the family Braconidae (Hymenoptera) from China are described and illustrated: two genera of the subfamily Agathidinae: Facilagathis gen. nov. (type species: F. spinulata spec. nov.) and Cremnoptoides gen. nov. (type species: Cremnops pappi Sharkey, 1994); one genus of the subfamily

  17. Flora of St Katherine Protectorate: key to families and genera ...

    African Journals Online (AJOL)

    An illustrated key to families and genera of the flora of the St Katherine Protectorate is provided to facilitate the identification of the unique flora of the area, based on five years of collecting mainly in the mountains and wadis surrounding the town of St Katherine. The key includes 43 families and 141 genera, the families ...

  18. Zygospore ornamentation in the genera Mucor and Zygorhynchus

    NARCIS (Netherlands)

    Schipper, Maria A.A.; Samson, R.A.; Stalpers, J.A.

    1975-01-01

    Zygospores of species of the genera Mucor and Zygorhynchus were studied by means of scanning electron microscopy. The types of ornamentation are described and compared with those of some species of other genera of the Mucorales. The possibility of grouping the species according to zygospore

  19. New Records of Bee Genera (Hymenoptera: Apoidea from Colombia

    Directory of Open Access Journals (Sweden)

    Víctor H. González

    2006-07-01

    Full Text Available The solitary bee genera Lophothygater Moure y Michener (Apidae, Eucerini and Tapinotaspoides Moure (Apidae, Tapinotaspidini are reported from northern Colombia for the first time. These genera were previously known from the central Brazilian Amazonian and Argentina and Paraguay, respectively.

  20. Good practices in LIBS analysis: Review and advices

    Energy Technology Data Exchange (ETDEWEB)

    El Haddad, J.; Canioni, L.; Bousquet, B., E-mail: bruno.bousquet@u-bordeaux.fr

    2014-11-01

    This paper presents a review on the analytical results obtained by laser-induced breakdown spectroscopy (LIBS). In the first part, results on identification and classification of samples are presented including the risk of misclassification, and in the second part, results on concentration measurement based on calibration are accompanied with significant figures of merit including the concept of accuracy. Both univariate and multivariate approaches are discussed with special emphasis on the methodology, the way of presenting the results and the assessment of the methods. Finally, good practices are proposed for both classification and concentration measurement.

  1. Good practices in LIBS analysis: Review and advices

    International Nuclear Information System (INIS)

    El Haddad, J.; Canioni, L.; Bousquet, B.

    2014-01-01

    This paper presents a review on the analytical results obtained by laser-induced breakdown spectroscopy (LIBS). In the first part, results on identification and classification of samples are presented including the risk of misclassification, and in the second part, results on concentration measurement based on calibration are accompanied with significant figures of merit including the concept of accuracy. Both univariate and multivariate approaches are discussed with special emphasis on the methodology, the way of presenting the results and the assessment of the methods. Finally, good practices are proposed for both classification and concentration measurement

  2. Mercury Amalgam Diffusion in Human Teeth Probed Using Femtosecond LIBS.

    Science.gov (United States)

    Bello, Liciane Toledo; da Ana, Patricia Aparecida; Santos, Dário; Krug, Francisco José; Zezell, Denise Maria; Vieira, Nilson Dias; Samad, Ricardo Elgul

    2017-04-01

    In this work the diffusion of mercury and other elements from amalgam tooth restorations through the surrounding dental tissue (dentin) was evaluated using femtosecond laser-induced breakdown spectroscopy (fs-LIBS). To achieve this, seven deciduous and eight permanent extracted human molar teeth with occlusal amalgam restorations were half-sectioned and analyzed using pulses from a femtosecond laser. The measurements were performed from the amalgam restoration along the amalgam/dentin interface to the apical direction. It was possible to observe the presence of metallic elements (silver, mercury, copper and tin) emission lines, as well as dental constituent ones, providing fingerprints of each material and comparable data for checking the consistence of the results. It was also shown that the elements penetration depth values in each tooth are usually similar and consistent, for both deciduous and permanent teeth, indicating that all the metals diffuse into the dentin by the same mechanism. We propose that this diffusion mechanism is mainly through liquid dragging inside the dentin tubules. The mercury diffused further in permanent teeth than in deciduous teeth, probably due to the longer diffusion times due to the age of the restorations. It was possible to conclude that the proposed femtosecond-LIBS system can detect the presence of metals in the dental tissue, among the tooth constituent elements, and map the distribution of endogenous and exogenous chemical elements, with a spatial resolution that can be brought under 100 µm.

  3. New Library, New Librarian, New Student: Using LibGuides to Reach the Virtual Student

    Science.gov (United States)

    Roberts, Sara; Hunter, Dwight

    2011-01-01

    This article examines the virtual pathfinder and its relationship with distance education students. Various topics are addressed in relation to virtual students, LibGuides and collaborative efforts between librarians and teaching faculty. A brief history of the subject guide is presented, advantages and disadvantages of LibGuides are discussed and…

  4. Does LibQUAL+[TM] Account for Student Loyalty to a University College Library?

    Science.gov (United States)

    Helgesen, Oyvind; Nesset, Erik

    2011-01-01

    Purpose: The purpose of this paper is to find out whether LibQUAL+[TM]can account for student loyalty to the library of an institution of higher education. LibQUAL+[TM] is a marketing tool that is used to measure perceived service quality of libraries, and the present analysis aims at validating this service quality instrument within a more…

  5. [Rapid measurement of trace mercury in aqueous solutions with optical-electrical dual pulse LIBS technique].

    Science.gov (United States)

    Zhang, Qian; Xiong, Wei; Chen, Yu-Qi; Li, Run-Hua

    2011-02-01

    A wood slice was used as absorber to transfer liquid sample to solid sample in order to solve the problems existing in directly analyzing aqueous solutions with laser-induced breakdown spectroscopy (LIBS). An optical-electrical dual pulse LIBS (OEDP-LIBS) technique was first used to enhance atomic emission of mercury in laser-induced plasma. The calibration curves of mercury were obtained by typical single pulse LIBS and OEDP-LIBS techniques. The limit of detection (LOD) of mercury in these two techniques reaches 2.4 and 0.3 mg x L(-1), respectively. Under current experimental conditions, the time-integrated a tomic emission of mercury at 253.65 nm was enhanced 50 times and the LOD of mercury was improved by one order, if comparing OEDP-LIBS to single pulse LIBS. The required time for a whole analysis process is less than 5 minutes. As the atomic emission of mercury decays slowly while increasing the delay time between electrical pulse and laser pulse, increasing the electrical pulse width can further enhance the time integrated intensity of mercury emission and improve the detection sensitivity of mercury by OEDP-LIBS technique.

  6. SeqLib: a C ++ API for rapid BAM manipulation, sequence alignment and sequence assembly.

    Science.gov (United States)

    Wala, Jeremiah; Beroukhim, Rameen

    2017-03-01

    We present SeqLib, a C ++ API and command line tool that provides a rapid and user-friendly interface to BAM/SAM/CRAM files, global sequence alignment operations and sequence assembly. Four C libraries perform core operations in SeqLib: HTSlib for BAM access, BWA-MEM and BLAT for sequence alignment and Fermi for error correction and sequence assembly. Benchmarking indicates that SeqLib has lower CPU and memory requirements than leading C ++ sequence analysis APIs. We demonstrate an example of how minimal SeqLib code can extract, error-correct and assemble reads from a CRAM file and then align with BWA-MEM. SeqLib also provides additional capabilities, including chromosome-aware interval queries and read plotting. Command line tools are available for performing integrated error correction, micro-assemblies and alignment. SeqLib is available on Linux and OSX for the C ++98 standard and later at github.com/walaj/SeqLib. SeqLib is released under the Apache2 license. Additional capabilities for BLAT alignment are available under the BLAT license. jwala@broadinstitue.org ; rameen@broadinstitute.org. © The Author 2016. Published by Oxford University Press. All rights reserved. For Permissions, please e-mail: journals.permissions@oup.com

  7. Induction of resistance in chickpea (Cicer arietinum L. against Ascochyta rabiei by applying chemicals and plant extracts Inducción de resistencia en garbanzo (Cicer arietinum L. contra Ascochyta rabiei por la aplicación de productos químicos y extractos vegetales

    Directory of Open Access Journals (Sweden)

    M Usman Ghazanfar

    2011-03-01

    Full Text Available Since new fungicides are scarce in the market and because of environmental problems, researchers are now emphasizing other alternatives, such as the genetic potential of plants, resistance against pathogens, and the use of biotic and abiotic agents to develop induced or acquired resistance. We investigated the role of resistance-inducing substances (chemicals and plant extracts in three chickpea cvs. C-44, Pb-91, and Bittle-98 in field experiments against Ascochyta blight disease. These cultivars were selected on the basis of better yield potential shown in previous experiments. Aqueous solution of salicylic acid (SA at 0.5, 1.0, and 1.5 mM; acibenzolar-S-methyl (Bion®, ASM at 0.4, 0.8, and 1.2 mM; and KOH at 25, 50, and 75 mM were applied, whereas Azadirachta indica A. Juss., Datura metel L., and Allium sativum L. plant extracts were applied at 5, 10, and 15%. Disease reduction data was recorded at different intervals from 4 to 14 d after being induced and inoculated with the pathogen. Overall results revealed that significant disease reduction (79.3% was provided by ASM in the cv. C-44 at 1.2 mM compared with SA, whereas the least significant was KOH. Maximum disease reduction (43.5% against disease in the plant extracts was observed by applying A. indica leaf extract, but D. metel and A. sativum extracts were not effective. Our findings suggest that enhancing resistance before infecting chickpea plants could be an innovative control method for Ascochyta blight of chickpea.Debido a la escasez de nuevos fungicidas en el mercado y problemas ambientales, los investigadores están ahora enfatizando otras alternativas, tales como potencial genético de las plantas, resistencia contra patógenos y uso de agentes bióticos y abióticos para el desarrollo de resistencia inducida y adquirida. Investigamos el rol de sustancias inductoras de resistencia (químicos y extractos vegetales en tres cultivares de garbanzo ‘C-44’, ‘Pb-91’,

  8. LIBS Sensor for Sub-surface CO2 Leak Detection in Carbon Sequestration

    Directory of Open Access Journals (Sweden)

    Jinesh JAIN

    2017-07-01

    Full Text Available Monitoring carbon sequestration poses numerous challenges to the sensor community. For example, the subsurface environment is notoriously harsh, with large potential mechanical, thermal, and chemical stresses, making long-term stability and survival a challenge to any potential in situ monitoring method. Laser induced breakdown spectroscopy (LIBS has been demonstrated as a promising technology for chemical monitoring of harsh environments and hard to reach places. LIBS has a real- time monitoring capability and can be used for the elemental and isotopic analysis of solid, liquid, and gas samples. The flexibility of the probe design and the use of fiber- optics has made LIBS particularly suited for remote measurements. The paper focuses on developing a LIBS instrument for downhole high-pressure, high-temperature brine experiments, where CO2 leakage could result in changes in the trace mineral composition of an aquifer. The progress in fabricating a compact, robust, and simple LIBS sensor for widespread subsurface leak detection is presented.

  9. Molecular phylogeny of Trametes and related genera based on ...

    African Journals Online (AJOL)

    use

    2011-12-12

    Dec 12, 2011 ... Some species of Trametes and their related genera are so similar in microstructure characteristics that it is ... We found that both the conserved domains and the variable domains all ..... closely-related species was similar.

  10. Bathymetric preference of four major genera of rectilinear benthic ...

    Indian Academy of Sciences (India)

    (OMZ), both shallow marine (50–60 m water depth) and intermediate to deep water (150–1500 m water depth) ... depth differentiation among four rectilinear benthic foraminiferal genera presents the basic data for ..... in processing the samples.

  11. On The Etymology of Some Lichen Genera Names

    OpenAIRE

    Yavuz, Mustafa

    2016-01-01

    This study aims to investigate the etymology of some lichens’ genera names used in modern taxonomical botany. Growing on rocks, trees and even on soil, lichens are the only terrestrial cryptogamic organisms containing a fungal and an algal partner. Within this study, it has been focused to diagnose and improve an understanding of the similarities and differences between the names of lichen genera by comparing them in several languages. The etymological data collected during the study belongs ...

  12. AD-LIBS: inferring ancestry across hybrid genomes using low-coverage sequence data.

    Science.gov (United States)

    Schaefer, Nathan K; Shapiro, Beth; Green, Richard E

    2017-04-04

    Inferring the ancestry of each region of admixed individuals' genomes is useful in studies ranging from disease gene mapping to speciation genetics. Current methods require high-coverage genotype data and phased reference panels, and are therefore inappropriate for many data sets. We present a software application, AD-LIBS, that uses a hidden Markov model to infer ancestry across hybrid genomes without requiring variant calling or phasing. This approach is useful for non-model organisms and in cases of low-coverage data, such as ancient DNA. We demonstrate the utility of AD-LIBS with synthetic data. We then use AD-LIBS to infer ancestry in two published data sets: European human genomes with Neanderthal ancestry and brown bear genomes with polar bear ancestry. AD-LIBS correctly infers 87-91% of ancestry in simulations and produces ancestry maps that agree with published results and global ancestry estimates in humans. In brown bears, we find more polar bear ancestry than has been published previously, using both AD-LIBS and an existing software application for local ancestry inference, HAPMIX. We validate AD-LIBS polar bear ancestry maps by recovering a geographic signal within bears that mirrors what is seen in SNP data. Finally, we demonstrate that AD-LIBS is more effective than HAPMIX at inferring ancestry when preexisting phased reference data are unavailable and genomes are sequenced to low coverage. AD-LIBS is an effective tool for ancestry inference that can be used even when few individuals are available for comparison or when genomes are sequenced to low coverage. AD-LIBS is therefore likely to be useful in studies of non-model or ancient organisms that lack large amounts of genomic DNA. AD-LIBS can therefore expand the range of studies in which admixture mapping is a viable tool.

  13. Calibration Transfer in LIBS and Raman Spectroscopy for Planetary Applications

    Science.gov (United States)

    Dyar, M. D.; Thomas, B. F.; Parente, M.; Gemp, I.; Mullen, T. H.

    2017-12-01

    Planetary scientists rely on spectral libraries and instrument reproducibility to interpret results from missions. Major investments have been made into assembling libraries, but they often naively assume that spectra of single crystals versus powders and from varying instruments will be the same. Calibration transfer (CT) seeks to algorithmically resolve discrepancies among datasets from different instruments or conditions. It offers the ability to align suites of spectra with a small number of common samples, allowing better models to be built with combined data sets. LIBS and Raman data present different challenges for CT. Quantitative geochemical analyses by LIBS spectroscopy are limited by lack of consistency among repeated laser shots and across instruments. Many different factors affect the presence/absence of emission lines and their intensities, such as laser power/plasma temperature, angle of incidence, detector sensitivity/resolution. To overcome these, models in which disparate datasets are projected into a joint low-dimensional subspace where all data can be aligned before quantitative analysis, such as Correlation Analysis for Domain Adaptation (CADA), have proven very effective. They require some overlap between the populations of spectra to be aligned. For example, prediction of SiO2 on 80 samples from two different LIBS labs show errors of ±16-29 wt.% when the training and test sets have no overlap, and ±4.94 wt% SiO2 when CADA is used. Uncorrected Earth-Mars spectral differences are likely to cause errors with the same order of magnitude. As with other types of reflectance spectroscopy, Raman data are plagued by differences among single crystal/powder samples and laser wavelength that affect peak intensities, and by spectral offsets from instruments with varying resolution and wavenumber alignment schemes. These problems persist even within the archetypal RRUFF database. Pre-processing transformation functions such as optimized baseline removal

  14. A Deep Learning Approach to LIBS Spectroscopy for Planetary Applications

    Science.gov (United States)

    Mullen, T. H.; Parente, M.; Gemp, I.; Dyar, M. D.

    2017-12-01

    The ChemCam instrument on the Curiousity rover has collected >440,000 laser-induced breakdown spectra (LIBS) from 1500 different geological targets since 2012. The team is using a pipeline of preprocessing and partial least squares techniques to predict compositions of surface materials [1]. Unfortunately, such multivariate techniques are plagued by hard-to-meet assumptions involving constant hyperparameter tuning to specific elements and the amount of training data available; if the whole distribution of data is not seen, the method will overfit to the training data and generalizability will suffer. The rover only has 10 calibration targets on-board that represent a small subset of the geochemical samples the rover is expected to investigate. Deep neural networks have been used to bypass these issues in other fields. Semi-supervised techniques allow researchers to utilized small labeled datasets and vast amounts of unlabeled data. One example is the variational autoencoder model, a semi-supervised generative model in the form of a deep neural network. The autoencoder assumes that LIBS spectra are generated from a distribution conditioned on the elemental compositions in the sample and some nuisance. The system is broken into two models: one that predicts elemental composition from the spectra and one that generates spectra from compositions that may or may not be seen in the training set. The synthesized spectra show strong agreement with geochemical conventions to express specific compositions. The predictions of composition show improved generalizability to PLS. Deep neural networks have also been used to transfer knowledge from one dataset to another to solve unlabeled data problems. Given that vast amounts of laboratry LIBS spectra have been obtained in the past few years, it is now feasible train a deep net to predict elemental composition from lab spectra. Transfer learning (manifold alignment or calibration transfer) [2] is then used to fine-tune the model

  15. A Simple LIBS (Laser-Induced Breakdown Spectroscopy) Laboratory Experiment to Introduce Undergraduates to Calibration Functions and Atomic Spectroscopy

    Science.gov (United States)

    Chinni, Rosemarie C.

    2012-01-01

    This laboratory experiment introduces students to a different type of atomic spectroscopy: laser-induced breakdown spectroscopy (LIBS). LIBS uses a laser-generated spark to excite the sample; once excited, the elemental emission is spectrally resolved and detected. The students use LIBS to analyze a series of standard synthetic silicate samples…

  16. First measurements of LIBS in the Zr-Nb system

    International Nuclear Information System (INIS)

    Previtali, E; Ararat, C; Corvalan, C; Iribarren, M

    2012-01-01

    The Zr-based alloys are used in the nuclear industry. Particularly these alloys are used for the nuclear fuel elements in PWR reactors and CANDU type reactors. For this last case, zirconium-niobium (Zr-Nb) alloys have a particular importance for its special features like: resistance to corrosion, appropriate mechanic features and a low capture effective cross section for thermal neutrons. In this work the first LIBS measurements on Zr-Nb samples are shown. The spectrums from the plasma emission for Zr-Nb alloys are studied and discussed. Particularly, the variation of intensities as a function of laser energy is presented. Finally, the ablation morphology and the depth of the crater ablation are studied

  17. Recovery Of Electrodic Powder From Spent Lithium Ion Batteries (LIBs

    Directory of Open Access Journals (Sweden)

    Shin S.M.

    2015-06-01

    Full Text Available This study was focused on recycling process newly proposed to recover electrodic powder enriched in cobalt (Co and lithium (Li from spent lithium ion battery. In addition, this new process was designed to prevent explosion of batteries during thermal treatment under inert atmosphere. Spent lithium ion batteries (LIBs were heated over the range of 300°C to 600°C for 2 hours and each component was completely separated inside reactor after experiment. Electrodic powder was successfully recovered from bulk components containing several pieces of metals through sieving operation. The electrodic powder obtained was examined by X-ray diffraction (XRD, energy dispersive X-ray spectroscopy (EDS, and atomic absorption spectroscopy (AA and furthermore image of the powder was taken by scanning electron microscopy (SEM. It was finally found that cobalt and lithium were mainly recovered to about 49 wt.% and 4 wt.% in electrodic powder, respectively.

  18. Laser induced breakdown spectroscopy (LIBS) as a rapid tool for material analysis

    International Nuclear Information System (INIS)

    Hussain, T; Gondal, M A

    2013-01-01

    Laser induced breakdown spectroscopy (LIBS) is a novel technique for elemental analysis based on laser-generated plasma. In this technique, laser pulses are applied for ablation of the sample, resulting in the vaporization and ionization of sample in hot plasma which is finally analyzed by the spectrometer. The elements are identified by their unique spectral signatures. LIBS system was developed for elemental analysis of solid and liquid samples. The developed system was applied for qualitative as well as quantitative measurement of elemental concentration present in iron slag and open pit ore samples. The plasma was generated by focusing a pulsed Nd:YAG laser at 1064 nm on test samples to study the capabilities of LIBS as a rapid tool for material analysis. The concentrations of various elements of environmental significance such as cadmium, calcium, magnesium, chromium, manganese, titanium, barium, phosphorus, copper, iron, zinc etc., in these samples were determined. Optimal experimental conditions were evaluated for improving the sensitivity of developed LIBS system through parametric dependence study. The laser-induced breakdown spectroscopy (LIBS) results were compared with the results obtained using standard analytical technique such as inductively couple plasma emission spectroscopy (ICP). Limit of detection (LOD) of our LIBS system were also estimated for the above mentioned elements. This study demonstrates that LIBS could be highly appropriate for rapid online analysis of iron slag and open pit waste.

  19. Laser induced breakdown spectroscopy (LIBS) as a rapid tool for material analysis

    Science.gov (United States)

    Hussain, T.; Gondal, M. A.

    2013-06-01

    Laser induced breakdown spectroscopy (LIBS) is a novel technique for elemental analysis based on laser-generated plasma. In this technique, laser pulses are applied for ablation of the sample, resulting in the vaporization and ionization of sample in hot plasma which is finally analyzed by the spectrometer. The elements are identified by their unique spectral signatures. LIBS system was developed for elemental analysis of solid and liquid samples. The developed system was applied for qualitative as well as quantitative measurement of elemental concentration present in iron slag and open pit ore samples. The plasma was generated by focusing a pulsed Nd:YAG laser at 1064 nm on test samples to study the capabilities of LIBS as a rapid tool for material analysis. The concentrations of various elements of environmental significance such as cadmium, calcium, magnesium, chromium, manganese, titanium, barium, phosphorus, copper, iron, zinc etc., in these samples were determined. Optimal experimental conditions were evaluated for improving the sensitivity of developed LIBS system through parametric dependence study. The laser-induced breakdown spectroscopy (LIBS) results were compared with the results obtained using standard analytical technique such as inductively couple plasma emission spectroscopy (ICP). Limit of detection (LOD) of our LIBS system were also estimated for the above mentioned elements. This study demonstrates that LIBS could be highly appropriate for rapid online analysis of iron slag and open pit waste.

  20. A combined remote Raman and LIBS instrument for characterizing minerals with 532 nm laser excitation.

    Science.gov (United States)

    Sharma, Shiv K; Misra, Anupam K; Lucey, Paul G; Lentz, Rachel C F

    2009-08-01

    The authors have developed an integrated remote Raman and laser-induced breakdown spectroscopy (LIBS) system for measuring both the Raman and LIBS spectra of minerals with a single 532 nm laser line of 35 mJ/pulse and 20 Hz. The instrument has been used for analyzing both Raman and LIBS spectra of carbonates, sulfates, hydrous and anhydrous silicates, and iron oxide minerals in air. These experiments demonstrate that by focusing a frequency-doubled 532 nm Nd:YAG pulsed laser beam with a 10x beam expander to a 529-microm diameter spot on a mineral surface located at 9 m, it is possible to measure simultaneously both the remote Raman and LIBS spectra of calcite, gypsum and olivine by adjusting the laser power electronically. The spectra of calcite, gypsum, and olivine contain fingerprint Raman lines; however, it was not possible to measure the remote Raman spectra of magnetite and hematite at 9 m because of strong absorption of 532 nm laser radiation and low intensities of Raman lines from these minerals. The remote LIBS spectra of both magnetite and hematite contain common iron emission lines but show difference in the minor amount of Li present in these two minerals. Remote Raman and LIBS spectra of a number of carbonates, sulfates, feldspars and phyllosilicates at a distance of 9 m were measured with a 532-nm laser operating at 35 mJ/pulse and by changing photon flux density at the sample by varying the spot diameter from 10 mm for Raman to 530 microm for LIBS measurements. The complementary nature of these spectra is highlighted and discussed. The combined Raman and LIBS system can also be re-configured to perform micro-Raman and micro-LIBS analyses, which have applications in trace/residue analysis and analysis of very small samples in the nano-gram range.

  1. Comparison between two genera, species and cultivars in Lactuceae, (3)

    International Nuclear Information System (INIS)

    Haque, M.Z.; Godward, M.B.E.

    1986-01-01

    Estimation of DNA amounts (in arbitrary units) in two genera, two species, and three cultivars of one species, permits comparison between them and indicates that the biggest difference is between the two genera, Lactuca and Cichorium; but that the difference between the cultivars of Lactuca sativa is greater than the difference between Lactuca serriola and the mean for Lactuca sativa. Lactuca serriola is a presumed ancestor of Lactuca sativa. The most radiosensitive species, L. serriola, has slightly less DNA and smaller nuclear volume than the next most sensitive, L. sativa cult. Cos. This is discussed. (author)

  2. Effects of laser wavelengths and pulse energy ratio on the emission enhancement in dual pulse LIBS

    International Nuclear Information System (INIS)

    Ahmed, Rizwan; Iqbal, Javed; Baig, M Aslam

    2015-01-01

    We present new studies on the effects of laser wavelengths, pulse energy ratio and interpulse delay between two laser pulses in the collinear dual pulse configuration of laser-induced breakdown spectroscopy (LIBS) on an iron sample in air using the fundamental (1064 nm) and the second harmonics (532 nm) of Nd:YAG lasers. In the dual pulse LIBS, an optimum value of interpulse delay with an appropriate combination of laser wavelengths, and laser pulse energy ratio, yields a 30 times signal intensity enhancement in the neutral iron lines as compared with single pulse LIBS. A comparison in the spatial variations of electron temperature along the axis of the plume expansion in single and double pulse LIBS has also been studied. (letter)

  3. Novel high-density packaging of solid state diode pumped eye-safe laser for LIBS

    Science.gov (United States)

    Bares, Kim; Torgerson, Justin; McNeil, Laine; Maine, Patrick; Patterson, Steve

    2018-02-01

    Laser-Induced Breakdown Spectroscopy (LIBS) has proven to be a useful research tool for material analysis for decades. However, because of the amount of energy required in a few nanosecond pulse to generate a stable and reliable LIBS signal, the lasers are often large and inefficient, relegating their implementation to research facilities, factory floors, and assembly lines. Small portable LIBS systems are now possible without having to compromise on energy needs by leveraging off of advances in high-density packaging of electronics, opto-mechanics, and highly efficient laser resonator architecture. This paper explores the integration of these techniques to achieve a mJ class eye-safe LIBS laser source, while retaining a small, light-weight package suitable for handheld systems.

  4. Rotating and propagating LIB stabilized by self-induced magnetic field

    International Nuclear Information System (INIS)

    Murakami, H.; Aoki, T.; Kawata, S.; Niu, K.

    1984-01-01

    Rotating motion of a propagating LIB is analyzed in order to suppress the mixed mode of the Kelvin-Helmholtz instability, the tearing instability and the sausage instability by the action of a self-induced magnetic field in the axial direction. The beams are assumed to be charge-neutralized but not current-neutralized. The steady-state solutions of a propagating LIB with rotation are first obtained numerically. Through the dispersion relation with respect to the ikonal type of perturbations, which are added to the steady-state solutions, the growth rates of instabilities appearing in an LIB are obtained. It is concluded that if the mean rotating velocity of an LIB is comparable to the propagation velocity, the instability disappears in the propagating ion beam. (author)

  5. Raman/LIBS Data Fusion via Two-Way Variational Autoencoders

    Science.gov (United States)

    Parente, M.; Gemp, I.

    2018-04-01

    We propose an original solution to extracting mineral abundances from Raman spectra by combining Raman data with LIBS using a novel deep learning model based on variational autoencoders and data fusion, which outperforms the current state of the art.

  6. [An automatic peak detection method for LIBS spectrum based on continuous wavelet transform].

    Science.gov (United States)

    Chen, Peng-Fei; Tian, Di; Qiao, Shu-Jun; Yang, Guang

    2014-07-01

    Spectrum peak detection in the laser-induced breakdown spectroscopy (LIBS) is an essential step, but the presence of background and noise seriously disturb the accuracy of peak position. The present paper proposed a method applied to automatic peak detection for LIBS spectrum in order to enhance the ability of overlapping peaks searching and adaptivity. We introduced the ridge peak detection method based on continuous wavelet transform to LIBS, and discussed the choice of the mother wavelet and optimized the scale factor and the shift factor. This method also improved the ridge peak detection method with a correcting ridge method. The experimental results show that compared with other peak detection methods (the direct comparison method, derivative method and ridge peak search method), our method had a significant advantage on the ability to distinguish overlapping peaks and the precision of peak detection, and could be be applied to data processing in LIBS.

  7. Multivariate analysis of remote LIBS spectra using partial least squares, principal component analysis, and related techniques

    Energy Technology Data Exchange (ETDEWEB)

    Clegg, Samuel M [Los Alamos National Laboratory; Barefield, James E [Los Alamos National Laboratory; Wiens, Roger C [Los Alamos National Laboratory; Sklute, Elizabeth [MT HOLYOKE COLLEGE; Dyare, Melinda D [MT HOLYOKE COLLEGE

    2008-01-01

    Quantitative analysis with LIBS traditionally employs calibration curves that are complicated by the chemical matrix effects. These chemical matrix effects influence the LIBS plasma and the ratio of elemental composition to elemental emission line intensity. Consequently, LIBS calibration typically requires a priori knowledge of the unknown, in order for a series of calibration standards similar to the unknown to be employed. In this paper, three new Multivariate Analysis (MV A) techniques are employed to analyze the LIBS spectra of 18 disparate igneous and highly-metamorphosed rock samples. Partial Least Squares (PLS) analysis is used to generate a calibration model from which unknown samples can be analyzed. Principal Components Analysis (PCA) and Soft Independent Modeling of Class Analogy (SIMCA) are employed to generate a model and predict the rock type of the samples. These MV A techniques appear to exploit the matrix effects associated with the chemistries of these 18 samples.

  8. Applications of Laser-Induced Breakdown Spectroscopy (LIBS) in Molten Metal Processing

    Science.gov (United States)

    Hudson, Shaymus W.; Craparo, Joseph; De Saro, Robert; Apelian, Diran

    2017-10-01

    In order for metals to meet the demand for critical applications in the automotive, aerospace, and defense industries, tight control over the composition and cleanliness of the metal must be achieved. The use of laser-induced breakdown spectroscopy (LIBS) for applications in metal processing has generated significant interest for its ability to perform quick analyses in situ. The fundamentals of LIBS, current techniques for deployment on molten metal, demonstrated capabilities, and possible avenues for development are reviewed and discussed.

  9. Molecular phylogeny of Trametes and related genera based on ...

    African Journals Online (AJOL)

    Some species of Trametes and their related genera are so similar in microstructure characteristics that it is difficult to identify and separate them by traditional taxonomy. In this study, we elucidated relationships among Trametes through comparison of the nuclear internal transcribed spacer (ITS) and the nearly complete ...

  10. Flora of St Katherine Protectorate: key to families and genera ...

    African Journals Online (AJOL)

    Flora of St Katherine Protectorate: key to families and genera. Wafaa Kamel, Magda Gazar, Samy Zalat, Francis Gilbert. Abstract. Egyptian Journal of Natural History Vol.1 1999: 1-39. Full Text: EMAIL FREE FULL TEXT EMAIL FREE FULL TEXT · DOWNLOAD FULL TEXT DOWNLOAD FULL TEXT.

  11. Some notes on species of the genera Bachia and Scolecosaurus

    NARCIS (Netherlands)

    Brongersma, L.D.

    1946-01-01

    Our herpetological collections contain only five specimens referable to the genera Bachia and Scolecosaurus, while the genus Bachia is represented in the Amsterdam Zoological Museum by eight specimens. Scanty though this material may be, some of the specimens proved to be of sufficient interest to

  12. The genera Rhoptropus and Phelsuma (Reptilia: Gekkonidae) in ...

    African Journals Online (AJOL)

    The genus Rhoplropella Hewitt, 1937 is shown to be a junior synonym of Phelsuma Gray, 1825 and the genera Phelsumaand Rhoplropus Peters, 1869 are compared. It is pointed out that Phelsuma ocettata shows a great deal of convergence with Rhoplropus but that both of these forms exhibit their own distinctive derived ...

  13. Éducation et Libération

    CERN Multimedia

    Education et Libération

    2013-01-01

    Vente d’artisanat du Tiers Monde Mardi 29 et mercredi 30 octobre 2013 CERN, Bâtiment principal Togo, Ecole Arc en ciel, construction des salles de classe. Appel pour le financement de ce chantier afin de libérer l’école de la charge des loyers payés pendant des années. Après nos réalisations en Amérique latine et au Bénin, nous mobilisons nos efforts pour l’école Arc en ciel de Kpeme, au Togo, sur les bords de l’Océan, à mi-chemin entre Lome et la frontière entre le Bénin et le Togo. Il s’agit d’une école primaire privée, laïque qui a très bonne réputation en termes de résultats, notamment pour les écoliers  en fin de scolarité primaire. Cela fait plusieurs années déjà q...

  14. Quantitative LIBS analysis of vanadium in samples of hexagonal mesoporous silica catalysts.

    Science.gov (United States)

    Pouzar, Miloslav; Kratochvíl, Tomás; Capek, Libor; Smoláková, Lucie; Cernohorský, Tomás; Krejcová, Anna; Hromádko, Ludek

    2011-02-15

    The method for the analysis of vanadium in hexagonal mesoporous silica (V-HMS) catalysts using Laser Induced Breakdown Spectrometry (LIBS) was suggested. Commercially available LIBS spectrometer was calibrated with the aid of authentic V-HMS samples previously analyzed by ICP OES after microwave digestion. Deposition of the sample on the surface of adhesive tape was adopted as a sample preparation method. Strong matrix effect connected with the catalyst preparation technique (1st vanadium added in the process of HMS synthesis, 2nd already synthesised silica matrix was impregnated by vanadium) was observed. The concentration range of V in the set of nine calibration standards was 1.3-4.5% (w/w). Limit of detection was 0.13% (w/w) and it was calculated as a triple standard deviation from five replicated determinations of vanadium in the real sample with a very low vanadium concentration. Comparable results of LIBS and ED XRF were obtained if the same set of standards was used for calibration of both methods and vanadium was measured in the same type of real samples. LIBS calibration constructed using V-HMS-impregnated samples failed for measuring of V-HMS-synthesized samples. LIBS measurements seem to be strongly influenced with different chemical forms of vanadium in impregnated and synthesised samples. The combination of LIBS and ED XRF is able to provide new information about measured samples (in our case for example about procedure of catalyst preparation). Copyright © 2010 Elsevier B.V. All rights reserved.

  15. Characterization and forensic analysis of soil samples using laser-induced breakdown spectroscopy (LIBS).

    Science.gov (United States)

    Jantzi, Sarah C; Almirall, José R

    2011-07-01

    A method for the quantitative elemental analysis of surface soil samples using laser-induced breakdown spectroscopy (LIBS) was developed and applied to the analysis of bulk soil samples for discrimination between specimens. The use of a 266 nm laser for LIBS analysis is reported for the first time in forensic soil analysis. Optimization of the LIBS method is discussed, and the results compared favorably to a laser ablation inductively coupled plasma mass spectrometry (LA-ICP-MS) method previously developed. Precision for both methods was LIBS limits of detection were LIBS method successfully discriminated samples from two different sites in Dade County, FL. Analysis of variance, Tukey's post hoc test and Student's t test resulted in 100% discrimination with no type I or type II errors. Principal components analysis (PCA) resulted in clear groupings of the two sites. A correct classification rate of 99.4% was obtained with linear discriminant analysis using leave-one-out validation. Similar results were obtained when the same samples were analyzed by LA-ICP-MS, showing that LIBS can provide similar information to LA-ICP-MS. In a forensic sampling/spatial heterogeneity study, the variation between sites, between sub-plots, between samples and within samples was examined on three similar Dade sites. The closer the sampling locations, the closer the grouping on a PCA plot and the higher the misclassification rate. These results underscore the importance of careful sampling for geographic site characterization.

  16. [Comparative investigation of underwater-LIBS using 532 and 1 064 nm lasers].

    Science.gov (United States)

    Song, Jiao-Jian; Tian, Ye; Lu, Yuan; Li, Ying; Zheng, Rong-Er

    2014-11-01

    With the hope of applying laser induced breakdown spectroscopy (LIBS) to the ocean applications, the laser energy at 532 and 1 064 nm wavelength with 3 and 40 mj respectively was used, which was near their breakdown threshold. Extensive experimental investigations of LIBS from CaCl2 water solution were carried out in this paper using different laser wavelengths of 532 and 1 064 nm. The obtained results show that compared with the 532 nm laser, the 1 064 nm laser can induce the plasma in water with higher emission intensity and longer lifetime, while the reproducibility of LIBS signal under 1 064 nm laser is poorer. On the other hand, due to the different attenuation ratios of 532 and 1 064 nm laser energies in water, the LIBS signal of 1 064 nm laser decreases a lot within the transmission distance range 2-5 cm, while LIBS signal of 532 nm remains the same, because that the wavelength of 532 nm lies in the "transmission window" of the water solution. This study will provide valuable design considerations for the development of LIBS-sea system in near future.

  17. Rapid detection of soils contaminated with heavy metals and oils by laser induced breakdown spectroscopy (LIBS).

    Science.gov (United States)

    Kim, Gibaek; Kwak, Jihyun; Kim, Ki-Rak; Lee, Heesung; Kim, Kyoung-Woong; Yang, Hyeon; Park, Kihong

    2013-12-15

    A laser induced breakdown spectroscopy (LIBS) coupled with the chemometric method was applied to rapidly discriminate between soils contaminated with heavy metals or oils and clean soils. The effects of the water contents and grain sizes of soil samples on LIBS emissions were also investigated. The LIBS emission lines decreased by 59-75% when the water content increased from 1.2% to 7.8%, and soil samples with a grain size of 75 μm displayed higher LIBS emission lines with lower relative standard deviations than those with a 2mm grain size. The water content was found to have a more pronounced effect on the LIBS emission lines than the grain size. Pelletizing and sieving were conducted for all samples collected from abandoned mining areas and military camp to have similar water contents and grain sizes before being analyzed by the LIBS with the chemometric analysis. The data show that three types of soil samples were clearly discerned by using the first three principal components from the spectral data of soil samples. A blind test was conducted with a 100% correction rate for soil samples contaminated with heavy metals and oil residues. Copyright © 2013 Elsevier B.V. All rights reserved.

  18. Study of archaeological coins of different dynasties using libs coupled with multivariate analysis

    Science.gov (United States)

    Awasthi, Shikha; Kumar, Rohit; Rai, G. K.; Rai, A. K.

    2016-04-01

    Laser Induced Breakdown Spectroscopy (LIBS) is an atomic emission spectroscopic technique having unique capability of an in-situ monitoring tool for detection and quantification of elements present in different artifacts. Archaeological coins collected form G.R. Sharma Memorial Museum; University of Allahabad, India has been analyzed using LIBS technique. These coins were obtained from excavation of Kausambi, Uttar Pradesh, India. LIBS system assembled in the laboratory (laser Nd:YAG 532 nm, 4 ns pulse width FWHM with Ocean Optics LIBS 2000+ spectrometer) is employed for spectral acquisition. The spectral lines of Ag, Cu, Ca, Sn, Si, Fe and Mg are identified in the LIBS spectra of different coins. LIBS along with Multivariate Analysis play an effective role for classification and contribution of spectral lines in different coins. The discrimination between five coins with Archaeological interest has been carried out using Principal Component Analysis (PCA). The results show the potential relevancy of the methodology used in the elemental identification and classification of artifacts with high accuracy and robustness.

  19. Występowanie szarej pleśni tulipanow – Botrytis tulipae (Lib. Lind na plantacjach produkcyjnych [Botrytis tulipae (Lib. Lind in tulip plantations

    Directory of Open Access Journals (Sweden)

    Cz. Zamorski

    2015-06-01

    Full Text Available The incidence of disease caused by Botrytis tulipae (Lib. Lind was studied in selected tulip plantations. Primary and secondary infection, as well as infections of daughter bulbs were observed. The number of affected plants differed according (to the variety, season, and rainfall.

  20. Wavelength dependence of laser induced breakdown spectroscopy (LIBS) on questioned document investigation.

    Science.gov (United States)

    Elsherbiny, Nany; Aied Nassef, O

    2015-07-01

    The fast and nearly non-destructive criteria of laser induced breakdown spectroscopy (LIBS) technique has been exploited for forensic purposes, specifically, document investigation. The dependence of the optical emission spectra of different black gel ink samples on the excitation laser wavelength, namely the visible wavelength at λ=532 nm and the IR wavelength at λ=1064 nm, was studied. The inks of thirty black gel-ink pens comprising ten brands were analyzed to determine the variation of the chemical composition of ink and to discriminate among them with minimum mass removal and minimum damage to the document's paper. Under the adopted experimental conditions, the ability of the visible LIBS to differentiate among the different ink samples was successful compared to IR LIBS at the same laser pulse energy (~25 mJ/pulse, laser fluence is ~1400J·cm(-2) for visible laser and ~1100J·cm(-2) for IR laser) which could be attributed to the IR absorption effects by the black ink. However, the visible LIBS produces deeper crater with respect to that produced by IR LIBS. Applying IR LIBS with higher pulse energy of ~87mJ (laser fluence is ~4100J·cm(-2)), identification and differentiation of the adopted samples was performed with producing a larger-diameter but superficial crater. The plasma parameters are discussed at the adopted experimental conditions. The results support the potential of LIBS technique using both the visible and IR lasers to be commercially developed for forensic document examination. Copyright © 2015 Forensic Science Society. Published by Elsevier Ireland Ltd. All rights reserved.

  1. In situ semi-quantitative analysis of polluted soils by laser-induced breakdown spectroscopy (LIBS).

    Science.gov (United States)

    Ismaël, Amina; Bousquet, Bruno; Michel-Le Pierrès, Karine; Travaillé, Grégoire; Canioni, Lionel; Roy, Stéphane

    2011-05-01

    Time-saving, low-cost analyses of soil contamination are required to ensure fast and efficient pollution removal and remedial operations. In this work, laser-induced breakdown spectroscopy (LIBS) has been successfully applied to in situ analyses of polluted soils, providing direct semi-quantitative information about the extent of pollution. A field campaign has been carried out in Brittany (France) on a site presenting high levels of heavy metal concentrations. Results on iron as a major component as well as on lead and copper as minor components are reported. Soil samples were dried and prepared as pressed pellets to minimize the effects of moisture and density on the results. LIBS analyses were performed with a Nd:YAG laser operating at 1064 nm, 60 mJ per 10 ns pulse, at a repetition rate of 10 Hz with a diameter of 500 μm on the sample surface. Good correlations were obtained between the LIBS signals and the values of concentrations deduced from inductively coupled plasma atomic emission spectroscopy (ICP-AES). This result proves that LIBS is an efficient method for optimizing sampling operations. Indeed, "LIBS maps" were established directly on-site, providing valuable assistance in optimizing the selection of the most relevant samples for future expensive and time-consuming laboratory analysis and avoiding useless analyses of very similar samples. Finally, it is emphasized that in situ LIBS is not described here as an alternative quantitative analytical method to the usual laboratory measurements but simply as an efficient time-saving tool to optimize sampling operations and to drastically reduce the number of soil samples to be analyzed, thus reducing costs. The detection limits of 200 ppm for lead and 80 ppm for copper reported here are compatible with the thresholds of toxicity; thus, this in situ LIBS campaign was fully validated for these two elements. Consequently, further experiments are planned to extend this study to other chemical elements and other

  2. Combined Raman/LIBS spectrometer elegant breadboard: built and tested - and flight model spectrometer unit

    Science.gov (United States)

    Ahlers, B.; Hutchinson, I.; Ingley, R.

    2017-11-01

    A spectrometer for combined Raman and Laser Induced Breakdown Spectroscopy (LIBS) is amongst the different instruments that have been pre-selected for the Pasteur payload of the ExoMars rover. It is regarded as a fundamental, next-generation instrument for organic, mineralogical and elemental characterisation of Martian soil, rock samples and organic molecules. Raman spectroscopy and LIBS will be integrated into a single instrument sharing many hardware commonalities [1]. The combined Raman / LIBS instrument has been recommended as the highest priority mineralogy instrument to be included in the rover's analytical laboratory for the following tasks: Analyse surface and sub-surface soil and rocks on Mars, identify organics in the search for life and determine soil origin & toxicity. The synergy of the system is evident: the Raman spectrometer is dedicated to molecular analysis of organics and minerals; the LIBS provides information on the sample's elemental composition. An international team, under ESA contract and with the leadership of TNO Science and Industry, has built and tested an Elegant Bread Board (EBB) of the combined Raman / LIBS instrument. The EBB comprises a specifically designed, extremely compact, spectrometer with high resolution over a large wavelength range, suitable for both Raman spectroscopy and LIBS measurements. The EBB also includes lasers, illumination and imaging optics as well as fibre optics for light transfer. A summary of the functional and environmental requirements together with a description of the optical design and its expected performance are described in [2]. The EBB was developed and constructed to verify the instruments' end-to-end functional performance with natural samples. The combined Raman / LIBS EBB realisation and test results of natural samples will be presented. For the Flight Model (FM) instrument, currently in the design phase, the Netherlands will be responsible for the design, development and verification of the

  3. Cytological studies in Four Endemic Genera of Apiaceae from India

    Directory of Open Access Journals (Sweden)

    Kumar Vinod C. Gosavi

    2016-11-01

    Full Text Available The family Apiaceae comprises 428 genera worldwide, of which 68 are represented in India. Karnataka P.K. Mukh. & Constance, Pinda P.K. Mukh. & Constance, Polyzygus Dalzell, Sivadasania N. Mohanan & Pimenov and Vanasushava P.K. Mukh. & Constance are endemic genera to the country. The present communication is an attempt to provide chromosome counts and basic karyomorphology of Karnataka, Pinda, Polyzygus and Vanasushava. Somatic chromosome counts 2n = 22 and meiotic chromosome counts n = 11 are reported for the first time in Karnataka and Pinda while in Polyzygus 2n = 36 and in Vanasushava 2n = 44 are reported as new cytotypes in present investigation. Karyomophologically Pinda and Vanasushava showed affinities with Heracleum L. while Polyzygus showed advanced karyotype symmetry.

  4. SYSTEMATIC REVISION OF THE GENERA OF PANGASIIDAE (SILURIFORMES, OSTARIOPHYSI

    Directory of Open Access Journals (Sweden)

    Rudhy Gustiano

    2008-06-01

    Full Text Available The family Pangasiidae belongs to the suborder Siluroidei, order Siluriformes, and suborder Ostariophysi. Since the groups were established as Pangasiini Bleeker, 1858; its content and classification have been greatly changed. Judging from the literature, the main constraint to cultivate wild species and to optimize the production of cultured species is needed to the poorly documented systematics of this family. Therefore the objective of the present study is to provide the diagnostic characters and the keys for identification the genera of Pangasiidae. The results clearly demonstrate that biometrically four natural groups can be distinguished. They are the genus Helicophagus, Pangasianodon, Pteropangasius, and Pangasius. The diagnosis of the family, the identification key of the genera and the description are given.

  5. Comparative genomics of bifidobacterium, lactobacillus and related probiotic genera

    DEFF Research Database (Denmark)

    Lukjancenko, Oksana; Ussery, David; Wassenaar, Trudy M.

    2012-01-01

    Six bacterial genera containing species commonly used as probiotics for human consumption or starter cultures for food fermentation were compared and contrasted, based on publicly available complete genome sequences. The analysis included 19 Bifidobacterium genomes, 21 Lactobacillus genomes, 4...... Lactococcus and 3 Leuconostoc genomes, as well as a selection of Enterococcus (11) and Streptococcus (23) genomes. The latter two genera included genomes from probiotic or commensal as well as pathogenic organisms to investigate if their non-pathogenic members shared more genes with the other probiotic......- and core genome of each genus were compared. In addition, it was investigated whether pathogenic genomes contain different COG classes compared to the probiotic or fermentative organisms, again comparing their pan- and core genomes. The obtained results were compared with published data from the literature...

  6. Somatic Embryogenesis in Two Orchid Genera (Cymbidium, Dendrobium).

    Science.gov (United States)

    da Silva, Jaime A Teixeira; Winarto, Budi

    2016-01-01

    The protocorm-like body (PLB) is the de facto somatic embryo in orchids. Here we describe detailed protocols for two orchid genera (hybrid Cymbidium Twilight Moon 'Day Light' and Dendrobium 'Jayakarta', D. 'Gradita 31', and D. 'Zahra FR 62') for generating PLBs. These protocols will most likely have to be tweaked for different cultivars as the response of orchids in vitro tends to be dependent on genotype. In addition to primary somatic embryogenesis, secondary (or repetitive) somatic embryogenesis is also described for both genera. The use of thin cell layers as a sensitive tissue assay is outlined for hybrid Cymbidium while the protocol outlined is suitable for bioreactor culture of D. 'Zahra FR 62'.

  7. Laser induced spectroscopy breakdown (LIBS) application to heavy metal detection in soils; Applicazioni della tecnica Laser induced breakdown spectroscopy (LIBS) alla determinazione dei metalli pesanti nei suoli

    Energy Technology Data Exchange (ETDEWEB)

    Barbini, R.; Fantoni, R.; Palucci, A.; Ribezzo, S.; Colao, F. [ENEA, Centro Ricerche Frascati, Frascati, RM (Italy). Div. Fisica Applicata; Capitelli, F. [Bari, Univ., Bari (Italy). Dipt. di Biologia e Chimica Agroforestale ed Ambientale

    2000-07-01

    LIBS (Laser induced breakdown spectroscopy) is a new spectroscopic technique suitable to the use in the analysis of samples of environmental interest, such as soils and rocks, and of industrial interest, such as alloys. Results dealing with the application of the technique to heterogeneous soil samples certified by Ispra Joint Research Centre in the contest of heavy metals (Cd, Cr, Cu, Fe, Mn, Ni, Pb, Zn) with an agronomical interest are presented in this report. In the LIBS technique, a high power laser beam is focused onto the sample in order to generate a small volume of plasma at its surface. Emissions from single atomic species are collected by a lens system coupled to an optical fiber bundle, dispersed on a monochromator and analyzed by an iCCD. the identification and the assignment of emission lines relevant to single atomic species allows to determine the sample elemental composition and, after calibration against reference samples, to perform quantitative analysis for a large number of species. This technique requires no sample pre-treatment, a part from eventually compacting powders by mechanical press. This is a considerable advantage with respect to traditional spectroscopic techniques, such as the ICP (Inductively Coupled Plasma) which needs sample mineralization by acid attack. Measurements performed on soil samples by means of the LIBS technique at ENEA Frascati were compared with the results obtained by ICP, which is considered a traditional technique for this kind of analysis. Results showed a general overestimation of the LIBS values with respect to the ICP ones, probably due to differences in lytologic matrix between the analyzed samples and the standard. The phenomenon is usually referred to the matrix effect, which is held responsible for the deviation from linearity between single element concentration and its row intensity. The effect is due to local plasma density variations and limit the correlation between the plasma elemental composition

  8. Summing over all genera for d>1: A toy model

    International Nuclear Information System (INIS)

    Ambjoern, J.; Durhuus, B.; Jonsson, T.

    1990-04-01

    We consider a reduced model of discretized random surfaces which is believed to be a good approximation to the standard theory of discretized random surfaces for large dimensions d. In this model we observe multicritical behaviour. The relation between internal observables, in the sense of two-dimensional gravity, and external observables, in the sense of string theory, can be studied in detail. Furthermore, it is possible to perform explicitly the summation over all genera in this model. (orig.)

  9. LIBS coupled with ICP/OES for the spectral analysis of betel leaves

    Science.gov (United States)

    Rehan, I.; Rehan, K.; Sultana, S.; Khan, M. Z.; Muhammad, R.

    2018-05-01

    Laser-induced breakdown spectroscopy (LIBS) system was optimized and was applied for the elemental analysis and exposure of the heavy metals in betel leaves in air. Pulsed Nd:YAG (1064 nm) in conjunction with a suitable detector (LIBS 2000+, Ocean Optics, Inc) having the optical resolution of 0.06 nm was used to record the emission spectra from 200 to 720 nm. Elements like Al, Ba, Ca, Cr, Cu, P, Fe, K, Mg, Mn, Na, P, S, Sr, and Zn were found to be present in the samples. The abundances of observed elements were calculated through normalized calibration curve method, integrated intensity ratio method, and calibration free-LIBS approach. Quantitative analyses were accomplished under the assumption of local thermodynamic equilibrium (LTE) and optically thin plasma. LIBS findings were validated by comparing its results with the results obtained using a typical analytical technique of inductively coupled plasma-optical emission spectroscopy (ICP/OES). Limit of detection (LOD) of the LIBS system was also estimated for heavy metals.

  10. LiB and its boron-deficient variants under pressure

    KAUST Repository

    Hermann, Andreas; Suarez-Alcubilla, Ainhoa; Gurtubay, Idoia G.; Yang, Li-Ming; Bergara, Aitor; Ashcroft, N. W.; Hoffmann, Roald

    2012-01-01

    Results of computational investigations of the structural and electronic properties of the ground states of binary compounds LiB x with 0.67 ≤x≤1.00 under pressure are reported. Structure predictions based on evolutionary algorithms and particle swarm optimization reveal that with increasing pressure, stoichiometric 1:1-LiB undergoes a variety of phase transitions, is significantly stabilized with respect to the elements and takes up a diamondoid boron network at high pressures. The Zintl picture is very useful in understanding the evolution of structures with pressure. The experimentally seen finite range of stability for LiB x phases with 0.8≤x≤1.00 is modeled both by boron-deficient variants of the 1:1-LiB structure and lithium-enriched intercalation structures. We find that the finite stability range vanishes at pressures P≥40GPa, where stoichiometric compounds then become more stable. A metal-to-insulator transition for LiB is predicted at P = 70 GPa. © 2012 American Physical Society.

  11. Feasibility of laser-induced breakdown spectroscopy (LIBS) for classification of sea salts.

    Science.gov (United States)

    Tan, Man Minh; Cui, Sheng; Yoo, Jonghyun; Han, Song-Hee; Ham, Kyung-Sik; Nam, Sang-Ho; Lee, Yonghoon

    2012-03-01

    We have investigated the feasibility of laser-induced breakdown spectroscopy (LIBS) as a fast, reliable classification tool for sea salts. For 11 kinds of sea salts, potassium (K), magnesium (Mg), calcium (Ca), and aluminum (Al), concentrations were measured by inductively coupled plasma-atomic emission spectroscopy (ICP-AES), and the LIBS spectra were recorded in the narrow wavelength region between 760 and 800 nm where K (I), Mg (I), Ca (II), Al (I), and cyanide (CN) band emissions are observed. The ICP-AES measurements revealed that the K, Mg, Ca, and Al concentrations varied significantly with the provenance of each salt. The relative intensities of the K (I), Mg (I), Ca (II), and Al (I) peaks observed in the LIBS spectra are consistent with the results using ICP-AES. The principal component analysis of the LIBS spectra provided the score plot with quite a high degree of clustering. This indicates that classification of sea salts by chemometric analysis of LIBS spectra is very promising. Classification models were developed by partial least squares discriminant analysis (PLS-DA) and evaluated. In addition, the Al (I) peaks enabled us to discriminate between different production methods of the salts. © 2012 Society for Applied Spectroscopy

  12. Monitoring of toxic elements present in sludge of industrial waste using CF-LIBS.

    Science.gov (United States)

    Kumar, Rohit; Rai, Awadhesh K; Alamelu, Devanathan; Aggarwal, Suresh K

    2013-01-01

    Industrial waste is one of the main causes of environmental pollution. Laser-induced breakdown spectroscopy (LIBS) was applied to detect the toxic metals in the sludge of industrial waste water. Sludge on filter paper was obtained after filtering the collected waste water samples from different sections of a water treatment plant situated in an industrial area of Kanpur City. The LIBS spectra of the sludge samples were recorded in the spectral range of 200 to 500 nm by focusing the laser light on sludge. Calibration-free laser-induced breakdown spectroscopy (CF-LIBS) technique was used for the quantitative measurement of toxic elements such as Cr and Pb present in the sample. We also used the traditional calibration curve approach to quantify these elements. The results obtained from CF-LIBS are in good agreement with the results from the calibration curve approach. Thus, our results demonstrate that CF-LIBS is an appropriate technique for quantitative analysis where reference/standard samples are not available to make the calibration curve. The results of the present experiment are alarming to the people living nearby areas of industrial activities, as the concentrations of toxic elements are quite high compared to the admissible limits of these substances.

  13. Effective laser-induced breakdown spectroscopy (LIBS) detection using double pulse at optimum configuration.

    Science.gov (United States)

    Choi, Soo Jin; Yoh, Jack J

    2011-08-01

    A short laser pulse is irradiated on a sample to create a highly energetic plasma that emits light of a specific peak wavelength according to the material. By identifying different peaks for the analyzed samples, their chemical composition can be rapidly determined. The characteristics of the laser-induced breakdown spectroscopy (LIBS) plasma are strongly dependent on the ambient conditions. Research aimed at enhancing LIBS intensity is of great benefit in advancing LIBS for the exploration of harsh environments. By using double-pulse LIBS, the signal intensity of Al and Ca lines was enhanced by five times compared to the single-pulse signal. Also, the angles of the target and detector are adjusted to simulate samples of arbitrary shape. We verified that there exists an optimal angle at which specific elements of a test sample may be detected with stronger signal intensity. We provide several optimum configurations for the LIBS system for maximizing the signal intensity for the analysis of a nonstandard aluminum sample.

  14. Long-wave, infrared laser-induced breakdown (LIBS) spectroscopy emissions from energetic materials.

    Science.gov (United States)

    Yang, Clayton S-C; Brown, Ei E; Hommerich, Uwe; Jin, Feng; Trivedi, Sudhir B; Samuels, Alan C; Snyder, A Peter

    2012-12-01

    Laser-induced breakdown spectroscopy (LIBS) has shown great promise for applications in chemical, biological, and explosives sensing and has significant potential for real-time standoff detection and analysis. In this study, LIBS emissions were obtained in the mid-infrared (MIR) and long-wave infrared (LWIR) spectral regions for potential applications in explosive material sensing. The IR spectroscopy region revealed vibrational and rotational signatures of functional groups in molecules and fragments thereof. The silicon-based detector for conventional ultraviolet-visible LIBS operations was replaced with a mercury-cadmium-telluride detector for MIR-LWIR spectral detection. The IR spectral signature region between 4 and 12 μm was mined for the appearance of MIR and LWIR-LIBS emissions directly indicative of oxygenated breakdown products as well as dissociated, and/or recombined sample molecular fragments. Distinct LWIR-LIBS emission signatures from dissociated-recombination sample molecular fragments between 4 and 12 μm are observed for the first time.

  15. Application and development of laser induced breakdown spectroscopy (LIBS) instrumentation for international safeguards

    Energy Technology Data Exchange (ETDEWEB)

    Barefield, II, James E.; Le, Loan; Lopez, Leon; Jolin, John L.; Clegg, Samuel M. [Chemical Diagnostic and Engineering and Physical Chemistry and Spectroscopy Los Alamos National Laboratory, Los Alamos, (United States)

    2011-12-15

    Advanced methodologies and improvements to current measurements techniques are needed to strengthen the effectiveness and efficiency of international safeguards. The primary tool employed by the IAEA to detect undeclared processes and activities at special nuclear material facilities and sites still is environmental sampling. This type of environmental sampling is both time consuming and costly since many samples must be collected, packaged, and shipped to an analytical laboratory for analysis that in some cases can take weeks to months to complete. Los Alamos National Laboratory is currently investigating potential uses of LIBS for safeguards applications, including(1) a user-friendly man-portable LIBS system to characterize samples in real to near-real time (typical analysis time are on the order of minutes) across a wide range of elements in the periodic table from hydrogen up to heavy elements like plutonium and uranium, (2) a LIBS system that can be deployed in harsh environments such as hot cells and glove boxes providing relative compositional analysis of process streams for example, ratios like Cm Division-Slash Pu and Cm Division-Slash / U, (3) an inspector field deployable system that can be used to analyze microscopic and single particle samples containing plutonium and uranium, and (4) a high resolution LIBS system that can be used to determine the isotopic composition of samples containing for example uranium and plutonium. In this paper, we will describe our current development and performance testing results for LIBS instrumentation both in a fixed lab and measurements in field deployable configurations.

  16. LiB and its boron-deficient variants under pressure

    KAUST Repository

    Hermann, Andreas

    2012-10-15

    Results of computational investigations of the structural and electronic properties of the ground states of binary compounds LiB x with 0.67 ≤x≤1.00 under pressure are reported. Structure predictions based on evolutionary algorithms and particle swarm optimization reveal that with increasing pressure, stoichiometric 1:1-LiB undergoes a variety of phase transitions, is significantly stabilized with respect to the elements and takes up a diamondoid boron network at high pressures. The Zintl picture is very useful in understanding the evolution of structures with pressure. The experimentally seen finite range of stability for LiB x phases with 0.8≤x≤1.00 is modeled both by boron-deficient variants of the 1:1-LiB structure and lithium-enriched intercalation structures. We find that the finite stability range vanishes at pressures P≥40GPa, where stoichiometric compounds then become more stable. A metal-to-insulator transition for LiB is predicted at P = 70 GPa. © 2012 American Physical Society.

