Calculation of neutron flux and reactivity by perturbation theory at high order

International Nuclear Information System (INIS)

Silva, W.L.P. da; Silva, F.C. da; Thome Filho, Z.D.

1982-01-01

A high order pertubation theory is studied, independent of time, applied to integral parameter calculation of a nuclear reactor. A pertubative formulation, based on flux difference technique, which gives directy the reactivity and neutron flux up to the aproximation order required, is presented. As an application of the method, global pertubations represented by fuel temperature variations, are used. Tests were done aiming to verify the relevancy of the approximation order for several intensities of the pertubations considered. (E.G.) [pt

Reconstruction of recycling flux from synthetic camera images, evaluated for the Wendelstein 7-X startup limiter

Science.gov (United States)

Frerichs, H.; Effenberg, F.; Feng, Y.; Schmitz, O.; Stephey, L.; Reiter, D.; Börner, P.; The W7-X Team

2017-12-01

The interpretation of spectroscopic measurements in the edge region of high-temperature plasmas can be guided by modeling with the EMC3-EIRENE code. A versatile synthetic diagnostic module, initially developed for the generation of synthetic camera images, has been extended for the evaluation of the inverse problem in which the observable photon flux is related back to the originating particle flux (recycling). An application of this synthetic diagnostic to the startup phase (inboard) limiter in Wendelstein 7-X (W7-X) is presented, and reconstruction of recycling from synthetic observation of \\renewcommand{\

First-order chemistry in the surface-flux layer

DEFF Research Database (Denmark)

Kristensen, L.; Andersen, C.E.; Ejsing Jørgensen, Hans

1997-01-01

of a characteristic turbulent time scale and the scalar mean lifetime. We show that if we use only first-order closure and neglect the effect of the Damkohler ratio on the turbulent diffusivity we obtain another analytic solution for the profiles of the flux and the mean concentration which, from an experimental...

Statistical image reconstruction for transmission tomography using relaxed ordered subset algorithms

International Nuclear Information System (INIS)

Kole, J S

2005-01-01

Statistical reconstruction methods offer possibilities for improving image quality as compared to analytical methods, but current reconstruction times prohibit routine clinical applications in x-ray computed tomography (CT). To reduce reconstruction times, we have applied (under) relaxation to ordered subset algorithms. This enables us to use subsets consisting of only single projection angle, effectively increasing the number of image updates within an entire iteration. A second advantage of applying relaxation is that it can help improve convergence by removing the limit cycle behaviour of ordered subset algorithms, which normally do not converge to an optimal solution but rather a suboptimal limit cycle consisting of as many points as there are subsets. Relaxation suppresses the limit cycle behaviour by decreasing the stepsize for approaching the solution. A simulation study for a 2D mathematical phantom and three different ordered subset algorithms shows that all three algorithms benefit from relaxation: equal noise-to-resolution trade-off can be achieved using fewer iterations than the conventional algorithms, while a lower minimal normalized mean square error (NMSE) clearly indicates a better convergence. Two different schemes for setting the relaxation parameter are studied, and both schemes yield approximately the same minimal NMSE

Higher-order relationship between eigen-value separation and static flux tilts

International Nuclear Information System (INIS)

Beckner, W.D.

1975-01-01

Spatial kinetics phenomena in nuclear reactors, such as xenon-induced spatial flux oscillations, are currently being analyzed using the higher harmonic solutions to the static reactor balance equation. An important parameter in such an analysis is a global quantity called eigenvalue separation. It is desirable to be able to experimentally measure this parameter in power reactors in order to confirm design calculations. Since spatial distortions in the flux shape depend on the eigenvalue separation of the reactor, an attempt has been made previously to use this fact as a means of measuring the parameter. It was postulated that an induced flux distortion or ''static flux tilt'' could be measured and theoretically related to eigenvalue separation. Unfortunately, the behavior of experimental data did not exactly agree with theoretical predictions, and values of the parameter found using the original static flux tilt technique were consistently low. The theory has been re-evaluated here and the previously observed discrepancy eliminated. Techniques have been also developed to allow for more accurate interpretation of experimental data. In order to make the method applicable to real systems, the theory has been extended to two spatial dimensions; extension to three dimensions follows directly. Possible trouble areas have been investigated, and experimental procedures for use of the technique to measure the eigenvalue separation in power reactors are presented

Reconstruction and flux analysis of coupling between metabolic pathways of astrocytes and neurons: application to cerebral hypoxia

Directory of Open Access Journals (Sweden)

Akιn Ata

2007-12-01

Full Text Available Abstract Background It is a daunting task to identify all the metabolic pathways of brain energy metabolism and develop a dynamic simulation environment that will cover a time scale ranging from seconds to hours. To simplify this task and make it more practicable, we undertook stoichiometric modeling of brain energy metabolism with the major aim of including the main interacting pathways in and between astrocytes and neurons. Model The constructed model includes central metabolism (glycolysis, pentose phosphate pathway, TCA cycle, lipid metabolism, reactive oxygen species (ROS detoxification, amino acid metabolism (synthesis and catabolism, the well-known glutamate-glutamine cycle, other coupling reactions between astrocytes and neurons, and neurotransmitter metabolism. This is, to our knowledge, the most comprehensive attempt at stoichiometric modeling of brain metabolism to date in terms of its coverage of a wide range of metabolic pathways. We then attempted to model the basal physiological behaviour and hypoxic behaviour of the brain cells where astrocytes and neurons are tightly coupled. Results The reconstructed stoichiometric reaction model included 217 reactions (184 internal, 33 exchange and 216 metabolites (183 internal, 33 external distributed in and between astrocytes and neurons. Flux balance analysis (FBA techniques were applied to the reconstructed model to elucidate the underlying cellular principles of neuron-astrocyte coupling. Simulation of resting conditions under the constraints of maximization of glutamate/glutamine/GABA cycle fluxes between the two cell types with subsequent minimization of Euclidean norm of fluxes resulted in a flux distribution in accordance with literature-based findings. As a further validation of our model, the effect of oxygen deprivation (hypoxia on fluxes was simulated using an FBA-derivative approach, known as minimization of metabolic adjustment (MOMA. The results show the power of the

Reconstructing the temporal ordering of biological samples using microarray data.

Science.gov (United States)

Magwene, Paul M; Lizardi, Paul; Kim, Junhyong

2003-05-01

Accurate time series for biological processes are difficult to estimate due to problems of synchronization, temporal sampling and rate heterogeneity. Methods are needed that can utilize multi-dimensional data, such as those resulting from DNA microarray experiments, in order to reconstruct time series from unordered or poorly ordered sets of observations. We present a set of algorithms for estimating temporal orderings from unordered sets of sample elements. The techniques we describe are based on modifications of a minimum-spanning tree calculated from a weighted, undirected graph. We demonstrate the efficacy of our approach by applying these techniques to an artificial data set as well as several gene expression data sets derived from DNA microarray experiments. In addition to estimating orderings, the techniques we describe also provide useful heuristics for assessing relevant properties of sample datasets such as noise and sampling intensity, and we show how a data structure called a PQ-tree can be used to represent uncertainty in a reconstructed ordering. Academic implementations of the ordering algorithms are available as source code (in the programming language Python) on our web site, along with documentation on their use. The artificial 'jelly roll' data set upon which the algorithm was tested is also available from this web site. The publicly available gene expression data may be found at http://genome-www.stanford.edu/cellcycle/ and http://caulobacter.stanford.edu/CellCycle/.

An efficient and accurate two-stage fourth-order gas-kinetic scheme for the Euler and Navier-Stokes equations

Science.gov (United States)

Pan, Liang; Xu, Kun; Li, Qibing; Li, Jiequan

2016-12-01

For computational fluid dynamics (CFD), the generalized Riemann problem (GRP) solver and the second-order gas-kinetic scheme (GKS) provide a time-accurate flux function starting from a discontinuous piecewise linear flow distributions around a cell interface. With the adoption of time derivative of the flux function, a two-stage Lax-Wendroff-type (L-W for short) time stepping method has been recently proposed in the design of a fourth-order time accurate method for inviscid flow [21]. In this paper, based on the same time-stepping method and the second-order GKS flux function [42], a fourth-order gas-kinetic scheme is constructed for the Euler and Navier-Stokes (NS) equations. In comparison with the formal one-stage time-stepping third-order gas-kinetic solver [24], the current fourth-order method not only reduces the complexity of the flux function, but also improves the accuracy of the scheme. In terms of the computational cost, a two-dimensional third-order GKS flux function takes about six times of the computational time of a second-order GKS flux function. However, a fifth-order WENO reconstruction may take more than ten times of the computational cost of a second-order GKS flux function. Therefore, it is fully legitimate to develop a two-stage fourth order time accurate method (two reconstruction) instead of standard four stage fourth-order Runge-Kutta method (four reconstruction). Most importantly, the robustness of the fourth-order GKS is as good as the second-order one. In the current computational fluid dynamics (CFD) research, it is still a difficult problem to extend the higher-order Euler solver to the NS one due to the change of governing equations from hyperbolic to parabolic type and the initial interface discontinuity. This problem remains distinctively for the hypersonic viscous and heat conducting flow. The GKS is based on the kinetic equation with the hyperbolic transport and the relaxation source term. The time-dependent GKS flux function

A family of high-order gas-kinetic schemes and its comparison with Riemann solver based high-order methods

Science.gov (United States)

Ji, Xing; Zhao, Fengxiang; Shyy, Wei; Xu, Kun

2018-03-01

Most high order computational fluid dynamics (CFD) methods for compressible flows are based on Riemann solver for the flux evaluation and Runge-Kutta (RK) time stepping technique for temporal accuracy. The advantage of this kind of space-time separation approach is the easy implementation and stability enhancement by introducing more middle stages. However, the nth-order time accuracy needs no less than n stages for the RK method, which can be very time and memory consuming due to the reconstruction at each stage for a high order method. On the other hand, the multi-stage multi-derivative (MSMD) method can be used to achieve the same order of time accuracy using less middle stages with the use of the time derivatives of the flux function. For traditional Riemann solver based CFD methods, the lack of time derivatives in the flux function prevents its direct implementation of the MSMD method. However, the gas kinetic scheme (GKS) provides such a time accurate evolution model. By combining the second-order or third-order GKS flux functions with the MSMD technique, a family of high order gas kinetic methods can be constructed. As an extension of the previous 2-stage 4th-order GKS, the 5th-order schemes with 2 and 3 stages will be developed in this paper. Based on the same 5th-order WENO reconstruction, the performance of gas kinetic schemes from the 2nd- to the 5th-order time accurate methods will be evaluated. The results show that the 5th-order scheme can achieve the theoretical order of accuracy for the Euler equations, and present accurate Navier-Stokes solutions as well due to the coupling of inviscid and viscous terms in the GKS formulation. In comparison with Riemann solver based 5th-order RK method, the high order GKS has advantages in terms of efficiency, accuracy, and robustness, for all test cases. The 4th- and 5th-order GKS have the same robustness as the 2nd-order scheme for the capturing of discontinuous solutions. The current high order MSMD GKS is a

Fermi-surface reconstruction by stripe order in cuprate superconductors

Science.gov (United States)

Laliberté, Francis

2012-02-01

The origin of pairing in a superconductor resides in the underlying normal state. In the cuprate high-temperature superconductor YBCO, application of a magnetic field to suppress superconductivity reveals a ground state that appears to break the translational symmetry of the lattice, pointing to some density-wave order [1,2,3]. In another cuprate, Eu-LSCO, the onset of stripe order - a modulation of spin and charge densities - at low temperature is well established [4]. By a comparative study of thermoelectric transport in the cuprates YBCO and Eu-LSCO, we show that the two materials exhibit a very similar process of Fermi-surface reconstruction as a function of temperature and doping [5,6]. This strongly suggests that Fermi-surface reconstruction is caused by stripe order in both cases, compelling evidence that stripe order is a generic tendency of hole-doped cuprates.[4pt] Work done in collaboration with J. Chang, N. Doiron-Leyraud, E. Hassinger, R. Daou, D. LeBoeuf, M. Rondeau, B. J. Ramshaw, R. Liang, D. A. Bonn, W. N. Hardy, S. Pyon, T. Takayama, H. Takagi, I. Sheikin, L. Malone, C. Proust, K. Behnia and L. Taillefer.[4pt] [1] N. Doiron-Leyraud et al., Nature 447, 565 (2007).[0pt] [2] D. LeBoeuf et al., Nature 450, 533 (2007).[0pt] [3] D. LeBoeuf et al., Phys. Rev. B 83, 054506 (2011).[0pt] [4] J. Fink et al., Phys. Rev. B 83, 092503 (2011).[0pt] [5] J. Chang et al., Phys. Rev. Lett. 104, 057005 (2010).[0pt] [6] F. Lalibert'e et al., Nat. Commun. 2, 432 (2011).

WENO schemes for balance laws with spatially varying flux

International Nuclear Information System (INIS)

Vukovic, Senka; Crnjaric-Zic, Nelida; Sopta, Luka

2004-01-01

In this paper we construct numerical schemes of high order of accuracy for hyperbolic balance law systems with spatially variable flux function and a source term of the geometrical type. We start with the original finite difference characteristicwise weighted essentially nonoscillatory (WENO) schemes and then we create new schemes by modifying the flux formulations (locally Lax-Friedrichs and Roe with entropy fix) in order to account for the spatially variable flux, and by decomposing the source term in order to obtain balance between numerical approximations of the flux gradient and of the source term. We apply so extended WENO schemes to the one-dimensional open channel flow equations and to the one-dimensional elastic wave equations. In particular, we prove that in these applications the new schemes are exactly consistent with steady-state solutions from an appropriately chosen subset. Experimentally obtained orders of accuracy of the extended and original WENO schemes are almost identical on a convergence test. Other presented test problems illustrate the improvement of the proposed schemes relative to the original WENO schemes combined with the pointwise source term evaluation. As expected, the increase in the formal order of accuracy of applied WENO reconstructions in all the tests causes visible increase in the high resolution properties of the schemes

High-Order Hyperbolic Residual-Distribution Schemes on Arbitrary Triangular Grids

Science.gov (United States)

2015-06-22

for efficient CFD calculations in high-order methods,3 because the grid adaptation almost necessarily introduces irregularity in the grid. In fact...problems. References 1P.A. Gnoffo. Multi-dimensional, inviscid flux reconstruction for simulation of hypersonic heating on tetrahedral grids. In Proc. of...Kitamura, E. Shima, Y. Nakamura, and P.L. Roe. Evaluation of euler fluxes for hypersonic heating computations. AIAA J., 48(4):763–776, 2010. 3Z.J. Wang, K

A high order compact least-squares reconstructed discontinuous Galerkin method for the steady-state compressible flows on hybrid grids

Science.gov (United States)

Cheng, Jian; Zhang, Fan; Liu, Tiegang

2018-06-01

In this paper, a class of new high order reconstructed DG (rDG) methods based on the compact least-squares (CLS) reconstruction [23,24] is developed for simulating the two dimensional steady-state compressible flows on hybrid grids. The proposed method combines the advantages of the DG discretization with the flexibility of the compact least-squares reconstruction, which exhibits its superior potential in enhancing the level of accuracy and reducing the computational cost compared to the underlying DG methods with respect to the same number of degrees of freedom. To be specific, a third-order compact least-squares rDG(p1p2) method and a fourth-order compact least-squares rDG(p2p3) method are developed and investigated in this work. In this compact least-squares rDG method, the low order degrees of freedom are evolved through the underlying DG(p1) method and DG(p2) method, respectively, while the high order degrees of freedom are reconstructed through the compact least-squares reconstruction, in which the constitutive relations are built by requiring the reconstructed polynomial and its spatial derivatives on the target cell to conserve the cell averages and the corresponding spatial derivatives on the face-neighboring cells. The large sparse linear system resulted by the compact least-squares reconstruction can be solved relatively efficient when it is coupled with the temporal discretization in the steady-state simulations. A number of test cases are presented to assess the performance of the high order compact least-squares rDG methods, which demonstrates their potential to be an alternative approach for the high order numerical simulations of steady-state compressible flows.

A model for heliospheric flux-ropes

Science.gov (United States)

Nieves-Chinchilla, T.; Linton, M.; Vourlidas, A.; Hidalgo, M. A. U.

2017-12-01

This work is presents an analytical flux-rope model, which explores different levels of complexity starting from a circular-cylindrical geometry. The framework of this series of models was established by Nieves-Chinchilla et al. 2016 with the circular-cylindrical analytical flux rope model. The model attempts to describe the magnetic flux rope topology with distorted cross-section as a possible consequence of the interaction with the solar wind. In this model, the flux rope is completely described in a non-orthogonal geometry. The Maxwell equations are solved using tensor calculus consistent with the geometry chosen, invariance along the axial direction, and with the assumption of no radial current density. The model is generalized in terms of the radial and azimuthal dependence of the poloidal current density component and axial current density component. The misalignment between current density and magnetic field is studied in detail for several example profiles of the axial and poloidal current density components. This theoretical analysis provides a map of the force distribution inside of the flux-rope. For reconstruction of the heliospheric flux-ropes, the circular-cylindrical reconstruction technique has been adapted to the new geometry and applied to in situ ICMEs with a flux-rope entrained and tested with cases with clear in situ signatures of distortion. The model adds a piece in the puzzle of the physical-analytical representation of these magnetic structures that should be evaluated with the ultimate goal of reconciling in-situ reconstructions with imaging 3D remote sensing CME reconstructions. Other effects such as axial curvature and/or expansion could be incorporated in the future to fully understand the magnetic structure.

Methods for reconstruction of the density distribution of nuclear power

International Nuclear Information System (INIS)

Pessoa, Paulo O.; Silva, Fernando C.; Martinez, Aquilino S.

2015-01-01

Highlights: • Two methods for reconstruction of the pin power distribution are presented. • The ARM method uses analytical solution of the 2D diffusion equation. • The PRM method uses polynomial solution without boundary conditions. • The maximum errors in pin power reconstruction occur in the peripheral water region. • The errors are significantly less in the inner area of the core. - Abstract: In analytical reconstruction method (ARM), the two-dimensional (2D) neutron diffusion equation is analytically solved for two energy groups (2G) and homogeneous nodes with dimensions of a fuel assembly (FA). The solution employs a 2D fourth-order expansion for the axial leakage term. The Nodal Expansion Method (NEM) provides the solution average values as the four average partial currents on the surfaces of the node, the average flux in the node and the multiplying factor of the problem. The expansion coefficients for the axial leakage are determined directly from NEM method or can be determined in the reconstruction method. A new polynomial reconstruction method (PRM) is implemented based on the 2D expansion for the axial leakage term. The ARM method use the four average currents on the surfaces of the node and four average fluxes in corners of the node as boundary conditions and the average flux in the node as a consistency condition. To determine the average fluxes in corners of the node an analytical solution is employed. This analytical solution uses the average fluxes on the surfaces of the node as boundary conditions and discontinuities in corners are incorporated. The polynomial and analytical solutions to the PRM and ARM methods, respectively, represent the homogeneous flux distributions. The detailed distributions inside a FA are estimated by product of homogeneous distribution by local heterogeneous form function. Moreover, the form functions of power are used. The results show that the methods have good accuracy when compared with reference values and

High-Order Wave Propagation Algorithms for Hyperbolic Systems

KAUST Repository

Ketcheson, David I.

2013-01-22

We present a finite volume method that is applicable to hyperbolic PDEs including spatially varying and semilinear nonconservative systems. The spatial discretization, like that of the well-known Clawpack software, is based on solving Riemann problems and calculating fluctuations (not fluxes). The implementation employs weighted essentially nonoscillatory reconstruction in space and strong stability preserving Runge--Kutta integration in time. The method can be extended to arbitrarily high order of accuracy and allows a well-balanced implementation for capturing solutions of balance laws near steady state. This well-balancing is achieved through the $f$-wave Riemann solver and a novel wave-slope WENO reconstruction procedure. The wide applicability and advantageous properties of the method are demonstrated through numerical examples, including problems in nonconservative form, problems with spatially varying fluxes, and problems involving near-equilibrium solutions of balance laws.

Scattering Correction For Image Reconstruction In Flash Radiography

Energy Technology Data Exchange (ETDEWEB)

Cao, Liangzhi; Wang, Mengqi; Wu, Hongchun; Liu, Zhouyu; Cheng, Yuxiong; Zhang, Hongbo [Xi' an Jiaotong Univ., Xi' an (China)

2013-08-15

Scattered photons cause blurring and distortions in flash radiography, reducing the accuracy of image reconstruction significantly. The effect of the scattered photons is taken into account and an iterative deduction of the scattered photons is proposed to amend the scattering effect for image restoration. In order to deduct the scattering contribution, the flux of scattered photons is estimated as the sum of two components. The single scattered component is calculated accurately together with the uncollided flux along the characteristic ray, while the multiple scattered component is evaluated using correction coefficients pre-obtained from Monte Carlo simulations.The arbitrary geometry pretreatment and ray tracing are carried out based on the customization of AutoCAD. With the above model, an Iterative Procedure for image restORation code, IPOR, is developed. Numerical results demonstrate that the IPOR code is much more accurate than the direct reconstruction solution without scattering correction and it has a very high computational efficiency.

Scattering Correction For Image Reconstruction In Flash Radiography

International Nuclear Information System (INIS)

Cao, Liangzhi; Wang, Mengqi; Wu, Hongchun; Liu, Zhouyu; Cheng, Yuxiong; Zhang, Hongbo

2013-01-01

Scattered photons cause blurring and distortions in flash radiography, reducing the accuracy of image reconstruction significantly. The effect of the scattered photons is taken into account and an iterative deduction of the scattered photons is proposed to amend the scattering effect for image restoration. In order to deduct the scattering contribution, the flux of scattered photons is estimated as the sum of two components. The single scattered component is calculated accurately together with the uncollided flux along the characteristic ray, while the multiple scattered component is evaluated using correction coefficients pre-obtained from Monte Carlo simulations.The arbitrary geometry pretreatment and ray tracing are carried out based on the customization of AutoCAD. With the above model, an Iterative Procedure for image restORation code, IPOR, is developed. Numerical results demonstrate that the IPOR code is much more accurate than the direct reconstruction solution without scattering correction and it has a very high computational efficiency

Perturbation methods for power and reactivity reconstruction

International Nuclear Information System (INIS)

Palmiotti, G.; Salvatores, M.; Estiot, J.C.; Broccoli, U.; Bruna, G.; Gomit, J.M.

1987-01-01

This paper deals with recent developments and applications in perturbation methods. Two types of methods are used. The first one is an explicit method, which allows the explicit reconstruction of a perturbed flux using a linear combination of a library of functions. In our application, these functions are the harmonics (i.e. the high order eigenfunctions of the system). The second type is based on the Generalized Perturbation Theory GPT and needs the calculation of an importance function for each integral parameter of interest. Recent developments of a particularly useful high order formulation allows to obtain satisfactory results also for very large perturbations

Two-dimensional semi-analytic nodal method for multigroup pin power reconstruction

International Nuclear Information System (INIS)

Seung Gyou, Baek; Han Gyu, Joo; Un Chul, Lee

2007-01-01

A pin power reconstruction method applicable to multigroup problems involving square fuel assemblies is presented. The method is based on a two-dimensional semi-analytic nodal solution which consists of eight exponential terms and 13 polynomial terms. The 13 polynomial terms represent the particular solution obtained under the condition of a 2-dimensional 13 term source expansion. In order to achieve better approximation of the source distribution, the least square fitting method is employed. The 8 exponential terms represent a part of the analytically obtained homogeneous solution and the 8 coefficients are determined by imposing constraints on the 4 surface average currents and 4 corner point fluxes. The surface average currents determined from a transverse-integrated nodal solution are used directly whereas the corner point fluxes are determined during the course of the reconstruction by employing an iterative scheme that would realize the corner point balance condition. The outgoing current based corner point flux determination scheme is newly introduced. The accuracy of the proposed method is demonstrated with the L336C5 benchmark problem. (authors)

Reconstructing Heat Fluxes Over Lake Erie During the Lake Effect Snow Event of November 2014

Science.gov (United States)

Fitzpatrick, L.; Fujisaki-Manome, A.; Gronewold, A.; Anderson, E. J.; Spence, C.; Chen, J.; Shao, C.; Posselt, D. J.; Wright, D. M.; Lofgren, B. M.; Schwab, D. J.

2017-12-01

The extreme North American winter storm of November 2014 triggered a record lake effect snowfall (LES) event in southwest New York. This study examined the evaporation from Lake Erie during the record lake effect snowfall event, November 17th-20th, 2014, by reconstructing heat fluxes and evaporation rates over Lake Erie using the unstructured grid, Finite-Volume Community Ocean Model (FVCOM). Nine different model runs were conducted using combinations of three different flux algorithms: the Met Flux Algorithm (COARE), a method routinely used at NOAA's Great Lakes Environmental Research Laboratory (SOLAR), and the Los Alamos Sea Ice Model (CICE); and three different meteorological forcings: the Climate Forecast System version 2 Operational Analysis (CFSv2), Interpolated observations (Interp), and the High Resolution Rapid Refresh (HRRR). A few non-FVCOM model outputs were also included in the evaporation analysis from an atmospheric reanalysis (CFSv2) and the large lake thermodynamic model (LLTM). Model-simulated water temperature and meteorological forcing data (wind direction and air temperature) were validated with buoy data at three locations in Lake Erie. The simulated sensible and latent heat fluxes were validated with the eddy covariance measurements at two offshore sites; Long Point Lighthouse in north central Lake Erie and Toledo water crib intake in western Lake Erie. The evaluation showed a significant increase in heat fluxes over three days, with the peak on the 18th of November. Snow water equivalent data from the National Snow Analyses at the National Operational Hydrologic Remote Sensing Center showed a spike in water content on the 20th of November, two days after the peak heat fluxes. The ensemble runs presented a variation in spatial pattern of evaporation, lake-wide average evaporation, and resulting cooling of the lake. Overall, the evaporation tended to be larger in deep water than shallow water near the shore. The lake-wide average evaporations

Interface reconstruction with emerging charge ordering in hexagonal manganite

Science.gov (United States)

Xu, Changsong; Han, Myung-Geun; Bao, Shanyong; Nan, Cewen; Bellaiche, Laurent

2018-01-01

Multiferroic materials, which simultaneously have multiple orderings, hold promise for use in the next generation of memory devices. We report a novel self-assembled MnO double layer forming at the interface between a multiferroic YMnO3 film and a c-Al2O3 substrate. The crystal structures and the valence states of this MnO double layer were studied by atomically resolved scanning transmission electron microscopy and spectroscopy, as well as density functional theory (DFT) calculations. A new type of charge ordering has been identified within this MnO layer, which also contributes to a polarization along the [001] direction. DFT calculations further establish the occurrence of multiple couplings between charge and lattice in this novel double layer, in addition to the polarization in nearby YMnO3 single layer. The interface reconstruction reported here creates a new playground for emergent physics, such as giant ferroelectricity and strong magnetoelectric coupling, in manganite systems. PMID:29795782

Methods for the reconstruction of large scale anisotropies of the cosmic ray flux

Energy Technology Data Exchange (ETDEWEB)

Over, Sven

2010-01-15

In cosmic ray experiments the arrival directions, among other properties, of cosmic ray particles from detected air shower events are reconstructed. The question of uniformity in the distribution of arrival directions is of large importance for models that try to explain cosmic radiation. In this thesis, methods for the reconstruction of parameters of a dipole-like flux distribution of cosmic rays from a set of recorded air shower events are studied. Different methods are presented and examined by means of detailed Monte Carlo simulations. Particular focus is put on the implications of spurious experimental effects. Modifications of existing methods and new methods are proposed. The main goal of this thesis is the development of the horizontal Rayleigh analysis method. Unlike other methods, this method is based on the analysis of local viewing directions instead of global sidereal directions. As a result, the symmetries of the experimental setup can be better utilised. The calculation of the sky coverage (exposure function) is not necessary in this analysis. The performance of the method is tested by means of further Monte Carlo simulations. The new method performs similarly good or only marginally worse than established methods in case of ideal measurement conditions. However, the simulation of certain experimental effects can cause substantial misestimations of the dipole parameters by the established methods, whereas the new method produces no systematic deviations. The invulnerability to certain effects offers additional advantages, as certain data selection cuts become dispensable. (orig.)

Coarse-mesh discretized low-order quasi-diffusion equations for subregion averaged scalar fluxes

International Nuclear Information System (INIS)

Anistratov, D. Y.

2004-01-01

In this paper we develop homogenization procedure and discretization for the low-order quasi-diffusion equations on coarse grids for core-level reactor calculations. The system of discretized equations of the proposed method is formulated in terms of the subregion averaged group scalar fluxes. The coarse-mesh solution is consistent with a given fine-mesh discretization of the transport equation in the sense that it preserves a set of average values of the fine-mesh transport scalar flux over subregions of coarse-mesh cells as well as the surface currents, and eigenvalue. The developed method generates numerical solution that mimics the large-scale behavior of the transport solution within assemblies. (authors)

Effects of language dominance on item and order memory in free recall, serial recall and order reconstruction.

Science.gov (United States)

Francis, Wendy S; Baca, Yuzeth

2014-01-01

Spanish-English bilinguals (N = 144) performed free recall, serial recall and order reconstruction tasks in both English and Spanish. Long-term memory for both item and order information was worse in the less fluent language (L2) than in the more fluent language (L1). Item scores exhibited a stronger disadvantage for the L2 in serial recall than in free recall. Relative order scores were lower in the L2 for all three tasks, but adjusted scores for free and serial recall were equivalent across languages. Performance of English-speaking monolinguals (N = 72) was comparable to bilingual performance in the L1, except that monolinguals had higher adjusted order scores in free recall. Bilingual performance patterns in the L2 were consistent with the established effects of concurrent task performance on these memory tests, suggesting that the cognitive resources required for processing words in the L2 encroach on resources needed to commit item and order information to memory. These findings are also consistent with a model in which item memory is connected to the language system, order information is processed by separate mechanisms and attention can be allocated differentially to these two systems.

Evaluation of image reconstruction methods for 123I-MIBG-SPECT. A rank-order study

International Nuclear Information System (INIS)

Soederberg, Marcus; Mattsson, Soeren; Oddstig, Jenny; Uusijaervi-Lizana, Helena; Leide-Svegborn, Sigrid; Valind, Sven; Thorsson, Ola; Garpered, Sabine; Prautzsch, Tilmann; Tischenko, Oleg

2012-01-01

Background: There is an opportunity to improve the image quality and lesion detectability in single photon emission computed tomography (SPECT) by choosing an appropriate reconstruction method and optimal parameters for the reconstruction. Purpose: To optimize the use of the Flash 3D reconstruction algorithm in terms of equivalent iteration (EI) number (number of subsets times the number of iterations) and to compare with two recently developed reconstruction algorithms ReSPECT and orthogonal polynomial expansion on disc (OPED) for application on 123 I-metaiodobenzylguanidine (MIBG)-SPECT. Material and Methods: Eleven adult patients underwent SPECT 4 h and 14 patients 24 h after injection of approximately 200 MBq 123 I-MIBG using a Siemens Symbia T6 SPECT/CT. Images were reconstructed from raw data using the Flash 3D algorithm at eight different EI numbers. The images were ranked by three experienced nuclear medicine physicians according to their overall impression of the image quality. The obtained optimal images were then compared in one further visual comparison with images reconstructed using the ReSPECT and OPED algorithms. Results: The optimal EI number for Flash 3D was determined to be 32 for acquisition 4 h and 24 h after injection. The average rank order (best first) for the different reconstructions for acquisition after 4 h was: Flash 3D 32 > ReSPECT > Flash 3D 64 > OPED, and after 24 h: Flash 3D 16 > ReSPECT > Flash 3D 32 > OPED. A fair level of inter-observer agreement concerning optimal EI number and reconstruction algorithm was obtained, which may be explained by the different individual preferences of what is appropriate image quality. Conclusion: Using Siemens Symbia T6 SPECT/CT and specified acquisition parameters, Flash 3D 32 (4 h) and Flash 3D 16 (24 h), followed by ReSPECT, were assessed to be the preferable reconstruction algorithms in visual assessment of 123 I-MIBG images

A faster ordered-subset convex algorithm for iterative reconstruction in a rotation-free micro-CT system

International Nuclear Information System (INIS)

Quan, E; Lalush, D S

2009-01-01

We present a faster iterative reconstruction algorithm based on the ordered-subset convex (OSC) algorithm for transmission CT. The OSC algorithm was modified such that it calculates the normalization term before the iterative process in order to save computational cost. The modified version requires only one backprojection per iteration as compared to two required for the original OSC. We applied the modified OSC (MOSC) algorithm to a rotation-free micro-CT system that we proposed previously, observed its performance, and compared with the OSC algorithm for 3D cone-beam reconstruction. Measurements on the reconstructed images as well as the point spread functions show that MOSC is quite similar to OSC; in noise-resolution trade-off, MOSC is comparable with OSC in a regular-noise situation and it is slightly worse than OSC in an extremely high-noise situation. The timing record shows that MOSC saves 25-30% CPU time, depending on the number of iterations used. We conclude that the MOSC algorithm is more efficient than OSC and provides comparable images.

Bayesian image reconstruction in SPECT using higher order mechanical models as priors

International Nuclear Information System (INIS)

Lee, S.J.; Gindi, G.; Rangarajan, A.

1995-01-01

While the ML-EM (maximum-likelihood-expectation maximization) algorithm for reconstruction for emission tomography is unstable due to the ill-posed nature of the problem, Bayesian reconstruction methods overcome this instability by introducing prior information, often in the form of a spatial smoothness regularizer. More elaborate forms of smoothness constraints may be used to extend the role of the prior beyond that of a stabilizer in order to capture actual spatial information about the object. Previously proposed forms of such prior distributions were based on the assumption of a piecewise constant source distribution. Here, the authors propose an extension to a piecewise linear model--the weak plate--which is more expressive than the piecewise constant model. The weak plate prior not only preserves edges but also allows for piecewise ramplike regions in the reconstruction. Indeed, for the application in SPECT, such ramplike regions are observed in ground-truth source distributions in the form of primate autoradiographs of rCBF radionuclides. To incorporate the weak plate prior in a MAP approach, the authors model the prior as a Gibbs distribution and use a GEM formulation for the optimization. They compare quantitative performance of the ML-EM algorithm, a GEM algorithm with a prior favoring piecewise constant regions, and a GEM algorithm with the weak plate prior. Pointwise and regional bias and variance of ensemble image reconstructions are used as indications of image quality. The results show that the weak plate and membrane priors exhibit improved bias and variance relative to ML-EM techniques

Is X-ray emissivity constant on magnetic flux surfaces?

International Nuclear Information System (INIS)

Granetz, R.S.; Borras, M.C.

1997-01-01

Knowledge of the elongations and shifts of internal magnetic flux surfaces can be used to determine the q profile in elongated tokamak plasmas. X-ray tomography is thought to be a reasonable technique for independently measuring internal flux surface shapes, because it is widely believed that X-ray emissivity should be constant on a magnetic flux surface. In the Alcator C-Mod tokamak, the X-ray tomography diagnostic system consists of four arrays of 38 chords each. A comparison of reconstructed X-ray contours with magnetic flux surfaces shows a small but consistent discrepancy in the radial profile of elongation. Numerous computational tests have been performed to verify these findings, including tests of the sensitivity to calibration and viewing geometry errors, the accuracy of the tomography reconstruction algorithms, and other subtler effects. We conclude that the discrepancy between the X-ray contours and the magnetic flux surfaces is real, leading to the conclusion that X-ray emissivity is not exactly constant on a flux surface. (orig.)