  17. Ultrasonic Nebulizer Assisted LIBS: a Promising Metal Elements Detection Method for Aqueous Sample Analysis

    International Nuclear Information System (INIS)

    Zhong Shilei; Zheng Ronger; Lu Yuan; Cheng Kai; Xiu Junshan

    2015-01-01

    A newly developed approach for trace metal elements detection for aqueous samples analysis is presented in this paper. The idea of this approach is to improve ablation efficiency by transforming the liquid sample into a dense cloud of droplets using an ultrasonic nebulizer. The resulting droplets are then subjected to analysis by laser induced breakdown spectroscopy (LIBS). A purpose-built ultrasonic nebulizer assisted LIBS (UN-LIBS) system has been applied to the analysis of aqueous samples at trace levels of concentration. Experimental investigations of solution samples were carried out with various dissolved trace metal elements (Mn, Zn, Cu, Pb, Fe, Mg and Na) using this approach. The characteristics of UN-LIBS signal of the elements were investigated regarding the lifetime and S/B ratio and the calibration curves for trace metal elements analyses. The obtained LODs are comparable or much better than the LODS of the reported signal enhancement approaches when the laser pulse energy was as low as 30 mJ. The good linearity of calibration curves and the low LODs shows the potential ability of this method for metal elements analysis application. The density of the electrons was calculated by measuring the Stark width of the line of H α . The possible mechanism of the LIBS signal enhancement of this approach was briefly discussed. (paper)

  18. LIBS: study of elemental profile of different layers of the optical window of Tokamak

    International Nuclear Information System (INIS)

    Maurya, Gulab Singh; Jyotsna, Aradhana; Rai, Awadhesh Kumar; Ajai Kumar

    2012-01-01

    In the Tokamak, during confinement of plasma, impurities are deposited on optical window, mirror, limiters, etc. of the tokamak. Thus a layer of impurity on the surface of the optical window causes less visibility which creates problem in the study of plasma parameters and other diagnostics of the plasma generated in the tokamak. Laser Induced Breakdown Spectroscopy (LIBS) is a useful atomic spectroscopic technique for analysis of materials in any phase (Solid, Liquid, Gas etc). LIBS spectra of optical window have been recorded in the spectral range of 200-500 nm. In present study we have focused laser on the surface of the window, to study the layer-wise elemental profile of optical window, we have recorded the LIBS spectra with increasing number of laser shots on the same point of the window. In first laser shot, spectral signature of Cr, Fe, and Ni etc. are present in the LIBS spectra, which is related with the impurity but after five to six laser shots at the same point of the optical window spectral signature Si, B are observed which is related to the glass material. Thus our study demonstrates the capability of LIBS as an in-situ monitoring tool for detection of elemental profile in different layers of optical window of the Tokamak. (author)

  19. Feasibility Study for Monitoring Actinide Elements in Process Materials Using FO-LIBS at Advanced spent fuel Conditioning Process Facility

    Energy Technology Data Exchange (ETDEWEB)

    Han, Bo-Young; Choi, Daewoong; Park, Se Hwan; Kim, Ho-Dong [Nonproliferation System Research Division, Korea Atomic Energy Research Institute, Daejeon, 305-353 (Korea, Republic of); Dae, Dongsun [Department of Chemistry, Mokpo National University, Jeonnam 534-729 (Korea, Republic of); Whitehouse, Andrew I. [Applied Photonics Ltd., Unit 8 Carleton Business Park, Skipton, North Yorkshire BD23 2DE (United Kingdom)

    2015-07-01

    Korea Atomic Energy Research Institute (KAERI) have been developing the design and deployment methodology of Laser- Induced Breakdown Spectroscopy (LIBS) instrument for safeguards application within the argon hot cell environment at Advanced spent fuel Conditioning Process Facility (ACPF), where ACPF is a facility being refurbished for the laboratory-scaled demonstration of advanced spent fuel conditioning process. LIBS is an analysis technology used to measure the emission spectra of excited elements in the local plasma of a target material induced by a laser. The spectra measured by LIBS are analyzed to verify the quality and quantity of the specific element in the target matrix. Recently LIBS has been recognized as a promising technology for safeguards purposes in terms of several advantages including a simple sample preparation and in-situ analysis capability. In particular, a feasibility study of LIBS to remotely monitor the nuclear material in a high radiation environment has been carried out for supporting the IAEA safeguards implementation. Fiber-Optic LIBS (FO-LIBS) deployment was proposed by Applied Photonics Ltd because the use of fiber optics had benefited applications of LIBS by delivering the laser energy to the target and by collecting the plasma light. The design of FO-LIBS instrument for the measurement of actinides in the spent fuel and high temperature molten salt at ACPF had been developed in cooperation with Applied Photonics Ltd. FO-LIBS has some advantages as followings: the detectable plasma light wavelength range is not limited by the optical properties of the thick lead-glass shield window and the potential risk of laser damage to the lead-glass shield window is not considered. The remote LIBS instrument had been installed at ACPF and then the feasibility study for monitoring actinide elements such as uranium, plutonium, and curium in process materials has been carried out. (authors)

  20. Feasibility Study for Monitoring Actinide Elements in Process Materials Using FO-LIBS at Advanced spent fuel Conditioning Process Facility

    International Nuclear Information System (INIS)

    Han, Bo-Young; Choi, Daewoong; Park, Se Hwan; Kim, Ho-Dong; Dae, Dongsun; Whitehouse, Andrew I.

    2015-01-01

    Korea Atomic Energy Research Institute (KAERI) have been developing the design and deployment methodology of Laser- Induced Breakdown Spectroscopy (LIBS) instrument for safeguards application within the argon hot cell environment at Advanced spent fuel Conditioning Process Facility (ACPF), where ACPF is a facility being refurbished for the laboratory-scaled demonstration of advanced spent fuel conditioning process. LIBS is an analysis technology used to measure the emission spectra of excited elements in the local plasma of a target material induced by a laser. The spectra measured by LIBS are analyzed to verify the quality and quantity of the specific element in the target matrix. Recently LIBS has been recognized as a promising technology for safeguards purposes in terms of several advantages including a simple sample preparation and in-situ analysis capability. In particular, a feasibility study of LIBS to remotely monitor the nuclear material in a high radiation environment has been carried out for supporting the IAEA safeguards implementation. Fiber-Optic LIBS (FO-LIBS) deployment was proposed by Applied Photonics Ltd because the use of fiber optics had benefited applications of LIBS by delivering the laser energy to the target and by collecting the plasma light. The design of FO-LIBS instrument for the measurement of actinides in the spent fuel and high temperature molten salt at ACPF had been developed in cooperation with Applied Photonics Ltd. FO-LIBS has some advantages as followings: the detectable plasma light wavelength range is not limited by the optical properties of the thick lead-glass shield window and the potential risk of laser damage to the lead-glass shield window is not considered. The remote LIBS instrument had been installed at ACPF and then the feasibility study for monitoring actinide elements such as uranium, plutonium, and curium in process materials has been carried out. (authors)

  1. Gallium Content in PuO2 Using Laser Induced Breakdown Spectroscopy (LIBS)

    International Nuclear Information System (INIS)

    Smith, C.A.; Martinez, M.A.; Veirs, D.K.

    1999-01-01

    Laser Induced Breakdown Spectroscopy (LIBS) has been applied to the semi-quantitative analysis of gallium in plutonium oxide at the Los Alamos Plutonium Facility. The oxide samples were generated by the Thermally Induced Gallium Removal (TIGR) process, a pretreatment step prior to MOX fuel processing. The TIGR process uses PuO 2 containing 1 wt% gallium (nominal) as feed material. Following the TIGR process, gallium content was analyzed by LIBS and also by conventional wet chemical analysis (ICP-MS). Although the data range was insufficient to obtain an adequate calibration, general agreement between the two techniques was good. LIBS was found to have a useful analytical range of 34-400 ppm for Ga in PuO 2

  2. Study of atomic and molecular emission spectra of Sr by laser induced breakdown spectroscopy (LIBS).

    Science.gov (United States)

    Bhatt, Chet R; Alfarraj, Bader; Ayyalasomayajula, Krishna K; Ghany, Charles; Yueh, Fang Y; Singh, Jagdish P

    2015-12-01

    Laser Induced Breakdown Spectroscopy (LIBS) is an ideal analytical technique for in situ analysis of elemental composition. We have performed a comparative study of the quantitative and qualitative analysis of atomic and molecular emission from LIBS spectra. In our experiments, a mixture of SrCl2 and Al2O3 in powder form was used as a sample. The atomic emission from Sr and molecular emission from SrCl and SrO observed in LIBS spectra were analyzed. The optimum laser energies, gate delays, and gate widths for selected atomic lines and molecular bands were determined from spectra recorded at various experimental parameters. These optimum experimental conditions were used to collect calibration data, and the calibration curves were used to predict the Sr concentration. Limits of detection (LODs) for selected atomic and molecular emission spectra were determined.

  3. Analysis of LiSn alloy at several depths using LIBS

    Energy Technology Data Exchange (ETDEWEB)

    Suchoňová, M., E-mail: maria.suchonova@fmph.uniba.sk [Dept. of Experimental Physics, Faculty of Mathematics Physics and Informatics, Comenius University in Bratislava, Mlynská dolina F2, 842 48 Bratislava (Slovakia); Krištof, J.; Pribula, M. [Dept. of Experimental Physics, Faculty of Mathematics Physics and Informatics, Comenius University in Bratislava, Mlynská dolina F2, 842 48 Bratislava (Slovakia); Veis, M. [Dept. of Inorganic Chemistry, Faculty of Natural Science, Comenius University, Mlynská dolina, Ilkovičova 6, 842 15 Bratislava 4 (Slovakia); Tabarés, F.L. [Fusion Department, Ciemat, Av Complutense 40, 28040 Madrid (Spain); Veis, P., E-mail: pavel.veis@fmph.uniba.sk [Dept. of Experimental Physics, Faculty of Mathematics Physics and Informatics, Comenius University in Bratislava, Mlynská dolina F2, 842 48 Bratislava (Slovakia)

    2017-04-15

    The difference between the composition of the surface and the inner part of the LiSn sample was studied using Calibration Free Laser Induced Breakdown Spectroscopy (CF-LIBS) method. The sample was analysed under the low pressure (1330 Pa) in Ar atmosphere. The spectra were record using Echelle spectrometer (Mechelle ME5000). Gate delay and gate width was optimised and set to 300 ns. In order to analyse depth profile the LIBS spectra was recorded after each laser shot. The electron density analysed by laser induced plasma was determined separately for each laser shot, which means for each ablated layer of investigated sample. The difference between the individual shots taken at distinct sites of the sample are shown. The CF-LIBS method was used to determine the elemental composition near the surface and in the central part of the LiSn sample.

  4. Studies of Basalt Through Laser Induced Breakdown Spectroscopy (LIBS for the Manufacturing of Lapilli Blocks

    Directory of Open Access Journals (Sweden)

    Ismael De la Viuda-Pérez

    2016-10-01

    Full Text Available Basaltic samples selected from different areas of Tenerife were analyzed by applying laser induced breakdown spectroscopy (LIBS, Raman spectroscopy and X Ray Diffraction (XRD in order to identify the basic chemical composition and mineralogy. The basic composition obtained from the analysis was: O, F, Na, K, Mg, Al Si, Ca, Ti and Fe. Raman spectroscopic and XRD analyses indicated a basaltic mineralogy which is consistent with the basic composition results obtained from LIBS. The results of the analyses carried out using portable instrumentation proved the suitability of the LIBS, specially combined with the Raman spectroscopy for their application in the mineralogical-chemical identification in the areas where basalts and lapilli are extracted for construction works in Tenerife.

  5. [Quantitative analysis of Cu in water by collinear DP-LIBS].

    Science.gov (United States)

    Zheng, Mei-Lan; Yao, Ming-Yin; Chen, Tian-Bing; Lin, Yong-Zeng; Li, Wen-Bing; Liu, Mu-Hua

    2014-07-01

    The purpose of this research is to study the influence of double pulse laser induced breakdown spectroscopy (DP-LIBS) on the sensitivity of Cu in water. The water solution of Cu was tested by collinear DP-LIBS in this article. The results show that spectral intensity of Cu can be enhanced obviously by DP-LIBS, compared with single pulse laser induced breakdown spectroscopy (SP-LIBS). Besides, the experimental results were significantly impacted by delay time between laser pulse and spectrometer acquisition, delay time of double laser pulse and energy of laser pulse and so on. The paper determined the best conditions for DP-LIBS detecting Cu in water. The optimal acquisition delay time was 1 380 ns. The best laser pulse delay time was 25 ns. The most appropriate energy of double laser pulse was 100 mJ. Characteristic analysis of spectra of Cu at 324.7 and 327.4 nm was done for quantitative analysis. The detection limit was 3.5 microg x mL(-1) at 324.7 nm, and the detection limit was 4.84 microg x mL(-1) at 327.4 nm. The relative standard deviation of the two characteristic spectral lines was within 10%. The calibration curve of characteristic spectral line, established by 327.4 nm, was verified with 500 microg x mL(-1) sample. Concentration of the sample was 446 microg x mL(-1) calculated by the calibration curve. This research shows that the detection sensitivity of Cu in water can be improved by DP-LIBS. At the same time, it had high stability.

  6. libChEBI: an API for accessing the ChEBI database.

    Science.gov (United States)

    Swainston, Neil; Hastings, Janna; Dekker, Adriano; Muthukrishnan, Venkatesh; May, John; Steinbeck, Christoph; Mendes, Pedro

    2016-01-01

    ChEBI is a database and ontology of chemical entities of biological interest. It is widely used as a source of identifiers to facilitate unambiguous reference to chemical entities within biological models, databases, ontologies and literature. ChEBI contains a wealth of chemical data, covering over 46,500 distinct chemical entities, and related data such as chemical formula, charge, molecular mass, structure, synonyms and links to external databases. Furthermore, ChEBI is an ontology, and thus provides meaningful links between chemical entities. Unlike many other resources, ChEBI is fully human-curated, providing a reliable, non-redundant collection of chemical entities and related data. While ChEBI is supported by a web service for programmatic access and a number of download files, it does not have an API library to facilitate the use of ChEBI and its data in cheminformatics software. To provide this missing functionality, libChEBI, a comprehensive API library for accessing ChEBI data, is introduced. libChEBI is available in Java, Python and MATLAB versions from http://github.com/libChEBI, and provides full programmatic access to all data held within the ChEBI database through a simple and documented API. libChEBI is reliant upon the (automated) download and regular update of flat files that are held locally. As such, libChEBI can be embedded in both on- and off-line software applications. libChEBI allows better support of ChEBI and its data in the development of new cheminformatics software. Covering three key programming languages, it allows for the entirety of the ChEBI database to be accessed easily and quickly through a simple API. All code is open access and freely available.

  7. Comparison of LIBS and {mu}-XRF measurements on bronze alloys for monitoring plasma effects

    Energy Technology Data Exchange (ETDEWEB)

    Alberghina, M F; Barraco, R; Brai, M; Schillaci, T; Tranchina, L, E-mail: tschillaci@unipa.it [Dipartimento di Fisica e Tecnologie Relative, Universita di Palermo, Viale delle Scienze Ed. 18, 90128 Palermo (Italy)

    2011-01-01

    The laser-induced breakdown spectroscopy (LIBS) technique is often used as atomic spectroscopic technique for elemental analysis of materials. However, it presents some drawbacks that make an accurate quantitative analysis difficult. Since the plasma properties, such as spatial inhomogeneity and plume stoichiometry strongly depend on the experimental conditions, the measurements are less reproducible. In order to evaluate the measurement fluctuations, we propose to use the more established micro X-Ray fluorescence ({mu}-XRF) technique for validating LIBS data. In particular, the quantitative data, obtained by varying the laser fluence, the shot numbers and the temporal acquisition parameters, were compared with those obtained by {mu}-XRF on laboratory made samples of binary, ternary and quaternary bronze alloys. For LIBS measurements a mobile double pulse laser instrument equipped with an high resolution Echelle type monochromator coupled to an intensified CCD camera was used. {mu}-XRF analyses were performed with a portable instrument that uses a micro collimated X-Ray beam and it is equipped with an high resolution detector. The LIBS results show a strong dependence both on the instrumental set up and the chemical-physical properties of the sample. With our findings we could identify the most suitable parameters to be used in the investigation of the different bronze alloys. The possibility to carry out a quantitative analysis by using the LIBS technique was checked through the comparison with related {mu}-XRF data. In particular in this paper we identified a set of reliable LIBS parameters for the quantitative analysis of copper, tin and zinc. Further analyses will be necessary to reach this goal also for the minor constituents as lead.

  8. Twelve previously unknown phage genera are ubiquitous in global oceans.

    Science.gov (United States)

    Holmfeldt, Karin; Solonenko, Natalie; Shah, Manesh; Corrier, Kristen; Riemann, Lasse; Verberkmoes, Nathan C; Sullivan, Matthew B

    2013-07-30

    Viruses are fundamental to ecosystems ranging from oceans to humans, yet our ability to study them is bottlenecked by the lack of ecologically relevant isolates, resulting in "unknowns" dominating culture-independent surveys. Here we present genomes from 31 phages infecting multiple strains of the aquatic bacterium Cellulophaga baltica (Bacteroidetes) to provide data for an underrepresented and environmentally abundant bacterial lineage. Comparative genomics delineated 12 phage groups that (i) each represent a new genus, and (ii) represent one novel and four well-known viral families. This diversity contrasts the few well-studied marine phage systems, but parallels the diversity of phages infecting human-associated bacteria. Although all 12 Cellulophaga phages represent new genera, the podoviruses and icosahedral, nontailed ssDNA phages were exceptional, with genomes up to twice as large as those previously observed for each phage type. Structural novelty was also substantial, requiring experimental phage proteomics to identify 83% of the structural proteins. The presence of uncommon nucleotide metabolism genes in four genera likely underscores the importance of scavenging nutrient-rich molecules as previously seen for phages in marine environments. Metagenomic recruitment analyses suggest that these particular Cellulophaga phages are rare and may represent a first glimpse into the phage side of the rare biosphere. However, these analyses also revealed that these phage genera are widespread, occurring in 94% of 137 investigated metagenomes. Together, this diverse and novel collection of phages identifies a small but ubiquitous fraction of unknown marine viral diversity and provides numerous environmentally relevant phage-host systems for experimental hypothesis testing.

  9. Identifikasi Unsur Radioaktif Pada Batako Ringan Aerasi Citicon Dengan Metode Laser Induced Breakdown Spectroscopy (LIBS

    Directory of Open Access Journals (Sweden)

    Wahyulianti Wahyulianti

    2016-02-01

    Full Text Available Research has been done to identify the radioactive elements in the Citicon aerated lightweight concrete block sample. In this research used a Citicon aerated lightweight concrete block as a sample with 1 cm x 3 cm in size and identification process used LIBS method. Radioactive elements identified in Citicon aerated lightweight concrete block the LIBS method were Th, Ra, and K. The number of photon emission intensity at the wavelength of each element is 396.710 nm, 620.033 nm, and 766.497 nm respectively by 62.33 a.u, 1.67 a.u, and 72.75 a.u.

  10. Lithium tri borate (LiB3O5) embedded polymer electret for mechanical sensing application

    Science.gov (United States)

    Murugan, S.; Praveen, E.; Prasad, M. V. N.; Jayakumar, K.

    2017-05-01

    Lithium tri borate (LiB3O5) particles were synthesized by precipitation assisted high temperature solid state reaction. The particles were embedded in chitosan polymer and used as an electret. This electret was characterized for the suitability as a sensing element in vibration accelerometer. It is observed that LiB3O5 embedded electret exhibiting piezoelectric property. The electret is also giving an isolation of > 999 MΩ at 100 Vdc, 250 Vdc, 500 Vdc and 1kVdc confirms compatible for intrinsically safe sensing alternative in vibration accelerometer.

  11. Secular Variation and Physical Characteristics Determination of the HADS Star EH Lib

    Science.gov (United States)

    Pena, J. H.; Villarreal, C.; Pina, D. S.; Renteria, A.; Soni, A., Guillen, J. Calderon, J.

    2017-12-01

    Physical parameters of EH Lib have been determined based on observations carried out in 2015 with photometry. They have also served, along with samples from the years 1969 and 1986, to analyse the frequency content of EH Lib with Fourier Transforms. Recent CCD observations increased the times of maximum with twelve new times which helped us study the secular variation of the period with a method based on the minimization of the standard deviation of the O-C residuals. It is concluded that there may be a long-term period change.

  12. Determination of Rare Earth Elements in Geological Samples Using Laser-Induced Breakdown Spectroscopy (LIBS).

    Science.gov (United States)

    Bhatt, Chet R; Jain, Jinesh C; Goueguel, Christian L; McIntyre, Dustin L; Singh, Jagdish P

    2018-01-01

    Laser-induced breakdown spectroscopy (LIBS) was used to detect rare earth elements (REEs) in natural geological samples. Low and high intensity emission lines of Ce, La, Nd, Y, Pr, Sm, Eu, Gd, and Dy were identified in the spectra recorded from the samples to claim the presence of these REEs. Multivariate analysis was executed by developing partial least squares regression (PLS-R) models for the quantification of Ce, La, and Nd. Analysis of unknown samples indicated that the prediction results of these samples were found comparable to those obtained by inductively coupled plasma mass spectrometry analysis. Data support that LIBS has potential to quantify REEs in geological minerals/ores.

  13. Elliptic Genera of Symmetric Products and Second Quantized Strings

    CERN Document Server

    Dijkgraaf, R; Verlinde, Erik; Verlinde, Herman L

    1997-01-01

    In this note we prove an identity that equates the elliptic genus partition function of a supersymmetric sigma model on the $N$-fold symmetric product $M^N/S_N$ of a manifold $M$ to the partition function of a second quantized string theory on the space $M \\times S^1$. The generating function of these elliptic genera is shown to be (almost) an automorphic form for $O(3,2,\\Z)$. In the context of D-brane dynamics, this result gives a precise computation of the free energy of a gas of D-strings inside a higher-dimensional brane.

  14. Temperature and Electron Density Determination on Laser-Induced Breakdown Spectroscopy (LIBS) Plasmas: A Physical Chemistry Experiment

    Science.gov (United States)

    Najarian, Maya L.; Chinni, Rosemarie C.

    2013-01-01

    This laboratory is designed for physical chemistry students to gain experience using laser-induced breakdown spectroscopy (LIBS) in understanding plasma diagnostics. LIBS uses a high-powered laser that is focused on the sample causing a plasma to form. The emission of this plasma is then spectrally resolved and detected. Temperature and electron…

  15. Loading of deuterium and helium by Pilot-PSI plasma and their detection by in-situ LIBS

    NARCIS (Netherlands)

    Piip, K.; van der Meiden, H. J.; Bystrov, K.; Hämarik, L.; Karhunen, J.; Aints, M.; Laan, M.; Paris, P.; Seemen, H.; Hakola, A.; Brezinsek, S.

    2017-01-01

    Laser-induced breakdown spectroscopy (LIBS) is a promising method for quantifying the fuel content of the plasma-facing components of ITER both in between plasma discharges (in-situ) and after maintenance operations. The aim of the present study is to test the applicability of in-situ LIBS for

  16. A checklist and adult key to the Chinese stonefly (Plecoptera) genera.

    Science.gov (United States)

    Chen, Zhi-Teng; Du, Yu-Zhou

    2018-01-23

    The first checklist of the known stonefly genera of China is presented. Using relevant literature and available specimens, a diagnostic key to the ten families representing 65 genera is provided. In addition, illustrations for the key characters are provided.

  17. Redefinition of the genera Malaxis Sol. ex Sw. and Microstylis (Nutt. Eaton (Orchidaceae, Epidendroideae

    Directory of Open Access Journals (Sweden)

    Dariusz L. Szlachetko

    2011-01-01

    Full Text Available A new definition of the genera Malaxis Sol. ex Sw. and Microstylis (Nutt. Eaton is presented. The genera are briefly described and illustrated. A list of Microstylis species is added. Four new nomenclatural combinations are proposed.

  18. Laser induced spectroscopy breakdown (LIBS) application to heavy metal detection in soils

    International Nuclear Information System (INIS)

    Barbini, R.; Fantoni, R.; Palucci, A.; Ribezzo, S.; Colao, F.; Capitelli, F.

    2000-01-01

    LIBS (Laser induced breakdown spectroscopy) is a new spectroscopic technique suitable to the use in the analysis of samples of environmental interest, such as soils and rocks, and of industrial interest, such as alloys. Results dealing with the application of the technique to heterogeneous soil samples certified by Ispra Joint Research Centre in the contest of heavy metals (Cd, Cr, Cu, Fe, Mn, Ni, Pb, Zn) with an agronomical interest are presented in this report. In the LIBS technique, a high power laser beam is focused onto the sample in order to generate a small volume of plasma at its surface. Emissions from single atomic species are collected by a lens system coupled to an optical fiber bundle, dispersed on a monochromator and analyzed by an iCCD. the identification and the assignment of emission lines relevant to single atomic species allows to determine the sample elemental composition and, after calibration against reference samples, to perform quantitative analysis for a large number of species. This technique requires no sample pre-treatment, a part from eventually compacting powders by mechanical press. This is a considerable advantage with respect to traditional spectroscopic techniques, such as the ICP (Inductively Coupled Plasma) which needs sample mineralization by acid attack. Measurements performed on soil samples by means of the LIBS technique at ENEA Frascati were compared with the results obtained by ICP, which is considered a traditional technique for this kind of analysis. Results showed a general overestimation of the LIBS values with respect to the ICP ones, probably due to differences in lytologic matrix between the analyzed samples and the standard. The phenomenon is usually referred to the matrix effect, which is held responsible for the deviation from linearity between single element concentration and its row intensity. The effect is due to local plasma density variations and limit the correlation between the plasma elemental composition

  19. Laser-induced breakdown spectroscopy (LIBS): an overview of recent progress and future potential for biomedical applications.

    Science.gov (United States)

    Rehse, S J; Salimnia, H; Miziolek, A W

    2012-02-01

    The recent progress made in developing laser-induced breakdown spectroscopy (LIBS) has transformed LIBS from an elemental analysis technique to one that can be applied for the reagentless analysis of molecularly complex biological materials or clinical specimens. Rapid advances in the LIBS technology have spawned a growing number of recently published articles in peer-reviewed journals which have consistently demonstrated the capability of LIBS to rapidly detect, biochemically characterize and analyse, and/or accurately identify various biological, biomedical or clinical samples. These analyses are inherently real-time, require no sample preparation, and offer high sensitivity and specificity. This overview of the biomedical applications of LIBS is meant to summarize the research that has been performed to date, as well as to suggest to health care providers several possible specific future applications which, if successfully implemented, would be significantly beneficial to humankind.

  20. Deep Multi-Task Learning for Tree Genera Classification

    Science.gov (United States)

    Ko, C.; Kang, J.; Sohn, G.

    2018-05-01

    The goal for our paper is to classify tree genera using airborne Light Detection and Ranging (LiDAR) data with Convolution Neural Network (CNN) - Multi-task Network (MTN) implementation. Unlike Single-task Network (STN) where only one task is assigned to the learning outcome, MTN is a deep learning architect for learning a main task (classification of tree genera) with other tasks (in our study, classification of coniferous and deciduous) simultaneously, with shared classification features. The main contribution of this paper is to improve classification accuracy from CNN-STN to CNN-MTN. This is achieved by introducing a concurrence loss (Lcd) to the designed MTN. This term regulates the overall network performance by minimizing the inconsistencies between the two tasks. Results show that we can increase the classification accuracy from 88.7 % to 91.0 % (from STN to MTN). The second goal of this paper is to solve the problem of small training sample size by multiple-view data generation. The motivation of this goal is to address one of the most common problems in implementing deep learning architecture, the insufficient number of training data. We address this problem by simulating training dataset with multiple-view approach. The promising results from this paper are providing a basis for classifying a larger number of dataset and number of classes in the future.

  1. Getting More Value from the LibQUAL+® Survey: The Merits of Qualitative Analysis and Importance-Satisfaction Matrices in Assessing Library Patron Comments

    Science.gov (United States)

    Detlor, Brian; Ball, Kathryn

    2015-01-01

    This paper examines the merit of conducting a qualitative analysis of LibQUAL+® survey comments as a means of leveraging quantitative LibQUAL+ results, and using importance-satisfaction matrices to present and assess qualitative findings. Comments collected from the authors' institution's LibQUAL+ survey were analyzed using a codebook based on…

  2. An Exploratory study on the use of LibAnswers to Resolve, Track and Monitor Electronic Resources Issues: The KAUST Library experience

    KAUST Repository

    Ramli, Rindra M.

    2017-01-01

    An Exploratory study on KAUST library use of LibAnswers in resolving electronic resources questions received in LibAnswers. It describes the findings of the questions received in LibAnswers. The author made suggestions based on the findings to improve the reference services in responding to e-resources questions.

  3. An Exploratory study on the use of LibAnswers to Resolve, Track and Monitor Electronic Resources Issues: The KAUST Library experience

    KAUST Repository

    Ramli, Rindra M.

    2017-05-03

    An Exploratory study on KAUST library use of LibAnswers in resolving electronic resources questions received in LibAnswers. It describes the findings of the questions received in LibAnswers. The author made suggestions based on the findings to improve the reference services in responding to e-resources questions.

  4. Single-shot LIBS spectral quality for waste particles in open air

    NARCIS (Netherlands)

    Xia, H.; Bakker, M.C.M.

    2015-01-01

    This work investigates the ability of LIBS to produce quality spectra from small particles of concrete demolition waste using single-shot spectra collected in open air. The 2–8?mm materials are rounded river gravel, green glass shards, and plastic flakes. Considered are focal length, air, moisture,

  5. Moon4You : a combined Raman/LIBS instrument for lunar exploration

    NARCIS (Netherlands)

    Laan, E.C.; Ahlers, B.; Westrenen, W.V.; Heiligers, J.; Wielders, A.

    2009-01-01

    Moon4You is a project led by the Dutch Organisation for Applied Scientific Research TNO, with partners from industry and universities in the Netherlands that aims to provide a combined Raman/LIBS instrument as scientific payload for lunar exploration missions. It is the first time that Raman

  6. [Rapid multi-elemental analysis on four precious Tibetan medicines based on LIBS technique].

    Science.gov (United States)

    Liu, Xiao-na; Shi, Xin-yuan; Jia, Shuai-yun; Zhao, Na; Wu, Zhi-sheng; Qiao, Yan-jiang

    2015-06-01

    The laser-induced breakdown spectroscopy (LIBS) was applied to perform a qualitative elementary analysis on four precious Tibetan medicines, i. e. Renqing Mangjue, Renqing Changjue, 25-herb coral pills and 25-herb pearl pills. The specific spectra of the four Tibetan medicines were established. In the experiment, Nd: YAG and 1 064 nm-baseband pulse laser were adopted to collect the spectra. A laser beam focused on the surface of the samples to generate plasma. Its spectral signal was detected by using spectrograph. Based on the National Institute of Standard and Technology (NIST) database, LIBS spectral lines were indentified. The four Tibetan medicines mainly included Ca, Na, K, Mg and other elements and C-N molecular band. Specifically, Fe was detected in Renqing Changjue and 25-herb pearl pills; heavy mental elements Hg and Cu were shown in Renqing Mangjue and Renqing Changjue; Ag was found in Renqing Changjue. The results demonstrated that LIBS is a reliable and rapid multi-element analysis on the four Tibetan medicines. With Real-time, rapid and nondestructive advantages, LIBS has a wide application prospect in the element analysis on ethnic medicines.

  7. Advanced recognition of explosives in traces on polymer surfaces using LIBS and supervised learning classifiers.

    Science.gov (United States)

    Serrano, Jorge; Moros, Javier; Sánchez, Carlos; Macías, Jorge; Laserna, J Javier

    2014-01-02

    The large similarity existing in the spectral emissions collected from organic compounds by laser-induced breakdown spectroscopy (LIBS) is a limiting factor for the use of this technology in the real world. Specifically, among the most ambitious challenges of today's LIBS involves the recognition of an organic residue when neglected on the surface of an object of identical nature. Under these circumstances, the development of an efficient algorithm to disclose the minute differences within this highly complex spectral information is crucial for a realistic application of LIBS in countering explosive threats. An approach cemented on scatter plots of characteristic emission features has been developed to identify organic explosives when located on polymeric surfaces (teflon, nylon and polyethylene). By using selected spectral variables, the approach allows to design a concise classifier for alerting when one of four explosives (DNT, TNT, RDX and PETN) is present on the surface of the polymer. Ordinary products (butter, fuel oil, hand cream, olive oil and motor oil) cause no confusion in the decisions taken by the classifier. With rates of false negatives and false positives below 5%, results demonstrate that the classification algorithm enables to label residues according to their harmful nature in the most demanding scenario for a LIBS sensor. Copyright © 2013 Elsevier B.V. All rights reserved.

  8. Decomposition and correction overlapping peaks of LIBS using an error compensation method combined with curve fitting.

    Science.gov (United States)

    Tan, Bing; Huang, Min; Zhu, Qibing; Guo, Ya; Qin, Jianwei

    2017-09-01

    The laser induced breakdown spectroscopy (LIBS) technique is an effective method to detect material composition by obtaining the plasma emission spectrum. The overlapping peaks in the spectrum are a fundamental problem in the qualitative and quantitative analysis of LIBS. Based on a curve fitting method, this paper studies an error compensation method to achieve the decomposition and correction of overlapping peaks. The vital step is that the fitting residual is fed back to the overlapping peaks and performs multiple curve fitting processes to obtain a lower residual result. For the quantitative experiments of Cu, the Cu-Fe overlapping peaks in the range of 321-327 nm obtained from the LIBS spectrum of five different concentrations of CuSO 4 ·5H 2 O solution were decomposed and corrected using curve fitting and error compensation methods. Compared with the curve fitting method, the error compensation reduced the fitting residual about 18.12-32.64% and improved the correlation about 0.86-1.82%. Then, the calibration curve between the intensity and concentration of the Cu was established. It can be seen that the error compensation method exhibits a higher linear correlation between the intensity and concentration of Cu, which can be applied to the decomposition and correction of overlapping peaks in the LIBS spectrum.

  9. Evaluation of the efficacy of a portable LIBS system for detection of CWA on surfaces.

    Science.gov (United States)

    L'Hermite, D; Vors, E; Vercouter, T; Moutiers, G

    2016-05-01

    Laser-induced breakdown spectroscopy (LIBS) is a laser-based optical technique particularly suited for in situ surface analysis. A portable LIBS instrument was tested to detect surface chemical contamination by chemical warfare agents (CWAs). Test of detection of surface contamination was carried out in a toxlab facility with four CWAs, sarin (GB), lewisite (L1), mustard gas (HD), and VX, which were deposited on different substrates, wood, concrete, military green paint, gloves, and ceramic. The CWAs were detected by means of the detection of atomic markers (As, P, F, Cl, and S). The LIBS instrument can give a direct response in terms of detection thanks to an integrated interface for non-expert users or so called end-users. We have evaluated the capability of automatic detection of the selected CWAs. The sensitivity of our portable LIBS instrument was confirmed for the detection of a CWA at surface concentrations above 15 μg/cm(2). The simultaneous detection of two markers may lead to a decrease of the number of false positive.

  10. Controlled laser cleaning of artworks via low resolution LIBS and linear correlation analysis

    NARCIS (Netherlands)

    Lentjes, M.; Dickmann, Klaus; Meijer, J.; Ostendof, A.; Hoult, A.; Lu, Y.

    2005-01-01

    Based on a fibre optic miniature spectrometer (spectral range 200-1100 nm, λ-resolution 2 nm) we have built up a LIBS-system (Laser Induced Breakdown Spectroscopy) for online monitoring during laser cleaning of artworks. This system is unsuitable for high resolved elemental identification but is

  11. Detection of Anomalies in Citrus Leaves Using Laser-Induced Breakdown Spectroscopy (LIBS).

    Science.gov (United States)

    Sankaran, Sindhuja; Ehsani, Reza; Morgan, Kelly T

    2015-08-01

    Nutrient assessment and management are important to maintain productivity in citrus orchards. In this study, laser-induced breakdown spectroscopy (LIBS) was applied for rapid and real-time detection of citrus anomalies. Laser-induced breakdown spectroscopy spectra were collected from citrus leaves with anomalies such as diseases (Huanglongbing, citrus canker) and nutrient deficiencies (iron, manganese, magnesium, zinc), and compared with those of healthy leaves. Baseline correction, wavelet multivariate denoising, and normalization techniques were applied to the LIBS spectra before analysis. After spectral pre-processing, features were extracted using principal component analysis and classified using two models, quadratic discriminant analysis and support vector machine (SVM). The SVM resulted in a high average classification accuracy of 97.5%, with high average canker classification accuracy (96.5%). LIBS peak analysis indicated that high intensities at 229.7, 247.9, 280.3, 393.5, 397.0, and 769.8 nm were observed of 11 peaks found in all the samples. Future studies using controlled experiments with variable nutrient applications are required for quantification of foliar nutrients by using LIBS-based sensing.

  12. Moon4You: A combined Raman / LIBS instrument for lunar exploration

    NARCIS (Netherlands)

    Laan, E.C.; Ahlers, B.; van Westrenen, W.; Heiligers, J.; Wielders, A.

    2009-01-01

    Moon4You is a project led by the Dutch Organisation for Applied Scientific Research TNO, with partners from industry and universities in the Netherlands that aims to provide a combined Raman/LIBS instrument as scientific payload for lunar exploration missions. It is the first time that Raman

  13. Quantitative analysis of titanium concentration using calibration-free laser-induced breakdown spectroscopy (LIBS)

    Science.gov (United States)

    Zaitun; Prasetyo, S.; Suliyanti, M. M.; Isnaeni; Herbani, Y.

    2018-03-01

    Laser-induced breakdown spectroscopy (LIBS) can be used for quantitative and qualitative analysis. Calibration-free LIBS (CF-LIBS) is a method to quantitatively analyze concentration of elements in a sample in local thermodynamic equilibrium conditions without using available matrix-matched calibration. In this study, we apply CF-LIBS for quantitative analysis of Ti in TiO2 sample. TiO2 powder sample was mixed with polyvinyl alcohol and formed into pellets. An Nd:YAG pulsed laser at a wavelength of 1064 nm was focused onto the sample to generate plasma. The spectrum of plasma was recorded using spectrophotometer then compared to NIST spectral line to determine energy levels and other parameters. The value of plasma temperature obtained using Boltzmann plot is 8127.29 K and electron density from calculation is 2.49×1016 cm-3. Finally, the concentration of Ti in TiO2 sample from this study is 97% that is in proximity with the sample certificate.

  14. MEvoLib v1.0: the first molecular evolution library for Python.

    Science.gov (United States)

    Álvarez-Jarreta, Jorge; Ruiz-Pesini, Eduardo

    2016-10-28

    Molecular evolution studies involve many different hard computational problems solved, in most cases, with heuristic algorithms that provide a nearly optimal solution. Hence, diverse software tools exist for the different stages involved in a molecular evolution workflow. We present MEvoLib, the first molecular evolution library for Python, providing a framework to work with different tools and methods involved in the common tasks of molecular evolution workflows. In contrast with already existing bioinformatics libraries, MEvoLib is focused on the stages involved in molecular evolution studies, enclosing the set of tools with a common purpose in a single high-level interface with fast access to their frequent parameterizations. The gene clustering from partial or complete sequences has been improved with a new method that integrates accessible external information (e.g. GenBank's features data). Moreover, MEvoLib adjusts the fetching process from NCBI databases to optimize the download bandwidth usage. In addition, it has been implemented using parallelization techniques to cope with even large-case scenarios. MEvoLib is the first library for Python designed to facilitate molecular evolution researches both for expert and novel users. Its unique interface for each common task comprises several tools with their most used parameterizations. It has also included a method to take advantage of biological knowledge to improve the gene partition of sequence datasets. Additionally, its implementation incorporates parallelization techniques to enhance computational costs when handling very large input datasets.

  15. LibAnswers: Analyzing tickets (questions) to improve our library's virtual reference service(s)

    KAUST Repository

    Ramli, Rindra M.; Ba-Rayyan, Faten A.

    2017-01-01

    Analyze the questions received in LibAnswers (ticketing system) in order to improve the quality of our virtual reference services. Tickets that were received between June 2015 to April 2017 were analyzed and categorized. It was noted that most questions asked revolved around electronic resources issues as well as circulation/access issues.

  16. El vuelo zumbón de la libélula

    Directory of Open Access Journals (Sweden)

    Fernando González Cajiao

    1992-01-01

    Full Text Available Delírium titerensis. Tres obras de la Libélula Dorada: el dulce encanto de la isla Acracic, Los espíritus lúdicos y Ese chivo es puro cuento (ilustraciones de Carlos Rojas. Arango Editores, Bogotá, 1991, 129 págs.

  17. LibAnswers: Analyzing tickets (questions) to improve our library's virtual reference service(s)

    KAUST Repository

    Ramli, Rindra M.

    2017-05-01

    Analyze the questions received in LibAnswers (ticketing system) in order to improve the quality of our virtual reference services. Tickets that were received between June 2015 to April 2017 were analyzed and categorized. It was noted that most questions asked revolved around electronic resources issues as well as circulation/access issues.

  18. Sclerotinia sclerotiorum (Lib.) de Bary: biology and molecular traits of a cosmopolitan pathogen

    NARCIS (Netherlands)

    Bolton, M.D.; Thomma, B.P.H.J.; Nelson, B.D.

    2006-01-01

    Sclerotinia sclerotiorum (Lib.) de Bary is a necrotrophic fungal pathogen causing disease in a wide range of plants. This review summarizes current knowledge of mechanisms employed by the fungus to parasitize its host with emphasis on biology, physiology and molecular aspects of pathogenicity. In

  19. Development of an Automated LIBS Analytical Test System Integrated with Component Control and Spectrum Analysis Capabilities

    International Nuclear Information System (INIS)

    Ding Yu; Tian Di; Chen Feipeng; Chen Pengfei; Qiao Shujun; Yang Guang; Li Chunsheng

    2015-01-01

    The present paper proposes an automated Laser-Induced Breakdown Spectroscopy (LIBS) analytical test system, which consists of a LIBS measurement and control platform based on a modular design concept, and a LIBS qualitative spectrum analysis software and is developed in C#. The platform provides flexible interfacing and automated control; it is compatible with different manufacturer component models and is constructed in modularized form for easy expandability. During peak identification, a more robust peak identification method with improved stability in peak identification has been achieved by applying additional smoothing on the slope obtained by calculation before peak identification. For the purpose of element identification, an improved main lines analysis method, which detects all elements on the spectral peak to avoid omission of certain elements without strong spectral lines, is applied to element identification in the tested LIBS samples. This method also increases the identification speed. In this paper, actual applications have been carried out. According to tests, the analytical test system is compatible with components of various models made by different manufacturers. It can automatically control components to get experimental data and conduct filtering, peak identification and qualitative analysis, etc. on spectral data. (paper)

  20. Fire debris analysis for forensic fire investigation using laser induced breakdown spectroscopy (LIBS)

    Science.gov (United States)

    Choi, Soojin; Yoh, Jack J.

    2017-08-01

    The possibility verification of the first attempt to apply LIBS to arson investigation was performed. LIBS has capabilities for real time in-situ analysis and depth profiling. It can provide valuable information about the fire debris that are complementary to the classification of original sample components and combustion residues. In this study, fire debris was analyzed to determine the ignition source and existence of a fire accelerant using LIBS spectra and depth profiling analysis. Fire debris chemical composition and carbon layer thickness determines the possible ignition source while the carbon layer thickness of combusted samples represents the degree of sample carbonization. When a sample is combusted with fire accelerants, a thicker carbon layer is formed because the burning rate is increased. Therefore, depth profiling can confirm the existence of combustion accelerants, which is evidence of arson. Also investigation of fire debris by depth profiling is still possible when a fire is extinguished with water from fire hose. Such data analysis and in-situ detection of forensic signals via the LIBS may assist fire investigation at crime scenes.

  1. The extraction and determination of free lithium in Li-B alloys

    International Nuclear Information System (INIS)

    Kilroy, W.P.; Angres, I.

    1979-01-01

    Extraction of the lithium phase from lithium-rich Li-B alloys was achieved by reaction of the alloy with dry naphthalene dissolved in anhydrous tetrahydrofuran. The resulting radical anion was hydrolyzed and the lithium was determined by potentiometric titration from the moles of hydroxide formed. The composition of the Lisub(x)Bsub(y) residue was determined by difference. (Auth.)

  2. Usability Testing, User-Centered Design, and LibGuides Subject Guides: A Case Study

    Science.gov (United States)

    Sonsteby, Alec; DeJonghe, Jennifer

    2013-01-01

    Usability testing has become a routine way for many libraries to ensure that their Web presence is user-friendly and accessible. At the same time, popular subject guide creation systems, such as LibGuides, decentralize Web content creation and put authorship into the hands of librarians who may not be trained in user-centered design principles. At…

  3. Using LibGuides to enhance library services a LITA guide

    CERN Document Server

    Dobbs, Aaron W

    2013-01-01

    The easy-to-use tools in Springshare's LibGuides help you organize webpages, improve students' research experience and learning, and offer an online community of librarians sharing their work and ideas. Editors Dobbs, Sittler, and Cook have recruited expert contributors to address specific applications, creating a one-stop reference.

  4. La libéralisation comme source du dérèglement des transports ...

    African Journals Online (AJOL)

    Mots clés: Libéralisation - Transport public - Chronologie - Urbain - Organisation. English Title: Liberalization as a source of deregulation of public transport in Annaba city. English Abstract. Similarly at almost of the Algerian cities, after the dissolution of the Municipal Board RMCA, the city of Annaba doesn't escape from the ...

  5. Using Localized Survey Items to Augment Standardized Benchmarking Measures: A LibQUAL+[TM] Study

    Science.gov (United States)

    Thompson, Bruce; Cook, Colleen; Kyrillidou, Martha

    2006-01-01

    The LibQUAL+[TM] protocol solicits open-ended comments from users with regard to library service quality, gathers data on 22 core items, and, at the option of individual libraries, also garners ratings on five items drawn from a pool of more than 100 choices selected by libraries. In this article, the relationship of scores on these locally…

  6. libRoadRunner: a high performance SBML simulation and analysis library.

    Science.gov (United States)

    Somogyi, Endre T; Bouteiller, Jean-Marie; Glazier, James A; König, Matthias; Medley, J Kyle; Swat, Maciej H; Sauro, Herbert M

    2015-10-15

    This article presents libRoadRunner, an extensible, high-performance, cross-platform, open-source software library for the simulation and analysis of models expressed using Systems Biology Markup Language (SBML). SBML is the most widely used standard for representing dynamic networks, especially biochemical networks. libRoadRunner is fast enough to support large-scale problems such as tissue models, studies that require large numbers of repeated runs and interactive simulations. libRoadRunner is a self-contained library, able to run both as a component inside other tools via its C++ and C bindings, and interactively through its Python interface. Its Python Application Programming Interface (API) is similar to the APIs of MATLAB ( WWWMATHWORKSCOM: ) and SciPy ( HTTP//WWWSCIPYORG/: ), making it fast and easy to learn. libRoadRunner uses a custom Just-In-Time (JIT) compiler built on the widely used LLVM JIT compiler framework. It compiles SBML-specified models directly into native machine code for a variety of processors, making it appropriate for solving extremely large models or repeated runs. libRoadRunner is flexible, supporting the bulk of the SBML specification (except for delay and non-linear algebraic equations) including several SBML extensions (composition and distributions). It offers multiple deterministic and stochastic integrators, as well as tools for steady-state analysis, stability analysis and structural analysis of the stoichiometric matrix. libRoadRunner binary distributions are available for Mac OS X, Linux and Windows. The library is licensed under Apache License Version 2.0. libRoadRunner is also available for ARM-based computers such as the Raspberry Pi. http://www.libroadrunner.org provides online documentation, full build instructions, binaries and a git source repository. hsauro@u.washington.edu or somogyie@indiana.edu Supplementary data are available at Bioinformatics online. Published by Oxford University Press 2015. This work is written

  7. First genome size estimations for some eudicot families and genera

    Directory of Open Access Journals (Sweden)

    Garcia, S.

    2010-12-01

    Full Text Available Genome size diversity in angiosperms varies roughly 2400-fold, although approximately 45% of angiosperm families lack a single genome size estimation, and therefore, this range could be enlarged. To contribute completing family and genera representation, DNA C-Values are here provided for 19 species from 16 eudicot families, including first values for 6 families, 14 genera and 17 species. The sample of species studied is very diverse, including herbs, weeds, vines, shrubs and trees. Data are discussed regarding previous genome size estimates of closely related species or genera, if any, their chromosome number, growth form or invasive behaviour. The present research contributes approximately 1.5% new values for previously unreported angiosperm families, being the current coverage around 55% of angiosperm families, according to the Plant DNA C-Values Database.

    La diversidad del tamaño del genoma en angiospermas es muy amplia, siendo el valor más elevado aproximadamente unas 2400 veces superior al más pequeño. Sin embargo, cerca del 45% de las familias no presentan ni una sola estimación, por lo que el rango real podría ser ampliado. Para contribuir a completar la representación de familias y géneros de angiospermas, este estudio contribuye con valores C para 19 especies de 16 familias de eudicoticotiledóneas, incluyendo los primeros valores para 6 familias, 14 géneros y 17 especies. La muestra estudiada es muy diversa, e incluye hierbas, malezas, enredaderas, arbustos y árboles. Se discuten los resultados en función de estimaciones previas del tamaño del genoma de especies o géneros estrechamente relacionados, del número de cromosomas, la forma de crecimiento o el comportamiento invasor de las especies analizadas. El presente estudio contribuye aproximadamente en un 1,5% de nuevos valores para familias de angiospermas no estudiadas previamente, de las que actualmente existe información para el 55%, según la base de datos

  8. Review of the New World Tigava lace bug complex (Hemiptera: Heteroptera: Tingidae), with the description of two new genera and two new species and a key to genera

    Science.gov (United States)

    The lace bug (Tingidae) genera belonging to the New World Tigava complex are reviewed. The two new genera and new species Mexicotingis brailovskyi, from Mexico, and Paraceratotingis convergens, from Venezuela, are described. Diagnoses, descriptions, and digital color photographs of the new taxa, d...

  9. Remote-LIBS characterization of ITER-like plasma facing materials

    International Nuclear Information System (INIS)

    Almaviva, S.; Caneve, L.; Colao, F.; Fantoni, R.; Maddaluno, G.

    2012-01-01

    Graphical abstract: Display Omitted Highlights: ► Description of a LIBS set-up as remote diagnostics in new generation fusion machines. ► Identification of the atomic composition of samples simulating plasma facing components. ► Submicrometric resolution in depth profiling the elemental composition of the samples. ► Identification of elements present in traces or as impurities on the sample surface. ► Discussion on the applicability of the Calibration Free method for quantitative analysis. - Abstract: The occurrence of several plasma-wall interaction processes, eventually affecting the overall system performances, is expected in a working fusion device chamber. Monitoring the changes in the composition of the plasma facing component (PFC) surface layer, as a result of erosion and redeposition mechanisms, can provide useful information on the possible plasma pollution and fuel retention. To this aim, suitable diagnostic techniques able to perform depth profiling analysis of the superficial layers on the PFCs have been developed. Due to the constraints commonly found in fusion devices, the measuring apparatus must be non invasive, remote and sensitive to light elements. These requirements make LIBS (Laser Induced Breakdown Spectroscopy) an ideal candidate for on-line monitoring the walls of current and of next generation (as ITER) fusion devices. LIBS is a well established tool for qualitative, semi-quantitative and quantitative analysis of surfaces, with micro-destructive characteristics and some capabilities for stratigraphy. In this work, LIBS depth profiling capability has been verified for the determination of the composition of multilayer structures simulating plasma facing components covered with deposited impurity layers. A new experimental setup has been designed and realized in order to optimize the characteristics of a LIBS system working in vacuum conditions and remotely, two noticeable properties for an ITER-relevant diagnostics. A quantitative

  10. [Effect of Characteristic Variable Extraction on Accuracy of Cu in Navel Orange Peel by LIBS].

    Science.gov (United States)

    Li, Wen-bing; Yao, Ming-yin; Huang, Lin; Chen, Tian-bing; Zheng, Jian-hong; Fan, Shi-quan; Liu Mu-hua HE, Mu-hua; Lin, Jin-long; Ouyang, Jing-yi

    2015-07-01

    Heavy metals pollution in foodstuffs is more and more serious. It is impossible to satisfy the modern agricultural development by conventional chemical analysis. Laser induced breakdown spectroscopy (LIBS) is an emerging technology with the characteristic of rapid and nondestructive detection. But LIBS' s repeatability, sensitivity and accuracy has much room to improve. In this work, heavy metal Cu in Gannan Navel Orange which is the Jiangxi specialty fruit will be predicted by LIBS. Firstly, the navel orange samples were contaminated in our lab. The spectra of samples were collected by irradiating the peel by optimized LIBS parameters. The laser energy was set as 20 mJ, delay time of Spectral Data Gathering was set as 1.2 micros, the integration time of Spectral data gathering was set as 2 ms. The real concentration in samples was obtained by AAS (atom absorption spectroscopy). The characteristic variables Cu I 324.7 and Cu I 327.4 were extracted. And the calibration model was constructed between LIBS spectra and real concentration about Cu. The results show that relative error of the predicted concentrations of three relational model were 7.01% or less, reached a minimum of 0.02%, 0.01% and 0.02% respectively. The average relative errors were 2.33%, 3.10% and 26.3%. Tests showed that different characteristic variables decided different accuracy. It is very important to choose suitable characteristic variable. At the same time, this work is helpful to explore the distribution of heavy metals between pulp and peel.

  11. [Determination of Cu in Shell of Preserved Egg by LIBS Coupled with PLS].

    Science.gov (United States)

    Hu, Hui-qin; Xu, Xue-hong; Liu, Mu-hua; Tu, Jian-ping; Huang, Le; Huang, Lin; Yao, Ming-yin; Chen, Tian-bing; Yang, Ping

    2015-12-01

    In this work, the content of copper in the shell of preserved eggs were determined directly by Laser induced breakdown spectroscopy (LIBS), and the characteristics lines of Cu was obtained. The samples of eggshell were pretreated by acid wet digestion, and the real content of Cu was obtained by atomic absorption spectrophotometer (AAS). Due to the test precision and accuracy of LIBS was influenced by a serious of factors, for example, the complex matrix effect of sample, the enviro nment noise, the system noise of the instrument, the stability of laser energy and so on. And the conventional unvariate linear calibration curve between LIBS intensity and content of element of sample, such as by use of Schiebe G-Lomakin equation, can not meet the requirement of quantitative analysis. In account of that, a kind of multivariate calibration method is needed. In this work, the data of LIBS spectra were processed by partial least squares (PLS), the precision and accuracy of PLS model were compared by different smoothing treatment and five pretreatment methods. The result showed that the correlation coefficient and the accuracy of the PLS model were improved, and the root mean square error and the average relative error were reduced effectively by 11 point smoothing with Multiplicative scatter correction (MSC) pretreatment. The results of the study show that, heavy metal Cu in preserved egg shells can be direct detected accurately by laser induced breakdown spectroscopy, and the next step batch tests will been conducted to find out the relationship of heavy metal Cu content in the preserved egg between the eggshell, egg white and egg yolk. And the goal of the contents of heavy metals in the egg white, egg yolk can be knew through determinate the eggshell by the LIBS can be achieved, to provide new method for rapid non-destructive testing technology for quality and satety of agricultural products.

  12. LibKiSAO: a Java library for Querying KiSAO.

    Science.gov (United States)

    Zhukova, Anna; Adams, Richard; Laibe, Camille; Le Novère, Nicolas

    2012-09-24

    The Kinetic Simulation Algorithm Ontology (KiSAO) supplies information about existing algorithms available for the simulation of Systems Biology models, their characteristics, parameters and inter-relationships. KiSAO enables the unambiguous identification of algorithms from simulation descriptions. Information about analogous methods having similar characteristics and about algorithm parameters incorporated into KiSAO is desirable for simulation tools. To retrieve this information programmatically an application programming interface (API) for KiSAO is needed. We developed libKiSAO, a Java library to enable querying of the KiSA Ontology. It implements methods to retrieve information about simulation algorithms stored in KiSAO, their characteristics and parameters, and methods to query the algorithm hierarchy and search for similar algorithms providing comparable results for the same simulation set-up. Using libKiSAO, simulation tools can make logical inferences based on this knowledge and choose the most appropriate algorithm to perform a simulation. LibKiSAO also enables simulation tools to handle a wider range of simulation descriptions by determining which of the available methods are similar and can be used instead of the one indicated in the simulation description if that one is not implemented. LibKiSAO enables Java applications to easily access information about simulation algorithms, their characteristics and parameters stored in the OWL-encoded Kinetic Simulation Algorithm Ontology. LibKiSAO can be used by simulation description editors and simulation tools to improve reproducibility of computational simulation tasks and facilitate model re-use.

  13. Phytogeographical analysis of seed plant genera in China.

    Science.gov (United States)

    Qian, Hong; Wang, Silong; He, Jin-Sheng; Zhang, Junli; Wang, Lisong; Wang, Xianli; Guo, Ke

    2006-11-01

    A central goal of biogeography and ecology is to uncover and understand distributional patterns of organisms. China has long been a focus of attention because of its rich biota, especially with respect to plants. Using 290 floras from across China, this paper quantitatively characterizes the composition of floristic elements at multiple scales (i.e. national, provincial and local), and explores the extent to which climatic and geographical factors associated with each flora can jointly and independently explain the variation in floristic elements in local floras. A study was made of 261 local floras, 28 province-level floras and one national-level flora across China. Genera of seed plants in each flora were assigned to 14 floristic elements according to their worldwide geographical distributions. The composition of floristic elements was related to climatic and geographical factors. Variations in percentages of cosmopolitan, tropical and temperate genera among local floras tend to be greater at higher latitudes than at lower latitudes. Latitude is strongly correlated with the proportions of 13 of the 14 floristic elements. Correlations of the proportions of floristic elements with longitude are much weaker than those with latitude. Climate represented by the first principal component of a principal component analysis was strongly correlated with the proportions of floristic elements in local floras (|r| = 0.75 +/- 0.18). Geographical coordinates independently explained about four times as much variation in floristic elements as did climate. Further research is necessary to examine the roles of water-energy dynamics, geology, soils, biotic interactions, and historical factors such as land connections between continents in the past and at present in creating observed floristic patterns.

  14. In-vitro analysis of early calcification in aortic valvular interstitial cells using Laser-Induced Breakdown Spectroscopy (LIBS).

    Science.gov (United States)

    Davari, Seyyed Ali; Masjedi, Shirin; Ferdous, Zannatul; Mukherjee, Dibyendu

    2018-01-01

    Calcific aortic valve disease (CAVD) is a major cardiovascular disorder caused by osteogenic differentiation of valvular interstitial cells (VICs) within aortic valves. Conventional methods like colorimetric assays and histology fail to detect small calcium depositions during in-vitro VIC cultures. Laser-induced breakdown spectroscopy (LIBS) is a robust analytical tool used for inorganic materials characterizations, but relatively new to biomedical applications. We employ LIBS, for the first time, for quantitative in-vitro detection of calcium depositions in VICs at various osteogenic differentiation stages. VICs isolated from porcine aortic valves were cultured in osteogenic media over various days. Colorimetric calcium assays based on arsenazo dye and Von Kossa staining measured the calcium depositions within VICs. Simultaneously, LIBS signatures for Ca I (422.67 nm) atomic emission lines were collected for estimating calcium depositions in lyophilized VIC samples. Our results indicate excellent linear correlation between the calcium assay and our LIBS measurements. Furthermore, unlike the assay results, the LIBS results could resolve calcium signals from cell samples with as early as 2 days of osteogenic culture. Quantitatively, the LIBS measurements establish the limit of detection for calcium content in VICs to be ∼0.17±0.04 μg which indicates a 5-fold improvement over calcium assay. Picture: Quantitative LIBS enables in-vitro analysis for early stage detection of calcium deposition within aortic valvular interstitial cells (VICs). © 2017 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

  15. A brief history of laser-induced breakdown spectroscopy: From the concept of atoms to LIBS 2012

    International Nuclear Information System (INIS)

    Radziemski, Leon; Cremers, David

    2013-01-01

    LIBS did not appear de novo in 1962, but was built upon accomplishments of the past. These started with very old concepts of indivisible units (atomos), chemical and physical experiments and theoretical advances that took place in the late 19th and early 20th centuries, the development of the laser, the discovery of gas breakdown, and the realization of the application to spectrochemistry. We sketch the historical developments and focus as well on the advances in LIBS methodology and instrumentation over the past 50 years, culminating with a synopsis of the LIBS 2012 Conference in Luxor, Egypt

  16. A brief history of laser-induced breakdown spectroscopy: From the concept of atoms to LIBS 2012

    Energy Technology Data Exchange (ETDEWEB)

    Radziemski, Leon, E-mail: ljrbwr@comcast.net [Tucson, AZ (United States); Cremers, David [Applied Research Associates Inc., Albuquerque, NM (United States)

    2013-09-01

    LIBS did not appear de novo in 1962, but was built upon accomplishments of the past. These started with very old concepts of indivisible units (atomos), chemical and physical experiments and theoretical advances that took place in the late 19th and early 20th centuries, the development of the laser, the discovery of gas breakdown, and the realization of the application to spectrochemistry. We sketch the historical developments and focus as well on the advances in LIBS methodology and instrumentation over the past 50 years, culminating with a synopsis of the LIBS 2012 Conference in Luxor, Egypt.