Convective boundary layer flow and heat transfer in a nanofluid in the presence of second order slip, constant heat flux and zero nanoparticles flux

Energy Technology Data Exchange (ETDEWEB)

Rahman, M.M., E-mail: mansurdu@yahoo.com [Department of Mathematics and Statistics, College of Science, Sultan Qaboos University, PO Box 36, PC 123 Al-Khod, Muscat (Oman); Al-Rashdi, Maryam H. [Department of Mathematics and Statistics, College of Science, Sultan Qaboos University, PO Box 36, PC 123 Al-Khod, Muscat (Oman); Pop, I. [Department of Mathematics, Faculty of Mathematics and Computer Science, Babeş-Bolyai University, Cluj-Napoca 400084 (Romania)

2016-02-15

Highlights: • Convective boundary layer flow and heat transfer in a nanofluid is investigated. • Second order slip increases the rate of shear stress and decreases the rate of heat transfer in a nanofluid. • In nanofluid flow zero normal flux of the nanoparticles at the surface is realistic to apply. • Multiple solutions are identified for certain values of the parameter space. • The upper branch solution is found to be stable, hence physically realizable. - Abstract: In this work, the effects of the second order slip, constant heat flux, and zero normal flux of the nanoparticles due to thermophoresis on the convective boundary layer flow and heat transfer characteristics in a nanofluid using Buongiorno's model over a permeable shrinking sheet is studied theoretically. The nonlinear coupled similarity equations are solved using the function bvp4c using Matlab. Similarity solutions of the flow, heat transfer and nanoparticles volume fraction are presented graphically for several values of the model parameters. The results show that the application of second order slip at the interface is found to be increased the rate of shear stress and decreased the rate of heat transfer in a nanofluid, so need to be taken into account in nanofluid modeling. The results further indicate that multiple solutions exist for certain values of the parameter space. The stability analysis provides guarantee that the lower branch solution is unstable, while the upper branch solution is stable and physically realizable.

A Combined First and Second Order Variational Approach for Image Reconstruction

KAUST Repository

Papafitsoros, K.

2013-05-10

In this paper we study a variational problem in the space of functions of bounded Hessian. Our model constitutes a straightforward higher-order extension of the well known ROF functional (total variation minimisation) to which we add a non-smooth second order regulariser. It combines convex functions of the total variation and the total variation of the first derivatives. In what follows, we prove existence and uniqueness of minimisers of the combined model and present the numerical solution of the corresponding discretised problem by employing the split Bregman method. The paper is furnished with applications of our model to image denoising, deblurring as well as image inpainting. The obtained numerical results are compared with results obtained from total generalised variation (TGV), infimal convolution and Euler\\'s elastica, three other state of the art higher-order models. The numerical discussion confirms that the proposed higher-order model competes with models of its kind in avoiding the creation of undesirable artifacts and blocky-like structures in the reconstructed images-a known disadvantage of the ROF model-while being simple and efficiently numerically solvable. ©Springer Science+Business Media New York 2013.

Evaluation of image reconstruction methods for {sup 123}I-MIBG-SPECT. A rank-order study

Energy Technology Data Exchange (ETDEWEB)

Soederberg, Marcus; Mattsson, Soeren; Oddstig, Jenny; Uusijaervi-Lizana, Helena; Leide-Svegborn, Sigrid [Medical Radiation Physics, Dept. of Clinical Sciences Malmoe, Lund Univ., Skaane Univ. Hospital, Malmoe (Sweden)], e-mail: marcus.soderberg@med.lu.se; Valind, Sven; Thorsson, Ola; Garpered, Sabine [Dept. of Clinical Physiology, Skaane Univ. Hospital, Malmoe (Sweden); Prautzsch, Tilmann [Scivis wissenschaftlice Bildverarbeitung GmbH, Goettingen (Germany); Tischenko, Oleg [Research Unit Medical Radiation Physics and Diagnostics (AMSD), Helmholtz Zentrum Muenchen (Germany); German Research Center for Environmental Health, Neuherberg (Germany)

2012-09-15

Background: There is an opportunity to improve the image quality and lesion detectability in single photon emission computed tomography (SPECT) by choosing an appropriate reconstruction method and optimal parameters for the reconstruction. Purpose: To optimize the use of the Flash 3D reconstruction algorithm in terms of equivalent iteration (EI) number (number of subsets times the number of iterations) and to compare with two recently developed reconstruction algorithms ReSPECT and orthogonal polynomial expansion on disc (OPED) for application on {sup 123}I-metaiodobenzylguanidine (MIBG)-SPECT. Material and Methods: Eleven adult patients underwent SPECT 4 h and 14 patients 24 h after injection of approximately 200 MBq {sup 123}I-MIBG using a Siemens Symbia T6 SPECT/CT. Images were reconstructed from raw data using the Flash 3D algorithm at eight different EI numbers. The images were ranked by three experienced nuclear medicine physicians according to their overall impression of the image quality. The obtained optimal images were then compared in one further visual comparison with images reconstructed using the ReSPECT and OPED algorithms. Results: The optimal EI number for Flash 3D was determined to be 32 for acquisition 4 h and 24 h after injection. The average rank order (best first) for the different reconstructions for acquisition after 4 h was: Flash 3D{sub 32} > ReSPECT > Flash 3D{sub 64} > OPED, and after 24 h: Flash 3D{sub 16} > ReSPECT > Flash 3D{sub 32} > OPED. A fair level of inter-observer agreement concerning optimal EI number and reconstruction algorithm was obtained, which may be explained by the different individual preferences of what is appropriate image quality. Conclusion: Using Siemens Symbia T6 SPECT/CT and specified acquisition parameters, Flash 3D{sub 32} (4 h) and Flash 3D{sub 16} (24 h), followed by ReSPECT, were assessed to be the preferable reconstruction algorithms in visual assessment of {sup 123}I-MIBG images.

Quantifying the drivers of ocean-atmosphere CO2 fluxes

Science.gov (United States)

Lauderdale, Jonathan M.; Dutkiewicz, Stephanie; Williams, Richard G.; Follows, Michael J.

2016-07-01

A mechanistic framework for quantitatively mapping the regional drivers of air-sea CO2 fluxes at a global scale is developed. The framework evaluates the interplay between (1) surface heat and freshwater fluxes that influence the potential saturated carbon concentration, which depends on changes in sea surface temperature, salinity and alkalinity, (2) a residual, disequilibrium flux influenced by upwelling and entrainment of remineralized carbon- and nutrient-rich waters from the ocean interior, as well as rapid subduction of surface waters, (3) carbon uptake and export by biological activity as both soft tissue and carbonate, and (4) the effect on surface carbon concentrations due to freshwater precipitation or evaporation. In a steady state simulation of a coarse-resolution ocean circulation and biogeochemistry model, the sum of the individually determined components is close to the known total flux of the simulation. The leading order balance, identified in different dynamical regimes, is between the CO2 fluxes driven by surface heat fluxes and a combination of biologically driven carbon uptake and disequilibrium-driven carbon outgassing. The framework is still able to reconstruct simulated fluxes when evaluated using monthly averaged data and takes a form that can be applied consistently in models of different complexity and observations of the ocean. In this way, the framework may reveal differences in the balance of drivers acting across an ensemble of climate model simulations or be applied to an analysis and interpretation of the observed, real-world air-sea flux of CO2.

MO-DE-207A-08: Four-Dimensional Cone-Beam CT Iterative Reconstruction with Time-Ordered Chain Graph Model for Non-Periodic Organ Motion and Deformation

Energy Technology Data Exchange (ETDEWEB)

Nakano, M; Haga, A; Hanaoka, S; Nakagawa, K [The University of Tokyo Hospital, Bunkyo-ku, Tokyo (Japan); Kotoku, J [Teikyo University, Itabashi-ku, Tokyo (Japan); Magome, T [Komazawa University, Setagaya-ku, Tokyo (Japan); Masutani, Y [Hiroshima-City University, Hiroshima, Hiroshima (Japan)

2016-06-15

Purpose: The purpose of this study is to propose a new concept of four-dimensional (4D) cone-beam CT (CBCT) reconstruction for non-periodic organ motion using the Time-ordered Chain Graph Model (TCGM), and to compare the reconstructed results with the previously proposed methods, the total variation-based compressed sensing (TVCS) and prior-image constrained compressed sensing (PICCS). Methods: CBCT reconstruction method introduced in this study consisted of maximum a posteriori (MAP) iterative reconstruction combined with a regularization term derived from a concept of TCGM, which includes a constraint coming from the images of neighbouring time-phases. The time-ordered image series were concurrently reconstructed in the MAP iterative reconstruction framework. Angular range of projections for each time-phase was 90 degrees for TCGM and PICCS, and 200 degrees for TVCS. Two kinds of projection data, an elliptic-cylindrical digital phantom data and two clinical patients’ data, were used for reconstruction. The digital phantom contained an air sphere moving 3 cm along longitudinal axis, and temporal resolution of each method was evaluated by measuring the penumbral width of reconstructed moving air sphere. The clinical feasibility of non-periodic time-ordered 4D CBCT reconstruction was also examined using projection data of prostate cancer patients. Results: The results of reconstructed digital phantom shows that the penumbral widths of TCGM yielded the narrowest result; PICCS and TCGM were 10.6% and 17.4% narrower than that of TVCS, respectively. This suggests that the TCGM has the better temporal resolution than the others. Patients’ CBCT projection data were also reconstructed and all three reconstructed results showed motion of rectal gas and stool. The result of TCGM provided visually clearer and less blurring images. Conclusion: The present study demonstrates that the new concept for 4D CBCT reconstruction, TCGM, combined with MAP iterative reconstruction

Third Order Reconstruction of the KP Scheme for Model of River Tinnelva

Directory of Open Access Journals (Sweden)

Susantha Dissanayake

2017-01-01

Full Text Available The Saint-Venant equation/Shallow Water Equation is used to simulate flow of river, flow of liquid in an open channel, tsunami etc. The Kurganov-Petrova (KP scheme which was developed based on the local speed of discontinuity propagation, can be used to solve hyperbolic type partial differential equations (PDEs, hence can be used to solve the Saint-Venant equation. The KP scheme is semi discrete: PDEs are discretized in the spatial domain, resulting in a set of Ordinary Differential Equations (ODEs. In this study, the common 2nd order KP scheme is extended into 3rd order scheme while following the Weighted Essentially Non-Oscillatory (WENO and Central WENO (CWENO reconstruction steps. Both the 2nd order and 3rd order schemes have been used in simulation in order to check the suitability of the KP schemes to solve hyperbolic type PDEs. The simulation results indicated that the 3rd order KP scheme shows some better stability compared to the 2nd order scheme. Computational time for the 3rd order KP scheme for variable step-length ode solvers in MATLAB is less compared to the computational time of the 2nd order KP scheme. In addition, it was confirmed that the order of the time integrators essentially should be lower compared to the order of the spatial discretization. However, for computation of abrupt step changes, the 2nd order KP scheme shows a more accurate solution.

Statistical analysis of nonlinearly reconstructed near-infrared tomographic images: Part I--Theory and simulations.

Science.gov (United States)

Pogue, Brian W; Song, Xiaomei; Tosteson, Tor D; McBride, Troy O; Jiang, Shudong; Paulsen, Keith D

2002-07-01

Near-infrared (NIR) diffuse tomography is an emerging method for imaging the interior of tissues to quantify concentrations of hemoglobin and exogenous chromophores non-invasively in vivo. It often exploits an optical diffusion model-based image reconstruction algorithm to estimate spatial property values from measurements of the light flux at the surface of the tissue. In this study, mean-squared error (MSE) over the image is used to evaluate methods for regularizing the ill-posed inverse image reconstruction problem in NIR tomography. Estimates of image bias and image standard deviation were calculated based upon 100 repeated reconstructions of a test image with randomly distributed noise added to the light flux measurements. It was observed that the bias error dominates at high regularization parameter values while variance dominates as the algorithm is allowed to approach the optimal solution. This optimum does not necessarily correspond to the minimum projection error solution, but typically requires further iteration with a decreasing regularization parameter to reach the lowest image error. Increasing measurement noise causes a need to constrain the minimum regularization parameter to higher values in order to achieve a minimum in the overall image MSE.

Thermodynamics of the Heat-Flux Avalanches at the First-Order Magnetic Transition in Magnetocaloric Materials

Science.gov (United States)

Piazzi, Marco; Bennati, Cecilia; Basso, Vittorio

2017-10-01

We investigate the kinetics of first-order magnetic phase transitions by measuring and modeling the heat-flux avalanches corresponding to the irreversible motion of the phase-boundary interface separating the coexisting low- and high-temperature stable magnetic phases. By means of out-of-equilibrium thermodynamics, we encompass the damping mechanisms of the boundary motion in a phenomenological parameter αs. By analyzing the time behavior of the heat-flux signals measured on La (Fe -Mn -Si )13-H magnetocaloric compounds through Peltier calorimetry temperature scans performed at low rates, we relate the linear rise of the individual avalanches to the intrinsic-damping parameter αs.

Use of higher order signal moments and high speed digital sampling technique for neutron flux measurements

Science.gov (United States)

Baers, L. B.; Gutierrez, T. Rivero; Mendoza, R. A. Carrillo; Santana, G. Jimenez

1993-08-01

The second (conventional variance or Campbell signal), the third, and the modified fourth order central signal moments associated with the amplified and filtered currents from two electrodes of an ex-core neutron sensitive fission detector were measured versus the reactor power of the 1-MW TRIGA reactor in Mexico City. Two channels of a high-speed (400-MHz) multiplexing data sampler and an analog-to-digital converter with 12-b resolution and 1-Mword buffer memory were used. The data were further retrieved into a PC, and estimates for autocorrelation and cross-correlation moments up to the fifth order, coherence, skewness, excess, etc., quantities were calculated offline. Five-mode operation of the detector was achieved, including conventional counting rates and currents in agreement with theory and the authors' previous results with analog techniques. The signals are proportional to the neutron flux and reactor power in some flux ranges. The suppression of background noise is improved and the lower limit of the measurement range is extended as the order of moment is increased, in agreement with theory.

Vortex lattice ordering in the flux flow state of Nb thin films

International Nuclear Information System (INIS)

Grimaldi, Gaia; Leo, Antonio; Nigro, Angela; Pace, Sandro

2010-01-01

We measure current-voltage characteristics at high driving currents for different magnetic fields and temperatures in Nb thin films of rather strong pinning. In a definite range of the B-T phase diagram we find that a current induced transition occurs in the flux flow motion of the vortex lattice, namely a dynamic ordering (DO). Contrary to the case of weaker pinning materials, DO is observed only at low fields, due to the stronger intrinsic disorder that can deform plastically the moving vortex lattice even for small applied fields.

Reconstructing the long-term cosmic ray intensity: linear relations do not work

Directory of Open Access Journals (Sweden)

K. Mursula

2003-04-01

Full Text Available It was recently suggested (Lockwood, 2001 that the cosmic ray intensity in the neutron monitor energy range is linearly related to the coronal source flux, and can be reconstructed for the last 130 years using the long-term coronal flux estimated earlier. Moreover, Lockwood (2001 reconstructed the coronal flux for the last 500 years using a similar linear relation between the flux and the concentration of cosmogenic 10 Be isotopes in polar ice. Here we show that the applied linear relations are oversimplified and lead to unphysical results on long time scales. In particular, the cosmic ray intensity reconstructed by Lockwood (2001 for the last 130 years has a steep trend which is considerably larger than the trend estimated from observations during the last 65 years. Accordingly, the reconstructed cosmic ray intensity reaches or even exceeds the local interstellar cosmic ray flux around 1900. We argue that these unphysical results obtained when using linear relations are due to the oversimplified approach which does not take into account the complex and essentially nonlinear nature of long-term cosmic ray modulation in the heliosphere. We also compare the long-term cosmic ray intensity based on a linear treatment with the reconstruction based on a recent physical model which predicts a considerably lower cosmic ray intensity around 1900.Key words. Interplanetary physics (cosmic rays; heliopause and solar wind termination – Geomagnetism and paleomagnetism (time variations, secular and long-term

Well-balanced schemes for the Euler equations with gravitation: Conservative formulation using global fluxes

Science.gov (United States)

Chertock, Alina; Cui, Shumo; Kurganov, Alexander; Özcan, Şeyma Nur; Tadmor, Eitan

2018-04-01

We develop a second-order well-balanced central-upwind scheme for the compressible Euler equations with gravitational source term. Here, we advocate a new paradigm based on a purely conservative reformulation of the equations using global fluxes. The proposed scheme is capable of exactly preserving steady-state solutions expressed in terms of a nonlocal equilibrium variable. A crucial step in the construction of the second-order scheme is a well-balanced piecewise linear reconstruction of equilibrium variables combined with a well-balanced central-upwind evolution in time, which is adapted to reduce the amount of numerical viscosity when the flow is at (near) steady-state regime. We show the performance of our newly developed central-upwind scheme and demonstrate importance of perfect balance between the fluxes and gravitational forces in a series of one- and two-dimensional examples.

A Fourier-based compressed sensing technique for accelerated CT image reconstruction using first-order methods

International Nuclear Information System (INIS)

Choi, Kihwan; Li, Ruijiang; Nam, Haewon; Xing, Lei

2014-01-01

As a solution to iterative CT image reconstruction, first-order methods are prominent for the large-scale capability and the fast convergence rate O(1/k 2 ). In practice, the CT system matrix with a large condition number may lead to slow convergence speed despite the theoretically promising upper bound. The aim of this study is to develop a Fourier-based scaling technique to enhance the convergence speed of first-order methods applied to CT image reconstruction. Instead of working in the projection domain, we transform the projection data and construct a data fidelity model in Fourier space. Inspired by the filtered backprojection formalism, the data are appropriately weighted in Fourier space. We formulate an optimization problem based on weighted least-squares in the Fourier space and total-variation (TV) regularization in image space for parallel-beam, fan-beam and cone-beam CT geometry. To achieve the maximum computational speed, the optimization problem is solved using a fast iterative shrinkage-thresholding algorithm with backtracking line search and GPU implementation of projection/backprojection. The performance of the proposed algorithm is demonstrated through a series of digital simulation and experimental phantom studies. The results are compared with the existing TV regularized techniques based on statistics-based weighted least-squares as well as basic algebraic reconstruction technique. The proposed Fourier-based compressed sensing (CS) method significantly improves both the image quality and the convergence rate compared to the existing CS techniques. (paper)

A Fourier-based compressed sensing technique for accelerated CT image reconstruction using first-order methods.

Science.gov (United States)

Choi, Kihwan; Li, Ruijiang; Nam, Haewon; Xing, Lei

2014-06-21

As a solution to iterative CT image reconstruction, first-order methods are prominent for the large-scale capability and the fast convergence rate [Formula: see text]. In practice, the CT system matrix with a large condition number may lead to slow convergence speed despite the theoretically promising upper bound. The aim of this study is to develop a Fourier-based scaling technique to enhance the convergence speed of first-order methods applied to CT image reconstruction. Instead of working in the projection domain, we transform the projection data and construct a data fidelity model in Fourier space. Inspired by the filtered backprojection formalism, the data are appropriately weighted in Fourier space. We formulate an optimization problem based on weighted least-squares in the Fourier space and total-variation (TV) regularization in image space for parallel-beam, fan-beam and cone-beam CT geometry. To achieve the maximum computational speed, the optimization problem is solved using a fast iterative shrinkage-thresholding algorithm with backtracking line search and GPU implementation of projection/backprojection. The performance of the proposed algorithm is demonstrated through a series of digital simulation and experimental phantom studies. The results are compared with the existing TV regularized techniques based on statistics-based weighted least-squares as well as basic algebraic reconstruction technique. The proposed Fourier-based compressed sensing (CS) method significantly improves both the image quality and the convergence rate compared to the existing CS techniques.

Understanding reconstructed Dante spectra using high resolution spectroscopy

Energy Technology Data Exchange (ETDEWEB)

May, M. J., E-mail: may13@llnl.gov; Widmann, K.; Kemp, G. E.; Thorn, D.; Colvin, J. D.; Schneider, M. B.; Moore, A.; Blue, B. E. [L-170 Lawrence Livermore National Laboratory, 7000 East Ave., Livermore, California 94551 (United States); Weaver, J. [Naval Research Laboratory, 4555 Overlook Ave. SW, Washington, DC 20375 (United States)

2016-11-15

The Dante is an 18 channel filtered diode array used at the National Ignition Facility (NIF) to measure the spectrally and temporally resolved radiation flux between 50 eV and 20 keV from various targets. The absolute flux is determined from the radiometric calibration of the x-ray diodes, filters, and mirrors and a reconstruction algorithm applied to the recorded voltages from each channel. The reconstructed spectra are very low resolution with features consistent with the instrument response and are not necessarily consistent with the spectral emission features from the plasma. Errors may exist between the reconstructed spectra and the actual emission features due to assumptions in the algorithm. Recently, a high resolution convex crystal spectrometer, VIRGIL, has been installed at NIF with the same line of sight as the Dante. Spectra from L-shell Ag and Xe have been recorded by both VIRGIL and Dante. Comparisons of these two spectroscopic measurements yield insights into the accuracy of the Dante reconstructions.

Poster – 02: Positron Emission Tomography (PET) Imaging Reconstruction using higher order Scattered Photon Coincidences

Energy Technology Data Exchange (ETDEWEB)

Sun, Hongwei; Pistorius, Stephen [Department of Physics and Astronomy, University of Manitoba, CancerCare, Manitoba (Canada)

2016-08-15

PET images are affected by the presence of scattered photons. Incorrect scatter-correction may cause artifacts, particularly in 3D PET systems. Current scatter reconstruction methods do not distinguish between single and higher order scattered photons. A dual-scattered reconstruction method (GDS-MLEM) that is independent of the number of Compton scattering interactions and less sensitive to the need for high energy resolution detectors, is proposed. To avoid overcorrecting for scattered coincidences, the attenuation coefficient was calculated by integrating the differential Klein-Nishina cross-section over a restricted energy range, accounting only for scattered photons that were not detected. The optimum image can be selected by choosing an energy threshold which is the upper energy limit for the calculation of the cross-section and the lower limit for scattered photons in the reconstruction. Data was simulated using the GATE platform. 500,000 multiple scattered photon coincidences with perfect energy resolution were reconstructed using various methods. The GDS-MLEM algorithm had the highest confidence (98%) in locating the annihilation position and was capable of reconstructing the two largest hot regions. 100,000 photon coincidences, with a scatter fraction of 40%, were used to test the energy resolution dependence of different algorithms. With a 350–650 keV energy window and the restricted attenuation correction model, the GDS-MLEM algorithm was able to improve contrast recovery and reduce the noise by 7.56%–13.24% and 12.4%–24.03%, respectively. This approach is less sensitive to the energy resolution and shows promise if detector energy resolutions of 12% can be achieved.

Analysis of PWR control rod ejection accident with the coupled code system SKETCH-INS/TRACE by incorporating pin power reconstruction model

International Nuclear Information System (INIS)

Nakajima, T.; Sakai, T.

2010-01-01

The pin power reconstruction model was incorporated in the 3-D nodal kinetics code SKETCH-INS in order to produce accurate calculation of three-dimensional pin power distributions throughout the reactor core. In order to verify the employed pin power reconstruction model, the PWR MOX/UO_2 core transient benchmark problem was analyzed with the coupled code system SKETCH-INS/TRACE by incorporating the model and the influence of pin power reconstruction model was studied. SKETCH-INS pin power distributions for 3 benchmark problems were compared with the PARCS solutions which were provided by the host organisation of the benchmark. SKETCH-INS results were in good agreement with the PARCS results. The capability of employed pin power reconstruction model was confirmed through the analysis of benchmark problems. A PWR control rod ejection benchmark problem was analyzed with the coupled code system SKETCH-INS/ TRACE by incorporating the pin power reconstruction model. The influence of pin power reconstruction model was studied by comparing with the result of conventional node averaged flux model. The results indicate that the pin power reconstruction model has significant effect on the pin powers during transient and hence on the fuel enthalpy

ADAPTIVE FLUX OBSERVER FOR PERMANENT MAGNET SYNCHRONOUS MOTORS

Directory of Open Access Journals (Sweden)

A. A. Bobtsov

2015-01-01

Full Text Available The paper deals with the observer design problem for a flux in permanent magnet synchronous motors. It is assumed that some electrical parameters such as resistance and inductance are known numbers. But the flux, the angle and the speed of the rotor are unmeasurable. The new robust approach to design an adaptive flux observer is proposed that guarantees globally boundedness of all signals and, moreover, exponential convergence to zero of observer error between the true flux value and an estimate obtained from the adaptive observer. The problem of an adaptive flux observer design has been solved with using the trigonometrical properties and linear filtering which ensures cancellation of unknown terms arisen after mathematical calculations. The key idea is the new parameterization of the dynamical model containing unknown parameters and depending on measurable current and voltage in the motor. By applying the Pythagorean trigonometric identity the linear equation has found that does not contain any functions depending on angle or angular velocity of the rotor. Using dynamical first-order filters the standard regression model is obtained that consists of unknown constant parameters and measurable functions of time. Then the gradient-like estimator is designed to reconstruct unknown parameters, and it guarantees boundedness of all signals in the system. The proposition is proved that if the regressor satisfies the persistent excitation condition, meaning the “frequency-rich” signal, then all errors in observer exponentially converges to zero. It is shown that observer error for the flux explicitly depends on estimator errors. Exponential convergence of parameter estimation errors to zero yields exponential convergence of the flux observer error to zero. The numerical example is considered.

Current constrained voltage scaled reconstruction (CCVSR) algorithm for MR-EIT and its performance with different probing current patterns

International Nuclear Information System (INIS)

Birguel, Oezlem; Eyueboglu, B Murat; Ider, Y Ziya

2003-01-01

Conventional injected-current electrical impedance tomography (EIT) and magnetic resonance imaging (MRI) techniques can be combined to reconstruct high resolution true conductivity images. The magnetic flux density distribution generated by the internal current density distribution is extracted from MR phase images. This information is used to form a fine detailed conductivity image using an Ohm's law based update equation. The reconstructed conductivity image is assumed to differ from the true image by a scale factor. EIT surface potential measurements are then used to scale the reconstructed image in order to find the true conductivity values. This process is iterated until a stopping criterion is met. Several simulations are carried out for opposite and cosine current injection patterns to select the best current injection pattern for a 2D thorax model. The contrast resolution and accuracy of the proposed algorithm are also studied. In all simulation studies, realistic noise models for voltage and magnetic flux density measurements are used. It is shown that, in contrast to the conventional EIT techniques, the proposed method has the capability of reconstructing conductivity images with uniform and high spatial resolution. The spatial resolution is limited by the larger element size of the finite element mesh and twice the magnetic resonance image pixel size

MicrobesFlux: a web platform for drafting metabolic models from the KEGG database

Directory of Open Access Journals (Sweden)

Feng Xueyang

2012-08-01

Full Text Available Abstract Background Concurrent with the efforts currently underway in mapping microbial genomes using high-throughput sequencing methods, systems biologists are building metabolic models to characterize and predict cell metabolisms. One of the key steps in building a metabolic model is using multiple databases to collect and assemble essential information about genome-annotations and the architecture of the metabolic network for a specific organism. To speed up metabolic model development for a large number of microorganisms, we need a user-friendly platform to construct metabolic networks and to perform constraint-based flux balance analysis based on genome databases and experimental results. Results We have developed a semi-automatic, web-based platform (MicrobesFlux for generating and reconstructing metabolic models for annotated microorganisms. MicrobesFlux is able to automatically download the metabolic network (including enzymatic reactions and metabolites of ~1,200 species from the KEGG database (Kyoto Encyclopedia of Genes and Genomes and then convert it to a metabolic model draft. The platform also provides diverse customized tools, such as gene knockouts and the introduction of heterologous pathways, for users to reconstruct the model network. The reconstructed metabolic network can be formulated to a constraint-based flux model to predict and analyze the carbon fluxes in microbial metabolisms. The simulation results can be exported in the SBML format (The Systems Biology Markup Language. Furthermore, we also demonstrated the platform functionalities by developing an FBA model (including 229 reactions for a recent annotated bioethanol producer, Thermoanaerobacter sp. strain X514, to predict its biomass growth and ethanol production. Conclusion MicrobesFlux is an installation-free and open-source platform that enables biologists without prior programming knowledge to develop metabolic models for annotated microorganisms in the KEGG

A Reconstruction Approach to High-Order Schemes Including Discontinuous Galerkin for Diffusion

Science.gov (United States)

Huynh, H. T.

2009-01-01

We introduce a new approach to high-order accuracy for the numerical solution of diffusion problems by solving the equations in differential form using a reconstruction technique. The approach has the advantages of simplicity and economy. It results in several new high-order methods including a simplified version of discontinuous Galerkin (DG). It also leads to new definitions of common value and common gradient quantities at each interface shared by the two adjacent cells. In addition, the new approach clarifies the relations among the various choices of new and existing common quantities. Fourier stability and accuracy analyses are carried out for the resulting schemes. Extensions to the case of quadrilateral meshes are obtained via tensor products. For the two-point boundary value problem (steady state), it is shown that these schemes, which include most popular DG methods, yield exact common interface quantities as well as exact cell average solutions for nearly all cases.

KoFlux: Korean Regional Flux Network in AsiaFlux

Science.gov (United States)

Kim, J.

2002-12-01

AsiaFlux, the Asian arm of FLUXNET, held the Second International Workshop on Advanced Flux Network and Flux Evaluation in Jeju Island, Korea on 9-11 January 2002. In order to facilitate comprehensive Asia-wide studies of ecosystem fluxes, the meeting launched KoFlux, a new Korean regional network of long-term micrometeorological flux sites. For a successful assessment of carbon exchange between terrestrial ecosystems and the atmosphere, an accurate measurement of surface fluxes of energy and water is one of the prerequisites. During the 7th Global Energy and Water Cycle Experiment (GEWEX) Asian Monsoon Experiment (GAME) held in Nagoya, Japan on 1-2 October 2001, the Implementation Committee of the Coordinated Enhanced Observing Period (CEOP) was established. One of the immediate tasks of CEOP was and is to identify the reference sites to monitor energy and water fluxes over the Asian continent. Subsequently, to advance the regional and global network of these reference sites in the context of both FLUXNET and CEOP, the Korean flux community has re-organized the available resources to establish a new regional network, KoFlux. We have built up domestic network sites (equipped with wind profiler and radiosonde measurements) over deciduous and coniferous forests, urban and rural rice paddies and coastal farmland. As an outreach through collaborations with research groups in Japan, China and Thailand, we also proposed international flux sites at ecologically and climatologically important locations such as a prairie on the Tibetan plateau, tropical forest with mixed and rapid land use change in northern Thailand. Several sites in KoFlux already begun to accumulate interesting data and some highlights are presented at the meeting. The sciences generated by flux networks in other continents have proven the worthiness of a global array of micrometeorological flux towers. It is our intent that the launch of KoFlux would encourage other scientists to initiate and

Testing an inversion method for estimating electron energy fluxes from all-sky camera images

Directory of Open Access Journals (Sweden)

N. Partamies

2004-06-01

Full Text Available An inversion method for reconstructing the precipitating electron energy flux from a set of multi-wavelength digital all-sky camera (ASC images has recently been developed by tomografia. Preliminary tests suggested that the inversion is able to reconstruct the position and energy characteristics of the aurora with reasonable accuracy. This study carries out a thorough testing of the method and a few improvements for its emission physics equations. We compared the precipitating electron energy fluxes as estimated by the inversion method to the energy flux data recorded by the Defense Meteorological Satellite Program (DMSP satellites during four passes over auroral structures. When the aurorae appear very close to the local zenith, the fluxes inverted from the blue (427.8nm filtered ASC images or blue and green line (557.7nm images together give the best agreement with the measured flux values. The fluxes inverted from green line images alone are clearly larger than the measured ones. Closer to the horizon the quality of the inversion results from blue images deteriorate to the level of the ones from green images. In addition to the satellite data, the precipitating electron energy fluxes were estimated from the electron density measurements by the EISCAT Svalbard Radar (ESR. These energy flux values were compared to the ones of the inversion method applied to over 100 ASC images recorded at the nearby ASC station in Longyearbyen. The energy fluxes deduced from these two types of data are in general of the same order of magnitude. In 35% of all of the blue and green image inversions the relative errors were less than 50% and in 90% of the blue and green image inversions less than 100%. This kind of systematic testing of the inversion method is the first step toward using all-sky camera images in the way in which global UV images have recently been used to estimate the energy fluxes. The advantages of ASCs, compared to the space-born imagers, are

Estimation of relative order tensors, and reconstruction of vectors in space using unassigned RDC data and its application

Science.gov (United States)

Miao, Xijiang; Mukhopadhyay, Rishi; Valafar, Homayoun

2008-10-01

Advances in NMR instrumentation and pulse sequence design have resulted in easier acquisition of Residual Dipolar Coupling (RDC) data. However, computational and theoretical analysis of this type of data has continued to challenge the international community of investigators because of their complexity and rich information content. Contemporary use of RDC data has required a-priori assignment, which significantly increases the overall cost of structural analysis. This article introduces a novel algorithm that utilizes unassigned RDC data acquired from multiple alignment media ( nD-RDC, n ⩾ 3) for simultaneous extraction of the relative order tensor matrices and reconstruction of the interacting vectors in space. Estimation of the relative order tensors and reconstruction of the interacting vectors can be invaluable in a number of endeavors. An example application has been presented where the reconstructed vectors have been used to quantify the fitness of a template protein structure to the unknown protein structure. This work has other important direct applications such as verification of the novelty of an unknown protein and validation of the accuracy of an available protein structure model in drug design. More importantly, the presented work has the potential to bridge the gap between experimental and computational methods of structure determination.

A semi-experimental nodal synthesis method for the on-line reconstruction of three-dimensional neutron flux-shapes and reactivity

International Nuclear Information System (INIS)

Jacqmin, R.P.

1991-01-01

The safety and optimal performance of large, commercial, light-water reactors require the knowledge at all time of the neutron-flux distribution in the core. In principle, this information can be obtained by solving the time-dependent neutron diffusion equations. However, this approach is complicated and very expensive. Sufficiently accurate, real-time calculations (time scale of approximately one second) are not yet possible on desktop computers, even with fast-running, nodal kinetics codes. A semi-experimental, nodal synthesis method which avoids the solution of the time-dependent, neutron diffusion equations is described. The essential idea of this method is to approximate instantaneous nodal group-fluxes by a linear combination of K, precomputed, three-dimensional, static expansion-functions. The time-dependent coefficients of the combination are found from the requirement that the reconstructed flux-distribution agree in a least-squares sense with the readings of J (≥K) fixed, prompt-responding neutron-detectors. Possible numerical difficulties with the least-squares solution of the ill-conditioned, J-by-K system of equations are brought under complete control by the use of a singular-value-decomposition technique. This procedure amounts to the rearrangement of the original, linear combination of K expansion functions into an equivalent more convenient, linear combination of R (≤K) orthogonalized ''modes'' of decreasing magnitude. Exceedingly small modes are zeroed to eliminate any risk of roundoff-error amplification, and to assure consistency with the limited accuracy of the data. Additional modes are zeroed when it is desirable to limit the sensitivity of the results to measurement noise

A semi-experimental nodal synthesis method for the on-line reconstruction of three-dimensional neutron flux-shapes and reactivity

Energy Technology Data Exchange (ETDEWEB)

Jacqmin, R.P.

1991-12-10

The safety and optimal performance of large, commercial, light-water reactors require the knowledge at all time of the neutron-flux distribution in the core. In principle, this information can be obtained by solving the time-dependent neutron diffusion equations. However, this approach is complicated and very expensive. Sufficiently accurate, real-time calculations (time scale of approximately one second) are not yet possible on desktop computers, even with fast-running, nodal kinetics codes. A semi-experimental, nodal synthesis method which avoids the solution of the time-dependent, neutron diffusion equations is described. The essential idea of this method is to approximate instantaneous nodal group-fluxes by a linear combination of K, precomputed, three-dimensional, static expansion-functions. The time-dependent coefficients of the combination are found from the requirement that the reconstructed flux-distribution agree in a least-squares sense with the readings of J ({ge}K) fixed, prompt-responding neutron-detectors. Possible numerical difficulties with the least-squares solution of the ill-conditioned, J-by-K system of equations are brought under complete control by the use of a singular-value-decomposition technique. This procedure amounts to the rearrangement of the original, linear combination of K expansion functions into an equivalent more convenient, linear combination of R ({le}K) orthogonalized modes'' of decreasing magnitude. Exceedingly small modes are zeroed to eliminate any risk of roundoff-error amplification, and to assure consistency with the limited accuracy of the data. Additional modes are zeroed when it is desirable to limit the sensitivity of the results to measurement noise.

Design of a flux buffer based on the flux shuttle

International Nuclear Information System (INIS)

Gershenson, M.

1991-01-01

This paper discusses the design considerations for a flux buffer based on the flux-shuttle concept. Particular attention is given to the issues of flux popping, stability of operation and saturation levels for a large input. Modulation techniques used in order to minimize 1/f noise, in addition to offsets are also analyzed. Advantages over conventional approaches using a SQUID for a flux buffer are discussed. Results of computer simulations are presented

A third-order gas-kinetic CPR method for the Euler and Navier-Stokes equations on triangular meshes

Science.gov (United States)

Zhang, Chao; Li, Qibing; Fu, Song; Wang, Z. J.

2018-06-01

A third-order accurate gas-kinetic scheme based on the correction procedure via reconstruction (CPR) framework is developed for the Euler and Navier-Stokes equations on triangular meshes. The scheme combines the accuracy and efficiency of the CPR formulation with the multidimensional characteristics and robustness of the gas-kinetic flux solver. Comparing with high-order finite volume gas-kinetic methods, the current scheme is more compact and efficient by avoiding wide stencils on unstructured meshes. Unlike the traditional CPR method where the inviscid and viscous terms are treated differently, the inviscid and viscous fluxes in the current scheme are coupled and computed uniformly through the kinetic evolution model. In addition, the present scheme adopts a fully coupled spatial and temporal gas distribution function for the flux evaluation, achieving high-order accuracy in both space and time within a single step. Numerical tests with a wide range of flow problems, from nearly incompressible to supersonic flows with strong shocks, for both inviscid and viscous problems, demonstrate the high accuracy and efficiency of the present scheme.

Investigation of some possible changes in Am-Be neutron source configuration in order to increase the thermal neutron flux using Monte Carlo code

Science.gov (United States)

Basiri, H.; Tavakoli-Anbaran, H.

2018-01-01

Am-Be neutrons source is based on (α, n) reaction and generates neutrons in the energy range of 0-11 MeV. Since the thermal neutrons are widely used in different fields, in this work, we investigate how to improve the source configuration in order to increase the thermal flux. These suggested changes include a spherical moderator instead of common cylindrical geometry, a reflector layer and an appropriate materials selection in order to achieve the maximum thermal flux. All calculations were done by using MCNP1 Monte Carlo code. Our final results indicated that a spherical paraffin moderator, a layer of beryllium as a reflector can efficiently increase the thermal neutron flux of Am-Be source.

Current profile reconstruction using electron temperature imaging diagnostics

International Nuclear Information System (INIS)

Tritz, K.; Stutman, D.; Delgado-Aparicio, L.F.; Finkenthal, M.; Pacella, D.; Kaita, R.; Stratton, B.; Sabbagh, S.

2004-01-01

Flux surface shape information can be used to constrain the current profile for reconstruction of the plasma equilibrium. One method of inferring flux surface shape relies on plasma x-ray emission; however, deviations from the flux surfaces due to impurity and density asymmetries complicate the interpretation. Electron isotherm surfaces should correspond well to the plasma flux surfaces, and equilibrium constraint modeling using this isotherm information constrains the current profile. The KFIT code is used to assess the profile uncertainty and to optimize the number, location and SNR required for the Te detectors. As Te imaging detectors we consider tangentially viewing, vertically spaced, linear gas electron multiplier arrays operated in pulse height analysis (PHA) mode and multifoil soft x-ray arrays. Isoflux coordinate sets provided by T e measurements offer a strong constraint on the equilibrium reconstruction in both a stacked horizontal array configuration and a crossed horizontal and vertical beam system, with q 0 determined to within ±4%. The required SNR can be provided with either PHA or multicolor diagnostic techniques, though the multicolor system requires ∼x4 better statistics for comparable final errors

Reconstruction and measurement of cosmogenic signals in the neutrino experiment Borexino

International Nuclear Information System (INIS)

Meindl, Johannes Quirin

2013-01-01

Underground laboratories around the globe provide low-count rate experiments with the necessary shielding against the large flux of cosmic muons present at the Earth's surface. Depending on the depth of the underground site, the muon flux is reduced by up to eight orders of magnitude. Hower, the residual muons, and the neutrons and radioisotopes they produce in nuclear spallation processes, still pose a significant background for many of these experiments. This thesis focusses on cosmogenic background signals in the neutrino experiment Borexino, which is located at the Laboratori Nazionali del Gran Sasso underground site at a depth of 3800 meters of water equivalent. The work encompasses the identification, spatial reconstruction, and measurement of rates and production yields of these cosmogenic events. For the efficient tagging of long-lived cosmogenic radioisotopes of lifetimes in the order of seconds and longer, the spatial reconstruction of the parent muon is essential. Based on the characteristic light emission profile of muons crossing the inner detector of Borexino, a new muon track reconstruction algorithm was developed. Furthermore, to increase the performance of the existing muon track reconstruction of Borexino's outer detector, a routine was programmed to automatically calibrate the photomultiplier tubes in timing and charge response. Muons entering the experiment can cause fast secondary signals from decays and captures of stopped muons, and the captures of muon-induced neutrons. To identify these events in the high noise environment after the muon, dedicated search algorithms were developed. Based on the detected signals, these fast muon-correlated events are studied. The fraction and lifetime of stopped muons are found to be in agreement with expectations. The production yield of cosmogenic neutrons is measured to (3.10±0.07 stat ±0.08 syst ) . 10 -4 n/(μ . (g/cm 2 )). The corresponding capture time in the Borexino scintillator pseudocumene is

A regularized relaxed ordered subset list-mode reconstruction algorithm and its preliminary application to undersampling PET imaging

International Nuclear Information System (INIS)

Cao, Xiaoqing; Xie, Qingguo; Xiao, Peng

2015-01-01

List mode format is commonly used in modern positron emission tomography (PET) for image reconstruction due to certain special advantages. In this work, we proposed a list mode based regularized relaxed ordered subset (LMROS) algorithm for static PET imaging. LMROS is able to work with regularization terms which can be formulated as twice differentiable convex functions. Such a versatility would make LMROS a convenient and general framework for fulfilling different regularized list mode reconstruction methods. LMROS was applied to two simulated undersampling PET imaging scenarios to verify its effectiveness. Convex quadratic function, total variation constraint, non-local means and dictionary learning based regularization methods were successfully realized for different cases. The results showed that the LMROS algorithm was effective and some regularization methods greatly reduced the distortions and artifacts caused by undersampling. (paper)

Adaptive algebraic reconstruction technique

International Nuclear Information System (INIS)

Lu Wenkai; Yin Fangfang

2004-01-01

Algebraic reconstruction techniques (ART) are iterative procedures for reconstructing objects from their projections. It is proven that ART can be computationally efficient by carefully arranging the order in which the collected data are accessed during the reconstruction procedure and adaptively adjusting the relaxation parameters. In this paper, an adaptive algebraic reconstruction technique (AART), which adopts the same projection access scheme in multilevel scheme algebraic reconstruction technique (MLS-ART), is proposed. By introducing adaptive adjustment of the relaxation parameters during the reconstruction procedure, one-iteration AART can produce reconstructions with better quality, in comparison with one-iteration MLS-ART. Furthermore, AART outperforms MLS-ART with improved computational efficiency

A new open-source pin power reconstruction capability in DRAGON5 and DONJON5 neutronic codes

Energy Technology Data Exchange (ETDEWEB)

Chambon, R., E-mail: richard-pierre.chambon@polymtl.ca; Hébert, A., E-mail: alain.hebert@polymtl.ca

2015-08-15

In order to better optimize the fuel energy efficiency in PWRs, the burnup distribution has to be known as accurately as possible, ideally in each pin. However, this level of detail is lost when core calculations are performed with homogenized cross-sections. The pin power reconstruction (PPR) method can be used to get back those levels of details as accurately as possible in a small additional computing time frame compared to classical core calculations. Such a de-homogenization technique for core calculations using arbitrarily homogenized fuel assembly geometries was presented originally by Fliscounakis et al. In our work, the same methodology was implemented in the open-source neutronic codes DRAGON5 and DONJON5. The new type of Selengut homogenization, called macro-calculation water gap, also proposed by Fliscounakis et al. was implemented. Some important details on the methodology were emphasized in order to get precise results. Validation tests were performed on 12 configurations of 3×3 clusters where simulations in transport theory and in diffusion theory followed by pin-power reconstruction were compared. The results shows that the pin power reconstruction and the Selengut macro-calculation water gap methods were correctly implemented. The accuracy of the simulations depends on the SPH method and on the homogenization geometry choices. Results show that the heterogeneous homogenization is highly recommended. SPH techniques were investigated with flux-volume and Selengut normalization, but the former leads to inaccurate results. Even though the new Selengut macro-calculation water gap method gives promising results regarding flux continuity at assembly interfaces, the classical Selengut approach is more reliable in terms of maximum and average errors in the whole range of configurations.

Relaxation approximations to second-order traffic flow models by high-resolution schemes

International Nuclear Information System (INIS)

Nikolos, I.K.; Delis, A.I.; Papageorgiou, M.

2015-01-01

A relaxation-type approximation of second-order non-equilibrium traffic models, written in conservation or balance law form, is considered. Using the relaxation approximation, the nonlinear equations are transformed to a semi-linear diagonilizable problem with linear characteristic variables and stiff source terms with the attractive feature that neither Riemann solvers nor characteristic decompositions are in need. In particular, it is only necessary to provide the flux and source term functions and an estimate of the characteristic speeds. To discretize the resulting relaxation system, high-resolution reconstructions in space are considered. Emphasis is given on a fifth-order WENO scheme and its performance. The computations reported demonstrate the simplicity and versatility of relaxation schemes as numerical solvers

Accurate signal reconstruction for higher order Lagrangian–Eulerian back-coupling in multiphase turbulence

Energy Technology Data Exchange (ETDEWEB)

Zwick, D; Balachandar, S [Department of Mechanical and Aerospace Engineering, University of Florida, FL, United States of America (United States); Sakhaee, E; Entezari, A, E-mail: dpzwick@ufl.edu [Department of Computer and Information Science and Engineering, University of Florida, FL, United States of America (United States)

2017-10-15

Multiphase flow simulation serves a vital purpose in applications as diverse as engineering design, natural disaster prediction, and even study of astrophysical phenomena. In these scenarios, it can be very difficult, expensive, or even impossible to fully represent the physical system under consideration. Even still, many such real-world applications can be modeled as a two-phase flow containing both continuous and dispersed phases. Consequentially, the continuous phase is thought of as a fluid and the dispersed phase as particles. The continuous phase is typically treated in the Eulerian frame of reference and represented on a fixed grid, while the dispersed phase is treated in the Lagrangian frame and represented by a sample distribution of Lagrangian particles that approximate a cloud. Coupling between the phases requires interpolation of the continuous phase properties at the locations of the Lagrangian particles. This interpolation step is straightforward and can be performed at higher order accuracy. The reverse process of projecting the Lagrangian particle properties from the sample points to the Eulerian grid is complicated by the time-dependent non-uniform distribution of the Lagrangian particles. In this paper we numerically examine three reconstruction, or projection, methods: (i) direct summation (DS), (ii) least-squares, and (iii) sparse approximation. We choose a continuous representation of the dispersed phase property that is systematically varied from a simple single mode periodic signal to a more complex artificially constructed turbulent signal to see how each method performs in reconstruction. In these experiments, we show that there is a link between the number of dispersed Lagrangian sample points and the number of structured grid points to accurately represent the underlying functional representation to machine accuracy. The least-squares method outperforms the other methods in most cases, while the sparse approximation method is able to

The Grad-Shafranov Reconstruction of Toroidal Magnetic Flux Ropes: Method Development and Benchmark Studies

Science.gov (United States)

Hu, Qiang

2017-09-01

We develop an approach of the Grad-Shafranov (GS) reconstruction for toroidal structures in space plasmas, based on in situ spacecraft measurements. The underlying theory is the GS equation that describes two-dimensional magnetohydrostatic equilibrium, as widely applied in fusion plasmas. The geometry is such that the arbitrary cross-section of the torus has rotational symmetry about the rotation axis, Z, with a major radius, r0. The magnetic field configuration is thus determined by a scalar flux function, Ψ, and a functional F that is a single-variable function of Ψ. The algorithm is implemented through a two-step approach: i) a trial-and-error process by minimizing the residue of the functional F(Ψ) to determine an optimal Z-axis orientation, and ii) for the chosen Z, a χ2 minimization process resulting in a range of r0. Benchmark studies of known analytic solutions to the toroidal GS equation with noise additions are presented to illustrate the two-step procedure and to demonstrate the performance of the numerical GS solver, separately. For the cases presented, the errors in Z and r0 are 9° and 22%, respectively, and the relative percent error in the numerical GS solutions is smaller than 10%. We also make public the computer codes for these implementations and benchmark studies.

A New Method for Coronal Magnetic Field Reconstruction

Science.gov (United States)

Yi, Sibaek; Choe, Gwang-Son; Cho, Kyung-Suk; Kim, Kap-Sung

2017-08-01

A precise way of coronal magnetic field reconstruction (extrapolation) is an indispensable tool for understanding of various solar activities. A variety of reconstruction codes have been developed so far and are available to researchers nowadays, but they more or less bear this and that shortcoming. In this paper, a new efficient method for coronal magnetic field reconstruction is presented. The method imposes only the normal components of magnetic field and current density at the bottom boundary to avoid the overspecification of the reconstruction problem, and employs vector potentials to guarantee the divergence-freeness. In our method, the normal component of current density is imposed, not by adjusting the tangential components of A, but by adjusting its normal component. This allows us to avoid a possible numerical instability that on and off arises in codes using A. In real reconstruction problems, the information for the lateral and top boundaries is absent. The arbitrariness of the boundary conditions imposed there as well as various preprocessing brings about the diversity of resulting solutions. We impose the source surface condition at the top boundary to accommodate flux imbalance, which always shows up in magnetograms. To enhance the convergence rate, we equip our code with a gradient-method type accelerator. Our code is tested on two analytical force-free solutions. When the solution is given only at the bottom boundary, our result surpasses competitors in most figures of merits devised by Schrijver et al. (2006). We have also applied our code to a real active region NOAA 11974, in which two M-class flares and a halo CME took place. The EUV observation shows a sudden appearance of an erupting loop before the first flare. Our numerical solutions show that two entwining flux tubes exist before the flare and their shackling is released after the CME with one of them opened up. We suggest that the erupting loop is created by magnetic reconnection between

A semi-experimental nodal synthesis method for the on-line reconstruction of three-dimensional neutron flux-shapes and reactivity. Final report

Energy Technology Data Exchange (ETDEWEB)

Jacqmin, Robert P. [Massachusetts Inst. of Technology (MIT), Cambridge, MA (United States)

1991-12-10

The safety and optimal performance of large, commercial, light-water reactors require the knowledge at all time of the neutron-flux distribution in the core. In principle, this information can be obtained by solving the time-dependent neutron diffusion equations. However, this approach is complicated and very expensive. Sufficiently accurate, real-time calculations (time scale of approximately one second) are not yet possible on desktop computers, even with fast-running, nodal kinetics codes. A semi-experimental, nodal synthesis method which avoids the solution of the time-dependent, neutron diffusion equations is described. The essential idea of this method is to approximate instantaneous nodal group-fluxes by a linear combination of K, precomputed, three-dimensional, static expansion-functions. The time-dependent coefficients of the combination are found from the requirement that the reconstructed flux-distribution agree in a least-squares sense with the readings of J (≥K) fixed, prompt-responding neutron-detectors. Possible numerical difficulties with the least-squares solution of the ill-conditioned, J-by-K system of equations are brought under complete control by the use of a singular-value-decomposition technique. This procedure amounts to the rearrangement of the original, linear combination of K expansion functions into an equivalent more convenient, linear combination of R (≤K) orthogonalized ``modes`` of decreasing magnitude. Exceedingly small modes are zeroed to eliminate any risk of roundoff-error amplification, and to assure consistency with the limited accuracy of the data. Additional modes are zeroed when it is desirable to limit the sensitivity of the results to measurement noise.

A high-order relativistic two-fluid electrodynamic scheme with consistent reconstruction of electromagnetic fields and a multidimensional Riemann solver for electromagnetism

International Nuclear Information System (INIS)

Balsara, Dinshaw S.; Amano, Takanobu; Garain, Sudip; Kim, Jinho

2016-01-01

always divergence-free. This collocation also ensures that electromagnetic radiation that is propagating in a vacuum has both electric and magnetic fields that are exactly divergence-free. Coupled relativistic fluid dynamic equations are solved for the positively and negatively charged fluids. The fluids' numerical fluxes also provide a self-consistent current density for the update of the electric field. Our reconstruction strategy ensures that fluid velocities always remain sub-luminal. Our third innovation consists of an efficient design for several popular IMEX schemes so that they provide strong coupling between the finite-volume-based fluid solver and the electromagnetic fields at high order. This innovation makes it possible to efficiently utilize high order IMEX time update methods for stiff source terms in the update of high order finite-volume methods for hyperbolic conservation laws. We also show that this very general innovation should extend seamlessly to Runge–Kutta discontinuous Galerkin methods. The IMEX schemes enable us to use large CFL numbers even in the presence of stiff source terms. Several accuracy analyses are presented showing that our method meets its design accuracy in the MHD limit as well as in the limit of electromagnetic wave propagation. Several stringent test problems are also presented. We also present a relativistic version of the GEM problem, which shows that our algorithm can successfully adapt to challenging problems in high energy astrophysics.

A high-order relativistic two-fluid electrodynamic scheme with consistent reconstruction of electromagnetic fields and a multidimensional Riemann solver for electromagnetism

Energy Technology Data Exchange (ETDEWEB)

Balsara, Dinshaw S., E-mail: dbalsara@nd.edu [Physics Department, University of Notre Dame (United States); Amano, Takanobu, E-mail: amano@eps.s.u-tokyo.ac.jp [Department of Earth and Planetary Science, University of Tokyo, Tokyo 113-0033 (Japan); Garain, Sudip, E-mail: sgarain@nd.edu [Physics Department, University of Notre Dame (United States); Kim, Jinho, E-mail: jkim46@nd.edu [Physics Department, University of Notre Dame (United States)

2016-08-01

always divergence-free. This collocation also ensures that electromagnetic radiation that is propagating in a vacuum has both electric and magnetic fields that are exactly divergence-free. Coupled relativistic fluid dynamic equations are solved for the positively and negatively charged fluids. The fluids' numerical fluxes also provide a self-consistent current density for the update of the electric field. Our reconstruction strategy ensures that fluid velocities always remain sub-luminal. Our third innovation consists of an efficient design for several popular IMEX schemes so that they provide strong coupling between the finite-volume-based fluid solver and the electromagnetic fields at high order. This innovation makes it possible to efficiently utilize high order IMEX time update methods for stiff source terms in the update of high order finite-volume methods for hyperbolic conservation laws. We also show that this very general innovation should extend seamlessly to Runge–Kutta discontinuous Galerkin methods. The IMEX schemes enable us to use large CFL numbers even in the presence of stiff source terms. Several accuracy analyses are presented showing that our method meets its design accuracy in the MHD limit as well as in the limit of electromagnetic wave propagation. Several stringent test problems are also presented. We also present a relativistic version of the GEM problem, which shows that our algorithm can successfully adapt to challenging problems in high energy astrophysics.

Asymptotically and exactly energy balanced augmented flux-ADER schemes with application to hyperbolic conservation laws with geometric source terms

Science.gov (United States)

Navas-Montilla, A.; Murillo, J.

2016-07-01

In this work, an arbitrary order HLL-type numerical scheme is constructed using the flux-ADER methodology. The proposed scheme is based on an augmented Derivative Riemann solver that was used for the first time in Navas-Montilla and Murillo (2015) [1]. Such solver, hereafter referred to as Flux-Source (FS) solver, was conceived as a high order extension of the augmented Roe solver and led to the generation of a novel numerical scheme called AR-ADER scheme. Here, we provide a general definition of the FS solver independently of the Riemann solver used in it. Moreover, a simplified version of the solver, referred to as Linearized-Flux-Source (LFS) solver, is presented. This novel version of the FS solver allows to compute the solution without requiring reconstruction of derivatives of the fluxes, nevertheless some drawbacks are evidenced. In contrast to other previously defined Derivative Riemann solvers, the proposed FS and LFS solvers take into account the presence of the source term in the resolution of the Derivative Riemann Problem (DRP), which is of particular interest when dealing with geometric source terms. When applied to the shallow water equations, the proposed HLLS-ADER and AR-ADER schemes can be constructed to fulfill the exactly well-balanced property, showing that an arbitrary quadrature of the integral of the source inside the cell does not ensure energy balanced solutions. As a result of this work, energy balanced flux-ADER schemes that provide the exact solution for steady cases and that converge to the exact solution with arbitrary order for transient cases are constructed.

Reconstructing dust fluxes and paleoproductivity at the southern Agulhas Plateau since MIS-6

Science.gov (United States)

Frenkel, M. M.; Anderson, R. F.; Winckler, G.

2017-12-01

Understanding the mechanisms underlying glacial-interglacial cycles requires characterizing the role of oceanic feedbacks in climatic changes. For example, increased aeolian iron fluxes to Fe-limited regions of the ocean and corresponding changes in marine productivity could have improved biological pump efficiency and resulted in CO2 drawdown. Here we explore these feedbacks using marine sediment core MDO2-2588 collected from the southern Agulhas Plateau (SAP; 41°S, 26°E), located beneath the modern subtropical front. Today, diatom productivity in this region is Si-limited because high Si utilization south of the polar front (PF) means that water advected northward to our study site is Si-depleted. However, previous work has suggested that extended sea ice cover during glacial periods may have limited diatom productivity south of the PF while frontal systems shifted northward, allowing more Si to reach thermocline of the SAP. Meanwhile, increased glacial dust flux to the SAP may have simultaneously supplied more Fe, contributing to higher glacial productivity. This hypothesis has been supported by observations of higher LGM and MIS-6 productivity at MD02-2588 using bulk biogenic content and diatom assemblages (Romero et al., Paleoceanography, 30 (2015) 118-132). Gradients in d13C between benthic and planktic foraminifera have also been used to support Fe fertilization at this site on millennial timescales (Ziegler et al., Nature Geoscience, 6 (2013) 457-461). Yet, studies have yet to produce coordinated records of dust flux and export production for the SAP. Here, we present records of dust, based on 230Th-normalized 232Th fluxes, and export production using 230Th-normalized excess-Ba and opal fluxes and authigenic U through MIS-6. Preliminary results show that lithogenic fluxes to MD02-2588 were approximately twice as high during MIS-6 as MIS-5e and were concurrent with a two-fold increase in excess-Ba flux. However, this relative increase in lithogenic flux

Regional absolute conductivity reconstruction using projected current density in MREIT

International Nuclear Information System (INIS)

Sajib, Saurav Z K; Kim, Hyung Joong; Woo, Eung Je; Kwon, Oh In

2012-01-01

Magnetic resonance electrical impedance tomography (MREIT) is a non-invasive technique for imaging the internal conductivity distribution in tissue within an MRI scanner, utilizing the magnetic flux density, which is introduced when a current is injected into the tissue from external electrodes. This magnetic flux alters the MRI signal, so that appropriate reconstruction can provide a map of the additional z-component of the magnetic field (B z ) as well as the internal current density distribution that created it. To extract the internal electrical properties of the subject, including the conductivity and/or the current density distribution, MREIT techniques use the relationship between the external injection current and the z-component of the magnetic flux density B = (B x , B y , B z ). The tissue studied typically contains defective regions, regions with a low MRI signal and/or low MRI signal-to-noise-ratio, due to the low density of nuclear magnetic resonance spins, short T 2 or T* 2 relaxation times, as well as regions with very low electrical conductivity, through which very little current traverses. These defective regions provide noisy B z data, which can severely degrade the overall reconstructed conductivity distribution. Injecting two independent currents through surface electrodes, this paper proposes a new direct method to reconstruct a regional absolute isotropic conductivity distribution in a region of interest (ROI) while avoiding the defective regions. First, the proposed method reconstructs the contrast of conductivity using the transversal J-substitution algorithm, which blocks the propagation of severe accumulated noise from the defective region to the ROI. Second, the proposed method reconstructs the regional projected current density using the relationships between the internal current density, which stems from a current injection on the surface, and the measured B z data. Combining the contrast conductivity distribution in the entire imaging

Reconstruction and measurement of cosmogenic signals in the neutrino experiment Borexino

Energy Technology Data Exchange (ETDEWEB)

Meindl, Johannes Quirin

2013-06-14

Underground laboratories around the globe provide low-count rate experiments with the necessary shielding against the large flux of cosmic muons present at the Earth's surface. Depending on the depth of the underground site, the muon flux is reduced by up to eight orders of magnitude. Hower, the residual muons, and the neutrons and radioisotopes they produce in nuclear spallation processes, still pose a significant background for many of these experiments. This thesis focusses on cosmogenic background signals in the neutrino experiment Borexino, which is located at the Laboratori Nazionali del Gran Sasso underground site at a depth of 3800 meters of water equivalent. The work encompasses the identification, spatial reconstruction, and measurement of rates and production yields of these cosmogenic events. For the efficient tagging of long-lived cosmogenic radioisotopes of lifetimes in the order of seconds and longer, the spatial reconstruction of the parent muon is essential. Based on the characteristic light emission profile of muons crossing the inner detector of Borexino, a new muon track reconstruction algorithm was developed. Furthermore, to increase the performance of the existing muon track reconstruction of Borexino's outer detector, a routine was programmed to automatically calibrate the photomultiplier tubes in timing and charge response. Muons entering the experiment can cause fast secondary signals from decays and captures of stopped muons, and the captures of muon-induced neutrons. To identify these events in the high noise environment after the muon, dedicated search algorithms were developed. Based on the detected signals, these fast muon-correlated events are studied. The fraction and lifetime of stopped muons are found to be in agreement with expectations. The production yield of cosmogenic neutrons is measured to (3.10{+-}0.07{sub stat}{+-}0.08{sub syst}) . 10{sup -4} n/({mu} . (g/cm{sup 2})). The corresponding capture time in the

A simple smoothness indicator for the WENO scheme with adaptive order

Science.gov (United States)

Huang, Cong; Chen, Li Li

2018-01-01

The fifth order WENO scheme with adaptive order is competent for solving hyperbolic conservation laws, its reconstruction is a convex combination of a fifth order linear reconstruction and three third order linear reconstructions. Note that, on uniform mesh, the computational cost of smoothness indicator for fifth order linear reconstruction is comparable with the sum of ones for three third order linear reconstructions, thus it is too heavy; on non-uniform mesh, the explicit form of smoothness indicator for fifth order linear reconstruction is difficult to be obtained, and its computational cost is much heavier than the one on uniform mesh. In order to overcome these problems, a simple smoothness indicator for fifth order linear reconstruction is proposed in this paper.

REGEN: Ancestral Genome Reconstruction for Bacteria.

Science.gov (United States)

Yang, Kuan; Heath, Lenwood S; Setubal, João C

2012-07-18

Ancestral genome reconstruction can be understood as a phylogenetic study with more details than a traditional phylogenetic tree reconstruction. We present a new computational system called REGEN for ancestral bacterial genome reconstruction at both the gene and replicon levels. REGEN reconstructs gene content, contiguous gene runs, and replicon structure for each ancestral genome. Along each branch of the phylogenetic tree, REGEN infers evolutionary events, including gene creation and deletion and replicon fission and fusion. The reconstruction can be performed by either a maximum parsimony or a maximum likelihood method. Gene content reconstruction is based on the concept of neighboring gene pairs. REGEN was designed to be used with any set of genomes that are sufficiently related, which will usually be the case for bacteria within the same taxonomic order. We evaluated REGEN using simulated genomes and genomes in the Rhizobiales order.

Using bioconductor package BiGGR for metabolic flux estimation based on gene expression changes in brain.

NARCIS (Netherlands)

Gavai, Anand K.; Supandi, Farahaniza; Hettling, Hannes; Murell, Paul; Leunissen, Jack A.M.; van Beek, Johannes H.G.M.

2015-01-01

Predicting the distribution of metabolic fluxes in biochemical networks is of major interest in systems biology. Several databases provide metabolic reconstructions for different organisms. Software to analyze flux distributions exists, among others for the proprietary MATLAB environment. Given the

Using bioconductor package BiGGR for metabolic flux estimation based on gene expression changes in brain

NARCIS (Netherlands)

Gavai, A.K.; Supandi, F.; Hettling, H.; Murrell, P.; Leunissen, J.A.M.; Beek, van J.H.G.M.

2015-01-01

Predicting the distribution of metabolic fluxes in biochemical networks is of major interest in systems biology. Several databases provide metabolic reconstructions for different organisms. Software to analyze flux distributions exists, among others for the proprietary MATLAB environment. Given the

Real-time diamagnetic flux measurements on ASDEX Upgrade.

Science.gov (United States)

Giannone, L; Geiger, B; Bilato, R; Maraschek, M; Odstrčil, T; Fischer, R; Fuchs, J C; McCarthy, P J; Mertens, V; Schuhbeck, K H

2016-05-01

Real-time diamagnetic flux measurements are now available on ASDEX Upgrade. In contrast to the majority of diamagnetic flux measurements on other tokamaks, no analog summation of signals is necessary for measuring the change in toroidal flux or for removing contributions arising from unwanted coupling to the plasma and poloidal field coil currents. To achieve the highest possible sensitivity, the diamagnetic measurement and compensation coil integrators are triggered shortly before plasma initiation when the toroidal field coil current is close to its maximum. In this way, the integration time can be chosen to measure only the small changes in flux due to the presence of plasma. Two identical plasma discharges with positive and negative magnetic field have shown that the alignment error with respect to the plasma current is negligible. The measured diamagnetic flux is compared to that predicted by TRANSP simulations. The poloidal beta inferred from the diamagnetic flux measurement is compared to the values calculated from magnetic equilibrium reconstruction codes. The diamagnetic flux measurement and TRANSP simulation can be used together to estimate the coupled power in discharges with dominant ion cyclotron resonance heating.

REGEN: Ancestral Genome Reconstruction for Bacteria

Directory of Open Access Journals (Sweden)

João C. Setubal

2012-07-01

Full Text Available Ancestral genome reconstruction can be understood as a phylogenetic study with more details than a traditional phylogenetic tree reconstruction. We present a new computational system called REGEN for ancestral bacterial genome reconstruction at both the gene and replicon levels. REGEN reconstructs gene content, contiguous gene runs, and replicon structure for each ancestral genome. Along each branch of the phylogenetic tree, REGEN infers evolutionary events, including gene creation and deletion and replicon fission and fusion. The reconstruction can be performed by either a maximum parsimony or a maximum likelihood method. Gene content reconstruction is based on the concept of neighboring gene pairs. REGEN was designed to be used with any set of genomes that are sufficiently related, which will usually be the case for bacteria within the same taxonomic order. We evaluated REGEN using simulated genomes and genomes in the Rhizobiales order.

High heat flux cooling for accelerator targets

International Nuclear Information System (INIS)

Silverman, I.; Nagler, A.

2002-01-01

Accelerator targets, both for radioisotope production and for high neutron flux sources generate very high thermal power in the target material which absorbs the particles beam. Generally, the geometric size of the targets is very small and the power density is high. The design of these targets requires dealing with very high heat fluxes and very efficient heat removal techniques in order to preserve the integrity of the target. Normal heat fluxes from these targets are in the order of 1 kw/cm 2 and may reach levels of an order of magnitude higher

Three-dimensional ICT reconstruction

International Nuclear Information System (INIS)

Zhang Aidong; Li Ju; Chen Fa; Sun Lingxia

2004-01-01

The three-dimensional ICT reconstruction method is the hot topic of recent ICT technology research. In the context qualified visual three-dimensional ICT pictures are achieved through multi-piece two-dimensional images accumulation by order, combining with thresholding method and linear interpolation. Different direction and different position images of the reconstructed pictures are got by rotation and interception respectively. The convenient and quick method is significantly instructive to more complicated three-dimensional reconstruction of ICT images. (authors)

Establishing Base Elements of Perspective in Order to Reconstruct Architectural Buildings from Photographs

Science.gov (United States)

Dzwierzynska, Jolanta

2017-12-01

The use of perspective images, especially historical photographs for retrieving information about presented architectural environment is a fast developing field recently. The photography image is a perspective image with secure geometrical connection with reality, therefore it is possible to reverse this process. The aim of the herby study is establishing requirements which a photographic perspective representation should meet for a reconstruction purpose, as well as determination of base elements of perspective such as a horizon line and a circle of depth, which is a key issue in any reconstruction. The starting point in the reconstruction process is geometrical analysis of the photograph, especially determination of the kind of perspective projection applied, which is defined by the building location towards a projection plane. Next, proper constructions can be used. The paper addresses the problem of establishing base elements of perspective on the basis of the photograph image in the case when camera calibration is impossible to establish. It presents different geometric construction methods selected dependently on the starting assumptions. Therefore, the methods described in the paper seem to be universal. Moreover, they can be used even in the case of poor quality photographs with poor perspective geometry. Such constructions can be realized with computer aid when the photographs are in digital form as it is presented in the paper. The accuracy of the applied methods depends on the photography image accuracy, as well as drawing accuracy, however, it is sufficient for further reconstruction. Establishing base elements of perspective presented in the paper is especially useful in difficult cases of reconstruction, when one lacks information about reconstructed architectural form and it is necessary to lean on solid geometry.

Real time equilibrium reconstruction for tokamak discharge control

International Nuclear Information System (INIS)

Ferron, J.R.; Walker, M.L.; Lao, L.L.; St John, H.E.; Humphreys, D.A.; Leuer, J.A.

1998-01-01

A practical method for performing a tokamak equilibrium reconstruction in real time for arbitrary time varying discharge shapes and current profiles is described. An approximate solution to the Grad-Shafranov equilibrium relation is found which best fits the diagnostic measurements. Thus, a solution for the spatial distribution of poloidal flux and toroidal current density is available in real time that is consistent with plasma force balance, allowing accurate evaluation of parameters such as discharge shape and safety factor profile. The equilibrium solutions are produced at a rate sufficient for discharge control. This equilibrium reconstruction algorithm has been implemented on the digital plasma control system for the DIII-D tokamak. The first application of real time equilibrium reconstruction to discharge shape control is described. (author)

A method for prompt calculation of neutron flux from measured SPND [self-powered neutron detectors] currents

International Nuclear Information System (INIS)

Kulacsy, K.; Lux, I.

1997-01-01

A new, approximate method is given to calculate the in-core flux from the current of SPNDs, with a delay of only a few seconds. The stability of this stepwise algorithm is proven to be satisfactory, and the results of tests performed both on synthetic and on real data are presented. The reconstructed flux is found to follow both steady state and transient fluxes well. (author)

Denoised ordered subset statistically penalized algebraic reconstruction technique (DOS-SPART) in digital breast tomosynthesis

Science.gov (United States)

Garrett, John; Li, Yinsheng; Li, Ke; Chen, Guang-Hong

2017-03-01

Digital breast tomosynthesis (DBT) is a three dimensional (3D) breast imaging modality in which projections are acquired over a limited angular span around the compressed breast and reconstructed into image slices parallel to the detector. DBT has been shown to help alleviate the breast tissue overlapping issues of two dimensional (2D) mammography. Since the overlapping tissues may simulate cancer masses or obscure true cancers, this improvement is critically important for improved breast cancer screening and diagnosis. In this work, a model-based image reconstruction method is presented to show that spatial resolution in DBT volumes can be maintained while dose is reduced using the presented method when compared to that of a state-of-the-art commercial reconstruction technique. Spatial resolution was measured in phantom images and subjectively in a clinical dataset. Noise characteristics were explored in a cadaver study. In both the quantitative and subjective results the image sharpness was maintained and overall image quality was maintained at reduced doses when the model-based iterative reconstruction was used to reconstruct the volumes.

Statistical mechanics of flux lines in high-temperature superconductors

International Nuclear Information System (INIS)

Dasgupta, C.

1992-01-01

The shortness of the low temperature coherence lengths of high T c materials leads to new mechanisms of pinning of flux lines. Lattice periodic modulations of the order parameters itself acts to pin vortex lines in regions of the unit cell were the order parameter is small. A presentation of flux creep and flux noise at low temperature and magnetic fields in terms of motion of simple metastable defects on flux lines is made, with a calculation of flux lattice melting. 12 refs

Implementation and evaluation of an ordered subsets reconstruction algorithm for transmission PET studies using median root prior and inter-update median filtering

International Nuclear Information System (INIS)

Bettinardi, V.; Gilardi, M.C.; Fazio, F.; Alenius, S.; Ruotsalainen, U.; Numminen, P.; Teraes, M.