  17. A Simple Device for Lens-to-Sample Distance Adjustment in Laser-Induced Breakdown Spectroscopy (LIBS).

    Science.gov (United States)

    Cortez, Juliana; Farias Filho, Benedito B; Fontes, Laiane M; Pasquini, Celio; Raimundo, Ivo M; Pimentel, Maria Fernanda; de Souza Lins Borba, Flávia

    2017-04-01

    A simple device based on two commercial laser pointers is described to assist in the analysis of samples that present uneven surfaces and/or irregular shapes using laser-induced breakdown spectroscopy (LIBS). The device allows for easy positioning of the sample surface at a reproducible distance from the focusing lens that conveys the laser pulse to generate the micro-plasma in a LIBS system, with reproducibility better than ±0.2 mm. In this way, fluctuations in the fluence (J cm -2 ) are minimized and the LIBS analytical signals can be obtained with a better precision even when samples with irregular surfaces are probed.

  18. Emission Characteristics of Laser-Induced Plasma Using Collinear Long and Short Dual-Pulse Laser-Induced Breakdown Spectroscopy (LIBS).

    Science.gov (United States)

    Wang, Zhenzhen; Deguchi, Yoshihiro; Liu, Renwei; Ikutomo, Akihiro; Zhang, Zhenzhen; Chong, Daotong; Yan, Junjie; Liu, Jiping; Shiou, Fang-Jung

    2017-09-01

    Collinear long and short dual-pulse laser-induced breakdown spectroscopy (DP-LIBS) was employed to clarify the emission characteristics from laser-induced plasma. The plasma was sustained and became stable by the long pulse-width laser with the pulse width of 60 μs under free running (FR) conditions as an external energy source. Comparing the measurement results of stainless steel in air using single-pulse LIBS (SP-LIBS) and DP-LIBS, the emission intensity was markedly enhanced using DP-LIBS. The temperature of plasma induced by DP-LIBS was maintained at a higher temperature under different gate delay time and short pulse-width laser power conditions compared with those measured using short SP-LIBS. Moreover, the variation rates of plasma temperatures measured using DP-LIBS were also lower. The superior detection ability was verified by the measurement of aluminum sample in water. The spectra were clearly detected using DP-LIBS, whereas it cannot be identified using SP-LIBS of short and long pulse widths. The effects of gate delay time and short pulse-width laser power were also discussed. These results demonstrate the feasibility and enhanced detection ability of the proposed collinear long and short DP-LIBS method.

  19. Entwicklung der Reglementierung von 10 MEM-Berufen im Kontext von Bildungsreformen und dem Wandel in der Arbeitswelt: Eine Kurzstudie im Auftrag von LIBS: Eine Kurzstudie im Auftrag von LIBS Industrielle Berufslehren Schweiz, Baden

    OpenAIRE

    Egg, Maria Esther; Renold, Ursula

    2015-01-01

    Im Auftrag der LIBS Industrielle Berufslehren Schweiz, hat die KOF die Entwicklung von 10 MEM1-Berufsbildern seit dem ersten Berufsbildungsgesetz dargestellt und diese eingebettet in eine kurze Zusammenfassung der wichtigsten Etappenschritte des Schweizer Berufsbildungssystems.

  20. The genera of Chrysomelinae (Coleoptera: Chrysomelidae in Costa Rica

    Directory of Open Access Journals (Sweden)

    R. Wills Flowers

    2004-03-01

    Full Text Available Keys in Spanish and English are given for the genera of Chrysomelinae known from Costa Rica. For each genus, a list of species compiled from collections in the University of Costa Rica, the National Biodiversity Institute, and the entomological literature is presented. The genus Planagetes Chevrolat 1843 is recorded for the first time from Central America, and the genus Leptinotarsa Stål 1858 is synonymized with Stilodes Chevrolat 1843Se presenta claves en español y inglés para los géneros de Chrysomelinae conocidas de Costa Rica. Para cada género, se presenta una lista de especies compiladas de las colecciones de la Universidad de Costa Rica, el Instituto Nacional de Biodiversidad, y la literatura entomológica. El género Planagetes Chevrolat 1843 está registrado por primera vez de América Central, y el género Leptinotarsa Stål 1858 está sinonomizado con Stilodes Chevrolat 1843

  1. Distinguishing centrarchid genera by use of lateral line scales

    Science.gov (United States)

    Roberts, N.M.; Rabeni, C.F.; Stanovick, J.S.

    2007-01-01

    Predator-prey relations involving fishes are often evaluated using scales remaining in gut contents or feces. While several reliable keys help identify North American freshwater fish scales to the family level, none attempt to separate the family Centrarchidae to the genus level. Centrarchidae is of particular concern in the midwestern United States because it contains several popular sport fishes, such as smallmouth bass Micropterus dolomieu, largemouth bass M. salmoides, and rock bass Ambloplites rupestris, as well as less-sought-after species of sunfishes Lepomis spp. and crappies Pomoxis spp. Differentiating sport fish from non-sport fish has important management implications. Morphological characteristics of lateral line scales (n = 1,581) from known centrarchid fishes were analyzed. The variability of measurements within and between genera was examined to select variables that were the most useful in further classifying unknown centrarchid scales. A linear discriminant analysis model was developed using 10 variables. Based on this model, 84.4% of Ambloplites scales, 81.2% of Lepomis scales, and 86.6% of Micropterus scales were classified correctly using a jackknife procedure. ?? Copyright by the American Fisheries Society 2007.

  2. Habitat preference of Zoantharia genera depends on host sponge morphology

    Directory of Open Access Journals (Sweden)

    Alberto Acosta

    2010-08-01

    Full Text Available Studies about sponge-zoanthid symbioses have been focused on understanding the specificity of the association, rather thantesting what are the characteristics that make the host suitable to be colonized. For the first time it is investigated whether the ZoanthariaParazoanthus and Epizoanthus preference is related to the host sponge morphology (shape and mechanical resistance. Materials andmethods. Sponges were categorized according to their shape and mechanical resistance. The presence/absence of zoanthids was recordedin 1,068 sponges at San Andres Island, and their habitat preference was evaluated using indices and confidence intervals. Results. 85Parazoanthus colonies (78% of the total associations and 24 Epizoanthus colonies (22% were associated to sponges (10.2% in total.Parazoanthus uses branched and compressible sponges although prefers encrusting and fragile sponges, while Epizoanthus showes theopposite pattern, it can inhabit encrusting and fragile sponges but prefers branched and compressible sponges. Conclusion. These resultsindicated that sponge morphology is an important trait in zoanthid habitat selection. On the other hand, the similarity in the habitat used byzoanthids suggests the possibility of inter-generic competition if common resources are limited in time and space, while the differentialhabitat preference allows the competitive coexistence of both genera.

  3. Optimalizace experimentálních parametrů v sestavě dvoupulzní LIBS

    OpenAIRE

    Roščák, Michal

    2010-01-01

    V diplomovej práci je opísaná metóda spektroskopie laserom indukovanej plazmy (LIBS) ako aj možnosť zníženia detekčných limitov použitím metódy dvojpulznej LIBS (DP-LIBS). Práca taktiež pojednáva o vlastnostiach laserom indukovanej plazmy (LIP). Obsahuje opis DP-LIBS aparatúry laboratória laserovej spektroskopie Fakulty strojního inženýrství, Vysoké učení technické v Brně, ako aj postup optimalizácie jej parametrov. Optimalizácia bola vykonaná pre detekciu chrómu v oceli s ohľadom na detekčné...

  4. Development of laser-based technology for the routine first wall diagnostic on the tokamak EAST: LIBS and LIAS

    Science.gov (United States)

    Hu, Z.; Gierse, N.; Li, C.; Liu, P.; Zhao, D.; Sun, L.; Oelmann, J.; Nicolai, D.; Wu, D.; Wu, J.; Mao, H.; Ding, F.; Brezinsek, S.; Liang, Y.; Ding, H.; Luo, G.; Linsmeier, C.; EAST Team

    2017-12-01

    A laser based method combined with spectroscopy, such as laser-induced breakdown spectroscopy (LIBS) and laser-induced ablation spectroscopy (LIAS), is a promising technology for plasma-wall interaction studies. In this work, we report the development of in situ laser-based diagnostics (LIBS and LIAS) for the assessment of static and dynamic fuel retention on the first wall without removing the tiles between and during plasma discharges in the Experimental Advanced Superconducting Tokamak (EAST). The fuel retention on the first wall was measured after different wall conditioning methods and daily plasma discharges by in situ LIBS. The result indicates that the LIBS can be a useful tool to predict the wall condition in EAST. With the successful commissioning of a refined timing system for LIAS, an in situ approach to investigate fuel retention is proposed.

  5. Application of Handheld Laser-Induced Breakdown Spectroscopy (LIBS) to Geochemical Analysis.

    Science.gov (United States)

    Connors, Brendan; Somers, Andrew; Day, David

    2016-05-01

    While laser-induced breakdown spectroscopy (LIBS) has been in use for decades, only within the last two years has technology progressed to the point of enabling true handheld, self-contained instruments. Several instruments are now commercially available with a range of capabilities and features. In this paper, the SciAps Z-500 handheld LIBS instrument functionality and sub-systems are reviewed. Several assayed geochemical sample sets, including igneous rocks and soils, are investigated. Calibration data are presented for multiple elements of interest along with examples of elemental mapping in heterogeneous samples. Sample preparation and the data collection method from multiple locations and data analysis are discussed. © The Author(s) 2016.

  6. Rapid analysis of pharmaceutical drugs using LIBS coupled with multivariate analysis.

    Science.gov (United States)

    Tiwari, P K; Awasthi, S; Kumar, R; Anand, R K; Rai, P K; Rai, A K

    2018-02-01

    Type 2 diabetes drug tablets containing voglibose having dose strengths of 0.2 and 0.3 mg of various brands have been examined, using laser-induced breakdown spectroscopy (LIBS) technique. The statistical methods such as the principal component analysis (PCA) and the partial least square regression analysis (PLSR) have been employed on LIBS spectral data for classifying and developing the calibration models of drug samples. We have developed the ratio-based calibration model applying PLSR in which relative spectral intensity ratios H/C, H/N and O/N are used. Further, the developed model has been employed to predict the relative concentration of element in unknown drug samples. The experiment has been performed in air and argon atmosphere, respectively, and the obtained results have been compared. The present model provides rapid spectroscopic method for drug analysis with high statistical significance for online control and measurement process in a wide variety of pharmaceutical industrial applications.

  7. ANALISIS UNSUR Ag PADA SAMPEL CAIR DENGAN LASER INDUCED BREAKDOWN SPECTROSCOPY (LIBS

    Directory of Open Access Journals (Sweden)

    Sinaga Natalia Declarossy

    2014-02-01

    Full Text Available It has been done research on the analysis of Ag element in the liquid electrolyte with Laser Induced Breakdown Spectroscopy (LIBS through electrolysis method. Observations conducted by LIBS using Nd-YAG laser (1064nm, 7ns. Prior to analyze, first looking for the optimum conditions of experiments had been done. The results showed that the optimum laser energy to the characterization of the elements Ag was 100 mJ and optimum conditions of electric current and time deposition on electrolysis process were 4.93 mA and 10 minutes, respectively. These conditions, next, for the application of quantitative analysis of Ag solution that started from concentration 300 ppm to the lowest concentration and limit of detection obtained 1 ppm.

  8. The Doryctinae (Braconidae) of Costa Rica: genera and species of the tribe Heterospilini

    OpenAIRE

    Marsh, Paul; Wild, Alexander; Whitfield, James

    2013-01-01

    Abstract A comprehensive taxonomic study is presented for the four genera and 286 species of the doryctine tribe Heterospilini occurring in Costa Rica. The tribe is represented almost entirely by the 280 species of the genus Heterospilus Haliday. Keys for identification of the genera and species are provided and the genera and species are described and illustrated. An interactive key to the species of Heterospilus also was prepared using Lucid Builder. The following new genus and species are ...

  9. A key to the Mexican and Central America Genera of Anthonomini (Curculionidae, Curculioninae)

    Science.gov (United States)

    Hernández, Macotulio Soto; Jones, Robert W.; Castillo, Pedro Reyes

    2013-01-01

    Abstract Presently the only keys available for identification of genera of Anthonomini are limited to those of the United States of America and Canada. A dichotomous key is presented to identify all genera of Mexican and Central American Anthonomini. Previous keys do not include the genera Achia, Botanebius, Loncophorus, Loncophorellus and Melexerus. A brief synopsis is given for each genus and photographs of representative species are included. PMID:23717181

  10. Libéralisation commerciale et pauvreté en Afrique | CRDI - Centre ...

    International Development Research Centre (IDRC) Digital Library (Canada)

    25 mai 2010 ... Bien que le principal argument des partisans de la libéralisation commerciale soit les gains de bien-être, à l'échange, ceux-ci reconnaissent qu'il y a des gagnants et des perdants. Face à ce constat, la problématique de la répartition des gains de l'échange dans les pays en développement, où les ...

  11. Qualitative evaluation of maternal milk and commercial infant formulas via LIBS.

    Science.gov (United States)

    Abdel-Salam, Z; Al Sharnoubi, J; Harith, M A

    2013-10-15

    This study focuses on the use of laser-induced breakdown spectroscopy (LIBS) for the evaluation of the nutrients in maternal milk and some commercially available infant formulas. The results of such evaluation are vital for adequate and healthy feeding for babies during lactation period. Laser-induced breakdown spectroscopy offers special advantages in comparison to the other conventional analytical techniques. Specifically, LIBS is a straightforward technique that can be used in situ to provide qualitative analytical information in few minutes for the samples under investigation without preparation processes. The samples studied in the current work were maternal milk samples collected during the first 3 months of lactation (not colostrum milk) and samples from six different types of commercially available infant formulas. The samples' elemental composition has been compared with respect to the relative abundance of the elements of nutrition importance, namely Mg, Ca, Na, and Fe using their spectral emission lines in the relevant LIBS spectra. In addition, CN and C2 molecular emission bands in the same spectra have been studied as indicators of proteins content in the samples. The obtained analytical results demonstrate the higher elemental contents of the maternal milk compared with the commercial formulas samples. Similar results have been obtained as for the proteins content. It has been also shown that calcium and proteins have similar relative concentration trends in the studied samples. This work demonstrates the feasibility of adopting LIBS as a fast, safe, less costly technique evaluating qualitatively the nutrients content of both maternal and commercial milk samples. Copyright © 2013 Elsevier B.V. All rights reserved.

  12. An exploratory study of the potential of LIBS for visualizing gunshot residue patterns.

    Science.gov (United States)

    López-López, María; Alvarez-Llamas, César; Pisonero, Jorge; García-Ruiz, Carmen; Bordel, Nerea

    2017-04-01

    The study of gunshot residue (GSR) patterns can assist in the reconstruction of shooting incidences. Currently, there is a real need of methods capable of furnishing simultaneous elemental analysis with higher specificity for the GSR pattern visualization. Laser-Induced Breakdown Spectroscopy (LIBS) provides a multi-elemental analysis of the sample, requiring very small amounts of material and no sample preparation. Due to these advantages, this study aims at exploring the potential of LIBS imaging for the visualization of GSR patterns. After the spectral characterization of individual GSR particles, the distribution of Pb, Sb and Ba over clothing targets, shot from different distances, were measured in laser raster mode. In particular, an array of spots evenly spaced at 800μm, using a stage displacement velocity of 4mm/s and a laser frequency of 5Hz was employed (e.g. an area of 130×165mm 2 was measured in less than 3h). A LIBS set-up based on the simultaneous use of two spectrographs with iCCD cameras and a motorized stage was used. This set-up allows obtaining information from two different wavelength regions (258-289 and 446-463nm) from the same laser induced plasma, enabling the simultaneous detection of the three characteristic elements (Pb, Sb, and Ba) of GSR particles from conventional ammunitions. The ability to visualize the 2D distribution GSR pattern by LIBS may have an important application in the forensic field, especially for the ballistics area. Copyright © 2017 Elsevier B.V. All rights reserved.

  13. EggLib: processing, analysis and simulation tools for population genetics and genomics

    Directory of Open Access Journals (Sweden)

    De Mita Stéphane

    2012-04-01

    Full Text Available Abstract Background With the considerable growth of available nucleotide sequence data over the last decade, integrated and flexible analytical tools have become a necessity. In particular, in the field of population genetics, there is a strong need for automated and reliable procedures to conduct repeatable and rapid polymorphism analyses, coalescent simulations, data manipulation and estimation of demographic parameters under a variety of scenarios. Results In this context, we present EggLib (Evolutionary Genetics and Genomics Library, a flexible and powerful C++/Python software package providing efficient and easy to use computational tools for sequence data management and extensive population genetic analyses on nucleotide sequence data. EggLib is a multifaceted project involving several integrated modules: an underlying computationally efficient C++ library (which can be used independently in pure C++ applications; two C++ programs; a Python package providing, among other features, a high level Python interface to the C++ library; and the egglib script which provides direct access to pre-programmed Python applications. Conclusions EggLib has been designed aiming to be both efficient and easy to use. A wide array of methods are implemented, including file format conversion, sequence alignment edition, coalescent simulations, neutrality tests and estimation of demographic parameters by Approximate Bayesian Computation (ABC. Classes implementing different demographic scenarios for ABC analyses can easily be developed by the user and included to the package. EggLib source code is distributed freely under the GNU General Public License (GPL from its website http://egglib.sourceforge.net/ where a full documentation and a manual can also be found and downloaded.

  14. Sausage instability of Z-discharged plasma channel in LIB-fusion device

    International Nuclear Information System (INIS)

    Murakami, H.; Kawata, S.; Niu, K.

    1982-07-01

    Current-carring plasma channels have been proposed for transporting intense ion beams from diodes to a target in a LIB-fusion device. In this paper, the growth rate of the most dangerous surface mode, that is, axisymmetric sausage instability is examined for the plasma channel. The growth rate is shown to be smaller than that of the plasma channel with no fluid motion in a sharp boundary. It is concluded that the stable plasma channel can be formed. (author)

  15. Portable LIBS system for determining the composition of multilayer structures on objects of cultural value

    International Nuclear Information System (INIS)

    Moreira Osorio, Lesther; Ponce Cabrera, Luis V; Arronte Garcia, Miguel A; Flores Reyes, Teresa; Ravelo, Ivette

    2011-01-01

    This study presents the use of a portable Laser Induced Breakdown Spectroscopy (LIBS) prototype for determining the elemental composition of a metal jug. The system includes emission from a multiuse Q-switched Nd:YAG laser. By sampling at different points, the surface composition is determined. Furthermore, the presence of two layers of Pb and Cu and their thicknesses are determined through in-depth analysis.

  16. La libéralisation comme source du dérèglement des transports ...

    African Journals Online (AJOL)

    proposant un phasage chronologique relatif à son évolution, tout en mettant la lumière sur ses effets les plus manifestes à l'échelle nationale et surtout sur le plan urbain par rapport au périmètre de transport de la ville d'Annaba, ceci à travers ses différents volets organisationnels et fonctionnels. Mots clés: Libéralisation ...

  17. arriba-lib: evaluation of an electronic library of decision aids in primary care physicians

    Directory of Open Access Journals (Sweden)

    Hirsch Oliver

    2012-06-01

    Full Text Available Abstract Background The successful implementation of decision aids in clinical practice initially depends on how clinicians perceive them. Relatively little is known about the acceptance of decision aids by physicians and factors influencing the implementation of decision aids from their point of view. Our electronic library of decision aids (arriba-lib is to be used within the encounter and has a modular structure containing evidence-based decision aids for the following topics: cardiovascular prevention, atrial fibrillation, coronary heart disease, oral antidiabetics, conventional and intensified insulin therapy, and unipolar depression. The aim of our study was to evaluate the acceptance of arriba-lib in primary care physicians. Methods We conducted an evaluation study in which 29 primary care physicians included 192 patients. The physician questionnaire contained information on which module was used, how extensive steps of the shared decision making process were discussed, who made the decision, and a subjective appraisal of consultation length. We used generalised estimation equations to measure associations within patient variables and traditional crosstab analyses. Results Only a minority of consultations (8.9% was considered to be unacceptably extended. In 90.6% of consultations, physicians said that a decision could be made. A shared decision was perceived by physicians in 57.1% of consultations. Physicians said that a decision was more likely to be made when therapeutic options were discussed “detailed”. Prior experience with decision aids was not a critical variable for implementation within our sample of primary care physicians. Conclusions Our study showed that it might be feasible to apply our electronic library of decision aids (arriba-lib in the primary care context. Evidence-based decision aids offer support for physicians in the management of medical information. Future studies should monitor the long-term adoption of

  18. [Research on fast classification based on LIBS technology and principle component analyses].

    Science.gov (United States)

    Yu, Qi; Ma, Xiao-Hong; Wang, Rui; Zhao, Hua-Feng

    2014-11-01

    Laser-induced breakdown spectroscopy (LIBS) and the principle component analysis (PCA) were combined to study aluminum alloy classification in the present article. Classification experiments were done on thirteen different kinds of standard samples of aluminum alloy which belong to 4 different types, and the results suggested that the LIBS-PCA method can be used to aluminum alloy fast classification. PCA was used to analyze the spectrum data from LIBS experiments, three principle components were figured out that contribute the most, the principle component scores of the spectrums were calculated, and the scores of the spectrums data in three-dimensional coordinates were plotted. It was found that the spectrum sample points show clear convergence phenomenon according to the type of aluminum alloy they belong to. This result ensured the three principle components and the preliminary aluminum alloy type zoning. In order to verify its accuracy, 20 different aluminum alloy samples were used to do the same experiments to verify the aluminum alloy type zoning. The experimental result showed that the spectrum sample points all located in their corresponding area of the aluminum alloy type, and this proved the correctness of the earlier aluminum alloy standard sample type zoning method. Based on this, the identification of unknown type of aluminum alloy can be done. All the experimental results showed that the accuracy of principle component analyses method based on laser-induced breakdown spectroscopy is more than 97.14%, and it can classify the different type effectively. Compared to commonly used chemical methods, laser-induced breakdown spectroscopy can do the detection of the sample in situ and fast with little sample preparation, therefore, using the method of the combination of LIBS and PCA in the areas such as quality testing and on-line industrial controlling can save a lot of time and cost, and improve the efficiency of detection greatly.

  19. Snakes or Ladders? Evaluating a LibGuides pilot at University College Dublin Library

    OpenAIRE

    Dalton, Michelle; Pan, Rosalind

    2014-01-01

    Online subject guides are commonly used by libraries to provide information support to students. LibGuides (a cloud-based commercial product launched in 2007) represent one of the latest incarnations of the traditional subject guide or portal, and are widely used across American academic libraries. In Ireland however, library subject guides of entirely local design and hosted on a local web server still dominate. This paper outlines the project management process involved in implementing a Li...

  20. Correlation between Fe–V–C alloys surface hardness and plasma temperature via LIBS technique

    Energy Technology Data Exchange (ETDEWEB)

    Messaoud Aberkane, S., E-mail: smessaoud@cdta.dz [Centre de Développement des Technologies Avancées, Baba Hassen, Alger (Algeria); Bendib, A. [Université des Sciences et de Technologie Houari Boumediene, Bab-Ezzouar, Alger (Algeria); Yahiaoui, K.; Boudjemai, S.; Abdelli-Messaci, S.; Kerdja, T. [Centre de Développement des Technologies Avancées, Baba Hassen, Alger (Algeria); Amara, S.E. [Université des Sciences et de Technologie Houari Boumediene, Bab-Ezzouar, Alger (Algeria); Harith, M.A. [National Institute of Laser Enhanced Science, Cairo University (Egypt)

    2014-05-01

    Highlights: • New application of LIBS in industry. • Hardness of metallic alloys estimation using LIBS calibration curves. • Linear correlation between the plasma temperature and the hardness of metallic alloys. • The shock wave is fast when the material is hard. - Abstract: Surface hardness is a very important characteristic of metals. Its monitoring plays a key role in industry. In the present paper, using laser induced breakdown spectroscopy (LIBS), Fe–V{sub 18%}–C{sub 1%} alloys with different heat treatments have been used for making the correlation between surface hardness and laser-induced plasma temperatures. All investigated samples were characterized by the same ferrite phase with different Vickers surface hardnesses. The differences in hardness values were attributed to the crystallite size changes. A linear relationship has been obtained between the Vickers surface hardness and the laser induced plasma temperature. For comparison the relation between surface hardness and the ratio of the vanadium ionic to atomic spectral lines intensities (VII/VI) provided good linear results too. However, adopting the proposed approach of using the plasma temperature, instead, is more reliable in view of the difficulties that could be encountered in choosing the proper ionic and atomic spectral lines. To validate this approach we have investigated the shock wave speed induced by laser interaction with the used samples. It was found that harder is the material faster is the shock wave. The determination of the surface hardness via measuring T{sub e} shows the feasibility of using LIBS as an easy and reliable method for in situ industrial application for production control.

  1. Laser-Induced Breakdown Spectroscopy (LIBS for Monitoring the Formation of Hydroxyapatite Porous Layers

    Directory of Open Access Journals (Sweden)

    Daniel Sola

    2017-12-01

    Full Text Available Laser-induced breakdown spectroscopy (LIBS is applied to characterize the formation of porous hydroxyapatite layers on the surface of 0.8CaSiO3-0.2Ca3(PO42 biocompatible eutectic glass immersed in simulated body fluid (SBF. Compositional and structural characterization analyses were also conducted by field emission scanning electron microscopy (FESEM, energy dispersive X-ray spectroscopy (EDX, and micro-Raman spectroscopy.

  2. Laser-Induced Breakdown Spectroscopy (LIBS) for Monitoring the Formation of Hydroxyapatite Porous Layers

    OpenAIRE

    Sola, Daniel; Paulés, Daniel; Grima, Lorena; Anzano, Jesús

    2017-01-01

    Laser-induced breakdown spectroscopy (LIBS) is applied to characterize the formation of porous hydroxyapatite layers on the surface of 0.8CaSiO3-0.2Ca3(PO4)2 biocompatible eutectic glass immersed in simulated body fluid (SBF). Compositional and structural characterization analyses were also conducted by field emission scanning electron microscopy (FESEM), energy dispersive X-ray spectroscopy (EDX), and micro-Raman spectroscopy.

  3. Libéralisation du commerce des biens et services TIC : enjeux et ...

    International Development Research Centre (IDRC) Digital Library (Canada)

    Libéralisation du commerce des biens et services TIC : enjeux et implications pour la mise en oeuvre de politiques publiques en Afrique de l'Ouest. En Afrique de l'Ouest, les entreprises du secteur privé des technologies d'information et de la communication (TIC) ont démontré leur capacité à créer des emplois et à stimuler ...

  4. Répercussions de la libéralisation du commerce des services sur le ...

    International Development Research Centre (IDRC) Digital Library (Canada)

    Répercussions de la libéralisation du commerce des services sur le développement. La documentation économique a démontré l'importance du secteur des services dans le processus de croissance économique et de développement social. Le principal défi auquel sont confrontés aujourd'hui les pays en développement ...

  5. EggLib: processing, analysis and simulation tools for population genetics and genomics.

    Science.gov (United States)

    De Mita, Stéphane; Siol, Mathieu

    2012-04-11

    With the considerable growth of available nucleotide sequence data over the last decade, integrated and flexible analytical tools have become a necessity. In particular, in the field of population genetics, there is a strong need for automated and reliable procedures to conduct repeatable and rapid polymorphism analyses, coalescent simulations, data manipulation and estimation of demographic parameters under a variety of scenarios. In this context, we present EggLib (Evolutionary Genetics and Genomics Library), a flexible and powerful C++/Python software package providing efficient and easy to use computational tools for sequence data management and extensive population genetic analyses on nucleotide sequence data. EggLib is a multifaceted project involving several integrated modules: an underlying computationally efficient C++ library (which can be used independently in pure C++ applications); two C++ programs; a Python package providing, among other features, a high level Python interface to the C++ library; and the egglib script which provides direct access to pre-programmed Python applications. EggLib has been designed aiming to be both efficient and easy to use. A wide array of methods are implemented, including file format conversion, sequence alignment edition, coalescent simulations, neutrality tests and estimation of demographic parameters by Approximate Bayesian Computation (ABC). Classes implementing different demographic scenarios for ABC analyses can easily be developed by the user and included to the package. EggLib source code is distributed freely under the GNU General Public License (GPL) from its website http://egglib.sourceforge.net/ where a full documentation and a manual can also be found and downloaded.

  6. Forensic Discrimination of Latent Fingerprints Using Laser-Induced Breakdown Spectroscopy (LIBS) and Chemometric Approaches.

    Science.gov (United States)

    Yang, Jun-Ho; Yoh, Jack J

    2018-01-01

    A novel technique is reported for separating overlapping latent fingerprints using chemometric approaches that combine laser-induced breakdown spectroscopy (LIBS) and multivariate analysis. The LIBS technique provides the capability of real time analysis and high frequency scanning as well as the data regarding the chemical composition of overlapping latent fingerprints. These spectra offer valuable information for the classification and reconstruction of overlapping latent fingerprints by implementing appropriate statistical multivariate analysis. The current study employs principal component analysis and partial least square methods for the classification of latent fingerprints from the LIBS spectra. This technique was successfully demonstrated through a classification study of four distinct latent fingerprints using classification methods such as soft independent modeling of class analogy (SIMCA) and partial least squares discriminant analysis (PLS-DA). The novel method yielded an accuracy of more than 85% and was proven to be sufficiently robust. Furthermore, through laser scanning analysis at a spatial interval of 125 µm, the overlapping fingerprints were reconstructed as separate two-dimensional forms.

  7. Laser-Induced Breakdown Spectroscopy (LIBS) in a Novel Molten Salt Aerosol System.

    Science.gov (United States)

    Williams, Ammon N; Phongikaroon, Supathorn

    2017-04-01

    In the pyrochemical separation of used nuclear fuel (UNF), fission product, rare earth, and actinide chlorides accumulate in the molten salt electrolyte over time. Measuring this salt composition in near real-time is advantageous for operational efficiency, material accountability, and nuclear safeguards. Laser-induced breakdown spectroscopy (LIBS) has been proposed and demonstrated as a potential analytical approach for molten LiCl-KCl salts. However, all the studies conducted to date have used a static surface approach which can lead to issues with splashing, low repeatability, and poor sample homogeneity. In this initial study, a novel molten salt aerosol approach has been developed and explored to measure the composition of the salt via LIBS. The functionality of the system has been demonstrated as well as a basic optimization of the laser energy and nebulizer gas pressure used. Initial results have shown that this molten salt aerosol-LIBS system has a great potential as an analytical technique for measuring the molten salt electrolyte used in this UNF reprocessing technology.

  8. Identification of offal adulteration in beef by laser induced breakdown spectroscopy (LIBS).

    Science.gov (United States)

    Velioglu, Hasan Murat; Sezer, Banu; Bilge, Gonca; Baytur, Süleyman Efe; Boyaci, Ismail Hakki

    2018-04-01

    Minced meat is the major ingredient in sausages, beef burgers, and similar products; and thus it is the main product subjected to adulteration with meat offal. Determination of this kind of meat adulteration is crucial due to religious, economic and ethical concerns. The aim of the present study is to discriminate the beef meat and offal samples by using laser induced breakdown spectroscopy (LIBS). To this end, LIBS and multivariate data analysis were used to discriminate pure beef and offal samples qualitatively and to determine the offal mixture adulteration quantitatively. In this analysis, meat samples were frozen and LIBS analysis were performed. The results indicate that by using principal component analysis (PCA), discrimination of pure offal and offal mixture adulterated beef samples can be achieved successfully. Besides, adulteration ratio can be determined using partial least square analysis method (PLS) with 0.947 coefficient of determination (R 2 ) and 3.8% of limit of detection (LOD) values for offal mixture adulterated beef samples. Copyright © 2017 Elsevier Ltd. All rights reserved.

  9. [Quantitative Analysis of Heavy Metals in Water with LIBS Based on Signal-to-Background Ratio].

    Science.gov (United States)

    Hu, Li; Zhao, Nan-jing; Liu, Wen-qing; Fang, Li; Zhang, Da-hai; Wang, Yin; Meng, De Shuo; Yu, Yang; Ma, Ming-jun

    2015-07-01

    There are many influence factors in the precision and accuracy of the quantitative analysis with LIBS technology. According to approximately the same characteristics trend of background spectrum and characteristic spectrum along with the change of temperature through in-depth analysis, signal-to-background ratio (S/B) measurement and regression analysis could compensate the spectral line intensity changes caused by system parameters such as laser power, spectral efficiency of receiving. Because the measurement dates were limited and nonlinear, we used support vector machine (SVM) for regression algorithm. The experimental results showed that the method could improve the stability and the accuracy of quantitative analysis of LIBS, and the relative standard deviation and average relative error of test set respectively were 4.7% and 9.5%. Data fitting method based on signal-to-background ratio(S/B) is Less susceptible to matrix elements and background spectrum etc, and provides data processing reference for real-time online LIBS quantitative analysis technology.

  10. Rapid Analysis of Ash Composition Using Laser-Induced Breakdown Spectroscopy (LIBS)

    Energy Technology Data Exchange (ETDEWEB)

    Tyler L. Westover

    2013-01-01

    Inorganic compounds are known to be problematic in the thermochemical conversion of biomass to syngas and ultimately hydrocarbon fuels. The elements Si, K, Ca, Na, S, P, Cl, Mg, Fe, and Al are particularly problematic and are known to influence reaction pathways, contribute to fouling and corrosion, poison catalysts, and impact waste streams. Substantial quantities of inorganic species can be entrained in the bark of trees during harvest operations. Herbaceous feedstocks often have even greater quantities of inorganic constituents, which can account for as much as one-fifth of the total dry matter. Current methodologies to measure the concentrations of these elements, such as inductively coupled plasma-optical emission spectrometry/mass spectrometry (ICP-OES/MS) are expensive in time and reagents. This study demonstrates that a new methodology employing laser-induced breakdown spectroscopy (LIBS) can rapidly and accurately analyze the inorganic constituents in a wide range of biomass materials, including both woody and herbaceous examples. This technique requires little or no sample preparation, does not consume any reagents, and the analytical data is available immediately. In addition to comparing LIBS data with the results from ICP-OES methods, this work also includes discussions of sample preparation techniques, calibration curves for interpreting LIBS spectra, minimum detection limits, and the use of internal standards and standard reference materials.

  11. Final report on feasibility of real-time geochemical analysis at Yucca Mountain, Nevada, using LIBS technology

    International Nuclear Information System (INIS)

    Blacic, J.D.; Pettit, D.R.; Cremers, D.A.

    1996-12-01

    Laser-induced breakdown spectroscopy (LIBS) is an analytic method whereby an intense laser pulse is used to vaporize and excite a small volume of material into atomic emission. Calibrated spectral analysis of the laser spark light provides detection and quantification of the elemental composition of the target material. We performed laboratory and field tests to assess the feasibility of developing field-portable LIBS-based instruments for real-time analyses of Yucca Mountain rocks in conjunction with Yucca Mountain Project drilling, coring, sampling, and characterization tasks. We developed one prototype instrument designed to analyze air core drilling dust and another prototype instrument designed to analyze rock and fracture surfaces. In realistic field tests at the Exploratory Studies Facility at Yucca Mountain, Nevada, we demonstrated that the LIBS prototypes are capable of measuring major, minor, and some trace elements in real time. Laboratory LIBS analyses show that we can identify characteristic element ratios in a range of manganese oxide minerals present at Yucca Mountain as fracture surface coatings and matrix grains. Preliminary LIBS analyses also indicate that the U/Na ratio may distinguish tuffs containing the hazardous zeolite mineral erionite from non-erionite bearing tuffs, and that a LIBS-based instrument may be useful to detect in real time the probable presence of erionite encountered in core drilling and other operations at Yucca Mountain

  12. Mahseers genera Tor and Neolissochilus (Teleostei: Cyprinidae) from southern Vietnam.

    Science.gov (United States)

    Hoàng, Huy Đức; Phạm, Hùng Mạnh; Durand, Jean-Dominique; Trần, Ngân Trọng; Phan, Phúc Đình

    2015-08-25

    Two new species and two new basin records of mahseers in the genera Tor and Neolissochilus are described from the upper Krong No and middle Đồng Nai drainages of the Langbiang Plateau in southern Vietnam. These new species and new records are known from streams and rivers in montane mixed pine and evergreen forests between 140 and 1112 m. Their populations are isolated in the Sre Pok River of the Mekong basin, the middle of the Đồng Nai basin, and the An Lão River. Both new species are differentiated from their congeners by a combination of the following characters: 23-24 lateral scales, 9-10 predorsal scales, 2/7 or 1/8 pelvic-fin rays, mouth position, median lobe of lower lip, rostral hood, colour in life and by divergent mitochondrial DNA. Tor mekongensis sp. nov. is differentiated from Tor dongnaiensis sp. nov. by the number of transverse scale rows (3/1/2 vs. 4/1/2), number of pelvic-fin rays (2/7 vs. 1/8), a blunt rostral hood vs. pointed, caudal-fin lobes that are equal vs. unequal, and by mitochondrial DNA (0.7% sequence divergence). Molecular evidence identifies both species as members of the genus Tor and distinct from all congeners sampled (uncorrected sequence divergences >1.9% for all Tor species for which homologous COI sequences are available). Tor sinensis is recorded in the Krong No and the Sre Pok rivers, further south of its known distribution. Polymorphism is described in Neolissochilus stracheyi with a Tor-like morph and a Neolissochilus-like morph.

  13. Calibration of the MSL/ChemCam/LIBS Remote Sensing Composition Instrument

    Science.gov (United States)

    Wiens, R. C.; Maurice S.; Bender, S.; Barraclough, B. L.; Cousin, A.; Forni, O.; Ollila, A.; Newsom, H.; Vaniman, D.; Clegg, S.; hide

    2011-01-01

    The ChemCam instrument suite on board the 2011 Mars Science Laboratory (MSL) Rover, Curiosity, will provide remote-sensing composition information for rock and soil samples within seven meters of the rover using a laser-induced breakdown spectroscopy (LIBS) system, and will provide context imaging with a resolution of 0.10 mradians using the remote micro-imager (RMI) camera. The high resolution is needed to image the small analysis footprint of the LIBS system, at 0.2-0.6 mm diameter. This fine scale analytical capability will enable remote probing of stratigraphic layers or other small features the size of "blueberries" or smaller. ChemCam is intended for rapid survey analyses within 7 m of the rover, with each measurement taking less than 6 minutes. Repeated laser pulses remove dust coatings and provide depth profiles through weathering layers, allowing detailed investigation of rock varnish features as well as analysis of the underlying pristine rock composition. The LIBS technique uses brief laser pulses greater than 10 MW/square mm to ablate and electrically excite material from the sample of interest. The plasma emits photons with wavelengths characteristic of the elements present in the material, permitting detection and quantification of nearly all elements, including the light elements H, Li, Be, B, C, N, O. ChemCam LIBS projects 14 mJ of 1067 nm photons on target and covers a spectral range of 240-850 nm with resolutions between 0.15 and 0.60 nm FWHM. The Nd:KGW laser is passively cooled and is tuned to provide maximum power output from -10 to 0 C, though it can operate at 20% degraded energy output at room temperature. Preliminary calibrations were carried out on the flight model (FM) in 2008. However, the detectors were replaced in 2009, and final calibrations occurred in April-June, 2010. This presentation describes the LIBS calibration and characterization procedures and results, and details plans for final analyses during rover system thermal testing

  14. Conspectus of the genera Amylotheca, Cyne, Decaisnina, Lampas, Lepeostegeres, and Loxanthera (Loranthaceae)

    NARCIS (Netherlands)

    Barlow, Bryan A.

    1993-01-01

    The Australasian/Malesian group of genera Amylotheca, Cyne, Decaisnina, Lampas, Lepeostegeres and Loxanthera is reviewed. Particular attention is given to the species of the Malesian region, as a precursor to a treatment of Loranthaceae for Flora Malesiana. The genera are part of a floristic element

  15. Privisional key to the genera of Loranthaceae and Viscaceae of the Flora Malesiana region

    NARCIS (Netherlands)

    Barlow, B.A.

    1991-01-01

    Precursor publications by the author are in press or in preparation prior to a treatment of the mistletoe families Loranthaceae and Viscaceae for the Flora Malesiana. The provisional keys to genera set out below is offered as an indication of the genera which are accepted for the region. Comments on

  16. New taxa, including three new genera show uniqueness of Neotropical Nepticulidae (Lepidoptera)

    NARCIS (Netherlands)

    Nieukerken, van E.J.; Doorenweerd, C.; Nishida, K.; Snyers, C.

    2016-01-01

    After finding distinct clades in a molecular phylogeny for Nepticulidae that could not be placed in any known genera and discovering clear apomorphic characters that define these clades, as well as a number of Neotropical species that could be placed in known genera but were undescribed, three new

  17. Evidence of Possible Evolutionary Divergence in Plant Genera Based on Antioxidant Properties

    Science.gov (United States)

    Asai, Elizabeth; Cao, Sharon

    2009-01-01

    The purpose of this investigation was to determine if three Western species of the Panax, Lycium, and Astragalus genera had antibacterial and/or antioxidant properties, and how their properties compared to Eastern herbs in the same genera. The group hypothesized that when compared, the corresponding herbs would have identical antibacterial and…

  18. A revision of the orchid genera Ania Lindley, Hancockia Rolfe, Mischobulbum Schltr. and Tainia Blume

    NARCIS (Netherlands)

    Turner, Hubert

    1992-01-01

    This study presents a taxonomic revision of the orchid genera Ania, Hancockia, Mischobulbum and Tainia. Keys to the genera and species are given, together with a desciption of each species. All species are also represented by line drawings. In toto, 31 species and 2 subspecies are recognised. Four

  19. Pollen morphology within the Monodora clade, a diverse group of five African Annonaceae genera

    NARCIS (Netherlands)

    Couvreur, T.L.P.; Botermans, M.; Heuven, Van B.J.; Ham, van der R.W.J.M.

    2008-01-01

    Pollen morphology has played a major role in elucidating infrafamiliar-level systematics and evolution within Annonaceae, especially within the African genera. The Monodora clade is composed of five genera, Asteranthe, Hexalobus, Isolona, Monodora and Uvariastrum, which are restricted to Africa and

  20. Zlepšování limitů detekce spektroskopie laserem indukovaného plazmatu (LIBS) pomocí aplikace nanočástic

    OpenAIRE

    Képeš, Erik

    2014-01-01

    Bakalárska práca popisuje možnosti zlepšovania detekčných limít metódy spektroskopie laserom indukovanej plazmy (LIBS). Zhŕňa modifikácie klasickej aparatúry, ktoré využívajú metódy double-pulsed LIBS (DPLIBS), Townsend effect plasma sectroscopy (TEPS), resonance enhanced LIBS (RELIBS), spark discharge LIBS (SDLIBS), flame-enhanced LIBS (FELIBS) aj nové postupy pri príprave vzoriek, ktoré používa metóda nanoparticle enhanced LIBS (NELIBS). Popisuje mechanizmy, ktoré využívajú jednotlivé metód...

  1. Laser-induced breakdown spectroscopy (LIBS), part II: review of instrumental and methodological approaches to material analysis and applications to different fields.

    Science.gov (United States)

    Hahn, David W; Omenetto, Nicoló

    2012-04-01

    The first part of this two-part review focused on the fundamental and diagnostics aspects of laser-induced plasmas, only touching briefly upon concepts such as sensitivity and detection limits and largely omitting any discussion of the vast panorama of the practical applications of the technique. Clearly a true LIBS community has emerged, which promises to quicken the pace of LIBS developments, applications, and implementations. With this second part, a more applied flavor is taken, and its intended goal is summarizing the current state-of-the-art of analytical LIBS, providing a contemporary snapshot of LIBS applications, and highlighting new directions in laser-induced breakdown spectroscopy, such as novel approaches, instrumental developments, and advanced use of chemometric tools. More specifically, we discuss instrumental and analytical approaches (e.g., double- and multi-pulse LIBS to improve the sensitivity), calibration-free approaches, hyphenated approaches in which techniques such as Raman and fluorescence are coupled with LIBS to increase sensitivity and information power, resonantly enhanced LIBS approaches, signal processing and optimization (e.g., signal-to-noise analysis), and finally applications. An attempt is made to provide an updated view of the role played by LIBS in the various fields, with emphasis on applications considered to be unique. We finally try to assess where LIBS is going as an analytical field, where in our opinion it should go, and what should still be done for consolidating the technique as a mature method of chemical analysis. © 2012 Society for Applied Spectroscopy

  2. Monitoring of heavy metal particle emission in the exhaust duct of a foundry using LIBS

    International Nuclear Information System (INIS)

    Dutouquet, C.; Le Bihan, O.; Dermigny, A.; Frejafon, E.; Gallou, G.; Sirven, J.B.; Torralba, B.

    2014-01-01

    Heavy metals have long been known to be detrimental to human health and the environment.Their emission is mainly considered to occur via the atmospheric route. Most of airborne heavy metals are of anthropogenic origin and produced through combustion processes at industrial sites such as incinerators and foundries. Current regulations impose threshold limits on heavy metal emissions. The reference method currently implemented for quantitative measurements at exhaust stacks consists of on-site sampling of heavy metals on filters for the particulate phase (the most prominent and only fraction considered in this study) prior to subsequent laboratory analysis. Results are therefore known only a few days after sampling. Stiffer regulations require the development of adapted tools allowing automatic, on-site or even in-situ measurements with temporal resolutions. The Laser-Induced Breakdown Spectroscopy (LIBS) technique was deemed as a potential candidate to meet these requirements. On site experiments were run by melting copper bars and monitoring emission of this element in an exhaust duct at a pilot-scale furnace in a French research center dedicated to metal casting. Two approaches designated as indirect and direct analysis were broached in these experiments. The former corresponds to filter enrichment prior to subsequent LIBS interrogation whereas the latter entails laser focusing right through the aerosol for detection. On-site calibration curves were built and compared with those obtained at laboratory scale in order to investigate possible matrix and analyte effects. Eventually, the obtained results in terms of detection limits and quantitative temporal monitoring of copper emission clearly emphasize the potentialities of the direct LIBS measurements. (authors)

  3. Monitoring of heavy metal particle emission in the exhaust duct of a foundry using LIBS.

    Science.gov (United States)

    Dutouquet, C; Gallou, G; Le Bihan, O; Sirven, J B; Dermigny, A; Torralba, B; Frejafon, E

    2014-09-01

    Heavy metals have long been known to be detrimental to human health and the environment. Their emission is mainly considered to occur via the atmospheric route. Most of airborne heavy metals are of anthropogenic origin and produced through combustion processes at industrial sites such as incinerators and foundries. Current regulations impose threshold limits on heavy metal emissions. The reference method currently implemented for quantitative measurements at exhaust stacks consists of on-site sampling of heavy metals on filters for the particulate phase (the most prominent and only fraction considered in this study) prior to subsequent laboratory analysis. Results are therefore known only a few days after sampling. Stiffer regulations require the development of adapted tools allowing automatic, on-site or even in-situ measurements with temporal resolutions. The Laser-Induced Breakdown Spectroscopy (LIBS) technique was deemed as a potential candidate to meet these requirements. On site experiments were run by melting copper bars and monitoring emission of this element in an exhaust duct at a pilot-scale furnace in a French research center dedicated to metal casting. Two approaches designated as indirect and direct analysis were broached in these experiments. The former corresponds to filter enrichment prior to subsequent LIBS interrogation whereas the latter entails laser focusing right through the aerosol for detection. On-site calibration curves were built and compared with those obtained at laboratory scale in order to investigate possible matrix and analyte effects. Eventually, the obtained results in terms of detection limits and quantitative temporal monitoring of copper emission clearly emphasize the potentialities of the direct LIBS measurements. Copyright © 2014 Elsevier B.V. All rights reserved.

  4. Measurement system for high-sensitivity LIBS analysis using ICCD camera in LabVIEW environment

    International Nuclear Information System (INIS)

    Zaytsev, S M; Popov, A M; Zorov, N B; Labutin, T A

    2014-01-01

    A measurement system based on ultrafast (up to 10 ns time resolution) intensified CCD detector ''Nanogate-2V'' (Nanoscan, Russia) was developed for high-sensitivity analysis by Laser-Induced Breakdown Spectrometry (LIBS). LabVIEW environment provided a high level of compatibility with variety of electronic instruments and an easy development of user interface, while Visual Studio environment was used for creation of LabVIEW compatible dll library with the use of ''Nanogate-2V'' SDK. The program for camera management and laser-induced plasma spectra registration was created with the use of Call Library Node in LabVIEW. An algorithm of integration of the second device ADC ''PCI-9812'' (ADLINK) to the measurement system was proposed and successfully implemented. This allowed simultaneous registration of emission and acoustic signals under laser ablation. The measured resolving power of spectrometer-ICCD system was equal to 12000 at 632 nm. An electron density of laser plasma was estimated with the use of H-α Balmer line. Steel spectra obtained at different delays were used for selection of the optimal conditions for manganese analytical signal registration. The feature of accumulation of spectra from several laser pulses was shown. The accumulation allowed reliable observation of silver signal at 328.07 nm in the LIBS spectra of soil (C Ag = 4.5 ppm). Finally, the correlation between acoustic and emission signals of plasma was found. Thus, technical possibilities of the developed LIBS system were demonstrated both for plasma diagnostics and analytical measurements

  5. Mixed Methods Not Mixed Messages: Improving LibGuides with Student Usability Data

    Directory of Open Access Journals (Sweden)

    Nora Almeida

    2017-12-01

    Full Text Available Abstract Objective – This article describes a mixed methods usability study of research guides created using the LibGuides 2.0 platform conducted in 2016 at an urban, public university library. The goal of the study was to translate user design and learning modality preferences into executable design principles, and ultimately to improve the design and usage of LibGuides at the New York City College of Technology Library. Methods – User-centred design demands that stakeholders participate in each stage of an application’s development and that assumptions about user design preferences are validated through testing. Methods used for this usability study include: a task analysis on paper prototypes with a think aloud protocol (TAP, an advanced scribbling technique modeled on the work of Linek and Tochtermann (2015, and semi-structured interviews. The authors introduce specifics of each protocol in addition to data collection and analysis methods. Results – The authors present quantitative and qualitative student feedback on navigation layouts, terminology, and design elements and discuss concrete institutional and technical measures they will take to implement best practices. Additionally, the authors discuss students’ impressions of multimedia, text-based, and interactive instructional content in relation to specific research scenarios defined during the usability test. Conclusion – The authors translate study findings into best practices that can be incorporated into custom user-centric LibGuide templates and assets. The authors also discuss relevant correlations between students’ learning modality preferences and design feedback, and identify several areas that warrant further research. The authors believe this study will spark a larger discussion about relationships between instructional design, learning modalities, and research guide use contexts.

  6. Qualitative Analysis of Dairy and Powder Milk Using Laser-Induced Breakdown Spectroscopy (LIBS).

    Science.gov (United States)

    Alfarraj, Bader A; Sanghapi, Herve K; Bhatt, Chet R; Yueh, Fang Y; Singh, Jagdish P

    2018-01-01

    Laser-induced breakdown spectroscopy (LIBS) technique was used to compare various types of commercial milk products. Laser-induced breakdown spectroscopy spectra were investigated for the determination of the elemental composition of soy and rice milk powder, dairy milk, and lactose-free dairy milk. The analysis was performed using radiative transitions. Atomic emissions from Ca, K, Na, and Mg lines observed in LIBS spectra of dairy milk were compared. In addition, proteins and fat level in milks can be determined using molecular emissions such as CN bands. Ca concentrations were calculated to be 2.165 ± 0.203 g/L in 1% of dairy milk fat samples and 2.809 ± 0.172 g/L in 2% of dairy milk fat samples using the standard addition method (SAM) with LIBS spectra. Univariate and multivariate statistical analysis methods showed that the contents of major mineral elements were higher in lactose-free dairy milk than those in dairy milk. The principal component analysis (PCA) method was used to discriminate four milk samples depending on their mineral elements concentration. In addition, proteins and fat level in dairy milks were determined using molecular emissions such as CN band. We applied partial least squares regression (PLSR) and simple linear regression (SLR) models to predict levels of milk fat in dairy milk samples. The PLSR model was successfully used to predict levels of milk fat in dairy milk sample with the relative accuracy (RA%) less than 6.62% using CN (0,0) band.

  7. Assessment and forensic application of laser-induced breakdown spectroscopy (LIBS) for the discrimination of Australian window glass.

    Science.gov (United States)

    El-Deftar, Moteaa M; Speers, Naomi; Eggins, Stephen; Foster, Simon; Robertson, James; Lennard, Chris

    2014-08-01

    A commercially available laser-induced breakdown spectroscopy (LIBS) instrument was evaluated for the determination of elemental composition of twenty Australian window glass samples, consisting of 14 laminated samples and 6 non-laminated samples (or not otherwise specified) collected from broken windows at crime scenes. In this study, the LIBS figures of merit were assessed in terms of accuracy, limits of detection and precision using three standard reference materials (NIST 610, 612, and 1831). The discrimination potential of LIBS was compared to that obtained using laser ablation inductively coupled plasma mass spectrometry (LA-ICP-MS), X-ray microfluorescence spectroscopy (μXRF) and scanning electron microscopy energy dispersive X-ray spectrometry (SEM-EDX) for the analysis of architectural window glass samples collected from crime scenes in the Canberra region, Australia. Pairwise comparisons were performed using a three-sigma rule, two-way ANOVA and Tukey's HSD test at 95% confidence limit in order to investigate the discrimination power for window glass analysis. The results show that the elemental analysis of glass by LIBS provides a discrimination power greater than 97% (>98% when combined with refractive index data), which was comparable to the discrimination powers obtained by LA-ICP-MS and μXRF. These results indicate that LIBS is a feasible alternative to the more expensive LA-ICP-MS and μXRF options for the routine forensic analysis of window glass samples. Copyright © 2014 Elsevier Ireland Ltd. All rights reserved.

  8. Accuracy Enhancement of Raman Spectroscopy Using Complementary Laser-Induced Breakdown Spectroscopy (LIBS) with Geologically Mixed Samples.

    Science.gov (United States)

    Choi, Soojin; Kim, Dongyoung; Yang, Junho; Yoh, Jack J

    2017-04-01

    Quantitative Raman analysis was carried out with geologically mixed samples that have various matrices. In order to compensate the matrix effect in Raman shift, laser-induced breakdown spectroscopy (LIBS) analysis was performed. Raman spectroscopy revealed the geological materials contained in the mixed samples. However, the analysis of a mixture containing different matrices was inaccurate due to the weak signal of the Raman shift, interference, and the strong matrix effect. On the other hand, the LIBS quantitative analysis of atomic carbon and calcium in mixed samples showed high accuracy. In the case of the calcite and gypsum mixture, the coefficient of determination of atomic carbon using LIBS was 0.99, while the signal using Raman was less than 0.9. Therefore, the geological composition of the mixed samples is first obtained using Raman and the LIBS-based quantitative analysis is then applied to the Raman outcome in order to construct highly accurate univariate calibration curves. The study also focuses on a method to overcome matrix effects through the two complementary spectroscopic techniques of Raman spectroscopy and LIBS.

  9. Monitoring of Cr, Cu, Pb, V and Zn in polluted soils by laser induced breakdown spectroscopy (LIBS).

    Science.gov (United States)

    Dell'Aglio, Marcella; Gaudiuso, Rosalba; Senesi, Giorgio S; De Giacomo, Alessandro; Zaccone, Claudio; Miano, Teodoro M; De Pascale, Olga

    2011-05-01

    Laser Induced Breakdown Spectroscopy (LIBS) is a fast and multi-elemental analytical technique particularly suitable for the qualitative and quantitative analysis of heavy metals in solid samples, including environmental ones. Although LIBS is often recognised in the literature as a well-established analytical technique, results about quantitative analysis of elements in chemically complex matrices such as soils are quite contrasting. In this work, soil samples of various origins have been analyzed by LIBS and data compared to those obtained by Inductively Coupled Plasma-Optical Emission Spectroscopy (ICP-OES). The emission intensities of one selected line for each of the five analytes (i.e., Cr, Cu, Pb, V, and Zn) were normalized to the background signal, and plotted as a function of the concentration values previously determined by ICP-OES. Data showed a good linearity for all calibration lines drawn, and the correlation between ICP-OES and LIBS was confirmed by the satisfactory agreement obtained between the corresponding values. Consequently, LIBS method can be used at least for metal monitoring in soils. In this respect, a simple method for the estimation of the soil pollution degree by heavy metals, based on the determination of an anthropogenic index, was proposed and determined for Cr and Zn.

  10. Exploration of Mars with the ChemCam LIBS Instrument and the Curiosity Rover

    Science.gov (United States)

    Newsom, Horton E.

    2016-01-01

    The Mars Science Laboratory (MSL) Curiosity rover landed on Mars in August 2012, and has been exploring the planet ever since. Dr. Horton E. Newsom will discuss the MSL's design and main goal, which is to characterize past environments that may have been conducive to the evolution and sustainability of life. He will also discuss Curiosity's science payload, and remote sensing, analytical capabilities, and direct discoveries of the Chemistry & Camera (ChemCam) instrument, which is the first Laser Induced Breakdown Spectrometer (LIBS) to operate on another planetary surface and determine the chemistry of the rocks and soils.

  11. Analisi sui pigmenti di ceramica neolitica tramite tecniche Raman e LIBS

    Directory of Open Access Journals (Sweden)

    Cristina Fabbri

    2007-04-01

    Full Text Available I dati presentati in questo breve contributo provengono da uno studio condotto in collaborazione dal Dipartimento di Scienze Archeologiche dell’Università di Pisa e dall’Istituto per i Processi Chimico-Fisici di Fisica molecolare del CNR di Pisa. Le metodologie applicate sono basate sull’analisi integrata delle tecniche spettroscopiche Raman e LIBS già ampiamente utilizzate nel campo dei Beni Culturali; i metodi sono infatti essenzialmente non distruttivi, non richiedono di un pre trattamento del campione e l’acquisizione delle misure è immediata.

  12. Identification of Four Wood Species by an Electronic Nose and by LIBS

    Directory of Open Access Journals (Sweden)

    Juliana R. Cordeiro

    2012-01-01

    Full Text Available This paper presents two complementary methods capable of identifying four wood species (Cedrela fissilis, Ocotea porosa, Hymenolobium petraeum, and Aspidosperma subincanum both by their volatile organic compounds and by the presence of 10 chemical elements: Al, B, Ca, Mg, Zn, Cu, Mn, Fe, Na, and Si. The volatile compounds were detected by an electronic nose formed by an array of three different conductive polymer gas sensors. The elemental determination was made by laser-induced breakdown spectrometry (LIBS. The emissions measured were treated by principal component analysis (PCA. Leave-one-out analysis showed a rate of hits of 100%.

  13. Relationship between LIBS Ablation and Pit Volume for Geologic Samples: Applications for in situ Absolute Geochronology

    Science.gov (United States)

    Devismes, D.; Cohen, Barbara A.

    2014-01-01

    In planetary sciences, in situ absolute geochronology is a scientific and engineering challenge. Currently, the age of the Martian surface can only be determined by crater density counting. However this method has significant uncertainties and needs to be calibrated with absolute ages. We are developing an instrument to acquire in situ absolute geochronology based on the K-Ar method. The protocol is based on the laser ablation of a rock by hundreds of laser pulses. Laser Induced Breakdown Spectroscopy (LIBS) gives the potassium content of the ablated material and a mass spectrometer (quadrupole or ion trap) measures the quantity of 40Ar released. In order to accurately measure the quantity of released 40Ar in cases where Ar is an atmospheric constituent (e.g., Mars), the sample is first put into a chamber under high vacuum. The 40Arquantity, the concentration of K and the estimation of the ablated mass are the parameters needed to give the age of the rocks. The main uncertainties with this method are directly linked to the measures of the mass (typically some µg) and of the concentration of K by LIBS (up to 10%). Because the ablated mass is small compared to the mass of the sample, and because material is redeposited onto the sample after ablation, it is not possible to directly measure the ablated mass. Our current protocol measures the ablated volume and estimates the sample density to calculate ablated mass. The precision and accuracy of this method may be improved by using knowledge of the sample's geologic properties to predict its response to laser ablation, i.e., understanding whether natural samples have a predictable relationship between laser energy deposited and resultant ablation volume. In contrast to most previous studies of laser ablation, theoretical equations are not highly applicable. The reasons are numerous, but the most important are: a) geologic rocks are complex, polymineralic materials; b) the conditions of ablation are unusual (for example

  14. Remote Raman - laser induced breakdown spectroscopy (LIBS) geochemical investigation under Venus atmospheric conditions

    Energy Technology Data Exchange (ETDEWEB)

    Clegg, Sanuel M [Los Alamos National Laboratory; Barefield, James E [Los Alamos National Laboratory; Humphries, Seth D [Los Alamos National Laboratory; Wiens, Roger C [Los Alamos National Laboratory; Vaniman, D. T. [Los Alamos National Laboratory; Sharma, S. K. [UNIV OF HAWAII; Misra, A. K. [UNIV OF HAWAII; Dyar, M. D. [MT. HOLYOKE COLLEGE; Smrekar, S. E. [JET PROPULSION LAB.