2003-01-01

An ordered subsets (OS) reconstruction algorithm based on the median root prior (MRP) and inter-update median filtering was implemented for the reconstruction of low count statistics transmission (TR) scans. The OS-MRP-TR algorithm was evaluated using an experimental phantom, simulating positron emission tomography (PET) whole-body (WB) studies, as well as patient data. Various experimental conditions, in terms of TR scan time (from 1 h to 1 min), covering a wide range of TR count statistics were evaluated. The performance of the algorithm was assessed by comparing the mean value of the attenuation coefficient (MVAC) of known tissue types and the coefficient of variation (CV) for low-count TR images, reconstructed with the OS-MRP-TR algorithm, with reference values obtained from high-count TR images reconstructed with a filtered back-projection (FBP) algorithm. The reconstructed OS-MRP-TR images were then used for attenuation correction of the corresponding emission (EM) data. EM images reconstructed with attenuation correction generated by OS-MRP-TR images, of low count statistics, were compared with the EM images corrected for attenuation using reference (high statistics) TR data. In all the experimental situations considered, the OS-MRP-TR algorithm showed: (1) a tendency towards a stable solution in terms of MVAC; (2) a difference in the MVAC of within 5% for a TR scan of 1 min reconstructed with the OS-MRP-TR and a TR scan of 1 h reconstructed with the FBP algorithm; (3) effectiveness in noise reduction, particularly for low count statistics data [using a specific parameter configuration the TR images reconstructed with OS-MRP-TR(1 min) had a lower CV than the corresponding TR images of a 1-h scan reconstructed with the FBP algorithm]; (4) a difference of within 3% between the mean counts in the EM images attenuation corrected using the OS-MRP-TR images of 1 min and the mean counts in the EM images attenuation corrected using the OS-MRP-TR images of 1 h; (5

Reconstruction and in silico analysis of metabolic network for an oleaginous yeast, Yarrowia lipolytica.

Directory of Open Access Journals (Sweden)

Pengcheng Pan

Full Text Available With the emergence of energy scarcity, the use of renewable energy sources such as biodiesel is becoming increasingly necessary. Recently, many researchers have focused their minds on Yarrowia lipolytica, a model oleaginous yeast, which can be employed to accumulate large amounts of lipids that could be further converted to biodiesel. In order to understand the metabolic characteristics of Y. lipolytica at a systems level and to examine the potential for enhanced lipid production, a genome-scale compartmentalized metabolic network was reconstructed based on a combination of genome annotation and the detailed biochemical knowledge from multiple databases such as KEGG, ENZYME and BIGG. The information about protein and reaction associations of all the organisms in KEGG and Expasy-ENZYME database was arranged into an EXCEL file that can then be regarded as a new useful database to generate other reconstructions. The generated model iYL619_PCP accounts for 619 genes, 843 metabolites and 1,142 reactions including 236 transport reactions, 125 exchange reactions and 13 spontaneous reactions. The in silico model successfully predicted the minimal media and the growing abilities on different substrates. With flux balance analysis, single gene knockouts were also simulated to predict the essential genes and partially essential genes. In addition, flux variability analysis was applied to design new mutant strains that will redirect fluxes through the network and may enhance the production of lipid. This genome-scale metabolic model of Y. lipolytica can facilitate system-level metabolic analysis as well as strain development for improving the production of biodiesels and other valuable products by Y. lipolytica and other closely related oleaginous yeasts.

Order reconstruction phenomena and temperature-driven dynamics in a 3D zenithally bistable device

KAUST Repository

Raisch, A.

2014-07-01

We model the zenithally bistable device (ZBD) in three dimensions (3D), within the Landau-de Gennes theory, and find three stable static states in 3D without an applied field: the vertically aligned nematic (VAN) state, the hybrid aligned nematic (HAN) state and a third, high-tilt state, which we call the THAN state, with an interior and a surface defect. We recover the order reconstruction (OR) phenomenon around the defects in the HAN and THAN states and the 3D THAN and HAN solutions exhibit stable biaxial cylinders connecting defects on opposite faces of the ZBD device. We demonstrate a two-way temperature-driven switching between high-tilt and low-tilt states through controlled heating and cooling procedures in two dimensions (2D), with no applied fields. © CopyrightEPLA, 2014.

Methods and applications in high flux neutron imaging

International Nuclear Information System (INIS)

Ballhausen, H.

2007-01-01

This treatise develops new methods for high flux neutron radiography and high flux neutron tomography and describes some of their applications in actual experiments. Instead of single images, time series can be acquired with short exposure times due to the available high intensity. To best use the increased amount of information, new estimators are proposed, which extract accurate results from the recorded ensembles, even if the individual piece of data is very noisy and in addition severely affected by systematic errors such as an influence of gamma background radiation. The spatial resolution of neutron radiographies, usually limited by beam divergence and inherent resolution of the scintillator, can be significantly increased by scanning the sample with a pinhole-micro-collimator. This technique circumvents any limitations in present detector design and, due to the available high intensity, could be successfully tested. Imaging with scattered neutrons as opposed to conventional total attenuation based imaging determines separately the absorption and scattering cross sections within the sample. For the first time even coherent angle dependent scattering could be visualized space-resolved. New applications of high flux neutron imaging are presented, such as materials engineering experiments on innovative metal joints, time-resolved tomography on multilayer stacks of fuel cells under operation, and others. A new implementation of an algorithm for the algebraic reconstruction of tomography data executes even in case of missing information, such as limited angle tomography, and returns quantitative reconstructions. The setup of the world-leading high flux radiography and tomography facility at the Institut Laue-Langevin is presented. A comprehensive appendix covers the physical and technical foundations of neutron imaging. (orig.)

Multi-linear sparse reconstruction for SAR imaging based on higher-order SVD

Science.gov (United States)

Gao, Yu-Fei; Gui, Guan; Cong, Xun-Chao; Yang, Yue; Zou, Yan-Bin; Wan, Qun

2017-12-01

This paper focuses on the spotlight synthetic aperture radar (SAR) imaging for point scattering targets based on tensor modeling. In a real-world scenario, scatterers usually distribute in the block sparse pattern. Such a distribution feature has been scarcely utilized by the previous studies of SAR imaging. Our work takes advantage of this structure property of the target scene, constructing a multi-linear sparse reconstruction algorithm for SAR imaging. The multi-linear block sparsity is introduced into higher-order singular value decomposition (SVD) with a dictionary constructing procedure by this research. The simulation experiments for ideal point targets show the robustness of the proposed algorithm to the noise and sidelobe disturbance which always influence the imaging quality of the conventional methods. The computational resources requirement is further investigated in this paper. As a consequence of the algorithm complexity analysis, the present method possesses the superiority on resource consumption compared with the classic matching pursuit method. The imaging implementations for practical measured data also demonstrate the effectiveness of the algorithm developed in this paper.

Accelerating an Ordered-Subset Low-Dose X-Ray Cone Beam Computed Tomography Image Reconstruction with a Power Factor and Total Variation Minimization.

Science.gov (United States)

Huang, Hsuan-Ming; Hsiao, Ing-Tsung

2016-01-01

In recent years, there has been increased interest in low-dose X-ray cone beam computed tomography (CBCT) in many fields, including dentistry, guided radiotherapy and small animal imaging. Despite reducing the radiation dose, low-dose CBCT has not gained widespread acceptance in routine clinical practice. In addition to performing more evaluation studies, developing a fast and high-quality reconstruction algorithm is required. In this work, we propose an iterative reconstruction method that accelerates ordered-subsets (OS) reconstruction using a power factor. Furthermore, we combine it with the total-variation (TV) minimization method. Both simulation and phantom studies were conducted to evaluate the performance of the proposed method. Results show that the proposed method can accelerate conventional OS methods, greatly increase the convergence speed in early iterations. Moreover, applying the TV minimization to the power acceleration scheme can further improve the image quality while preserving the fast convergence rate.

Exact Jacobians of Roe-type flux difference splitting of the equations of radiation hydrodynamics (and Euler equations) for use in time-implicit higher-order Godunov schemes

International Nuclear Information System (INIS)

Balsara, D.S.

1999-01-01

In this paper we analyze some of the numerical issues that are involved in making time-implicit higher-order Godunov schemes for the equations of radiation hydrodynamics (and the Euler or Navier-Stokes equations). This is done primarily with the intent of incorporating such methods in the author's RIEMANN code. After examining the issues it is shown that the construction of a time-implicit higher-order Godunov scheme for radiation hydrodynamics would be benefited by our ability to evaluate exact Jacobians of the numerical flux that is based on Roe-type flux difference splitting. In this paper we show that this can be done analytically in a form that is suitable for efficient computational implementation. It is also shown that when multiple fluid species are used or when multiple radiation frequencies are used the computational cost in the evaluation of the exact Jacobians scales linearly with the number of fluid species or the number of radiation frequencies. Connections are made to other types of numerical fluxes, especially those based on flux difference splittings. It is shown that the evaluation of the exact Jacobian for such numerical fluxes is also benefited by the present strategy and the results given here. It is, however, pointed out that time-implicit schemes that are based on the evaluation of the exact Jacobians for flux difference splittings using the methods developed here are both computationally more efficient and numerically more stable than corresponding time-implicit schemes that are based on the evaluation of the exact or approximate Jacobians for flux vector splittings. (Copyright (c) 1999 Elsevier Science B.V., Amsterdam. All rights reserved.)

Genome-scale reconstruction of the Streptococcus pyogenes M49 metabolic network reveals growth requirements and indicates potential drug targets.

Science.gov (United States)

Levering, Jennifer; Fiedler, Tomas; Sieg, Antje; van Grinsven, Koen W A; Hering, Silvio; Veith, Nadine; Olivier, Brett G; Klett, Lara; Hugenholtz, Jeroen; Teusink, Bas; Kreikemeyer, Bernd; Kummer, Ursula

2016-08-20

Genome-scale metabolic models comprise stoichiometric relations between metabolites, as well as associations between genes and metabolic reactions and facilitate the analysis of metabolism. We computationally reconstructed the metabolic network of the lactic acid bacterium Streptococcus pyogenes M49. Initially, we based the reconstruction on genome annotations and already existing and curated metabolic networks of Bacillus subtilis, Escherichia coli, Lactobacillus plantarum and Lactococcus lactis. This initial draft was manually curated with the final reconstruction accounting for 480 genes associated with 576 reactions and 558 metabolites. In order to constrain the model further, we performed growth experiments of wild type and arcA deletion strains of S. pyogenes M49 in a chemically defined medium and calculated nutrient uptake and production fluxes. We additionally performed amino acid auxotrophy experiments to test the consistency of the model. The established genome-scale model can be used to understand the growth requirements of the human pathogen S. pyogenes and define optimal and suboptimal conditions, but also to describe differences and similarities between S. pyogenes and related lactic acid bacteria such as L. lactis in order to find strategies to reduce the growth of the pathogen and propose drug targets. Copyright © 2016 Elsevier B.V. All rights reserved.

Characteristics of heat flux and particle flux to the divertor in H-mode of JT-60U

International Nuclear Information System (INIS)

Itami, K.; Hosogane, N.; Asakura, N.; Kubo, H.; Tsuji, S.; Shimada, M.

1995-01-01

Heat flux and particle flux behavior in H-mode is studied in a comparative manner. It was confirmed that the multiple peak structure of heat flux during ELM activity has a role in reducing the average value of a peak heat flux at the divertor. In order to characterize heat and particle flux during ELM activity, the ELM part and the steady state part of heat flux and particle flux were determined and statistically analyzed. A large in-out asymmetry of peak ELM heat flux density was found. The asymmetry is almost unaffected by the ion grad-B drift direction. In-out asymmetry of both ELM and steady-state parts of the particle flux were found to be similar. ((orig.))

Anisotropy of the Seebeck Coefficient in the Cuprate Superconductor YBa_{2}Cu_{3}O_{y}: Fermi-Surface Reconstruction by Bidirectional Charge Order

Directory of Open Access Journals (Sweden)

O. Cyr-Choinière

2017-09-01

Full Text Available The Seebeck coefficient S of the cuprate YBa_{2}Cu_{3}O_{y} is measured in magnetic fields large enough to suppress superconductivity, at hole dopings p=0.11 and p=0.12, for heat currents along the a and b directions of the orthorhombic crystal structure. For both directions, S/T decreases and becomes negative at low temperature, a signature that the Fermi surface undergoes a reconstruction due to broken translational symmetry. Above a clear threshold field, a strong new feature appears in S_{b}, for conduction along the b axis only. We attribute this feature to the onset of 3D-coherent unidirectional charge-density-wave modulations seen by x-ray diffraction, also along the b axis only. Because these modulations have a sharp onset temperature well below the temperature where S/T starts to drop towards negative values, we infer that they are not the cause of Fermi-surface reconstruction. Instead, the reconstruction must be caused by the quasi-2D bidirectional modulations that develop at significantly higher temperature. The unidirectional order only confers an additional anisotropy to the already reconstructed Fermi surface, also manifest as an in-plane anisotropy of the resistivity.

Estimate of the angular dimensions of objects and reconstruction of their shapes from the parameters of the fourth-order radiation correlation function

International Nuclear Information System (INIS)

Buryi, E V; Kosygin, A A

2004-01-01

It is shown that, when the angular resolution of a receiving optical system is insufficient, the angular dimensions of a located object can be estimated and its shape can be reconstructed by estimating the parameters of the fourth-order correlation function (CF) of scattered coherent radiation. The reliability of the estimates of CF counts obtained by the method of a discrete spatial convolution of the intensity-field counts, the possibility of estimating the CF profile counts by the method of one-dimensional convolution of intensity counts, and the applicability of the method for reconstructing the object shape are confirmed experimentally. (laser applications and other topics in quantum electronics)

Automated flux chamber for investigating gas flux at water-air interfaces.

Science.gov (United States)

Duc, Nguyen Thanh; Silverstein, Samuel; Lundmark, Lars; Reyier, Henrik; Crill, Patrick; Bastviken, David

2013-01-15

Aquatic ecosystems are major sources of greenhouse gases (GHG). Representative measurements of GHG fluxes from aquatic ecosystems to the atmosphere are vital for quantitative understanding of relationships between biogeochemistry and climate. Fluxes occur at high temporal variability at diel or longer scales, which are not captured by traditional short-term deployments (often in the order of 30 min) of floating flux chambers. High temporal frequency measurements are necessary but also extremely labor intensive if manual flux chamber based methods are used. Therefore, we designed an inexpensive and easily mobile automated flux chamber (AFC) for extended deployments. The AFC was designed to measure in situ accumulation of gas in the chamber and also to collect gas samples in an array of sample bottles for subsequent analysis in the laboratory, providing two independent ways of CH(4) concentration measurements. We here present the AFC design and function together with data from initial laboratory tests and from a field deployment.

Predicting supramolecular self-assembly on reconstructed metal surfaces

Science.gov (United States)

Roussel, Thomas J.; Barrena, Esther; Ocal, Carmen; Faraudo, Jordi

2014-06-01

The prediction of supramolecular self-assembly onto solid surfaces is still challenging in many situations of interest for nanoscience. In particular, no previous simulation approach has been capable to simulate large self-assembly patterns of organic molecules over reconstructed surfaces (which have periodicities over large distances) due to the large number of surface atoms and adsorbing molecules involved. Using a novel simulation technique, we report here large scale simulations of the self-assembly patterns of an organic molecule (DIP) over different reconstructions of the Au(111) surface. We show that on particular reconstructions, the molecule-molecule interactions are enhanced in a way that long-range order is promoted. Also, the presence of a distortion in a reconstructed surface pattern not only induces the presence of long-range order but also is able to drive the organization of DIP into two coexisting homochiral domains, in quantitative agreement with STM experiments. On the other hand, only short range order is obtained in other reconstructions of the Au(111) surface. The simulation strategy opens interesting perspectives to tune the supramolecular structure by simulation design and surface engineering if choosing the right molecular building blocks and stabilising the chosen reconstruction pattern.The prediction of supramolecular self-assembly onto solid surfaces is still challenging in many situations of interest for nanoscience. In particular, no previous simulation approach has been capable to simulate large self-assembly patterns of organic molecules over reconstructed surfaces (which have periodicities over large distances) due to the large number of surface atoms and adsorbing molecules involved. Using a novel simulation technique, we report here large scale simulations of the self-assembly patterns of an organic molecule (DIP) over different reconstructions of the Au(111) surface. We show that on particular reconstructions, the molecule

A Combined First and Second Order Variational Approach for Image Reconstruction

KAUST Repository

Papafitsoros, K.; Schö nlieb, C. B.

2013-01-01

the creation of undesirable artifacts and blocky-like structures in the reconstructed images-a known disadvantage of the ROF model-while being simple and efficiently numerically solvable. ©Springer Science+Business Media New York 2013.

Our Clinical Experience in Lower Eyelid Reconstruction and Comparison of Reconstruction Techniques.

Directory of Open Access Journals (Sweden)

Erol Kesiktas

2011-03-01

Full Text Available Lower eyelid reconstruction after tumor resection or trauma is extremely important in order to obtain the protection of the globe and it requires extra care. The aim of this study is to evaluate the techniques that we use in lower eyelid reconstruction. Between the years of 1999-2009, a total of 23 patients who had lower eyelid defects due to tumor resection (21 patients or trauma (2 patients were reconstructed by the use of various flaps. Eleven of the patients were women and twelve of them were men. Average age was 60.7. For the reconstruction 13 Mustarde flap, 9 bipedicled Tripier flap, 1 Tenzel flap and 1 bipedicled infraorbital flaps were used. Average postoperative follow up interval was 35 months. (18-47 months. Flap necrosis, function loss in the lower lid were not experienced in any of the patients. Cosmetically satisfactory results were obtained. In lower eyelid reconstruction, the size of the defect and the amount of skin around must be carefully evaluated and should be considered while planning the reconstruction. [Cukurova Med J 2011; 36(1: 15-23

Maximising information recovery from rank-order codes

Science.gov (United States)

Sen, B.; Furber, S.

2007-04-01

The central nervous system encodes information in sequences of asynchronously generated voltage spikes, but the precise details of this encoding are not well understood. Thorpe proposed rank-order codes as an explanation of the observed speed of information processing in the human visual system. The work described in this paper is inspired by the performance of SpikeNET, a biologically inspired neural architecture using rank-order codes for information processing, and is based on the retinal model developed by VanRullen and Thorpe. This model mimics retinal information processing by passing an input image through a bank of Difference of Gaussian (DoG) filters and then encoding the resulting coefficients in rank-order. To test the effectiveness of this encoding in capturing the information content of an image, the rank-order representation is decoded to reconstruct an image that can be compared with the original. The reconstruction uses a look-up table to infer the filter coefficients from their rank in the encoded image. Since the DoG filters are approximately orthogonal functions, they are treated as their own inverses in the reconstruction process. We obtained a quantitative measure of the perceptually important information retained in the reconstructed image relative to the original using a slightly modified version of an objective metric proposed by Petrovic. It is observed that around 75% of the perceptually important information is retained in the reconstruction. In the present work we reconstruct the input using a pseudo-inverse of the DoG filter-bank with the aim of improving the reconstruction and thereby extracting more information from the rank-order encoded stimulus. We observe that there is an increase of 10 - 15% in the information retrieved from a reconstructed stimulus as a result of inverting the filter-bank.

The AOLI Non-Linear Curvature Wavefront Sensor: High sensitivity reconstruction for low-order AO

Science.gov (United States)

Crass, Jonathan; King, David; Mackay, Craig

2013-12-01

Many adaptive optics (AO) systems in use today require bright reference objects to determine the effects of atmospheric distortions on incoming wavefronts. This requirement is because Shack Hartmann wavefront sensors (SHWFS) distribute incoming light from reference objects into a large number of sub-apertures. Bright natural reference objects occur infrequently across the sky leading to the use of laser guide stars which add complexity to wavefront measurement systems. The non-linear curvature wavefront sensor as described by Guyon et al. has been shown to offer a significant increase in sensitivity when compared to a SHWFS. This facilitates much greater sky coverage using natural guide stars alone. This paper describes the current status of the non-linear curvature wavefront sensor being developed as part of an adaptive optics system for the Adaptive Optics Lucky Imager (AOLI) project. The sensor comprises two photon-counting EMCCD detectors from E2V Technologies, recording intensity at four near-pupil planes. These images are used with a reconstruction algorithm to determine the phase correction to be applied by an ALPAO 241-element deformable mirror. The overall system is intended to provide low-order correction for a Lucky Imaging based multi CCD imaging camera. We present the current optical design of the instrument including methods to minimise inherent optical effects, principally chromaticity. Wavefront reconstruction methods are discussed and strategies for their optimisation to run at the required real-time speeds are introduced. Finally, we discuss laboratory work with a demonstrator setup of the system.

Temperature and heat flux changes at the base of Laurentide ice sheet inferred from geothermal data (evidence from province of Alberta, Canada)

Science.gov (United States)

Demezhko, Dmitry; Gornostaeva, Anastasia; Majorowicz, Jacek; Šafanda, Jan

2018-01-01

Using a previously published temperature log of the 2363-m-deep borehole Hunt well (Alberta, Canada) and the results of its previous interpretation, the new reconstructions of ground surface temperature and surface heat flux histories for the last 30 ka have been obtained. Two ways to adjust the timescale of geothermal reconstructions are discussed, namely the traditional method based on the a priori data on thermal diffusivity value, and the alternative one including the orbital tuning of the surface heat flux and the Earth's insolation changes. It is shown that the second approach provides better agreement between geothermal reconstructions and proxy evidences of deglaciation chronology in the studied region.

The Analytical Diffusion-Expansion Model for Forbush Decreases Caused by Flux Ropes

Science.gov (United States)

Dumbovic, M.; Temmer, M.

2017-12-01

Identification and tracking of interplanetary coronal mass ejections (ICMEs) throughout the heliosphere is a growingly important aspect of space weather research. One of the "signatures" of ICME passage is the corresponding Forbush decrease (FD), a short term decrease in the galactic cosmic ray flux. These depressions are observed at the surface of the Earth for over 50 years, by several spacecraft in interplanetary space in the past couple of decades, and recently also on Mars' surface with Curiosity rover. In order to use FDs as ICME signatures efficiently, it is important to model ICME interaction with energetic particles by taking into account ICME evolution and constraining the model with observational data. We present an analytical diffusion-expansion FD model ForbMod which is based on the widely used approach of the initially empty, closed magnetic structure (i.e. flux rope) which fills up slowly with particles by perpendicular diffusion. The model is restricted to explain only the depression caused by the magnetic structure of the ICME and not of the associated shock. We use remote CME observations and a 3D reconstruction method (the Graduated Cylindrical Shell method) to constrain initial and boundary conditions of the FD model and take into account CME evolutionary properties by incorporating flux rope expansion. Several options of flux rope expansion are regarded as the competing mechanism to diffusion which can lead to different FD characteristics. This project has received funding from the European Union's Horizon 2020 research and innovation programme under the Marie Skłodowska-Curie grant agreement No 745782.

Software applications for flux balance analysis.

Science.gov (United States)

Lakshmanan, Meiyappan; Koh, Geoffrey; Chung, Bevan K S; Lee, Dong-Yup

2014-01-01

Flux balance analysis (FBA) is a widely used computational method for characterizing and engineering intrinsic cellular metabolism. The increasing number of its successful applications and growing popularity are possibly attributable to the availability of specific software tools for FBA. Each tool has its unique features and limitations with respect to operational environment, user-interface and supported analysis algorithms. Presented herein is an in-depth evaluation of currently available FBA applications, focusing mainly on usability, functionality, graphical representation and inter-operability. Overall, most of the applications are able to perform basic features of model creation and FBA simulation. COBRA toolbox, OptFlux and FASIMU are versatile to support advanced in silico algorithms to identify environmental and genetic targets for strain design. SurreyFBA, WEbcoli, Acorn, FAME, GEMSiRV and MetaFluxNet are the distinct tools which provide the user friendly interfaces in model handling. In terms of software architecture, FBA-SimVis and OptFlux have the flexible environments as they enable the plug-in/add-on feature to aid prospective functional extensions. Notably, an increasing trend towards the implementation of more tailored e-services such as central model repository and assistance to collaborative efforts was observed among the web-based applications with the help of advanced web-technologies. Furthermore, most recent applications such as the Model SEED, FAME, MetaFlux and MicrobesFlux have even included several routines to facilitate the reconstruction of genome-scale metabolic models. Finally, a brief discussion on the future directions of FBA applications was made for the benefit of potential tool developers.

MO-FG-CAMPUS-IeP2-04: Multiple Penalties with Different Orders for Structure Adaptive CBCT Reconstruction

International Nuclear Information System (INIS)

Shi, Q; Cheng, P; Tan, S; Tan, S; Wang, J

2016-01-01

Purpose: To combine total variation (TV) and Hessian penalty in a structure adaptive way for cone-beam CT (CBCT) reconstruction. Methods: TV is a widely used first order penalty with good ability in suppressing noise and preserving edges but leads to the staircase effect in regions with smooth intensity transition. The second order Hessian penalty can effectively suppress the staircase effect with extra cost of blurring object edges. To take the best of both penalties we proposed a novel method to combine both for CBCT reconstruction in a structure adaptive way. The proposed method adaptively determined the weight of each penalty according to the geometry of local regions. An specially-designed exponent term with image gradient involved was used to characterize the local geometry such that the weights for Hessian and TV were 1 and 0 respectively at uniform local regions and 0 and 1 at edge regions. For other local regions the weights varied from 0 to 1. The objective functional was minimized using the majorzationminimization approach. We evaluated the proposed method on a modified 3D shepp-logan and a CatPhan 600 phantom. The full-width-at-halfmaximum (FWHM) and contrast-to-noise (CNR) were calculated. Results: For 3D shepp-logan the reconstructed images using TV had an obvious staircase effect while those using the proposed method and Hessian preserved the smooth transition regions well. FWHMs of the proposed method TV and Hessian penalty were 1.75 1.61 and 3.16 respectively, indicating that both TV and the proposed method is able to preserve edges. For CatPhan 600 CNR values of the proposed method were similar to those of TV and Hessian. Conclusion: The proposed method retains favorable properties of TV like preserving edges and also has the ability in better preserving gradual transition structure as Hessian does. All methods performs similarly in suppressing noise. This work was supported in part by National Natural Science Foundation of China (NNSFC) under

How large is the subducted water flux? New constraints on mantle regassing rates

Science.gov (United States)

Parai, R.; Mukhopadhyay, S.

2012-02-01

Estimates of the subducted water (H2O) flux have been used to discuss the regassing of the mantle over Earth history. However, these estimates vary widely, and some are large enough to have reduced the volume of water in the global ocean by a factor of two over the Phanerozoic. In light of uncertainties in the hydration state of subducting slabs, magma production rates and mantle source water contents, we use a Monte Carlo simulation to set limits on long-term global water cycling and the return flux of water to the deep Earth. Estimates of magma production rates and water contents in primary magmas generated at ocean islands, mid-ocean ridges, arcs and back-arcs are paired with estimates of water entering trenches via subducting oceanic slab in order to construct a model of the deep Earth water cycle. The simulation is constrained by reconstructions of Phanerozoic sea level change, which suggest that ocean volume is near steady-state, though a sea level decrease of up to 360 m may be supported. We provide limits on the return flux of water to the deep Earth over the Phanerozoic corresponding to a near steady-state exosphere (0-100 meter sea level decrease) and a maximum sea level decrease of 360 m. For the near steady-state exosphere, the return flux is 1.4 - 2.0- 0.3+ 0.4 × 1013 mol/yr, corresponding to 2-3% serpentinization in 10 km of lithospheric mantle. The return flux that generates the maximum sea level decrease over the Phanerozoic is 3.5- 0.3+ 0.4 × 1013 mol/yr, corresponding to 5% serpentinization in 10 km of lithospheric mantle. Our estimates of the return flux of water to the mantle are up to 7 times lower than previously suggested. The imbalance between our estimates of the return flux and mantle output flux leads to a low rate of increase in bulk mantle water content of up to 24 ppm/Ga.

A First-Order Primal-Dual Reconstruction Algorithm for Few-View SPECT

DEFF Research Database (Denmark)

Wolf, Paul; Jørgensen, Jakob Heide; Gilat-Schmidt, Taly

2012-01-01

A sparsity-exploiting algorithm intended for few-view Single Photon Emission Computed Tomography (SPECT) reconstruction is proposed and characterized. The algorithm models the object as piecewise constant subject to a blurring operation. Monte Carlo simulations were performed to provide more proj...

Edge-promoting reconstruction of absorption and diffusivity in optical tomography

DEFF Research Database (Denmark)

Hannukainen, A.; Harhanen, Lauri Oskari; Hyvönen, N.

2015-01-01

In optical tomography a physical body is illuminated with near-infrared light and the resulting outward photon flux is measured at the object boundary. The goal is to reconstruct internal optical properties of the body, such as absorption and diffusivity. In this work, it is assumed that the imaged...... measurement noise model. The method is based on iteratively combining a lagged diffusivity step and a linearization of the measurement model of diffuse optical tomography with priorconditioned LSQR. The performance of the reconstruction technique is tested via three-dimensional numerical experiments...

On the Reconstruction of the Convection Pattern Below an Active Region of Solar Corona

International Nuclear Information System (INIS)

Pirot, Dorian; Gaudet, Jonathan; Vincent, Alain

2012-01-01

In order to better understand magneto-convective patterns and flux emergence, we use the Nudging Back and Forth, a data assimilation method with an anelastic convection model to reconstruct the convection zone below a solar active region from observed solar surface magnetograms. To mimic photosphere, vector magnetograms are computed using force free hypothesis. We find that the observed arcade system of AR9077-20000714 ( t he slinky ) of magnetic lines is actually formed by Ω and U loops generated in the convection zone. We generate temperature maps at top of the convective zone and find that high magnetic fields on either sides of the neutral line produce a local cooling by impeding the overturning motions.

High order spatial expansion for the method of characteristics applied to 3-D geometries

International Nuclear Information System (INIS)

Naymeh, L.; Masiello, E.; Sanchez, R.

2013-01-01

The method of characteristics is an efficient and flexible technique to solve the neutron transport equation and has been extensively used in two-dimensional calculations because it permits to deal with complex geometries. However, because of a very fast increase in storage requirements and number of floating operations, its direct application to three-dimensional routine transport calculations it is not still possible. In this work we introduce and analyze several modifications aimed to reduce memory requirements and to diminish the computing burden. We explore high-order spatial approximation, the use of intermediary trajectory-dependent flux expansions and the possibility of dynamic trajectory reconstruction from local tracking for typed subdomains. (authors)

Evaluation of list-mode ordered subset expectation maximization image reconstruction for pixelated solid-state compton gamma camera with large number of channels

Science.gov (United States)

Kolstein, M.; De Lorenzo, G.; Chmeissani, M.

2014-04-01

The Voxel Imaging PET (VIP) Pathfinder project intends to show the advantages of using pixelated solid-state technology for nuclear medicine applications. It proposes designs for Positron Emission Tomography (PET), Positron Emission Mammography (PEM) and Compton gamma camera detectors with a large number of signal channels (of the order of 106). For Compton camera, especially with a large number of readout channels, image reconstruction presents a big challenge. In this work, results are presented for the List-Mode Ordered Subset Expectation Maximization (LM-OSEM) image reconstruction algorithm on simulated data with the VIP Compton camera design. For the simulation, all realistic contributions to the spatial resolution are taken into account, including the Doppler broadening effect. The results show that even with a straightforward implementation of LM-OSEM, good images can be obtained for the proposed Compton camera design. Results are shown for various phantoms, including extended sources and with a distance between the field of view and the first detector plane equal to 100 mm which corresponds to a realistic nuclear medicine environment.

Reconstructing baryon oscillations: A Lagrangian theory perspective

International Nuclear Information System (INIS)

Padmanabhan, Nikhil; White, Martin; Cohn, J. D.

2009-01-01

Recently Eisenstein and collaborators introduced a method to 'reconstruct' the linear power spectrum from a nonlinearly evolved galaxy distribution in order to improve precision in measurements of baryon acoustic oscillations. We reformulate this method within the Lagrangian picture of structure formation, to better understand what such a method does, and what the resulting power spectra are. We show that reconstruction does not reproduce the linear density field, at second order. We however show that it does reduce the damping of the oscillations due to nonlinear structure formation, explaining the improvements seen in simulations. Our results suggest that the reconstructed power spectrum is potentially better modeled as the sum of three different power spectra, each dominating over different wavelength ranges and with different nonlinear damping terms. Finally, we also show that reconstruction reduces the mode-coupling term in the power spectrum, explaining why miscalibrations of the acoustic scale are reduced when one considers the reconstructed power spectrum.

Flux flow and flux dynamics in high-Tc superconductors

International Nuclear Information System (INIS)

Bennett, L.H.; Turchinskaya, M.; Swartzendruber, L.J.; Roitburd, A.; Lundy, D.; Ritter, J.; Kaiser, D.L.

1991-01-01

Because high temperature superconductors, including BYCO and BSSCO, are type 2 superconductors with relatively low H(sub c 1) values and high H(sub c 2) values, they will be in a critical state for many of their applications. In the critical state, with the applied field between H(sub c 1) and H(sub c 2), flux lines have penetrated the material and can form a flux lattice and can be pinned by structural defects, chemical inhomogeneities, and impurities. A detailed knowledge of how flux penetrates the material and its behavior under the influence of applied fields and current flow, and the effect of material processing on these properties, is required in order to apply, and to improve the properties of these superconductors. When the applied field is changed rapidly, the time dependence of flux change can be divided into three regions, an initial region which occurs very rapidly, a second region in which the magnetization has a 1n(t) behavior, and a saturation region at very long times. A critical field is defined for depinning, H(sub c,p) as that field at which the hysteresis loop changes from irreversible to reversible. As a function of temperature, it is found that H(sub c,p) is well described by a power law with an exponent between 1.5 and 2.5. The behavior of H(sub c,p) for various materials and its relationship to flux flow and flux dynamics are discussed

Two dimensional electron transport in disordered and ordered distributions of magnetic flux vortices

International Nuclear Information System (INIS)

Nielsen, M.; Hedegaard, P.

1994-04-01

We have considered the conductivity properties of a two dimensional electron gas (2DEG) in two different kinds of inhomogeneous magnetic fields, i.e. a disordered distribution of magnetic flux vortices, and a periodic array of magnetic flux vortices. The work falls in two parts. In the first part we show how the phase shifts for an electron scattering on an isolated vortex, can be calculated analytically, and related to the transport properties through the differential cross section. In the second part we present numerical results for the Hall conductivity of the 2DEG in a periodic array of flux vortices found by exact diagonalization. We find characteristic spikes in the Hall conductance, when it is plotted against the filling fraction. It is argued that the spikes can be interpreted in terms of ''topological charge'' piling up across local and global gaps in the energy spectrum. (au) (23 refs.)

Low methane flux from a constructed boreal wetland

Science.gov (United States)

Clark, M. G.; Humphreys, E.; Carey, S. K.

2016-12-01

The Sandhill Fen Watershed project in northern Alberta, Canada, is a pilot study in reconstructing a mixed upland and lowland boreal plain ecosystem. The physical construction of the 50 ha area was completed in 2012 and revegetation programs, through planting and seeding, began that same year and continued into 2013. Since then, the vegetation has developed a substantial cover over the reclaimed soil and peat substrates used to cap the engineered topography constructed from mine tailings. To monitor the dynamics of carbon cycling processes in this novel ecosystem, near weekly gas chamber measurements of methane fluxes were carried out over 3 growing seasons. Soil moisture, temperature and ion flux measurements, using Plant Root Simulator probes, were also collected alongside the gas flux plots. In the 3rd season, a transect was established in the lowlands along a moisture gradient to collect continuous reduction-oxidation potential measurements along with these other variables. Overall, methane effluxes remained low relative to what is expected for rewetted organic substrates. However, there is a trend over time towards increasing methane gas emissions that coincides with increasing fluxes of reduced metal ions and decreasing fluxes of sulphate in the fully saturated substrates. The suppressed levels of methane fluxes are possibly due to naturally occurring high levels of sulphate in the donor materials used to cap the ecosystem construction.