    2010-12-13

    The extreme Venus surface temperatures ({approx}740 K) and atmospheric pressures ({approx}93 atm) create a challenging environment for surface missions. Scientific investigations capable of Venus geochemical observations must be completed within hours of landing before the lander will be overcome by the harsh atmosphere. A combined remote Raman - LIBS (Laser Induced Breakdown Spectroscopy) instrument is capable of accomplishing the geochemical science goals without the risks associated with collecting samples and bringing them into the lander. Wiens et al. and Sharma et al. demonstrated that both analytical techniques can be integrated into a single instrument capable of planetary missions. The focus of this paper is to explore the capability to probe geologic samples with Raman - LIBS and demonstrate quantitative analysis under Venus surface conditions. Raman and LIBS are highly complementary analytical techniques capable of detecting both the mineralogical and geochemical composition of Venus surface materials. These techniques have the potential to profoundly increase our knowledge of the Venus surface composition, which is currently limited to geochemical data from Soviet Venera and VEGA landers that collectively suggest a surface composition that is primarily tholeiitic basaltic with some potentially more evolved compositions and, in some locations, K-rich trachyandesite. These landers were not equipped to probe the surface mineralogy as can be accomplished with Raman spectroscopy. Based on the observed compositional differences and recognizing the imprecise nature of the existing data, 15 samples were chosen to constitute a Venus-analog suite for this study, including five basalts, two each of andesites, dacites, and sulfates, and single samples of a foidite, trachyandesite, rhyolite, and basaltic trachyandesite under Venus conditions. LIBS data reduction involved generating a partial least squares (PLS) model with a subset of the rock powder standards to

  15. Creating a Current Awareness Service Using Yahoo! Pipes and LibGuides

    Directory of Open Access Journals (Sweden)

    Elizabeth Kiscaden

    2014-12-01

    Full Text Available Migration from print to electronic journals brought an end to traditional current awareness services, which primarily utilized print routing. The emergence of Real Simple Syndication, or RSS feeds, and email alerting systems provided users with alternative services. To assist users with adopting these technologies, a service utilizing aggregate feeds to the library’s electronic journal content was created and made available through LibGuides. Libraries can resurrect current awareness services using current technologies to increase awareness and usage of library-provided electronic journal content. The current awareness service presented is an example of how libraries can build simple current awareness services utilizing freely accessible technologies.

  16. Minimizing core deposits radiation fields in PWRs by coordinated Li/B chemistry

    International Nuclear Information System (INIS)

    Roesmer, J.

    1983-01-01

    The effect of coolant chemistry on the buildup and composition of core deposits and on out-of-core radiation fields was investigated in the Beaver Valley and Trojan plants. Coordinated Li/B coolant chemistry led to an appreciable reduction of the surface concentration of core deposits, decreased greatly the formation of crud films on fresh fuel, and resulted in a reduction in the rate and level of radiation field buildup in the out-of-core regions of the primary circuits. (author)

  17. Calibrating the ChemCam LIBS for Carbonate Minerals on Mars

    Science.gov (United States)

    Wiens, Roger C.; Clegg, Samuel M.; Ollila, Ann M.; Barefield, James E.; Lanza, Nina; Newsom, Horton E.

    2009-01-01

    The ChemCam instrument suite on board the NASA Mars Science Laboratory (MSL) rover includes the first LIBS instrument for extraterrestrial applications. Here we examine carbonate minerals in a simulated martian environment using the LIDS technique in order to better understand the in situ signature of these materials on Mars. Both chemical composition and rock type are determined using multivariate analysis (MVA) techniques. Composition is confirmed using scanning electron microscopy (SEM) techniques. Our initial results suggest that ChemCam can recognize and differentiate between carbonate materials on Mars.

  18. A preliminary list of bee genera in the Kingdom of Saudi Arabia (Hymenoptera: Apoidea

    Directory of Open Access Journals (Sweden)

    Michael S. Engel

    2013-01-01

    Full Text Available A brief overview of those bee genera and subgenera occurring in the Kingdom of Saudi Arabia is provided. In total 22 genera are currently documented in the literature for the country, although a further 17 genera undoubtedly occur here based on extralimital records. The lists provided here will serve as a baseline for biodiversity studies on the bee fauna of the country that are presently underway. The anthidiine genus Icteranthidium Michener (Megachilidae and the dasypodaine genus Promelitta Warncke (Melittidae are newly recorded for the country.

  19. A pictorial key and diagnosis of the Brazilian genera of Micropezidae (Diptera, Nerioidea

    Directory of Open Access Journals (Sweden)

    Gustavo Borges Ferro

    2014-03-01

    Full Text Available A pictorial key and diagnosis of the Brazilian genera of Micropezidae (Diptera, Nerioidea. This paper provides the first pictorial key and diagnosis for the Brazilian genera of the Micropezidae, based on external morphological characters illustrated with photographs. The key includes 13 genera: Cardiacephala Macquart, Cliobata Enderlein, Grallipeza Rondani, Metasphen Frey, Micropeza Meigen, Parasphen Enderlein, Planipeza Marshall, Plocoscelus Enderlein, Poecilotylus Hennig, Ptilosphen Enderlein, Rainieria Rondani, Scipopus Enderlein and Taeniaptera Macquart. For each genus, the species known to occur in Brazil are listed and their distribution records, including new ones, are provided.

  20. Applicability of Machine-Learning Enabled LIBS in Post Irradiation Nuclear Forensic Analysis of High Level Waste

    International Nuclear Information System (INIS)

    Onkongi, J.; Maina, D.; Angeyo, H.K.

    2017-01-01

    Nuclear Forensics seeks Information to determine; Chemical Composition, Routes of transit, Origin (Provenance) and Intended use. Post Irradiation/Post detonation NF In a post-detonation event could you get clues/signatures from glass debris, minute sample sizes? Nuclear Forensic Technique Should be State-of -the art that is Rapid, Non-invasive, Remote ability and Non-destructive. Laser Induced Breakdown Spectroscopy (LIBS) unlike other Analytic Techniques that require tedious sample preparations such as Dissolution, digestion & matrix removal, which generate additional nuclear wastes that require proper Procedures for handling, storage & ultimate disposal, LIBS overcomes these limitations. Utility of Machine Learning Techniques employed include; Artificial Neural Networks, ANN (Regression/Modelling), Principal component Analysis, PCA (Classification) and Support Vector Machine SVM (Comparative study/Classification Machine Learning coupled with LIBS gives a state of the art analytic method. Utility of the technic in safeguards security and non-proliferation

  1. Direct Determination of Contaminants and Major and Minor Nutrients in Solid Fertilizers Using Laser-Induced Breakdown Spectroscopy (LIBS).

    Science.gov (United States)

    Andrade, Daniel F; Pereira-Filho, Edenir Rodrigues

    2016-10-11

    Contaminants (Cd, Cr, and Pb) as well as minor (B, Cu, Mn, Na, and Zn) and major (Ca and Mg) elements were directly determined in solid fertilizer samples using laser-induced breakdown spectroscopy (LIBS). Factorial designs were used to define the most appropriate LIBS parameters and pellet pressure on solid fertilizers. Emission lines for all of the analytes were collected and employed 12 signal normalization modes. The best results were obtained using a laser energy of 75 mJ, a spot size of 50 μm, a pressure of 10 t/in., and a delay of 2.0 μs. Good correlation was obtained between the calibration model's prediction using the proposed LIBS method and the reference values obtained with ICP-OES. The limits of detection (LOD) for the proposed method varied from 2 mg/kg (for Cd) to 1% (for Zn).

  2. Qualitative and quantitative analysis of milk for the detection of adulteration by Laser Induced Breakdown Spectroscopy (LIBS).

    Science.gov (United States)

    Moncayo, S; Manzoor, S; Rosales, J D; Anzano, J; Caceres, J O

    2017-10-01

    The present work focuses on the development of a fast and cost effective method based on Laser Induced Breakdown Spectroscopy (LIBS) to the quality control, traceability and detection of adulteration in milk. Two adulteration cases have been studied; a qualitative analysis for the discrimination between different milk blends and quantification of melamine in adulterated toddler milk powder. Principal Component Analysis (PCA) and neural networks (NN) have been used to analyze LIBS spectra obtaining a correct classification rate of 98% with a 100% of robustness. For the quantification of melamine, two methodologies have been developed; univariate analysis using CN emission band and multivariate calibration NN model obtaining correlation coefficient (R 2 ) values of 0.982 and 0.999 respectively. The results of the use of LIBS technique coupled with chemometric analysis are discussed in terms of its potential use in the food industry to perform the quality control of this dairy product. Copyright © 2017 Elsevier Ltd. All rights reserved.

  3. Applicability of Machine-Learning Enabled LIBS in Post Irradiation Nuclear Forensic Analysis of High Level Nuclear Waste

    International Nuclear Information System (INIS)

    Onkongi, J.; Maina, D.; Angeyo, H. K.

    2017-01-01

    Nuclear Forensics seeks Information to determine; Chemical Composition, Routes of transit, Origin (Provenance) and Intended use. Post Irradiation/Post detonation NF In a post-detonation event could you get clues/signatures from glass debris, minute sample sizes? Nuclear Forensic Technique Should be State-of -the art that is Rapid, Non-invasive, Remote ability and Non-destructive. Laser Induced Breakdown Spectroscopy (LIBS) unlike other Analytic Techniques that require tedious sample preparations such as Dissolution, digestion & matrix removal, which generate additional nuclear wastes that require proper Procedures for handling, storage & ultimate disposal, LIBS overcomes these limitations. Utility of Machine Learning Techniques employed include; Artificial Neural Networks, ANN (Regression/Modelling), Principal component Analysis, PCA (Classification) and Support Vector Machine SVM (Comparative study/Classification Machine Learning coupled with LIBS gives a state of the art analytic method. Utility of the technic in safeguards security and non-proliferation

  4. Incorporation of support vector machines in the LIBS toolbox for sensitive and robust classification amidst unexpected sample and system variability.

    Science.gov (United States)

    Dingari, Narahara Chari; Barman, Ishan; Myakalwar, Ashwin Kumar; Tewari, Surya P; Kumar Gundawar, Manoj

    2012-03-20

    Despite the intrinsic elemental analysis capability and lack of sample preparation requirements, laser-induced breakdown spectroscopy (LIBS) has not been extensively used for real-world applications, e.g., quality assurance and process monitoring. Specifically, variability in sample, system, and experimental parameters in LIBS studies present a substantive hurdle for robust classification, even when standard multivariate chemometric techniques are used for analysis. Considering pharmaceutical sample investigation as an example, we propose the use of support vector machines (SVM) as a nonlinear classification method over conventional linear techniques such as soft independent modeling of class analogy (SIMCA) and partial least-squares discriminant analysis (PLS-DA) for discrimination based on LIBS measurements. Using over-the-counter pharmaceutical samples, we demonstrate that the application of SVM enables statistically significant improvements in prospective classification accuracy (sensitivity), because of its ability to address variability in LIBS sample ablation and plasma self-absorption behavior. Furthermore, our results reveal that SVM provides nearly 10% improvement in correct allocation rate and a concomitant reduction in misclassification rates of 75% (cf. PLS-DA) and 80% (cf. SIMCA)-when measurements from samples not included in the training set are incorporated in the test data-highlighting its robustness. While further studies on a wider matrix of sample types performed using different LIBS systems is needed to fully characterize the capability of SVM to provide superior predictions, we anticipate that the improved sensitivity and robustness observed here will facilitate application of the proposed LIBS-SVM toolbox for screening drugs and detecting counterfeit samples, as well as in related areas of forensic and biological sample analysis.

  5. Simulated In Situ Determination of Soil Profile Organic and Inorganic Carbon With LIBS and VisNIR

    Science.gov (United States)

    Bricklemyer, R. S.; Brown, D. J.; Clegg, S. M.; Barefield, J. E.

    2008-12-01

    There is growing need for rapid, accurate, and inexpensive methods to measure, and verify soil organic carbon (SOC) change for national greenhouse gas accounting and the development of a soil carbon trading market. Laser Induced Breakdown Spectroscopy (LIBS) and Visible and Near Infrared Spectroscopy (VisNIR) are complementary analytical techniques that have the potential to fill that need. The LIBS method provides precise elemental analysis of soils, but generally cannot distinguish between organic C and inorganic C. VisNIR has been established as a viable technique for measuring soil properties including SOC and inorganic carbon (IC). As part of the Big Sky Carbon Sequestration Regional Partnership, 240 intact core samples (3.8 x 50 cm) have been collected from six agricultural fields in north central Montana, USA. Each of these core samples were probed concurrently with LIBS and VisNIR at 2.5, 7.5, 12.5, 17.5, 22.5, 27.5, 35 and 45 cm (+/- 1.5 cm) depths. VisNIR measurements were taken using an Analytical Spectral Devices (ASD, Boulder, CO, USA) Agrispec spectrometer to determine the partition of SOC vs. IC in the samples. The LIBS scans were collected with the LANL LIBS Core Scanner Instrument which collected the entire 200 - 900 nm plasma emission including the 247.8 nm carbon emission line. This instrument also collected the emission from the elements typically found in inorganic carbon (Ca and Mg) and organic carbon (H, O, and N). Subsamples of soil (~ 4 g) were taken from interrogation points for laboratory determination of SOC and IC. Using this analytical data, we constructed several full spectrum multivariate VisNIR/LIBS calibration models for SOC and IC. These models were then applied to independent validation cores for model evaluation.

  6. Detection of heavy metals in soils by laser-induced breakdown spectroscopy (LIBS)

    International Nuclear Information System (INIS)

    Sirven, Jean-Baptiste

    2006-01-01

    In the fields of analysis, control and physical measurement, the laser constitutes a particularly powerful and multi-purpose metrological tool, capable to bring concrete solutions to various matters, including of a societal nature. Among the latter, contamination of sites and soils by heavy metals is an important issue of public health which requires to have measurement means adapted to existing regulations and whose use be sufficiently flexible. As a fast technique which does not need any sample preparation, laser-induced breakdown spectroscopy (LIBS) offers very interesting advantages for making on-site measurements of heavy metals content at the 10-ppm level; the design of a portable system is conceivable in the medium term. In this work we first show that the femtosecond regime presents no advantages with respect to the standard nanosecond regime for our issue. Then we implement an advanced treatment of LIBS spectra by chemometric techniques whose performances significantly improve the results of qualitative and quantitative analyses of soils samples. (author)

  7. Laser-induced breakdown spectroscopy (LIBS) for detection of ammonium nitrate in soils

    Science.gov (United States)

    Díaz, Daniel; Hahn, David W.; Molina, Alejandro

    2009-05-01

    The extensive use of improvised explosive devices (IED) by irregular armed groups in Colombia has posed a threat, not only to the Colombian regular army but to the civilian population. It is expected that in future years, after an eventual cease fire, humanitarian missions for IED clearance will be fundamental to secure safe transit of people and goods, particularly in Colombian rural areas. The clandestine nature of IEDs preparation in Colombia yielded a rather diverse nature of these irregular weapons. Although, some have metal parts such as nails and shrapnel, others are metal-free devices in which detonation is obtained by chemical means. Despite this variability in IEDs design, one thing that is common in IEDs preparation is the use of significant amounts of ANFO (ammonium nitrate (AN), fuel oil (FO)) in their construction. The goal of this work was to identify AN and FO in soils using LIBS. Experiments showed the ability of LIBS to identify the presence of AN based on Hα (656.3 nm) and Hβ (486.1 nm) emission lines. It was not possible to identify FO mixed with soils in the spectral windows studied. FO caused a reduction on spark intensity on the samples. This would represent a challenge for identification of chemical compounds in wet soils. Potential interferences with fertilizers are discussed as well.

  8. LIB LAB the Library Laboratory: hands-on multimedia science communication

    Science.gov (United States)

    Fillo, Aaron; Niemeyer, Kyle

    2017-11-01

    Teaching scientific research topics to K-12 audiences in an engaging and meaningful way does not need to be hard; with the right insight and techniques it can be fun to encourage self-guided STEAM (science, technology, engineering, arts, and mathematics) exploration. LIB LAB, short for Library Laboratory, is an educational video series produced by Aaron J. Fillo at Oregon State University in partnership with the Corvallis-Benton County Public Library targeted at K-12 students. Each episode explores a variety of scientific fundamentals with playful experiments and demonstrations. The video lessons are developed using evidence-based practices such as dispelling misconceptions, and language immersion. Each video includes directions for a related experiment that young viewers can conduct at home. In addition, science kits for these at-home experiments are distributed for free to students through the public library network in Benton County, Oregon. This talk will focus on the development of multimedia science education tools and several techniques that scientists can use to engage with a broad audience more effectively. Using examples from the LIB LAB YouTube Channel and collection of hands-on science demonstrations and take-home kits, this talk will present STEAM education in action. Corvallis-Benton County Public Library.

  9. A kinetics study of acetic acid on cobalt leaching of spent LIBs: Shrinking Core Model

    Directory of Open Access Journals (Sweden)

    Setiawan Hendrik

    2018-01-01

    Full Text Available Lithium-ion batteries (LIBs are secondary rechargeable power sources which increasing production also leads to large amount of waste. In order to environmentally friendly reduce the waste, this work aimed to use acetic acid as a substitute leaching agent to leach Co metals which constitutes about 72.39% wt of the battery cathode. The leaching process was done in a three-necked-flask where calcined LIB cathode powder was mixed with acetic acid solution. The variables of the leaching process under investigation were solution pH, concentration of H2O2 in the solution, S/L ratio, temperature and reaction time. Experimental results showed that only temperature significantly influenced the leaching rate of Co. Since the process was exothermic, the maximum recovery decreased as temperature increased. Conventional shrinking core model that considers diffusion and irreversible surface reaction resistances was found not sufficient to predict the kinetics of the Co leaching with acetic acid. A more representative kinetics model that considers a reversible reaction of Co complex formation needs to be further developed.

  10. Less is more: Avoiding the LIBS dimensionality curse through judicious feature selection for explosive detection

    Science.gov (United States)

    Kumar Myakalwar, Ashwin; Spegazzini, Nicolas; Zhang, Chi; Kumar Anubham, Siva; Dasari, Ramachandra R.; Barman, Ishan; Kumar Gundawar, Manoj

    2015-01-01

    Despite its intrinsic advantages, translation of laser induced breakdown spectroscopy for material identification has been often impeded by the lack of robustness of developed classification models, often due to the presence of spurious correlations. While a number of classifiers exhibiting high discriminatory power have been reported, efforts in establishing the subset of relevant spectral features that enable a fundamental interpretation of the segmentation capability and avoid the ‘curse of dimensionality’ have been lacking. Using LIBS data acquired from a set of secondary explosives, we investigate judicious feature selection approaches and architect two different chemometrics classifiers –based on feature selection through prerequisite knowledge of the sample composition and genetic algorithm, respectively. While the full spectral input results in classification rate of ca.92%, selection of only carbon to hydrogen spectral window results in near identical performance. Importantly, the genetic algorithm-derived classifier shows a statistically significant improvement to ca. 94% accuracy for prospective classification, even though the number of features used is an order of magnitude smaller. Our findings demonstrate the impact of rigorous feature selection in LIBS and also hint at the feasibility of using a discrete filter based detector thereby enabling a cheaper and compact system more amenable to field operations. PMID:26286630

  11. Micro-Laser-Induced Breakdown Spectroscopy (Micro-LIBS) Study on Ancient Roman Mortars.

    Science.gov (United States)

    Pagnotta, Stefano; Lezzerini, Marco; Ripoll-Seguer, Laura; Hidalgo, Montserrat; Grifoni, Emanuela; Legnaioli, Stefano; Lorenzetti, Giulia; Poggialini, Francesco; Palleschi, Vincenzo

    2017-04-01

    The laser-induced breakdown spectroscopy (LIBS) technique was used for analyzing the composition of an ancient Roman mortar (5th century A.D.), exploiting an experimental setup which allows the determination of the compositions of binder and aggregate in few minutes, without the need for sample treatment. Four thousand LIBS spectra were acquired from an area of 10 mm 2 , with a 50 µm lateral resolution. The elements of interest in the mortar sample (H, C, O, Na, Mg, Al, Si, K, Ca, Ti, Mn, Fe) were detected and mapped. The collected data graphically shown as compositional images were interpreted using different statistical approaches for the determination of the chemical composition of the binder and aggregate fraction. The methods of false color imaging, blind separation, and self-organizing maps were applied and their results are discussed in this paper. In particular, the method based on the use of self-organizing maps gives well interpretable results in very short times, without any reduction in the dimensionality of the system.

  12. [Analysis of Cr in soil by LIBS based on conical spatial confinement of plasma].

    Science.gov (United States)

    Lin, Yong-Zeng; Yao, Ming-Yin; Chen, Tian-Bing; Li, Wen-Bing; Zheng, Mei-Lan; Xu, Xue-Hong; Tu, Jian-Ping; Liu, Mu-Hua

    2013-11-01

    The present study is to improve the sensitivity of detection and reduce the limit of detection in detecting heavy metal of soil by laser induced breakdown spectroscopy (LIBS). The Cr element of national standard soil was regarded as the research object. In the experiment, a conical cavity with small diameter end of 20 mm and large diameter end of 45 mm respectively was installed below the focusing lens near the experiment sample to mainly confine the signal transmitted by plasma and to some extent to confine the plasma itself in the LIBS setup. In detecting Cr I 425.44 nm, the beast delay time gained from experiment is 1.3 micros, and the relative standard deviation is below 10%. Compared with the setup of non-spatial confinement, the spectral intensity of Cr in the soil sample was enhanced more than 7%. Calibration curve was established in the Cr concentration range from 60 to 400 microg x g(-1). Under the condition of spatial confinement, the liner regression coefficient and the limit of detection were 0.997 71 and 18.85 microg x g(-1) respectively, however, the regression coefficient and the limit of detection were 0.991 22 and 36.99 microg x g(-1) without spatial confinement. So, this shows that conical spatial confinement can/improve the sensitivity of detection and enhance the spectral intensity. And it is a good auxiliary function in detecting Cr in the soil by laser induced breakdown spectroscopy.

  13. A study of using femtosecond LIBS in analyzing metallic thin film-semiconductor interface

    Science.gov (United States)

    Galmed, A. H.; Kassem, A. K.; von Bergmann, H.; Harith, M. A.

    2011-01-01

    Metals and metal alloys are usually employed as interconnections to guide electrical signals between components into the very large scale integrated (VLSI) devices. These devices demand higher complexity, better performance and lower cost. Thin film is a common geometry for these metallic applications, requiring a substrate for rigidity. Accurate depth profile analysis of coatings is becoming increasingly important with expanding industrial use in technological fields. A number of articles devoted to LIBS applications for depth-resolved analysis have been published in recent years. In the present work, we are studying the ability of femtosecond LIBS to make depth profiling for a Ti thin film of thickness 213 nm deposited onto a silicon (100) substrate before and after thermal annealing. The measurements revealed that an average ablation rates of 15 nm per pulse have been achieved. The thin film was examined using X-Ray Diffraction (XRD) and Atomic Force Microscope (AFM), while the formation of the interface was examined using Rutherford Back Scattering (RBS) before and after annealing. To verify the depth profiling results, a theoretical simulation model is presented that gave a very good agreement with the experimental results.

  14. Determination of calcium to phosphate elemental ratio in natural hydroxypatite using LIBS

    Science.gov (United States)

    Mazalan, Elham; Chaudhary, Kashif; Haider, Zuhaib; Hadi, Siti Fatimah Abd; Ali, Jalil

    2018-05-01

    In this work, laser induced breakdown spectroscopy (LIBS) is employed for determination of calcium to phosphate (Ca/P) ratio in hydroxyapatite (HA) extracted from animal bones. HA was extracted from the biological bones of lamb, bovine, and fish separately. Fresh bones were boiled in deuterium-depleted water (DDW) for 4 hours and immersed it in acetone for 15 hours followed by drying process in the oven. Dried bones were heated at 600 °C and crushed into powder form which was then mixed with potassium bromide (KBr) in a known quantity. The mixture for each sample was palletized into pellets of identical mass using a hydraulic press. The palletized samples of HA extracted from the bones were ablated with 10 ns Q-switched Nd-YAG laser pulses having an energy of 320 mJ/pulse. The optical emissions produced from the laser induced plasma were recorded. Ca and P emission lines are identified and the Ca/P is calculated. Ca/P ratio by LIBS analysis has been verified by EDX measurements and are found in good agreement.

  15. New genera and species of leaf beetles (Coleoptera: Chrysomelidae) from China and South Korea

    Science.gov (United States)

    Two new genera from China (Taumaceroides Lopatin and Yunnaniata Lopatin) and 11 new species (Smaragdina quadrimaculata Lopatin, Smaragdina oblongum Lopatin, Hyphaenia volkovitshi Lopatin, Arthrotus daliensis Lopatin, Taumaceroides sinicus Lopatin, Yunnaniata konstantinovi Lopatin, Calomicrus yunnanu...

  16. Phylogenetic placement of Dapisostemon gen. nov. and Streptostemon, two tropical heterocytous genera (Cyanobacteria)

    Czech Academy of Sciences Publication Activity Database

    Hentschke, G. S.; Johansen, J. R.; Pietrasiak, N.; Fiore, M.F.; Rigonato, J.; Sant’Anna, C. L.; Komárek, Jiří

    2016-01-01

    Roč. 245, č. 2 (2016), s. 129-143 ISSN 1179-3155 Institutional support: RVO:67985939 Keywords : new cyanobacterial genera * phylogeny * tropical habitats Subject RIV: EF - Botanics Impact factor: 1.240, year: 2016

  17. Revision of the orchid genera Chrysoglossum, Collabium, Diglyphosa, and Pilophyllum (subtribe Collabiinae)

    NARCIS (Netherlands)

    Burgh, van der W.; Vogel, de E.F.

    1997-01-01

    This article contains a taxonomic revision of four orchid genera of the subtribe Collabiinae: Chrysoglossum (4 species), Collabium (11 species), Diglyphosa (2 species), and Pilophyllum (1 species). Three species are described as new: Chrysoglossum ensigerum, Collabium acuticalcar and Collabium

  18. Molecular phylogeny of Phoma and allied anamorph genera: towards a reclassification of the Phoma complex

    NARCIS (Netherlands)

    Gruyter, de J.; Aveskamp, M.M.; Woudenberg, J.H.C.; Verkley, G.J.M.; Groenewald, J.Z.; Crous, P.W.

    2009-01-01

    The present generic concept of Phoma is broadly defined, with nine sections being recognised based on morphological characters. Teleomorph states of Phoma have been described in the genera Didymella, Leptosphaeria, Pleospora and Mycosphaerella, indicating that Phoma anamorphs represent a

  19. Effect of self-absorption correction on surface hardness estimation of Fe-Cr-Ni alloys via LIBS.

    Science.gov (United States)

    Ramezanian, Zahra; Darbani, Seyyed Mohammad Reza; Majd, Abdollah Eslami

    2017-08-20

    The effect of self-absorption was investigated on the estimation of surface hardness of Fe-Cr-Ni metallic alloys by the laser-induced breakdown spectroscopy (LIBS) technique. For this purpose, the linear relationship between the ratio of chromium ionic to atomic line intensities (CrII/CrI) and surface hardness was studied, both before and after correcting the self-absorption effect. The correlation coefficient significantly increased from 47% to 90% after self-absorption correction. The results showed the measurements of surface hardness using LIBS can be more accurate and valid by correcting the self-absorption effect.

  20. The 1064 nm laser-induced breakdown spectroscopy (LIBS) inspection to detect the nutrient elements in freshly cut carrot samples

    Science.gov (United States)

    Yudasari, N.; Prasetyo, S.; Suliyanti, M. M.

    2018-03-01

    The laser-induced breakdown spectroscopy (LIBS) technique was applied to detect the nutrient elements contained in fresh carrot. Nd:YAG laser the wavelength of 1064 nm was employed in the experiments for ablation. Employing simple set-up of LIBS and preparing the sample with less step method, we are able to detect 18 chemical elements including some fundamental element of carrot, i.e Mg, Al, Fe, Mn, Ti, Ca, and Mn. By applying normalized profiles calculation on some of the element, we are able to compare the concentration level of each element of the outer and inner part of carrot.

  1. Seagrass Ecosystem Services and Their Variability across Genera and Geographical Regions.

    Science.gov (United States)

    Mtwana Nordlund, Lina; Koch, Evamaria W; Barbier, Edward B; Creed, Joel C

    2016-01-01

    Threats to and loss of seagrass ecosystems globally, impact not only natural resources but also the lives of people who directly or indirectly depend on these systems. Seagrass ecosystems play a multi-functional role in human well-being, e.g. food through fisheries, control of erosion and protection against floods. Quantifying these services reveals their contributions to human well-being and helps justify seagrass conservation. There has been no comprehensive assessment as to whether seagrass ecosystem services are perceived to vary over the globe or amongst genera. Our study compiles the most complete list of ecosystem services provided by seagrasses so far, including bioregional- and genus-specific information from expert opinion and published studies. Several seagrass ecosystem services vary considerably in their (known) provision across genera and over the globe. Seagrasses genera are clearly not all equal with regard to the ecosystem services they provide. As seagrass genera are not evenly distributed over all bioregions, the presence of an ecosystem service sometimes depends on the genera present. Larger sized seagrass genera (e.g. Posidonia, Enhalus) are perceived to provide more substantial and a wider variety of ecosystem services than smaller species (e.g. Halophila, Lepilaena). Nevertheless, smaller species provide important services. Our findings point out data gaps, provide new insight for more efficient management and recommend caution in economic valuation of seagrass services worldwide.

  2. Mid-infrared, long wave infrared (4-12 μm) molecular emission signatures from pharmaceuticals using laser-induced breakdown spectroscopy (LIBS).

    Science.gov (United States)

    Yang, Clayton S-C; Brown, Ei E; Kumi-Barimah, Eric; Hommerich, Uwe H; Jin, Feng; Trivedi, Sudhir B; Samuels, Alan C; Snyder, A Peter

    2014-01-01

    In an effort to augment the atomic emission spectra of conventional laser-induced breakdown spectroscopy (LIBS) and to provide an increase in selectivity, mid-wave to long-wave infrared (IR), LIBS studies were performed on several organic pharmaceuticals. Laser-induced breakdown spectroscopy signature molecular emissions of target organic compounds are observed for the first time in the IR fingerprint spectral region between 4-12 μm. The IR emission spectra of select organic pharmaceuticals closely correlate with their respective standard Fourier transform infrared spectra. Intact and/or fragment sample molecular species evidently survive the LIBS event. The combination of atomic emission signatures derived from conventional ultraviolet-visible-near-infrared LIBS with fingerprints of intact molecular entities determined from IR LIBS promises to be a powerful tool for chemical detection.

  3. Standoff Laser-Induced Breakdown Spectroscopy (LIBS) Using a Miniature Wide Field of View Spatial Heterodyne Spectrometer with Sub-Microsteradian Collection Optics.

    Science.gov (United States)

    Barnett, Patrick D; Lamsal, Nirmal; Angel, S Michael

    2017-04-01

    A spatial heterodyne spectrometer (SHS) is described for standoff laser-induced breakdown spectroscopy (LIBS) measurements. The spatial heterodyne LIBS spectrometer (SHLS) is a diffraction grating based interferometer with no moving parts that offers a very large field of view, high light throughput, and high spectral resolution in a small package. The field of view of the SHLS spectrometer is shown to be ∼1° in standoff LIBS measurements. In the SHLS system described here, the collection aperture was defined by the 10 mm diffraction gratings in the SHS and standoff LIBS measurements were made up to 20 m with no additional collection optics, corresponding to a collection solid angle of 0.2 μsr, or f/2000, and also using a small telescope to increase the collection efficiency. The use of a microphone was demonstrated to rapidly optimize laser focus for 20 m standoff LIBS measurements.

  4. Characterization of laser-induced breakdown spectroscopy (LIBS) for application to space exploration

    Energy Technology Data Exchange (ETDEWEB)

    Knight, Andrew K. [Group CST-1, MS J565, Chemical Science and Technology Division, Los Alamos National Laboratory, Los Alamos, New Mexico 87545 (United States); Scherbarth, Nancy L. [Group CST-1, MS J565, Chemical Science and Technology Division, Los Alamos National Laboratory, Los Alamos, New Mexico 87545 (United States); Cremers, David A. [Group CST-1, MS J565, Chemical Science and Technology Division, Los Alamos National Laboratory, Los Alamos, New Mexico 87545 (United States); Ferris, Monty J. [Group CST-1, MS J565, Chemical Science and Technology Division, Los Alamos National Laboratory, Los Alamos, New Mexico 87545 (United States)

    2000-03-01

    Early in the next century, several space missions are planned with the goal of landing craft on asteroids, comets, the Moon, and Mars. To increase the scientific return of these missions, new methods are needed to provide (1) significantly more analyses per mission lifetime, and (2) expanded analytical capabilities. One method that has the potential to meet both of these needs for the elemental analysis of geological samples is laser-induced breakdown spectroscopy (LIBS). These capabilities are possible because the laser plasma provides rapid analysis and the laser pulse can be focused on a remotely located sample to perform a stand-off measurement. Stand-off is defined as a distance up to 20 m between the target and laser. Here we present the results of a characterization of LIBS for the stand-off analysis of soils at reduced air pressures and in a simulated Martian atmosphere (5-7 torr pressure of CO{sub 2}) showing the feasibility of LIBS for space exploration. For example, it is demonstrated that an analytically useful laser plasma can be generated at distances up to 19 m by using only 35 mJ/pulse from a compact laser. Some characteristics of the laser plasma at reduced pressure were also investigated. Temporally and spectrally resolved imaging showed significant changes in the plasma as the pressure was reduced and also showed that the analyte signals and mass ablated from a target were strongly dependent on pressure. As the pressure decreased from 590 torr to the 40-100 torr range, the signals increased by a factor of about 3-4, and as the pressure was further reduced the signals decreased. This behavior can be explained by pressure-dependent changes in the mass of material vaporized and the frequency of collisions between species in the plasma. Changes in the temperature and the electron density of the plasmas with pressure were also examined and detection limits for selected elements were determined. (c) 2000 Society for Applied Spectroscopy.

  5. Characterization of laser-induced breakdown spectroscopy (LIBS) for application to space exploration

    International Nuclear Information System (INIS)

    Knight, Andrew K.; Scherbarth, Nancy L.; Cremers, David A.; Ferris, Monty J.

    2000-01-01

    Early in the next century, several space missions are planned with the goal of landing craft on asteroids, comets, the Moon, and Mars. To increase the scientific return of these missions, new methods are needed to provide (1) significantly more analyses per mission lifetime, and (2) expanded analytical capabilities. One method that has the potential to meet both of these needs for the elemental analysis of geological samples is laser-induced breakdown spectroscopy (LIBS). These capabilities are possible because the laser plasma provides rapid analysis and the laser pulse can be focused on a remotely located sample to perform a stand-off measurement. Stand-off is defined as a distance up to 20 m between the target and laser. Here we present the results of a characterization of LIBS for the stand-off analysis of soils at reduced air pressures and in a simulated Martian atmosphere (5-7 torr pressure of CO 2 ) showing the feasibility of LIBS for space exploration. For example, it is demonstrated that an analytically useful laser plasma can be generated at distances up to 19 m by using only 35 mJ/pulse from a compact laser. Some characteristics of the laser plasma at reduced pressure were also investigated. Temporally and spectrally resolved imaging showed significant changes in the plasma as the pressure was reduced and also showed that the analyte signals and mass ablated from a target were strongly dependent on pressure. As the pressure decreased from 590 torr to the 40-100 torr range, the signals increased by a factor of about 3-4, and as the pressure was further reduced the signals decreased. This behavior can be explained by pressure-dependent changes in the mass of material vaporized and the frequency of collisions between species in the plasma. Changes in the temperature and the electron density of the plasmas with pressure were also examined and detection limits for selected elements were determined. (c) 2000 Society for Applied Spectroscopy

  6. In situ NIR reflectance and LIBS measurements in lava tubes in preparation for future Mars missions

    Science.gov (United States)

    Leveille, R.; Sobron, P.

    2017-12-01

    The ATiLT (Astrobiology Training in Lava Tubes) program addresses Mars astrobiology exploration objectives by performing field work and instrumental analyses in lava tubes as high fidelity analog environments to putative lava tubes on Mars. The main field location for ATiLT is the Lava Beds National Monument (LABE) in Northern California. LABE is situated on the lower north flank of the Medicine Lake Volcano of the Cascade arc. This location features hundreds of caves, most of which are relatively shallow, typically well above the water table, reaching 20-45m below land surface at their maximum depth. Some LABE caves feature `cold sinks' where cold air sinks and becomes trapped in deeper cave passages, thus allowing perennial ice to accumulate despite above freezing surface temperatures. Several lava tube caves in LABE also contain seasonal or perennial ice accumulations, which makes them excellent analogs to Mars lava tubes where the presence of ice has been predicted. While lava tubes are very attractive systems to test hypotheses related to habitability and the possibility for life on Mars, at present there are no comprehensive in-situ instrument-driven characterizations of the mineralogy and geochemistry of lava tubes. ATiLT fills this gap by providing detailed, in-situ investigations with scientific instruments relevant to Mars exploration. Our aim is to help constrain future exploration targets on Mars and define future mission operations and requirements. For this purpose, in May 2017 we carried out a field campaign in several lava tubes at LABE. We deployed two miniature spectroscopic sensors suitable for dark, humid, cave conditions: NIR reflectance (1-5 μm) and LIBS (300-900 nm). The advantages of combining NIR reflectance and LIBS are evident: LIBS can reveal the relative concentration of major (and often trace) elements present in a bulk sample, whereas NIR reflectance yields information on the individual mineral species and their chemical and

  7. Evaluation of laser-induced breakdown spectroscopy (LIBS) for measurement of silica on filter samples of coal dust.

    Science.gov (United States)

    Stipe, Christopher B; Miller, Arthur L; Brown, Jonathan; Guevara, Edward; Cauda, Emanuele

    2012-11-01

    Airborne silica dust (quartz) is common in coal mines and represents a respiratory hazard that can lead to silicosis, a potentially fatal lung disease. With an eye toward developing a portable monitoring device for rapid analysis of silica dust, laser-induced breakdown spectroscopy (LIBS) was used to quantify quartz in coal dust samples collected on filter media. Pure silica (Min-U-Sil™ 5), Georgia kaolin, and Pittsburgh-4 and Illinois-6 coal dusts were deposited separately and at multiple mass loadings onto 37-mm polyvinylchloride (PVC) filters. LIBS-generated silicon emission was monitored at 288.16 nm, and non-silica contributions to that signal from kaolinite were removed by simultaneously detecting aluminum. Measurements of the four samples were used to calculate limits of detection (LOD) for silicon and aluminum of approximately 0.08 μg/cm(2) and 0.05 μg/cm(2), respectively (corresponding to 0.16 μg/cm(2) and 0.20 μg/cm(2) for silica and kaolinite, respectively). Relative errors of prediction are around 10%. Results demonstrate that LIBS can dependably quantify silica on filter samples of coal dust and confirm that accurate quantification can be achieved for very lightly loaded samples, which supports the potential application of LIBS for rapid, in-field monitoring.

  8. Characterizing the economic value of an epithermal Au-Ag ore with Laser Induced Breakdown Spectroscopy (LIBS)

    NARCIS (Netherlands)

    Dalm, M.; Buxton, M.W.N.

    2016-01-01

    LIBS was applied to 19 Au-Ag ore samples to investigate if this technique can be used to distinguish between economic and sub-economic ore either by direct detection of these elements or by using other elements as indicators. However, the Au and Ag grades of the samples are below the detection limit

  9. Remote quantitative analysis of minerals based on multispectral line-calibrated laser-induced breakdown spectroscopy (LIBS).

    Science.gov (United States)

    Wan, Xiong; Wang, Peng

    2014-01-01

    Laser-induced breakdown spectroscopy (LIBS) is a feasible remote sensing technique used for mineral analysis in some unapproachable places where in situ probing is needed, such as analysis of radioactive elements in a nuclear leak or the detection of elemental compositions and contents of minerals on planetary and lunar surfaces. Here a compact custom 15 m focus optical component, combining a six times beam expander with a telescope, has been built, with which the laser beam of a 1064 nm Nd ; YAG laser is focused on remote minerals. The excited LIBS signals that reveal the elemental compositions of minerals are collected by another compact single lens-based signal acquisition system. In our remote LIBS investigations, the LIBS spectra of an unknown ore have been detected, from which the metal compositions are obtained. In addition, a multi-spectral line calibration (MSLC) method is proposed for the quantitative analysis of elements. The feasibility of the MSLC and its superiority over a single-wavelength determination have been confirmed by comparison with traditional chemical analysis of the copper content in the ore.

  10. Detection of pesticides and dioxins in tissue fats and rendering oils using laser-induced breakdown spectroscopy (LIBS).

    Science.gov (United States)

    Multari, Rosalie A; Cremers, David A; Scott, Thomas; Kendrick, Peter

    2013-03-13

    In laser-induced breakdown spectroscopy (LIBS), a series of powerful laser pulses are directed at a surface to form microplasmas from which light is collected and spectrally analyzed to identify the surface material. In most cases, no sample preparation is needed, and results can be automated and made available within seconds to minutes. Advances in LIBS spectral data analysis using multivariate regression techniques have led to the ability to detect organic chemicals in complex matrices such as foods. Here, the use of LIBS to differentiate samples contaminated with aldrin, 1,2,3,4,6,7,8-heptachlorodibenzo-p-dioxin, chlorpyrifos, and dieldrin in the complex matrices of tissue fats and rendering oils is described. The pesticide concentrations in the samples ranged from 0.005 to 0.1 μg/g. All samples were successfully differentiated from each other and from control samples. Sample concentrations could also be differentiated for all of the pesticides and the dioxin included in this study. The results presented here provide first proof-of-principle data for the ability to create LIBS-based instrumentation for the rapid analysis of pesticide and dioxin contamination in tissue fat and rendered oils.

  11. Laser-induced breakdown spectroscopy (LIBS) to measure quantitatively soil carbon with emphasis on soil organic carbon. A review.

    Science.gov (United States)

    Senesi, Giorgio S; Senesi, Nicola

    2016-09-28

    Soil organic carbon (OC) measurement is a crucial factor for quantifying soil C pools and inventories and monitoring the inherent temporal and spatial heterogeneity and changes of soil OC content. These are relevant issues in addressing sustainable management of terrestrial OC aiming to enhance C sequestration in soil, thus mitigating the impact of increasing CO2 concentration in the atmosphere and related effects on global climate change. Nowadays, dry combustion by an elemental analyzer or wet combustion by dichromate oxidation of the soil sample are the most recommended and commonly used methods for quantitative soil OC determination. However, the unanimously recognized uncertainties and limitations of these classical laboursome methods have prompted research efforts focusing on the development and application of more advanced and appealing techniques and methods for the measurement of soil OC in the laboratory and possibly in situ in the field. Among these laser-induced breakdown spectroscopy (LIBS) has raised the highest interest for its unique advantages. After an introduction and a highlight of the LIBS basic principles, instrumentation, methodologies and supporting chemometric methods, the main body of this review provides an historical and critical overview of the developments and results obtained up-to-now by the application of LIBS to the quantitative measurement of soil C and especially OC content. A brief critical summary of LIBS advantages and limitations/drawbacks including some final remarks and future perspectives concludes this review. Copyright © 2016 Elsevier B.V. All rights reserved.

  12. A Simple Laser Induced Breakdown Spectroscopy (LIBS) System for Use at Multiple Levels in the Undergraduate Chemistry Curriculum

    Science.gov (United States)

    Randall, David W.; Hayes, Ryan T.; Wong, Peter A.

    2013-01-01

    A LIBS (laser induced breakdown spectroscopy) spectrometer constructed by the instructor is reported for use in undergraduate analytical chemistry experiments. The modular spectrometer described here is based on commonly available components including a commercial Nd:YAG laser and a compact UV-vis spectrometer. The modular approach provides a…

  13. Satiation deficits and binge eating: Probing differences between bulimia nervosa and purging disorder using an ad lib test meal.

    Science.gov (United States)

    Keel, Pamela K; Haedt-Matt, Alissa A; Hildebrandt, Britny; Bodell, Lindsay P; Wolfe, Barbara E; Jimerson, David C

    2018-04-11

    Purging disorder (PD) has been included as a named condition within the DSM-5 category of Other Specified Feeding or Eating Disorder and differs from bulimia nervosa (BN) in the absence of binge-eating episodes. The current study evaluated satiation through behavioral and self-report measures to understand how this construct may explain distinct symptom presentations for bulimia nervosa (BN) and purging disorder (PD). Women (N = 119) were recruited from the community if they met DSM-5 criteria for BN (n = 57), PD (n = 31), or were free of eating pathology (n = 31 controls). Participants completed structured clinical interviews and questionnaires and an ad lib test meal during which they provided reports of subjective states. Significant group differences were found on self-reported symptoms, ad lib test meal intake, and subjective responses to food intake between individuals with eating disorders and controls and between BN and PD. Further, ad lib intake was associated with self-reported frequency and size of binge episodes. In a multivariable model, the amount of food consumed during binges as reported during clinical interviews predicted amount of food consumed during the ad lib test meal, controlling for other binge-related variables. Satiation deficits distinguish BN from PD and appear to be specifically linked to the size of binge episodes. Future work should expand exploration of physiological bases of these differences to contribute to novel interventions. Copyright © 2018 Elsevier Ltd. All rights reserved.

  14. Adding Bite to the Bark: Using LibGuides2 Migration as Impetus to Introduce Strong Content Standards

    Science.gov (United States)

    Fritch, Melia; Pitts, Joelle E.

    2016-01-01

    The authors discuss the long-term accumulation of unstandardized and inaccessible content within the Libguides system and the decision-making process to create and implement a set of standards using the migration to the LibGuides2 platform as a vehicle for change. Included in the discussion are strategies for the creation of standards and…

  15. Partial Least Squares and Neural Networks for Quantitative Calibration of Laser-induced Breakdown Spectroscopy (LIBs) of Geologic Samples

    Science.gov (United States)

    Anderson, R. B.; Morris, Richard V.; Clegg, S. M.; Humphries, S. D.; Wiens, R. C.; Bell, J. F., III; Mertzman, S. A.

    2010-01-01

    The ChemCam instrument [1] on the Mars Science Laboratory (MSL) rover will be used to obtain the chemical composition of surface targets within 7 m of the rover using Laser Induced Breakdown Spectroscopy (LIBS). ChemCam analyzes atomic emission spectra (240-800 nm) from a plasma created by a pulsed Nd:KGW 1067 nm laser. The LIBS spectra can be used in a semiquantitative way to rapidly classify targets (e.g., basalt, andesite, carbonate, sulfate, etc.) and in a quantitative way to estimate their major and minor element chemical compositions. Quantitative chemical analysis from LIBS spectra is complicated by a number of factors, including chemical matrix effects [2]. Recent work has shown promising results using multivariate techniques such as partial least squares (PLS) regression and artificial neural networks (ANN) to predict elemental abundances in samples [e.g. 2-6]. To develop, refine, and evaluate analysis schemes for LIBS spectra of geologic materials, we collected spectra of a diverse set of well-characterized natural geologic samples and are comparing the predictive abilities of PLS, cascade correlation ANN (CC-ANN) and multilayer perceptron ANN (MLP-ANN) analysis procedures.

  16. Determination of the penetration hardness and analysis of stainless steel alloys by means of Laser Induced Breakdown Spectroscopy (LIBS

    Directory of Open Access Journals (Sweden)

    mohamad Vahid Dastjerdi

    2017-11-01

    Full Text Available A significant feature of alloys is the surfaces hardness that is always accompanied by challenges when it’s measured by common mechanical techniques. In this investigation, we used Laser Induced Breakdown Spectroscopy (LIBS as a replacement method for common mechanical techniques to measure the surfaces hardness of different alloys. After recording the spectrum of alloy samples in order to identify the surface hardness of analyzed sample, K-Nearest Neighbors method (KNN was used and obtained results showed that the LIBS-KNN method can separate and identify the surfaces hardness of samples with precision of 93.3%. In addition, in order to identify the percentage of constituent elements of alloys and their hardness, calibration approach was investigated that showed there is an appropriate linear relation between recorded emission lines from the LIB spectra of sample alloys and the percentage of their constituent elements and also their Vickers hardness numbers. Therefore, According to exclusive advantages of LIBS technique i.e. high speed analysis, non-destructive analysis and being portable, some of available difficulties in conventional mechanical techniques can be removed.

  17. L'institutionnalisation des délibérations dans l'espace public au sein ...

    African Journals Online (AJOL)

    seriane.camara

    16 sept. 2010 ... prise de décision occuperont une place importante dans cette étude, l'accent sera surtout mis sur le processus par lequel la délibération dans l' ...... autorités traditionnelles mettent en œuvre pour essayer de faire face aux.

  18. Improving Library Service Quality to Graduate Students: LibQual+[TM] Survey Results in a Practical Setting

    Science.gov (United States)

    Jankowska, Maria Anna; Hertel, Karen; Young, Nancy J.

    2006-01-01

    The LibQUAL+[TM] survey was conducted to determine user satisfaction and expectations concerning library service quality. The results of the "22 items and a box" constituted a rich source of information for the University of Idaho (UI) Library's strategic planning process. Focusing on graduate students, this study used three…

  19. Scintillation characteristics of LiB3O5 and β-BaB2O4 single crystals

    International Nuclear Information System (INIS)

    Nazarenko, B.P.; Pedash, V.Yu.; Shekhovtsov, A.N.; Tarasov, V.A.; Zelenskaya, O.V.

    2006-01-01

    LiB 3 O 5 and β-BaB 2 O 4 single crystals have been grown by the top seeded solution growth technique. The optical characteristics and scintillation parameters of the grown single crystals have been tested and discussed

  20. Optimal conditions for taking spectra of coffee beans plasma spectroscopy induced by laser (LIBS)

    International Nuclear Information System (INIS)

    Diaz Guerrero, A. M.; Flores Reyes; Ponce Cabrera, L. V.

    2016-01-01

    Coffee beans, arabica and robusta, from Mexico (Chiapas and Veracruz), Colombia, Kenya and Sumatra were analyzed by Laser-induced breakdown spectroscopy (LIBS). The time delay and pulse energy were varied in order to find the optimal conditions for taking spectra in coffee beans; finding that the increased visibility of the peaks and the lowest electronic background is observed with 1 s and 450 mJ. Spectra were taken in different regions of grain area to confirm its homogeneous composition. It was found that the intensity of the signal Ca is much higher than that of K in African coffee, lower in the coffee of America, and much lower in the coffee from Asia. (Author)

  1. LIBS detection of heavy metal elements in liquid solutions by using wood pellet as sample matrix

    International Nuclear Information System (INIS)

    Wen Guanhong; Sun Duixiong; Su Maogen; Dong Chenzhong

    2013-01-01

    Laser-induced breakdown spectroscopy (LIBS) has been applied to the analysis of heavy metals in liquid sample. A new approach was presented to improve the detection limit and minimize the sample matrix effects, in which dried wood pellets absorbed the given amounts of Cr standard solutions and then were baked because they have stronger and rapid absorption properties for liquid samples as well as simple elemental compositions. In this work, we have taken a typical heavy metal Cr element as an example, and investigated the spectral feasibility of Cr solutions and dried wood pellets before and after absorbing Cr solutions at the same experimental conditions, respectively. The results were demonstrated to successfully produce a superior analytical response for heavy metal elements by using wood pellet as sample matrix according to obtained LOD of 0.07 ppm for Cr element in solutions. (author)

  2. Estimation of Soil Nitrate (NO3) Level Using Laser-Induced Breakdown Spectroscopy (LIBS)

    Science.gov (United States)

    Angkat, A. R.; Seminar, K. B.; Rahmat, M.; Sutandi, A.

    2018-05-01

    Laser-Induced Breakdown Spectroscopy (LIBS) is a method for measuring level of nitrogen (N) in the soil in the form of N-nitrate (NO3) rapidly without going through the process of sieving and drying. The sample soil in the form of pellets subjected to laser pulses using a wavelength of 532 nm, pulse duration 5.5 ns, repetition rate of 10 Hz, and Q-switch delay of 150 μs. Emissions are captured by the spectrometer with the wavelength range of 190-1130 nm. Spectrum characterization was processed through the second derivative in order to obtain a wavelength identity that could be rapidly used to estimate the nitrate content of the soil with a determination coefficient of (R2) 0.9254 and a coefficient of variation (CV) of 8.41%. The results of this study are very potential to be applied for rapid measurement of soil nitrate.

  3. Ultrafast Laser-Based Spectroscopy and Sensing: Applications in LIBS, CARS, and THz Spectroscopy

    Science.gov (United States)

    Leahy-Hoppa, Megan R.; Miragliotta, Joseph; Osiander, Robert; Burnett, Jennifer; Dikmelik, Yamac; McEnnis, Caroline; Spicer, James B.

    2010-01-01

    Ultrafast pulsed lasers find application in a range of spectroscopy and sensing techniques including laser induced breakdown spectroscopy (LIBS), coherent Raman spectroscopy, and terahertz (THz) spectroscopy. Whether based on absorption or emission processes, the characteristics of these techniques are heavily influenced by the use of ultrafast pulses in the signal generation process. Depending on the energy of the pulses used, the essential laser interaction process can primarily involve lattice vibrations, molecular rotations, or a combination of excited states produced by laser heating. While some of these techniques are currently confined to sensing at close ranges, others can be implemented for remote spectroscopic sensing owing principally to the laser pulse duration. We present a review of ultrafast laser-based spectroscopy techniques and discuss the use of these techniques to current and potential chemical and environmental sensing applications. PMID:22399883

  4. Double Pulse LIBS of Titanium-Based PVD-Coatings with Submicron Resolution

    Directory of Open Access Journals (Sweden)

    K. Ermalitskaia

    2016-01-01

    Full Text Available The possibility for double pulse LIBS in the process of a direct layer-by-layer analysis of the titanium-based PVD-coatings on polished flat blank samples of steel and silicon and also of the TiAlN/TiN-coating on a milling cutter is considered. A method is proposed to control thickness of the radiation evaporated layer by defocusing the laser beam with respect to the surface, making it possible to attain the depth resolution of 0.1 μm. The Ti and Ti-Zr-coatings produced using the ion-assisted condensation method and subjected to streams of the nitrogen plasma in a magnetic-plasma compressor are studied.

  5. Design and Construction of a pulsed Nd:YAG laser for LIBS applications

    Science.gov (United States)

    Garcia-Villarreal, A.; Sobral, H.

    2015-01-01

    A multi-pulse Nd:YAG laser was designed and built, that can be used as an excitation source for Laser Induced Breakdown Spectroscopy (LIBS) experiments. A trigger and a power supply for the flash lamp has been successfully developed. A cooling system that uses a distilled water flow for the active medium was implemented. The laser has an output energy of 306 ± 7 mJ for 1 Hz repetition rate and its temporal profile is multi-pulse with 1 ps of average separation between them. To validate the system, the output was used as an ablation source of an aluminum target and the emission was investigated by spectroscopy analysis.

  6. Ultrafast Laser-Based Spectroscopy and Sensing: Applications in LIBS, CARS, and THz Spectroscopy

    Directory of Open Access Journals (Sweden)

    Megan R. Leahy-Hoppa

    2010-04-01

    Full Text Available Ultrafast pulsed lasers find application in a range of spectroscopy and sensing techniques including laser induced breakdown spectroscopy (LIBS, coherent Raman spectroscopy, and terahertz (THz spectroscopy. Whether based on absorption or emission processes, the characteristics of these techniques are heavily influenced by the use of ultrafast pulses in the signal generation process. Depending on the energy of the pulses used, the essential laser interaction process can primarily involve lattice vibrations, molecular rotations, or a combination of excited states produced by laser heating. While some of these techniques are currently confined to sensing at close ranges, others can be implemented for remote spectroscopic sensing owing principally to the laser pulse duration. We present a review of ultrafast laser-based spectroscopy techniques and discuss the use of these techniques to current and potential chemical and environmental sensing applications.

  7. Vote for your favorite tourist attraction on "Le Dauphiné Libéré"

    CERN Multimedia

    2015-01-01

    Dear colleagues, During the summer, the French regional daily newspaper Le Dauphiné Libéré has been inviting its readers to vote for their favourite tourist attraction (natural or otherwise) in the Bellegarde area and the Pays de Gex, and CERN is one of the nominees. This is a great opportunity for us to communicate directly with people living in the region, particularly those who have not yet had the chance to visit CERN, and who, thanks to this survey, might be curious to learn more about the Laboratory and pay us a visit. Remember, visits to CERN are free of charge all year round! We invite you to vote for CERN by clicking on this link: http://www.ledauphine.com/ain/2015/07/10/votez-pur-votre-site-prefere-dans-le-bassin-bellegardien-et-le-pays-de-gex. We’re counting on your votes! CERN Local Communication team

  8. Digital content sewed together within a library catalogue WebLib - The CERN Document Server

    CERN Document Server

    Vigen, Jens

    2002-01-01

    Aggregation, harvesting, personalization techniques, portals, service provision, etc. have all become buzzwords. Most of them simply describing what librarians have been doing for hundreds of years. Prior to the Web few people outside the libraries were concerned about these issues, a situation which today it is completely turned upside down. Hopefully the new actors on the arena of knowledge management will take full advantage of all the available "savoir faire". At CERN, the European Organization for Nuclear Research, librarians and informaticians have set up a complete system, WebLib, actually based on the traditional library catalogue. Digital content is, within this framework, being integrated to the highest possible level in order to meet the strong requirements of the particle physics community. The paper gives an overview of the steps CERN has made towards the digital library from the day the laboratory conceived the World Wide Web to present.

  9. LIBS Detection of Heavy Metal Elements in Liquid Solutions by Using Wood Pellet as Sample Matrix

    International Nuclear Information System (INIS)

    Wen Guanhong; Sun Duixiong; Su Maogen; Dong Chenzhong

    2014-01-01

    Laser-induced breakdown spectroscopy (LIBS) has been applied to the analysis of heavy metals in liquid samples. A new approach was presented to lower the limit of detection (LOD) and minimize the sample matrix effects, in which dried wood pellets absorbed the given amounts of Cr standard solutions and then were baked because they have stronger and rapid absorption properties for liquid samples as well as simple elemental compositions. In this work, we have taken a typical heavy metal Cr element as an example, and investigated the spectral feasibility of Cr solutions and dried wood pellets before and after absorbing Cr solutions at the same experimental conditions. The results were demonstrated to successfully produce a superior analytical response for heavy metal elements by using wood pellet as sample matrix according to the obtained LOD of 0.07 ppm for Cr element in solutions

  10. Software support for SBGN maps: SBGN-ML and LibSBGN.

    Science.gov (United States)

    van Iersel, Martijn P; Villéger, Alice C; Czauderna, Tobias; Boyd, Sarah E; Bergmann, Frank T; Luna, Augustin; Demir, Emek; Sorokin, Anatoly; Dogrusoz, Ugur; Matsuoka, Yukiko; Funahashi, Akira; Aladjem, Mirit I; Mi, Huaiyu; Moodie, Stuart L; Kitano, Hiroaki; Le Novère, Nicolas; Schreiber, Falk

    2012-08-01

    LibSBGN is a software library for reading, writing and manipulating Systems Biology Graphical Notation (SBGN) maps stored using the recently developed SBGN-ML file format. The library (available in C++ and Java) makes it easy for developers to add SBGN support to their tools, whereas the file format facilitates the exchange of maps between compatible software applications. The library also supports validation of maps, which simplifies the task of ensuring compliance with the detailed SBGN specifications. With this effort we hope to increase the adoption of SBGN in bioinformatics tools, ultimately enabling more researchers to visualize biological knowledge in a precise and unambiguous manner. Milestone 2 was released in December 2011. Source code, example files and binaries are freely available under the terms of either the LGPL v2.1+ or Apache v2.0 open source licenses from http://libsbgn.sourceforge.net. sbgn-libsbgn@lists.sourceforge.net.

  11. Enhancing the Performance of LibSVM Classifier by Kernel F-Score Feature Selection

    Science.gov (United States)

    Sarojini, Balakrishnan; Ramaraj, Narayanasamy; Nickolas, Savarimuthu

    Medical Data mining is the search for relationships and patterns within the medical datasets that could provide useful knowledge for effective clinical decisions. The inclusion of irrelevant, redundant and noisy features in the process model results in poor predictive accuracy. Much research work in data mining has gone into improving the predictive accuracy of the classifiers by applying the techniques of feature selection. Feature selection in medical data mining is appreciable as the diagnosis of the disease could be done in this patient-care activity with minimum number of significant features. The objective of this work is to show that selecting the more significant features would improve the performance of the classifier. We empirically evaluate the classification effectiveness of LibSVM classifier on the reduced feature subset of diabetes dataset. The evaluations suggest that the feature subset selected improves the predictive accuracy of the classifier and reduce false negatives and false positives.

  12. Libérer le double, la beauté sera convulsive…

    OpenAIRE

    Beauvoir-Dominique, Rachel

    2008-01-01

    Rachel Beauvoir-Dominique, Libérer le double, la beauté sera convulsive... À propos d’une collection d’art vodou. — De 1980 à ce jour, grâce au dévouement de Madame Marianne Lehmann, une collection unique de trésors du répertoire plastique vodou et « Makaya » a été rassemblée. Dotée de plusieurs milliers d’objets de culte, cette impressionnante collection n’a pas encore été exposée publiquement de manière permanente ; elle a cependant déjà attiré l’attention de nombreuses institutions nationa...

  13. LibCPIXE: A PIXE simulation open-source library for multilayered samples

    International Nuclear Information System (INIS)

    Pascual-Izarra, C.; Barradas, N.P.; Reis, M.A.

    2006-01-01

    Most particle induced X-ray emission (PIXE) data analysis codes are not focused on handling multilayered samples. We have developed an open-source library called 'LibCPIXE', for PIXE data analysis. It is written in standard C and implements functions for simulating X-ray yields of PIXE spectra taken from arbitrary samples, including multilayered targets. The library is designed to be fast, portable, modular and scalable, as well as to facilitate its incorporation into any existing program. In order to demonstrate the capabilities of the library, a program called CPIXE was developed and used to analyze various real samples involving both bulk and layered samples. Just as the library, the CPIXE source code is freely available under the General Public License. We demonstrate that it runs both under GNU/Linux systems as well as under MS Windows. There is in principle no limitation to port it to other platforms

  14. User library service expectations in health science vs. other settings: a LibQUAL+ Study.

    Science.gov (United States)

    Thompson, Bruce; Kyrillidou, Martha; Cook, Colleen

    2007-12-01

    To explore how the library service expectations and perceptions of users might differ across health-related libraries as against major research libraries not operating in a medical context; to determine whether users of medical libraries demand better library service quality, because the inability of users to access needed literature promptly may lead to a patient who cannot be properly diagnosed, or a diagnosis that cannot be properly treated. We compared LibQUAL+ total and subscale scores across three groups of US, Canadian and British libraries for this purpose. Anticipated differences in expectations for health as other library settings did not emerge. The expectations and perceptions are similar across different types of health science library settings, hospital and academic, and across other general research libraries.

  15. Pour une anthropologie de la libération For an Anthropology of the Liberation

    Directory of Open Access Journals (Sweden)

    Michael Singleton

    2011-09-01

    Full Text Available Foncièrement constructiviste, l’Anthropologie elle-même (à supposer, dato non concesso, que le singulier substantiel soit de mise n’est pas moins le “fait” d’une culture à l’exclusion, en dernière analyse, de toute autre. Néanmoins, produit en surface, mais processus en profondeur, bien que née et grandie dans un certain Occident, rien ne l’empêche d’inventer une identité inédite. D’où l’émergence à l’Université Catholique de Louvain d’une Anthropologie Prospective dont l’intentionnalité identitaire, impliquée jusqu’à l’indignation, rend libératrice. La Culture l’abhorrant autant sinon plus que la Nature, le vide laissé par la théologie de la libération, morte avec Dieu lui-même, pourrait être rempli par son pendant anthropo-logique.Fundamentally constructivist, Anthropology itself (supposing, but “dato non concesso”, that such a substantial singularity exists is no less the “fact” of one culture to the exclusion, in the last analysis, of all others.  However, seemingly a product but basically a process, though born and bred in the West, there is nothing to prevent anthropology from reinventing its identity.  Hence the emergence in the Catholic University of Louvain, of a Prospective Anthropology whose committed and at times indignant intentionality makes for freedom. Culture abhorring it as much if not more than Nature, the vacuum left by the demise of liberation theology subsequent to the Death of God himself, could be filled by an anthropo-logical equivalent.

  16. Calibration-free quantitative analysis of elemental ratios in intermetallic nanoalloys and nanocomposites using Laser Induced Breakdown Spectroscopy (LIBS).

    Science.gov (United States)

    Davari, Seyyed Ali; Hu, Sheng; Mukherjee, Dibyendu

    2017-03-01

    Intermetallic nanoalloys (NAs) and nanocomposites (NCs) have increasingly gained prominence as efficient catalytic materials in electrochemical energy conversion and storage systems. But their morphology and chemical compositions play critical role in tuning their catalytic activities, and precious metal contents. While advanced microscopy techniques facilitate morphological characterizations, traditional chemical characterizations are either qualitative or extremely involved. In this study, we apply Laser Induced Breakdown Spectroscopy (LIBS) for quantitative compositional analysis of NAs and NCs synthesized with varied elemental ratios by our in-house built pulsed laser ablation technique. Specifically, elemental ratios of binary PtNi, PdCo (NAs) and PtCo (NCs) of different compositions are determined from LIBS measurements employing an internal calibration scheme using the bulk matrix species as internal standards. Morphology and qualitative elemental compositions of the aforesaid NAs and NCs are confirmed from Transmission Electron Microscopy (TEM) images and Energy Dispersive X-ray Spectroscopy (EDX) measurements. LIBS experiments are carried out in ambient conditions with the NA and NC samples drop cast on silicon wafers after centrifugation to increase their concentrations. The technique does not call for cumbersome sample preparations including acid digestions and external calibration standards commonly required in Inductively Coupled Plasma-Optical Emission Spectroscopy (ICP-OES) techniques. Yet the quantitative LIBS results are in good agreement with the results from ICP-OES measurements. Our results indicate the feasibility of using LIBS in future for rapid and in-situ quantitative chemical characterizations of wide classes of synthesized NAs and NCs. Copyright © 2016 Elsevier B.V. All rights reserved.

  17. Molecular phylogeny of Subtribe Artemisiinae (Asteraceae), including Artemisia and its allied and segregate genera

    Science.gov (United States)

    Watson, Linda E; Bates, Paul L; Evans, Timothy M; Unwin, Matthew M; Estes, James R

    2002-01-01

    Background Subtribe Artemisiinae of Tribe Anthemideae (Asteraceae) is composed of 18 largely Asian genera that include the sagebrushes and mugworts. The subtribe includes the large cosmopolitan, wind-pollinated genus Artemisia, as well as several smaller genera and Seriphidium, that altogether comprise the Artemisia-group. Circumscription and taxonomic boundaries of Artemisia and the placements of these small segregate genera is currently unresolved. Results We constructed a molecular phylogeny for the subtribe using the internal transcribed spacers (ITS) of nuclear ribosomal DNA analyzed with parsimony, likelihood, and Bayesian criteria. The resulting tree is comprised of three major clades that correspond to the radiate genera (e.g., Arctanthemum and Dendranthema), and two clades of Artemisia species. All three clades have allied and segregate genera embedded within each. Conclusions The data support a broad concept of Artemisia s.l. that includes Neopallasia, Crossostephium, Filifolium, Seriphidium, and Sphaeromeria. However, the phylogeny excludes Elachanthemum, Kaschgaria, and Stilnolepis from the Artemisia-group. Additionally, the monophyly of the four subgenera of Artemisia is also not supported, with the exception of subg. Dracunculus. Homogamous, discoid capitula appear to have arisen in parallel four to seven times, with the loss of ray florets. Thus capitular morphology is not a reliable taxonomic character, which traditionally has been one of the defining characters. PMID:12350234

  18. Genera of euophryine jumping spiders (Araneae: Salticidae), with a combined molecular-morphological phylogeny.

    Science.gov (United States)

    Zhang, Junxia; Maddison, Wayne P

    2015-03-27

    Morphological traits of euophryine jumping spiders were studied to clarify generic limits in the Euophryinae and to permit phylogenetic classification of genera lacking molecular data. One hundred and eight genera are recognized within the subfamily. Euophryine generic groups and the delimitation of some genera are reviewed in detail. In order to explore the effect of adding formal morphological data to previous molecular phylogenetic studies, and to find morphological synapomorphies, eighty-two morphological characters were scored for 203 euophryine species and seven outgroup species. The morphological dataset does not perform as well as the molecular dataset (genes 28S, Actin 5C; 16S-ND1, COI) in resolving the phylogeny of Euophryinae, probably because of frequent convergence and reversal. The formal morphological data were mapped on the phylogeny in order to seek synapomorphies, in hopes of extending the phylogeny to include taxa for which molecular data are not available. Because of homoplasy, few globally-applicable morphological synapomorphies for euophryine clades were found. However, synapomorphies that are unique locally in subclades still help to delimit euophryine generic groups and genera. The following synonyms of euophryine genera are proposed: Maeotella with Anasaitis; Dinattus with Corythalia; Paradecta with Compsodecta; Cobanus, Chloridusa and Wallaba with Sidusa; Tariona with Mopiopia; Nebridia with Amphidraus; Asaphobelis and Siloca with Coryphasia; Ocnotelus with Semnolius; Palpelius with Pristobaeus; Junxattus with Laufeia; Donoessus with Colyttus; Nicylla, Pselcis and Thianitara with Thiania. The new genus Saphrys is erected for misplaced species from southern South America.

  19. The effect of bacterial environmental and metabolic stresses on a laser-induced breakdown spectroscopy (LIBS) based identification of Escherichia coli and Streptococcus viridans.

    Science.gov (United States)

    Mohaidat, Qassem; Palchaudhuri, Sunil; Rehse, Steven J

    2011-04-01

    In this paper we investigate the effect that adverse environmental and metabolic stresses have on the laser-induced breakdown spectroscopy (LIBS) identification of bacterial specimens. Single-pulse LIBS spectra were acquired from a non-pathogenic strain of Escherichia coli cultured in two different nutrient media: a trypticase soy agar and a MacConkey agar with a 0.01% concentration of deoxycholate. A chemometric discriminant function analysis showed that the LIBS spectra acquired from bacteria grown in these two media were indistinguishable and easily discriminated from spectra acquired from two other non-pathogenic E. coli strains. LIBS spectra were obtained from specimens of a nonpathogenic E. coli strain and an avirulent derivative of the pathogen Streptococcus viridans in three different metabolic situations: live bacteria reproducing in the log-phase, bacteria inactivated on an abiotic surface by exposure to bactericidal ultraviolet irradiation, and bacteria killed via autoclaving. All bacteria were correctly identified regardless of their metabolic state. This successful identification suggests the possibility of testing specimens that have been rendered safe for handling prior to LIBS identification. This would greatly enhance personnel safety and lower the cost of a LIBS-based diagnostic test. LIBS spectra were obtained from pathogenic and non-pathogenic bacteria that were deprived of nutrition for a period of time ranging from one day to nine days by deposition on an abiotic surface at room temperature. All specimens were successfully classified by species regardless of the duration of nutrient deprivation. © 2011 Society for Applied Spectroscopy

  20. Twining genera of (0,4) supersymmetric sigma models on K3

    International Nuclear Information System (INIS)

    Harrison, Sarah; Kachru, Shamit; Paquette, Natalie M.

    2014-01-01

    Conformal field theories with (0,4) worldsheet supersymmetry and K3 target can be used to compactify the E 8 ×E 8 heterotic string to six dimensions in a supersymmetric manner. The data specifying such a model includes an appropriate configuration of 24 gauge instantons in the E 8 ×E 8 gauge group to satisfy the constraints of anomaly cancellation. In this note, we compute twining genera — elliptic genera with appropriate insertions of discrete symmetry generators in the trace — for (0,4) theories with various instanton embeddings. We do this by constructing linear sigma models which flow to the desired conformal field theories, and using the techniques of localization. We present several examples of such twining genera which are consistent with a moonshine relating these (0,4) models to the finite simple sporadic group M 24

  1. Review of the genera of Conoderinae (Coleoptera, Curculionidae from North America, Central America, and the Caribbean

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    Salvatore S. Anzaldo

    2017-07-01

    Full Text Available The thirty-nine extant genera of Conoderinae known to occur in North America, Central America, and the Caribbean are reviewed based on external morphology. An identification key is provided along with diagnoses, distributions, species counts, and natural history information, when known, for each genus. Morphological character systems of importance for weevil classification are surveyed, potential relationships among the tribes and genera are discussed, and groups most in need of taxonomic and phylogenetic attention are identified. The following genera are transferred to new tribes: Acoptus LeConte, 1876 from the Lechriopini to the Othippiini (new placement and the South American genus Hedycera Pascoe, 1870 from the Lechriopini to the Piazurini (new placement. Philides Champion, 1906 and Philinna Champion, 1906 are transferred from the Lechriopini to Conoderinae incertae sedis (new placement although their placement as conoderines is uncertain. The species Copturomimus cinereus Heller, 1895 is designated as the type species of the genus Copturomimus Heller, 1895.

  2. Improved intact soil-core carbon determination applying regression shrinkage and variable selection techniques to complete spectrum laser-induced breakdown spectroscopy (LIBS).

    Science.gov (United States)

    Bricklemyer, Ross S; Brown, David J; Turk, Philip J; Clegg, Sam M

    2013-10-01

    Laser-induced breakdown spectroscopy (LIBS) provides a potential method for rapid, in situ soil C measurement. In previous research on the application of LIBS to intact soil cores, we hypothesized that ultraviolet (UV) spectrum LIBS (200-300 nm) might not provide sufficient elemental information to reliably discriminate between soil organic C (SOC) and inorganic C (IC). In this study, using a custom complete spectrum (245-925 nm) core-scanning LIBS instrument, we analyzed 60 intact soil cores from six wheat fields. Predictive multi-response partial least squares (PLS2) models using full and reduced spectrum LIBS were compared for directly determining soil total C (TC), IC, and SOC. Two regression shrinkage and variable selection approaches, the least absolute shrinkage and selection operator (LASSO) and sparse multivariate regression with covariance estimation (MRCE), were tested for soil C predictions and the identification of wavelengths important for soil C prediction. Using complete spectrum LIBS for PLS2 modeling reduced the calibration standard error of prediction (SEP) 15 and 19% for TC and IC, respectively, compared to UV spectrum LIBS. The LASSO and MRCE approaches provided significantly improved calibration accuracy and reduced SEP 32-55% over UV spectrum PLS2 models. We conclude that (1) complete spectrum LIBS is superior to UV spectrum LIBS for predicting soil C for intact soil cores without pretreatment; (2) LASSO and MRCE approaches provide improved calibration prediction accuracy over PLS2 but require additional testing with increased soil and target analyte diversity; and (3) measurement errors associated with analyzing intact cores (e.g., sample density and surface roughness) require further study and quantification.

  3. Molecular phylogeny of microhylid frogs (Anura: Microhylidae) with emphasis on relationships among New World genera

    Science.gov (United States)

    2012-01-01

    Background Over the last ten years we have seen great efforts focused on revising amphibian systematics. Phylogenetic reconstructions derived from DNA sequence data have played a central role in these revisionary studies but have typically under-sampled the diverse frog family Microhylidae. Here, we present a detailed phylogenetic study focused on expanding previous hypotheses of relationships within this cosmopolitan family. Specifically, we placed an emphasis on assessing relationships among New World genera and those taxa with uncertain phylogenetic affinities (i.e., incertae sedis). Results One mitochondrial and three nuclear genes (about 2.8 kb) were sequenced to assess phylogenetic relationships. We utilized an unprecedented sampling of 200 microhylid taxa representing 91% of currently recognized subfamilies and 95% of New World genera. Our analyses do not fully resolve relationships among subfamilies supporting previous studies that have suggested a rapid early diversification of this clade. We observed a close relationship between Synapturanus and Otophryne of the subfamily Otophryninae. Within the subfamily Gastrophryninae relationships between genera were well resolved. Conclusion Otophryninae is distantly related to all other New World microhylids that were recovered as a monophyletic group, Gastrophryninae. Within Gastrophryninae, five genera were recovered as non-monophyletic; we propose taxonomic re-arrangements to render all genera monophyletic. This hypothesis of relationships and updated classification for New World microhylids may serve as a guide to better understand the evolutionary history of this group that is apparently subject to convergent morphological evolution and chromosome reduction. Based on a divergence analysis calibrated with hypotheses from previous studies and fossil data, it appears that microhylid genera inhabiting the New World originated during a period of gradual cooling from the late Oligocene to mid Miocene. PMID:23228209

  4. Molecular phylogeny of microhylid frogs (Anura: Microhylidae with emphasis on relationships among New World genera

    Directory of Open Access Journals (Sweden)

    de Sá Rafael O

    2012-12-01

    Full Text Available Abstract Background Over the last ten years we have seen great efforts focused on revising amphibian systematics. Phylogenetic reconstructions derived from DNA sequence data have played a central role in these revisionary studies but have typically under-sampled the diverse frog family Microhylidae. Here, we present a detailed phylogenetic study focused on expanding previous hypotheses of relationships within this cosmopolitan family. Specifically, we placed an emphasis on assessing relationships among New World genera and those taxa with uncertain phylogenetic affinities (i.e., incertae sedis. Results One mitochondrial and three nuclear genes (about 2.8 kb were sequenced to assess phylogenetic relationships. We utilized an unprecedented sampling of 200 microhylid taxa representing 91% of currently recognized subfamilies and 95% of New World genera. Our analyses do not fully resolve relationships among subfamilies supporting previous studies that have suggested a rapid early diversification of this clade. We observed a close relationship between Synapturanus and Otophryne of the subfamily Otophryninae. Within the subfamily Gastrophryninae relationships between genera were well resolved. Conclusion Otophryninae is distantly related to all other New World microhylids that were recovered as a monophyletic group, Gastrophryninae. Within Gastrophryninae, five genera were recovered as non-monophyletic; we propose taxonomic re-arrangements to render all genera monophyletic. This hypothesis of relationships and updated classification for New World microhylids may serve as a guide to better understand the evolutionary history of this group that is apparently subject to convergent morphological evolution and chromosome reduction. Based on a divergence analysis calibrated with hypotheses from previous studies and fossil data, it appears that microhylid genera inhabiting the New World originated during a period of gradual cooling from the late Oligocene to

  5. Molecular phylogeny of microhylid frogs (Anura: Microhylidae) with emphasis on relationships among New World genera.

    Science.gov (United States)

    de Sá, Rafael O; Streicher, Jeffrey W; Sekonyela, Relebohile; Forlani, Mauricio C; Loader, Simon P; Greenbaum, Eli; Richards, Stephen; Haddad, Célio F B

    2012-12-10

    Over the last ten years we have seen great efforts focused on revising amphibian systematics. Phylogenetic reconstructions derived from DNA sequence data have played a central role in these revisionary studies but have typically under-sampled the diverse frog family Microhylidae. Here, we present a detailed phylogenetic study focused on expanding previous hypotheses of relationships within this cosmopolitan family. Specifically, we placed an emphasis on assessing relationships among New World genera and those taxa with uncertain phylogenetic affinities (i.e., incertae sedis). One mitochondrial and three nuclear genes (about 2.8 kb) were sequenced to assess phylogenetic relationships. We utilized an unprecedented sampling of 200 microhylid taxa representing 91% of currently recognized subfamilies and 95% of New World genera. Our analyses do not fully resolve relationships among subfamilies supporting previous studies that have suggested a rapid early diversification of this clade. We observed a close relationship between Synapturanus and Otophryne of the subfamily Otophryninae. Within the subfamily Gastrophryninae relationships between genera were well resolved. Otophryninae is distantly related to all other New World microhylids that were recovered as a monophyletic group, Gastrophryninae. Within Gastrophryninae, five genera were recovered as non-monophyletic; we propose taxonomic re-arrangements to render all genera monophyletic. This hypothesis of relationships and updated classification for New World microhylids may serve as a guide to better understand the evolutionary history of this group that is apparently subject to convergent morphological evolution and chromosome reduction. Based on a divergence analysis calibrated with hypotheses from previous studies and fossil data, it appears that microhylid genera inhabiting the New World originated during a period of gradual cooling from the late Oligocene to mid Miocene.

  6. Least speciose among the most speciose: Natural history correlates of monospecific and bispecific genera of Rodentia and Soricomorpha.

    Science.gov (United States)

    Amori, Giovanni; Bissattini, Alessandra Maria; Gippoliti, Spartaco; Vignoli, Leonardo; Maiorano, Luigi; Luiselli, Luca

    2017-11-01

    Monospecific and bispecific genera are of special concern as they represent unique phylogenetic/evolutionary trajectories within larger clades. In addition, as phylogenetically older taxa are supposed to be exposed to higher rarity and extinction risk, monospecific and bispecific genera may be intrinsically more prone to extinction risks than multispecies genera, although extinction risks also depend on the ecological and biological strategy of the species. Here, the distribution across biogeographical zones and the levels of threat to 2 speciose orders of mammals (monospecific and bispecific genera of Rodentia and Soricomorpha) are investigated in order to highlight major patterns at the worldwide scale. In Rodentia, 39.7% of the genera (n = 490) were monospecific and 17.9% were bispecific. In Soricomorpha, 44.4% of the total genera (n = 45) were monospecific and 15% were bispecific. There was a positive correlation between the number of monospecific genera and the total number of genera per family. Peaks of monospecific and bispecific genera richness were observed in Neotropical, Oriental and Afrotropical regions in rodents and in the Palearctic region in soricomorphs. Range size was significantly uneven across biogeographic region in rodents (with larger ranges in Nearctic and Oriental regions and smaller ranges in the Australian region), but there was no difference across biogeographic regions in terms of range size in soricomorphs. Most of the monospecific and bispecific genera occurred in forest habitat in both taxa. The frequency distribution of the monospecific and bispecific genera across IUCN categories did not differ significantly from the expected pattern using the total rodent genera and the multispecies genera. © 2017 International Society of Zoological Sciences, Institute of Zoology/Chinese Academy of Sciences and John Wiley & Sons Australia, Ltd.

  7. Two new genera and three new species of Epipaschiinae Meyrick from China (Lepidoptera, Pyralidae

    Directory of Open Access Journals (Sweden)

    Mingqiang Wang

    2017-12-01

    Full Text Available Two new genera of Epipaschiinae are described. The genus Arcanusa Wang, Chen & Wu, gen. n. is established for Ar. apexiarcanusa Wang, Chen & Wu, sp. n. and Ar. sinuosa (Moore, 1888, comb. n., described in Scopocera Moore, 1888 (junior synonym of Stericta Lederer, 1863. The female genitalia of Ar. sinuosa (Moore, 1888, comb. n. are described for the first time. Androconia Wang, Chen & Wu, gen. n. is erected, including two new species, An. rallusa Wang, Chen & Wu, sp. n. and An. morulusa Wang, Chen & Wu, sp. n. Illustrations of all adults and their genitalia, and a key to the two new genera are provided.

  8. A reassessment of the Hypoglossum group (Delesseriaceae, Rhodophyta), with a critique of its genera

    Science.gov (United States)

    Wynne, M. J.

    1988-09-01

    A reassessment of the Hypoglossum group (Delesseriaceae, Rhodophyta), with a critique of its genera. Eight genera are assigned to the Hypoglossum Kützing, Phitymophora J. Agardh, Pseudobranchioglossum Bodard, and Zellera Martens. The circumscription of the group is emended to include forms with network-forming ( Zellera) an dspirally twisted ( Duckerella) thalli. The definition of the group is lalso modified to include members (e.g. some species of Hypoglossum) in which tetrasporangia are produced by primary cells as in the Caloglossa group. Exogenous branching, a distinguishing feature of the closely related Caloglossa group, never occurs in the Hypoglossum group.

  9. Review of the genera Stenopyrgota Malloch and Tropidothrinax Enderlein (Diptera, Pyrgotidae

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    Ramon Luciano Mello

    2014-03-01

    Full Text Available Review of the genera Stenopyrgota Malloch and Tropidothrinax Enderlein (Diptera, Pyrgotidae. The Neotropical genera Stenopyrgota Malloch, 1929 and Tropidothrinax Enderlein, 1942 are reviewed. The genus Stenopyrgota is composed by the species S. mexicana Malloch, 1929 and S. crassitibia Aczél, 1956. The monotypic genus Tropidothrinax is composed by the species T. boliviensis Enderlein, 1942. The species of Stenopyrgota and Tropidothrinax are redescribed and illustrations of the main taxonomic characters are given. Illustrations of the type material of the species covered by this paper are presented for the first time.

  10. Revision of the Oriental genera of Agathidinae (Hymenoptera, Braconidae with an emphasis on Thailand and interactive keys to genera published in three different formats

    Directory of Open Access Journals (Sweden)

    Michael Sharkey

    2009-09-01

    Full Text Available The genera of Oriental Agathidinae are revised and a fully illustrated dichotomous key is presented. New generic concepts are proposed for Bassus Fabricius, 1804 and Hypsostypos Baltazar, 1963. Bassus is restricted to a clade with an Old World distribution and the remaining members are divided amongst the resurrected genera Camptothlipsis Enderlein, 1920, Lytopylus Förster, 1862, and Therophilus Wesmael, 1837. The concept of Hypsostypos is restricted and the new genus Amputostypos Sharkey, gen. n. is proposed to include species formerly included in Hypsostypos that do not have raised antennal bases. Troticus Brullé, 1846 is reported from the Oriental region for the first time. Eighteen genera are recognized for Thailand and neighboring areas, i.e., Agathis Latreille, 1804, Amputostypos, Aneurobracon Brues, 1930, Bassus, Biroia Szépligeti, 1900, Braunsia Kriechbaumer, 1894, Camptothlipsis, Coccygidium Saussure, 1892, Cremnops Förster, 1862, Disophrys Förster, 1862, Earinus Wesmael, 1837, Euagathis Szépligeti, 1900, Gryochus Enderlein, 1920, Hypsostypos, Lytopylus Förster, 1862, Therophilus, Cremnoptoides van Achterberg & Chen, 2004, and Troticus. Identification keys to the genera are provided as a standard textual dichotomous key, as well as online keys in three different formats (conventional dichotomous, DELTA/Intkey, Lucid, and MX to enable users to choose their prefered platform and to allow direct comparisons of the technologies for producing online keys. Publication of underlying data (data matrices, character states table, and images under the OpenDataCommons license (ODbl (http://www.opendatacommons.org/licenses/odbl/1.0/ for DELTA/Intkey files (doi: 10.3897/zookeys.21.271.app.1.ik, primary DELTA files (10.3897/zookeys.21.271.app.2.ik Lucid3 (LIF3 and Lucid SDD key data files (doi: 10.3897/zookeys.21.271.app.3.ik and MX MySQL database files (doi: 10.3897/zookeys.21.271.app.4.ik allows future workers to edit keys and to add newly

  11. Florae Malesianae Precursores XXXIV. Notes on some genera of Celastraceae in Malaysia

    NARCIS (Netherlands)

    Hou, Ding

    1963-01-01

    There is a great diversity of opinion regarding the interpretation of the genera and some species in the former Hippocrateaceae. If one reads the comprehensive and detailed revision of the New World Hippocrateaceae by A. C. Smith (Brittonia 3, 1940, 341—555), one may have an impression of it. For

  12. New genera and species of the tribe Taphurini (Hemiptera, Cicadidae) from Sundaland

    NARCIS (Netherlands)

    Duffels, J.P.

    2011-01-01

    Three new genera and five species of Taphurini from Sundaland (Malayan Peninsula, Sumatra, Borneo and Java) are described: Sundabroma including S. bimaculata sp. n. from Borneo and S. suffusca sp. n. from the Malayan Peninsula, Allobroma including A. kedenburgi (Breddin, 1905) comb. n. from Borneo

  13. Contrasting latitudinal patterns of life-history divergence in two genera of new world thrushes (Turdinae)

    Science.gov (United States)

    Boyce, Andy J.; Martin, Thomas E.

    2017-01-01

    Several long-standing hypotheses have been proposed to explain latitudinal patterns of life-history strategies. Here, we test predictions of four such hypotheses (seasonality, food limitation, nest predation and adult survival probability) by examining life-history traits and age-specific mortality rates of several species of thrushes (Turdinae) based on field studies at temperate and tropical sites and data gathered from the literature. Thrushes in the genus Catharus showed the typical pattern of slower life-history strategies in the tropics while co-occuring Turdus thrushes differed much less across latitudes. Seasonality is a broadly accepted hypothesis for latitudinal patterns, but the lack of concordance in latitudinal patterns between co-existing genera that experience the same seasonal patterns suggests seasonality cannot fully explain latitudinal trait variation in thrushes. Nest-predation also could not explain patterns based on our field data and literature data for these two genera. Total feeding rates were similar, and per-nestling feeding rates were higher at tropical latitudes in both genera, suggesting food limitation does not explain trait differences in thrushes. Latitudinal patterns of life histories in these two genera were closely associated with adult survival probability. Thus, our data suggest that environmental influences on adult survival probability may play a particularly strong role in shaping latitudinal patterns of life-history traits.

  14. An illustrated key to nymphs of Perlidae (Insecta, Plecoptera genera in Central Amazonia, Brazil

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    Hamada Neusa

    2003-01-01

    Full Text Available An illustrated key to nymphs of Perlidae collected in streams of Central Amazonia, Brazil is provided. Three genera are reported for this region: Macrogynoplax Enderlein, Anacroneuria Klapálek and Enderleina Jewett. Additional diagnostic characters are provided for Enderleina nymphs.

  15. Three new South American mailed catfishes of the genera Rineloricaria and Loricariichthys (Pisces, Siluriformes, Loricariide)

    NARCIS (Netherlands)

    Isbrücker, I.J.H.; Nijssen, H.

    1979-01-01

    Three new species belonging to two different genera of South American mailed catfishes of the subfamily Loricariinae are described and figured. A discussion of and comparative notes on related species are added. Rineloricaria formosa n. sp. is described from the Río Inírida/Río Orinoco drainage in

  16. Phylogenetic Relationships of Five Asian Schilbid Genera Including Clupisoma (Siluriformes: Schilbeidae.

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    Jing Wang

    Full Text Available The phylogenetic relationships of Asian schilbid catfishes of the genera Clupisoma, Ailia, Horabagrus, Laides and Pseudeutropius are poorly understood, especially those of Clupisoma. Herein, we reconstruct the phylogeny of 38 species of catfishes belonging to 28 genera and 14 families using the concatenated mitochondrial genes COI, cytb, and 16S rRNA, as well as the nuclear genes RAG1 and RAG2. The resulting phylogenetic trees consistently place Clupisoma as the sister taxon of Laides, and the five representative Asian schilbid genera form two monophyletic groups with the relationships (Ailia (Laides, Clupisoma and (Horabagrus, Pseudeutropius. The so-called "Big Asia" lineage relates distantly to African schilbids. Independent analyses of the mitochondrial and nuclear DNA data yield differing trees for the two Asian schilbid groups. Analyses of the mitochondrial gene data support a sister-group relationship for (Ailia (Laides, Clupisoma and the Sisoroidea and a sister-taxon association of (Horabagrus, Pseudeutropius and the Bagridae. In contrast, analyses of the combined nuclear data indicate (Ailia (Laides, Clupisoma to be the sister group to (Horabagrus, Pseudeutropius. Our results indicate that the Horabagridae, recognized by some authors as consisting of Horabagrus, Pseudeutropius and Clupisoma does not include the latter genus. We formally erect a new family, Ailiidae fam. nov. for a monophyletic Asian group comprised of the genera Ailia, Laides and Clupisoma.

  17. Conspectus of the genera Scurrula L. and Taxillus Tieghem (Loranthaceae) in the Malesian region

    NARCIS (Netherlands)

    Barlow, Bryan A.

    1991-01-01

    The closely related genera Scurrula and Taxillus are reviewed for the Malesian region as a precursor to a treatment for Flora Malesiana. Scurrula is represented in the region by 8 species, of which S. aphodastrica and S. didyma are described as new. Taxillus is represented by one species, T.

  18. Phylogenetic reassessment of Specklinia and its allied genera in the pleurothallidinae (Orchidaceae)

    NARCIS (Netherlands)

    Karremans, Adam P.; Albertazzi, Federico J.; Bakker, Freek T.; Bogarín, Diego; Eurlings, M.C.M.; Pridgeon, Alec; Pupulin, Franco; Gravendeel, Barbara

    2016-01-01

    The phylogenetic relationships within Specklinia (Pleurothallidinae; Orchidaceae) and related genera are re-evaluated using Bayesian analyses of nrITS and chloroplast matK sequence data of a wide sampling of species. Specklinia is found paraphyletic in the DNA based trees, with species

  19. A plastid gene phylogeny of the non-photosynthetic parasitic Orobanche (Orobanchaceae) and related genera.

    Science.gov (United States)

    Park, Jeong-Mi; Manen, Jean-François; Colwell, Alison E; Schneeweiss, Gerald M

    2008-07-01

    The phylogenetic relationships of the non-photosynthetic Orobanche sensu lato (Orobanchaceae), which includes some of the economically most important parasitic weeds, remain insufficiently understood and controversial. This concerns both the phylogenetic relationships within the genus, in particular its monophyly or lack thereof, and the relationships to other holoparasitic genera such as Cistanche or Conopholis. Here we present the first comprehensive phylogenetic study of this group based on a region from the plastid genome (rps2 gene). Although substitution rates appear to be elevated compared to the photosynthetic members of Orobanchaceae, relationships among the major lineages Cistanche, Conopholis plus Epifagus, Boschniakia rossica (Cham. & Schltdl.) B. Fedtsch., B. himalaica Hook. f. & Thomson, B. hookeri Walp. plus B. strobilacea A. Gray, and Orobanche s. l. remain unresolved. Resolution within Orobanche, however, is much better. In agreement with morphological, cytological and other molecular phylogenetic evidence, five lineages, corresponding to the four traditionally recognised sections (Gymnocaulis, Myzorrhiza, Orobanche, Trionychon) and O. latisquama Reut. ex Boiss. (of sect. Orobanche), can be distinguished. A combined analysis of plastid rps2 and nuclear ITS sequences of the holoparasitic genera results in more resolved and better supported trees, although the relationships among Orobanche s. l., Cistanche, and the clade including the remaining genera is unresolved. Therefore, rps2 is a marker from the plastid genome that is well-suited to be used in combination with other already established nuclear markers for resolving generic relationships of Orobanche and related genera.

  20. Establishment of three new genera in the family Geminiviridae: Becurtovirus, Eragrovirus and Turncurtovirus

    KAUST Repository

    Varsani, Arvind

    2014-03-22

    The family Geminiviridae includes plant-infecting circular single-stranded DNA viruses that have geminate particle morphology. Members of this family infect both monocotyledonous and dicotyledonous plants and have a nearly global distribution. With the advent of new molecular tools and low-cost sequencing, there has been a significant increase in the discovery of new geminiviruses in various cultivated and non-cultivated plants. In this communication, we highlight the establishment of three new genera (Becurtovirus, Eragrovirus and Turncurtovirus) to accommodate various recently discovered geminiviruses that are highly divergent and, in some cases, have unique genome architectures. The genus Becurtovirus has two viral species, Beet curly top Iran virus (28 isolates; leafhopper vector Circulifer haematoceps) and Spinach curly top Arizona virus (1 isolate; unknown vector), whereas the genera Eragrovirus and Turncurtovirus each have a single assigned species: Eragrostis curvula streak virus (6 isolates; unknown vector) and Turnip curly top virus (20 isolates; leafhopper vector Circulifer haematoceps), respectively. Based on analysis of all of the genome sequences available in public databases for each of the three new genera, we provide guidelines and protocols for species and strain classification within these three new genera. © 2014 Springer-Verlag Wien.

  1. Establishment of three new genera in the family Geminiviridae: Becurtovirus, Eragrovirus and Turncurtovirus

    KAUST Repository

    Varsani, Arvind; Navas-Castillo, Jesú s; Moriones, Enrique; Herná ndez-Zepeda, Cecilia; Idris, Ali; Brown, Judith K.; Murilo Zerbini, F.; Martin, Darren Patrick

    2014-01-01

    The family Geminiviridae includes plant-infecting circular single-stranded DNA viruses that have geminate particle morphology. Members of this family infect both monocotyledonous and dicotyledonous plants and have a nearly global distribution. With the advent of new molecular tools and low-cost sequencing, there has been a significant increase in the discovery of new geminiviruses in various cultivated and non-cultivated plants. In this communication, we highlight the establishment of three new genera (Becurtovirus, Eragrovirus and Turncurtovirus) to accommodate various recently discovered geminiviruses that are highly divergent and, in some cases, have unique genome architectures. The genus Becurtovirus has two viral species, Beet curly top Iran virus (28 isolates; leafhopper vector Circulifer haematoceps) and Spinach curly top Arizona virus (1 isolate; unknown vector), whereas the genera Eragrovirus and Turncurtovirus each have a single assigned species: Eragrostis curvula streak virus (6 isolates; unknown vector) and Turnip curly top virus (20 isolates; leafhopper vector Circulifer haematoceps), respectively. Based on analysis of all of the genome sequences available in public databases for each of the three new genera, we provide guidelines and protocols for species and strain classification within these three new genera. © 2014 Springer-Verlag Wien.

  2. Pollen of Sarawakodendron (Celastraceae) and some related genera, with notes on techniques

    NARCIS (Netherlands)

    Hou, Ding

    1969-01-01

    1. A simple technique for acetolysis of small quantities of polliniferous (herbarium) material is described and notes on pollen photomicrography are presented. 2. Pollen grains of Sarawakodendron and six related genera, consisting of twenty-nine mostly Malesian species, have been examined and

  3. Biogeography of the Malagasy Celastraceae: Multiple independent origins followed by widespread dispersal of genera from Madagascar.

    Science.gov (United States)

    Bacon, Christine D; Simmons, Mark P; Archer, Robert H; Zhao, Liang-Cheng; Andriantiana, Jacky

    2016-01-01

    Of the 97 currently recognized genera of Celastraceae, 19 are native to Madagascar, including six endemics. In this study we conducted the most thorough phylogenetic analysis of Celastraceae yet completed with respect to both character and taxon sampling, and include representatives of five new endemic genera. Fifty-one new accessions, together with 328 previously used accessions of Celastrales, were sampled for morphological characters, two rDNA gene regions, and two plastid gene regions. The endemic Malagasy genera are resolved in two separate lineages-Xenodrys by itself and all other endemic genera in a clade that also includes four lineages inferred to have dispersed from Madagascar: Brexia madagascariensis (Mascarene Islands, coastal Africa), Elaeodendron (West Indies, Africa to New Caledonia), and Pleurostylia (Africa to New Caledonia). Of the 12 extant Malagasy Celastraceae lineages identified, eight are clearly of African origin. The origins of the remaining four lineages are less clear, but reasonable possibilities include America, Eurasia, Africa, southern India, Malesia, and Australia. Based on 95% credible age intervals from fossil-calibrated molecular dating, all 12 extant Malagasy Celastraceae lineages appear to have arisen following dispersal after the separation of Madagascar from other landmasses within the last 70 million years. Copyright © 2015 Elsevier Inc. All rights reserved.

  4. Molecular phylogeny of Laetiporus and other brown rot polypore genera in North America

    Science.gov (United States)

    Daniel L. Lindner; Mark T. Banik

    2008-01-01

    Phylogenetic relationships were investigated among North American species of Laetiporus, Leptoporus, Phaeolus, Pycnoporellus, and Wolfiporia using ITS, nuclear large subunit and mitochondrial small subunit rDNA sequences. Members of these genera have poroid hymenophores, simple septate hyphae and cause brown rots in a variety of...

  5. A plastid gene phylogeny of the non-photosynthetic parasitic Orobanche (Orobanchaceae) and related genera

    Science.gov (United States)

    Park, J.-M.; Manen, J.-F.; Colwell, A.E.; Schneeweiss, G.M.

    2008-01-01

    The phylogenetic relationships of the non-photosynthetic Orobanche sensu lato (Orobanchaceae), which includes some of the economically most important parasitic weeds, remain insufficiently understood and controversial. This concerns both the phylogenetic relationships within the genus, in particular its monophyly or lack thereof, and the relationships to other holoparasitic genera such as Cistanche or Conopholis. Here we present the first comprehensive phylogenetic study of this group based on a region from the plastid genome (rps2 gene). Although substitution rates appear to be elevated compared to the photosynthetic members of Orobanchaceae, relationships among the major lineages Cistanche, Conopholis plus Epifagus, Boschniakia rossica (Cham. & Schltdl.) B. Fedtsch., B. himalaica Hook. f. & Thomson, B. hookeri Walp. plus B. strobilacea A. Gray, and Orobanche s. l. remain unresolved. Resolution within Orobanche, however, is much better. In agreement with morphological, cytological and other molecular phylogenetic evidence, five lineages, corresponding to the four traditionally recognised sections (Gymnocaulis, Myzorrhiza, Orobanche, Trionychon) and O. latisquama Reut. ex Boiss. (of sect. Orobanche), can be distinguished. A combined analysis of plastid rps2 and nuclear ITS sequences of the holoparasitic genera results in more resolved and better supported trees, although the relationships among Orobanche s. l., Cistanche, and the clade including the remaining genera is unresolved. Therefore, rps2 is a marker from the plastid genome that is well-suited to be used in combination with other already established nuclear markers for resolving generic relationships of Orobanche and related genera. ?? 2008 The Botanical Society of Japan and Springer.

  6. Impact socio professionnel de la libération chirurgicale du syndrome du canal carpien

    Science.gov (United States)

    Kraiem, Aouatef Mahfoudh; Hnia, Hajer; Bouzgarrou, Lamia; Henchi, Mohamed Adnène; Khalfallah, Taoufik

    2016-01-01

    L’objectif de notre travail était d’étudier les conséquences socioprofessionnelles d’une libération chirurgicale du SCC. Il s’agit d’une étude transversale portant sur les sujets opérés pour un SCC d’origine professionnelle ; recensés dans le Service de Médecine de Travail et de Pathologies Professionnelles au CHU Tahar Sfar de Mahdia en Tunisie sur une période de 8 ans allant du 1 Janvier 2006 au mois Décembre 2013. Le recueil des données s’est basé sur une fiche d’enquête, portant sur la description des caractéristiques socioprofessionnelles, médicales, et sur le devenir professionnel des participants. Pour étudier les contraintes psychosociales au travail, nous avons adopté le questionnaire de Karasek. La durée d’arrêt de travail après libération chirurgicale du SCC était significativement liée à l’existence d’autres troubles musculo-squelettiques autre que le SCC, la déclaration du SCC en maladie professionnelle et à l’ancienneté professionnelle des salariés. Quant au devenir professionnel des salariés opérés, 50,7% ont gardé le même poste, 15,3% ont bénéficié d’un aménagement de poste et 33,8% ont bénéficié d’un changement de poste dans la même entreprise. Le devenir professionnel de ces salariés était corrélé à leurs qualifications professionnelles et au type de l’atteinte sensitive et/ou motrice du nerf médian à l’EMG. Un certain nombre de facteurs non lésionnels déterminaient la durée de l’arrêt de travail, alors que le devenir professionnel des opérés pour SCC dépendait essentiellement de leurs qualifications professionnelles et des données de l’électromyogramme. Il est certain que des travaux beaucoup plus larges permettraient d’affiner encore ces résultats. PMID:27800089

  7. Návrh posuvu fokusačního objektivu uvnitř interakční komory LIBS aparatury

    OpenAIRE

    Olejník, Ivan

    2008-01-01

    Diplomová práca popisuje návrh posuvu fokusačného objektívu vo vnútri interakčnej komory LIBS. Obsahuje popis základných vlastností a funkcií LIBS spektroskopie. Opisuje prehžad použitežných komponentov, hodnotí ich vlastnosti a vhodnosť použitia v konštrukcii posuvu do vákua. Ďalej uvádza výsledné konštrukčné riešenie lineárneho posuvu do vákua a hodnotí jeho výhody pre metódu LIBS. This diploma thesis describes the design of a translation stage for focusing objective inside the LIBS inte...

  8. Feasibility of atomic and molecular laser induced breakdown spectroscopy (LIBS) to in-situ determination of chlorine in concrete : final report.

    Science.gov (United States)

    2016-10-01

    Laser-induced breakdown spectroscopy (LIBS) has been studied as a fast method of detecting chlorine in concrete samples. Both single pulse (SP) and double pulse (DP) experiments have been tested. Several combinations of lasers (Neodymium-Yttrium Alum...

  9. Le délibéré aux assises, ultime point aveugle dans l’affaire d’Outreau

    OpenAIRE

    Fayol-Noireterre, Jean-Marie

    2009-01-01

    Cet article envisage les délibérés des cours d’assises, en premier ressort et en appel, de l’affaire d’Outreau, à partir des auditions de la commission d’enquête parlementaire, et à la lumière d’une expérience professionnelle de magistrat (17 années comme juge des enfants, 16 années comme président d'assises). Cette libre projection permet de parcourir, à partir des textes de loi, des pratiques de conduites de délibérés. Il s'agit aussi d'aborder les problèmes inhérents au traitement judiciai...

  10. A comparison of leaf crystal macropatterns in the two sister genera Piper and Peperomia (Piperaceae).

    Science.gov (United States)

    Horner, Harry T; Wanke, Stefan; Samain, Marie-Stéphanie

    2012-06-01

    This is the first large-scale study comparing leaf crystal macropatterns of the species-rich sister genera Piper and Peperomia. It focuses on identifying types of calcium oxalate crystals and their macropatterns in leaves of both genera. The Piper results are placed in a phylogenetic context to show evolutionary patterns. This information will expand knowledge about crystals and provide specific examples to help study their form and function. One example is the first-time observation of Piper crystal sand tumbling in chlorenchyma vacuoles. Herbarium and fresh leaves were cleared of cytoplasmic content and examined with polarizing microscopy to identify types of crystals and their macropatterns. Selected hydrated herbarium and fresh leaf punches were processed for scanning electron microscopy and x-ray elemental analysis. Vibratome sections of living Piper and Peperomia leaves were observed for anatomical features and crystal movement. Both genera have different leaf anatomies. Piper displays four crystal types in chlorenchyma-crystal sand, raphides, styloids, and druses, whereas Peperomia displays three types-druses, raphides, and prisms. Because of different leaf anatomies and crystal types between the genera, macropatterns are completely different. Crystal macropattern evolution in both is characterized by increasing complexity, and both may use their crystals for light gathering and reflection for efficient photosynthesis under low-intensity light environments. Both genera have different leaf anatomies, types of crystals and crystal macropatterns. Based on Piper crystals associated with photosynthetic tissues and low-intensity light, further study of their function and association with surrounding chloroplasts is warranted, especially active crystal movement.

  11. Quantitative Analysis of KF-LiF-ZrF4 Molten Salt by Probe Assisted in-situ LIBS Systems

    International Nuclear Information System (INIS)

    Kim, S.H.; Moon, J.H.; Kim, D.H.; Hwang, I.S.; Lee, J.H.

    2015-01-01

    Full text of publication follows: Pyro-processing draws attention as a recycling process of spent nuclear fuel for future nuclear reactor. In the aspect of process control and safeguards of the pyro-processing, it requires a technology to measure the concentration of molten salt in real-time. The existing technologies measure the concentration by chemical analysis of sampled molten salt in the hot cell but it is disadvantageous in the aspects of cost, safety and time. The LIBS (Laser-Induced Breakdown Spectroscopy) is a form of atomic emission spectroscopy in which a pulsed laser is used as the excitation source. LIBS technology is appropriate to measure sensitive nuclear materials in hot cell because it is capable of measuring specimen quantitatively and qualitatively by exited atom by laser. Spectrum obtained from plasma is largely influenced by laser operation conditions and physical properties of specimens. Also, plasma induction is limited on the surface of specimen, so analysis of composition inside of the molten salt is extremely difficult. Thus, several restrictions should be overcome in order to apply LIBS for the measurement of molten salt (KF-LiF-ZrF 4 ) composition in real-time. In this study probe assisted LIBS system will be introduced with KF-LiF-ZrF 4 to quantitatively measure molten salt composition. Echelle spectrometer was used and the measurable wavelength area was 250-400 nm, the range of UV ray. NIST atomic spectra database measured the wavelength for molten salt composition, and each element was selected high signal intensity and wavelength range that is not overlapped by other elements. (authors)

  12. Évaluation de la qualité de la connaissance dans une perspective délibérative

    NARCIS (Netherlands)

    van der Sluijs, J.P.; Douguet, J.M.; O'Connor, M.; Ravetz, J.

    2008-01-01

    sh Cet article propose une vision des démarches d’évaluation de l’adéquation de la connaissance scientifique dans des situations d’incertitude forte et irréductible en recourant à des processus délibératifs élargis. Dans l’optique de la Science Post-Normale, la démarche s’appuie, d’un point de vue

  13. Taguchi Ukichi, un libéral opiniâtre de l’ère Meiji

    OpenAIRE

    Hurth, Pascal

    2014-01-01

    Journaliste, historien et homme politique, Taguchi Ukichi s’est fait le chantre du libéralisme à la fin du xixe siècle en défendant le libre-échange et en s’opposant aux propriétaires fonciers. Champion of Liberalism at the end of the 19th century, Taguchi Ukichi (journalist, historian and politician) was a staunch advocate of free trade, strongly opposed to landowners.

  14. The determination of V and Mo by dispersive liquid–liquid microextraction (DLLME) combined with laser-induced breakdown spectroscopy (LIBS)

    OpenAIRE

    Jesus, Amanda M. D. de; Aguirre Pastor, Miguel Ángel; Hidalgo Núñez, Montserrat; Canals Hernández, Antonio; Pereira-Filho, Edenir R.

    2014-01-01

    Laser-induced breakdown spectroscopy (LIBS) is a promising analytical technique with well-known advantages and limitations. However, despite its growing popularity, this technique has been applied mainly to solid samples and there have been a smaller number of studies devoted to liquid samples. This lack of studies is mainly due to experimental difficulties in the analysis of liquid matrices. Sensitivity can be improved and matrix effects minimized in the LIBS analysis of aqueous samples by u...

  15. A revision of the haploporinae nicoll, 1914 (digenea: haploporidae) from mullets (mugilidae): two new haploporine genera and a key to the genera of the subfamily.

    Science.gov (United States)

    Blasco-Costa, Isabel; Montero, Francisco E; Gibson, David I; Balbuena, Juan Antonio; Kostadinova, Aneta

    2009-03-01

    Two new haploporine genera are established for parasites of mullets. Ragaia n. g. is erected for R. lizae n. sp. from Liza ramado in the Ebro Delta on the Mediterranean Coast of Spain. This new genus is distinguished by the unique combination of the following characters: a strongly muscular ventral sucker which is twice as large as the oral sucker; a large, muscular hermaphroditic sac similar in length to the ventral sucker; a saccular, thick-walled internal seminal vesicle which is larger than the external seminal vesicle; and the ovary and vitellarium located rather close to the posterior extremity. Pseudodicrogaster n. g. is erected to accommodate Dicrogaster japonica Machida, 1996, as P. japonica (Machida, 1996) n. comb., a parasite of Mugil cephalus L. off Fukaura, Japan. This genus is recognised on the basis of: the tubular condition of both the internal and external seminal vesicles, the latter being much shorter than the former; the sucker ratio; the massive pyriform hermaphroditic sac; the location of the testis; and the presence of two eye-spots in developed miracidia. A key to the nine recognised genera of the Haploporinae is presented.

  16. Classification of red wine based on its protected designation of origin (PDO) using Laser-induced Breakdown Spectroscopy (LIBS).

    Science.gov (United States)

    Moncayo, S; Rosales, J D; Izquierdo-Hornillos, R; Anzano, J; Caceres, J O

    2016-09-01

    This work reports on a simple and fast classification procedure for the quality control of red wines with protected designation of origin (PDO) by means of Laser Induced Breakdown Spectroscopy (LIBS) technique combined with Neural Networks (NN) in order to increase the quality assurance and authenticity issues. A total of thirty-eight red wine samples from different PDO were analyzed to detect fake wines and to avoid unfair competition in the market. LIBS is well known for not requiring sample preparation, however, in order to increase its analytical performance a new sample preparation treatment by previous liquid-to-solid transformation of the wine using a dry collagen gel has been developed. The use of collagen pellets allowed achieving successful classification results, avoiding the limitations and difficulties of working with aqueous samples. The performance of the NN model was assessed by three validation procedures taking into account their sensitivity (internal validation), generalization ability and robustness (independent external validation). The results of the use of a spectroscopic technique coupled with a chemometric analysis (LIBS-NN) are discussed in terms of its potential use in the food industry, providing a methodology able to perform the quality control of alcoholic beverages. Copyright © 2016 Elsevier B.V. All rights reserved.

  17. Fabrication of Si negative electrodes for Li-ion batteries (LIBs) using cross-linked polymer binders.

    Science.gov (United States)

    Jang, Suk-Yong; Han, Sien-Ho

    2016-12-19

    Currently, Si as an active material for LIBs has been attracting much attention due to its high theoretical specific capacity (3572 mAh g -1 ). However, a disadvantage when using a Si negative electrode for LIBs is the abrupt drop of its capabilities during the cycling process. Therefore, there have been a few studies of polymers such as poly(vinylidene fluoride) (PVdF), carboxymethyl cellulose (CMC), styrene butadiene rubber (SBR) and polyacrylic acid (PAA) given that the robust structure of a polymeric binder to LIBs anodes is a promising means by which to enhance the performance of high-capacity anodes. These studies essentially focused mainly on modifying of the linear-polymer component or on copolymers dissolved in solvents. Cross-linking polymers as a binder may be preferred due to their good scratch resistance, excellent chemical resistance and high levels of adhesion and resilience. However, because these types of polymers (with a rigid structure and cross-linking points) are also insoluble in general organic solvents, applying these types in this capacity is virtually impossible.

  18. Secondary plasma formation after single pulse laser ablation underwater and its advantages for laser induced breakdown spectroscopy (LIBS).

    Science.gov (United States)

    Gavrilović, M R; Cvejić, M; Lazic, V; Jovićević, S

    2016-06-07

    In this work we present studies of spatial and temporal plasma evolution after single pulse ablation of an aluminium target in water. The laser ablation was performed using 20 ns long pulses emitted at 1064 nm. The plasma characterization was performed by fast photography, the Schlieren technique, shadowgraphy and optical emission spectroscopy. The experimental results indicate the existence of two distinct plasma stages: the first stage has a duration of approximately 500 ns from the laser pulse, and is followed by a new plasma growth starting from the crater center. The secondary plasma slowly evolves inside the growing vapor bubble, and its optical emission lasts over several tens of microseconds. Later, the hot glowing particles, trapped inside the vapor cavity, were detected during the whole cycle of the bubble, where the first collapse occurs after 475 μs from the laser pulse. Differences in the plasma properties during the two evolution phases are discussed, with an accent on the optical emission since its detection is of primary importance for LIBS. Here we demonstrate that the LIBS signal quality in single pulse excitation underwater can be greatly enhanced by detecting only the secondary plasma emission, and also by applying long acquisition gates (in the order of 10-100 μs). The presented results are of great importance for LIBS measurements inside a liquid environment, since they prove that a good analytical signal can be obtained by using nanosecond pulses from a single commercial laser source and by employing cost effective, not gated detectors.

  19. Laser-induced breakdown spectroscopy (LIBS) for rapid analysis of ash, potassium and magnesium in gluten free flours.

    Science.gov (United States)

    Markiewicz-Keszycka, Maria; Casado-Gavalda, Maria P; Cama-Moncunill, Xavier; Cama-Moncunill, Raquel; Dixit, Yash; Cullen, Patrick J; Sullivan, Carl

    2018-04-01

    Gluten free (GF) diets are prone to mineral deficiency, thus effective monitoring of the elemental composition of GF products is important to ensure a balanced micronutrient diet. The objective of this study was to test the potential of laser-induced breakdown spectroscopy (LIBS) analysis combined with chemometrics for at-line monitoring of ash, potassium and magnesium content of GF flours: tapioca, potato, maize, buckwheat, brown rice and a GF flour mixture. Concentrations of ash, potassium and magnesium were determined with reference methods and LIBS. PCA analysis was performed and presented the potential for discrimination of the six GF flours. For the quantification analysis PLSR models were developed; R 2 cal were 0.99 for magnesium and potassium and 0.97 for ash. The study revealed that LIBS combined with chemometrics is a convenient method to quantify concentrations of ash, potassium and magnesium and present the potential to classify different types of flours. Copyright © 2017 Elsevier Ltd. All rights reserved.

  20. Dehydrated Carbon Coupled with Laser-Induced Breakdown Spectrometry (LIBS) for the Determination of Heavy Metals in Solutions.

    Science.gov (United States)

    Niu, Guanghui; Shi, Qi; Xu, Mingjun; Lai, Hongjun; Lin, Qingyu; Liu, Kunping; Duan, Yixiang

    2015-10-01

    In this article, a novel and alternative method of laser-induced breakdown spectroscopy (LIBS) analysis for liquid sample is proposed, which involves the removal of metal ions from a liquid to a solid substrate using a cost-efficient adsorbent, dehydrated carbon, obtained using a dehydration reaction. Using this new technique, researchers can detect trace metal ions in solutions qualitatively and quantitatively, and the drawbacks of performing liquid analysis using LIBS can be avoided because the analysis is performed on a solid surface. To achieve better performance using this technique, we considered parameters potentially influencing both adsorption performance and LIBS analysis. The calibration curves were evaluated, and the limits of detection obtained for Cu(2+), Pb(2+), and Cr(3+) were 0.77, 0.065, and 0.46 mg/L, respectively, which are better than those in the previous studies. In addition, compared to other absorbents, the adsorbent used in this technique is much cheaper in cost, easier to obtain, and has fewer or no other elements other than C, H, and O that could result in spectral interference during analysis. We also used the recommended method to analyze spiked samples, obtaining satisfactory results. Thus, this new technique is helpful and promising for use in wastewater analysis and management.

  1. A hybrid LIBS-Raman system combined with chemometrics: an efficient tool for plastic identification and sorting.

    Science.gov (United States)

    Shameem, K M Muhammed; Choudhari, Khoobaram S; Bankapur, Aseefhali; Kulkarni, Suresh D; Unnikrishnan, V K; George, Sajan D; Kartha, V B; Santhosh, C

    2017-05-01

    Classification of plastics is of great importance in the recycling industry as the littering of plastic wastes increases day by day as a result of its extensive use. In this paper, we demonstrate the efficacy of a combined laser-induced breakdown spectroscopy (LIBS)-Raman system for the rapid identification and classification of post-consumer plastics. The atomic information and molecular information of polyethylene terephthalate, polyethylene, polypropylene, and polystyrene were studied using plasma emission spectra and scattered signal obtained in the LIBS and Raman technique, respectively. The collected spectral features of the samples were analyzed using statistical tools (principal component analysis, Mahalanobis distance) to categorize the plastics. The analyses of the data clearly show that elemental information and molecular information obtained from these techniques are efficient for classification of plastics. In addition, the molecular information collected via Raman spectroscopy exhibits clearly distinct features for the transparent plastics (100% discrimination), whereas the LIBS technique shows better spectral feature differences for the colored samples. The study shows that the information obtained from these complementary techniques allows the complete classification of the plastic samples, irrespective of the color or additives. This work further throws some light on the fact that the potential limitations of any of these techniques for sample identification can be overcome by the complementarity of these two techniques. Graphical Abstract ᅟ.

  2. [Influence of Spectral Pre-Processing on PLS Quantitative Model of Detecting Cu in Navel Orange by LIBS].

    Science.gov (United States)

    Li, Wen-bing; Yao, Lin-tao; Liu, Mu-hua; Huang, Lin; Yao, Ming-yin; Chen, Tian-bing; He, Xiu-wen; Yang, Ping; Hu, Hui-qin; Nie, Jiang-hui

    2015-05-01

    Cu in navel orange was detected rapidly by laser-induced breakdown spectroscopy (LIBS) combined with partial least squares (PLS) for quantitative analysis, then the effect on the detection accuracy of the model with different spectral data ptetreatment methods was explored. Spectral data for the 52 Gannan navel orange samples were pretreated by different data smoothing, mean centralized and standard normal variable transform. Then 319~338 nm wavelength section containing characteristic spectral lines of Cu was selected to build PLS models, the main evaluation indexes of models such as regression coefficient (r), root mean square error of cross validation (RMSECV) and the root mean square error of prediction (RMSEP) were compared and analyzed. Three indicators of PLS model after 13 points smoothing and processing of the mean center were found reaching 0. 992 8, 3. 43 and 3. 4 respectively, the average relative error of prediction model is only 5. 55%, and in one word, the quality of calibration and prediction of this model are the best results. The results show that selecting the appropriate data pre-processing method, the prediction accuracy of PLS quantitative model of fruits and vegetables detected by LIBS can be improved effectively, providing a new method for fast and accurate detection of fruits and vegetables by LIBS.

  3. Investigation of non-uniformity and inclusions in 6LiInSe2 utilizing laser induced breakdown spectroscopy (LIBS)

    Science.gov (United States)

    Wiggins, Brenden; Tupitsyn, Eugene; Bhattacharya, Pijush; Rowe, Emmanuel; Lukosi, Eric; Chvala, Ondrej; Burger, Arnold; Stowe, Ashley

    2013-09-01

    Impurity analysis and compositional distribution studies have been conducted on a crystal of LiInSe2, a compound semiconductor which recently has been shown to respond to ionizing radiation. IR microscopy and laser induced breakdown spectroscopy (LIBS) revealed the presence of inclusions within the crystal lattice. These precipitates were revealed to be alkali and alkaline earth elemental impurities with non-uniform spatial distribution in the crystal. LIBS compositional maps correlate the presence of these impurities with visual color differences in the crystal as well as a significant shift of the band gap. Further, LIBS revealed variation in the ratio of I-III-VI2 elemental constituents throughout the crystal. Analysis of compositional variation and impurities will aid in discerning optimal synthesis and crystal growth parameters to maximize the mobility-lifetime product and charge collection efficiency in the LiInSe2 crystal. Preliminary charge trapping calculations have also been conducted with the Monte Carlo N-particle eXtended (MCNPx) package indicating preferential trapping of holes during irradiation with thermal neutrons.

  4. Effect of applied voltage and inter-pulse delay in spark-assisted LIBS

    Science.gov (United States)

    Robledo-Martinez, A.; Sobral, H.; Garcia-Villarreal, A.

    2018-06-01

    We report the results obtained in an investigation on the effect of the time delay between the laser and electrical pulses in a spark-assisted laser-induced breakdown spectroscopy (LIBS) experiment. The electrical discharge is produced by the discharge of a charged coaxial cable. This arrangement produces a fast unipolar current pulse (500 ns) that applies high power ( 600 kW) to the laser ablation plasma. The delay between the laser pulse and the electric pulse can be controlled at will in order to find the optimal time in terms of enhancement of the emitted lines. It was found that the application of the high voltage pulse enhances the ionic lines emitted by up to two orders of magnitude. An additional enhancement by a factor of 2-4 can be obtained delaying the application of the electric pulse by a time of 0.6-20 μs. In the tests it was noticed that the ionic lines were found to be clearly responsive to increments in the applied electric energy while the neutral lines did so marginally. Our results show that the intensification of the lines is mainly due to reheating of the ablation plasma as the application of the electrical pulse increments the temperature of the ablation plasma by about 50%. It is demonstrated that the present technique is an efficient way of intensifying the lines emitted without incurring in additional damage to the sample.