Characterization of local heat fluxes around ICRF antennas on JET

Energy Technology Data Exchange (ETDEWEB)

Campergue, A.-L. [Ecole Nationale des Ponts et Chaussées, F77455 Marne-la-Vallée (France); Jacquet, P.; Monakhov, I.; Arnoux, G.; Brix, M.; Sirinelli, A. [Euratom/CCFE Association, Culham Science Centre, Abingdon, OX14 3DB (United Kingdom); Bobkov, V. [Max-Planck-Institut für Plasmaphysik, EURATOM-Assoziation, Garching (Germany); Milanesio, D. [Politecnico di Torino, Department of Electronics, Torino (Italy); Colas, L. [CEA, IRFM, F-13108 Saint-Paul-Lez-Durance (France); Collaboration: JET-EFDA Contributors

2014-02-12

When using Ion Cyclotron Range of Frequency (ICRF) heating, enhanced power deposition on Plasma-Facing Components (PFCs) close to the antennas can occur. Experiments have recently been carried out on JET with the new ITER-Like-Wall (ILW) to characterize the heat fluxes on the protection of the JET ICRF antennas, using Infra-Red (IR) thermography measurement. The measured heat flux patterns along the poloidal limiters surrounding powered antennas were compared to predictions from a simple RF sheath rectification model. The RF electric field, parallel to the static magnetic field in front of the antenna, was evaluated using the TOPICA code, integrating a 3D flattened model of the JET A2 antennas. The poloidal density variation in front of the limiters was obtained from the mapping of the Li-beam or edge reflectometry measurements using the flux surface geometry provided by EFIT equilibrium reconstruction. In many cases, this simple model can well explain the position of the maximum heat flux on the different protection limiters and the heat-flux magnitude, confirming that the parallel RF electric field and the electron plasma density in front of the antenna are the main driving parameters for ICRF-induced local heat fluxes.

Fast dictionary-based reconstruction for diffusion spectrum imaging.

Science.gov (United States)

Bilgic, Berkin; Chatnuntawech, Itthi; Setsompop, Kawin; Cauley, Stephen F; Yendiki, Anastasia; Wald, Lawrence L; Adalsteinsson, Elfar

2013-11-01

Diffusion spectrum imaging reveals detailed local diffusion properties at the expense of substantially long imaging times. It is possible to accelerate acquisition by undersampling in q-space, followed by image reconstruction that exploits prior knowledge on the diffusion probability density functions (pdfs). Previously proposed methods impose this prior in the form of sparsity under wavelet and total variation transforms, or under adaptive dictionaries that are trained on example datasets to maximize the sparsity of the representation. These compressed sensing (CS) methods require full-brain processing times on the order of hours using MATLAB running on a workstation. This work presents two dictionary-based reconstruction techniques that use analytical solutions, and are two orders of magnitude faster than the previously proposed dictionary-based CS approach. The first method generates a dictionary from the training data using principal component analysis (PCA), and performs the reconstruction in the PCA space. The second proposed method applies reconstruction using pseudoinverse with Tikhonov regularization with respect to a dictionary. This dictionary can either be obtained using the K-SVD algorithm, or it can simply be the training dataset of pdfs without any training. All of the proposed methods achieve reconstruction times on the order of seconds per imaging slice, and have reconstruction quality comparable to that of dictionary-based CS algorithm.

Modeling and Simulation of Optimal Resource Management during the Diurnal Cycle in Emiliania huxleyi by Genome-Scale Reconstruction and an Extended Flux Balance Analysis Approach.

Science.gov (United States)

Knies, David; Wittmüß, Philipp; Appel, Sebastian; Sawodny, Oliver; Ederer, Michael; Feuer, Ronny

2015-10-28

The coccolithophorid unicellular alga Emiliania huxleyi is known to form large blooms, which have a strong effect on the marine carbon cycle. As a photosynthetic organism, it is subjected to a circadian rhythm due to the changing light conditions throughout the day. For a better understanding of the metabolic processes under these periodically-changing environmental conditions, a genome-scale model based on a genome reconstruction of the E. huxleyi strain CCMP 1516 was created. It comprises 410 reactions and 363 metabolites. Biomass composition is variable based on the differentiation into functional biomass components and storage metabolites. The model is analyzed with a flux balance analysis approach called diurnal flux balance analysis (diuFBA) that was designed for organisms with a circadian rhythm. It allows storage metabolites to accumulate or be consumed over the diurnal cycle, while keeping the structure of a classical FBA problem. A feature of this approach is that the production and consumption of storage metabolites is not defined externally via the biomass composition, but the result of optimal resource management adapted to the diurnally-changing environmental conditions. The model in combination with this approach is able to simulate the variable biomass composition during the diurnal cycle in proximity to literature data.

Modeling and Simulation of Optimal Resource Management during the Diurnal Cycle in Emiliania huxleyi by Genome-Scale Reconstruction and an Extended Flux Balance Analysis Approach

Directory of Open Access Journals (Sweden)

David Knies

2015-10-01

Full Text Available The coccolithophorid unicellular alga Emiliania huxleyi is known to form large blooms, which have a strong effect on the marine carbon cycle. As a photosynthetic organism, it is subjected to a circadian rhythm due to the changing light conditions throughout the day. For a better understanding of the metabolic processes under these periodically-changing environmental conditions, a genome-scale model based on a genome reconstruction of the E. huxleyi strain CCMP 1516 was created. It comprises 410 reactions and 363 metabolites. Biomass composition is variable based on the differentiation into functional biomass components and storage metabolites. The model is analyzed with a flux balance analysis approach called diurnal flux balance analysis (diuFBA that was designed for organisms with a circadian rhythm. It allows storage metabolites to accumulate or be consumed over the diurnal cycle, while keeping the structure of a classical FBA problem. A feature of this approach is that the production and consumption of storage metabolites is not defined externally via the biomass composition, but the result of optimal resource management adapted to the diurnally-changing environmental conditions. The model in combination with this approach is able to simulate the variable biomass composition during the diurnal cycle in proximity to literature data.

Development of axisymmetric lattice Boltzmann flux solver for complex multiphase flows

Science.gov (United States)

Wang, Yan; Shu, Chang; Yang, Li-Ming; Yuan, Hai-Zhuan

2018-05-01

This paper presents an axisymmetric lattice Boltzmann flux solver (LBFS) for simulating axisymmetric multiphase flows. In the solver, the two-dimensional (2D) multiphase LBFS is applied to reconstruct macroscopic fluxes excluding axisymmetric effects. Source terms accounting for axisymmetric effects are introduced directly into the governing equations. As compared to conventional axisymmetric multiphase lattice Boltzmann (LB) method, the present solver has the kinetic feature for flux evaluation and avoids complex derivations of external forcing terms. In addition, the present solver also saves considerable computational efforts in comparison with three-dimensional (3D) computations. The capability of the proposed solver in simulating complex multiphase flows is demonstrated by studying single bubble rising in a circular tube. The obtained results compare well with the published data.

Synthetic biology's tall order: Reconstruction of 3D, super resolution images of single molecules in real-time

CSIR Research Space (South Africa)

Henriques, R

2010-08-31

Full Text Available -to-use reconstruction software coupled with image acquisition. Here, we present QuickPALM, an Image plugin, enabling real-time reconstruction of 3D super-resolution images during acquisition and drift correction. We illustrate its application by reconstructing Cy5...

Yeast 5 – an expanded reconstruction of the Saccharomyces cerevisiae metabolic network

Directory of Open Access Journals (Sweden)

Heavner Benjamin D

2012-06-01

Full Text Available Abstract Background Efforts to improve the computational reconstruction of the Saccharomyces cerevisiae biochemical reaction network and to refine the stoichiometrically constrained metabolic models that can be derived from such a reconstruction have continued since the first stoichiometrically constrained yeast genome scale metabolic model was published in 2003. Continuing this ongoing process, we have constructed an update to the Yeast Consensus Reconstruction, Yeast 5. The Yeast Consensus Reconstruction is a product of efforts to forge a community-based reconstruction emphasizing standards compliance and biochemical accuracy via evidence-based selection of reactions. It draws upon models published by a variety of independent research groups as well as information obtained from biochemical databases and primary literature. Results Yeast 5 refines the biochemical reactions included in the reconstruction, particularly reactions involved in sphingolipid metabolism; updates gene-reaction annotations; and emphasizes the distinction between reconstruction and stoichiometrically constrained model. Although it was not a primary goal, this update also improves the accuracy of model prediction of viability and auxotrophy phenotypes and increases the number of epistatic interactions. This update maintains an emphasis on standards compliance, unambiguous metabolite naming, and computer-readable annotations available through a structured document format. Additionally, we have developed MATLAB scripts to evaluate the model’s predictive accuracy and to demonstrate basic model applications such as simulating aerobic and anaerobic growth. These scripts, which provide an independent tool for evaluating the performance of various stoichiometrically constrained yeast metabolic models using flux balance analysis, are included as Additional files 1, 2 and 3. Additional file 1 Function testYeastModel.m.m. Click here for file Additional file 2 Function modelToReconstruction

High-order finite volume advection

OpenAIRE

Shaw, James

2018-01-01

The cubicFit advection scheme is limited to second-order convergence because it uses a polynomial reconstruction fitted to point values at cell centres. The highOrderFit advection scheme achieves higher than second order by calculating high-order moments over the mesh geometry.

Reconstruction of the energy flux and search for squarks and gluinos in D0 experiment; Reconstruction du flux d'energie et recherche de squarks et gluinos dans l'experience D0

Energy Technology Data Exchange (ETDEWEB)

Ridel, M

2002-04-01

The D{phi} experiment is located at the Fermi National Accelerator Laboratory on the TeVatron proton-antiproton collider. The Run II has started in march 2001 after 5 years of shutdown and will allow D{phi} extend its reach in squarks and gluinos searches, particles predicted by supersymmetry. In this work, I focussed on their decays that lead to signature with jets and missing transverse energy. But before the data taking started, I studied both software and hardware ways to improve the energy measurement which is crucial for jets and for missing transverse energy. Energy deposits in the calorimeter has been clustered with cellNN, at the cell level instead of the tower level. Efforts have been made to take advantage of the calorimeter granularity to aim at individual particles showers reconstruction. CellNN starts from the third floor which has a quadruple granularity compared to the other floors. The longitudinal information has been used to detect electromagnetic and hadronic showers overlaps. Then, clusters and reconstructed tracks from the central detectors are combined and their energies compared. The better measurement is kept. Using this procedure allows to improve the reconstruction of each event energy flow. The efficiency of the current calorimeter triggers has been determined. They has been used to perform a Monte Carlo search analysis of squarks and gluinos in the mSUGRA framework. The lower bound that Ddiameter will be able to put on squarks and gluinos masses with a 100 pb{sup -1} integrated luminosity has been predicted. The use of the energy flow instead of standard reconstruction tools will be able to improve this lower limit. (author)

Pre-Hawking radiation may allow for reconstruction of the mass distribution of the collapsing object

Energy Technology Data Exchange (ETDEWEB)

Dai, De-Chang, E-mail: diedachung@gmail.com [Institute of Natural Sciences, Shanghai Key Lab for Particle Physics and Cosmology, and Center for Astrophysics and Astronomy, Department of Physics and Astronomy, Shanghai Jiao Tong University, Shanghai 200240 (China); Stojkovic, Dejan [HEPCOS, Department of Physics, SUNY, University at Buffalo, Buffalo, NY 14260-1500 (United States)

2016-07-10

Hawking radiation explicitly depends only on the black hole's total mass, charge and angular momentum. It is therefore generally believed that one cannot reconstruct the information about the initial mass distribution of an object that made the black hole. However, instead of looking at radiation from a static black hole, we can study the whole time-dependent process of the gravitational collapse, and pre-Hawking radiation which is excited because of the time-dependent metric. We compare radiation emitted by a single collapsing shell with that emitted by two concentric shells of the equivalent total mass. We calculate the gravitational trajectory and the momentum energy tensor. We show that the flux of energy emitted during the collapse by a single shell is significantly different from the flux emitted by two concentric shells of the equivalent total mass. When the static black hole is formed, the fluxes become indistinguishable. This implies that an observer studying the flux of particles from a collapsing object could in principle reconstruct information not only about the total mass of the collapsing object, but also about the mass distribution.

Pre-Hawking radiation may allow for reconstruction of the mass distribution of the collapsing object

Directory of Open Access Journals (Sweden)

De-Chang Dai

2016-07-01

Full Text Available Hawking radiation explicitly depends only on the black hole's total mass, charge and angular momentum. It is therefore generally believed that one cannot reconstruct the information about the initial mass distribution of an object that made the black hole. However, instead of looking at radiation from a static black hole, we can study the whole time-dependent process of the gravitational collapse, and pre-Hawking radiation which is excited because of the time-dependent metric. We compare radiation emitted by a single collapsing shell with that emitted by two concentric shells of the equivalent total mass. We calculate the gravitational trajectory and the momentum energy tensor. We show that the flux of energy emitted during the collapse by a single shell is significantly different from the flux emitted by two concentric shells of the equivalent total mass. When the static black hole is formed, the fluxes become indistinguishable. This implies that an observer studying the flux of particles from a collapsing object could in principle reconstruct information not only about the total mass of the collapsing object, but also about the mass distribution.

On the Tensorial Nature of Fluxes in Continuous Media.

Science.gov (United States)

Stokes, Vijay Kumar; Ramkrishna, Doraiswami

1982-01-01

Argues that mass and energy fluxes in a fluid are vectors. Topics include the stress tensor, theorem for tensor fields, mass flux as a vector, stress as a second order tensor, and energy flux as a tensor. (SK)

Reconstruction of emission coefficients for a non-axisymmetric coupling arc by algebraic reconstruction technique

International Nuclear Information System (INIS)

Zhang Guangjun; Xiong Jun; Gao Hongming; Wu Lin

2011-01-01

A preliminary investigation of tomographic reconstruction of an asymmetric arc plasma has been carried out. The objective of this work aims at reconstructing emission coefficients of a non-axisymmetric coupling arc from measured intensities by means of an algebraic reconstruction technique (ART). In order to define the optimal experimental scheme for good quality with limited views, the dependence of the reconstruction quality on three configurations (four, eight, ten projection angles) are presented and discussed via a displaced Gaussian model. Then, the emission coefficients of a free burning arc are reconstructed by the ART with the ten-view configuration and an Abel inversion, respectively, and good agreement is obtained. Finally, the emission coefficient profiles of the coupling arc are successfully achieved with the ten-view configuration. The results show that the distribution of emission coefficient for the coupling arc is different from centrosymmetric shape. The ART is perfectly suitable for reconstructing emission coefficients of the coupling arc with the ten-view configuration, proving the feasibility and utility of the ART to characterize an asymmetric arc.

Fast implementations of reconstruction-based scatter compensation in fully 3D SPECT image reconstruction

International Nuclear Information System (INIS)

Kadrmas, Dan J.; Karimi, Seemeen S.; Frey, Eric C.; Tsui, Benjamin M.W.

1998-01-01

Accurate scatter compensation in SPECT can be performed by modelling the scatter response function during the reconstruction process. This method is called reconstruction-based scatter compensation (RBSC). It has been shown that RBSC has a number of advantages over other methods of compensating for scatter, but using RBSC for fully 3D compensation has resulted in prohibitively long reconstruction times. In this work we propose two new methods that can be used in conjunction with existing methods to achieve marked reductions in RBSC reconstruction times. The first method, coarse-grid scatter modelling, significantly accelerates the scatter model by exploiting the fact that scatter is dominated by low-frequency information. The second method, intermittent RBSC, further accelerates the reconstruction process by limiting the number of iterations during which scatter is modelled. The fast implementations were evaluated using a Monte Carlo simulated experiment of the 3D MCAT phantom with 99m Tc tracer, and also using experimentally acquired data with 201 Tl tracer. Results indicated that these fast methods can reconstruct, with fully 3D compensation, images very similar to those obtained using standard RBSC methods, and in reconstruction times that are an order of magnitude shorter. Using these methods, fully 3D iterative reconstruction with RBSC can be performed well within the realm of clinically realistic times (under 10 minutes for 64x64x24 image reconstruction). (author)

Generation mechanism of L-value dependence of oxygen flux enhancements during substorms

Science.gov (United States)

Nakayama, Y.; Ebihara, Y.; Tanaka, T.; Ohtani, S.; Gkioulidou, M.; Takahashi, K.; Kistler, L. M.; Kletzing, C.

2015-12-01

The Van Allen Probes Helium Oxygen Proton Electron (HOPE) instrument measures charged particles with an energy range from ~eV to ~ tens of keV. The observation shows that the energy flux of the particles increases inside the geosynchronous orbit during substorms. For some night-side events around the apogee, the energy flux of O+ ion enhances below ~10 keV at lower L shell, whereas the flux below ~8 keV sharply decreases at higher L shells. This structure of L-energy spectrogram of flux is observed only for the O+ ions. The purpose of this study is to investigate the generation mechanism of the structure by using numerical simulations. We utilized the global MHD simulation developed by Tanaka et al (2010, JGR) to simulate the electric and magnetic fields during substorms. We performed test particle simulation under the electric and magnetic fields by applying the same model introduced by Nakayama et al. (2015, JGR). In the test particle simulation each test particle carries the real number of particles in accordance with the Liouville theorem. Using the real number of particles, we reconstructed 6-dimensional phase space density and differential flux of O+ ions in the inner magnetosphere. We obtained the following results. (1) Just after the substorm onset, the dawn-to-dusk electric field is enhanced to ~ 20 mV/m in the night side tail region at L > 7. (2) The O+ ions are accelerated and transported to the inner region (L > ~5.5) by the large-amplitude electric field. (3) The reconstructed L-energy spectrogram shows a similar structure to the Van Allen Probes observation. (4) The difference in the flux enhancement between at lower L shell and higher L shells is due to two distinct acceleration processes: adiabatic and non-adiabatic. We will discuss the relationship between the particle acceleration and the structure of L-energy spectrogram of flux enhancement in detail.

Progress towards the use of publicly available data networks to conduct cross-scale historical reconstructions of carbon dynamics in US Drylands

Science.gov (United States)

Washington-Allen, R. A.; Landolt, K.; Emanuel, R. E.; Therrell, M. D.; Nagle, N.; Grissino-Mayer, H. D.; Poulter, B.

2016-12-01

Emergent scale properties of water-limited or Dryland ecosystem's carbon flux are unknown at spatial scales from local to global and time scales of 10 - 1000 years or greater. The width of a tree ring is a metric of production that has been correlated with the amount of precipitation. This relationship has been used to reconstruct rainfall and fire histories in the Drylands of the southwestern US. The normalized difference vegetation index (NDVI) is globally measured by selected satellite sensors and is highly correlated with the fraction of solar radiation which is absorbed for photosynthesis by plants (FPAR), as well as with vegetation biomass, net primary productivity (NPP), and tree ring width. Publicly available web-based archives of free NDVI and tree ring data exist and have allowed historical temporal reconstructions of carbon dynamics for the past 300 to 500 years. Climate and tree ring databases have been used to spatially reconstruct drought dynamics for the last 500 years in the western US. In 2007, we hypothesized that NDVI and tree ring width could be used to spatially reconstruct carbon dynamics in US Drylands. In 2015, we succeeded with a 300-year historical spatial reconstruction of NPP in California using a Blue Oak tree ring chronology. Online eddy covariance flux tower measures of NPP are well correlated with satellite measures of NPP. This suggests that net ecosystem exchange (NEE = NPP - soil Respiration) could be historically reconstructed across Drylands. Ongoing research includes 1) scaling historical spatial reconstruction to US Drylands, 2) comparing the use of single versus multiple tree ring species (r2 = 68) and 3) use of the eddy flux tower network, remote sensing, and tree ring data to historically spatially reconstruct Dryland NEE.

Fast Dictionary-Based Reconstruction for Diffusion Spectrum Imaging

Science.gov (United States)

Bilgic, Berkin; Chatnuntawech, Itthi; Setsompop, Kawin; Cauley, Stephen F.; Yendiki, Anastasia; Wald, Lawrence L.; Adalsteinsson, Elfar

2015-01-01

Diffusion Spectrum Imaging (DSI) reveals detailed local diffusion properties at the expense of substantially long imaging times. It is possible to accelerate acquisition by undersampling in q-space, followed by image reconstruction that exploits prior knowledge on the diffusion probability density functions (pdfs). Previously proposed methods impose this prior in the form of sparsity under wavelet and total variation (TV) transforms, or under adaptive dictionaries that are trained on example datasets to maximize the sparsity of the representation. These compressed sensing (CS) methods require full-brain processing times on the order of hours using Matlab running on a workstation. This work presents two dictionary-based reconstruction techniques that use analytical solutions, and are two orders of magnitude faster than the previously proposed dictionary-based CS approach. The first method generates a dictionary from the training data using Principal Component Analysis (PCA), and performs the reconstruction in the PCA space. The second proposed method applies reconstruction using pseudoinverse with Tikhonov regularization with respect to a dictionary. This dictionary can either be obtained using the K-SVD algorithm, or it can simply be the training dataset of pdfs without any training. All of the proposed methods achieve reconstruction times on the order of seconds per imaging slice, and have reconstruction quality comparable to that of dictionary-based CS algorithm. PMID:23846466

Detector independent cellular automaton algorithm for track reconstruction

Energy Technology Data Exchange (ETDEWEB)

Kisel, Ivan; Kulakov, Igor; Zyzak, Maksym [Goethe Univ. Frankfurt am Main (Germany); Frankfurt Institute for Advanced Studies, Frankfurt am Main (Germany); GSI Helmholtzzentrum fuer Schwerionenforschung GmbH (Germany); Collaboration: CBM-Collaboration

2013-07-01

Track reconstruction is one of the most challenging problems of data analysis in modern high energy physics (HEP) experiments, which have to process per second of the order of 10{sup 7} events with high track multiplicity and density, registered by detectors of different types and, in many cases, located in non-homogeneous magnetic field. Creation of reconstruction package common for all experiments is considered to be important in order to consolidate efforts. The cellular automaton (CA) track reconstruction approach has been used successfully in many HEP experiments. It is very simple, efficient, local and parallel. Meanwhile it is intrinsically independent of detector geometry and good candidate for common track reconstruction. The CA implementation for the CBM experiment has been generalized and applied to the ALICE ITS and STAR HFT detectors. Tests with simulated collisions have been performed. The track reconstruction efficiencies are at the level of 95% for majority of the signal tracks for all detectors.

Plasma Shape Control on the National Spherical Torus Experiment using Real-time Equilibrium Reconstruction

International Nuclear Information System (INIS)

Gates, D.A.; Ferron, J.R.; Bell, M.; Gibney, T.; Johnson, R.; Marsala, R.J.; Mastrovito, D.; Menard, J.E.; Mueller, D.; Penaflor, B.; Sabbagh, S.A.; Stevenson, T.

2005-01-01

Plasma shape control using real-time equilibrium reconstruction has been implemented on the National Spherical Torus Experiment (NSTX). The rtEFIT code originally developed for use on DIII-D was adapted for use on NSTX. The real-time equilibria provide calculations of the flux at points on the plasma boundary, which is used as input to a shape control algorithm known as isoflux control. The flux at the desired boundary location is compared to a reference flux value, and this flux error is used as the basic feedback quantity for the poloidal-field coils on NSTX. The hardware that comprises the control system is described, as well as the software infrastructure. Examples of precise boundary control are also presented

Four-flux and warped heterotic M-theory compactifications

International Nuclear Information System (INIS)

Curio, Gottfried; Krause, Axel

2001-01-01

In the framework of heterotic M-theory compactified on a Calabi-Yau threefold 'times' an interval, the relation between geometry and four-flux is derived beyond first order. Besides the case with general flux which cannot be described by a warped geometry one is naturally led to consider two special types of four-flux in detail. One choice shows how the M-theory relation between warped geometry and flux reproduces the analogous one of the weakly coupled heterotic string with torsion. The other one leads to a quadratic dependence of the Calabi-Yau volume with respect to the orbifold direction which avoids the problem with negative volume of the first order approximation. As in the first order analysis we still find that Newton's constant is bounded from below at just the phenomenologically relevant value. However, the bound does not require an ad hoc truncation of the orbifold-size any longer. Finally we demonstrate explicitly that to leading order in κ 2/3 no Cosmological constant is induced in the four-dimensional low-energy action. This is in accord with what one can expect from supersymmetry

Analytical method for reconstruction pin to pin of the nuclear power density distribution

International Nuclear Information System (INIS)

Pessoa, Paulo O.; Silva, Fernando C.; Martinez, Aquilino S.

2013-01-01

An accurate and efficient method for reconstructing pin to pin of the nuclear power density distribution, involving the analytical solution of the diffusion equation for two-dimensional neutron energy groups in homogeneous nodes, is presented. The boundary conditions used for analytic as solution are the four currents or fluxes on the surface of the node, which are obtained by Nodal Expansion Method (known as NEM) and four fluxes at the vertices of a node calculated using the finite difference method. The analytical solution found is the homogeneous distribution of neutron flux. Detailed distributions pin to pin inside a fuel assembly are estimated by the product of homogeneous flux distribution by local heterogeneous form function. Furthermore, the form functions of flux and power are used. The results obtained with this method have a good accuracy when compared with reference values. (author)

Analytical method for reconstruction pin to pin of the nuclear power density distribution

Energy Technology Data Exchange (ETDEWEB)

Pessoa, Paulo O.; Silva, Fernando C.; Martinez, Aquilino S., E-mail: ppessoa@con.ufrj.br, E-mail: fernando@con.ufrj.br, E-mail: aquilino@imp.ufrj.br [Coordenacao dos Programas de Pos-Graduacao em Engenharia (COPPE/UFRJ), Rio de Janeiro, RJ (Brazil)

2013-07-01

An accurate and efficient method for reconstructing pin to pin of the nuclear power density distribution, involving the analytical solution of the diffusion equation for two-dimensional neutron energy groups in homogeneous nodes, is presented. The boundary conditions used for analytic as solution are the four currents or fluxes on the surface of the node, which are obtained by Nodal Expansion Method (known as NEM) and four fluxes at the vertices of a node calculated using the finite difference method. The analytical solution found is the homogeneous distribution of neutron flux. Detailed distributions pin to pin inside a fuel assembly are estimated by the product of homogeneous flux distribution by local heterogeneous form function. Furthermore, the form functions of flux and power are used. The results obtained with this method have a good accuracy when compared with reference values. (author)

Modeling Lactococcus lactis using a genome-scale flux model

Directory of Open Access Journals (Sweden)

Nielsen Jens

2005-06-01

Full Text Available Abstract Background Genome-scale flux models are useful tools to represent and analyze microbial metabolism. In this work we reconstructed the metabolic network of the lactic acid bacteria Lactococcus lactis and developed a genome-scale flux model able to simulate and analyze network capabilities and whole-cell function under aerobic and anaerobic continuous cultures. Flux balance analysis (FBA and minimization of metabolic adjustment (MOMA were used as modeling frameworks. Results The metabolic network was reconstructed using the annotated genome sequence from L. lactis ssp. lactis IL1403 together with physiological and biochemical information. The established network comprised a total of 621 reactions and 509 metabolites, representing the overall metabolism of L. lactis. Experimental data reported in the literature was used to fit the model to phenotypic observations. Regulatory constraints had to be included to simulate certain metabolic features, such as the shift from homo to heterolactic fermentation. A minimal medium for in silico growth was identified, indicating the requirement of four amino acids in addition to a sugar. Remarkably, de novo biosynthesis of four other amino acids was observed even when all amino acids were supplied, which is in good agreement with experimental observations. Additionally, enhanced metabolic engineering strategies for improved diacetyl producing strains were designed. Conclusion The L. lactis metabolic network can now be used for a better understanding of lactococcal metabolic capabilities and potential, for the design of enhanced metabolic engineering strategies and for integration with other types of 'omic' data, to assist in finding new information on cellular organization and function.

Prediction and reconstruction of future and missing unobservable modified Weibull lifetime based on generalized order statistics

Directory of Open Access Journals (Sweden)

Amany E. Aly

2016-04-01

Full Text Available When a system consisting of independent components of the same type, some appropriate actions may be done as soon as a portion of them have failed. It is, therefore, important to be able to predict later failure times from earlier ones. One of the well-known failure distributions commonly used to model component life, is the modified Weibull distribution (MWD. In this paper, two pivotal quantities are proposed to construct prediction intervals for future unobservable lifetimes based on generalized order statistics (gos from MWD. Moreover, a pivotal quantity is developed to reconstruct missing observations at the beginning of experiment. Furthermore, Monte Carlo simulation studies are conducted and numerical computations are carried out to investigate the efficiency of presented results. Finally, two illustrative examples for real data sets are analyzed.

Second Order Volume of Fluid Interface Reconstruction Method in Three Dimensions%三维空间二阶精度流体体积界面重构方法

Institute of Scientific and Technical Information of China (English)

梁仙红

2013-01-01

给出三维空间网格模板含81个单元的最小二乘流体体积界面重构方法,并和Youngs方法及网格模板含125个单元的最小二乘流体体积界面重构方法进行比较.静态和动态的测试例子均表明:该方法能精确重构任意方向的平面界面,对C2光滑曲面它能达到二阶收敛精度.和网格模板含125个单元的最小二乘流体体积界面重构方法相比,在达到同样网格精度的条件下,减少了计算量,节省了计算时间,提高了计算效率.%A second order least squares volume of fluid interface reconstruction algorithm with 81 cells in mesh stencil is introduced.The algorithm is compared with Youngs algorithm and a second order least squares volume of fluid interface reconstruction algorithm with 125 cells in mesh stencil.L∞ criteria function in three dimensions is used to measure stationary interface reconstruction errors.Stationary and advecting tests show that the algorithm can track any oriented plane exactly and it is second order accurate.Compared with second order least squares volume of fluid interface reconstruction algorithm with 125 cells in mesh stencil,calculation amount of the algoritm is much smaller.Thus CPU time is saved and computing efficiency is improved.

Higher order harmonics of reactor neutron equation

International Nuclear Information System (INIS)

Li Fu; Hu Yongming; Luo Zhengpei

1996-01-01

The flux mapping method using the higher order harmonics of the neutron equation is proposed. Based on the bi-orthogonality of the higher order harmonics, the process and formulas for higher order harmonics calculation are derived via the source iteration method with source correction. For the first time, not only any order harmonics for up-to-3-dimensional geometry are achieved, but also the preliminary verification to the capability for flux mapping have been carried out

Modeling of Eddy current distribution and equilibrium reconstruction in the SST-1 Tokamak

International Nuclear Information System (INIS)

Banerjee, Santanu; Sharma, Deepti; Radhakrishnana, Srinivasan; Daniel, Raju; Shankara Joisa, Y.; Atrey, Parveen Kumar; Pathak, Surya Kumar; Singh, Amit Kumar

2015-01-01

Toroidal continuity of the vacuum vessel and the cryostat leads to the generation of large eddy currents in these passive structures during the Ohmic phase of the steady state superconducting tokamak SST-1. This reduces the magnitude of the loop voltage seen by the plasma as also delays its buildup. During the ramping down of the Ohmic transformer current (OT), the resultant eddy currents flowing in the passive conductors play a crucial role in governing the plasma equilibrium. Amount of this eddy current and its distribution has to be accurately determined such that this can be fed to the equilibrium reconstruction code as an input. For the accurate inclusion of the effect of eddy currents in the reconstruction, the toroidally continuous conducting structures like the vacuum vessel and the cryostat with large poloidal cross-section and any other poloidal field (PF) coil sitting idle on the machine are broken up into a large number of co-axial toroidal current carrying filaments. The inductance matrix for this large set of toroidal current carrying conductors is calculated using the standard Green's function and the induced currents are evaluated for the OT waveform of each plasma discharge. Consistency of this filament model is cross-checked with the 11 in-vessel and 12 out-vessel toroidal flux loop signals in SST-1. Resistances of the filaments are adjusted to reproduce the experimental measurements of these flux loops in pure OT shots and shots with OT and vertical field (BV). Such shots are taken routinely in SST-1 without the fill gas to cross-check the consistency of the filament model. A Grad-Shafranov (GS) equation solver, named as IPREQ, has been developed in IPR to reconstruct the plasma equilibrium through searching for the best-fit current density profile. Ohmic transformer current (OT), vertical field coil current (BV), currents in the passive filaments along with the plasma pressure (p) and current (I p ) profiles are used as inputs to the IPREQ

Reconstruction of the central carbon metabolism of Aspergillus niger

DEFF Research Database (Denmark)

David, Helga; Åkesson, Mats Fredrik; Nielsen, Jens

2003-01-01

The topology of central carbon metabolism of Aspergillus niger was identified and the metabolic network reconstructed, by integrating genomic, biochemical and physiological information available for this microorganism and other related fungi. The reconstructed network may serve as a valuable...... of metabolic fluxes using metabolite balancing. This framework was employed to perform an in silico characterisation of the phenotypic behaviour of A. niger grown on different carbon sources. The effects on growth of single reaction deletions were assessed and essential biochemical reactions were identified...... for different carbon sources. Furthermore, application of the stoichiometric model for assessing the metabolic capabilities of A. niger to produce metabolites was evaluated by using succinate production as a case study....

Direct Torque Control with Full Order Stator Flux Observer for Dual-Three Phase Induction Motor Drives

Science.gov (United States)

Farina, Francesco; Bojoi, Radu; Tenconi, Alberto; Profumo, Francesco

A Direct Torque Control (DTC) strategy for dual-three phase induction motor drives is discussed in this paper. The induction machine has two sets of stator three-phase windings spatially shifted by 30 electrical degrees with isolated neutral points. The proposed control strategy is based on Proportional Integral (PI) regulators implemented in the stator flux synchronous reference frame. To improve the flux estimation, an Adaptive Stator Flux Observer (ASFO) has been used. Doing so, besides a better flux estimation in contrast to open-loop flux estimators, it is possible to use the observed currents to compensate the inverter non-linear behavior (such as dead-time effects), improving the drive performance at low speed. This is particularly important for low voltage/high current applications, as the drive considered in this paper. The advantages of the discussed control strategy are: constant inverter switching frequency, good transient and steady-state performance and less distorted machine currents in contrast to DTC schemes with variable switching frequency. Experimental results are presented for a 10kW dual three-phase induction motor drive prototype.

P fluxes and exotic branes

Energy Technology Data Exchange (ETDEWEB)

Lombardo, Davide M. [Dipartimento di Fisica, Università di Roma “La Sapienza”,Piazzale Aldo Moro 2, 00185 Roma (Italy); Riccioni, Fabio [INFN - Sezione di Roma, Dipartimento di Fisica, Università di Roma “La Sapienza”,Piazzale Aldo Moro 2, 00185 Roma (Italy); Risoli, Stefano [Dipartimento di Fisica, Università di Roma “La Sapienza”,Piazzale Aldo Moro 2, 00185 Roma (Italy); INFN - Sezione di Roma, Dipartimento di Fisica, Università di Roma “La Sapienza”,Piazzale Aldo Moro 2, 00185 Roma (Italy)

2016-12-21

We consider the N=1 superpotential generated in type-II orientifold models by non-geometric fluxes. In particular, we focus on the family of P fluxes, that are related by T-duality transformations to the S-dual of the Q flux. We determine the general rule that transforms a given flux in this family under a single T-duality transformation. This rule allows to derive a complete expression for the superpotential for both the IIA and the IIB theory for the particular case of a T{sup 6}/[ℤ{sub 2}×ℤ{sub 2}] orientifold. We then consider how these fluxes modify the generalised Bianchi identities. In particular, we derive a fully consistent set of quadratic constraints coming from the NS-NS Bianchi identities. On the other hand, the P flux Bianchi identities induce tadpoles, and we determine a set of exotic branes that can be consistently included in order to cancel them. This is achieved by determining a universal transformation rule under T-duality satisfied by all the branes in string theory.

P fluxes and exotic branes

International Nuclear Information System (INIS)

Lombardo, Davide M.; Riccioni, Fabio; Risoli, Stefano

2016-01-01

We consider the N=1 superpotential generated in type-II orientifold models by non-geometric fluxes. In particular, we focus on the family of P fluxes, that are related by T-duality transformations to the S-dual of the Q flux. We determine the general rule that transforms a given flux in this family under a single T-duality transformation. This rule allows to derive a complete expression for the superpotential for both the IIA and the IIB theory for the particular case of a T 6 /[ℤ 2 ×ℤ 2 ] orientifold. We then consider how these fluxes modify the generalised Bianchi identities. In particular, we derive a fully consistent set of quadratic constraints coming from the NS-NS Bianchi identities. On the other hand, the P flux Bianchi identities induce tadpoles, and we determine a set of exotic branes that can be consistently included in order to cancel them. This is achieved by determining a universal transformation rule under T-duality satisfied by all the branes in string theory.

Reconstructing random media

International Nuclear Information System (INIS)

Yeong, C.L.; Torquato, S.