  5. Reconstructing Ancient Egyptian Diet through Bone Elemental Analysis Using LIBS (Qubbet el Hawa Cemetery

    Directory of Open Access Journals (Sweden)

    Ghada Darwish Al-Khafif

    2015-01-01

    Full Text Available One of the most important advantages of LIBS that make it suitable for the analysis of archeological materials is that it is a quasi-nondestructive technique. Archeological mandibles excavated from Qubbet el Hawa Cemetery, Aswan, were subjected to elemental analysis in order to reconstruct the dietary patterns of the middle class of the Aswan population throughout three successive eras: the First Intermediate Period (FIP, the Middle Kingdom (MK, and the Second Intermediate Period (SIP. The bone Sr/Ca and Ba/Ca ratios were significantly correlated, so the Sr/Ca ratios are considered to represent the ante-mortem values. It was suggested that the significantly low FIP Sr/Ca compared to that of both the MK and the SIP was attributed to the consumption of unusual sorts of food and imported cereals during years of famine, while the MK Sr/Ca was considered to represent the amelioration of climatic, social, economic, and political conditions in this era of state socialism. The SIP Sr/Ca, which is nearly the same as that of the MK, was considered to be the reflection of the continuity of the individualism respect and state socialism and a reflection of agriculture conditions amelioration under the reign of the 17th Dynasty in Upper Egypt.

  6. Reliable classification of moving waste materials with LIBS in concrete recycling.

    Science.gov (United States)

    Xia, Han; Bakker, M C M

    2014-03-01

    Effective discrimination between different waste materials is of paramount importance for inline quality inspection of recycle concrete aggregates from demolished buildings. The moving targeted materials in the concrete waste stream are wood, PVC, gypsum block, glass, brick, steel rebar, aggregate and cement paste. For each material, up to three different types were considered, while thirty particles of each material were selected. Proposed is a reliable classification methodology based on integration of the LIBS spectral emissions in a fixed time window, starting from the deployment of the laser shot. PLS-DA (multi class) and the hybrid combination PCA-Adaboost (binary class) were investigated as efficient classifiers. In addition, mean centre and auto scaling approaches were compared for both classifiers. Using 72 training spectra and 18 test spectra per material, each averaged by ten shots, only PLS-DA achieved full discrimination, and the mean centre approach made it slightly more robust. Continuing with PLS-DA, the relation between data averaging and convergence to 0.3% average error was investigated using 9-fold cross-validations. Single-shot PLS-DA presented the highest challenge and most desirable methodology, which converged with 59 PC. The degree of success in practical testing will depend on the quality of the training set and the implications of the possibly remaining false positives. © 2013 Published by Elsevier B.V.

  7. LIBS, Raman spectroscopy, and optical microscopy analyses of superficial encrustations on ancient tesserae in Lebanon

    Science.gov (United States)

    Tomkowska, Anna; Chmielewski, Krzysztof; Skrzyczanowski, Wojciech; Mularczyk-Oliwa, Monika; Ostrowski, Roman; Strzelec, Marek

    2017-07-01

    The aim of research was determination of composition and nature of superficial deposits, cumulated at the selected mosaic's tesserae from Lebanon. Selected were three series of objects from different locations, namely from the seaside and mountain archaeological sites as well as from the mosaics exposed in the city center. Analyzed were stone and ceramic tesserae. The selection of objects was dictated by wide diversification of factors influencing the state of preservation and composition of deposits in given location. Investigations were performed including LIBS, FT-IR, Raman spectroscopy and optical 3D microscopy. The experimental results included composition and kind of deposit at the tesserae surfaces, and composition of tesserae itself. Compounds in the superficial deposits were identified. Confirmed was occurrence of different encrustations in dependence on geographic localization of a given sample. The interpretation of results was supported by multivariate statistical techniques, especially by the factor analysis. Performed analyses constitute the pioneer realization in terms of determination of deposits composition at the surface of mosaics from the Lebanon territory.

  8. lib and data: a new way of inhabiting the city

    Directory of Open Access Journals (Sweden)

    Dominique Boullier

    2014-01-01

    Full Text Available The Vélib bike rental system is worth analyzing in order to understand how cities move out of a model of large infrastructures towards a personal service principle connected to digital traceability and mapping of all activities. The new offer of bikes distributed all over the city creates a new map for access to mobility resources while introducing citizens to a “personal-public” device. Each feature of the system requires a very well designed information system to match the needs for bikes and to charge the users through cards (credit or transportation cards. Personal data is the essential entity that fuels the whole system and that creates potential privacy problems as well as monetization opportunities. The paper relies on a theoretical framework, called habitele, which accounts for the process of inhabiting that is now extended to the personal data ecosystem. The portability of mobile phones (and other devices such as cards creates an envelope that follows the urban citizen and equips all his activities while it makes a new layer of the city appear, adapted to the personal involvement in the urban environment

  9. KITAB AL-SANĪ AL-MAṬĀLIB: INTERKONEKSI NAHWU DAN TASAWUF

    Directory of Open Access Journals (Sweden)

    Zakiyah Zakiyah

    2012-12-01

    Tulisan ini mereview buku yang berjudul al-Sanī al-Maṭālib yang ditulis oleh Kiai Nur Iman Mlangi Yogyakarta. Buku ini ditulis dalam bahasa Arab yang me­ngandung interkoneksi antara ilmu Nahwu (tata bahasa Arab dengan mis­tisis­me. Buku ini sangat menarik karena kenyataan bahwa kedua pengetahuan tersebut memiliki aturan sendiri-sendiri. Selain itu, sangat sedikit penulis yang menulis dengan gaya seperti itu. Salah satunya adalah Syaikh Abdul Qadir bin Ahmad al-Kuhany dengan karyanya yang berjudul Manniyat al-Fāqir al-Munjarid wa Sayrat al-Murīd al-Mutafarrid. Buku al-Saniy al-Muthalib diduga telah ditulis pada akhir abad ke-18 atau awal abad ke-19, menurut periode kehidupan Kiai Nur Iman yaitu sekitar pertengahan abad ke-18. Aturan Nahwu dalam buku ini dijelaskan secara teosofi yang dimulai dengan penjelasan mengenai tauhid (keesaan Tuhan sebagai kajian dasar bagi orang Islam, yang diikuti dengan makna dari masing-masing aturan bahasa Arab dalam aspek mistiknya.

  10. Analysis of heterogeneous gallstones using laser-induced breakdown spectroscopy (LIBS) and wavelength dispersive X-ray fluorescence (WD-XRF).

    Science.gov (United States)

    Jaswal, Brij Bir S; Kumar, Vinay; Sharma, Jitendra; Rai, Pradeep K; Gondal, Mohammed A; Gondal, Bilal; Singh, Vivek K

    2016-04-01

    Laser-induced breakdown spectroscopy (LIBS) is an emerging analytical technique with numerous advantages such as rapidity, multi-elemental analysis, no specific sample preparation requirements, non-destructiveness, and versatility. It has been proven to be a robust elemental analysis tool attracting interest because of being applied to a wide range of materials including biomaterials. In this paper, we have performed spectroscopic studies on gallstones which are heterogeneous in nature using LIBS and wavelength dispersive X-ray fluorescence (WD-XRF) techniques. It has been observed that the presence and relative concentrations of trace elements in different kind of gallstones (cholesterol and pigment gallstones) can easily be determined using LIBS technique. From the experiments carried out on gallstones for trace elemental mapping and detection, it was found that LIBS is a robust tool for such biomedical applications. The stone samples studied in the present paper were classified using the Fourier transform infrared (FTIR) spectroscopy. WD-XRF spectroscopy has been applied for the qualitative and quantitative analysis of major and trace elements present in the gallstone which was compared with the LIBS data. The results obtained in the present paper show interesting prospects for LIBS and WD-XRF to study cholelithiasis better.

  11. Direct measurements of sample heating by a laser-induced air plasma in pre-ablation spark dual-pulse laser-induced breakdown spectroscopy (LIBS).

    Science.gov (United States)

    Register, Janna; Scaffidi, Jonathan; Angel, S Michael

    2012-08-01

    Direct measurements of temperature changes were made using small thermocouples (TC), placed near a laser-induced air plasma. Temperature changes up to ~500 °C were observed. From the measured temperature changes, estimates were made of the amount of heat absorbed per unit area. This allowed calculations to be made of the surface temperature, as a function of time, of a sample heated by the air plasma that is generated during orthogonal pre-ablation spark dual-pulse (DP) LIBS measurements. In separate experiments, single-pulse (SP) LIBS emission and sample ablation rate measurements were performed on nickel at sample temperatures ranging from room temperature to the maximum surface temperature that was calculated using the TC measurement results (500 °C). A small, but real sample temperature-dependent increase in both SP LIBS emission and the rate of sample ablation was found for nickel samples heated up to 500 °C. Comparison of DP LIBS emission enhancement values for bulk nickel samples at room temperature versus the enhanced SP LIBS emission and sample ablation rates observed as a function of increasing sample temperature suggests that sample heating by the laser-induced air plasma plays only a minor role in DP LIBS emission enhancement.

  12. Multi-Pulse Excitation for Underwater Analysis of Copper-Based Alloys Using a Novel Remote Laser-Induced Breakdown Spectroscopy (LIBS) System.

    Science.gov (United States)

    Guirado, Salvador; Fortes, Francisco J; Laserna, J Javier

    2016-04-01

    In this work, the use of multi-pulse excitation has been evaluated as an effective solution to mitigate the preferential ablation of the most volatile elements, namely Sn, Pb, and Zn, observed during laser-induced breakdown spectroscopy (LIBS) analysis of copper-based alloys. The novel remote LIBS prototype used in this experiments featured both single-pulse (SP-LIBS) and multi-pulse excitation (MP-LIBS). The remote instrument is capable of performing chemical analysis of submersed materials up to a depth of 50 m. Laser-induced breakdown spectroscopy analysis was performed at air pressure settings simulating the conditions during a real subsea analysis. A set of five certified bronze standards with variable concentration of Cu, As, Sn, Pb, and Zn were used. In SP-LIBS, signal emission is strongly sensitive to ambient pressure. In this case, fractionation effect was observed. Multi-pulse excitation circumvents the effect of pressure over the quantitative analysis, thus avoiding the fractionation phenomena observed in single pulse LIBS. The use of copper as internal standard minimizes matrix effects and discrepancies due to variation in ablated mass. © The Author(s) 2016.

  13. Homogeneity testing and quantitative analysis of manganese (Mn in vitrified Mn-doped glasses by laser-induced breakdown spectroscopy (LIBS

    Directory of Open Access Journals (Sweden)

    V. K. Unnikrishnan

    2014-09-01

    Full Text Available Laser-induced breakdown spectroscopy (LIBS, an atomic emission spectroscopy method, has rapidly grown as one of the best elemental analysis techniques over the past two decades. Homogeneity testing and quantitative analysis of manganese (Mn in manganese-doped glasses have been carried out using an optimized LIBS system employing a nanosecond ultraviolet Nd:YAG laser as the source of excitation. The glass samples have been prepared using conventional vitrification methods. The laser pulse irradiance on the surface of the glass samples placed in air at atmospheric pressure was about 1.7×109 W/cm2. The spatially integrated plasma emission was collected and imaged on to the spectrograph slit using an optical-fiber-based collection system. Homogeneity was checked by recording LIBS spectra from different sites on the sample surface and analyzing the elemental emission intensities for concentration determination. Validation of the observed LIBS results was done by comparison with scanning electron microscope- energy dispersive X-ray spectroscopy (SEM-EDX surface elemental mapping. The analytical performance of the LIBS system has been evaluated through the correlation of the LIBS determined concentrations of Mn with its certified values. The results are found to be in very good agreement with the certified concentrations.

  14. Development of a compact underwater laser-induced breakdown spectroscopy (LIBS) system and preliminary results in sea trials.

    Science.gov (United States)

    Guo, Jinjia; Lu, Yuan; Cheng, Kai; Song, Jiaojian; Ye, Wangquan; Li, Nan; Zheng, Ronger

    2017-10-10

    The exploitation and research of deep-sea hydrothermal vent has been an issue of great interest in ocean research in recent years. Laser-induced breakdown spectroscopy (LIBS) has great potential for ocean application due to the capabilities of stand-off, multiphase, and multielement analysis. In this work, a newly developed compact 4000 m rated LIBS system (LIBSea) is introduced with preliminary results of sea trials. The underwater system consists of an Nd:YAG single-pulsed laser operating at 1064 nm, an optical fiber spectrometer, an optics module, and an electronic controller module. The whole system is housed in an L800  mm×ϕ258  mm pressure housing with an optical window on the end cap. It was deployed on the remote operated vehicle Faxian on the research vessel Kexue, and in June 2015 was successfully applied for hydrothermal field measurements at the Manus area. The obtained results are shown that the LIBS system is capable of detecting elements Li, Na, K, Ca, and Mg in the hydrothermal area. Profiles of LIBS signals of elements K and Ca have also been obtained during the sea trial. The results show that the K emission line is gradually broadened with depth from sea surface to sea floor (1800 m or so); the K intensity shows a hump shape with maximum value at about 1050 m. The Ca emission line is rapidly broadened below 400 m and slowly narrowed to the sea floor; the Ca intensity shows no obvious change below 400 m and increases continuously to sea floor. A very interesting finding is that the small fluctuations of intensity profile curve of Ca show a degree of correlation with seawater temperature change. The sea trial results prove the performance of LIBSea. After further optimization, it is hoped to apply the LIBS system to the in situ mineral deposits and hydrothermal vent fluid detection in deep sea.

  15. Superhumps linked to X-ray emission. The superoutbursts of SSS J122221.7-311525 and GW Lib

    Science.gov (United States)

    Neustroev, V. V.; Page, K. L.; Kuulkers, E.; Osborne, J. P.; Beardmore, A. P.; Knigge, C.; Marsh, T.; Suleimanov, V. F.; Zharikov, S. V.

    2018-03-01

    Context. We present more than 4 years of Swift X-ray observations of the 2013 superoutburst, subsequent decline and quiescence of the WZ Sge-type dwarf nova SSS J122221.7-311525 (SSS J122222) from 6 days after discovery. Aims: Only a handful of WZ Sge-type dwarf novae have been observed in X-rays, and until recently GW Lib was the only binary of this type with complete coverage of an X-ray light curve throughout a superoutburst. We collected extensive X-ray data of a second such system to understand the extent to which the unexpected properties of GW Lib are common to the WZ Sge class. Methods: We collected 60 Swift-XRT observations of SSS J122222 between 2013 January 6 and 2013 July 1. Four follow-up observations were performed in 2014, 2015, 2016 and 2017. The total exposure time of our observations is 86.6 ks. We analysed the X-ray light curve and compared it with the behaviour of superhumps which were detected in the optical light curve. We also performed spectral analysis of the data. The results were compared with the properties of GW Lib, for which new X-ray observations were also obtained. Results: SSS J122222 was variable and around five times brighter in 0.3-10 keV X-rays during the superoutburst than in quiescence, mainly because of a significant strengthening of a high-energy component of the X-ray spectrum. The post-outburst decline of the X-ray flux lasted at least 500 d. The data show no evidence of the expected optically thick boundary layer in the system during the outburst. SSS J122222 also exhibited a sudden X-ray flux change in the middle of the superoutburst, which occurred exactly at the time of the superhump stage transition. A similar X-ray behaviour was also detected in GW Lib. Conclusions: We show that the X-ray flux exhibits changes at the times of changes in the superhump behaviour of both SSS J122222 and GW Lib. This result demonstrates a relationship between the outer disc and the white dwarf boundary layer for the first time, and

  16. Revealing the secrets of African annonaceae : systematics, evolution and biogeography of the syncarpous genera Isolona and Monodora

    NARCIS (Netherlands)

    Couvreur, T.L.P.

    2008-01-01

    The goal of this PhD project was to study the evolution, systematics and biogeography of two African genera from the pan-tropical Annonaceae family: Isolona and Monodora. Both genera are unique within the family in that the female reproductive parts (or carpels) are fused into a single unit. All

  17. Hepatozoon infection prevalence in four snake genera: influence of diet, prey parasitemia levels, or parasite type?

    Science.gov (United States)

    Tomé, Beatriz; Maia, João P M C; Harris, D James

    2012-10-01

    Hepatozoon spp. (Apicomplexa: Haemogregarinidae) are the most commonly reported hemoparasites from snakes. Of over 300 Hepatozoon species identified, more than 120 were described from snakes. However, recent genetic assessments have found Hepatozoon lineages recovered from both prey and predators, indicating that diet may play an important role in the infection of final vertebrate hosts. Here 4 different snake genera with different diets were assessed. Hepatozoon spp. prevalence varied greatly between the genera, but only lineages already identified from potential prey, i.e., gecko and lacertid lizards, were recovered from the snakes. Interestingly, the Hepatozoon spp. lineage known from geckos was the most common in the snakes, but this does not reflect their diet. Higher parasitemia levels, reported for some geckos relative to lacertid lizards, may play a role. Alternatively, this lineage may be more effective at parasitizing snakes or may occur, despite being unrecorded, in other vertebrate groups consumed by snakes.

  18. Effect of Conway Medium and f/2 Medium on the growth of six genera of South China Sea marine microalgae.

    Science.gov (United States)

    Lananan, Fathurrahman; Jusoh, Ahmad; Ali, Nora'aini; Lam, Su Shiung; Endut, Azizah

    2013-08-01

    A study was performed to determine the effect of Conway and f/2 media on the growth of microalgae genera. Genera of Chlorella sp., Dunaliella sp., Isochrysis sp., Chaetoceros sp., Pavlova sp. and Tetraselmis sp. were isolated from the South China Sea. During the cultivation period, the density of cells were determined using Syringe Liquid Sampler Particle Measuring System (SLS-PMS) that also generated the population distribution curve based on the size of the cells. The population of the microalgae genera is thought to consist of mother and daughter generations since these microalgae genera reproduce by releasing small non-motile reproductive cells (autospores). It was found that the reproduction of Tetraselmis sp., Dunaliella sp. and Pavlova sp. could be sustained longer in f/2 Medium. Higher cell density was achieved by genus Dunaliella, Chlorella and Isochrysis in Conway Medium. Different genera of microalgae had a preference for different types of cultivation media. Copyright © 2013 Elsevier Ltd. All rights reserved.

  19. Palynological study of the genera Ruellia, Ecbolium, Asystasia, Blepharis and Dicliptera (Acanthaceae) of Yemen

    Science.gov (United States)

    Al-Hakimi, S. Anisa; Maideen, Haja; Latiff, A.

    2013-11-01

    Pollen morphology of five genera of the family Acanthaceae, namely Ruellia, Blepharis, Asystasia, Ecbolium and Dicliptera (Acanthaceae) of Yemen has been examined using light and scanning electron microscope. Pollen descriptions were provided with two shapes distinguished, spheroidal and prolate. Most of the pollen grains were tricolporate amd psuedocolpi except those of Blepharis which are colpate. The surface is coarsely reticulate, in addition to the lumina that varies in size.

  20. Palynological study of the genera Ruellia, Ecbolium, Asystasia, Blepharis and Dicliptera (Acanthaceae) of Yemen

    Energy Technology Data Exchange (ETDEWEB)

    Al-Hakimi, S. Anisa [School of Environmental and Natural Resource Sciences, Faculty of Science and Technology, Universiti Kebangsaan Malaysia, 43600, Bangi, Selangor, Malaysia and Biology Department, Faculty of Science, Taiz University, Taiz (Yemen); Maideen, Haja; Latiff, A. [School of Environmental and Natural Resource Sciences, Faculty of Science and Technology, Universiti Kebangsaan Malaysia, 43600, Bangi, Selangor (Malaysia)

    2013-11-27

    Pollen morphology of five genera of the family Acanthaceae, namely Ruellia, Blepharis, Asystasia, Ecbolium and Dicliptera (Acanthaceae) of Yemen has been examined using light and scanning electron microscope. Pollen descriptions were provided with two shapes distinguished, spheroidal and prolate. Most of the pollen grains were tricolporate amd psuedocolpi except those of Blepharis which are colpate. The surface is coarsely reticulate, in addition to the lumina that varies in size.

  1. Morphology, ecology and phylogeny of cyanobacteria belonging to genera Nostoc and Desmonostoc in Lithuania

    OpenAIRE

    Špakaitė, Ina

    2014-01-01

    The aim of the study was to investigate the morphology, ecology and phylogeny of cyanobacteria belonging to genera Nostoc and Desmonostoc in Lithuania. The detailed research of freshwater and terrestrial Nostoc and Desmonostoc species provided new data on taxonomy, biology and ecology of these cyanobacteria and the overall diversity of algae in Lithuania. 20 Nostoc species and two intraspecific taxa, and 18 taxa to the Nostoc genus level were identified. Twelve Nostoc species and intraspecifi...

  2. The Genera of Fungi: fixing the application of type species of generic names.

    Science.gov (United States)

    Crous, Pedro W; Giraldo, Alejandra; Hawksworth, David L; Robert, Vincent; Kirk, Paul M; Guarro, Josep; Robbertse, Barbara; Schoch, Conrad L; Damm, Ulrike; Trakunyingcharoen, Thippawan; Groenewald, Johannes Z

    2014-06-01

    To ensure a stable platform for fungal taxonomy, it is of paramount importance that the genetic application of generic names be based on their DNA sequence data, and wherever possible, not morphology or ecology alone. To facilitate this process, a new database, accessible at www.GeneraofFungi.org (GoF) was established, which will allow deposition of metadata linked to holo-, lecto-, neo- or epitype specimens, cultures and DNA sequence data of the type species of genera. Although there are presently more than 18 000 fungal genera described, we aim to initially focus on the subset of names that have been placed on the "Without-prejudice List of Protected Generic Names of Fungi" (see IMA Fungus 4(2): 381-443, 2013). To enable the global mycological community to keep track of typification events and avoid duplication, special MycoBank Typification identfiers (MBT) will be issued upon deposit of metadata in MycoBank. MycoBank is linked to GoF, thus deposited metadata of generic type species will be displayed in GoF (and vice versa), but will also be linked to Index Fungorum (IF) and the curated RefSeq Targeted Loci (RTL) database in GenBank at the National Center for Biotechnology Information (NCBI). This initial paper focuses on eight genera of appendaged coelomycetes, the type species of which are neo- or epitypified here: Bartalinia (Bartalinia robillardoides; Amphisphaeriaceae, Xylariales), Chaetospermum (Chaetospermum chaetosporum, incertae sedis, Sebacinales), Coniella (Coniella fragariae, Schizoparmaceae, Diaporthales), Crinitospora (Crinitospora pulchra, Melanconidaceae, Diaporthales), Eleutheromyces (Eleutheromyces subulatus, Helotiales), Kellermania (Kellermania yuccigena, Planistromataceae, Botryosphaeriales), Mastigosporium (Mastigosporium album, Helotiales), and Mycotribulus (Mycotribulus mirabilis, Agaricales). Authors interested in contributing accounts of individual genera to larger multi-authored papers to be published in IMA Fungus, should contact the

  3. Studies on bioaccumulation of 152Eu, 137Cs, 60Co by different algal genera

    International Nuclear Information System (INIS)

    Saha, A.K.; Chakraborty, N.; Pal, R.; Nayak, Dalia; Lahiri, Susanta

    2006-01-01

    In the present paper, the bioaccumulation of a mixture of potentially hazardous, long lived radionuclides 152 Eu, 137 Cs and 60 Co by five algal genera of three different family, viz.: Lyngbya and Phormidium from cyanophyceae; Phizoclonium and Chaetomorpha from chlorophyceae and Catenella from rhodophyceae have been studied. Because of the long half life and high solubility, these radionuclides are considered the most hazardous in the nuclear spent fuel

  4. Revision of the stiletto fly genera Acupalpa Kröber and Pipinnipons Winterton (Diptera, Therevidae, Agapophytinae using cybertaxonomic methods, with a key to Australasian genera

    Directory of Open Access Journals (Sweden)

    Shaun Winterton

    2011-05-01

    Full Text Available Australian stiletto flies of the sister-genera Acupalpa Kröber, 1912 and Pipinnipons Winterton, 2001 (Diptera: Therevidae: Agapophytinae are revised. Twelve new species of Acupalpa are described, while Acupalpa imitans (White, 1915, comb. n. is transferred from Pipinnipons and Acupalpa albimanis (Kröber, 1914, comb. n. is transferred from Ectinorhynchus Macquart as a senior synonym of Acupalpa pollinosa Mann. The total number of species of Acupalpa is therefore increased to 19: A. albimanis (Kröber, comb. n., A. albitarsa Mann, A. boharti sp. n., A. divisa (Walker, A. dolichorhyncha sp. n., A. glossa sp. n., A. imitans (White, comb. n., A. irwini Winterton, A. melanophaeos sp. n., A. miaboolya sp. n., A. minuta sp. n., A. minutoides sp. n., A. notomelas sp. n., A. novayamarna sp. n., A. rostrata Kröber, A. semirufa Mann, A. westralica sp. n., A. yalgoo sp. n. and A. yanchep sp. n. Three new species of Pipinnipons are described, increasing the total number of species to five: P. chauncyvallis sp. n., P. fascipennis (Kröber, P. kampmeierae sp. n., P. kroeberi Winterton, and P. sphecoda sp. n. Pipinnipons and Acupalpa are rediagnosed in light of the new species presented herein and revised keys to species are included. A dichotomous key to genera of Australasian Therevidae is included. As an empirical example of cybertaxonomy, taxonomic descriptions were composed using a character matrix developed in Lucid Builder (in Structured Descriptive Data (SDD format to generate natural language descriptions supplemented by online specimen and image databases. Web resources are provided throughout the document including: a links to high resolution colour images of all species on Morphbank, b registration of authors, publications, taxon names and other nomenclatural acts in Zoobank, with assignment of Life Science Identifiers (LSIDs for each, c links to Genbank accession records for DNA sequences, and d assignment of LSIDs to specimen records with links

  5. Kalapuya brunnea gen. & sp. nov. and its relationship to the other sequestrate genera in Morchellaceae.

    Science.gov (United States)

    Trappe, Matthew J; Trappe, James M; Bonito, Gregory M

    2010-01-01

    Kalapuya is described as a new, monotypic truffle genus in the Morchellaceae known only from the Pacific northwestern United States. Its relationship to other hypogeous genera within Morchellaceae is explored by phylogenetic analysis of the ribosomal LSU and EF1alpha protein coding region. The type species, K. brunnea, occurs in Douglas-fir forests up to about 50 y old on the west slope of the Cascade Range in Oregon and in the Coastal Ranges of Oregon and northern California. It has a roughened, warty, reddish brown to brown peridium, a solid whitish gleba that develops grayish brown mottling as the spores mature, and produces a cheesy-garlicky odor at maturity. Its smooth, ellipsoid spores resemble those of Morchella spp. but are much larger. The four hypogeous genera known in the Morchellaceae, Kalapuya, Fischerula, Imaia and Leucangium, are distinct from the epigeous genera Morchella and Verpa, but it is uncertain whether they resulted from a single transition to a hypogeous fruiting habit or from multiple independent transitions. Kalapuya, locally known as the Oregon brown truffle, has been commercially harvested for culinary use.

  6. Environmental niche conservatism explains the accumulation of species richness in Mediterranean-hotspot plant genera.

    Science.gov (United States)

    Skeels, Alexander; Cardillo, Marcel

    2017-03-01

    The causes of exceptionally high plant diversity in Mediterranean-climate biodiversity hotspots are not fully understood. We asked whether a mechanism similar to the tropical niche conservatism hypothesis could explain the diversity of four large genera (Protea, Moraea, Banksia, and Hakea) with distributions within and adjacent to the Greater Cape Floristic Region (South Africa) or the Southwest Floristic Region (Australia). Using phylogenetic and spatial data we estimated the environmental niche of each species, and reconstructed the mode and dynamics of niche evolution, and the geographic history, of each genus. For three genera, there were strong positive relationships between the diversity of clades within a region and their inferred length of occupation of that region. Within genera, there was evidence for strong evolutionary constraint on niche axes associated with climatic seasonality and aridity, with different niche optima for hotspot and nonhotspot clades. Evolutionary transitions away from hotspots were associated with increases in niche breadth and elevated rates of niche evolution. Our results point to a process of "hotspot niche conservatism" whereby the accumulation of plant diversity in Mediterranean-type ecosystems results from longer time for speciation, with dispersal away from hotspots limited by narrow and phylogenetically conserved environmental niches. © 2017 The Author(s). Evolution © 2017 The Society for the Study of Evolution.

  7. Dioecy does not consistently accelerate or slow lineage diversification across multiple genera of angiosperms.

    Science.gov (United States)

    Sabath, Niv; Goldberg, Emma E; Glick, Lior; Einhorn, Moshe; Ashman, Tia-Lynn; Ming, Ray; Otto, Sarah P; Vamosi, Jana C; Mayrose, Itay

    2016-02-01

    Dioecy, the sexual system in which male and female organs are found in separate individuals, allows greater specialization for sex-specific functions and can be advantageous under various ecological and environmental conditions. However, dioecy is rare among flowering plants. Previous studies identified contradictory trends regarding the relative diversification rates of dioecious lineages vs their nondioecious counterparts, depending on the methods and data used. We gathered detailed species-level data for dozens of genera that contain both dioecious and nondioecious species. We then applied a probabilistic approach that accounts for differential speciation, extinction, and transition rates between states to examine whether there is an association between dioecy and lineage diversification. We found a bimodal distribution, whereby dioecious lineages exhibited higher diversification in certain genera but lower diversification in others. Additional analyses did not uncover an ecological or life history trait that could explain a context-dependent effect of dioecy on diversification. Furthermore, in-depth simulations of neutral characters demonstrated that such bimodality is also found when simulating neutral characters across the observed trees. Our analyses suggest that - at least for these genera with the currently available data - dioecy neither consistently places a strong brake on diversification nor is a strong driver. © 2015 The Authors. New Phytologist © 2015 New Phytologist Trust.

  8. Determination of Metal Elements in Wine Using Laser-Induced Breakdown Spectroscopy (LIBS).

    Science.gov (United States)

    Bocková, Jana; Tian, Ye; Yin, Hualiang; Delepine-Gilon, Nicole; Chen, Yanping; Veis, Pavel; Yu, Jin

    2017-08-01

    We developed a method for sensitive elemental analysis of wines using laser-induced breakdown spectroscopy (LIBS). In order to overcome the inefficiency of direct ablation of bulk wine (an organic liquid), a thin layer of wine residue was prepared on a metallic target according to an appropriated heating procedure applied to an amount of liquid wine dropped on the target surface. The obtained ensemble was thus ablated. Such a sample preparation procedure used a very small volume of 2 mL of wine and took only 30 min without reagent or solvent. The results show the detection of tens of metal and non-metal elements including majors (Na, Mg, K, Ca), minors, and traces (Li, B, Si, P, Ti, Mn, Fe, Cu, Zn, Rb, Sr, Ba, and Pb) in wines purchased from local supermarkets and from different production places in France. Commercially available wines were then spiked with certified standard solutions of Ti and Fe. Three series of laboratory reference samples were thus prepared using three different wines (a red wine and a white wine from a same production region and a red wine from another production region) with concentrations of Ti and Fe in the range of 1-40 mg/L. Calibration graphs established with the spiked samples allowed extracting the figures-of-merit parameters of the method for wine analysis such as the coefficient of determination ( R 2 ) and the limits of detection and quantification (LOD and LOQ). The calibration curves built with the three wines were then compared. We studied the residual matrix effect between these wines in the determination of the concentrations of Ti and Fe.

  9. 2D evaluation of spectral LIBS data derived from heterogeneous materials using cluster algorithm

    Science.gov (United States)

    Gottlieb, C.; Millar, S.; Grothe, S.; Wilsch, G.

    2017-08-01

    Laser-induced Breakdown Spectroscopy (LIBS) is capable of providing spatially resolved element maps in regard to the chemical composition of the sample. The evaluation of heterogeneous materials is often a challenging task, especially in the case of phase boundaries. In order to determine information about a certain phase of a material, the need for a method that offers an objective evaluation is necessary. This paper will introduce a cluster algorithm in the case of heterogeneous building materials (concrete) to separate the spectral information of non-relevant aggregates and cement matrix. In civil engineering, the information about the quantitative ingress of harmful species like Cl-, Na+ and SO42- is of great interest in the evaluation of the remaining lifetime of structures (Millar et al., 2015; Wilsch et al., 2005). These species trigger different damage processes such as the alkali-silica reaction (ASR) or the chloride-induced corrosion of the reinforcement. Therefore, a discrimination between the different phases, mainly cement matrix and aggregates, is highly important (Weritz et al., 2006). For the 2D evaluation, the expectation-maximization-algorithm (EM algorithm; Ester and Sander, 2000) has been tested for the application presented in this work. The method has been introduced and different figures of merit have been presented according to recommendations given in Haddad et al. (2014). Advantages of this method will be highlighted. After phase separation, non-relevant information can be excluded and only the wanted phase displayed. Using a set of samples with known and unknown composition, the EM-clustering method has been validated regarding to Gustavo González and Ángeles Herrador (2007).

  10. LibQUAL+® and the Information Commons Initiative at Buffalo State College: 2003 to 2009

    Directory of Open Access Journals (Sweden)

    Eugene J. Harvey

    2013-06-01

    Full Text Available Objective – To examine the effect of a transition to an information commons model of service organization on perceptions of library service quality. In 2003, the E. H. Butler Library at Buffalo State College began development of an Information Commons, which included moving the computing help desk to the library, reorganizing the physical units in the library around functional service areas, and moving the reference desk to the lobby.Methods – In 2003, 2006, and 2009, the library administered the LibQUAL+ survey, which measures the relationship between perceived library service delivery and library user satisfaction. The 2003 survey was conducted before the implementation of the Information Commons Initiative. Analyses of variance were conducted to compare the effect of the service changes on users’ perceptions of library service quality between the three data collection points, as well as to explore differences between undergraduate and graduate students. Results – The analyses revealed significant differences between the three data points, with significantly more positive perceptions of library service quality in 2006 and 2009 than in 2003. Comparisons between 2006 and 2009 were not statistically significant. In 2003, no significant differences were found between undergraduate and graduate students’ perceptions. However, in 2006, undergraduate students perceived higher levels of service quality after the development of the Information Commons than graduate students. This difference was maintained in 2009.Conclusion – The Information Commons has become a popular place for new programming, exhibits, workshops, and cultural events on campus. The library staff and administration have regained the respect of the campus community, as well as an appreciation for user-driven input and feedback and for ongoing assessment and evaluation.

  11. Symbioses with nitrogen-fixing bacteria: nodulation and phylogenetic data across legume genera.

    Science.gov (United States)

    Afkhami, Michelle E; Luke Mahler, D; Burns, Jean H; Weber, Marjorie G; Wojciechowski, Martin F; Sprent, Janet; Strauss, Sharon Y

    2018-02-01

    How species interactions shape global biodiversity and influence diversification is a central - but also data-hungry - question in evolutionary ecology. Microbially based mutualisms are widespread and could cause diversification by ameliorating stress and thus allowing organisms to colonize and adapt to otherwise unsuitable habitats. Yet the role of these interactions in generating species diversity has received limited attention, especially across large taxonomic groups. In the massive angiosperm family Leguminosae, plants often associate with root-nodulating bacteria that ameliorate nutrient stress by fixing atmospheric nitrogen. These symbioses are ecologically-important interactions, influencing community assembly, diversity, and succession, contributing ~100-290 million tons of N annually to natural ecosystems, and enhancing growth of agronomically-important forage and crop plants worldwide. In recent work attempting to determine whether mutualism with N-fixing bacteria led to increased diversification across legumes, we were unable to definitively resolve the relationship between diversification and nodulation. We did, however, succeed in compiling a very large searchable, analysis-ready database of nodulation data for 749 legume genera (98% of Leguminosae genera; LPWG 2017), which, along with associated phylogenetic information, will provide a valuable resource for future work addressing this question and others. For each legume genus, we provide information about the species richness, frequency of nodulation, subfamily association, and topological correspondence with an additional data set of 100 phylogenetic trees curated for database compatibility. We found 386 legume genera were confirmed nodulators (i.e., all species examined for nodulation nodulated), 116 were non-nodulating, four were variable (i.e., containing both confirmed nodulators and confirmed non-nodulators), and 243 had not been examined for nodulation in published studies. Interestingly

  12. The diets of Hispaniolan colubrid snakes : I. Introduction and prey genera.

    Science.gov (United States)

    Henderson, Robert W

    1984-05-01

    Approximately 1590 Hispaniolan colubrid snakes representing six genera and eight species were examined for prey remains (Alsophis cantherigerus, Antillophis parvifrons, Darlingtonia haetiana, Hypsirhynchus ferox, Ialtris dorsalis, Uromacer catesbyi, U. frenatus, and U. oxyrhynchus). The snakes were collected at many localities over a span of 80 years.Of 426 prey items, 77.9% were lizards (of which 69.6% were anoles), 19% frogs, 2.6% birds and mammals, and 0.5% other snakes. Darlingtonia was the only snake that did not exploit lizards; it fed exclusively on Eleutherodactylus frogs, including egg clutches. Disregarding Darlingtonia, there is no size class of Hispaniolan colubrids between 20-90 cm SVL that does not prey primarily on Anolis. Certain prey genera are added to, or deleted from, diets depending on snake size, but the data suggest that snake SVL alone does little to dictate what prey genera (or groups) are eaten. Shannon-Wiener values (H') indicate that Darlingtonia has the narrowest trophic niche, while Alsophis and Ialtris have the widest. Values of H' are not correlated with snake SVL, but highly significant (Peats diurnally active (anoles) and diurnally quiescent (hylid frogs) prey with almost equal frequency.Within Maglio's cantherigerus species assemblage, in which an Alsophis cantherigerus-like snake was ancestral to the other species, and in which longsnouted Uromacer are the most morphologically derived, there is an obvious trend toward trophic specialization on Hispaniola. The West Indies have provided an ideal natural laboratory for the investigation of many aspects of vertebrate ecology, and an arena in which to test theories of island biogeography. The most extensively studied West Indian vertebrates have been the lizards of the iguanid genus Anolis. Conversely, the ecology of West Indian snakes has been largely ignored. This is surprising in light of the fact that much has been written about Anolis predation, but little has been written about

  13. A novel specimen-preparing method using epoxy resin as binding material for LIBS analysis of powder samples.

    Science.gov (United States)

    Shi, Linli; Lin, Qingyu; Duan, Yixiang

    2015-11-01

    In view of the inevitable preprocessing of powder samples for LIBS detection, epoxy resin glue was investigated for the first time as a binder of powder samples due to its superior property of improved performance in laser induced breakdown spectroscopy (LIBS) technique as a quantitative analytical tool. For comparative studies of the epoxy resin and traditional polyethylene (PE) pellets in soil, sample detection, the signal intensities of Fe (I) at 404.58 nm, Ca (I) at 443.57 nm, and Cr (I) at 453.52 nm, were studied and subsequently, the calibration curves for these elements were constructed using the standard samples with variable concentrations. The signal intensities of epoxy resin samples were, on average, about 2 times greater than those obtained with the traditional PE pellet samples. Meanwhile, the resin samples showed better R square values of 0.981, 0.985 and 0.979 for curves of Fe (I) 404.58 nm, Ca (I) 443.57 nm, and Cr (I) 453.52 nm, compared to the 0.974, 0.950 and 0.934, of the PE pellet samples. Furthermore, the former represented lower limits of detection (LOD) for Fe, Ca and Cr. These experimental results indicated that this proposed novel method based on epoxy resin can attach samples of properties of high homogeneity, cohesiveness, smoothness and hardness, which are conducive to system stability, testing accuracy and signal enhancement. This method can make LIBS more practical in powder sample analysis. Copyright © 2015 Elsevier B.V. All rights reserved.

  14. Effect of sodium chloride concentration on elemental analysis of brines by laser-induced breakdown spectroscopy (LIBS).

    Science.gov (United States)

    Goueguel, Christian; Singh, Jagdish P; McIntyre, Dustin L; Jain, Jinesh; Karamalidis, Athanasios K

    2014-01-01

    Leakage of injected carbon dioxide (CO2) or resident fluids, such as brine, is a major concern associated with the injection of large volumes of CO2 into deep saline formations. Migration of brine could contaminate drinking water resources by increasing their salinity or endanger vegetation and animal life as well as human health. The main objective of this study was to investigate the effect of sodium chloride (NaCl) concentration on the detection of calcium and potassium in brine samples using laser-induced breakdown spectroscopy (LIBS). The ultimate goals were to determine the suitability of the LIBS technique for in situ measurements of metal ion concentrations in NaCl-rich solution and to develop a chemical sensor that can provide the early detection of brine intrusion into formations used for domestic or agricultural water production. Several brine samples of NaCl-CaCl2 and NaCl-KCl were prepared at NaCl concentrations between 0.0 and 3.0 M. The effect of NaCl concentration on the signal-to-background ratio (SBR) and signal-to-noise ratio (SNR) for calcium (422.67 nm) and potassium (769.49 nm) emission lines was evaluated. Results show that, for a delay time of 300 ns and a gate width of 3 μs, the presence of and changes in NaCl concentration significantly affect the SBR and SNR for both emission lines. An increase in NaCl concentration from 0.0 to 3.0 M produced an increase in the SNR, whereas the SBR dropped continuously. The detection limits obtained for both elements were in the milligrams per liter range, suggesting that a NaCl-rich solution does not severely limit the ability of LIBS to detect trace amount of metal ions.

  15. libNeuroML and PyLEMS: using Python to combine procedural and declarative modeling approaches in computational neuroscience.

    Science.gov (United States)

    Vella, Michael; Cannon, Robert C; Crook, Sharon; Davison, Andrew P; Ganapathy, Gautham; Robinson, Hugh P C; Silver, R Angus; Gleeson, Padraig

    2014-01-01

    NeuroML is an XML-based model description language, which provides a powerful common data format for defining and exchanging models of neurons and neuronal networks. In the latest version of NeuroML, the structure and behavior of ion channel, synapse, cell, and network model descriptions are based on underlying definitions provided in LEMS, a domain-independent language for expressing hierarchical mathematical models of physical entities. While declarative approaches for describing models have led to greater exchange of model elements among software tools in computational neuroscience, a frequent criticism of XML-based languages is that they are difficult to work with directly. Here we describe two Application Programming Interfaces (APIs) written in Python (http://www.python.org), which simplify the process of developing and modifying models expressed in NeuroML and LEMS. The libNeuroML API provides a Python object model with a direct mapping to all NeuroML concepts defined by the NeuroML Schema, which facilitates reading and writing the XML equivalents. In addition, it offers a memory-efficient, array-based internal representation, which is useful for handling large-scale connectomics data. The libNeuroML API also includes support for performing common operations that are required when working with NeuroML documents. Access to the LEMS data model is provided by the PyLEMS API, which provides a Python implementation of the LEMS language, including the ability to simulate most models expressed in LEMS. Together, libNeuroML and PyLEMS provide a comprehensive solution for interacting with NeuroML models in a Python environment.

  16. libNeuroML and PyLEMS: using Python to combine imperative and declarative modelling approaches in computational neuroscience

    Directory of Open Access Journals (Sweden)

    Michael eVella

    2014-04-01

    Full Text Available NeuroML is an XML-based model description language, which provides a powerful common data format for defining and exchanging models of neurons and neuronal networks. In the latest version of NeuroML, the structure and behavior of ion channel, synapse, cell,and network model descriptions are based on underlying definitions provided in LEMS, a domain-independent language for expressing hierarchical mathematical models of physical entities. While declarative approaches for describing models have led to greater exchange of model elements among software tools in computational neuroscience, a frequent criticism of XML-based languages is that they are difficult to work with directly. Here we describe two APIs (Application Programming Interfaces written in Python (http://www.python.org, which simplify the process of developing and modifying models expressed in NeuroML and LEMS. The libNeuroML API provides a Python object model with a direct mapping to all NeuroML concepts defined by the NeuroML Schema, which facilitates reading and writing the XML equivalents. In addition, it offers a memory-efficient, array-based internal representation, which is useful for handling large-scale connectomics data. The libNeuroML API also includes support for performing common operations that are required when working with NeuroML documents. Access to the LEMS data model is provided by the PyLEMS API, which provides a Python implementation of the LEMS language, including the ability to simulate most models expressed in LEMS. Together, libNeuroML and PyLEMS provide a comprehensive solution for interacting with NeuroML models in a Python environment.

  17. Evaluation of Optical Depths and Self-Absorption of Strontium and Aluminum Emission Lines in Laser-Induced Breakdown Spectroscopy (LIBS).

    Science.gov (United States)

    Alfarraj, Bader A; Bhatt, Chet R; Yueh, Fang Yu; Singh, Jagdish P

    2017-04-01

    Laser-induced breakdown spectroscopy (LIBS) is a widely used laser spectroscopic technique in various fields, such as material science, forensic science, biological science, and the chemical and pharmaceutical industries. In most LIBS work, the analysis is performed using radiative transitions from atomic emissions. In this study, the plasma temperature and the product [Formula: see text] (the number density N and the absorption path length [Formula: see text]) were determined to evaluate the optical depths and the self-absorption of Sr and Al lines. A binary mixture of strontium nitrate and aluminum oxide was used as a sample, consisting of variety of different concentrations in powder form. Laser-induced breakdown spectroscopy spectra were collected by varying various parameters, such as laser energy, gate delay time, and gate width time to optimize the LIBS signals. Atomic emission from Sr and Al lines, as observed in the LIBS spectra of different sample compositions, was used to characterize the laser induced plasma and evaluate the optical depths and self-absorption of LIBS.

  18. A matrix effect and accuracy evaluation for the determination of elements in milk powder LIBS and laser ablation/ICP-OES spectrometry.

    Science.gov (United States)

    Gilon, N; El-Haddad, J; Stankova, A; Lei, W; Ma, Q; Motto-Ros, V; Yu, J

    2011-11-01

    Laser ablation coupled to inductively coupled plasma optical emission spectrometry (LA-ICP-OES) and laser-induced breakdown spectroscopy (LIBS) were investigated for the determination of Ca, Mg, Zn and Na in milk samples. The accuracy of both methods was evaluated by comparison of the concentration found using LA-ICP-OES and LIBS with classical wet digestion associated with ICP-OES determination. The results were not fully acceptable, with biases from less than 1% to more than 60%. Matrix effects were also investigated. The sample matrix can influence the temperature, electron number density (n (e)) and other excitation characteristics in the ICP. These ICP characteristics were studied and evaluated during ablation of eight milk samples. Differences in n (e) (from 8.9 to 13.8 × 10(14) cm(-3)) and rotational temperature (ranging from 3,400 to 4,400 K) occurred with no correlation with trueness. LIBS results obtained after classical external calibration procedure gave degraded accuracy, indicating a strong matrix effect. The LIBS measurements clearly showed that the major problem in LA-ICP was related to the ablation process and that LIBS spectroscopy is an excellent diagnostic tool for LA-ICP techniques.

  19. Depth-resolved multilayer pigment identification in paintings: combined use of laser-induced breakdown spectroscopy (LIBS) and optical coherence tomography (OCT).

    Science.gov (United States)

    Kaszewska, Ewa A; Sylwestrzak, Marcin; Marczak, Jan; Skrzeczanowski, Wojciech; Iwanicka, Magdalena; Szmit-Naud, Elżbieta; Anglos, Demetrios; Targowski, Piotr

    2013-08-01

    A detailed feasibility study on the combined use of laser-induced breakdown spectroscopy with optical coherence tomography (LIBS/OCT), aiming at a realistic depth-resolved elemental analysis of multilayer stratigraphies in paintings, is presented. Merging a high spectral resolution LIBS system with a high spatial resolution spectral OCT instrument significantly enhances the quality and accuracy of stratigraphic analysis. First, OCT mapping is employed prior to LIBS analysis in order to assist the selection of specific areas of interest on the painting surface to be examined in detail. Then, intertwined with LIBS, the OCT instrument is used as a precise profilometer for the online determination of the depth of the ablation crater formed by individual laser pulses during LIBS depth-profile analysis. This approach is novel and enables (i) the precise in-depth scaling of elemental concentration profiles, and (ii) the recognition of layer boundaries by estimating the corresponding differences in material ablation rate. Additionally, the latter is supported, within the transparency of the object, by analysis of the OCT cross-sectional views. The potential of this method is illustrated by presenting results on the detailed analysis of the structure of an historic painting on canvas performed to aid planned restoration of the artwork.

  20. Relationship Between LIBS Ablation and Pit Volume for Geologic Samples: Applications for the In Situ Absolute Geochronology

    Science.gov (United States)

    Devismes, Damien; Cohen, Barbara; Miller, J.-S.; Gillot, P.-Y.; Lefevre, J.-C.; Boukari, C.

    2014-01-01

    These first results demonstrate that LIBS spectra can be an interesting tool to estimate the ablated volume. When the ablated volume is bigger than 9.10(exp 6) cubic micrometers, this method has less than 10% of uncertainties. Far enough to be directly implemented in the KArLE experiment protocol. Nevertheless, depending on the samples and their mean grain size, the difficulty to have homogeneous spectra will increase with the ablated volume. Several K-Ar dating studies based on this approach will be implemented. After that, the results will be shown and discussed.

  1. Sausage instabilities stabilized by radial motion in Z-discharged plasma channel for beam propagation in LIB-fusion

    International Nuclear Information System (INIS)

    Murakami, Hiroyuki; Kawata, Shigeo; Niu, Keishiro.

    1983-01-01

    The stability of current-carrying plasma channels, which have been proposed for transporting intense ion beams from the diodes to the target in LIB-fusion devices, is discussed. The growth rate of the most dangerous surface mode, that is, the axisymmetric sausage instabilities, are examined for plasma channels with or without radial fluid motion. The growth rate of the channel with radial fluid motion is shown to be far smaller than that of the channel with no fluid motion. It is concluded that a stable plasma channel can be formed by radial fluid motion. (author)

  2. Heavy metal concentrations in soils as determined by laser-induced breakdown spectroscopy (LIBS), with special emphasis on chromium

    International Nuclear Information System (INIS)

    Senesi, G.S.; Dell'Aglio, M.; Gaudiuso, R.; De Giacomo, A.; Zaccone, C.; De Pascale, O.; Miano, T.M.; Capitelli, M.

    2009-01-01

    Soil is unanimously considered as one of the most important sink of heavy metals released by human activities. Heavy metal analysis of natural and polluted soils is generally conducted by the use of atomic absorption spectroscopy (AAS) or inductively coupled plasma optical emission spectroscopy (ICP-OES) on adequately obtained soil extracts. Although in recent years the emergent technique of laser-induced breakdown spectroscopy (LIBS) has been applied widely and with increasing success for the qualitative and quantitative analyses of a number of heavy metals in soil matrices with relevant simplification of the conventional methodologies, the technique still requires further confirmation before it can be applied fully successfully in soil analyses. The main objective of this work was to demonstrate that new developments in LIBS technique are able to provide reliable qualitative and quantitative analytical evaluation of several heavy metals in soils, with special focus on the element chromium (Cr), and with reference to the concentrations measured by conventional ICP spectroscopy. The preliminary qualitative LIBS analysis of five soil samples and one sewage sludge sample has allowed the detection of a number of elements including Al, Ca, Cr, Cu, Fe, Mg, Mn, Pb, Si, Ti, V and Zn. Of these, a quantitative analysis was also possible for the elements Cr, Cu, Pb, V and Zn based on the obtained linearity of the calibration curves constructed for each heavy metal, i.e., the proportionality between the intensity of the LIBS emission peaks and the concentration of each heavy metal in the sample measured by ICP. In particular, a triplet of emission lines for Cr could be used for its quantitative measurement. The consistency of experiments made on various samples was supported by the same characteristics of the laser-induced plasma (LIP), i.e., the typical linear distribution confirming the existence of local thermodynamic equilibrium (LTE) condition, and similar excitation

  3. Design of the Modelica Library VehProLib with Non-ideal Gas Models in Engines

    OpenAIRE

    Andersson, Conny

    2015-01-01

    This thesis covers the reconstruction and the redesign of the modeling library VehProLib,which is constructed in the modeling language Modelica with help of the modeling toolWolfram SystemModeler. The design choices are discussed and implemented. This thesisalso includes the implementation of a turbocharger package and an initial study of the justificationof the ideal gas law in vehicle modeling. The study is made with help of Van derWaals equation of states as a reference of non-ideal gas mo...

  4. libLocation: acceso a dispositivos de localización para gvSIG Desktop y Mobile

    OpenAIRE

    Jordán Aldasorro, Juan G.; Planells Jiménez, Manuel

    2009-01-01

    Inicialmente integrada en el piloto de gvSIG Mobile, la librería libLocation tiene como objetivo dotar a los proyectos gvSIG Desktop y gvSIG Mobile un acceso transparente a fuentes de localización. La librería se fundamenta en las especificaciones JSR-179 -API de localización para J2ME- y JSR-293 -API de localización para J2ME v2.0-, proporcionando una interfaz uniforme a diferentes fuentes de localización, mediante funciones de alto nivel. Asimismo, se extiende la funcionalida...

  5. Heavy metal concentrations in soils as determined by laser-induced breakdown spectroscopy (LIBS), with special emphasis on chromium.

    Science.gov (United States)

    Senesi, G S; Dell'Aglio, M; Gaudiuso, R; De Giacomo, A; Zaccone, C; De Pascale, O; Miano, T M; Capitelli, M

    2009-05-01

    Soil is unanimously considered as one of the most important sink of heavy metals released by human activities. Heavy metal analysis of natural and polluted soils is generally conducted by the use of atomic absorption spectroscopy (AAS) or inductively coupled plasma optical emission spectroscopy (ICP-OES) on adequately obtained soil extracts. Although in recent years the emergent technique of laser-induced breakdown spectroscopy (LIBS) has been applied widely and with increasing success for the qualitative and quantitative analyses of a number of heavy metals in soil matrices with relevant simplification of the conventional methodologies, the technique still requires further confirmation before it can be applied fully successfully in soil analyses. The main objective of this work was to demonstrate that new developments in LIBS technique are able to provide reliable qualitative and quantitative analytical evaluation of several heavy metals in soils, with special focus on the element chromium (Cr), and with reference to the concentrations measured by conventional ICP spectroscopy. The preliminary qualitative LIBS analysis of five soil samples and one sewage sludge sample has allowed the detection of a number of elements including Al, Ca, Cr, Cu, Fe, Mg, Mn, Pb, Si, Ti, V and Zn. Of these, a quantitative analysis was also possible for the elements Cr, Cu, Pb, V and Zn based on the obtained linearity of the calibration curves constructed for each heavy metal, i.e., the proportionality between the intensity of the LIBS emission peaks and the concentration of each heavy metal in the sample measured by ICP. In particular, a triplet of emission lines for Cr could be used for its quantitative measurement. The consistency of experiments made on various samples was supported by the same characteristics of the laser-induced plasma (LIP), i.e., the typical linear distribution confirming the existence of local thermodynamic equilibrium (LTE) condition, and similar excitation

  6. LIBS-LIF-Raman: a new tool for the future E-RIHS

    Science.gov (United States)

    Detalle, Vincent; Bai, Xueshi; Bourguignon, Elsa; Menu, Michel; Pallot-Frossard, Isabelle

    2017-07-01

    the creation of new mobile instrumentation, the French institutions are involved in the development of LIBS/LIF/RAMAN portable instrumentation. After a presentation of the challenge and the multiple advantages in building the European Infrastructure and of the French E-RIHS hub, the major interests of associating the three lasers based on analytical methods for a more global and precise characterization of the heritage objects taking into account their precious characters and their specific constraints. Lastly some preliminary results will be presented in order to give a first idea of the power of this analytical tool.

  7. Global diversity and phylogeny of pelagic shrimps of the former genera Sergestes and Sergia (Crustacea, Dendrobranchiata, Sergestidae), with definition of eight new genera

    DEFF Research Database (Denmark)

    Vereshchaka, Alexander L.; Olesen, Jørgen; Lunina, Anastasia A.

    2014-01-01

    , Phorcosergia, Prehensilosergia, Robustosergia, Scintillosergia, Challengerosergia, and Lucensosergia) and seven genera of the former genus Sergestes (Sergestes, Deosergestes, Eusergestes, Allosergestes, Parasergestes, Neosergestes, and a new genus Cornutosergestes). An identification key is presented for all...... genera of the family Sergestidae. The phylogeny of Sergestidae is mainly based on three categories of characters related to: (1) general decapod morphology, (2) male copulatory organs, and (3) photophores. Only simultaneous use of all three character types resulted in a resolved tree with minimal...

  8. A QUICK KEY TO THE SUBFAMILIES AND GENERA OF ANTS OF THE SAVANNAH RIVER SITE

    Energy Technology Data Exchange (ETDEWEB)

    Martin, D

    2007-09-04

    This taxonomic key was devised to support development of a Rapid Bioassessment Protocol using ants at the Savannah River Site. The emphasis is on 'rapid' and, because the available keys contained a very large number of genera not known to occur at the Savannah River Site, we found that the available keys were unwieldy. Because these keys contained many more genera than we would ever encounter and because this larger number of genera required more couplets in the key and often required examination of characters that are difficult to assess without higher magnifications (60X or higher), more time was required to process samples. In developing this set of keys I emphasized character states that are easier for nonspecialists to recognize. I recognize that the character sets used may lead to some errors but I believe that the error rate will be small and, for the purpose of rapid bioassessment, this error rate will be acceptable provided that overall sample sizes are adequate. Oliver and Beattie (1996a, 1996b) found that for rapid assessment of biodiversity the same results were found when identifications were done to morphospecies by people with minimal expertise as when the same data sets were identified by subject matter experts. Basset et al. (2004) concluded that it was not as important to correctly identify all species as it was to be sure that the study included as many functional groups as possible. If your study requires high levels of accuracy, it is highly recommended that, when you key out a specimen and have any doubts concerning the identification, you should refer to keys in Bolton (1994) or to the other keys used to develop this area specific taxonomic key.

  9. Two new genera of metalmark butterflies of North and Central America (Lepidoptera, Riodinidae

    Directory of Open Access Journals (Sweden)

    Marysol Trujano-Ortega

    2018-01-01

    Full Text Available Two new genera of Riodinidae (Insecta: Lepidoptera are described, Neoapodemia Trujano-Ortega, gen. n. (Neoapodemia nais (W. H. Edwards, 1876, comb. n., N. chisosensis Freeman, 1964, comb. n. and Plesioarida Trujano-Ortega & García-Vázquez, gen. n. (Plesioarida palmerii palmerii (W. H. Edwards, 1870, comb. n., P. palmerii arizona (Austin, [1989], comb. n., P. palmerii australis (Austin, [1989], comb. n., P. hepburni hepburni (Godman & Salvin, 1886, comb. n., P. hepburni remota (Austin, 1991, comb. n., P. murphyi (Austin, [1989], comb. n., P. hypoglauca hypoglauca (Godman & Salvin, 1878, comb. n., P. hypoglauca wellingi (Ferris, 1985, comb. n., P. walkeri (Godman & Salvin, 1886, comb. n., P. selvatica (De la Maza & De la Maza, 2017, comb. n.. Neoapodemia Trujano-Ortega, gen. n. is distributed in the southwestern USA and northeastern Mexico, while Plesioarida Trujano-Ortega & García-Vázquez, gen. n. is present from the southern USA to Central America. Species of these genera were previously classified as Apodemia C. Felder & R. Felder but molecular and morphological evidence separate them as new taxa. Morphological diagnoses and descriptions are provided for both new genera, including the main distinctive characters from labial palpi, prothoracic legs, wing venation and genitalia, as well as life history traits. A molecular phylogeny of one mitochondrial gene (COI and two nuclear genes (EF-1a and wg are also presented of most species of Apodemia, Neoapodemia Trujano-Ortega, gen. n., Plesioarida Trujano-Ortega & García-Vázquez, gen. n., and sequences of specimens from all tribes of Riodinidae. We compare the characters of Apodemia, Neoapodemia Trujano-Ortega, gen. n. and Plesioarida Trujano-Ortega & García-Vázquez, gen. n. and discuss the differences that support the description of these new taxa. This is a contribution to the taxonomy of the Riodinidae of North America of which the generic diversity is greater than previously recognized.