1998-01-01

We formulate a procedure to reconstruct the structure of general random heterogeneous media from limited morphological information by extending the methodology of Rintoul and Torquato [J. Colloid Interface Sci. 186, 467 (1997)] developed for dispersions. The procedure has the advantages that it is simple to implement and generally applicable to multidimensional, multiphase, and anisotropic structures. Furthermore, an extremely useful feature is that it can incorporate any type and number of correlation functions in order to provide as much morphological information as is necessary for accurate reconstruction. We consider a variety of one- and two-dimensional reconstructions, including periodic and random arrays of rods, various distribution of disks, Debye random media, and a Fontainebleau sandstone sample. We also use our algorithm to construct heterogeneous media from specified hypothetical correlation functions, including an exponentially damped, oscillating function as well as physically unrealizable ones. copyright 1998 The American Physical Society

Atmosphere–Surface Fluxes of CO2 using Spectral Techniques

DEFF Research Database (Denmark)

Sørensen, Lise Lotte; Larsen, Søren Ejling

2010-01-01

Different flux estimation techniques are compared here in order to evaluate air–sea exchange measurement methods used on moving platforms. Techniques using power spectra and cospectra to estimate fluxes are presented and applied to measurements of wind speed and sensible heat, latent heat and CO2...... fluxes. Momentum and scalar fluxes are calculated from the dissipation technique utilizing the inertial subrange of the power spectra and from estimation of the cospectral amplitude, and both flux estimates are compared to covariance derived fluxes. It is shown how even data having a poor signal......-to-noise ratio can be used for flux estimations....

Primary Anterior Cruciate Ligament Reconstruction. How Do We Do It?

Directory of Open Access Journals (Sweden)

Todor Adrian

2016-11-01

Full Text Available Anterior cruciate ligament (ACL tears are frequently seen in current practice mostly affecting the young, active subjects, and usually require ligament reconstruction in order to restore normal knee kinematics. As worldwide interest in anatomic reconstruction grew over the last decade, we have also refined our technique in order to restore the anatomical function as near to the normal as possible. This anatomical restoration concept is believed to prevent the onset of osteoarthritis, which the non-anatomic reconstructions fail to attain. The knowledge gained from the ACL anatomy, function and kinematics has helped in developing the current anatomic methods of reconstruction, which take into account patient anatomy, the rupture pattern, as well as the comorbidities. We present our approach to anatomical single- and double-bundle ACL reconstruction.

Reconstruction of the energy flux and search for squarks and gluinos in D0 experiment

International Nuclear Information System (INIS)

Ridel, M.

2002-04-01

The DΦ experiment is located at the Fermi National Accelerator Laboratory on the TeVatron proton-antiproton collider. The Run II has started in march 2001 after 5 years of shutdown and will allow DΦ extend its reach in squarks and gluinos searches, particles predicted by supersymmetry. In this work, I focussed on their decays that lead to signature with jets and missing transverse energy. But before the data taking started, I studied both software and hardware ways to improve the energy measurement which is crucial for jets and for missing transverse energy. Energy deposits in the calorimeter has been clustered with cellNN, at the cell level instead of the tower level. Efforts have been made to take advantage of the calorimeter granularity to aim at individual particles showers reconstruction. CellNN starts from the third floor which has a quadruple granularity compared to the other floors. The longitudinal information has been used to detect electromagnetic and hadronic showers overlaps. Then, clusters and reconstructed tracks from the central detectors are combined and their energies compared. The better measurement is kept. Using this procedure allows to improve the reconstruction of each event energy flow. The efficiency of the current calorimeter triggers has been determined. They has been used to perform a Monte Carlo search analysis of squarks and gluinos in the mSUGRA framework. The lower bound that Ddiameter will be able to put on squarks and gluinos masses with a 100 pb -1 integrated luminosity has been predicted. The use of the energy flow instead of standard reconstruction tools will be able to improve this lower limit. (author)

What can the annual 10Be solar activity reconstructions tell us about historic space weather?

Science.gov (United States)

Barnard, Luke; McCracken, Ken G.; Owens, Mat J.; Lockwood, Mike

2018-04-01

Context: Cosmogenic isotopes provide useful estimates of past solar magnetic activity, constraining past space climate with reasonable uncertainty. Much less is known about past space weather conditions. Recent advances in the analysis of 10Be by McCracken & Beer (2015, Sol Phys 290: 305-3069) (MB15) suggest that annually resolved 10Be can be significantly affected by solar energetic particle (SEP) fluxes. This poses a problem, and presents an opportunity, as the accurate quantification of past solar magnetic activity requires the SEP effects to be determined and isolated, whilst doing so might provide a valuable record of past SEP fluxes. Aims: We compare the MB15 reconstruction of the heliospheric magnetic field (HMF), with two independent estimates of the HMF derived from sunspot records and geomagnetic variability. We aim to quantify the differences between the HMF reconstructions, and speculate on the origin of these differences. We test whether the differences between the reconstructions appear to depend on known significant space weather events. Methods: We analyse the distributions of the differences between the HMF reconstructions. We consider how the differences vary as a function of solar cycle phase, and, using a Kolmogorov-Smirnov test, we compare the distributions under the two conditions of whether or not large space weather events were known to have occurred. Results: We find that the MB15 reconstructions are generally marginally smaller in magnitude than the sunspot and geomagnetic HMF reconstructions. This bias varies as a function of solar cycle phase, and is largest in the declining phase of the solar cycle. We find that MB15's excision of the years with very large ground level enhancement (GLE) improves the agreement of the 10Be HMF estimate with the sunspot and geomagnetic reconstructions. We find no statistical evidence that GLEs, in general, affect the MB15 reconstruction, but this analysis is limited by having too few samples. We do find

Jini service to reconstruct tomographic data

Science.gov (United States)

Knoll, Peter; Mirzaei, S.; Koriska, K.; Koehn, H.

2002-06-01

A number of imaging systems rely on the reconstruction of a 3- dimensional model from its projections through the process of computed tomography (CT). In medical imaging, for example magnetic resonance imaging (MRI), positron emission tomography (PET), and Single Computer Tomography (SPECT) acquire two-dimensional projections of a three dimensional projections of a three dimensional object. In order to calculate the 3-dimensional representation of the object, i.e. its voxel distribution, several reconstruction algorithms have been developed. Currently, mainly two reconstruct use: the filtered back projection(FBP) and iterative methods. Although the quality of iterative reconstructed SPECT slices is better than that of FBP slices, such iterative algorithms are rarely used for clinical routine studies because of their low availability and increased reconstruction time. We used Jini and a self-developed iterative reconstructions algorithm to design and implement a Jini reconstruction service. With this service, the physician selects the patient study from a database and a Jini client automatically discovers the registered Jini reconstruction services in the department's Intranet. After downloading the proxy object the this Jini service, the SPECT acquisition data are reconstructed. The resulting transaxial slices are visualized using a Jini slice viewer, which can be used for various imaging modalities.

Efficient conservative ADER schemes based on WENO reconstruction and space-time predictor in primitive variables

Science.gov (United States)

Zanotti, Olindo; Dumbser, Michael

2016-01-01

We present a new version of conservative ADER-WENO finite volume schemes, in which both the high order spatial reconstruction as well as the time evolution of the reconstruction polynomials in the local space-time predictor stage are performed in primitive variables, rather than in conserved ones. To obtain a conservative method, the underlying finite volume scheme is still written in terms of the cell averages of the conserved quantities. Therefore, our new approach performs the spatial WENO reconstruction twice: the first WENO reconstruction is carried out on the known cell averages of the conservative variables. The WENO polynomials are then used at the cell centers to compute point values of the conserved variables, which are subsequently converted into point values of the primitive variables. This is the only place where the conversion from conservative to primitive variables is needed in the new scheme. Then, a second WENO reconstruction is performed on the point values of the primitive variables to obtain piecewise high order reconstruction polynomials of the primitive variables. The reconstruction polynomials are subsequently evolved in time with a novel space-time finite element predictor that is directly applied to the governing PDE written in primitive form. The resulting space-time polynomials of the primitive variables can then be directly used as input for the numerical fluxes at the cell boundaries in the underlying conservative finite volume scheme. Hence, the number of necessary conversions from the conserved to the primitive variables is reduced to just one single conversion at each cell center. We have verified the validity of the new approach over a wide range of hyperbolic systems, including the classical Euler equations of gas dynamics, the special relativistic hydrodynamics (RHD) and ideal magnetohydrodynamics (RMHD) equations, as well as the Baer-Nunziato model for compressible two-phase flows. In all cases we have noticed that the new ADER

Fast heat flux modulation at the nanoscale

OpenAIRE

van Zwol, P. J.; Joulain, K.; Abdallah, P. Ben; Greffet, J. J.; Chevrier, J.

2011-01-01

We introduce a new concept for electrically controlled heat flux modulation. A flux contrast larger than 10 dB is expected with switching time on the order of tens of nanoseconds. Heat flux modulation is based on the interplay between radiative heat transfer at the nanoscale and phase change materials. Such large contrasts are not obtainable in solids, or in far field. As such this opens up new horizons for temperature modulation and actuation at the nanoscale.

Sunward-propagating Solar Energetic Electrons inside Multiple Interplanetary Flux Ropes

Energy Technology Data Exchange (ETDEWEB)

Gómez-Herrero, Raúl; Hidalgo, Miguel A.; Carcaboso, Fernando; Blanco, Juan J. [Dpto. de Física y Matemáticas, Universidad de Alcalá, E-28871 Alcalá de Henares, Madrid (Spain); Dresing, Nina; Klassen, Andreas; Heber, Bernd [Institut für Experimentelle und Angewandte Physik, University of Kiel, D-24118, Kiel (Germany); Temmer, Manuela; Veronig, Astrid [Institute of Physics/Kanzelhöhe Observatory, University of Graz, A-8010 Graz (Austria); Bučík, Radoslav [Institut für Astrophysik, Georg-August-Universität Göttingen, D-37077, Göttingen (Germany); Lario, David, E-mail: raul.gomezh@uah.es [The Johns Hopkins University, Applied Physics Laboratory, Laurel, MD 20723 (United States)

2017-05-10

On 2013 December 2 and 3, the SEPT and STE instruments on board STEREO-A observed two solar energetic electron events with unusual sunward-directed fluxes. Both events occurred during a time interval showing typical signatures of interplanetary coronal mass ejections (ICMEs). The electron timing and anisotropies, combined with extreme-ultraviolet solar imaging and radio wave spectral observations, are used to confirm the solar origin and the injection times of the energetic electrons. The solar source of the ICME is investigated using remote-sensing observations and a three-dimensional reconstruction technique. In situ plasma and magnetic field data combined with energetic electron observations and a flux-rope model are used to determine the ICME magnetic topology and the interplanetary electron propagation path from the Sun to 1 au. Two consecutive flux ropes crossed the STEREO-A location and each electron event occurred inside a different flux rope. In both cases, the electrons traveled from the solar source to 1 au along the longest legs of the flux ropes still connected to the Sun. During the December 2 event, energetic electrons propagated along the magnetic field, while during the December 3 event they were propagating against the field. As found by previous studies, the energetic electron propagation times are consistent with a low number of field line rotations N < 5 of the flux rope between the Sun and 1 au. The flux rope model used in this work suggests an even lower number of rotations.

Seasonality of Overstory and Understory Fluxes in a Semi-Arid Oak Savanna: What can be Learned from Comparing Measured and Modeled Fluxes?

Science.gov (United States)

Raz-Yaseef, N.; Sonnentag, O.; Kobayashi, H.; Chen, J. M.; Verfaillie, J. G.; Ma, S.; Baldocchi, D. D.

2011-12-01

Semi-arid climates experience large seasonal and inter-annual variability in radiation and precipitation, creating natural conditions adequate to study how year-to-year changes affect atmosphere-biosphere fluxes. Especially, savanna ecosystems, that combine tree and below-canopy components, create a unique environment in which phenology dramatically changes between seasons. We used a 10-year flux database in order to define seasonal and interannual variability of climatic inputs and fluxes, and evaluate model capability to reproduce observed variability. This is based on the perception that model capability to construct the deviation, and not the average, is important in order to correctly predict ecosystem sensitivity to climate change. Our research site is a low density and low LAI (0.8) semi-arid savanna, located at Tonzi Ranch, Northern California. In this system, trees are active during the warm season (Mar - Oct), and grasses are active during the wet season (Dec - May). Measurements of carbon and water fluxes above and below the tree canopy using eddy covariance and supplementary measurements have been made since 2001. Fluxes were simulated using bio-meteorological process-oriented ecosystem models: BEPS and 3D-CAONAK. Models were partly capable of reproducing fluxes on daily scales (R2=0.66). We then compared model outputs for different ecosystem components and seasons, and found distinct seasons with high correlations while other seasons were purely represented. Comparison was much higher for ET than for GPP. The understory was better simulated than the overstory. CANOAK overestimated spring understory fluxes, probably due to the capability to directly calculated 3D radiative transfer. BEPS underestimated spring understory fluxes, following the pre-description of grass die-off. Both models underestimated peak spring overstory fluxes. During winter tree dormant, modeled fluxes were null, but occasional high fluxes of both ET and GPP were measured following

Research on reconstruction of steel tube section from few projections

International Nuclear Information System (INIS)

Peng Shuaijun; Wu Haifeng; Wang Kai

2007-01-01

Most parameters of steel tube can be acquired from CT image of the section so as to evaluate its quality. But large numbers of projections are needed in order to reconstruct the section image, so the collection and calculation of the projections consume lots of time. In order to solve the problem, reconstruction algorithms of steel tube from few projections are researched and the results are validated with simulation data in the paper. Three iterative algorithms, ART, MAP and OSEM, are attempted to reconstruct the section of steel tube by using the simulation model. Considering the prior information distributing of steel tube, we improve the algorithms and get better reconstruction images. The results of simulation experiment indicate that ART, MAP and OSEM can reconstruct accurate section images of steel tube from less than 20 projections and approximate images from 10 projections. (authors)

Muon reconstruction in the Daya Bay water pools

International Nuclear Information System (INIS)

Hackenburg, R. W.

2017-01-01

Muon reconstruction in the Daya Bay water pools would serve to verify the simulated muon fluxes and offer the possibility of studying cosmic muons in general. This reconstruction is, however, complicated by many optical obstacles and the small coverage of photomultiplier tubes (PMTs) as compared to other large water Cherenkov detectors. The PMTs’ timing information is useful only in the case of direct, unreflected Cherenkov light. This requires PMTs to be added and removed as an hypothesized muon trajectory is iteratively improved, to account for the changing effects of obstacles and direction of light. Therefore, muon reconstruction in the Daya Bay water pools does not lend itself to a general fitting procedure employing smoothly varying functions with continuous derivatives. Here, we describe an algorithm which overcomes these complications. It employs the method of Least Mean Squares to determine an hypothesized trajectory from the PMTs’ charge-weighted positions. This initially hypothesized trajectory is then iteratively refined using the PMTs’ timing information. Reconstructions with simulated data reproduce the simulated trajectory to within about 5° in direction and about 45 cm in position at the pool surface, with a bias that tends to pull tracks away from the vertical by about 3°.

Study of the ANTARES detector sensitivity to a diffuse high-energy cosmic neutrino flux; Etude de la sensibilite du detecteur ANTARES a un flux diffus de neutrinos cosmiques de haute energie

Energy Technology Data Exchange (ETDEWEB)

Romeyer, A

2003-04-01

The ANTARES collaboration aims to built an underwater neutrino telescope, 2 400 m deep, 40 km from Toulon (France). This detector is constituted by 12 strings, each one comprising 90 photomultipliers. Neutrinos are detected through their charged current interaction in the medium surrounding the detector (water or rock) leading to the production of a muon in the final state. Its Cherenkov light emitted all along its travel is detected by a three dimensional array of photomultipliers. The diffuse neutrino flux is constituted by the addition of the neutrino emission of sources. Only astrophysical ones have been discussed. The different theoretical models predicting such a flux have been listed and added to the simulation possibilities. As the muon energy reconstruction was a crucial parameter in this analysis, a new energy estimator has been developed. It gives a resolution of a factor three on the muon energy above 1 TeV. Discriminant variables have been also developed in order to reject the atmospheric muon background. Including all these developments, the ANTARES sensitivity is found to be around 8.10{sup -8} GeV-cm{sup -2}-s{sup -1}-sr{sup -1} after one year of data taking for an E{sup -2} spectrum and a 10 string detector. (author)

Multichannel algorithm for fast 3D reconstruction

International Nuclear Information System (INIS)

Rodet, Thomas; Grangeat, Pierre; Desbat, Laurent

2002-01-01

Some recent medical imaging applications such as functional imaging (PET and SPECT) or interventional imaging (CT fluoroscopy) involve increasing amounts of data. In order to reduce the image reconstruction time, we develop a new fast 3D reconstruction algorithm based on a divide and conquer approach. The proposed multichannel algorithm performs an indirect frequential subband decomposition of the image f to be reconstructed (f=Σf j ) through the filtering of the projections Rf. The subband images f j are reconstructed on a downsampled grid without information suppression. In order to reduce the computation time, we do not backproject the null filtered projections and we downsample the number of projections according to the Shannon conditions associated with the subband image. Our algorithm is based on filtering and backprojection operators. Using the same algorithms for these basic operators, our approach is three and a half times faster than a classical FBP algorithm for a 2D image 512x512 and six times faster for a 3D image 32x512x512. (author)

Lower limb edema after arterial reconstruction, a comparison with lymph, reconstruction and DVT edema by RI scintigram

International Nuclear Information System (INIS)

Ojiro, M.; Takenosita, M.; Toshinaga, R.; Shimazu, H.; Nakajo, M.; Iwasita, S.

1991-01-01

Postoperative lower limb edema after arterial-reconstruction is common complication. However the precise mechanism of this process is not fully understood. In order to investigate this pathogenesis, it was studied whether the postoperative edema was affected by the various types of reconstruction, the materials, the degree of preoperative ischemia and the grade of improvement of ankle pressure index (API) after reconstruction retrospectively. Furthermore, by pertechnetate anion the difference of scintigraph pattern was studied in the lower limb and was compared with postoperative edema, lymph edema and acute deep vein thrombosis (DVT) with swelling limb. (author). 4 refs.; 2 figs

Principles of Periocular Reconstruction following Excision of Cutaneous Malignancy

International Nuclear Information System (INIS)

Hayano, S. M.; Whipple, K. M.; Korn, B. S.; Kikkawa, D. O.

2012-01-01

Reconstruction of periocular defects following excision of cutaneous malignancy can present difficulties for oculofacial and reconstructive surgeons. The intricate anatomy of the eyelids and face requires precise restoration in order to avoid postoperative functional anesthetic concerns. Various reconstructive procedures based on common principles, location and size of the defect, can be applied to achieve restoration with the best possible functional and aesthetic outcomes.

A clinical perspective of accelerated statistical reconstruction

International Nuclear Information System (INIS)

Hutton, B.F.; Hudson, H.M.; Beekman, F.J.

1997-01-01

Although the potential benefits of maximum likelihood reconstruction have been recognised for many years, the technique has only recently found widespread popularity in clinical practice. Factors which have contributed to the wider acceptance include improved models for the emission process, better understanding of the properties of the algorithm and, not least, the practicality of application with the development of acceleration schemes and the improved speed of computers. The objective in this article is to present a framework for applying maximum likelihood reconstruction for a wide range of clinically based problems. The article draws particularly on the experience of the three authors in applying an acceleration scheme involving use of ordered subsets to a range of applications. The potential advantages of statistical reconstruction techniques include: (a) the ability to better model the emission and detection process, in order to make the reconstruction converge to a quantitative image, (b) the inclusion of a statistical noise model which results in better noise characteristics, and (c) the possibility to incorporate prior knowledge about the distribution being imaged. The great flexibility in adapting the reconstruction for a specific model results in these techniques having wide applicability to problems in clinical nuclear medicine. (orig.). With 8 figs., 1 tab

Diamagnetic flux measurement in Aditya tokamak

International Nuclear Information System (INIS)

Kumar, Sameer; Jha, Ratneshwar; Lal, Praveen; Hansaliya, Chandresh; Gopalkrishna, M. V.; Kulkarni, Sanjay; Mishra, Kishore

2010-01-01

Measurements of diamagnetic flux in Aditya tokamak for different discharge conditions are reported for the first time. The measured diamagnetic flux in a typical discharge is less than 0.6 mWb and therefore it has required careful compensation for various kinds of pick-ups. The hardware and software compensations employed in this measurement are described. We introduce compensation of a pick-up due to plasma current of less than 20 kA in short duration discharges, in which plasma pressure gradient is supposed to be negligible. The flux measurement during radio frequency heating is also presented in order to validate compensation.

An Algorithm for Induction Motor Stator Flux Estimation

Directory of Open Access Journals (Sweden)

STOJIC, D. M.

2012-08-01

Full Text Available A new method for the induction motor stator flux estimation used in the sensorless IM drive applications is presented in this paper. Proposed algorithm advantageously solves problems associated with the pure integration, commonly used for the stator flux estimation. An observer-based structure is proposed based on the stator flux vector stationary state, in order to eliminate the undesired DC offset component present in the integrator based stator flux estimates. By using a set of simulation runs it is shown that the proposed algorithm enables the DC-offset free stator flux estimated for both low and high stator frequency induction motor operation.

Critical flux determination by flux-stepping

DEFF Research Database (Denmark)

Beier, Søren; Jonsson, Gunnar Eigil

2010-01-01

In membrane filtration related scientific literature, often step-by-step determined critical fluxes are reported. Using a dynamic microfiltration device, it is shown that critical fluxes determined from two different flux-stepping methods are dependent upon operational parameters such as step...... length, step height, and.flux start level. Filtrating 8 kg/m(3) yeast cell suspensions by a vibrating 0.45 x 10(-6) m pore size microfiltration hollow fiber module, critical fluxes from 5.6 x 10(-6) to 1.2 x 10(-5) m/s have been measured using various step lengths from 300 to 1200 seconds. Thus......, such values are more or less useless in itself as critical flux predictors, and constant flux verification experiments have to be conducted to check if the determined critical fluxes call predict sustainable flux regimes. However, it is shown that using the step-by-step predicted critical fluxes as start...

Using the SAND-II and MLM methods to reconstruct fast neutron spectra

International Nuclear Information System (INIS)

Bondars, Kh.Ya.; Kamnev, V.A.; Lapenas, A.A.; Troshin, V.S.

1981-01-01

The reconstruction of fast neutron spectra from measured reaction rates may be reduced to the solution of Fredholm's integral equation of the first kind. This problem falls in the category of incorrectly formulated problems, and so additional information is required concerning the unknown function i.e. concerning the differential energy dependence of the neutron, flux density sup(phi)(E). There are various methods for seeking a solution to the problem as formulated above. One of the best-known methods used in the USSR is the maximum likelihood method (MLM) (or directional difference method (DDM)), whereas SAND-II is commonly used abroad. The purpose of this paper is to compare the MLM and SAND-II methods, taking as an example the processing of measurement data which were obtained in the B-2 beam line at the BR-10 reactor in order to determine the composition of shielding for a fast reactor

In-situ observations of flux ropes formed in association with a pair of spiral nulls in magnetotail plasmas

Energy Technology Data Exchange (ETDEWEB)

Guo, Ruilong; Xie, Lun; He, Jiansen [School of Earth and Space Sciences, Peking University, Beijing 100871 (China); Pu, Zuyin; Fu, Suiyan [School of Earth and Space Sciences, Peking University, Beijing 100871 (China); PKU/UCLA Joint Research Institute in Science and Engineering, Peking University, Beijing (China); Chen, Li-Jen [NASA Goddard Space Flight Center, Greenbelt, Maryland 20771 (United States); Wang, Xiaogang [Harbin Institute of Technology, Harbin 150001 (China); Dunlop, Malcolm [School of Astronautics, Beihang University, Beijing 100191 (China); RAL Space, Rutherford Appleton Laboratory, STFC, Didcot OX11 0QX (United Kingdom); Bogdanova, Yulia V. [RAL Space, Rutherford Appleton Laboratory, STFC, Didcot OX11 0QX (United Kingdom); Yao, Zhonghua; Fazakerley, Andrew N. [UCL Mullard Space Science Laboratory, Dorking RH5 6NT (United Kingdom); Xiao, Chijie [School of Physics, Peking University, Beijing 100871 (China)

2016-05-15

Signatures of secondary islands are frequently observed in the magnetic reconnection regions of magnetotail plasmas. In this paper, magnetic structures with the secondary-island signatures observed by Cluster are reassembled by a fitting-reconstruction method. The results show three-dimensionally that a secondary island event can manifest the flux rope formed with an A{sub s}-type null and a B{sub s}-type null paired via their spines. We call this A{sub s}-spine-B{sub s}-like configuration the helically wrapped spine model. The reconstructed field lines wrap around the spine to form the flux rope, and an O-type topology is therefore seen on the plane perpendicular to the spine. Magnetized electrons are found to rotate on and cross the fan surface, suggesting that both the torsional-spine and the spine-fan reconnection take place in the configuration. Furthermore, detailed analysis implies that the spiral nulls and flux ropes were locally generated nearby the spacecraft in the reconnection outflow region, indicating that secondary reconnection may occur in the exhaust away from the primary reconnection site.

In-situ observations of flux ropes formed in association with a pair of spiral nulls in magnetotail plasmas

International Nuclear Information System (INIS)

Guo, Ruilong; Xie, Lun; He, Jiansen; Pu, Zuyin; Fu, Suiyan; Chen, Li-Jen; Wang, Xiaogang; Dunlop, Malcolm; Bogdanova, Yulia V.; Yao, Zhonghua; Fazakerley, Andrew N.; Xiao, Chijie

2016-01-01

Signatures of secondary islands are frequently observed in the magnetic reconnection regions of magnetotail plasmas. In this paper, magnetic structures with the secondary-island signatures observed by Cluster are reassembled by a fitting-reconstruction method. The results show three-dimensionally that a secondary island event can manifest the flux rope formed with an A_s-type null and a B_s-type null paired via their spines. We call this A_s-spine-B_s-like configuration the helically wrapped spine model. The reconstructed field lines wrap around the spine to form the flux rope, and an O-type topology is therefore seen on the plane perpendicular to the spine. Magnetized electrons are found to rotate on and cross the fan surface, suggesting that both the torsional-spine and the spine-fan reconnection take place in the configuration. Furthermore, detailed analysis implies that the spiral nulls and flux ropes were locally generated nearby the spacecraft in the reconnection outflow region, indicating that secondary reconnection may occur in the exhaust away from the primary reconnection site.

Principles of Periocular Reconstruction following Excision of Cutaneous Malignancy

Directory of Open Access Journals (Sweden)

Scott M. Hayano

2012-01-01

Full Text Available Reconstruction of periocular defects following excision of cutaneous malignancy can present difficulties for oculofacial and reconstructive surgeons. The intricate anatomy of the eyelids and face requires precise restoration in order to avoid postoperative functional anesthetic concerns. Various reconstructive procedures based on common principles, location and size of the defect, can be applied to achieve restoration with the best possible functional and aesthetic outcomes.

Class of reconstructed discontinuous Galerkin methods in computational fluid dynamics

International Nuclear Information System (INIS)

Luo, Hong; Xia, Yidong; Nourgaliev, Robert

2011-01-01

A class of reconstructed discontinuous Galerkin (DG) methods is presented to solve compressible flow problems on arbitrary grids. The idea is to combine the efficiency of the reconstruction methods in finite volume methods and the accuracy of the DG methods to obtain a better numerical algorithm in computational fluid dynamics. The beauty of the resulting reconstructed discontinuous Galerkin (RDG) methods is that they provide a unified formulation for both finite volume and DG methods, and contain both classical finite volume and standard DG methods as two special cases of the RDG methods, and thus allow for a direct efficiency comparison. Both Green-Gauss and least-squares reconstruction methods and a least-squares recovery method are presented to obtain a quadratic polynomial representation of the underlying linear discontinuous Galerkin solution on each cell via a so-called in-cell reconstruction process. The devised in-cell reconstruction is aimed to augment the accuracy of the discontinuous Galerkin method by increasing the order of the underlying polynomial solution. These three reconstructed discontinuous Galerkin methods are used to compute a variety of compressible flow problems on arbitrary meshes to assess their accuracy. The numerical experiments demonstrate that all three reconstructed discontinuous Galerkin methods can significantly improve the accuracy of the underlying second-order DG method, although the least-squares reconstructed DG method provides the best performance in terms of both accuracy, efficiency, and robustness. (author)

An A Posteriori Error Analysis of Mixed Finite Element Galerkin Approximations to Second Order Linear Parabolic Problems

KAUST Repository

Memon, Sajid; Nataraj, Neela; Pani, Amiya Kumar

2012-01-01

In this article, a posteriori error estimates are derived for mixed finite element Galerkin approximations to second order linear parabolic initial and boundary value problems. Using mixed elliptic reconstructions, a posteriori error estimates in L∞(L2)- and L2(L2)-norms for the solution as well as its flux are proved for the semidiscrete scheme. Finally, based on a backward Euler method, a completely discrete scheme is analyzed and a posteriori error bounds are derived, which improves upon earlier results on a posteriori estimates of mixed finite element approximations to parabolic problems. Results of numerical experiments verifying the efficiency of the estimators have also been provided. © 2012 Society for Industrial and Applied Mathematics.

The structure of an earthward propagating magnetic flux rope early in its evolution: comparison of methods

Directory of Open Access Journals (Sweden)

C. Möstl

2009-05-01

Full Text Available We analyze a magnetic signature associated with the leading edge of a bursty bulk flow observed by Cluster at −19 RE downtail on 22 August 2001. A distinct rotation of the magnetic field was seen by all four spacecraft. This event was previously examined by Slavin et al. (2003b using both linear force-free modeling as well as a curlometer technique. Extending this work, we apply here single- and multi-spacecraft Grad-Shafranov (GS reconstruction techniques to the Cluster observations and find good evidence that the structure encountered is indeed a magnetic flux rope and contains helical magnetic field lines. We find that the flux rope has a diameter of approximately 1 RE, an axial field of 26.4 nT, a velocity of ≈650 km/s, a total axial current of 0.16 MA and magnetic fluxes of order 105 Wb. The field line twist is estimated as half a turn per RE. The invariant axis is inclined at 40° to the ecliptic plane and 10° to the GSM equatorial plane. The flux rope has a force-free core and non-force-free boundaries. When we compare and contrast our results with those obtained from minimum variance, single-spacecraft force-free fitting and curlometer techniques, we find in general fair agreement, but also clear differences such as a higher inclination of the axis to the ecliptic. We further conclude that single-spacecraft methods have limitations which should be kept in mind when applied to THEMIS observations, and that non-force-free GS and curlometer techniques are to be preferred in their analysis. Some properties we derived for this earthward– moving structure are similar to those inferred by Lui et al. (2007, using a different approach, for a tailward-moving flux rope observed during the expansion phase of the same substorm.

Characterization of a detector chain using a FPGA-based time-to-digital converter to reconstruct the three-dimensional coordinates of single particles at high flux

Science.gov (United States)

Nogrette, F.; Heurteau, D.; Chang, R.; Bouton, Q.; Westbrook, C. I.; Sellem, R.; Clément, D.

2015-11-01

We report on the development of a novel FPGA-based time-to-digital converter and its implementation in a detection chain that records the coordinates of single particles along three dimensions. The detector is composed of micro-channel plates mounted on top of a cross delay line and connected to fast electronics. We demonstrate continuous recording of the timing signals from the cross delay line at rates up to 4.1 × 106 s-1 and three-dimensional reconstruction of the coordinates up to 3.2 × 106 particles per second. From the imaging of a calibrated structure we measure the in-plane resolution of the detector to be 140(20) μm at a flux of 3 × 105 particles per second. In addition, we analyze a method to estimate the resolution without placing any structure under vacuum, a significant practical improvement. While we use UV photons here, the results of this work apply to the detection of other kinds of particles.

Hybrid spectral CT reconstruction.

Directory of Open Access Journals (Sweden)

Darin P Clark

Full Text Available Current photon counting x-ray detector (PCD technology faces limitations associated with spectral fidelity and photon starvation. One strategy for addressing these limitations is to supplement PCD data with high-resolution, low-noise data acquired with an energy-integrating detector (EID. In this work, we propose an iterative, hybrid reconstruction technique which combines the spectral properties of PCD data with the resolution and signal-to-noise characteristics of EID data. Our hybrid reconstruction technique is based on an algebraic model of data fidelity which substitutes the EID data into the data fidelity term associated with the PCD reconstruction, resulting in a joint reconstruction problem. Within the split Bregman framework, these data fidelity constraints are minimized subject to additional constraints on spectral rank and on joint intensity-gradient sparsity measured between the reconstructions of the EID and PCD data. Following a derivation of the proposed technique, we apply it to the reconstruction of a digital phantom which contains realistic concentrations of iodine, barium, and calcium encountered in small-animal micro-CT. The results of this experiment suggest reliable separation and detection of iodine at concentrations ≥ 5 mg/ml and barium at concentrations ≥ 10 mg/ml in 2-mm features for EID and PCD data reconstructed with inherent spatial resolutions of 176 μm and 254 μm, respectively (point spread function, FWHM. Furthermore, hybrid reconstruction is demonstrated to enhance spatial resolution within material decomposition results and to improve low-contrast detectability by as much as 2.6 times relative to reconstruction with PCD data only. The parameters of the simulation experiment are based on an in vivo micro-CT experiment conducted in a mouse model of soft-tissue sarcoma. Material decomposition results produced from this in vivo data demonstrate the feasibility of distinguishing two K-edge contrast agents with

Hybrid spectral CT reconstruction

Science.gov (United States)

Clark, Darin P.

2017-01-01

Current photon counting x-ray detector (PCD) technology faces limitations associated with spectral fidelity and photon starvation. One strategy for addressing these limitations is to supplement PCD data with high-resolution, low-noise data acquired with an energy-integrating detector (EID). In this work, we propose an iterative, hybrid reconstruction technique which combines the spectral properties of PCD data with the resolution and signal-to-noise characteristics of EID data. Our hybrid reconstruction technique is based on an algebraic model of data fidelity which substitutes the EID data into the data fidelity term associated with the PCD reconstruction, resulting in a joint reconstruction problem. Within the split Bregman framework, these data fidelity constraints are minimized subject to additional constraints on spectral rank and on joint intensity-gradient sparsity measured between the reconstructions of the EID and PCD data. Following a derivation of the proposed technique, we apply it to the reconstruction of a digital phantom which contains realistic concentrations of iodine, barium, and calcium encountered in small-animal micro-CT. The results of this experiment suggest reliable separation and detection of iodine at concentrations ≥ 5 mg/ml and barium at concentrations ≥ 10 mg/ml in 2-mm features for EID and PCD data reconstructed with inherent spatial resolutions of 176 μm and 254 μm, respectively (point spread function, FWHM). Furthermore, hybrid reconstruction is demonstrated to enhance spatial resolution within material decomposition results and to improve low-contrast detectability by as much as 2.6 times relative to reconstruction with PCD data only. The parameters of the simulation experiment are based on an in vivo micro-CT experiment conducted in a mouse model of soft-tissue sarcoma. Material decomposition results produced from this in vivo data demonstrate the feasibility of distinguishing two K-edge contrast agents with a spectral

Reconstructions of the sulfur-passivated InSb (100) surface

Energy Technology Data Exchange (ETDEWEB)

Ciochoń, Piotr, E-mail: piotr.ciochon@doctoral.uj.edu.pl; Olszowska, Natalia; Wróbel, Sonia; Kołodziej, Jacek

2017-04-01

Highlights: • Two new surface reconstructions of a S-passivated InSb (001) surface are reported. • The reconstructions are obtained through partial loss of surface sulfur. • They are characterized by the thickness of ∼4 Å and good crystallographic ordering. • The reconstructions provide adequate electronic passivation of the surface. - Abstract: We have studied the properties of the InSb (100) surface passivated with sulfur dimers emitted by the solid-state electrochemical cell in ultra-high vacuum. Annealing the passivated surface in the temperature equal to T = 326 °C led to the formation of the c(4 × 8) surface reconstruction, while increasing the temperature to T = 348 °C resulted in the transition to c(4 × 12) reconstruction. To the best of our knowledge these reconstructions have not been reported to date and are characterized by the exceptionally good crystallographic order. XPS studies revealed that there are at least 4 different chemical species of sulfur present on the surface and the estimated thickness of the sulfur layers is equal to around 4 Å. The surface reconstructions are characterized by the lowered intensity of the surface electronic states and resonances near the Fermi level, compared to the clean InSb surface, making them potentially very useful for the fabrication of InSb-based electronic and optoelectronic devices.

A multiscale mortar multipoint flux mixed finite element method

KAUST Repository

Wheeler, Mary Fanett; Xue, Guangri; Yotov, Ivan

2012-01-01

In this paper, we develop a multiscale mortar multipoint flux mixed finite element method for second order elliptic problems. The equations in the coarse elements (or subdomains) are discretized on a fine grid scale by a multipoint flux mixed finite

A volume of fluid method based on multidimensional advection and spline interface reconstruction

International Nuclear Information System (INIS)

Lopez, J.; Hernandez, J.; Gomez, P.; Faura, F.