  10. New taxa, including three new genera show uniqueness of Neotropical Nepticulidae (Lepidoptera

    Directory of Open Access Journals (Sweden)

    Erik van Nieukerken

    2016-10-01

    Full Text Available After finding distinct clades in a molecular phylogeny for Nepticulidae that could not be placed in any known genera and discovering clear apomorphic characters that define these clades, as well as a number of Neotropical species that could be placed in known genera but were undescribed, three new genera and nine new species are here described from the Neotropics: Stigmella gallicola van Nieukerken & Nishida, sp. n. reared from galls on Hampea appendiculata (Malvaceae in Costa Rica, representing the first example of a gall making Stigmella; S. schinivora van Nieukerken, sp. n. reared from leafmines on Schinus terebinthifolia (Anacardiaceae in Argentina, Misiones; S. costaricensis van Nieukerken & Nishida, sp. n. and S. intronia van Nieukerken & Nishida, sp. n. each from a single specimen collected the same night in Costa Rica, Parque Nacional Chirripó; S. molinensis van Nieukerken & Snyers, sp. n. reared from leafmines on Salix humboldtiana, Peru, Lima, the first Neotropical species of the Stigmella salicis group sensu stricto; Ozadelpha van Nieukerken, gen. n. with type species O. conostegiae van Nieukerken & Nishida, sp. n., reared from leafmines on Conostegia oerstediana (Melastomataceae from Costa Rica; Neotrifurcula van Nieukerken, gen. n. with type species N. gielisorum van Nieukerken, sp. n. from Chile; Hesperolyra van Nieukerken, gen. n.. with type species Fomoria diskusi Puplesis & Robinson, 2000; Hesperolyra saopaulensis van Nieukerken, sp. n., reared from an unidentified Myrtaceae, Sao Paulo, Brasil; and Acalyptris janzeni van Nieukerken & Nishida, sp. n. from Costa Rica, Guanacaste. Five new combinations are made: Ozadelpha ovata (Puplesis & Robinson, 2000, comb. n. and Ozadelpha guajavae (Puplesis & Diškus, 2002, comb. n., Hesperolyra diskusi (Puplesis & Robinson, 2000, comb. n., Hesperolyra molybditis (Zeller, 1877, comb. n. and Hesperolyra repanda (Puplesis & Diškus, 2002, comb. n. Three specimens are briefly described, but

  11. New taxa, including three new genera show uniqueness of Neotropical Nepticulidae (Lepidoptera)

    Science.gov (United States)

    van Nieukerken, Erik J.; Doorenweerd, Camiel; Nishida, Kenji; Snyers, Chris

    2016-01-01

    Abstract After finding distinct clades in a molecular phylogeny for Nepticulidae that could not be placed in any known genera and discovering clear apomorphic characters that define these clades, as well as a number of Neotropical species that could be placed in known genera but were undescribed, three new genera and nine new species are here described from the Neotropics: Stigmella gallicola van Nieukerken & Nishida, sp. n. reared from galls on Hampea appendiculata (Malvaceae) in Costa Rica, representing the first example of a gall making Stigmella; Stigmella schinivora van Nieukerken, sp. n. reared from leafmines on Schinus terebinthifolia (Anacardiaceae) in Argentina, Misiones; Stigmella costaricensis van Nieukerken & Nishida, sp. n. and Stigmella intronia van Nieukerken & Nishida, sp. n. each from a single specimen collected the same night in Costa Rica, Parque Nacional Chirripó; Stigmella molinensis van Nieukerken & Snyers, sp. n. reared from leafmines on Salix humboldtiana, Peru, Lima, the first Neotropical species of the Stigmella salicis group sensu stricto; Ozadelpha van Nieukerken, gen. n. with type species Ozadelpha conostegiae van Nieukerken & Nishida, sp. n., reared from leafmines on Conostegia oerstediana (Melastomataceae) from Costa Rica; Neotrifurcula van Nieukerken, gen. n. with type species Neotrifurcula gielisorum van Nieukerken, sp. n. from Chile; Hesperolyra van Nieukerken, gen. n.. with type species Fomoria diskusi Puplesis & Robinson, 2000; Hesperolyra saopaulensis van Nieukerken, sp. n., reared from an unidentified Myrtaceae, Sao Paulo, Brasil; and Acalyptris janzeni van Nieukerken & Nishida, sp. n. from Costa Rica, Guanacaste. Five new combinations are made: Ozadelpha ovata (Puplesis & Robinson, 2000), comb. n. and Ozadelpha guajavae (Puplesis & Diškus, 2002), comb. n., Hesperolyra diskusi (Puplesis & Robinson, 2000), comb. n., Hesperolyra molybditis (Zeller, 1877), comb. n. and Hesperolyra repanda (Puplesis & Diškus, 2002), comb. n

  12. Further studies on the Pselaphodes complex of genera from China (Coleoptera, Staphylinidae, Pselaphinae).

    Science.gov (United States)

    Yin, Zi-Wei; Hlaváč, Peter; Li, Li-Zhen

    2013-01-01

    New data on the Pselaphodes complex of genera (Pselaphitae: Tyrini) from China is presented. The generic limits of Labomimus Sharp and Pselaphodes Westwood are discussed and expanded. A revised key to the genera of the Pselaphodes complex is provided. New geographic evidence suggests that previously believed wide-spread species Pselaphodes tianmuensis Yin, Li & Zhao contains a number of related species, resulting in a division of the species to nine separate taxa. Fourteen new species belonging to three genera are diagnosed, described and illustrated: Dayao emeiensis Yin & Li, sp. n. (Sichuan), Labomimus fimbriatus Yin & Hlaváč, sp. n. (Yunnan), Labomimus jizuensis Yin & Hlaváč, sp. n. (Yunnan), Labomimus simplicipalpus Yin & Hlaváč, sp. n. (Sichuan), Pselaphodes anhuianus Yin & Li, sp. n. (Anhui), Pselaphodes daii Yin & Hlaváč, sp. n. (Sichuan), Pselaphodes grebennikovi Yin & Hlaváč, sp. n. (Yunnan), Pselaphodes hainanensis Yin & Li, sp. n. (Hainan), Pselaphodes kuankuoshuiensis Yin & Li, sp. n. (Guizhou), Pselaphodes longilobus Yin & Hlaváč, sp. n. (Hunbei, Yunnan), Pselaphodes monoceros Yin & Hlaváč, sp. n. (Xizang), Pselaphodes pengi Yin & Li, sp. n. (Sichuan), Pselaphodes tiantongensis Yin & Li, sp. n. (Zhejiang) and Pselaphodes wrasei Yin & Li, sp. n. (Yunnan). Labomimus sichuanicus Hlaváč, Nomura & Zhou (Sichuan) is redescribed and illustrated based on a paratype and the material from the type locality. Two recently described species, Pselaphodes tibialis Yin & Li (Yunnan), and Pselaphodes venustus Yin & Li (Yunnan), are transferred to Labomimus (comb. n.) due to the presence of a median metaventral fovea. New locality data is provided for Pselaphodes aculeus Yin, Li & Zhao (Anhui, Fujian, Guangxi, Hainan, Yunnan), Pselaphodes maoershanus Yin & Li (Guangxi, Guizhou), Pselaphodes tianmuensis (Zhejiang, Anhui, Fujian, Jiangxi, Guangxi) and Pselaphodes pectinatus Yin, Li & Zhao (Hainan), with the aedeagus newly illustrated for the latter species.

  13. The systematic wood anatomy of the Moraceae (Uriticales). V. Genera of the tribe Moreae without urticaceous stamens

    NARCIS (Netherlands)

    Welle, ter B.J.H.; Koek-Noorman, J.; Topper, S.M.C.

    1983-01-01

    The wood anatomy of the Moreae without urticaceous stamens is described in detail. Generic descriptions of the following genera are provided: Antiaropsis, Artocarpus, Bagassa, Batocarpus, Clarisia, Parartocarpus, Poulsenia, Prainea, Sorocea, Sparattosyce, and Treculia. Wood anatomical variation

  14. The systematic wood anatomy of the Moraceae (Urticales) IV. Genera of the tribe Moreae with urticaceous stamens

    NARCIS (Netherlands)

    Welle, ter B.J.H.; Koek-Noorman, J.; Topper, S.M.C.

    1983-01-01

    The wood anatomy of the genera of the tribe Moreae with urticaceous stamens, viz. Broussonetia, Madura s.l. (including Cardiogyne, Chlorophora, and Cudrania), Malaisia, Milicia, Morus, Olmedia, Pachytrophe, Plecospermum, Sloetiopsis, Streblus s.l. (including Paratrophis, Phyllochlamys,

  15. Preliminary study on detection sediment contamination in soil affected by the Indian Ocean giant tsunami 2004 in Aceh, Indonesia using laser-induced breakdown spectroscopy (LIBS)

    Energy Technology Data Exchange (ETDEWEB)

    Idris, Nasrullah, E-mail: nasrullah.idris@unsyiah.ac.id [Department of Physics, Faculty of Mathematics and Natural Sciences, Syiah Kuala University, Jl. Syech Abdurrauf No. 3 Darussalam, 23111 Banda Aceh, Aceh (Indonesia); Ramli, Muliadi [Department of Chemistry, Faculty of Mathematics and Natural Sciences, Syiah Kuala University, Jl. Syech Abdurrauf No. 3 Darussalam, 23111 Banda Aceh, Aceh (Indonesia); Hedwig, Rinda; Lie, Zener Sukra [Department of Computer Engineering, Bina Nusantara University, 9 K. H. Syahdan, Jakarta 14810 (Indonesia); Kurniawan, Koo Hendrik [Research Center of Maju Makmur Mandiri Foundation, 40 Srengseng Raya, Kembangan, Jakarta Barat 11630, Jakarta (Indonesia)

    2016-03-11

    This work is intended to asses the capability of LIBS for the detection of the tsunami sediment contamination in soil. LIBS apparatus used in this work consist of a laser system and an optical multichannel analyzer (OMA) system. The soil sample was collected from in Banda Aceh City, Aceh, Indonesia, the most affected region by the giant Indian Ocean tsunami 2004. The laser beam was focused onto surface of the soil pellet using a focusing lens to produce luminous plasma. The experiment was conducted under air as surrounding gas at 1 atmosphere. The emission spectral lines from the plasma were detected by the OMA system. It was found that metal including heavy metals can surely be detected, thus implying the potent of LIBS technique as a fast screening tools of tsunami sediment contamination.

  16. Navázání svazku Ti:Sa laseru do interakční komory v sestavě LIBS+LIFS

    OpenAIRE

    Vémola, Tomáš

    2009-01-01

    Práce se zabývá problematikou navázání svazku Ti:Safírového laseru do interakní komory v soustavě LIBS+LIFS. Cílem je navrhnout optickou soustavu s požadovanými vlastnostmi. Součástí práce je i teoretický popis základních principů atomové spektroskopie s důrazem na metodu LIBS+LIFS. In this work, the problem of focusing Ti:Sapphire laser beam into LIBS+LIFS interaction chamber is resolved. The task is to design an optical setup with demanded properties. Short theoretical description of the...

  17. Design and development of a LIBS system on linear plasma device PSI-2 for in situ real-time diagnostics of plasma-facing materials

    Directory of Open Access Journals (Sweden)

    X. Jiang

    2017-08-01

    Full Text Available Laser induced breakdown spectroscopy (LIBS is a strong candidate for detecting and monitoring the H/D/T content on the surface of plasma facing components (PFCs due to its capability of fast direct in situ measurement in extreme environment (e.g., vacuum, magnetic field, long distance, complex geometry. To study the feasibilities and encounter the challenges of LIBS on plasma devices, a LIBS system has been set up on the linear plasma device PSI-2. A number of key parameters including laser energy, the influence of magnetic field and the persistence of laser induced plasma are studied. Real-time measurements of deuterium outgassing on tungsten samples exposed to deuterium plasma of 1025 D/m2 are performed in the first 40–130 min after plasma exposure. The experimental results are compared to the calculations in the literature.

  18. Body size, reproductive biology and abundance of the rare pseudoboini snakes genera Clelia and Boiruna (Serpentes, Colubridae) in Brazil

    OpenAIRE

    Lígia Pizzatto

    2005-01-01

    Pseudoboini snakes of the genera Clelia and Boiruna are apparently rare in nature and certainly rare in collections. This work presents data on body size, reproduction and abundance of five Brazilian species of these genera, in the largest collection of snakes in Latin America, the Instituto Butantan. Despite scarcity of data, follicular cycle seems to be continuous in most species, except Clelia rustica, which occurs in highlands. Females are largerthan males in all species, and fecundity is...

  19. Pre-Clinical Testing of Real-Time PCR Assays for Diarrheal Disease Agents of Genera Escherichia and Shigella

    Science.gov (United States)

    2014-05-16

    FOR DIARRHEAL DISEASE AGENTS OF GENERA ESCHERICHIA AND SHIGELLA May 16, 2014 Reporting Period: October 1, 2010 to September 30, 2013...10-2010 - 30-09-2013 PRE-CLINICAL TESTING OF REAL-TIME PCR ASSAYS FOR DIARRHEAL DISEASE AGENTS OF GENERA ESCHERICHIA AND SHIGELLA ...Texas (MOA 2007 - 2013. Agreement No.: DODI 4000.19; AFI 25-201). Pre-clinical test results qualify ETEC and Shigella real-time PCR assays as lead

  20. Qualitative and quantitative analysis of human nails to find correlation between nutrients and vitamin D deficiency using LIBS and ICP-AES.

    Science.gov (United States)

    Almessiere, M A; Altuwiriqi, R; Gondal, M A; AlDakheel, R K; Alotaibi, H F

    2018-08-01

    In this work, we analysed human fingernails of people who suffer from vitamin D deficiency using the laser-induced breakdown spectroscopy(LIBS) and inductively coupled plasma atomic emission spectroscopy (ICP-AES)techniques. The measurements have been conducted on 71 nail samples collected randomly from volunteers of different genders and ages ranged between 20 and 50 years. The main aim of this study is to find the correlation between vitamin D deficiency and the intensity of some dominated lines in the LIBS spectra. A LIBS spectrum consists of dominant lines of fifteen elements including calcium, magnesium, sodium, potassium, titanium, iron, chloride, sulphur, copper, chromium, zinc, nitrogen, phosphor, and oxygen. By recording the spectrum in specific ranges and focusing on calcium, magnesium, sodium, and potassium, we found a correlation between the intensity of the potassium (K) lines at (766.5 and 769.9 nm)and vitamin D level in both age groups (20 and 25 years old), with weak correlation for the calcium (Ca), magnesium (Mg), and sodium (Na) lines. To verify the validity of the LIBS results, we analysed the nail samples with ICP, a standard analytical technique. The elements detected with our LIBS technique are in a good agreement with those identified by ICP-AES. From the health and physiological perspectives, the LIBS system, which is used for spectral analysis in this work, is appropriate for diagnostic purposes such as to find the correlation between vitamin D deficiency and potassium content, especially for hypertensive patients who simultaneously take potassium-based medication and vitamin D supplement. Copyright © 2018 Elsevier B.V. All rights reserved.

  1. Detection of calculus by laser-induced breakdown spectroscopy (LIBS) using an ultra-short pulse laser system (USPL)

    Science.gov (United States)

    Schelle, F.; Brede, O.; Krueger, S.; Oehme, B.; Dehn, C.; Frentzen, M.; Braun, A.

    2011-03-01

    The aim of this study was to assess the detection of calculus by Laser Induced Breakdown Spectroscopy (LIBS). The study was performed with an Nd:YVO4 laser, emitting pulses with a duration of 8 ps at a wavelength of 1064 nm. A repetition rate of 500 kHz at an average power of 5 W was used. Employing a focusing lense, intensities of the order of 1011 W/cm2 were reached on the tooth surface. These high intensities led to the generation of a plasma. The light emitted by the plasma was collimated into a fibre and then analyzed by an echelle spectroscope in the wavelength region from 220 nm - 900 nm. A total number of 15 freshly extracted teeth was used for this study. For each tooth the spectra of calculus and cementum were assessed separately. Comprising all single measurements median values were calculated for the whole spectrum, leading to two specific spectra, one for calculus and one for cementum. For further statistical analysis 28 areas of interest were defined as wavelength regions, in which the signal strength differed regarding the material. In 7 areas the intensity of the calculus spectrum differed statistically significant from the intensity of the cementum spectrum (p calculus. Further studies are necessary to verify that LIBS is a minimally invasive method allowing a safe application in laser-guided dentistry.

  2. Laser-Induced Breakdown Spectroscopy (LIBS) for the Measurement of Spatial Structures and Fuel Distribution in Flames.

    Science.gov (United States)

    Kotzagianni, Maria; Kakkava, Eirini; Couris, Stelios

    2016-04-01

    Laser-induced breakdown spectroscopy (LIBS) is used for the mapping of local structures (i.e., reactants and products zones) and for the determination of fuel distribution by means of the local equivalence ratio ϕ in laminar, premixed air-hydrocarbon flames. The determination of laser threshold energy to induce breakdown in the different zones of flames is employed for the identification and demarcation of the local structures of a premixed laminar flame, while complementary results about fuel concentration were obtained from measurements of the cyanogen (CN) band Β(2)Σ(+)--Χ(2)Σ(+), (Δυ = 0) at 388.3 nm and the ratio of the atomic lines of hydrogen (Hα) and oxygen (O(I)), Hα/O. The combination of these LIBS-based methods provides a relatively simple to use, rapid, and accurate tool for online and in situ combustion diagnostics, providing valuable information about the fuel distribution and the spatial variations of the local structures of a flame. © The Author(s) 2016.

  3. Detection and quantification of a toxic salt substitute (LiCl) by using laser induced breakdown spectroscopy (LIBS).

    Science.gov (United States)

    Sezer, Banu; Velioglu, Hasan Murat; Bilge, Gonca; Berkkan, Aysel; Ozdinc, Nese; Tamer, Ugur; Boyaci, Ismail Hakkı

    2018-01-01

    The use of Li salts in foods has been prohibited due to their negative effects on central nervous system; however, they might still be used especially in meat products as Na substitutes. Lithium can be toxic and even lethal at higher concentrations and it is not approved in foods. The present study focuses on Li analysis in meatballs by using laser induced breakdown spectroscopy (LIBS). Meatball samples were analyzed using LIBS and flame atomic absorption spectroscopy. Calibration curves were obtained by utilizing Li emission lines at 610nm and 670nm for univariate calibration. The results showed that Li calibration curve at 670nm provided successful determination of Li with 0.965 of R 2 and 4.64ppm of limit of detection (LOD) value. While Li Calibration curve obtained using emission line at 610nm generated R 2 of 0.991 and LOD of 22.6ppm, calibration curve obtained at 670nm below 1300ppm generated R 2 of 0.965 and LOD of 4.64ppm. Copyright © 2017. Published by Elsevier Ltd.

  4. Quantitative Analysis of Heavy Metals in Water Based on LIBS with an Automatic Device for Sample Preparation

    International Nuclear Information System (INIS)

    Hu Li; Zhao Nanjing; Liu Wenqing; Meng Deshuo; Fang Li; Wang Yin; Yu Yang; Ma Mingjun

    2015-01-01

    Heavy metals in water can be deposited on graphite flakes, which can be used as an enrichment method for laser-induced breakdown spectroscopy (LIBS) and is studied in this paper. The graphite samples were prepared with an automatic device, which was composed of a loading and unloading module, a quantitatively adding solution module, a rapid heating and drying module and a precise rotating module. The experimental results showed that the sample preparation methods had no significant effect on sample distribution and the LIBS signal accumulated in 20 pulses was stable and repeatable. With an increasing amount of the sample solution on the graphite flake, the peak intensity at Cu I 324.75 nm accorded with the exponential function with a correlation coefficient of 0.9963 and the background intensity remained unchanged. The limit of detection (LOD) was calculated through linear fitting of the peak intensity versus the concentration. The LOD decreased rapidly with an increasing amount of sample solution until the amount exceeded 20 mL and the correlation coefficient of exponential function fitting was 0.991. The LOD of Pb, Ni, Cd, Cr and Zn after evaporating different amounts of sample solution on the graphite flakes was measured and the variation tendency of their LOD with sample solution amounts was similar to the tendency for Cu. The experimental data and conclusions could provide a reference for automatic sample preparation and heavy metal in situ detection. (paper)

  5. Laser-induced breakdown spectroscopy (LIBS) technique for the determination of the chemical composition of complex inorganic materials

    Science.gov (United States)

    Łazarek, Łukasz; Antończak, Arkadiusz J.; Wójcik, Michał R.; Kozioł, Paweł E.; Stepak, Bogusz; Abramski, Krzysztof M.

    2014-08-01

    Laser-induced breakdown spectroscopy (LIBS) is a fast, fully optical method, that needs little or no sample preparation. In this technique qualitative and quantitative analysis is based on comparison. The determination of composition is generally based on the construction of a calibration curve namely the LIBS signal versus the concentration of the analyte. Typically, to calibrate the system, certified reference materials with known elemental composition are used. Nevertheless, such samples due to differences in the overall composition with respect to the used complex inorganic materials can influence significantly on the accuracy. There are also some intermediate factors which can cause imprecision in measurements, such as optical absorption, surface structure, thermal conductivity etc. This paper presents the calibration procedure performed with especially prepared pellets from the tested materials, which composition was previously defined. We also proposed methods of post-processing which allowed for mitigation of the matrix effects and for a reliable and accurate analysis. This technique was implemented for determination of trace elements in industrial copper concentrates standardized by conventional atomic absorption spectroscopy with a flame atomizer. A series of copper flotation concentrate samples was analyzed for contents of three elements, that is silver, cobalt and vanadium. It has been shown that the described technique can be used to qualitative and quantitative analyses of complex inorganic materials, such as copper flotation concentrates.

  6. Emended description of the family Beijerinckiaceae and transfer of the genera Chelatococcus and Camelimonas to the family Chelatococcaceae fam. nov.

    Science.gov (United States)

    Dedysh, Svetlana N; Haupt, Evan S; Dunfield, Peter F

    2016-08-01

    The family Beijerinckiaceae was circumscribed in 2005 to accommodate four genera of phylogenetically related alphaproteobacteria: Beijerinckia, Chelatococcus, Methylocella and Methylocapsa. Later, four additional genera, i.e. Methylovirgula, Methyloferula, Methylorosula and Camelimonas, were described and assigned to this family, which now accommodates 21 species with validly published names. Members of this family possess strikingly different lifestyles, including chemoheterotrophy, facultative methylotrophy, obligate methanotrophy and facultative methanotrophy. Levels of 16S rRNA gene sequence similarity among most of these bacteria range from 96 to 98 %, suggesting a common evolutionary origin. The genera Chelatococcus and Camelimonas, however, are not monophyletic with the other described genera based on 16S rRNA gene sequence phylogeny, and instead form a distant cluster more closely related to the Methylobacteriaceae. Physiologically these two genera also lack several properties common to the other Beijerinckiaceae. On the other hand, the genus Rhodoblastus, presently considered a member of the Bradyrhizobiaceae, affiliates with high confidence to the Beijerinckiaceae. Here, we propose to transfer the genera Chelatococcus and Camelimonas to the family Chelatococcaceae fam. nov., and present an emended description of the family Beijerinckiaceae, including the genus Rhodoblastus.

  7. Massive production of butanediol during plant infection by phytopathogenic bacteria of the genera Dickeya and Pectobacterium.

    Science.gov (United States)

    Effantin, Géraldine; Rivasseau, Corinne; Gromova, Marina; Bligny, Richard; Hugouvieux-Cotte-Pattat, Nicole

    2011-11-01

    Plant pathogenic bacteria of the genera Dickeya and Pectobacterium are broad-host-range necrotrophs which cause soft-rot diseases in important crops. A metabolomic analysis, based on (13)C-NMR spectroscopy, was used to characterize the plant-bacteria interaction. Metabolic profiles revealed a decline in plant sugars and amino acids during infection and the concomitant appearance of a compound identified as 2,3-butanediol. Butanediol is the major metabolite found in macerated tissues of various host plants. It is accumulated during the symptomatic phase of the disease. Different species of Dickeya or Pectobacterium secrete high levels of butanediol during plant infection. Butanediol has been described as a signalling molecule involved in plant/bacterium interactions and, notably, able to induce plant systemic resistance. The bud genes, involved in butanediol production, are conserved in the phytopathogenic enterobacteria of the genera Dickeya, Pectobacterium, Erwinia, Pantoea and Brenneria. Inactivation of the bud genes of Dickeya dadantii revealed that the virulence of budA, budB and budR mutants was clearly reduced. The genes budA, budB and budC are highly expressed during plant infection. These data highlight the importance of butanediol metabolism in limiting acidification of the plant tissue during the development of the soft-rot disease caused by pectinolytic enterobacteria. © 2011 Blackwell Publishing Ltd.

  8. A three-parameter model for classifying anurans into four genera based on advertisement calls.

    Science.gov (United States)

    Gingras, Bruno; Fitch, William Tecumseh

    2013-01-01

    The vocalizations of anurans are innate in structure and may therefore contain indicators of phylogenetic history. Thus, advertisement calls of species which are more closely related phylogenetically are predicted to be more similar than those of distant species. This hypothesis was evaluated by comparing several widely used machine-learning algorithms. Recordings of advertisement calls from 142 species belonging to four genera were analyzed. A logistic regression model, using mean values for dominant frequency, coefficient of variation of root-mean square energy, and spectral flux, correctly classified advertisement calls with regard to genus with an accuracy above 70%. Similar accuracy rates were obtained using these parameters with a support vector machine model, a K-nearest neighbor algorithm, and a multivariate Gaussian distribution classifier, whereas a Gaussian mixture model performed slightly worse. In contrast, models based on mel-frequency cepstral coefficients did not fare as well. Comparable accuracy levels were obtained on out-of-sample recordings from 52 of the 142 original species. The results suggest that a combination of low-level acoustic attributes is sufficient to discriminate efficiently between the vocalizations of these four genera, thus supporting the initial premise and validating the use of high-throughput algorithms on animal vocalizations to evaluate phylogenetic hypotheses.

  9. Human exposure to airborne fungi from genera used as biocontrol agents in plant production.

    Science.gov (United States)

    Madsen, Anne Mette; Hansen, Vinni Mona; Meyling, Nicolai Vitt; Eilenberg, Jørgen

    2007-01-01

    The fungi Trichoderma harzianum, T. polysporum, T. viride, Paeciliomyces fumosoroseus, P. lilacinus, Verticillium/lecanicillium lecanii, Ulocladium oudemansii, U. atrum and Beauveria bassiana are used or considered to be used for biocontrol of pests and plant diseases. Human exposure to these fungi in environments where they may naturally occur or are used as biocontrol agents has not been directly investigated to date. This review aims to provide an overview of the current knowledge of human exposure to fungi from the relevant genera. The subject of fungal taxonomy due to the rapid development of this issue is also discussed. B. bassiana, V. lecanii, T. harzianum, T. polysporum, P. lilacinus and U. oudemansii were infrequently present in the air and thus people in general seem to be seldom exposed to these fungi. However, when V. lecanii was present, high concentrations were measured. Fungi from the genera Trichoderma, Paecilomyces and Ulocladium were rarely identified to the species level and sometimes high concentrations were reported. T. viride and U. atrum were detected frequently in different environments and sometimes with a high frequency of presence in samples. Thus, people seem to be frequently exposed to these fungi. Sequence data have led to recent revisions of fungal taxonomy, and in future studies it is important to specify the taxonomy used for identification, thus making comparisons possible.

  10. 18S rDNA phylogeny of lamproderma and allied genera (Stemonitales, Myxomycetes, Amoebozoa.

    Directory of Open Access Journals (Sweden)

    Anna Maria Fiore-Donno

    Full Text Available The phylogenetic position of the slime-mould genus Lamproderma (Myxomycetes, Amoebozoa challenges traditional taxonomy: although it displays the typical characters of the order Stemonitales, it appears to be sister to Physarales. This study provides a small subunit (18S or SSU ribosomal RNA gene-based phylogeny of Lamproderma and its allies, with new sequences from 49 specimens in 12 genera. We found that the order Stemonitales and Lamproderma were both ancestral to Physarales and that Lamproderma constitutes several clades intermingled with species of Diacheopsis, Colloderma and Elaeomyxa. We suggest that these genera may have evolved from Lamproderma by multiple losses of fruiting body stalks and that many taxonomic revisions are needed. We found such high genetic diversity within three Lamproderma species that they probably consist of clusters of sibling species. We discuss the contrasts between genetic and morphological divergence and implications for the morphospecies concept, highlighting the phylogenetically most reliable morphological characters and pointing to others that have been overestimated. In addition, we showed that the first part (~600 bases of the SSU rDNA gene is a valuable tool for phylogeny in Myxomycetes, since it displayed sufficient variability to distinguish closely related taxa and never failed to cluster together specimens considered of the same species.

  11. Lead (Pb) bioaccumulation; genera Bacillus isolate S1 and SS19 as a case study

    Science.gov (United States)

    Arifiyanto, Achmad; Apriyanti, Fitria Dwi; Purwaningsih, Puput; Kalqutny, Septian Hary; Agustina, Dyah; Surtiningsih, Tini; Shovitri, Maya; Zulaika, Enny

    2017-06-01

    Lead (Pb) includes a group of large heavy metal in nature was toxic either on animal or human and did not provide an advantage function biologically. Bacillus isolates S1 and SS19 known resistant to lead up to 50 mg / L PbCl2. In this research will be examined whether genera Bacillus isolates S1 and SS19 could accumulate metal lead (Pb), their capability in accumulating and profile protein differences when the bacteria genera Bacillus isolates S1 and SS19 get exposed metal lead (Pb). Inoculum at age ± 9 hours are used, with a Nutrient Broth (NB) containing 50, 75 and 100 mg / L PbCl2. Inductively Coupled Plasma Atomic Emission Spectrometry (ICP) used to assessed Pb2+ concentrations. Bioaccumulation levels of Pb2+ by Bacillus isolate S1 and SS19 related to the distinction of beginning concentration to the final concentration. Bacillus isolate S1 achieved 53% and 51% bioaccumulation efficiency rate in lead presence concentration (75 and 100 mg/L) and 51% (50 mg/L). Another way Bacillus isolate SS19 was able to accumulate 57% (50 mg/L PbCl2) and kept stable on 36% bioaccumulation efficiency rate (75 and 100 mg/L PbCl2). Regarding SDS-PAGE electrophoresis protein profile result, protein in ± 127 kDa, molecule mass detected in the presence of Lead for Bacillus isolate S1.

  12. Comprehensive secondary structure elucidation of four genera of the family Pospiviroidae.

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    Tamara Giguère

    Full Text Available Viroids are small, circular, single stranded RNA molecules that infect plants. Since they are non-coding, their structures play a critical role in their life cycles. To date, little effort has been spend on elucidating viroid structures in solution due to both the experimental difficulties and the time-consuming nature of the methodologies implicated. Recently, the technique of high-throughput selective 2'-hydroxyl acylation analyzed by primer extension (SHAPE was adapted for the probing of the members of family Avsunviroidae, all of whom replicate in the chloroplast and demonstrate ribozyme activity. In the present work, twelve viroid species belonging to four different genera of the family Pospiviroidae, whose members are characterized by the presence of a central conserved region (CCR and who replicate in nucleus of the host, were probed. Given that the structures of five distinct viroid species from the family Pospiviroidae have been previously reported, an overview of the different structural characteristics for all genera and the beginning of a manual classification of the different viroids based on their structural features are presented here.

  13. Phylogenetic relationships among Lactuca (Asteraceae) species and related genera based on ITS-1 DNA sequences.

    Science.gov (United States)

    Koopman, W J; Guetta, E; van de Wiel, C C; Vosman, B; van den Berg, R G

    1998-11-01

    Internal transcribed spacer (ITS-1) sequences from 97 accessions representing 23 species of Lactuca and related genera were determined and used to evaluate species relationships of Lactuca sensu lato (s.l.). The ITS-1 phylogenies, calculated using PAUP and PHYLIP, correspond better to the classification of Feráková than to other classifications evaluated, although the inclusion of sect. Lactuca subsect. Cyanicae is not supported. Therefore, exclusion of subsect. Cyanicae from Lactuca sensu Feráková is proposed. The amended genus contains the entire gene pool (sensu Harlan and De Wet) of cultivated lettuce (Lactuca sativa). The position of the species in the amended classification corresponds to their position in the lettuce gene pool. In the ITS-1 phylogenies, a clade with L. sativa, L. serriola, L. dregeana, L. altaica, and L. aculeata represents the primary gene pool. L. virosa and L. saligna, branching off closest to this clade, encompass the secondary gene pool. L. virosa is possibly of hybrid origin. The primary and secondary gene pool species are classified in sect. Lactuca subsect. Lactuca. The species L. quercina, L. viminea, L. sibirica, and L. tatarica, branching off next, represent the tertiary gene pool. They are classified in Lactuca sect. Lactucopsis, sect. Phaenixopus, and sect. Mulgedium, respectively. L. perennis and L. tenerrima, classified in sect. Lactuca subsect. Cyanicae, form clades with species from related genera and are not part of the lettuce gene pool.

  14. Patterns of diversification in islands: A comparative study across three gecko genera in the Socotra Archipelago.

    Science.gov (United States)

    Garcia-Porta, Joan; Morales, Hernán E; Gómez-Díaz, Elena; Sindaco, Roberto; Carranza, Salvador

    2016-05-01

    In this study we used the complete fauna of geckos of the Socotra Archipelago to test whether the three gecko genera co-occurring in the islands (Pristurus, Hemidactylus and Haemodracon) produced similar outcomes of morphological and climatic diversification. To test this, we produced a time-calibrated tree of 346 geckos including all 16 endemic species of the archipelago and 26 potential close-relatives in the continent. Our dating estimates revealed that most of the diversity of geckos in the archipelago was the consequence of in situ diversification. However not all genera shared similar patterns of diversification. While in Hemidactylus and Haemodracon this involved great differences in body size and low levels of climatic diversification (mostly involving sympatric distributions), an opposite pattern appeared in Pristurus in which most of the diversification involved shifts in climatic envelopes (mostly involving allopatric and parapatric distributions) but almost no size differentiation. Consistently with this, Pristurus was the only genus in which rates of size diversification in islands were substantially lower than in the continent. This illustrates how different groups can greatly differ in their patterns of intra-island diversification and highlights the importance of taxon-dependent factors at determining different patterns of diversification in the same insular context. Copyright © 2016 Elsevier Inc. All rights reserved.

  15. Distributional patterns and possible origins of the tribes and genera of Coelidiinae (Homoptera, Membracoidea, Cicadellidae

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    Mervin W Nielson

    2000-12-01

    Full Text Available Leafhoppers are well known biological indicators of zoogeographical regions owing, in part, to their phytodependency, high host plant specificity and relatively low vagility. In this connection, we discuss distributional patterns and possible zoogeographical origins of nine constituent tribes and their genera of the pantropical subfamily Coelidiinae. Among 118 known genera, only eight currently occupy more than one zoogeographical region, indicating an extremely high endemic profile which supports the proposed centers of origin and relatively low rate of intercontinental dispersal. The pantropical tribe Coelidiini is suggested as the basal group of the subfamily which is believed to have arisen prior to continental drift (late Jurassic-early Cretaceous because there appears to be no other evidence at the present time to explain its near cosmopolitan distribution. Possible origins of three Old World tribes, Hikangiini (Ethiopian, Thagriini (Oriental and Thanini (Australian and four New World -(Neotropical tribes, Teruliini, Tinobregmini, Gabritini and Sandersellini are elucidated. The tribe Youngolidiini occupies the Neotropical and Ethiopian realms but its origin is problematical. There appears to be ample evidence that origin/dispersal patterns are related to the geological history of the areas occupied by its faunal members.

  16. Description of new genera and species of marine cyanobacteria from the Portuguese Atlantic coast.

    Science.gov (United States)

    Brito, Ângela; Ramos, Vitor; Mota, Rita; Lima, Steeve; Santos, Arlete; Vieira, Jorge; Vieira, Cristina P; Kaštovský, Jan; Vasconcelos, Vitor M; Tamagnini, Paula

    2017-06-01

    Aiming at increasing the knowledge on marine cyanobacteria from temperate regions, we previously isolated and characterized 60 strains from the Portuguese foreshore and evaluate their potential to produce secondary metabolites. About 15% of the obtained 16S rRNA gene sequences showed less than 97% similarity to sequences in the databases revealing novel biodiversity. Herein, seven of these strains were extensively characterized and their classification was re-evaluated. The present study led to the proposal of five new taxa, three genera (Geminobacterium, Lusitaniella, and Calenema) and two species (Hyella patelloides and Jaaginema litorale). Geminobacterium atlanticum LEGE 07459 is a chroococcalean that shares morphological characteristics with other unicellular cyanobacterial genera but has a distinct phylogenetic position and particular ultrastructural features. The description of the Pleurocapsales Hyella patelloides LEGE 07179 includes novel molecular data for members of this genus. The filamentous isolates of Lusitaniella coriacea - LEGE 07167, 07157 and 06111 - constitute a very distinct lineage, and seem to be ubiquitous on the Portuguese coast. Jaaginema litorale LEGE 07176 has distinct characteristics compared to their marine counterparts, and our analysis indicates that this genus is polyphyletic. The Synechococcales Calenema singularis possess wider trichomes than Leptolyngbya, and its phylogenetic position reinforces the establishment of this new genus. Copyright © 2017 Elsevier Inc. All rights reserved.

  17. Chromosome numbers and karyotype evolution in holoparasitic Orobanche (Orobanchaceae) and related genera

    Science.gov (United States)

    Schneeweiss, G.M.; Palomeque, T.; Colwell, A.E.; Weiss-Schneeweiss, H.

    2004-01-01

    Chromosome numbers and karyotypes of species of Orobanche, Cistanche, and Diphelypaea (Orobanchaceae) were investigated, and 108 chromosome counts of 53 taxa, 19 counted for the first time, are presented with a thorough compilation of previously published data. Additionally, karyotypes of representatives of these genera, including Orobanche sects. Orobanche and Trionychon, are reported. Cistanche (x = 20) has large meta- to submetacentric chromosomes, while those of Diphelypaea (x = 19) are medium-sized submeta-to acrocentrics. Within three analyzed sections of Orobanche, sects. Myzorrhiza (x = 24) and Trionychon (x = 12) possess medium-sized submeta- to acrocentrics, while sect. Orobanche (x = 19) has small, mostly meta- to submetacentric, chromosomes. Polyploidy is unevenly distributed in Orobanche and restricted to a few lineages, e.g., O. sect. Myzorrhiza or Orobanche gracilis and its relatives (sect. Orobanche). The distribution of basic chromosome numbers supports the groups found by molecular phylogenetic analyses: Cistanche has x = 20, the Orobanche-group (Orobanche sect. Orobanche, Diphelypaea) has x = 19, and the Phelipanche-group (Orobanche sects. Gymnocaulis, Myzorrhiza, Trionychon) has x = 12, 24. A model of chromosome number evolution in Orobanche and related genera is presented: from two ancestral base numbers, xh = 5 and xh = 6, independent polyploidizations led to x = 20 (Cistanche) and (after dysploidization) x = 19 (Orobanche-group) and to x = 12 and x = 24 (Phelipanche-group), respectively.

  18. Taxonomic notes on the afrotropical genera Hapalogenius Hagedorn, Hylesinopsis Eggers, and Rhopalopselion Hagedorn (Coleoptera, Curculionidae, Scolytinae

    Directory of Open Access Journals (Sweden)

    Roger Beaver

    2010-09-01

    Full Text Available Taxonomic confusion among the afrotropical scolytine genera Hapalogenius Hagedorn, Hylesinopsis Eggers and Rhopalopselion Hagedorn, and their synonyms is discussed with especial reference to the catalogues of Wood and Bright (1992, and Alonso-Zarazaga and Lyal (2009. A key is given to separate the three genera recognised, and the species considered to be included in each genus are listed. Hylesinopsis is resurrected from synonymy with Hapalogenius, and shown not to be closely related to it. Chilodendron Schedl is considered to be a synonym of Hylesinopsis and not of Xylechinus Chapuis. The following new synonymy is proposed at specific level: Hapalogenius africanus (Eggers (= Hapalogenius lesnei Eggers, = Metahylesinus brincki Schedl; Hapalogenius fuscipennis (Chapuis (= Hapalogenius bimaculatus Eggers; Hapalogenius oblongus (Eggers (= Metahylesinus striatus Schedl; Hylesinopsis fasciata (Hagedorn (= Kissophagus punctatus Eggers; Phrixosoma niger Eggers (= Hapalogenius niger Schedl. The following species are returned to Hylesinopsis from Hapalogenius to which they were transferred by Alonso-Zarazaga and Lyal (2009: Hylesinopsis alluaudi (Lepesme, H. angolensis (Schedl, H. arabiae (Schedl, H. atra (Nunberg, H. confusa (Eggers, H. decellei (Nunberg, H. dubia Eggers, H. emarginata (Nunberg, H. fasciata (Hagedorn, H. ficus (Schedl, H. granulata (Lepesme, H. hirsuta (Schedl, H. joveri (Schedl, H. pauliani (Lepesme, H. punctata (Eggers, H. saudiarabiae (Schedl. The following new combination is given: Hylesinopsis leprosula (Browne from Cryphalus Erichson. New distributional records are given for some species.

  19. Molecular phylogeny of the lionfish genera Dendrochirus and Pterois (Scorpaenidae, Pteroinae) based on mitochondrial DNA sequences.

    Science.gov (United States)

    Kochzius, Marc; Söller, Rainer; Khalaf, Maroof A; Blohm, Dietmar

    2003-09-01

    This study investigates the molecular phylogeny of seven lionfishes of the genera Dendrochirus and Pterois. MP, ML, and NJ phylogenetic analysis based on 964 bp of partial mitochondrial DNA sequences (cytochrome b and 16S rDNA) revealed two main clades: (1) "Pterois" clade (Pterois miles and Pterois volitans), and (2) "Pteropterus-Dendrochirus" clade (remainder of the sampled species). The position of Dendrochirus brachypterus either basal to the main clades or in the "Pteropterus-Dendrochirus" clade cannot be resolved. However, the molecular phylogeny did not support the current separation of the genera Pterois and Dendrochirus. The siblings P. miles and P. volitans are clearly separated and our results support the proposed allopatric or parapatric distribution in the Indian and Pacific Ocean. However, the present analysis cannot reveal if P. miles and P. volitans are separate species or two populations of a single species, because the observed separation in different clades can be either explained by speciation or lineage sorting. Molecular clock estimates for the siblings P. miles and P. volitans suggest a divergence time of 2.4-8.3 mya, which coincide with geological events that created vicariance between populations of the Indian and Pacific Ocean.

  20. NextLib : un sistema de software basado en ontologías para la consulta automática de OPACs desde sedes web especializadas

    OpenAIRE

    Felip Vidal, Lledó; Orduña-Malea, Enrique

    2008-01-01

    Las extensiones para navegadores web (Add-ons) están ampliando las funcionalidades de éstos. Entre ellas cabe destacar la reciente aparición de LibX, herramienta que permite la interacción entre el OPAC de una biblioteca y la Web. Se estudian las limitaciones de esta herramienta en cuanto a detección automática de datos y automatización de tareas para proponer un sistema (NextLib) que, mediante la combinación de diferentes aplicaciones, permita superarlas. Este sistema estaría for...

  1. 1945, Le jazz libère l’Allemagne... pour la seconde fois

    Directory of Open Access Journals (Sweden)

    Pascale Cohen-Avenel

    2010-11-01

    Full Text Available 1945, l’Allemagne vaincue est détruite, le régime en déroute, les morts innombrables, un grand nombre d’hommes faits prisonniers. La démocratie n’existe pas. Tout est à (reconstruire. Arrivent alors les troupes alliées et, avec les Américains, le jazz, une musique si prenante que bon nombre de jeunes d’Europe se laissent séduire immédiatement. Comme d’autres européens, les Allemands sont saisis par cette musique qui leur permet de se libérer, de s’exprimer et de le faire à l’unisson des autres États, vaincus ou vainqueurs. C’est au son de cette musique américaine, et plus tard du rock ‘n’ roll, qu’ils vont apprendre ou réapprendre la démocratie occidentale. Mais le triomphe de cette musique est-il seulement émancipateur ? N’est-il pas aussi le signe d’une domination du monde, nouvelle et sans partage, par le géant américain et sa puissance économique dont le plan Marshall incarne à la fois les bienfaits et la toute-puissance ? En fait, cette question est loin d’être inédite en Allemagne. Elle s’est déjà posée avec la même acuité en 1920, date à laquelle les Allemands furent confrontés pour la première fois au jazz dans des circonstances assez proches : une défaite humiliante, l’effondrement du régime, une démocratie imposée par les vainqueurs, la quête d’une culture et de valeurs démocratiques sans racines dans l’inconscient collectif, une possible émancipation des corps grâce à la danse après des années d’oppression et de militarisme. Car c’est dès 1920 que les Allemands découvrent le jazz, une musique alors non seulement américaine, mais noire, une musique qui semble primitive, mais qui incarne aussi les grandes villes les plus modernes du monde et une domination économique que les Allemands craignent depuis la fin du XXe siècle. D’économique, le « péril américain », se fait culturel par le biais de la danse. A moins qu’il n’offre enfin aux

  2. Contestation internationale contre élites mondiales : l’action directe et la politique délibérative sont-elles conciliables ?

    Directory of Open Access Journals (Sweden)

    Francis Dupuis-Déri

    2012-04-01

    Full Text Available Dans cet article, j’analyse à la lumière des normes libérales de la politique délibérative le bien-fondé de l’action directe contre les institutions internationales associées au néolibéralisme et à la mondialisation du capitalisme (Banque mondiale, Organisation mondiale du commerce, etc.. Le processus délibératif de ces organismes étant illégitime du point de vue de la théorie de la politique délibérative, les activistes du mouvement altermondialiste sont en droit de contester ces organismes. De plus, une attitude de contestation peut avoir en elle-même une valeur délibérative pour au moins sept raisons : (1 lancer une délibération ; (2 élargir la participation à la délibération ; (3 renforcer la représentativité ; (4 faire circuler l’information et faire connaître les arguments (publicité ; (5 stimuler l’imagination ; (6 pousser à l’action ; (7 relancer la délibération. Finalement, les mouvements sociaux tels que le mouvement altermondialiste peuvent être vus comme des forums délibératifs. Ainsi, qui veut évaluer la légitimité de l’action directe doit prendre en considération la nature délibérative du processus par lequel les activistes choisissent les moyens les plus efficaces à utiliser pour corriger les défauts du processus délibératif officiel et pour faire avancer l’égalité, la liberté et la justice.In this article I examine the legitimacy of direct action in relation to liberal deliberative norms and global institutions (World Bank, World Trade Organization, etc.. Since the deliberative processes of these institutions are illegitimate according to the theory of deliberative politics, the activists of the movement for global justice should be legitimate to confront these institutions. Moreover, confrontational action in itself may have a deliberative value for at least seven reasons: (1 initiating deliberation (agenda-setting ; (2 enlarging participation ; (3 enlarging

  3. STUDI PERBANDINGAN ANALISIS UNSUR PLUMBUM (PB DARI HASIL ELEKTROLISIS ANTARA METODE LASER- INDUCED BREAKDOWN SPECTROSCOPY (LIBS DENGAN METODE KONVENSIONAL

    Directory of Open Access Journals (Sweden)

    H. S. Suyanto

    2014-07-01

    Full Text Available Penelitian ini bertujuan menganalisis unsur Pb hasil proses elektrolisis dengan metode alternatif laser-induced breakdown spectroscopy (LIBS dan metode konvensional. Elektrolisis menggunakan tembaga (Cu sebagai katoda dan karbon sebagai anoda. Unsur Pb yang terdeposisi pada katoda diirradiasi laser Nd-YAG (model CFR 200, 1064nm dan emisinya (Pb I 405.7 nm ditangkap spektrometer HR 2500++ yang kemudian ditampilkan dalam intensitas fungsi panjang gelombang. Hasil penelitian menunjukkan bahwa energi laser, arus listrik dan waktu deposisi proses elektrolisis yang optimum untuk karakterisasi unsur Pb masing - masing adalah 100 mJ, 5,28 mA dan 15 menit. Aplikasi metode ini untuk analisis kuantitatif larutan Pb dengan membuat kurva kalibrasi dari kosentrasi 300 ppm sampai kosentrasi terendah yaitu 0,5 ppm, serta diperoleh deteksi limit sebesar 0,44 ppm. Sebagai perbandingan metode deteksi dengan LIBS ini telah dilakukan analisis dengan metode konvensional dengan menentukan selisih massa katoda sebelum dan sesudah elektrolisis dan diperoleh hasil yang sebanding.ABSTRACTThe aim of this research was to compare between a method of laser-induced breakdown spectroscopy (LIBS and the conventional one to analyse of Plumbum (Pb element resulted from electrolysis process. Electrolysis used copper (Cu and carbon (C as cathode and anode respectively. Plumbum element which was deposited on cathode was irradiated by Nd-YAG laser (model CFR 200, 1064nm and its emission intensity of neutral Pb I 405.7 nm in the plasma was captured by HR 2500++ spectrometer and displayed in a form of intensity as a function of wavelength. The experiment result showed that the optimum condition parameters of electrolysis: laser energy, electric current and electrolysis time duration were 100 mJ, 5.28 mA and 15 minutes respectively. An application of these conditions was done to make calibration curve of Pb element in liquid sample from 300 ppm to 0.5 ppm and resulted a limit of

  4. Measurement of Cerium and Gadolinium in Solid Lithium Chloride-Potassium Chloride Salt Using Laser-Induced Breakdown Spectroscopy (LIBS).

    Science.gov (United States)

    Williams, Ammon; Bryce, Keith; Phongikaroon, Supathorn

    2017-10-01

    Pyroprocessing of used nuclear fuel (UNF) has many advantages-including that it is proliferation resistant. However, as part of the process, special nuclear materials accumulate in the electrolyte salt and present material accountability and safeguards concerns. The main motivation of this work was to explore a laser-induced breakdown spectroscopy (LIBS) approach as an online monitoring technique to enhance the material accountability of special nuclear materials in pyroprocessing. In this work, a vacuum extraction method was used to draw the molten salt (CeCl 3 -GdCl 3 -LiCl-KCl) up into 4 mm diameter Pyrex tubes where it froze. The salt was then removed and the solid salt was measured using LIBS and inductively coupled plasma mass spectroscopy (ICP-MS). A total of 36 samples were made that varied the CeCl 3 and GdCl 3 (surrogates for uranium and plutonium, respectively) concentrations from 0.5 wt% to 5 wt%. From these samples, univariate calibration curves for Ce and Gd were generated using peak area and peak intensity methods. For Ce, the Ce 551.1 nm line using the peak area provided the best calibration curve with a limit of detection (LOD) of 0.099 wt% and a root mean squared error of cross-validation (RMSECV) of 0.197 wt%. For Gd, the best curve was generated using the peak intensities of the Gd 564.2 nm line resulting in a LOD of 0.027 wt% and a RMSECV of 0.295 wt%. The RMSECV for the univariate cases were determined using leave-one-out cross-validation. In addition to the univariate calibration curves, partial least squares (PLS) regression was done to develop a calibration model. The PLS models yielded similar results with RMSECV (determined using Venetian blind cross-validation with 17% left out per split) values of 0.30 wt% and 0.29 wt% for Ce and Gd, respectively. This work has shown that solid pyroprocessing salt can be qualitatively and quantitatively monitored using LIBS. This work has the potential of significantly enhancing

  5. Expanding the biotechnology potential of lactobacilli through comparative genomics of 213 strains and associated genera

    Science.gov (United States)

    Sun, Zhihong; Harris, Hugh M. B.; McCann, Angela; Guo, Chenyi; Argimón, Silvia; Zhang, Wenyi; Yang, Xianwei; Jeffery, Ian B; Cooney, Jakki C.; Kagawa, Todd F.; Liu, Wenjun; Song, Yuqin; Salvetti, Elisa; Wrobel, Agnieszka; Rasinkangas, Pia; Parkhill, Julian; Rea, Mary C.; O'Sullivan, Orla; Ritari, Jarmo; Douillard, François P.; Paul Ross, R.; Yang, Ruifu; Briner, Alexandra E.; Felis, Giovanna E.; de Vos, Willem M.; Barrangou, Rodolphe; Klaenhammer, Todd R.; Caufield, Page W.; Cui, Yujun; Zhang, Heping; O'Toole, Paul W.

    2015-01-01

    Lactobacilli are a diverse group of species that occupy diverse nutrient-rich niches associated with humans, animals, plants and food. They are used widely in biotechnology and food preservation, and are being explored as therapeutics. Exploiting lactobacilli has been complicated by metabolic diversity, unclear species identity and uncertain relationships between them and other commercially important lactic acid bacteria. The capacity for biotransformations catalysed by lactobacilli is an untapped biotechnology resource. Here we report the genome sequences of 213 Lactobacillus strains and associated genera, and their encoded genetic catalogue for modifying carbohydrates and proteins. In addition, we describe broad and diverse presence of novel CRISPR-Cas immune systems in lactobacilli that may be exploited for genome editing. We rationalize the phylogenomic distribution of host interaction factors and bacteriocins that affect their natural and industrial environments, and mechanisms to withstand stress during technological processes. We present a robust phylogenomic framework of existing species and for classifying new species. PMID:26415554

  6. Lectotypification of three Iberian endemic species belonging to monotypic genera described by Cosson

    Directory of Open Access Journals (Sweden)

    Buira, Antoni

    2015-12-01

    Full Text Available Three lectotypes are here designated for Euzomodendron bourgaeanum Coss., Guiraoa arvensis Coss. and Laserpitium scabrum Cav. (Guillonea scabra (Cav. Coss., whose genera are monospecific and endemic to the Iberian Peninsula. The selected types of the two former species are kept at P and belong to Cosson’s personal herbarium, whilst the last one is kept at MA and belongs to the historical herbarium of Cavanilles.Se designan los lectótipos de Euzomodendron bourgaeanum Coss., Guiraoa arvensis Coss. y Laserpitium scabrum Cav. (Guillonea scabra (Cav. Coss., cuyos géneros son monoespecíficos y endémicos de la Península Ibérica. Los tipos seleccionados para las dos primeras especies se encuentran en P y pertenecen al herbario personal de Cosson, mientras que el de la última se encuentra en MA y pertenece al herbario histórico de Cavanilles.

  7. Partition functions for quantum gravity, black holes, elliptic genera and Lie algebra homologies

    Energy Technology Data Exchange (ETDEWEB)

    Bonora, L., E-mail: bonora@sissa.it [International School for Advanced Studies (SISSA), Via Bonomea 265, 34136 Trieste (Italy); INFN, Sezione di Trieste (Italy); Bytsenko, A.A., E-mail: abyts@uel.br [Departamento de Fisica, Universidade Estadual de Londrina, Caixa Postal 6001, Londrina (Brazil)

    2011-11-11

    There is a remarkable connection between quantum generating functions of field theory and formal power series associated with dimensions of chains and homologies of suitable Lie algebras. We discuss the homological aspects of this connection with its applications to partition functions of the minimal three-dimensional gravities in the space-time asymptotic to AdS{sub 3}, which also describe the three-dimensional Euclidean black holes, the pure N=1 supergravity, and a sigma model on N-fold generalized symmetric products. We also consider in the same context elliptic genera of some supersymmetric sigma models. These examples can be considered as a straightforward application of the machinery of modular forms and spectral functions (with values in the congruence subgroup of SL(2,Z)) to partition functions represented by means of formal power series that encode Lie algebra properties.

  8. Expanding the biotechnology potential of lactobacilli through comparative genomics of 213 strains and associated genera.

    Science.gov (United States)

    Sun, Zhihong; Harris, Hugh M B; McCann, Angela; Guo, Chenyi; Argimón, Silvia; Zhang, Wenyi; Yang, Xianwei; Jeffery, Ian B; Cooney, Jakki C; Kagawa, Todd F; Liu, Wenjun; Song, Yuqin; Salvetti, Elisa; Wrobel, Agnieszka; Rasinkangas, Pia; Parkhill, Julian; Rea, Mary C; O'Sullivan, Orla; Ritari, Jarmo; Douillard, François P; Paul Ross, R; Yang, Ruifu; Briner, Alexandra E; Felis, Giovanna E; de Vos, Willem M; Barrangou, Rodolphe; Klaenhammer, Todd R; Caufield, Page W; Cui, Yujun; Zhang, Heping; O'Toole, Paul W

    2015-09-29

    Lactobacilli are a diverse group of species that occupy diverse nutrient-rich niches associated with humans, animals, plants and food. They are used widely in biotechnology and food preservation, and are being explored as therapeutics. Exploiting lactobacilli has been complicated by metabolic diversity, unclear species identity and uncertain relationships between them and other commercially important lactic acid bacteria. The capacity for biotransformations catalysed by lactobacilli is an untapped biotechnology resource. Here we report the genome sequences of 213 Lactobacillus strains and associated genera, and their encoded genetic catalogue for modifying carbohydrates and proteins. In addition, we describe broad and diverse presence of novel CRISPR-Cas immune systems in lactobacilli that may be exploited for genome editing. We rationalize the phylogenomic distribution of host interaction factors and bacteriocins that affect their natural and industrial environments, and mechanisms to withstand stress during technological processes. We present a robust phylogenomic framework of existing species and for classifying new species.

  9. Pollen storages in nests of bees of the genera Partamona, Scaura and Trigona (Hymenoptera, Apidae

    Directory of Open Access Journals (Sweden)

    André Rodrigo Rech

    2011-09-01

    Full Text Available Bees and angiosperms established a mutualistic relationship along the evolutionary time. The aim of this study is to contribute for the understanding of this relation analyzing pollen stored by stingless bees colonies distributed along the Rio Negro. Fourteen species of Meliponini from the genera Partamona, Scaura, and Trigona were studied with regard to the content of pollen pots. The pollen material was removed from the pollen pots, homogenized, and prepared according to the usual acetolysis technique. The overlap of the trophic niche and the grouping of species by similarity of niches was calculated. The identification revealed 78 pollen types belonging to 36 families, being 37 types attractive and 16 considered as promoters of a temporary specialization event. With the results, it was possible to indicate a list of important plants for meliponiculture in the Amazon.

  10. Review: hepatoprotective and microbiological studies of three genera: Equisetum, Lycopodium, and Gentiana

    Directory of Open Access Journals (Sweden)

    Maria SUCIU

    2012-11-01

    Full Text Available Liver injury treatments are among the most important of today’s research domains, because with every passing year there is a more acute need for liver transplants. Many of the everyday drugs that people use, and all the toxic influences and unhealthy food lead to some form of liver disorder. That is why today’s attention is drawn to the potentials of a few miracle plants that have the ability to reduce or cure liver damage. Equisetum, Lycopodium and Gentiana genera species are well known homeopathic plants in the Northern Hemisphere. Their properties are used in many disorders, and in the recent studies they are tested for their microbiological and hepatic curative actions.

  11. Symbiotic effectiveness of rhizobial mutualists varies in interactions with native Australian legume genera.

    Directory of Open Access Journals (Sweden)

    Peter H Thrall

    Full Text Available BACKGROUND AND OBJECTIVES: Interactions between plants and beneficial soil organisms (e.g. rhizobial bacteria, mycorrhizal fungi are models for investigating the ecological impacts of such associations in plant communities, and the evolution and maintenance of variation in mutualisms (e.g. host specificity and the level of benefits provided. With relatively few exceptions, variation in symbiotic effectiveness across wild host species is largely unexplored. METHODS: We evaluated these associations using representatives of several legume genera which commonly co-occur in natural ecosystems in south-eastern Australia and an extensive set of rhizobial strains isolated from these hosts. These strains had been previously assigned to specific phylotypes on the basis of molecular analyses. In the first of two inoculation experiments, the growth responses of each host species was evaluated with rhizobial strains isolated from that species. The second experiment assessed performance across genera and the extent of host specificity using a subset of these strains. RESULTS: While host growth responses to their own (sympatric isolates varied considerably, rhizobial phylotype was a significant predictor of symbiotic performance, indicating that bacterial species designations on the basis of molecular markers have ecological importance. Hosts responded in qualitatively different ways to sympatric and allopatric strains of rhizobia, ranging from species with a clear preference for their own strains, to those that were broad generalists, through to species that grew significantly better with allopatric strains. CONCLUSION: Theory has focused on trade-offs between the provision of benefits and symbiont competitive ability that might explain the persistence of less beneficial strains. However, differences in performance among co-occurring host species could also drive such patterns. Our results thus highlight the likely importance of plant community structure in

  12. Long-Wave Infrared (LWIR) Molecular Laser-Induced Breakdown Spectroscopy (LIBS) Emissions of Thin Solid Explosive Powder Films Deposited on Aluminum Substrates.

    Science.gov (United States)

    Yang, Clayton S-C; Jin, Feng; Trivedi, Sudhir B; Brown, Ei E; Hommerich, Uwe; Tripathi, Ashish; Samuels, Alan C

    2017-04-01

    Thin solid films made of high nitro (NO 2 )/nitrate (NO 3 ) content explosives were deposited on sand-blasted aluminum substrates and then studied using a mercury-cadmium-telluride (MCT) linear array detection system that is capable of rapidly capturing a broad spectrum of atomic and molecular laser-induced breakdown spectroscopy (LIBS) emissions in the long-wave infrared region (LWIR; ∼5.6-10 µm). Despite the similarities of their chemical compositions and structures, thin films of three commonly used explosives (RDX, HMX, and PETN) studied in this work can be rapidly identified in the ambient air by their molecular LIBS emission signatures in the LWIR region. A preliminary assessment of the detection limit for a thin film of RDX on aluminum appears to be much lower than 60 µg/cm 2 . This LWIR LIBS setup is capable of rapidly probing and charactering samples without the need for elaborate sample preparation and also offers the possibility of a simultaneous ultraviolet visible and LWIR LIBS measurement.

  13. Laser-induced breakdown spectroscopy (LIBS) analysis of calcium ions dissolved in water using filter paper substrates: an ideal internal standard for precision improvement.

    Science.gov (United States)

    Choi, Daewoong; Gong, Yongdeuk; Nam, Sang-Ho; Han, Song-Hee; Yoo, Jonghyun; Lee, Yonghoon

    2014-01-01

    We report an approach for selecting an internal standard to improve the precision of laser-induced breakdown spectroscopy (LIBS) analysis for determining calcium (Ca) concentration in water. The dissolved Ca(2+) ions were pre-concentrated on filter paper by evaporating water. The filter paper was dried and analyzed using LIBS. By adding strontium chloride to sample solutions and using a Sr II line at 407.771 nm for the intensity normalization of Ca II lines at 393.366 or 396.847 nm, the analysis precision could be significantly improved. The Ca II and Sr II line intensities were mapped across the filter paper, and they showed a strong positive shot-to-shot correlation with the same spatial distribution on the filter paper surface. We applied this analysis approach for the measurement of Ca(2+) in tap, bottled, and ground water samples. The Ca(2+) concentrations determined using LIBS are in good agreement with those obtained from flame atomic absorption spectrometry. Finally, we suggest a homologous relation of the strongest emission lines of period 4 and 5 elements in groups IA and IIA based on their similar electronic structures. Our results indicate that the LIBS can be effectively applied for liquid analysis at the sub-parts per million level with high precision using a simple drying of liquid solutions on filter paper and the use of the correct internal standard elements with the similar valence electronic structure with respect to the analytes of interest.