2004-01-01

A new volume of fluid method for tracking two-dimensional interfaces is presented. The method involves a multidimensional advection algorithm based on the use of edge-matched flux polygons to integrate the volume fraction evolution equation, and a spline-based reconstruction algorithm. The accuracy and efficiency of the proposed method are analyzed using different tests, and the results are compared with those obtained recently by other authors. Despite its simplicity, the proposed method represents a significant improvement, and compares favorably with other volume of fluid methods as regards the accuracy and efficiency of both the advection and reconstruction steps

Reconstructing warm inflation

Science.gov (United States)

Herrera, Ramón

2018-03-01

The reconstruction of a warm inflationary universe model from the scalar spectral index n_S(N) and the tensor to scalar ratio r( N) as a function of the number of e-folds N is studied. Under a general formalism we find the effective potential and the dissipative coefficient in terms of the cosmological parameters n_S and r considering the weak and strong dissipative stages under the slow roll approximation. As a specific example, we study the attractors for the index n_S given by nS-1∝ N^{-1} and for the ratio r∝ N^{-2}, in order to reconstruct the model of warm inflation. Here, expressions for the effective potential V(φ ) and the dissipation coefficient Γ (φ ) are obtained.

The measurements of thermal neutron flux distribution in a paraffin

Indian Academy of Sciences (India)

The term `thermal flux' implies a Maxwellian distribution of velocity and energy corresponding to the most probable velocity of 2200 ms-1 at 293.4 K. In order to measure the thermal neutron flux density, the foil activation method was used. Thermal neutron flux determination in paraffin phantom by counting the emitted rays of ...

Inverse Monte Carlo: a unified reconstruction algorithm for SPECT

International Nuclear Information System (INIS)

Floyd, C.E.; Coleman, R.E.; Jaszczak, R.J.

1985-01-01

Inverse Monte Carlo (IMOC) is presented as a unified reconstruction algorithm for Emission Computed Tomography (ECT) providing simultaneous compensation for scatter, attenuation, and the variation of collimator resolution with depth. The technique of inverse Monte Carlo is used to find an inverse solution to the photon transport equation (an integral equation for photon flux from a specified source) for a parameterized source and specific boundary conditions. The system of linear equations so formed is solved to yield the source activity distribution for a set of acquired projections. For the studies presented here, the equations are solved using the EM (Maximum Likelihood) algorithm although other solution algorithms, such as Least Squares, could be employed. While the present results specifically consider the reconstruction of camera-based Single Photon Emission Computed Tomographic (SPECT) images, the technique is equally valid for Positron Emission Tomography (PET) if a Monte Carlo model of such a system is used. As a preliminary evaluation, experimentally acquired SPECT phantom studies for imaging Tc-99m (140 keV) are presented which demonstrate the quantitative compensation for scatter and attenuation for a two dimensional (single slice) reconstruction. The algorithm may be expanded in a straight forward manner to full three dimensional reconstruction including compensation for out of plane scatter

Integration of expression data in genome-scale metabolic network reconstructions

Directory of Open Access Journals (Sweden)

Anna S. Blazier

2012-08-01

Full Text Available With the advent of high-throughput technologies, the field of systems biology has amassed an abundance of omics data, quantifying thousands of cellular components across a variety of scales, ranging from mRNA transcript levels to metabolite quantities. Methods are needed to not only integrate this omics data but to also use this data to heighten the predictive capabilities of computational models. Several recent studies have successfully demonstrated how flux balance analysis (FBA, a constraint-based modeling approach, can be used to integrate transcriptomic data into genome-scale metabolic network reconstructions to generate predictive computational models. In this review, we summarize such FBA-based methods for integrating expression data into genome-scale metabolic network reconstructions, highlighting their advantages as well as their limitations.

Developments on jet reconstruction by DELPHI

CERN Document Server

Kiskinen, A

2002-01-01

The most relevant techniques used by DELPHI to identify jets in multihadronic final states are reviewed. The performance of jet reconstruction algorithms is analysed together with the additional use of energy and momentum conservation in order to allow for a precise reconstruction of the event kinematics. Also jet flavour tagging methods are summarised. Applications in some analyses like searches for new particles such as Higgs bosons, W mass physics and QCD studies are presented. (9 refs).

Radiation source reconstruction with known geometry and materials using the adjoint

International Nuclear Information System (INIS)

Hykes, Joshua M.; Azmy, Yousry Y.

2011-01-01

We present a method to estimate an unknown isotropic source distribution, in space and energy, using detector measurements when the geometry and material composition are known. The estimated source distribution minimizes the difference between the measured and computed responses of detectors located at a selected number of points within the domain. In typical methods, a forward flux calculation is performed for each source guess in an iterative process. In contrast, we use the adjoint flux to compute the responses. Potential applications of the proposed method include determining the distribution of radio-contaminants following a nuclear event, monitoring the flow of radioactive fluids in pipes to determine hold-up locations, and retroactive reconstruction of radiation fields using workers' detectors' readings. After presenting the method, we describe a numerical test problem to demonstrate the preliminary viability of the method. As expected, using the adjoint flux reduces the number of transport solves to be proportional to the number of detector measurements, in contrast to methods using the forward flux that require a typically larger number proportional to the number of spatial mesh cells. (author)

Uncertainties in (E)UV model atmosphere fluxes

Science.gov (United States)

Rauch, T.

2008-04-01

Context: During the comparison of synthetic spectra calculated with two NLTE model atmosphere codes, namely TMAP and TLUSTY, we encounter systematic differences in the EUV fluxes due to the treatment of level dissolution by pressure ionization. Aims: In the case of Sirius B, we demonstrate an uncertainty in modeling the EUV flux reliably in order to challenge theoreticians to improve the theory of level dissolution. Methods: We calculated synthetic spectra for hot, compact stars using state-of-the-art NLTE model-atmosphere techniques. Results: Systematic differences may occur due to a code-specific cutoff frequency of the H I Lyman bound-free opacity. This is the case for TMAP and TLUSTY. Both codes predict the same flux level at wavelengths lower than about 1500 Å for stars with effective temperatures (T_eff) below about 30 000 K only, if the same cutoff frequency is chosen. Conclusions: The theory of level dissolution in high-density plasmas, which is available for hydrogen only should be generalized to all species. Especially, the cutoff frequencies for the bound-free opacities should be defined in order to make predictions of UV fluxes more reliable.

Elliptic-cylindrical analytical flux-rope model for ICMEs

Science.gov (United States)

Nieves-Chinchilla, T.; Linton, M.; Hidalgo, M. A. U.; Vourlidas, A.

2016-12-01

We present an analytical flux-rope model for realistic magnetic structures embedded in Interplanetary Coronal Mass Ejections. The framework of this model was established by Nieves-Chinchilla et al. (2016) with the circular-cylindrical analytical flux rope model and under the concept developed by Hidalgo et al. (2002). Elliptic-cylindrical geometry establishes the first-grade of complexity of a series of models. The model attempts to describe the magnetic flux rope topology with distorted cross-section as a possible consequence of the interaction with the solar wind. In this model, the flux rope is completely described in the non-euclidean geometry. The Maxwell equations are solved using tensor calculus consistently with the geometry chosen, invariance along the axial component, and with the only assumption of no radial current density. The model is generalized in terms of the radial dependence of the poloidal current density component and axial current density component. The misalignment between current density and magnetic field is studied in detail for the individual cases of different pairs of indexes for the axial and poloidal current density components. This theoretical analysis provides a map of the force distribution inside of the flux-rope. The reconstruction technique has been adapted to the model and compared with in situ ICME set of events with different in situ signatures. The successful result is limited to some cases with clear in-situ signatures of distortion. However, the model adds a piece in the puzzle of the physical-analytical representation of these magnetic structures. Other effects such as axial curvature, expansion and/or interaction could be incorporated in the future to fully understand the magnetic structure. Finally, the mathematical formulation of this model opens the door to the next model: toroidal flux rope analytical model.

Ultra-Fast Image Reconstruction of Tomosynthesis Mammography Using GPU.

Science.gov (United States)

Arefan, D; Talebpour, A; Ahmadinejhad, N; Kamali Asl, A

2015-06-01

Digital Breast Tomosynthesis (DBT) is a technology that creates three dimensional (3D) images of breast tissue. Tomosynthesis mammography detects lesions that are not detectable with other imaging systems. If image reconstruction time is in the order of seconds, we can use Tomosynthesis systems to perform Tomosynthesis-guided Interventional procedures. This research has been designed to study ultra-fast image reconstruction technique for Tomosynthesis Mammography systems using Graphics Processing Unit (GPU). At first, projections of Tomosynthesis mammography have been simulated. In order to produce Tomosynthesis projections, it has been designed a 3D breast phantom from empirical data. It is based on MRI data in its natural form. Then, projections have been created from 3D breast phantom. The image reconstruction algorithm based on FBP was programmed with C++ language in two methods using central processing unit (CPU) card and the Graphics Processing Unit (GPU). It calculated the time of image reconstruction in two kinds of programming (using CPU and GPU).

Ultra-Fast Image Reconstruction of Tomosynthesis Mammography Using GPU

Directory of Open Access Journals (Sweden)

Arefan D

2015-06-01

Full Text Available Digital Breast Tomosynthesis (DBT is a technology that creates three dimensional (3D images of breast tissue. Tomosynthesis mammography detects lesions that are not detectable with other imaging systems. If image reconstruction time is in the order of seconds, we can use Tomosynthesis systems to perform Tomosynthesis-guided Interventional procedures. This research has been designed to study ultra-fast image reconstruction technique for Tomosynthesis Mammography systems using Graphics Processing Unit (GPU. At first, projections of Tomosynthesis mammography have been simulated. In order to produce Tomosynthesis projections, it has been designed a 3D breast phantom from empirical data. It is based on MRI data in its natural form. Then, projections have been created from 3D breast phantom. The image reconstruction algorithm based on FBP was programmed with C++ language in two methods using central processing unit (CPU card and the Graphics Processing Unit (GPU. It calculated the time of image reconstruction in two kinds of programming (using CPU and GPU.

Updated determination of the solar neutrino fluxes from solar neutrino data

Energy Technology Data Exchange (ETDEWEB)

Bergström, Johannes [Departament d’Estructura i Constituents de la Matèria and Institut de Ciencies del Cosmos,Universitat de Barcelona, Diagonal 647, E-08028 Barcelona (Spain); Gonzalez-Garcia, M. C. [Departament d’Estructura i Constituents de la Matèria and Institut de Ciencies del Cosmos,Universitat de Barcelona, Diagonal 647, E-08028 Barcelona (Spain); Institució Catalana de Recerca i Estudis Avançats (ICREA) (Spain); C.N. Yang Institute for Theoretical Physics,State University of New York at Stony Brook, Stony Brook, NY 11794-3840 (United States); Maltoni, Michele [Instituto de Física Teórica UAM/CSIC,Calle de Nicolás Cabrera 13-15, Universidad Autónoma de Madrid,Cantoblanco, E-28049 Madrid (Spain); Peña-Garay, Carlos [Instituto de Física Corpuscular (IFIC), CSIC and Universitat de Valencia,Calle Catedrático José Beltrán, 2, E-46090 Paterna, Valencia (Spain); Serenelli, Aldo M. [Institut de Ciencies de l’Espai (ICE-CSIC/IEEC),Campus UAB, Carrer de Can Magrans s/n, 08193 Cerdanyola del Valls (Spain); Song, Ningqiang [C.N. Yang Institute for Theoretical Physics,State University of New York at Stony Brook, Stony Brook, NY 11794-3840 (United States)

2016-03-18

We present an update of the determination of the solar neutrino fluxes from a global analysis of the solar and terrestrial neutrino data in the framework of three-neutrino mixing. Using a Bayesian analysis we reconstruct the posterior probability distribution function for the eight normalization parameters of the solar neutrino fluxes plus the relevant masses and mixing, with and without imposing the luminosity constraint. We then use these results to compare the description provided by different Standard Solar Models. Our results show that, at present, both models with low and high metallicity can describe the data with equivalent statistical agreement. We also argue that even with the present experimental precision the solar neutrino data have the potential to improve the accuracy of the solar model predictions.

On fully multidimensional and high order non oscillatory finite volume methods, I

International Nuclear Information System (INIS)

Lafon, F.

1992-11-01

A fully multidimensional flux formulation for solving nonlinear conservation laws of hyperbolic type is introduced to perform calculations on unstructured grids made of triangular or quadrangular cells. Fluxes are computed across dual median cells with a multidimensional 2D Riemann Solver (R2D Solver) whose intermediate states depend on either a three (on triangle R2DT solver) of four (on quadrangle, R2DQ solver) state solutions prescribed on the three or four sides of a gravity cell. Approximate Riemann solutions are computed via a linearization process of Roe's type involving multidimensional effects. Moreover, a monotonous scheme using stencil and central Lax-Friedrichs corrections on sonic curves are built in. Finally, high order accurate ENO-like (Essentially Non Oscillatory) reconstructions using plane and higher degree polynomial limitations are defined in the set up of finite element Lagrange spaces P k and Q k for k≥0, on triangles and quadrangles, respectively. Numerical experiments involving both linear and nonlinear conservation laws to be solved on unstructured grids indicate the ability of our techniques when dealing with strong multidimensional effects. An application to Euler's equations for the Mach three step problem illustrates the robustness and usefulness of our techniques using triangular and quadrangular grids. (Author). 33 refs., 13 figs

On Reconstruction of a Matrix by Its Minors

Science.gov (United States)

Akhtyamov, Azamat; Amram, Meirav; Mouftakhov, Artour

2018-01-01

In this paper, we reconstruct matrices from their minors, and give explicit formulas for the reconstruction of matrices of orders 2 × 3, 2 × 4, 2 × n, 3 × 6 and m × n. We also formulate the Plücker relations, which are the conditions of the existence of a matrix related to its given minors.

Reconstruction of the midface and maxilla.

Science.gov (United States)

Dalgorf, Dustin; Higgins, Kevin

2008-08-01

To review the current classification systems and reconstructive options available for restoration of maxillectomy defects. Defects involving the midface can have a great functional and aesthetic impact on the patient. Adequate restoration of the complex three-dimensional maxillary structure is required to replace form and function of the native tissue. An in-depth discussion of appropriate recipient vessel selection and reconstructive options are included in this article. The superficial temporal vessel system is presented as a reliable anastomosis site for restoration of midfacial defects. In addition, the complications of vein grafting, arteriovenous fistula loops and alternative recipient vessels sites are addressed to manage the challenge of the vessel-depleted neck. The current indications, advantages and disadvantages of local, regional and free-flap reconstructive options available for maxillectomy defects are highlighted in order to aid the surgeon in appropriate flap selection. A myriad of reconstructive options are available to restore maxillectomy defects. The surgeon must consider each defect and the needs of the individual patient when choosing the best suited reconstructive technique.

Flux canceling in three-dimensional radiative magnetohydrodynamic simulations

Science.gov (United States)

Thaler, Irina; Spruit, H. C.

2017-05-01

We aim to study the processes involved in the disappearance of magnetic flux between regions of opposite polarity on the solar surface using realistic three-dimensional (3D) magnetohydrodynamic (MHD) simulations. "Retraction" below the surface driven by magnetic forces is found to be a very effective mechanism of flux canceling of opposite polarities. The speed at which flux disappears increases strongly with initial mean flux density. In agreement with existing inferences from observations we suggest that this is a key process of flux disappearance within active complexes. Intrinsic kG strength concentrations connect the surface to deeper layers by magnetic forces, and therefore the influence of deeper layers on the flux canceling process is studied. We do this by comparing simulations extending to different depths. For average flux densities of 50 G, and on length scales on the order of 3 Mm in the horizontal and 10 Mm in depth, deeper layers appear to have only a mild influence on the effective rate of diffusion.

From COS ecosystem fluxes to GPP: integrating soil, branch and ecosystem fluxes.

Science.gov (United States)

Kooijmans, L.; Maseyk, K. S.; Vesala, T.; Mammarella, I.; Baker, I. T.; Seibt, U.; Sun, W.; Aalto, J.; Franchin, A.; Kolari, P.; Keskinen, H.; Levula, J.; Chen, H.

2016-12-01

The close coupling of Carbonyl Sulfide (COS) and CO2 due to a similar uptake pathway into plant stomata makes COS a promising new tracer that can potentially be used to partition the Net Ecosystem Exchange into gross primary production (GPP) and respiration. Although ecosystem-scale measurements have been made at several sites, the contribution of different ecosystem components to the total COS budget is often unknown. Besides that, the average Leaf Relative Uptake (LRU) ratio needs to be better determined to accurately translate COS ecosystem fluxes into GPP estimates when the simple linear correlation between GPP estimates and COS plant uptake is used. We performed two campaigns in the summer of 2015 and 2016 at the SMEAR II site in Hyytiälä, Finland to provide better constrained COS flux data for boreal forests. A combination of COS measurements were made during both years, i.e. atmospheric profile concentrations up to 125 m, eddy-covariance fluxes and soil chamber fluxes. In addition to these, branch chamber measurements were done in 2016 in an attempt to observe the LRU throughout the whole season. The LRU ratio shows an exponential correlation with photosynthetic active radiation (PAR) but is constant for PAR levels above 500 µmol m-2 s-1. Mid-day LRU values are 1.0 (aspen) and 1.5 (pine). The correlation between LRU and PAR can be explained by the fact that COS is hydrolyzed with the presence of the enzyme carbonic anhydrase, and is not light dependent, whereas the photosynthetic uptake of CO2 is. We observed nighttime fluxes on the order of 25-30 % of the daily maximum COS uptake. Soils are a small sink of COS and contribute to 3 % of the total ecosystem COS flux during daytime. In a comparison between observed and simulated fluxes from the Simple Biosphere (SiB) model, the modelled COS and CO2 ecosystem fluxes are on average 40 % smaller than the observed fluxes, however, the Ecosystem Relative Uptake (ERU) ratios are identical at a value of 1.9 ± 0

The concept of individualized anatomic anterior cruciate ligament (ACL) reconstruction

NARCIS (Netherlands)

Hofbauer, M.; Muller, B. [=Bart; Murawski, C. D.; van Eck, C. F.; Fu, F. H.

2014-01-01

To describe the concept of individualized anatomic anterior cruciate ligament (ACL) reconstruction. The PubMed/Medline database was searched using keywords pertaining to ACL reconstruction. Relevant articles were reviewed in order to summarize important concepts of individualized surgery in ACL

Hidden symmetry in the presence of fluxes

International Nuclear Information System (INIS)

Kubiznak, David; Warnick, Claude M.; Krtous, Pavel

2011-01-01

We derive the most general first-order symmetry operator for the Dirac equation coupled to arbitrary fluxes. Such an operator is given in terms of an inhomogeneous form ω which is a solution to a coupled system of first-order partial differential equations which we call the generalized conformal Killing-Yano system. Except trivial fluxes, solutions of this system are subject to additional constraints. We discuss various special cases of physical interest. In particular, we demonstrate that in the case of a Dirac operator coupled to the skew symmetric torsion and U(1) field, the system of generalized conformal Killing-Yano equations decouples into the homogeneous conformal Killing-Yano equations with torsion introduced in D. Kubiznak et al. (2009) and the symmetry operator is essentially the one derived in T. Houri et al. (2010) . We also discuss the Dirac field coupled to a scalar potential and in the presence of 5-form and 7-form fluxes.

Beard reconstruction: A surgical algorithm.

Science.gov (United States)

Ninkovic, M; Heidekrueger, P I; Ehrl, D; von Spiegel, F; Broer, P N

2016-06-01

Facial defects with loss of hair-bearing regions can be caused by trauma, infection, tumor excision, or burn injury. The presented analysis evaluates a series of different surgical approaches with a focus on male beard reconstruction, emphasizing the role of tissue expansion of regional and free flaps. Locoregional and free flap reconstructions were performed in 11 male patients with 14 facial defects affecting the hair-bearing bucco-mandibular or perioral region. In order to minimize donor-site morbidity and obtain large amounts of thin, pliable, hair-bearing tissue, pre-expansion was performed in five of 14 patients. Eight of 14 patients were treated with locoregional flap reconstructions and six with free flap reconstructions. Algorithms regarding pre- and intraoperative decision making are discussed and long-term (mean follow-up 1.5 years) results analyzed. Major complications, including tissue expander infection with the need for removal or exchange, partial or full flap loss, occurred in 0% (0/8) of patients with locoregional flaps and in 17% (1/6) of patients undergoing free flap reconstructions. Secondary refinement surgery was performed in 25% (2/8) of locoregional flaps and in 67% (4/6) of free flaps. Both locoregional and distant tissue transfers play a role in beard reconstruction, while pre-expansion remains an invaluable tool. Paying attention to the presented principles and considering the significance of aesthetic facial subunits, range of motion, aesthetics, and patient satisfaction were improved long term in all our patients while minimizing donor-site morbidity. Copyright © 2016 British Association of Plastic, Reconstructive and Aesthetic Surgeons. Published by Elsevier Ltd. All rights reserved.

Turbulent fluxes by "Conditional Eddy Sampling"

Science.gov (United States)

Siebicke, Lukas

2015-04-01

Turbulent flux measurements are key to understanding ecosystem scale energy and matter exchange, including atmospheric trace gases. While the eddy covariance approach has evolved as an invaluable tool to quantify fluxes of e.g. CO2 and H2O continuously, it is limited to very few atmospheric constituents for which sufficiently fast analyzers exist. High instrument cost, lack of field-readiness or high power consumption (e.g. many recent laser-based systems requiring strong vacuum) further impair application to other tracers. Alternative micrometeorological approaches such as conditional sampling might overcome major limitations. Although the idea of eddy accumulation has already been proposed by Desjardin in 1972 (Desjardin, 1977), at the time it could not be realized for trace gases. Major simplifications by Businger and Oncley (1990) lead to it's widespread application as 'Relaxed Eddy Accumulation' (REA). However, those simplifications (flux gradient similarity with constant flow rate sampling irrespective of vertical wind velocity and introduction of a deadband around zero vertical wind velocity) have degraded eddy accumulation to an indirect method, introducing issues of scalar similarity and often lack of suitable scalar flux proxies. Here we present a real implementation of a true eddy accumulation system according to the original concept. Key to our approach, which we call 'Conditional Eddy Sampling' (CES), is the mathematical formulation of conditional sampling in it's true form of a direct eddy flux measurement paired with a performant real implementation. Dedicated hardware controlled by near-real-time software allows full signal recovery at 10 or 20 Hz, very fast valve switching, instant vertical wind velocity proportional flow rate control, virtually no deadband and adaptive power management. Demonstrated system performance often exceeds requirements for flux measurements by orders of magnitude. The system's exceptionally low power consumption is ideal

Solar wind heat flux regulation by the whistler instability

International Nuclear Information System (INIS)

Gary, S.P.; Feldman, W.C.

1977-01-01

This paper studies the role of the whistler instability in the regulation of the solar wind heat flux near 1 AU. A comparison of linear and second-order theory with experimental results provides strong evidence that the whistler may at times contribute to the limitation of this heat flux

Profile reconstruction from neutron reflectivity data and a priori knowledge

International Nuclear Information System (INIS)

Leeb, H.

2008-01-01

The problem of incomplete and noisy information in profile reconstruction from neutron reflectometry data is considered. In particular methods of Bayesian statistics in combination with modelling or inverse scattering techniques are considered in order to properly include the required a priori knowledge to obtain quantitatively reliable estimates of the reconstructed profiles. Applying Bayes theorem the results of different experiments on the same sample can be consistently included in the profile reconstruction

Edge-promoting reconstruction of absorption and diffusivity in optical tomography

International Nuclear Information System (INIS)

Hannukainen, A; Hyvönen, N; Majander, H; Harhanen, L

2016-01-01

In optical tomography a physical body is illuminated with near-infrared light and the resulting outward photon flux is measured at the object boundary. The goal is to reconstruct internal optical properties of the body, such as absorption and diffusivity. In this work, it is assumed that the imaged object is composed of an approximately homogeneous background with clearly distinguishable embedded inhomogeneities. An algorithm for finding the maximum a posteriori estimate for the absorption and diffusion coefficients is introduced assuming an edge-preferring prior and an additive Gaussian measurement noise model. The method is based on iteratively combining a lagged diffusivity step and a linearization of the measurement model of diffuse optical tomography with priorconditioned LSQR. The performance of the reconstruction technique is tested via three-dimensional numerical experiments with simulated data. (paper)

Evaluating low pass filters on SPECT reconstructed cardiac orientation estimation

Science.gov (United States)

Dwivedi, Shekhar

2009-02-01

Low pass filters can affect the quality of clinical SPECT images by smoothing. Appropriate filter and parameter selection leads to optimum smoothing that leads to a better quantification followed by correct diagnosis and accurate interpretation by the physician. This study aims at evaluating the low pass filters on SPECT reconstruction algorithms. Criteria for evaluating the filters are estimating the SPECT reconstructed cardiac azimuth and elevation angle. Low pass filters studied are butterworth, gaussian, hamming, hanning and parzen. Experiments are conducted using three reconstruction algorithms, FBP (filtered back projection), MLEM (maximum likelihood expectation maximization) and OSEM (ordered subsets expectation maximization), on four gated cardiac patient projections (two patients with stress and rest projections). Each filter is applied with varying cutoff and order for each reconstruction algorithm (only butterworth used for MLEM and OSEM). The azimuth and elevation angles are calculated from the reconstructed volume and the variation observed in the angles with varying filter parameters is reported. Our results demonstrate that behavior of hamming, hanning and parzen filter (used with FBP) with varying cutoff is similar for all the datasets. Butterworth filter (cutoff > 0.4) behaves in a similar fashion for all the datasets using all the algorithms whereas with OSEM for a cutoff < 0.4, it fails to generate cardiac orientation due to oversmoothing, and gives an unstable response with FBP and MLEM. This study on evaluating effect of low pass filter cutoff and order on cardiac orientation using three different reconstruction algorithms provides an interesting insight into optimal selection of filter parameters.

Tomographic reconstruction of storm time RC ion distribution from ENA images on board multiple spacecraft

Science.gov (United States)

Ma, Shu-Ying; Yan, Wei-Nan; Xu, Liang

2015-11-01

A quantitative retrieval of 3-D distribution of energetic ions as energetic neutral atoms (ENA) sources is a challenging task. In this paper the voxel computerized tomography (CT) method is initially applied to reconstruct the 3-D distribution of energetic ions in the magnetospheric ring current (RC) region from ENA emission images on board multiple spacecraft. To weaken the influence of low-altitude emission (LAE) on the reconstruction, the LAE-associated ENA intensities are corrected by invoking the thick-target approximation. To overcome the divergence in iteration due to discordant instrument biases, a differential ENA voxel CT method is developed. The method is proved reliable and advantageous by numerical simulation for the case of constant bias independent of viewing angle. Then this method is implemented with ENA data measured by the Two Wide-angle Imaging Neutral-atom Spectrometers mission which performs stereoscopic ENA imaging. The 3-D spatial distributions and energy spectra of RC ion flux intensity are reconstructed for energies of 4-50 keV during the main phase of a major magnetic storm. The retrieved ion flux distributions seem to correspond to an asymmetric partial RC, located mainly around midnight favoring the postmidnight with L = 3.5-7.0 in the equatorial plane. The RC ion distributions with magnetic local time depend on energy, with major equatorial flux peak for lower energy located east of that for higher energy. In comparison with the ion energy spectra measured by Time History of Events and Macroscale Interactions during Substorms-D satellite flying in the RC region, the retrieved spectrum from remotely sensed ENA images are well matched with the in situ measurements.

Resolution effects in reconstructing ancestral genomes.

Science.gov (United States)

Zheng, Chunfang; Jeong, Yuji; Turcotte, Madisyn Gabrielle; Sankoff, David

2018-05-09

The reconstruction of ancestral genomes must deal with the problem of resolution, necessarily involving a trade-off between trying to identify genomic details and being overwhelmed by noise at higher resolutions. We use the median reconstruction at the synteny block level, of the ancestral genome of the order Gentianales, based on coffee, Rhazya stricta and grape, to exemplify the effects of resolution (granularity) on comparative genomic analyses. We show how decreased resolution blurs the differences between evolving genomes, with respect to rate, mutational process and other characteristics.

Reconstruction of pin burnup characteristics from nodal calculations in hexagonal geometry

International Nuclear Information System (INIS)

Yang, W.S.; Finck, P.J.; Khalil, H.S.

1990-01-01

A reconstruction method has been developed for recovering pin burnup characteristics from fuel cycle calculations performed in hexagonal-z geometry using the nodal diffusion option of the DIF3D/REBUS-3 code system. Intra-modal distributions of group fluxes, nuclide densities, power density, burnup, and fluence are efficiently computed using polynomial shapes constrained to satisfy nodal information. The accuracy of the method has been tested by performing several numerical benchmark calculations and by comparing predicted local burnups to values measured for experimental assemblies in EBR-11. The results indicate that the reconstruction methods are quite accurate, yielding maximum errors in power and nuclide densities that are less than 2% for driver assemblies and typically less than 5% for blanket assemblies. 14 refs., 2 figs., 5 tabs

Excitation of neutron flux waves in reactor core transients

International Nuclear Information System (INIS)

Carew, J.F.; Neogy, P.

1983-01-01

An analysis of the excitation of neutron flux waves in reactor core transients has been performed. A perturbation theory solution has been developed for the time-dependent thermal diffusion equation in which the absorption cross section undergoes a rapid change, as in a PWR rod ejection accident (REA). In this analysis the unperturbed reactor flux states provide the basis for the spatial representation of the flux solution. Using a simplified space-time representation for the cross section change, the temporal integrations have been carried out and analytic expressions for the modal flux amplitudes determined. The first order modal excitation strength is determined by the spatial overlap between the initial and final flux states, and the cross section perturbation. The flux wave amplitudes are found to be largest for rapid transients involving large reactivity perturbations

The inverse Numerical Computer Program FLUX-BOT for estimating Vertical Water Fluxes from Temperature Time-Series.

Science.gov (United States)

Trauth, N.; Schmidt, C.; Munz, M.

2016-12-01

Heat as a natural tracer to quantify water fluxes between groundwater and surface water has evolved to a standard hydrological method. Typically, time series of temperatures in the surface water and in the sediment are observed and are subsequently evaluated by a vertical 1D representation of heat transport by advection and dispersion. Several analytical solutions as well as their implementation into user-friendly software exist in order to estimate water fluxes from the observed temperatures. Analytical solutions can be easily implemented but assumptions on the boundary conditions have to be made a priori, e.g. sinusoidal upper temperature boundary. Numerical models offer more flexibility and can handle temperature data which is characterized by irregular variations such as storm-event induced temperature changes and thus cannot readily be incorporated in analytical solutions. This also reduced the effort of data preprocessing such as the extraction of the diurnal temperature variation. We developed a software to estimate water FLUXes Based On Temperatures- FLUX-BOT. FLUX-BOT is a numerical code written in MATLAB which is intended to calculate vertical water fluxes in saturated sediments, based on the inversion of measured temperature time series observed at multiple depths. It applies a cell-centered Crank-Nicolson implicit finite difference scheme to solve the one-dimensional heat advection-conduction equation. Besides its core inverse numerical routines, FLUX-BOT includes functions visualizing the results and functions for performing uncertainty analysis. We provide applications of FLUX-BOT to generic as well as to measured temperature data to demonstrate its performance.

Fast nanoscale heat-flux modulation with phase-change materials

OpenAIRE

Van Zwol , Pieter; Joulain , Karl; Ben-Abdallah , Philippe; Greffet , Jean-Jacques; Chevrier , Joël

2011-01-01

International audience; We introduce a new concept for electrically controlled heat flux modulation. A flux contrast larger than 10 dB is expected with switching time on the order of tens of nanoseconds. Heat flux modulation is based on the interplay between radiative heat transfer at the nanoscale and phase change materials. Such large contrasts are not obtainable in solids, or in far field. As such this opens up new horizons for temperature modulation and actuation at the nanoscale.

Genome rearrangements and phylogeny reconstruction in Yersinia pestis.

Science.gov (United States)

Bochkareva, Olga O; Dranenko, Natalia O; Ocheredko, Elena S; Kanevsky, German M; Lozinsky, Yaroslav N; Khalaycheva, Vera A; Artamonova, Irena I; Gelfand, Mikhail S

2018-01-01

Genome rearrangements have played an important role in the evolution of Yersinia pestis from its progenitor Yersinia pseudotuberculosis . Traditional phylogenetic trees for Y. pestis based on sequence comparison have short internal branches and low bootstrap supports as only a small number of nucleotide substitutions have occurred. On the other hand, even a small number of genome rearrangements may resolve topological ambiguities in a phylogenetic tree. We reconstructed phylogenetic trees based on genome rearrangements using several popular approaches such as Maximum likelihood for Gene Order and the Bayesian model of genome rearrangements by inversions. We also reconciled phylogenetic trees for each of the three CRISPR loci to obtain an integrated scenario of the CRISPR cassette evolution. Analysis of contradictions between the obtained evolutionary trees yielded numerous parallel inversions and gain/loss events. Our data indicate that an integrated analysis of sequence-based and inversion-based trees enhances the resolution of phylogenetic reconstruction. In contrast, reconstructions of strain relationships based on solely CRISPR loci may not be reliable, as the history is obscured by large deletions, obliterating the order of spacer gains. Similarly, numerous parallel gene losses preclude reconstruction of phylogeny based on gene content.

Plasma crowbars in cylindrical flux compression experiments

International Nuclear Information System (INIS)

Suter, L.J.

1979-01-01

We have done a series of one- and two-dimensional calculations of hard-core Z-pinch flux compression experiments in order to study the effect of a plasma on these systems. These calculations show that including a plasma can reduce the amount of flux lost during the compression. Flux losses to the outer wall of such experiments can be greatly reduced by a plasma conducting sheath which forms along the wall. This conducting sheath consists of a cold, dense high β, unmagnetized plasma which has enough pressure to balance a large field gradient. Flux which is lost into the center conductor is not effectively stopped by this plasma sheath until late in the implosion, at which time a layer similar to the one formed at the outer wall is created. Two-dimensionl simulations show that flux losses due to arching along the sliding contact of the experiment can be effectively stopped by the formation of a plasma conducting sheath

The transient transpiration heat flux meter

International Nuclear Information System (INIS)

Martins, N.; Calisto, H.; Afgan, N.; Leontiev, A.I.

2006-01-01

A new heat flux measurement principle, based on the transient response of a transpiration radiometer, is proposed. The measurement principle of current transpiration radiometers is based on a steady-state temperature measurement in a porous element. Since it may typically take several seconds to reach these conditions, there are obvious benefits in reducing the instrument response time. This can be achieved through the analysis of its transient response in order to predict the incident heat flux. In addition, the proposed methodology enables the separate measurement of the radiative and convective components of incident heat fluxes, without compromising the known advantages of transpiration radiometers. The availability of such an instrument may enable the development of advanced monitoring, diagnostic and control systems for thermal equipment

Reconstructing solar magnetic fields from historical observations: Testing the surface flux transport model

Science.gov (United States)

Virtanen, Iiro; Virtanen, Ilpo; Pevtsov, Alexei; Yeates, Anthony; Mursula, Kalevi

2017-04-01

We aim to use the surface flux transport model to simulate the long-term evolution of the photospheric magnetic field from historical observations. In this work we study the accuracy of the model and its sensitivity to uncertainties in its main parameters and the input data. We test the model by running simulations with different values of meridional circulation and supergranular diffusion parameters, and study how the flux distribution inside active regions and the initial magnetic field affect the simulation. We compare the results to assess how sensitive the simulation is to uncertainties in meridional circulation speed, supergranular diffusion and input data. We also compare the simulated magnetic field with observations. We find that there is generally good agreement between simulations and observations. While the model is not capable of replicating fine details of the magnetic field, the long-term evolution of the polar field is very similar in simulations and observations. Simulations typically yield a smoother evolution of polar fields than observations, that often include artificial variations due to observational limitations. We also find that the simulated field is fairly insensitive to uncertainties in model parameters or the input data. Due to the decay term included in the model the effects of the uncertainties are rather minor or temporary, lasting typically one solar cycle.