  14. Creating Tomorrow's Technologists: Contrasting Information Technology Curriculum in North American Library and Information Science Graduate Programs against Code4lib Job Listings

    Science.gov (United States)

    Maceli, Monica

    2015-01-01

    This research study explores technology-related course offerings in ALA-accredited library and information science (LIS) graduate programs in North America. These data are juxtaposed against a text analysis of several thousand LIS-specific technology job listings from the Code4lib jobs website. Starting in 2003, as a popular library technology…

  15. Exploring the Relationship between Patron Type, Carnegie Classification, and Satisfaction with Library Services: An Analysis of LibQUAL+® Results

    Science.gov (United States)

    Guder, Christopher S.

    2012-01-01

    The purpose of this study was to explore how faculty and students responded to the Information Control section of the LibQUAL+® survey at two libraries with different Carnegie Classifications. As one of the institutions being studied was considering a shift from a research institution to one more focused on teaching and learning, this study used…

  16. Comparative Study of Elemental Nutrients in Organic and Conventional Vegetables Using Laser-Induced Breakdown Spectroscopy (LIBS).

    Science.gov (United States)

    Bhatt, Chet R; Alfarraj, Bader; Ghany, Charles T; Yueh, Fang Y; Singh, Jagdish P

    2017-04-01

    In this study, the laser-induced breakdown spectroscopy (LIBS) technique was used to identify and compare the presence of major nutrient elements in organic and conventional vegetables. Different parts of cauliflowers and broccolis were used as working samples. Laser-induced breakdown spectra from these samples were acquired at optimum values of laser energy, gate delay, and gate width. Both univariate and multivariate analyses were performed for the comparison of these organic and conventional vegetable flowers. Principal component analysis (PCA) was taken into account for multivariate analysis while for univariate analysis, the intensity of selected atomic lines of different elements and their intensity ratio with some reference lines of organic cauliflower and broccoli samples were compared with those of conventional ones. In addition, different parts of the cauliflower and broccoli were compared in terms of intensity and intensity ratio of elemental lines.

  17. Quantitative analysis of Al-Si alloy using calibration free laser induced breakdown spectroscopy (CF-LIBS)

    Science.gov (United States)

    Shakeel, Hira; Haq, S. U.; Aisha, Ghulam; Nadeem, Ali

    2017-06-01

    The quantitative analysis of the standard aluminum-silicon alloy has been performed using calibration free laser induced breakdown spectroscopy (CF-LIBS). The plasma was produced using the fundamental harmonic (1064 nm) of the Nd: YAG laser and the emission spectra were recorded at 3.5 μs detector gate delay. The qualitative analysis of the emission spectra confirms the presence of Mg, Al, Si, Ti, Mn, Fe, Ni, Cu, Zn, Sn, and Pb in the alloy. The background subtracted and self-absorption corrected emission spectra were used for the estimation of plasma temperature as 10 100 ± 300 K. The plasma temperature and self-absorption corrected emission lines of each element have been used for the determination of concentration of each species present in the alloy. The use of corrected emission intensities and accurate evaluation of plasma temperature yield reliable quantitative analysis up to a maximum 2.2% deviation from reference sample concentration.

  18. Identification of metal elements by time-resolved LIBS technique in sediments lake the “Cisne”

    Science.gov (United States)

    Pacheco, P.; Arregui, E.; Álvarez, J.; Rangel, N.; Sarmiento, R.

    2017-01-01

    Laser induced breakdown spectroscopy (LIBS), is a kind of spectral method of atomic emission that uses pulses of radiation high energy laser as excitation source. One of the advantages of technical LIBS lies in the possibility of analyse the substances in any State of aggregation, already is solid, liquid or gaseous, even in colloids as aerosols, gels and others. Another advantage over other conventional techniques is the simultaneous analysis of elements present in a sample of multielement. This work is made in the use of this technique for the identification of metal pollutants in the Swan Lake sediment samples, collected by drilling cores. Plasmas were generated by focusing the radiation of Nd: YAG laser with an energy per pulse 13mJ and 4ns duration, wavelength of 532nm. The spectra of radiation from the plasmas of sediment were recorded with an Echelle spectrograph type coupled to an ICCD camera. The delay times were between 0.5μs and 7μs, while the gate width was of 2μs. To ensure the homogeneity of the plasmas, the sediment sample was placed in a positioning system of linear and rotary adjustment of smooth step synchronized with the trigger of the laser pulse. The registration of the spectra of the sediment to different times of delay, allowed to identify the lines prominent of the different elements present in the sample. The analysis of the Spectra allowed the identification of some elements in the sample as if, Ca, Na, Mg, and Al through the measurement of wavelengths of the prominent peaks.

  19. Identification of metal elements by time-resolved LIBS technique in sediments lake the “Cisne”

    International Nuclear Information System (INIS)

    Pacheco, P; Arregui, E; Álvarez, J; Rangel, N; Sarmiento, R

    2017-01-01

    Laser induced breakdown spectroscopy (LIBS), is a kind of spectral method of atomic emission that uses pulses of radiation high energy laser as excitation source. One of the advantages of technical LIBS lies in the possibility of analyse the substances in any State of aggregation, already is solid, liquid or gaseous, even in colloids as aerosols, gels and others. Another advantage over other conventional techniques is the simultaneous analysis of elements present in a sample of multielement. This work is made in the use of this technique for the identification of metal pollutants in the Swan Lake sediment samples, collected by drilling cores. Plasmas were generated by focusing the radiation of Nd: YAG laser with an energy per pulse 13mJ and 4ns duration, wavelength of 532nm. The spectra of radiation from the plasmas of sediment were recorded with an Echelle spectrograph type coupled to an ICCD camera. The delay times were between 0.5μs and 7μs, while the gate width was of 2μs. To ensure the homogeneity of the plasmas, the sediment sample was placed in a positioning system of linear and rotary adjustment of smooth step synchronized with the trigger of the laser pulse. The registration of the spectra of the sediment to different times of delay, allowed to identify the lines prominent of the different elements present in the sample. The analysis of the Spectra allowed the identification of some elements in the sample as if, Ca, Na, Mg, and Al through the measurement of wavelengths of the prominent peaks. (paper)

  20. Application of a spectrum standardization method for carbon analysis in coal using laser-induced breakdown spectroscopy (LIBS).

    Science.gov (United States)

    Li, Xiongwei; Wang, Zhe; Fu, Yangting; Li, Zheng; Liu, Jianmin; Ni, Weidou

    2014-01-01

    Measurement of coal carbon content using laser-induced breakdown spectroscopy (LIBS) is limited by its low precision and accuracy. A modified spectrum standardization method was proposed to achieve both reproducible and accurate results for the quantitative analysis of carbon content in coal using LIBS. The proposed method used the molecular emissions of diatomic carbon (C2) and cyanide (CN) to compensate for the diminution of atomic carbon emissions in high volatile content coal samples caused by matrix effect. The compensated carbon line intensities were further converted into an assumed standard state with standard plasma temperature, electron number density, and total number density of carbon, under which the carbon line intensity is proportional to its concentration in the coal samples. To obtain better compensation for fluctuations of total carbon number density, the segmental spectral area was used and an iterative algorithm was applied that is different from our previous spectrum standardization calculations. The modified spectrum standardization model was applied to the measurement of carbon content in 24 bituminous coal samples. The results demonstrate that the proposed method has superior performance over the generally applied normalization methods. The average relative standard deviation was 3.21%, the coefficient of determination was 0.90, the root mean square error of prediction was 2.24%, and the average maximum relative error for the modified model was 12.18%, showing an overall improvement over the corresponding values for the normalization with segmental spectrum area, 6.00%, 0.75, 3.77%, and 15.40%, respectively.

  1. Laser-induced breakdown spectroscopy (LIBS), part I: review of basic diagnostics and plasma-particle interactions: still-challenging issues within the analytical plasma community.

    Science.gov (United States)

    Hahn, David W; Omenetto, Nicoló

    2010-12-01

    Laser-induced breakdown spectroscopy (LIBS) has become a very popular analytical method in the last decade in view of some of its unique features such as applicability to any type of sample, practically no sample preparation, remote sensing capability, and speed of analysis. The technique has a remarkably wide applicability in many fields, and the number of applications is still growing. From an analytical point of view, the quantitative aspects of LIBS may be considered its Achilles' heel, first due to the complex nature of the laser-sample interaction processes, which depend upon both the laser characteristics and the sample material properties, and second due to the plasma-particle interaction processes, which are space and time dependent. Together, these may cause undesirable matrix effects. Ways of alleviating these problems rely upon the description of the plasma excitation-ionization processes through the use of classical equilibrium relations and therefore on the assumption that the laser-induced plasma is in local thermodynamic equilibrium (LTE). Even in this case, the transient nature of the plasma and its spatial inhomogeneity need to be considered and overcome in order to justify the theoretical assumptions made. This first article focuses on the basic diagnostics aspects and presents a review of the past and recent LIBS literature pertinent to this topic. Previous research on non-laser-based plasma literature, and the resulting knowledge, is also emphasized. The aim is, on one hand, to make the readers aware of such knowledge and on the other hand to trigger the interest of the LIBS community, as well as the larger analytical plasma community, in attempting some diagnostic approaches that have not yet been fully exploited in LIBS.

  2. Fast detection and characterization of organic and inorganic gunshot residues on the hands of suspects by CMV-GC-MS and LIBS.

    Science.gov (United States)

    Tarifa, Anamary; Almirall, José R

    2015-05-01

    A rapid method for the characterization of both organic and inorganic components of gunshot residues (GSR) is proposed as an alternative tool to facilitate the identification of a suspected shooter. In this study, two fast screening methods were developed and optimized for the detection of organic compounds and inorganic components indicative of GSR presence on the hands of shooters and non-shooters. The proposed methods consist of headspace extraction of volatile organic compounds using a capillary microextraction of volatiles (CMV) device previously reported as a high-efficiency sampler followed by detection by GC-MS. This novel sampling technique has the potential to yield fast results (LIBS) screening method for the detection of the inorganic components indicative of the presence of GSR (Sb, Pb and Ba) is described. The sampling method for the inorganics consists of liquid extraction of the target elements from the same cotton swabs (previously analyzed for VOCs) and an additional 30 swab samples followed by spiking 1μL of the extract solution onto a Teflon disk and then analyzed by LIBS. Advantages of LIBS include fast analysis (~12s per sample) and high selectivity and sensitivity, with expected LODs 0.1-18ng for each of the target elements after sampling. The analytical performance of the LIBS method is also compared to previously reported methods (inductively coupled plasma-optical emission spectroscopy). The combination of fast CMV sampling, unambiguous organic compound identification with GC-MS and fast LIBS analysis provides the basis for a new comprehensive screening method for GSR. Copyright © 2015 Forensic Science Society. Published by Elsevier Ireland Ltd. All rights reserved.

  3. Monitoring uranium, hydrogen, and lithium and their isotopes using a compact laser-induced breakdown spectroscopy (LIBS) probe and high-resolution spectrometer.

    Science.gov (United States)

    Cremers, David A; Beddingfield, Alan; Smithwick, Robert; Chinni, Rosemarie C; Jones, C Randy; Beardsley, Burt; Karch, Larry

    2012-03-01

    The development of field-deployable instruments to monitor radiological, nuclear, and explosive (RNE) threats is of current interest for a number of assessment needs such as the on-site screening of suspect facilities and nuclear forensics. The presence of uranium and plutonium and radiological materials can be determined through monitoring the elemental emission spectrum using relatively low-resolution spectrometers. In addition, uranium compounds, explosives, and chemicals used in nuclear fuel processing (e.g., tributyl-phosphate) can be identified by applying chemometric analysis to the laser-induced breakdown (LIBS) spectrum recorded by these spectrometers. For nuclear forensic applications, however, isotopes of U and Pu and other elements (e.g., H and Li) must also be determined, requiring higher resolution spectrometers given the small magnitude of the isotope shifts for some of these elements (e.g., 25 pm for U and 13 pm for Pu). High-resolution spectrometers will be preferred for several reasons but these must fit into realistic field-based analysis scenarios. To address the need for field instrumentation, we evaluated a previously developed field-deployable hand-held LIBS interrogation probe combined with two relatively new high-resolution spectrometers (λ/Δλ ~75,000 and ~44,000) that have the potential to meet field-based analysis needs. These spectrometers are significantly smaller and lighter in weight than those previously used for isotopic analysis and one unit can provide simultaneous wide spectral coverage and high resolution in a relatively small package. The LIBS interrogation probe was developed initially for use with low resolution compact spectrometers in a person-portable backpack LIBS instrument. Here we present the results of an evaluation of the LIBS probe combined with a high-resolution spectrometer and demonstrate rapid detection of isotopes of uranium and hydrogen and highly enriched samples of (6)Li and (7)Li. © 2012 Society for

  4. New ways for the quantification by the laser-induced plasma spectroscopy; Neue Wege zur Quantifizierung mit der laserinduzierten Plasmaspektroskopie (LIBS)

    Energy Technology Data Exchange (ETDEWEB)

    Mueller, Maike

    2010-04-27

    Laser Induced Breakdown Spectroscopy (LIBS) is capable of a fast and multielement analysis of various samples types and matrices which makes the method particularly attractive for industrial process analysis. However, for LIBS to become well accepted as an analytical method some issues in calibration and understanding of the underlying transient plasma processes have to be solved. The objective of this work was to identify influential instrumental parameters and plasma conditions in order to improve the overall quantitative performance of LIBS. As the spectral sensitivity and signal-to-noise ratio of the detector represents a decisive element for the application of LIBS in an industrial environment, two detectors, an ICCD and CCD camera, were compared. In combination with a high-resolution echelle spectrograph, the superior or at least equivalent efficiency of the non-intensified CCD was experimentally demonstrated and supported by corresponding plasma simulations. Further investigations of the plasma expansion under different atmospheric conditions revealed that the geometry of observing the expanding plasma influences the sensitivity and reproducibility of the measurements considerably. The diagnostics of self-absorbed spectral lines and their use for calibration purposes were studied with a mirror-based duplication method and a statistical line shape analysis employing linear correlation. The linear correlation approach displayed good performance for identifying the on-set of self absorption in comparison to the duplication method. As matrixmatched reference materials are essential to validate laser ablation methods, two novel preparations of individual calibration standards based on a copper-and polyacrylamide matrix were tested for their applicability to LIBS. (orig.)

  5. Chemotaxonomy of three genera of the Annonaceae family using self-organizing maps and 13C NMR data of diterpenes

    International Nuclear Information System (INIS)

    Scotti, Luciana; Tavares, Josean Fechine; Silva, Marcelo Sobral da; Falcao, Emanuela Viana; Silva, Luana de Morais e; Soares, Gabriela Cristina da Silva; Scotti, Marcus Tullius

    2012-01-01

    The Annonaceae family is distributed throughout Neotropical regions of the world. In Brazil, it covers nearly all natural formations particularly Annona, Xylopia and Polyalthia and is characterized chemically by the production of sources of terpenoids (mainly diterpenes), alkaloids, steroids, polyphenols and, flavonoids. Studies from 13 C NMR data of diterpenes related with their botanical occurrence were used to generate self-organizing maps. Results corroborate those in the literature obtained from morphological and molecular data for three genera and the model can be used to project other diterpenes. Therefore, the model produced can predict which genera are likely to contain a compound. (author)

  6. Bolivian Rhinotragini VIII: new genera and species related to Pseudophygopoda Tavakilian & Peñaherrera-Leiva, 2007 (Coleoptera, Cerambycidae

    Directory of Open Access Journals (Sweden)

    Robin O.S. Clarke

    2014-01-01

    Full Text Available Pseudophygopoda Tavakilian & Peñaherrera-Leiva, 2007 is redescribed. Four new, closely related genera are described. Panamapoda gen. nov., with P. panamensis (Giesbert, 1996; Paraphygopoda gen nov., with Paraphygopoda nappae sp. nov., P. albitarsis (Klug, 1825, P. viridimicans (Fisher, 1952, and, provisionally, P. longipennis (Zajciw, 1963; Para melitta gen. nov., with Paramelitta wappesi sp. nov., and P. aglaia (Newman, 1840; and Phygomelitta gen. nov., with one species, P. triangularis (Fuchs, 1961. All the species are illustrated (including genitalia; and keys to the genera, and their species, are provided.

  7. Neotropical genera of Naucoridae (Hemiptera: Heteroptera: Nepomorpha): new species of Placomerus and Procryphocricos from Guyana and Venezuela.

    Science.gov (United States)

    Sites, Robert W; Camacho, Jesús

    2014-01-09

    The Neotropical fauna of saucer bugs (Naucoridae) currently includes four monotypic genera. Recent extensive collecting in Venezuela has produced three new species in two of these genera. In addition, undetermined Guyanan specimens of one of the new species were found in the United States National Museum of Natural History. Thus, described here are Placomerus obscuratus n. sp. from Guyana and Venezuela with brachypterous and macropterous hindwing forms, and two species of Procryphocricos from Venezuela. Procryphocricos quiu n. sp. is described from the brachypterous forewing form and Procryphocricos macoita n. sp. from both brachypterous and macropterous forms. Previously described species also are discussed.

  8. New genera and species of gall midges (Diptera, Cecidomyiidae from three restingas of Rio de Janeiro State, Brazil

    Directory of Open Access Journals (Sweden)

    Valéria Cid Maia

    2001-07-01

    Full Text Available Five new genera and fourteen new species of gall midges from restingas of Rio de Janeiro State are described. The larva, pupa, male, female and gall are described for each species. The new genera are: Arrabidaeamyia, Epihormomyia, Manilkaramyia, Mayteniella and Parazalepidota. The new species are: Arrabidaeamyia serrata, Asphondylia peploniae, Clinodiplosis diodiae, Clinodiplosis profusa, Clusiamyia granulosa, Dasineura couepiae, Epihormomyia miconiae, Lopesia grandis, Lopesia marginalis, Lopesia singularis, Manilkaramyia notabilis, Mayteniella distincta, Parazalepidota clusiae and Paulliniamyia ampla. Also, the larva of a previously described species, Clusiamyia nitida Maia, 1996 is described and Asphondylia byrsonimae Maia & Couri is transferred to Bruggmaniella.

  9. Testing deep-sea biodiversity paradigms on abyssal nematode genera and Acantholaimus species

    Science.gov (United States)

    Lins, Lidia; da Silva, Maria Cristina; Neres, Patrícia; Esteves, André Morgado; Vanreusel, Ann

    2018-02-01

    Biodiversity patterns in the deep sea have been extensively studied in the last decades. In this study, we investigated whether reputable concepts in deep-sea ecology also explain diversity and distribution patterns of nematode genera and species in the abyss. Among them, three paradigms were tackled: (1) the deep sea is a highly diverse environment at a local scale, while on a regional and even larger geographical scale, species and genus turnover is limited; (2) the biodiversity of deep-sea nematode communities changes with the nature and amount of organic matter input from the surface; and (3) patch-mosaic dynamics of the deep-sea environment drive local diversity. To test these hypotheses, diversity and density of nematode assemblages and of species of the genus Acantholaimus were studied along two abyssal E-W transects. These two transects were situated in the Southern Ocean ( 50°S) and the North Atlantic ( 10°N). Four different hierarchical scales were used to compare biodiversity: at the scale of cores, between stations from the same region, and between regions. Results revealed that the deep sea harbours a high diversity at a local scale (alpha diversity), but that turnover can be shaped by different environmental drivers. Therefore, these results question the second part of the paradigm about limited species turnover in the deep sea. Higher surface primary productivity was correlated with greater nematode densities, whereas diversity responses to the augmentation of surface productivity showed no trend. Areas subjected to a constant and low food input revealed similar nematode communities to other oligotrophic abyssal areas, while stations under high productivity were characterized by different dominant genera and Acantholaimus species, and by a generally low local diversity. Our results corroborate the species-energy hypothesis, where productivity can set a limit to the richness of an ecosystem. Finally, we observed no correlation between sediment

  10. Diatoms from the Colombian and Peruvian Amazon: the Genera Encyonema, Encyonopsis and Gomphonema (Cymbellales: Bacillariophyceae

    Directory of Open Access Journals (Sweden)

    Amelia A Vouilloud

    2010-03-01

    Full Text Available Diatoms from the Colombian and Peruvian Amazon: the Genera Encyonema, Encyonopsis and Gomphonema (Cymbellales, Bacillariophyceae. The diatom flora of the Colombian and Peruvian Amazon is far less studied than the flora of the Brazilian sector of the basin. Here we present results related to the genera Encyonema, Encyonopsis and Gomphonema. Plankton and periphyton samples were collected in lotic and lentic waterbodies from the Amazonian-Andean region, the Amazon River, Japurá River and Porvenir River basins during 1993, 1994, 2001 and 2003. At each sampling station pH, temperature, water transparency and conductivity were registered. Samples were analyzed with phase contrast microscope (LM and scanning electron microscope (SEM. Ten taxa are new records for the area; Encyonema for the Peruvian and Colombian Amazon and Encyonopsis for the Colombian Sector. Encyonema neogracile var. tenuipunctatum, E. vulgare, Encyonopsis frequentis, Gomphonema augur var. sphaerophorum and G. contraturris are recorded for the first time in Colombia; Encyonema venezolanum and G. neoapiculatum in Colombia and Peru and the latter also for Amazonia. E. angustecapitatum was mentioned in Colombia before at a pond located at 3000m asl. We describe a new species from Porvenir River, Amazonas, Colombia: Encyonema amazonianum. Rev. Biol. Trop. 58 (1: 45-62. Epub 2010 March 01.La flora diatomológica de la Amazonia Colombiana y Peruana está mucho menos estudiada que la flora del sector brasilero. Se presentan los resultados de los géneros Encyonema, Encyonopsis y Gomphonema. Muestras de plancton y perifiton fueron colectadas en ambientes lóticos y lénticos de la región amazónica-andina, en los ríos Amazonas, Japurá y Porvenir durante 1993, 1994, 2001 y 2003. En cada estación de muestreo se realizaron mediciones de pH, temperatura, transparencia del agua y conductividad. Las muestras fueron analizadas con microscopio óptico con contraste de fases y microscopio electr

  11. Updates of the KArLE Experiment: New Libs Calibration Under High Vacuum for the Quantification of Potassium in Basalt for In Situ Geochronology

    Science.gov (United States)

    Devismes, D.; Cohen, B. A.; Li, Z.-H.; Miller, J. S.

    2014-01-01

    In planetary exploration, in situ absolute geochronology is one of the main important measurements that needs to be accomplished. Until now, on Mars, the age of the surface is only determined by crater density counting, which gives relative ages. These ages can have a lot of uncertainty as they depend on many parameters. More than that, the curves must be ties to absolute ages. Thus far, only the lost lander Beagle 2 was designed to conduct absolute geochronology measurements, though some recent attempts using MSL Curiosity show that this investigation is feasible and should be strongly encouraged for future flight. Experimental: The Potassium (K)-Argon Laser Experiment (KArLE) is being developed at MSFC through the NASA Planetary Instrument Definition and Development Program (PIDDP). The goal of this experiment is to provide in situ geochronology based on the K-Ar method. A laser ablates a rock under high vacuum, creating a plasma which is sensed by an optical spectrometer to do Laser Induced Breakdown Spectroscopy (LIBS). The ablated material frees gases, including radiogenic 40Ar,which is measured by a mass spectrometer (MS). As the potassium is a content and the 40Ar is a quantity, the ablated mass needed in order to relate them. The mass is given by the product of the ablated volume by the density of this material. So we determine the mineralogy of the ablated material with the LIBS spectra and images and calculate its density. The volume of the pit is measured by using microscopy. LIBS measurement of K under high vacuum: Three independant projects [1, 2, 3] including KArLE, are developing geochronological instruments based on this LA-LIBS-MS method. Despite several differences in their setup, all of them have validated the methods with analyses and ages. However, they all described difficulties with the LIBS measurements of K [3,4]. At ambient pressure, the quantification of K by LIBS on geological materials can be accurate [5]. However the protocol of the LA-LIBS

  12. Ticks associated with macquarie island penguins carry arboviruses from four genera.

    Directory of Open Access Journals (Sweden)

    Lee Major

    Full Text Available Macquarie Island, a small subantarctic island, is home to rockhopper, royal and king penguins, which are often infested with the globally distributed seabird tick, Ixodes uriae. A flavivirus, an orbivirus, a phlebovirus, and a nairovirus were isolated from these ticks and partial sequences obtained. The flavivirus was nearly identical to Gadgets Gully virus, isolated some 30 year previously, illustrating the remarkable genetic stability of this virus. The nearest relative to the orbivirus (for which we propose the name Sandy Bay virus was the Scottish Broadhaven virus, and provided only the second available sequences from the Great Island orbivirus serogroup. The phlebovirus (for which we propose the name Catch-me-cave virus and the previously isolated Precarious Point virus were distinct but related, with both showing homology with the Finnish Uukuniemi virus. These penguin viruses provided the second and third available sequences for the Uukuniemi group of phleboviruses. The nairovirus (for which we propose the name Finch Creek virus was shown to be related to the North American Tillamook virus, the Asian Hazara virus and Nairobi sheep disease virus. Macquarie Island penguins thus harbour arboviruses from at least four of the seven arbovirus-containing genera, with related viruses often found in the northern hemisphere.

  13. Genomic organization and dynamics of repetitive DNA sequences in representatives of three Fagaceae genera.

    Science.gov (United States)

    Alves, Sofia; Ribeiro, Teresa; Inácio, Vera; Rocheta, Margarida; Morais-Cecílio, Leonor

    2012-05-01

    Oaks, chestnuts, and beeches are economically important species of the Fagaceae. To understand the relationship between these members of this family, a deep knowledge of their genome composition and organization is needed. In this work, we have isolated and characterized several AFLP fragments obtained from Quercus rotundifolia Lam. through homology searches in available databases. Genomic polymorphisms involving some of these sequences were evaluated in two species of Quercus, one of Castanea, and one of Fagus with specific primers. Comparative FISH analysis with generated sequences was performed in interphase nuclei of the four species, and the co-immunolocalization of 5-methylcytosine was also studied. Some of the sequences isolated proved to be genus-specific, while others were present in all the genera. Retroelements, either gypsy-like of the Tat/Athila clade or copia-like, are well represented, and most are dispersed in euchromatic regions of these species with no DNA methylation associated, pointing to an interspersed arrangement of these retroelements with potential gene-rich regions. A particular gypsy-sequence is dispersed in oaks and chestnut nuclei, but its confinement to chromocenters in beech evidences genome restructuring events during evolution of Fagaceae. Several sequences generated in this study proved to be good tools to comparatively study Fagaceae genome organization.

  14. Molecular phylogeny of Glossodoris (Ehrenberg, 1831) nudibranchs and related genera reveals cryptic and pseudocryptic species complexes

    KAUST Repository

    Matsuda, Shayle B.; Gosliner, Terrence M.

    2017-01-01

    Chromodorid nudibranchs (Chromodorididae) are brightly coloured sea slugs that live in some of the most biodiverse and threatened coral reefs on the planet. However, the evolutionary relationships within this family have not been well understood, especially in the genus Glossodoris. Members of Glossodoris have experienced large-scale taxonomic instability over the last century and have been the subject of repeated taxonomic changes, in part due to morphological characters being the sole traditional taxonomic sources of data. Changing concepts of traditional generic boundaries based on morphology also have contributed to this instability. Despite recent advances in molecular systematics, many aspects of chromodorid taxonomy remain poorly understood, particularly at the traditional species and generic levels. In this study, 77 individuals comprising 32 previously defined species were used to build the most robust phylogenetic tree of Glossodoris and related genera using mitochondrial genes cytochrome c oxidase subunit I and 16S, and the nuclear gene 28S. Bayesian inference, maximum likelihood, and maximum parsimony analyses verify the most recent hypothesized evolutionary relationships within Glossodoris. Additionally, a pseudocryptic and cryptic species complex within Glossodoris cincta and a pseudocryptic complex within Glossodoris pallida emerged, and three new species of Doriprismatica are identified.

  15. The tribe Acutalini Fowler (Homoptera, Membracidae, Smiliinae: new genera, new species and some nomenclatural changes

    Directory of Open Access Journals (Sweden)

    Albino M Sakakibara

    1997-09-01

    Full Text Available The tribe Acutalini Fowler is redescribed as well as the genera Acutalis Fairmaire, Euritea Stål, and Thrasymedes Kirkaldy. The following new taxa and nomenclatural changes are presented: Thrasymedes mexicana sp.n. (from Mexico, Oaxaca; Bordonia gen.n., with B. venezuelana sp.n. (type-species (from Venezuela, Portachuelo, B. clypeata sp.n. (from Colombia, Cuesta Boba, B. majuscula sp.n. (from Venezuela, Portachuelo, and Cornutalis gen.n., with C. cauca sp.n. (type-species (from Colombia, Cauca, and C. validu sp.n. (from Ecuador, Sto. Domingo. Acutalis fusconervosa Fairmaire, 1846 = Horiola venosa Walker, 1858, syn.n.; Euritea munda (Walker, 1858 = Stictolobus nitidus Funkhouser, 1940, syn.n.; Bordonia nigricosta (Goding, 1926, comb.n.; Bordonia virescens (Funkhouser, 1940, comb.n.. One species is transferred to Smiliinae-Ceresini: Tapinolobus curvispina (Walker, 1858, comb.n. (formerly in Thrasymedes = Tapinolobus fasciatus Sakakibara, 1969, syn.n.; another one is transferred to Darninae-Cymbomorphini: Eumela darnioides (Walker, 1858, comb.n. (formerly in Euritea.

  16. Functional characterization of Gram-negative bacteria from different genera as multiplex cadmium biosensors.

    Science.gov (United States)

    Bereza-Malcolm, Lara; Aracic, Sanja; Kannan, Ruban; Mann, Gülay; Franks, Ashley E

    2017-08-15

    Widespread presence of cadmium in soil and water systems is a consequence of industrial and agricultural processes. Subsequent accumulation of cadmium in food and drinking water can result in accidental consumption of dangerous concentrations. As such, cadmium environmental contamination poses a significant threat to human health. Development of microbial biosensors, as a novel alternative method for in situ cadmium detection, may reduce human exposure by complementing traditional analytical methods. In this study, a multiplex cadmium biosensing construct was assembled by cloning a single-output cadmium biosensor element, cadRgfp, and a constitutively expressed mrfp1 onto a broad-host range vector. Incorporation of the duplex fluorescent output [green and red fluorescence proteins] allowed measurement of biosensor functionality and viability. The biosensor construct was tested in several Gram-negative bacteria including Pseudomonas, Shewanella and Enterobacter. The multiplex cadmium biosensors were responsive to cadmium concentrations ranging from 0.01 to 10µgml -1 , as well as several other heavy metals, including arsenic, mercury and lead at similar concentrations. The biosensors were also responsive within 20-40min following exposure to 3µgml -1 cadmium. This study highlights the importance of testing biosensor constructs, developed using synthetic biology principles, in different bacterial genera. Copyright © 2017 Elsevier B.V. All rights reserved.

  17. Resistance of Citrus and Related Genera to Diaphorina citri Kuwayama (Hemiptera: Liviidae).

    Science.gov (United States)

    Borgoni, P C; Vendramim, J D; Lourencão, A L; Machado, M A

    2014-10-01

    The present study was developed to evaluate the resistance of the following genotypes of Citrus and related genera to this pest: 'Pera,' 'Natal', and 'Washington Navel' oranges (Citrus sinensis), 'Marsh Seedless' grapefruit (Citrus paradisi), hardy orange 'Rubidoux' (Poncirus trifoliata), kumquat (Fortunella margarita Swingle), citrumelo 'Swingle' (C. paradisi x P. trifoliata), and citrange 'Troyer' (P. trifoliata x C. sinensis). The experiments were performed in greenhouses with plants grafted onto 'Rangpur' lime (Citrus limonia) and placed individually in voile cages. The preference for oviposition in a no-choice test, and the effect of genotype were evaluated. The egg-adult cycle was monitored to determine the effect of genotype on the biology of the insect. Poncirus 'Rubidoux' was the least preferred genotype for oviposition; reduced number of eggs was also found to occur on citrange 'Troyer', and 'Marsh Seedless' was the genotype with the most eggs. No significant variation in the duration of the embryonic period was observed; however, a difference in the viability of eggs was found, with the lowest egg viabilities on 'Swingle.' Kumquat and 'Marsh Seedless' genotypes were correlated with increased durations of the nymphal phase, however, there was no difference in the survival of this phase. Fecundity of females on 'Troyer', 'Swingle', and kumquat was reduced. Considering all of the evaluated parameters, it was concluded that cultivars of sweet orange are the most susceptible genotypes to Diaphorina citri. Regarding oviposition, P. trifoliata 'Rubidoux' showed resistance of the antixenosis type.

  18. [Phylogenetic relationships among the genera of Taxodiaceae and Cupressaceae from 28S rDNA sequences].

    Science.gov (United States)

    Li, Chun-Xiang; Yang, Qun

    2003-03-01

    DNA sequences from 28S rDNA were used to assess relationships between and within traditional Taxodiaceae and Cupressaceae s.s. The MP tree and NJ tree generally are similar to one another. The results show that Taxodiaceae and Cupressaceae s.s. form a monophyletic conifer lineage excluding Sciadopitys. In the Taxodiaceae-Cupressaceae s.s. monophyletic group, the Taxodiaceae is paraphyletic. Taxodium, Glyptostrobus and Cryptomeria forming a clade(Taxodioideae), in which Glyptostrobus and Taxodium are closely related and sister to Cryptomeria; Sequoia, Sequoiadendron and Metasequoia are closely related to each other, forming another clade (Sequoioideae), in which Sequoia and Sequoiadendron are closely related and sister to Metasequoia; the seven genera of Cupressaceae s.s. are found to be closely related to form a monophyletic lineage (Cupressoideae). These results are basically similar to analyses from chloroplast gene data. But the relationships among Taiwania, Sequoioideae, Taxodioideae, and Cupressoideae remain unclear because of the slow evolution rate of 28S rDNA, which might best be answered by sequencing more rapidly evolving nuclear genes.

  19. Molecular phylogeny of Glossodoris (Ehrenberg, 1831) nudibranchs and related genera reveals cryptic and pseudocryptic species complexes

    KAUST Repository

    Matsuda, Shayle B.

    2017-03-01

    Chromodorid nudibranchs (Chromodorididae) are brightly coloured sea slugs that live in some of the most biodiverse and threatened coral reefs on the planet. However, the evolutionary relationships within this family have not been well understood, especially in the genus Glossodoris. Members of Glossodoris have experienced large-scale taxonomic instability over the last century and have been the subject of repeated taxonomic changes, in part due to morphological characters being the sole traditional taxonomic sources of data. Changing concepts of traditional generic boundaries based on morphology also have contributed to this instability. Despite recent advances in molecular systematics, many aspects of chromodorid taxonomy remain poorly understood, particularly at the traditional species and generic levels. In this study, 77 individuals comprising 32 previously defined species were used to build the most robust phylogenetic tree of Glossodoris and related genera using mitochondrial genes cytochrome c oxidase subunit I and 16S, and the nuclear gene 28S. Bayesian inference, maximum likelihood, and maximum parsimony analyses verify the most recent hypothesized evolutionary relationships within Glossodoris. Additionally, a pseudocryptic and cryptic species complex within Glossodoris cincta and a pseudocryptic complex within Glossodoris pallida emerged, and three new species of Doriprismatica are identified.

  20. Floral ontogeny in legume genera Petalostylis, Labichea, and Dialium (Caesalpinioideae: Cassieae), a series in floral reduction.

    Science.gov (United States)

    Tucker, S

    1998-02-01

    Floral ontogeny of taxa of two subtribes (Labicheinae, Dialiinae) of caesalpinioid tribe Cassieae, characterized by reduced number of floral organs, was compared. All three taxa studied are distichous; Petalostylis labicheoides flowers are solitary in leaf axils, Labichea lanceolata has few-flowered racemes, and Dialium guineense has numerous-flowered cymes. The first sepal primordium in each is initiated abaxially and nonmedianly. Order of organogenesis in Petalostylis is: five sepals bidirectionally, five petals and carpel simultaneously, then five stamens bidirectionally, starting abaxially. The order in Labichea is: five sepals helically (one lagging in time), five petals unidirectionally starting abaxially, the carpel and petals concurrently, then two stamens successively, starting laterally. Order in Dialium is: five sepals bidirectionally, the single petal adaxially, and lastly the carpel and two stamens concurrently. Specializations include (1) reduction of the five sepals to four by fusion in Petalostylis and Labichea; (2) reduction of petal number to one in Dialium; (3) reduction of stamen number to two in Labichea and Dialium, and reduction of functional stamens to three in Petalostylis; and (4) an elaborate, late-developing style in Petalostylis. Floral asymmetry, another specialization, characterizes Labichea, expressed by dissimilar stamens, while the other genera have zygomorphic flowers. Floral ontogenies are compared with other taxa of Cassieae.

  1. Multivariate innovative approaches to the treatment of the emission of LIBS plasmas. Application to chemical online analysis in a nuclear environment

    International Nuclear Information System (INIS)

    El-Rakwe, Maria

    2016-01-01

    Online and in situ analysis is now a strategic development for analytical chemistry. This is especially true in the nuclear field for which the security constraints related to the radioactivity of samples, and the need to minimize waste from analyzes argue for remote measurement techniques without sampling or sample preparation. Laser-Induced Breakdown Spectroscopy (LIBS) technique for elemental analysis of materials based on laser ablation and the optical emission spectroscopy, has these qualities. It is a technique of choice for online analysis. However, processes involved in LIBS, namely laser ablation, atomization, plasma formation and emission, are quite complex and difficult to control because the underlying physical phenomena are coupled and nonlinear. In addition, the analytical performance of the LIBS technique depends strongly on the choice of experimental conditions. Finally, an online analysis system should be as robust as possible face to uncontrolled variations in measurement conditions. The objective of this thesis is to improve control and performance of quantitative analysis by LIBS using multivariate methods capable of handling multi-dimensionality, nonlinearity and the coupling between parameters and data. For this, the work is divided into two parts. First the optimization is carried out using a central composite design to model the relationship between the experimental parameters of laser ablation (pulse energy and beam focusing parameters) and signal detection (delay time) to the physical characteristics of plasma (ablated mass, temperature) and the analytical performance (intensity and repeatability of the signal). The optimization parameters that results is then interpreted as the best compromise for the quantitative analysis between efficiency of laser ablation and plasma heating. Secondly, a multivariate methodology based on MCR-ALS, ICA and PLS techniques, was developed to quantify certain elements in different metallic matrices

  2. Evolution in the block: common elements of 5S rDNA organization and evolutionary patterns in distant fish genera.

    Science.gov (United States)

    Campo, Daniel; García-Vázquez, Eva

    2012-01-01

    The 5S rDNA is organized in the genome as tandemly repeated copies of a structural unit composed of a coding sequence plus a nontranscribed spacer (NTS). The coding region is highly conserved in the evolution, whereas the NTS vary in both length and sequence. It has been proposed that 5S rRNA genes are members of a gene family that have arisen through concerted evolution. In this study, we describe the molecular organization and evolution of the 5S rDNA in the genera Lepidorhombus and Scophthalmus (Scophthalmidae) and compared it with already known 5S rDNA of the very different genera Merluccius (Merluccidae) and Salmo (Salmoninae), to identify common structural elements or patterns for understanding 5S rDNA evolution in fish. High intra- and interspecific diversity within the 5S rDNA family in all the genera can be explained by a combination of duplications, deletions, and transposition events. Sequence blocks with high similarity in all the 5S rDNA members across species were identified for the four studied genera, with evidences of intense gene conversion within noncoding regions. We propose a model to explain the evolution of the 5S rDNA, in which the evolutionary units are blocks of nucleotides rather than the entire sequences or single nucleotides. This model implies a "two-speed" evolution: slow within blocks (homogenized by recombination) and fast within the gene family (diversified by duplications and deletions).

  3. Chemical releases of social behavior, II. source and specificity of the odor trail substances in four attine genera. (Hymenoptera: Formicidae)

    Science.gov (United States)

    Murray S. Blum; John C. Moser; A.D. Cordero

    1964-01-01

    The higher members of the tribe Attini characteristically lay persistent and extensive odor trails especially in many neotropical areas. Thus, in Acromyrmex and Atta, long columns of foraging workers are frequently present on the odor trails but in the less specialized attine genera, workers may forage either in files or singly. Weber (1958...

  4. PHYLOGENETIC RELATIONSHIP OF THE RED TIDE DINOFLAGELLATE GYMNODINIUM BREVE TO OTHER MEMBERS OF THE GENERA GYMNODINIUM AND GYRODINIUM

    Science.gov (United States)

    Phylogenetic relationships between the red-tide dinoflagellate Gymnodinium breve and other members of the genera Gymnodinium and Gyrodinium have not been studied at the molecular level. G. breve is most noted for its production of brevetoxin, which has been linked to extensive f...

  5. A revision of the genera Salpa Forskål, 1775, Pegea Savigny, 1816, and Ritteriella Metcalf, 1919 (Tunicata, Thaliacea)

    NARCIS (Netherlands)

    Soest, van R.W.M.

    1974-01-01

    Based on material from all oceans the Salp genera Salpa, Pegea and Ritteriella are revised. Particularly the study of the number of muscle fibres has shown that Salpa maxima var. tuberculata, the subspecies Pegea confoederala bicaudata and the generally synonymized species Ritteriella retracta are

  6. Redefinition of Zehneria and four new related genera (Cucurbitaceae), with an enumeration of the Australasian and Pacific species

    NARCIS (Netherlands)

    Wilde, de W.J.J.O.; Duyfjes, B.E.E.

    2006-01-01

    The genus Zehneria Endl. is split into 5 genera, of which 4 are new: Indomelothria, Neoachmandra, Scopella, and Urceodiscus. Apart from several new combinations and taxa of subspecific rank, the following species are described as new: I. chlorocarpa, N. backeri, N. lancifolia, N. macrantha, N.

  7. Eucalyptus microfungi known from culture. 2. Alysidiella, Fusculina and Phlogicylindrium genera nova, with notes on some other poorly known taxa

    NARCIS (Netherlands)

    Summerell, B.A.; Groenewald, J.Z.; Carnegie, A.J.; Summerbell, R.C.; Crous, P.W.

    2006-01-01

    Although numerous microfungi have been described from Eucalyptus in recent years, this plant genus remains a rich substrate colonized by numerous undescribed species. In the present study several species and genera of ascomycetes were collected from symptomatic leaves or from leaf litter of this

  8. Calibration of the Fluorine, Chlorine and Hydrogen Content of Apatites With the ChemCam LIBS Instrument

    Science.gov (United States)

    Meslin, P.-Y.; Cicutto, L.; Forni, O.; Drouet, C.; Rapin, W.; Nachon, M.; Cousin, A.; Blank, J. G.; McCubbin, F. M.; Gasnault, O.; hide

    2016-01-01

    Determining the composition of apatites is important to understand the behavior of volatiles during planetary differentiation. Apatite is an ubiquitous magmatic mineral in the SNC meteorites. It is a significant reservoir of halogens in these meteorites and has been used to estimate the halogen budget of Mars. Apatites have been identified in sandstones and pebbles at Gale crater by ChemCam, a Laser-Induced Breakdown Spectroscometer (LIBS) instrument onboard the Curiosity rover. Their presence was inferred from correlations between calcium, fluorine (using the CaF molecular band centered near 603 nm, whose detection limit is much lower that atomic or ionic lines and, in some cases, phosphorus (whose detection limit is much larger). An initial quantification of fluorine, based on fluorite (CaF2)/basalt mixtures and obtained at the LANL laboratory, indicated that the excess of F/Ca (compared to the stoichiometry of pure fluorapatites) found on Mars in some cases could be explained by the presence of fluorite. Chlorine was not detected in these targets, at least above a detection limit of 0.6 wt% estimated from. Fluorapatite was later also detected by X-ray diffraction (with CheMin) at a level of approx.1wt% in the Windjana drill sample (Kimberley area), and several points analyzed by ChemCam in this area also revealed a correlation between Ca and F. The in situ detection of F-rich, Cl-poor apatites contrasts with the Cl-rich, F-poor compositions of apatites found in basaltic shergottites and in gabbroic clasts from the martian meteorite NWA 7034, which were also found to be more Cl-rich than apatites from basalts on Earth, the Moon, or Vesta. The in situ observations could call into question one of the few possible explanations brought forward to explain the SNC results, namely that Mars may be highly depleted in fluorine. The purpose of the present study is to refine the calibration of the F, Cl, OH and P signals measured by the ChemCam LIBS instrument, initiated

  9. Accurate quantitative CF-LIBS analysis of both major and minor elements in alloys via iterative correction of plasma temperature and spectral intensity

    Science.gov (United States)

    Shuxia, ZHAO; Lei, ZHANG; Jiajia, HOU; Yang, ZHAO; Wangbao, YIN; Weiguang, MA; Lei, DONG; Liantuan, XIAO; Suotang, JIA

    2018-03-01

    The chemical composition of alloys directly determines their mechanical behaviors and application fields. Accurate and rapid analysis of both major and minor elements in alloys plays a key role in metallurgy quality control and material classification processes. A quantitative calibration-free laser-induced breakdown spectroscopy (CF-LIBS) analysis method, which carries out combined correction of plasma temperature and spectral intensity by using a second-order iterative algorithm and two boundary standard samples, is proposed to realize accurate composition measurements. Experimental results show that, compared to conventional CF-LIBS analysis, the relative errors for major elements Cu and Zn and minor element Pb in the copper-lead alloys has been reduced from 12%, 26% and 32% to 1.8%, 2.7% and 13.4%, respectively. The measurement accuracy for all elements has been improved substantially.

  10. Investigation of the differentiation of ex vivo nerve and fat tissues using laser-induced breakdown spectroscopy (LIBS): Prospects for tissue-specific laser surgery.

    Science.gov (United States)

    Mehari, Fanuel; Rohde, Maximillian; Kanawade, Rajesh; Knipfer, Christian; Adler, Werner; Klämpfl, Florian; Stelzle, Florian; Schmidt, Michael

    2016-10-01

    In the present study, the elemental compositions of fat and nerve tissue during their plasma mediated laser ablation are studied in the context of tissue differentiation for laser surgery applications by using Laser-Induced Breakdown Spectroscopy (LIBS). Tissue samples of porcine fat and nerve were prepared as ex vivo experimental objects. Plasma mediated laser ablation is performed using an Nd : YAG laser in open air and under normal stray light conditions. The performed measurements suggest that the two tissue types show a high similarity in terms of qualitative elemental composition while at the same time revealing a distinct difference in the concentration of the constituent elements. Different analysis approaches are evaluated and discussed to optimize the tissue-differentiation performance of the LIBS approach. Plasma mediated laser tissue ablation. © 2016 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

  11. What Technology Skills Do Developers Need? A Text Analysis of Job Listings in Library and Information Science (LIS from Jobs.code4lib.org

    Directory of Open Access Journals (Sweden)

    Monica Maceli

    2015-09-01

    Full Text Available Technology plays an indisputably vital role in library and information science (LIS work; this rapidly moving landscape can create challenges for practitioners and educators seeking to keep pace with such change.  In pursuit of building our understanding of currently sought technology competencies in developer-oriented positions within LIS, this paper reports the results of a text analysis of a large collection of job listings culled from the Code4lib jobs website.  Beginning over a decade ago as a popular mailing list covering the intersection of technology and library work, the Code4lib organization's current offerings include a website that collects and organizes LIS-related technology job listings.  The results of the text analysis of this dataset suggest the currently vital technology skills and concepts that existing and aspiring practitioners may target in their continuing education as developers.

  12. Seasonal water stress tolerance and habitat associations within four neotropical tree genera.

    Science.gov (United States)

    Baraloto, Christopher; Morneau, François; Bonal, Damien; Blanc, Lilian; Ferry, Bruno

    2007-02-01

    provides an explanation for the regional coexistence of these species pairs. We suggest that specialization to seasonally flooded habitats may explain patterns of adaptive radiation in many tropical tree genera and thereby provide a substantial contribution to regional tree diversity.

  13. Revisions of the Afrotropical genera of Argidae and species of Pampsilota Konow, 1899 (Hymenoptera, Tenthredinoidea

    Directory of Open Access Journals (Sweden)

    Andrew D. Liston

    2017-01-01

    Full Text Available The Afrotropical fauna contains five genera of Argidae. These are keyed. New subjective synonyms, followed by the valid name in brackets, are Calarge Enslin, 1911 [Arge Schrank, 1802], Calarge africana Enslin, 1911 [Arge congrua Konow, 1907], Clyparge Pasteels, 1963 [Scobina Lepeletier & Serville, 1828], Clyparge terminalis Pasteels, 1963 [Scobina poecila (Klug, 1834], and Sterictophora [sic] afra Pasteels, 1963 [Sphacophilus afer comb. n., species inquirenda near S. monjarasi Smith & Morales-Reyes, 2015]. The type material of both C. terminalis and S. afra was probably collected in the New World, but labelled with the wrong locality “Kamerun”. An introduction of both species to Africa, not followed by long-term establishment, seems less likely. The removal of these taxa from the faunal list of the region is recommended. The nine known Afrotropical species of Pampsilota are revised, and an illustrated dichotomous identification key presented, with distribution maps for all species. Four species are here described as new to science: P. dahomeyanus Goergen, Koch & Liston, sp. n., P. nigeriae Liston & Koch, sp. n., P. tsavoensis Liston & Koch, sp. n., and P. zebra Liston & Koch, sp. n. Lectotypes are designated for Pampsilota afer Konow, 1899, and Cipdele africana Mocsáry, 1909. The immature stages and host plant of only one species are known: P. dahomeyanus on Lannea nigritana (Anacardiaceae. Its larval morphology strongly resembles that of European and North American species of Arge. We provisionally retain Pampsilota as a valid genus, although it could justifiably be treated as comprising merely a species group, or groups, within Arge.

  14. Sensitivity of calcification to thermal stress varies among genera of massive reef-building corals.

    Directory of Open Access Journals (Sweden)

    Juan P Carricart-Ganivet

    Full Text Available Reductions in calcification in reef-building corals occur when thermal conditions are suboptimal, but it is unclear how they vary between genera in response to the same thermal stress event. Using densitometry techniques, we investigate reductions in the calcification rate of massive Porites spp. from the Great Barrier Reef (GBR, and P. astreoides, Montastraea faveolata, and M. franksi from the Mesoamerican Barrier Reef (MBR, and correlate them to thermal stress associated with ocean warming. Results show that Porites spp. are more sensitive to increasing temperature than Montastraea, with calcification rates decreasing by 0.40 g cm(-2 year(-1 in Porites spp. and 0.12 g cm(-2 year(-1 in Montastraea spp. for each 1°C increase. Under similar warming trends, the predicted calcification rates at 2100 are close to zero in Porites spp. and reduced by 40% in Montastraea spp. However, these predictions do not account for ocean acidification. Although yearly mean aragonite saturation (Ω(ar at MBR sites has recently decreased, only P. astreoides at Chinchorro showed a reduction in calcification. In corals at the other sites calcification did not change, indicating there was no widespread effect of Ω(ar changes on coral calcification rate in the MBR. Even in the absence of ocean acidification, differential reductions in calcification between Porites spp. and Montastraea spp. associated with warming might be expected to have significant ecological repercussions. For instance, Porites spp. invest increased calcification in extension, and under warming scenarios it may reduce their ability to compete for space. As a consequence, shifts in taxonomic composition would be expected in Indo-Pacific reefs with uncertain repercussions for biodiversity. By contrast, Montastraea spp. use their increased calcification resources to construct denser skeletons. Reductions in calcification would therefore make them more susceptible to both physical and biological

  15. A set of primers for analyzing chloroplast DNA diversity in Citrus and related genera.

    Science.gov (United States)

    Cheng, Yunjiang; de Vicente, M Carmen; Meng, Haijun; Guo, Wenwu; Tao, Nengguo; Deng, Xiuxin

    2005-06-01

    Chloroplast simple sequence repeat (cpSSR) markers in Citrus were developed and used to analyze chloroplast diversity of Citrus and closely related genera. Fourteen cpSSR primer pairs from the chloroplast genomes of tobacco (Nicotiana tabacum L.) and Arabidopsis were found useful for analyzing the Citrus chloroplast genome (cpDNA) and recoded with the prefix SPCC (SSR Primers for Citrus Chloroplast). Eleven of the 14 primer pairs revealed some degree of polymorphism among 34 genotypes of Citrus, Fortunella, Poncirus and some of their hybrids, with polymorphism information content (PIC) values ranging from 0.057 to 0.732, and 18 haplotypes were identified. The cpSSR data were analyzed with NTSYS-pc software, and the genetic relationships suggested by the unweighted pair group method based on arithmetic means (UPGMA) dendrogram were congruent with previous taxonomic investigations: the results showed that all samples fell into seven major clusters, i.e., Citrus medica L., Poncirus, Fortunella, C. ichangensis Blanco, C. reticulata Swingle, C. aurantifolia (Christm.) Swingle and C. grandis (L.) Osbeck. The results of previous studies combined with our cpSSR analyses revealed that: (1) Calamondin (C. madurensis Swingle) is the result of hybridization between kumquat (Fortunella) and mandarin (C. reticulata), where kumquat acted as the female parent; (2) Ichang papeda (C. ichangensis) has a unique taxonomic status; and (3) although Bendiguangju mandarin (C. reticulata) and Satsuma mandarin (C. reticulata) are similar in fruit shape and leaf morphology, they have different maternal parents. Bendiguangju mandarin has the same cytoplasm as sweet orange (C. sinensis), whereas Satsuma mandarin has the cytoplasm of C. reticulata. Seventeen PCR products from SPCC1 and 21 from SPCC11 were cloned and sequenced. The results revealed that mononucleotide repeats as well as insertions and deletions of small segments of DNA were associated with SPCC1 polymorphism, whereas polymorphism

  16. EFFECTS OF THE NICOTINIC RECEPTOR ANTAGONIST MECAMYLAMINE ON AD-LIB SMOKING BEHAVIOR, TOPOGRAPHY, AND NICOTINE LEVELS IN SMOKERS WITH AND WITHOUT SCHIZOPHRENIA: A PRELIMINARY STUDY

    OpenAIRE

    McKee, Sherry A.; Weinberger, Andrea H.; Harrison, Emily L. R.; Coppola, Sabrina; George, Tony P.

    2009-01-01

    Individuals with schizophrenia have higher plasma nicotine levels in comparison to non-psychiatric smokers, even when differences in smoking are equated. This difference may be related to how intensely cigarettes are smoked but this has not been well-studied. Mecamylamine (MEC), a non-competitive nicotinic acetylcholine receptor (nAChR) antagonist, which has been shown to increase ad-lib smoking and to affect smoking topography, was used in the current study as a pharmacological probe to incr...

  17. Enhancement of laser-induced breakdown spectroscopy (LIBS) Detection limit using a low-pressure and short-pulse laser-induced plasma process.

    Science.gov (United States)

    Wang, Zhen Zhen; Deguchi, Yoshihiro; Kuwahara, Masakazu; Yan, Jun Jie; Liu, Ji Ping

    2013-11-01

    Laser-induced breakdown spectroscopy (LIBS) technology is an appealing technique compared with many other types of elemental analysis because of the fast response, high sensitivity, real-time, and noncontact features. One of the challenging targets of LIBS is the enhancement of the detection limit. In this study, the detection limit of gas-phase LIBS analysis has been improved by controlling the pressure and laser pulse width. In order to verify this method, low-pressure gas plasma was induced using nanosecond and picosecond lasers. The method was applied to the detection of Hg. The emission intensity ratio of the Hg atom to NO (IHg/INO) was analyzed to evaluate the LIBS detection limit because the NO emission (interference signal) was formed during the plasma generation and cooling process of N2 and O2 in the air. It was demonstrated that the enhancement of IHg/INO arose by decreasing the pressure to a few kilopascals, and the IHg/INO of the picosecond breakdown was always much higher than that of the nanosecond breakdown at low buffer gas pressure. Enhancement of IHg/INO increased more than 10 times at 700 Pa using picosecond laser with 35 ps pulse width. The detection limit was enhanced to 0.03 ppm (parts per million). We also saw that the spectra from the center and edge parts of plasma showed different features. Comparing the central spectra with the edge spectra, IHg/INO of the edge spectra was higher than that of the central spectra using the picosecond laser breakdown process.

  18. Acceptance of shared decision making with reference to an electronic library of decision aids (arriba-lib) and its association to decision making in patients: an evaluation study.

    Science.gov (United States)

    Hirsch, Oliver; Keller, Heidemarie; Krones, Tanja; Donner-Banzhoff, Norbert

    2011-07-07

    Decision aids based on the philosophy of shared decision making are designed to help patients make informed choices among diagnostic or treatment options by delivering evidence-based information on options and outcomes. A patient decision aid can be regarded as a complex intervention because it consists of several presumably relevant components. Decision aids have rarely been field tested to assess patients' and physicians' attitudes towards them. It is also unclear what effect decision aids have on the adherence to chosen options. The electronic library of decision aids (arriba-lib) to be used within the clinical encounter has a modular structure and contains evidence-based decision aids for the following topics: cardiovascular prevention, atrial fibrillation, coronary heart disease, oral antidiabetics, conventional and intensified insulin therapy, and unipolar depression. We conducted an evaluation study in which 29 primary care physicians included 192 patients. After the consultation, patients filled in questionnaires and were interviewed via telephone two months later. We used generalised estimation equations to measure associations within patient variables and traditional crosstab analyses. Patients were highly satisfied with arriba-lib and the process of shared decision making. Two-thirds of patients reached in the telephone interview wanted to be counselled again with arriba-lib. There was a high congruence between preferred and perceived decision making. Of those patients reached in the telephone interview, 80.7% said that they implemented the decision, independent of gender and education. Elderly patients were more likely to say that they implemented the decision. Shared decision making with our multi-modular electronic library of decision aids (arriba-lib) was accepted by a high number of patients. It has positive associations to general aspects of decision making in patients. It can be used for patient groups with a wide range of individual

  19. Short Communication on “Direct compositional quantification of (U-Th)O{sub 2} - MOX nuclear fuel using ns-UV-LIBS and chemometric regression models”

    Energy Technology Data Exchange (ETDEWEB)

    Singh, Manjeet [Fuel Chemistry Division, Bhabha Atomic Research Centre, Mumbai 400 085 (India); Sarkar, Arnab, E-mail: arnab@barc.gov.in [Fuel Chemistry Division, Bhabha Atomic Research Centre, Mumbai 400 085 (India); Mao, Xianglei; Russo, Richard E. [Lawrence Berkeley National Laboratory, University of California, Berkeley, CA 94720 (United States)

    2017-02-15

    The determination of uranium with composition varying from 0% to 35 wt% in (Th-U)O{sub 2} mixed oxide fuel using laser induced breakdown spectroscopy (LIBS) utilizing partial least square regression (PLSR) has been demonstrated. Good agreement between expected and experiment results using 266 nm, 532 nm and 1064 nm was shown. The analytical results at 266 nm of 2–3% precision and ∼1% accuracy (bias) satisfy the acceptance criteria range for chemical analysis in the nuclear industry.

  20. Direct spectral analysis of tea samples using 266 nm UV pulsed laser-induced breakdown spectroscopy and cross validation of LIBS results with ICP-MS.

    Science.gov (United States)

    Gondal, M A; Habibullah, Y B; Baig, Umair; Oloore, L E

    2016-05-15

    Tea is one of the most common and popular beverages spanning vast array of cultures all over the world. The main nutritional benefits of drinking tea are its anti-oxidant properties, presumed protection against certain cancers, inhibition of inflammation and possible protective effects against diabetes. Laser induced breakdown spectrometer (LIBS) was assembled as a powerful tool for qualitative and quantitative analysis of various brands of tea samples using 266 nm pulsed UV laser. LIBS spectra for six brands of tea samples in the wavelength range of 200-900 nm was recorded and all elements present in our tea samples were identified. The major toxic elements detected in several brands of tea samples were bromine, chromium and minerals like iron, calcium, potassium and silicon. The spectral assignment was conducted prior to the determination of concentration of each element. For quantitative analysis, calibration curves were drawn for each element using standard samples prepared in known concentration in the tea matrix. The plasma parameters (electron temperature and electron density) were also determined prior to the tea samples spectroscopic analysis. The concentration of iron, chromium, potassium, bromine, copper, silicon and calcium detected in all tea samples was between 378-656, 96-124, 1421-6785, 99-1476, 17-36, 2-11 and 92-130 mg L(-1) respectively. The limits of detection estimated for Fe, Cr, K, Br, Cu, Si, Ca in tea samples were 22, 12, 14, 11, 6, 1 and 12 mg L(-1) respectively. To further confirm the accuracy of our LIBS results, we determined the concentration of each element present in tea samples by using standard analytical technique like ICP-MS. The concentrations detected with our LIBS system are in excellent agreement with ICP-MS results. The system assembled for spectral analysis in this work could be highly applicable for testing the quality and purity of food and also pharmaceuticals products. Copyright © 2016 Elsevier B.V. All rights reserved.