Axially symmetric reconstruction of plasma emission and absorption coefficients

International Nuclear Information System (INIS)

Yang Lixin; Jia Hui; Yang Jiankun; Li Xiujian; Chen Shaorong; Liu Xishun

2013-01-01

A layered structure imaging model is developed in order to reconstruct emission coefficients and absorption coefficients simultaneously, in laser fusion core plasma diagnostics. A novel axially symmetric reconstruction method that utilizes the LM (Levenberg-Marquardt) nonlinear least squares minimization algorithm is proposed based on the layered structure. Numerical simulation results demonstrate that the proposed method is sufficiently accurate to reconstruct emission coefficients and absorption coefficients, and when the standard deviation of noise is 0.01, the errors of emission coefficients and absorption coefficients are 0.17, 0.22, respectively. Furthermore, this method could perform much better on reconstruction effect compared with traditional inverse Abel transform algorithms. (authors)

3-D image reconstruction in radiology

International Nuclear Information System (INIS)

Grangeat, P.

1999-01-01

In this course, we present highlights on fully 3-D image reconstruction algorithms used in 3-D X-ray Computed Tomography (3-D-CT) and 3-D Rotational Radiography (3-D-RR). We first consider the case of spiral CT with a one-row detector. Starting from the 2-D fan-beam inversion formula for a circular trajectory, we introduce spiral CT 3-D image reconstruction algorithm using axial interpolation for each transverse slice. In order to improve the X-ray detection efficiency and to speed the acquisition process, the future is to use multi-row detectors associated with small angle cone-beam geometry. The generalization of the 2-D fan-beam image reconstruction algorithm to cone beam defined direct inversion formula referred as Feldkamp's algorithm for a circular trajectory and Wang's algorithm for a spiral trajectory. However, large area detectors does exist such as Radiological Image Intensifiers or in a near future solid state detectors. To get a larger zoom effect, it defines a cone-beam geometry associated with a large aperture angle. For this case, we introduce indirect image reconstruction algorithm by plane re-binning in the Radon domain. We will present some results from a prototype MORPHOMETER device using the RADON reconstruction software. Lastly, we consider the special case of 3-D Rotational Digital Subtraction Angiography with a restricted number of views. We introduce constraint optimization algorithm using quadratic, entropic or half-quadratic constraints. Generalized ART (Algebraic Reconstruction Technique) iterative reconstruction algorithm can be derived from the Bregman algorithm. We present reconstructed vascular trees from a prototype MORPHOMETER device. (author)

Clinical evaluation of iterative reconstruction (ordered-subset expectation maximization) in dynamic positron emission tomography: quantitative effects on kinetic modeling with N-13 ammonia in healthy subjects

DEFF Research Database (Denmark)

Hove, Jens D; Rasmussen, Rune; Freiberg, Jacob

2008-01-01

BACKGROUND: The purpose of this study was to investigate the quantitative properties of ordered-subset expectation maximization (OSEM) on kinetic modeling with nitrogen 13 ammonia compared with filtered backprojection (FBP) in healthy subjects. METHODS AND RESULTS: Cardiac N-13 ammonia positron...... emission tomography (PET) studies from 20 normal volunteers at rest and during dipyridamole stimulation were analyzed. Image data were reconstructed with either FBP or OSEM. FBP- and OSEM-derived input functions and tissue curves were compared together with the myocardial blood flow and spillover values...... and OSEM flow values were observed with a flow underestimation of 45% (rest/dipyridamole) in the septum and of 5% (rest) and 15% (dipyridamole) in the lateral myocardial wall. CONCLUSIONS: OSEM reconstruction of myocardial perfusion images with N-13 ammonia and PET produces high-quality images for visual...

Reconstruction of Clear-PEM data with STIR

CERN Document Server

Martins, M V; Rodrigues, P; Trindade, A; Oliveira, N; Correia, M; Cordeiro, H; Ferreira, N C; Varela, J; Almeida, P

2006-01-01

The Clear-PEM scanner is a device based on planar detectors that is currently under development within the Crystal Clear Collaboration, at CERN. The basis for 3D image reconstruction in Clear-PEM is the software for tomographic image reconstruction (STIR). STIR is an open source object-oriented library that efficiently deals with the 3D positron emission tomography data sets. This library was originally designed for the traditional cylindrical scanners. In order to make its use compatible with planar scanner data, new functionalities were introduced into the library's framework. In this work, Monte Carlo simulations of the Clear-PEM scanner acquisitions were used as input for image reconstruction with the 3D OSEM algorithm available in STIR. The results presented indicate that dual plate PEM data can be accurately reconstructed using the enhanced STIR framework.

Overview of the 2013 FireFlux II grass fire field experiment

Science.gov (United States)

C.B. Clements; B. Davis; D. Seto; J. Contezac; A. Kochanski; J.-B. Fillipi; N. Lareau; B. Barboni; B. Butler; S. Krueger; R. Ottmar; R. Vihnanek; W.E. Heilman; J. Flynn; M.A. Jenkins; J. Mandel; C. Teske; D. Jimenez; J. O' Brien; B. Lefer

2014-01-01

In order to better understand the dynamics of fire-atmosphere interactions and the role of micrometeorology on fire behaviour the FireFlux campaign was conducted in 2006 on a coastal tall-grass prairie in southeast Texas, USA. The FireFlux campaign dataset has become the international standard for evaluating coupled fire-atmosphere model systems. While FireFlux is one...

Reference equilibrium core with central flux irradiation facility for Pakistan research reactor-1

International Nuclear Information System (INIS)

Israr, M.; Shami, Qamar-ud-din; Pervez, S.

1997-11-01

In order to assess various core parameters a reference equilibrium core with Low Enriched Uranium (LEU) fuel for Pakistan Research Reactor (PARR-1) was assembled. Due to increased volume of reference core, the average neutron flux reduced as compared to the first higher power operation. To get a higher neutron flux an irradiation facility was created in centre of the reference equilibrium core where the advantage of the neutron flux peaking was taken. Various low power experiments were performed in order to evaluate control rods worth and neutron flux mapping inside the core. The neutron flux inside the central irradiation facility almost doubled. With this arrangement reactor operation time was cut down from 72 hours to 48 hours for the production of the required specific radioactivity. (author)

Energy reconstruction in the long-baseline neutrino experiment.

Science.gov (United States)

Mosel, U; Lalakulich, O; Gallmeister, K

2014-04-18

The Long-Baseline Neutrino Experiment aims at measuring fundamental physical parameters to high precision and exploring physics beyond the standard model. Nuclear targets introduce complications towards that aim. We investigate the uncertainties in the energy reconstruction, based on quasielastic scattering relations, due to nuclear effects. The reconstructed event distributions as a function of energy tend to be smeared out and shifted by several 100 MeV in their oscillatory structure if standard event selection is used. We show that a more restrictive experimental event selection offers the possibility to reach the accuracy needed for a determination of the mass ordering and the CP-violating phase. Quasielastic-based energy reconstruction could thus be a viable alternative to the calorimetric reconstruction also at higher energies.

Super-Resolution Image Reconstruction Applied to Medical Ultrasound

Science.gov (United States)

Ellis, Michael

Ultrasound is the preferred imaging modality for many diagnostic applications due to its real-time image reconstruction and low cost. Nonetheless, conventional ultrasound is not used in many applications because of limited spatial resolution and soft tissue contrast. Most commercial ultrasound systems reconstruct images using a simple delay-and-sum architecture on receive, which is fast and robust but does not utilize all information available in the raw data. Recently, more sophisticated image reconstruction methods have been developed that make use of far more information in the raw data to improve resolution and contrast. One such method is the Time-Domain Optimized Near-Field Estimator (TONE), which employs a maximum a priori estimation to solve a highly underdetermined problem, given a well-defined system model. TONE has been shown to significantly improve both the contrast and resolution of ultrasound images when compared to conventional methods. However, TONE's lack of robustness to variations from the system model and extremely high computational cost hinder it from being readily adopted in clinical scanners. This dissertation aims to reduce the impact of TONE's shortcomings, transforming it from an academic construct to a clinically viable image reconstruction algorithm. By altering the system model from a collection of individual hypothetical scatterers to a collection of weighted, diffuse regions, dTONE is able to achieve much greater robustness to modeling errors. A method for efficient parallelization of dTONE is presented that reduces reconstruction time by more than an order of magnitude with little loss in image fidelity. An alternative reconstruction algorithm, called qTONE, is also developed and is able to reduce reconstruction times by another two orders of magnitude while simultaneously improving image contrast. Each of these methods for improving TONE are presented, their limitations are explored, and all are used in concert to reconstruct in

Spectral reconstruction for a 6 MV linear accelerator

International Nuclear Information System (INIS)

Hernandez-Bojorquez, M.; Martinez-Davalos, A.; Larraga, J. M.

2004-01-01

In this work we present the first results of an x-ray spectral reconstruction for a 6 MV Varian LINAC. The shape of the spectrum will be used in Monte Carlo treatment planning in order to improve the quality and accuracy of the calculated dose distributions. We based our simulation method on the formalism proposed by Francois et al. In this method the spectrum is reconstructed from transmission measurements under narrow beam geometry for multiple attenuator thicknesses. These data allowed us to reconstruct the x-ray spectrum through direct solution of matrix systems using spectral algebra formalism

Diurnal Change of Soil Carbon Flux of Binhai New District

Science.gov (United States)

Wang, T. F.; Mao, T. Y.; Ye, W.

2018-05-01

In order to investigate the factors influencing diurnal change of soil carbon flux of Binhai New District. Field observation experiments were carried out by using LC pro-SD photosynthetic apparatus. The diurnal changes of soil carbon flux and its environmental factors such as atmosphere temperature and soil temperature were analysed. The results indicated that soil carbon flux appeared single diurnal pattern. The diurnal average of soil carbon flux ranked from 0.2761 to 2.3367μmo1/m2/s. Soil carbon flux varied significantly among different land use regimes(Pequations (Pquadratic correlations between soil carbon flux and soil temperature (10cm). And soil temperature could account for more than 32.27% of the soil carbon flux changes (P<0.05, R2=0.3227-0.7465).

Determination of lead 210 atmospheric fluxes in Syria

International Nuclear Information System (INIS)

Al-Masri, M. S.; Shaik Khalil, H.

2001-01-01

Lead 210 atmospheric fluxes were determined by collecting 51 profiles from Syrian soil during 1998. Lead 210 fluxes in Syria calculated from lead 210 inventory in soil ranged from 15 Bq.m -2 .y -1 and 407 Bq.m -2 .y -1 with an average value of 128 Bq.m -2 .y -1 . the highest fluxes were found to be in Hama area due to the Gaab fault, which is considered as a radon source in the area. In addition, fluxes were also high in most sites, which are located in Syria valleys and around the lakes. Moreover, the study has indicated that there is no linear relation between lead 210 flux values and other parameters such as annual rainfall and bulk density of the soil. On the other hand, an effect, of those two factors on lead 210 distribution with depth has been observed. In addition, the results of variable lead 210 fluxes from site to another have proved that it is necessary, in order to obtain a representative mean value of lead 210 flux obtained in this study is within the worldwide range for lead 210 flux. (Author)

3-D Reconstruction From Satellite Images

DEFF Research Database (Denmark)

Denver, Troelz

1999-01-01

of planetary surfaces, but other purposes is considered as well. The system performance is measured with respect to the precision and the time consumption.The reconstruction process is divided into four major areas: Acquisition, calibration, matching/reconstruction and presentation. Each of these areas...... are treated individually. A detailed treatment of various lens distortions is required, in order to correct for these problems. This subject is included in the acquisition part. In the calibration part, the perspective distortion is removed from the images. Most attention has been paid to the matching problem...

EXPLOITING MIRRORS IN 3D RECONSTRUCTION OF SMALL ARTEFACTS

Directory of Open Access Journals (Sweden)

G. Kontogianni

2018-05-01

Full Text Available 3D reconstruction of small artefacts is very significant in order to capture the details of the whole object irrespective of the documentation method which is used (Ranged Based or Image Based. Sometimes it is very difficult to achieve it because of hidden parts, occlusions, and obstructions which the object has. Hence, more data are necessary in order to 3D digitise the whole of the artefact leading to increased time for collecting and consequently processing the data. A methodology is necessary in order to reduce the collection of the data and therefore their processing time especially in cases of mass digitisation. So in this paper, the use of mirrors in particular high-quality mirrors in the data acquisition phase for the 3D reconstruction of small artefacts is investigated. Two case studies of 3D reconstruction are presented: the first one concerns Range-Based modelling especially a Time of Flight laser scanner is utilised and in the second one Image-Based modelling technique is implemented.

Actinide and Xenon reactivity effects in ATW high flux systems

International Nuclear Information System (INIS)

Woosley, M.; Olson, K.; Henderson, D.L.

1995-01-01

In this paper, initial system reactivity response to flux changes caused by the actinides and xenon are investigated separately for a high flux ATW system. The maximum change in reactivity after a flux change due to the effect of the changing quantities of actinides is generally at least two orders of magnitude smaller than either the positive or negative reactivity effect associated with xenon after a shutdown or start-up. In any transient flux event, the reactivity response of the system to xenon will generally occlude the response due to the actinides

Actinide and xenon reactivity effects in ATW high flux systems

International Nuclear Information System (INIS)

Woosley, M.; Olson, K.; Henderson, D. L.; Sailor, W. C.

1995-01-01

In this paper, initial system reactivity response to flux changes caused by the actinides and xenon are investigated separately for a high flux ATW system. The maximum change in reactivity after a flux change due to the effect of the changing quantities of actinides is generally at least two orders of magnitude smaller than either the positive or negative reactivity effect associated with xenon after a shutdown or start-up. In any transient flux event, the reactivity response of the system to xenon will generally occlude the response due to the actinides

Actinide and Xenon reactivity effects in ATW high flux systems

Energy Technology Data Exchange (ETDEWEB)

Woosley, M. [Univ. of Virginia, Charlottesville, VA (United States); Olson, K.; Henderson, D.L. [Univ. of Wisconsin, Madison, WI (United States)] [and others

1995-10-01

In this paper, initial system reactivity response to flux changes caused by the actinides and xenon are investigated separately for a high flux ATW system. The maximum change in reactivity after a flux change due to the effect of the changing quantities of actinides is generally at least two orders of magnitude smaller than either the positive or negative reactivity effect associated with xenon after a shutdown or start-up. In any transient flux event, the reactivity response of the system to xenon will generally occlude the response due to the actinides.

Inverse modeling of the terrestrial carbon flux in China with flux covariance among inverted regions

Science.gov (United States)

Wang, H.; Jiang, F.; Chen, J. M.; Ju, W.; Wang, H.

2011-12-01

Quantitative understanding of the role of ocean and terrestrial biosphere in the global carbon cycle, their response and feedback to climate change is required for the future projection of the global climate. China has the largest amount of anthropogenic CO2 emission, diverse terrestrial ecosystems and an unprecedented rate of urbanization. Thus information on spatial and temporal distributions of the terrestrial carbon flux in China is of great importance in understanding the global carbon cycle. We developed a nested inversion with focus in China. Based on Transcom 22 regions for the globe, we divide China and its neighboring countries into 17 regions, making 39 regions in total for the globe. A Bayesian synthesis inversion is made to estimate the terrestrial carbon flux based on GlobalView CO2 data. In the inversion, GEOS-Chem is used as the transport model to develop the transport matrix. A terrestrial ecosystem model named BEPS is used to produce the prior surface flux to constrain the inversion. However, the sparseness of available observation stations in Asia poses a challenge to the inversion for the 17 small regions. To obtain additional constraint on the inversion, a prior flux covariance matrix is constructed using the BEPS model through analyzing the correlation in the net carbon flux among regions under variable climate conditions. The use of the covariance among different regions in the inversion effectively extends the information content of CO2 observations to more regions. The carbon flux over the 39 land and ocean regions are inverted for the period from 2004 to 2009. In order to investigate the impact of introducing the covariance matrix with non-zero off-diagonal values to the inversion, the inverted terrestrial carbon flux over China is evaluated against ChinaFlux eddy-covariance observations after applying an upscaling methodology.

Atmospheric muons reconstruction with Antares; Reconstruction de muons atmospheriques avec ANTARES

Energy Technology Data Exchange (ETDEWEB)

Melissas, M

2007-09-15

The ANTARES collaboration is building a neutrino telescope in the Mediterranean Sea. This detector contains 900 photomultiplier tubes, dispatched on 12 lines, in order to detect Cerenkov light from muon induced by neutrino interactions in the the vicinity of the detector. Currently the first 5 lines have been deployed. A first task consists in studying the stability of the detector calibration, which is a necessary step to understand the detector response. Then we studied optical properties of water, for this we developed a reconstruction method dedicated to LED Beacon. The extracted parameters are compatible with earlier measurements. A quality criteria to reject badly reconstructed track has been developed based on the likelihood of the tracks fit versus point fit. This has been applied to real data and a preliminary analysis of atmospheric muons with a 5-lines detector is performed. (author)

Holographic bulk reconstruction with α' corrections

Science.gov (United States)

Roy, Shubho R.; Sarkar, Debajyoti

2017-10-01

We outline a holographic recipe to reconstruct α' corrections to anti-de Sitter (AdS) (quantum) gravity from an underlying CFT in the strictly planar limit (N →∞ ). Assuming that the boundary CFT can be solved in principle to all orders of the 't Hooft coupling λ , for scalar primary operators, the λ-1 expansion of the conformal dimensions can be mapped to higher curvature corrections of the dual bulk scalar field action. Furthermore, for the metric perturbations in the bulk, the AdS /CFT operator-field isomorphism forces these corrections to be of the Lovelock type. We demonstrate this by reconstructing the coefficient of the leading Lovelock correction, also known as the Gauss-Bonnet term in a bulk AdS gravity action using the expression of stress-tensor two-point function up to subleading order in λ-1.

A multiscale mortar multipoint flux mixed finite element method

KAUST Repository

Wheeler, Mary Fanett

2012-02-03

In this paper, we develop a multiscale mortar multipoint flux mixed finite element method for second order elliptic problems. The equations in the coarse elements (or subdomains) are discretized on a fine grid scale by a multipoint flux mixed finite element method that reduces to cell-centered finite differences on irregular grids. The subdomain grids do not have to match across the interfaces. Continuity of flux between coarse elements is imposed via a mortar finite element space on a coarse grid scale. With an appropriate choice of polynomial degree of the mortar space, we derive optimal order convergence on the fine scale for both the multiscale pressure and velocity, as well as the coarse scale mortar pressure. Some superconvergence results are also derived. The algebraic system is reduced via a non-overlapping domain decomposition to a coarse scale mortar interface problem that is solved using a multiscale flux basis. Numerical experiments are presented to confirm the theory and illustrate the efficiency and flexibility of the method. © EDP Sciences, SMAI, 2012.

Online track reconstruction at hadron colliders

International Nuclear Information System (INIS)

Amerio, Silvia; Bettini, Marco; Nicoletto, Marino; Crescioli, Francesco; Bucciantonio, Martina; DELL'ORSO, Mauro; Piendibene, Marco; VOLPI, Guido; Annovi, Alberto; Catastini, Pierluigi; Giannetti, Paola; Lucchesi, Donatella

2010-01-01

Real time event reconstruction plays a fundamental role in High Energy Physics experiments. Reducing the rate of data to be saved on tape from millions to hundreds per second is critical. In order to increase the purity of the collected samples, rate reduction has to be coupled with the capability to simultaneously perform a first selection of the most interesting events. A fast and efficient online track reconstruction is important to effectively trigger on leptons and/or displaced tracks from b-quark decays. This talk will be an overview of online tracking techniques in different HEP environments: we will show how H1 experiment at HERA faced the challenges of online track reconstruction implementing pattern matching and track linking algorithms on CAMs and FPGAs in the Fast Track Processor (FTT). The pattern recognition technique is also at the basis of the Silicon Vertex Trigger (SVT) at the CDF experiment at Tevatron: coupled to a very fast fitting phase, SVT allows to trigger on displaced tracks, thus greatly increasing the efficiency for the hadronic B decay modes. A recent upgrade of the SVT track fitter, the Giga-fitter, can perform more than 1 fit/ns and further improves the CDF online trigger capabilities at high luminosity. At SLHC, where luminosities will be 2 orders of magnitude greater than Tevatron, online tracking will be much more challenging: we will describe CMS future plans for a Level-1 track trigger and the Fast Tracker (FTK) processor at the ATLAS experiment, based on the Giga-fitter architecture and designed to provide high quality tracks reconstructed over the entire detector in time for a Level-2 trigger decision.luminosity. At SLHC, where luminosities will be 2 orders of magnitude greater than Tevatron, online tracking will be much more challenging: we will describe CMS future plans for a Level-1 track trigger and the Fast Tracker (FTK) processor at the Atlas experiment, based on the Giga-fitter architecture and designed to provide high

Gaussian mixture models and semantic gating improve reconstructions from human brain activity

Directory of Open Access Journals (Sweden)

Sanne eSchoenmakers

2015-01-01

Full Text Available Better acquisition protocols and analysis techniques are making it possible to use fMRI to obtain highly detailed visualizations of brain processes. In particular we focus on the reconstruction of natural images from BOLD responses in visual cortex. We expand our linear Gaussian framework for percept decoding with Gaussian mixture models to better represent the prior distribution of natural images. Reconstruction of such images then boils down to probabilistic inference in a hybrid Bayesian network. In our set-up, different mixture components correspond to different character categories. Our framework can automatically infer higher-order semantic categories from lower-level brain areas. Furthermore the framework can gate semantic information from higher-order brain areas to enforce the correct category during reconstruction. When categorical information is not available, we show that automatically learned clusters in the data give a similar improvement in reconstruction. The hybrid Bayesian network leads to highly accurate reconstructions in both supervised and unsupervised settings.

Model-Based Least Squares Reconstruction of Coded Source Neutron Radiographs: Integrating the ORNL HFIR CG1D Source Model

Energy Technology Data Exchange (ETDEWEB)

Santos-Villalobos, Hector J [ORNL; Gregor, Jens [University of Tennessee, Knoxville (UTK); Bingham, Philip R [ORNL

2014-01-01

At the present, neutron sources cannot be fabricated small and powerful enough in order to achieve high resolution radiography while maintaining an adequate flux. One solution is to employ computational imaging techniques such as a Magnified Coded Source Imaging (CSI) system. A coded-mask is placed between the neutron source and the object. The system resolution is increased by reducing the size of the mask holes and the flux is increased by increasing the size of the coded-mask and/or the number of holes. One limitation of such system is that the resolution of current state-of-the-art scintillator-based detectors caps around 50um. To overcome this challenge, the coded-mask and object are magnified by making the distance from the coded-mask to the object much smaller than the distance from object to detector. In previous work, we have shown via synthetic experiments that our least squares method outperforms other methods in image quality and reconstruction precision because of the modeling of the CSI system components. However, the validation experiments were limited to simplistic neutron sources. In this work, we aim to model the flux distribution of a real neutron source and incorporate such a model in our least squares computational system. We provide a full description of the methodology used to characterize the neutron source and validate the method with synthetic experiments.

Clinical applications of iterative reconstruction

International Nuclear Information System (INIS)

Eberl, S.

1998-01-01

Expectation maximisation (EM) reconstruction largely eliminates the hot and cold streaking artifacts characteristic of filtered-back projection (FBP) reconstruction around localised hot areas, such as the bladder. It also substantially reduces the problem of decreased inferior wall counts in MIBI myocardial perfusion studies due to ''streaking'' from high liver uptake. Non-uniform attenuation and scatter correction, resolution recovery, anatomical information, e.g. from MRI or CT tracer kinetic modelling, can all be built into the EM reconstruction imaging model. The properties of ordered subset EM (OSEM) have also been used to correct for known patient motion as part of the reconstruction process. These uses of EM are elaborated more fully in some of the other abstracts of this meeting. Currently we use OSEM routinely for: (i) studies where streaking is a problem, including all MIBI myocardial perfusion studies, to avoid hot liver inferior wall artifact, (ii) all whole body FDG PET, all lung V/Q SPECT (which have a short acquisition time) and all gated 201 TI myocardial perfusion studies due to improved noise characteristics of OSEM in these studies; (iii) studies with measured, non-uniform attenuation correction. With the accelerated OSEM algorithm, iterative reconstruction is practical for routine clinical applications and we have found OSEM to provide clearly superior reconstructions for the areas listed above and are investigating its application to other studies. In clinical use, we have not found OSEM to introduce artifacts which would not also occur with FBP, e.g. uncorrected patient motion will cause artifacts with both OSEM and FBP

Preparation and tomographic reconstruction of an arbitrary single-photon path qubit

International Nuclear Information System (INIS)

Baek, So-Young; Kim, Yoon-Ho

2011-01-01

We report methods for preparation and tomographic reconstruction of an arbitrary single-photon path qubit. The arbitrary single-photon path qubit is prepared losslessly by passing the heralded single-photon state from spontaneous parametric down-conversion through variable beam splitter. Quantum state tomography of the single-photon path qubit is implemented by introducing path-projection measurements based on the first-order single-photon quantum interference. Using the state preparation and path-projection measurements methods for the single-photon path qubit, we demonstrate preparation and complete tomographic reconstruction of the single-photon path qubit with arbitrary purity. -- Highlights: → We report methods for preparation and tomographic reconstruction of an arbitrary single-photon path qubit. → We implement path-projection measurements based on the first-order single-photon quantum interference. → We demonstrate preparation and complete tomographic reconstruction of the single-photon path qubit with arbitrary purity.

Liquidity Dynamics in the Xetra Order Book

Science.gov (United States)

Schmidinger, Christoph

2010-09-01

In this paper we show how to reconstruct the limit order book of the 30 stocks constituting the DAX30 index based on the trading protocol of the Xetra Trading System at the Frankfurt Stock Exchange. The algorithm used is innovative as it captures all trading phases, including auctions, and delivers a reconstruction of the orderbook either from a trader's view or a supervisory view including hidden volume as well. Based on the rebuilt order book, liquidity dynamics are examined. In contrats to findings for dealer markets, past market returns play a minor role in the determination of liquidity and liquidity commonality in Xetra, a pure limit order book market. Consequently, we provide evidence that liquidity provision by multiple sources in Xetra mitigates systemic liquidity risk introduced by the interrelation of return and liquidity.

Joint-2D-SL0 Algorithm for Joint Sparse Matrix Reconstruction

Directory of Open Access Journals (Sweden)

Dong Zhang

2017-01-01

Full Text Available Sparse matrix reconstruction has a wide application such as DOA estimation and STAP. However, its performance is usually restricted by the grid mismatch problem. In this paper, we revise the sparse matrix reconstruction model and propose the joint sparse matrix reconstruction model based on one-order Taylor expansion. And it can overcome the grid mismatch problem. Then, we put forward the Joint-2D-SL0 algorithm which can solve the joint sparse matrix reconstruction problem efficiently. Compared with the Kronecker compressive sensing method, our proposed method has a higher computational efficiency and acceptable reconstruction accuracy. Finally, simulation results validate the superiority of the proposed method.

Reconstruction of phylogenetic trees of prokaryotes using maximal common intervals.

Science.gov (United States)

Heydari, Mahdi; Marashi, Sayed-Amir; Tusserkani, Ruzbeh; Sadeghi, Mehdi

2014-10-01

One of the fundamental problems in bioinformatics is phylogenetic tree reconstruction, which can be used for classifying living organisms into different taxonomic clades. The classical approach to this problem is based on a marker such as 16S ribosomal RNA. Since evolutionary events like genomic rearrangements are not included in reconstructions of phylogenetic trees based on single genes, much effort has been made to find other characteristics for phylogenetic reconstruction in recent years. With the increasing availability of completely sequenced genomes, gene order can be considered as a new solution for this problem. In the present work, we applied maximal common intervals (MCIs) in two or more genomes to infer their distance and to reconstruct their evolutionary relationship. Additionally, measures based on uncommon segments (UCS's), i.e., those genomic segments which are not detected as part of any of the MCIs, are also used for phylogenetic tree reconstruction. We applied these two types of measures for reconstructing the phylogenetic tree of 63 prokaryotes with known COG (clusters of orthologous groups) families. Similarity between the MCI-based (resp. UCS-based) reconstructed phylogenetic trees and the phylogenetic tree obtained from NCBI taxonomy browser is as high as 93.1% (resp. 94.9%). We show that in the case of this diverse dataset of prokaryotes, tree reconstruction based on MCI and UCS outperforms most of the currently available methods based on gene orders, including breakpoint distance and DCJ. We additionally tested our new measures on a dataset of 13 closely-related bacteria from the genus Prochlorococcus. In this case, distances like rearrangement distance, breakpoint distance and DCJ proved to be useful, while our new measures are still appropriate for phylogenetic reconstruction. Copyright © 2014 Elsevier Ireland Ltd. All rights reserved.

High Order Tensor Formulation for Convolutional Sparse Coding

KAUST Repository

Bibi, Adel Aamer

2017-12-25

Convolutional sparse coding (CSC) has gained attention for its successful role as a reconstruction and a classification tool in the computer vision and machine learning community. Current CSC methods can only reconstruct singlefeature 2D images independently. However, learning multidimensional dictionaries and sparse codes for the reconstruction of multi-dimensional data is very important, as it examines correlations among all the data jointly. This provides more capacity for the learned dictionaries to better reconstruct data. In this paper, we propose a generic and novel formulation for the CSC problem that can handle an arbitrary order tensor of data. Backed with experimental results, our proposed formulation can not only tackle applications that are not possible with standard CSC solvers, including colored video reconstruction (5D- tensors), but it also performs favorably in reconstruction with much fewer parameters as compared to naive extensions of standard CSC to multiple features/channels.

Dual matrix ordered subsets reconstruction for accelerated 3D scatter compensation in single-photon emission tomography

International Nuclear Information System (INIS)

Kamphuis, C.; Beekman, F.J.; Van Rijk, P.P.; Viergever, M.A.

1998-01-01

Three-dimensional (3D) iterative maximum likelihood expectation maximization (ML-EM) algorithms for single-photon emission tomography (SPET) are capable of correcting image-degrading effects of non-uniform attenuation, distance-dependent camera response and patient shape-dependent scatter. However, the resulting improvements in quantitation, resolution and signal-to-noise ratio (SNR) are obtained at the cost of a huge computational burden. This paper presents a new acceleration method for ML-EM: dual matrix ordered subsets (DM-OS). DM-OS combines two acceleration methods: (a) different matrices for projection and back-projection and (b) ordered subsets of projections. DM-OS was compared with ML-EM on simulated data and on physical thorax phantom data, for both 180 and 360 orbits. Contrast, normalized standard deviation and mean squared error were calculated for the digital phantom experiment. DM-OS resulted in similar image quality to ML-EM, even for speed-up factors of 200 compared to ML-EM in the case of 120 projections. The thorax phantom data could be reconstructed 50 times faster (60 projections) using DM-OS with preservation of image quality. ML-EM and DM-OS with scatter compensation showed significant improvement of SNR compared to ML-EM without scatter compensation. Furthermore, inclusion of complex image formation models in the computer code is simplified in the case of DM-OS. It is thus shown that DM-OS is a fast and relatively simple algorithm for 3D iterative scatter compensation, with similar results to conventional ML-EM, for both 180 and 360 acquired data. (orig.)

Nodal approximations of varying order by energy group for solving the diffusion equation

International Nuclear Information System (INIS)

Broda, J.T.

1992-02-01

The neutron flux across the nuclear reactor core is of interest to reactor designers and others. The diffusion equation, an integro-differential equation in space and energy, is commonly used to determine the flux level. However, the solution of a simplified version of this equation when automated is very time consuming. Since the flux level changes with time, in general, this calculation must be made repeatedly. Therefore solution techniques that speed the calculation while maintaining accuracy are desirable. One factor that contributes to the solution time is the spatial flux shape approximation used. It is common practice to use the same order flux shape approximation in each energy group even though this method may not be the most efficient. The one-dimensional, two-energy group diffusion equation was solved, for the node average flux and core k-effective, using two sets of spatial shape approximations for each of three reactor types. A fourth-order approximation in both energy groups forms the first set of approximations used. The second set used combines a second-order approximation with a fourth-order approximation in energy group two. Comparison of the results from the two approximation sets show that the use of a different order spatial flux shape approximation results in considerable loss in accuracy for the pressurized water reactor modeled. However, the loss in accuracy is small for the heavy water and graphite reactors modeled. The use of different order approximations in each energy group produces mixed results. Further investigation into the accuracy and computing time is required before any quantitative advantage of the use of the second-order approximation in energy group one and the fourth-order approximation in energy group two can be determined

Analytical modal diffusion theory based on flux separability

International Nuclear Information System (INIS)

Segev, M.

1987-01-01

The theory provides for an iterative solution of the mathematical problem of generating the assembly-wise power distribution in a LWR through the solution of the 2-group, multidimensional, diffusion equation. The companion problems of assembly pre-homogenization and of pin power reconstruction are of no direct concern presently. The theoretical development stems from the assumption of flux separability in X, Y and Z. The assumption derives from the notion that separability holds in a great part of the interior of a LWR assembly. More important, well accurate power maps are generated with a code based on the theoretical develpment yielded by the basic assumption

Critical heat flux evaluation

International Nuclear Information System (INIS)

Banner, D.

1995-01-01

Critical heat flux (CHF) is of importance for nuclear safety and represents the major limiting factors for reactor cores. Critical heat flux is caused by a sharp reduction in the heat transfer coefficient located at the outer surface of fuel rods. Safety requires that this phenomenon also called the boiling crisis should be precluded under nominal or incidental conditions (Class I and II events). CHF evaluation in reactor cores is basically a two-step approach. Fuel assemblies are first tested in experimental loops in order to determine CHF limits under various flow conditions. Then, core thermal-hydraulic calculations are performed for safety evaluation. The paper will go into more details about the boiling crisis in order to pinpoint complexity and lack of fundamental understanding in many areas. Experimental test sections needed to collect data over wide thermal-hydraulic and geometric ranges are described CHF safety margin evaluation in reactors cores is discussed by presenting how uncertainties are mentioned. From basic considerations to current concerns, the following topics are discussed; knowledge of the boiling crisis, CHF predictors, and advances thermal-hydraulic codes. (authors). 15 refs., 4 figs

Reconstruction Algorithms in Undersampled AFM Imaging

DEFF Research Database (Denmark)

Arildsen, Thomas; Oxvig, Christian Schou; Pedersen, Patrick Steffen

2016-01-01

This paper provides a study of spatial undersampling in atomic force microscopy (AFM) imaging followed by different image reconstruction techniques based on sparse approximation as well as interpolation. The main reasons for using undersampling is that it reduces the path length and thereby...... the scanning time as well as the amount of interaction between the AFM probe and the specimen. It can easily be applied on conventional AFM hardware. Due to undersampling, it is then necessary to further process the acquired image in order to reconstruct an approximation of the image. Based on real AFM cell...... images, our simulations reveal that using a simple raster scanning pattern in combination with conventional image interpolation performs very well. Moreover, this combination enables a reduction by a factor 10 of the scanning time while retaining an average reconstruction quality around 36 dB PSNR...

Development of a three-dimensional high-order strand-grids approach

Science.gov (United States)

Tong, Oisin

Development of a novel high-order flux correction method on strand grids is presented. The method uses a combination of flux correction in the unstructured plane and summation-by-parts operators in the strand direction to achieve high-fidelity solutions. Low-order truncation errors are cancelled with accurate flux and solution gradients in the flux correction method, thereby achieving a formal order of accuracy of 3, although higher orders are often obtained, especially for highly viscous flows. In this work, the scheme is extended to high-Reynolds number computations in both two and three dimensions. Turbulence closure is achieved with a robust version of the Spalart-Allmaras turbulence model that accommodates negative values of the turbulence working variable, and the Menter SST turbulence model, which blends the k-epsilon and k-o turbulence models for better accuracy. A major advantage of this high-order formulation is the ability to implement traditional finite volume-like limiters to cleanly capture shocked and discontinuous flows. In this work, this approach is explored via a symmetric limited positive (SLIP) limiter. Extensive verification and validation is conducted in two and three dimensions to determine the accuracy and fidelity of the scheme for a number of different cases. Verification studies show that the scheme achieves better than third order accuracy for low and high-Reynolds number flows. Cost studies show that in three-dimensions, the third-order flux correction scheme requires only 30% more walltime than a traditional second-order scheme on strand grids to achieve the same level of convergence. In order to overcome meshing issues at sharp corners and other small-scale features, a unique approach to traditional geometry, coined "asymptotic geometry," is explored. Asymptotic geometry is achieved by filtering out small-scale features in a level set domain through min/max flow. This approach is combined with a curvature based strand shortening

Energy flux to the TEXTOR limiters during disruptions

International Nuclear Information System (INIS)

Finken, K.H.; Baek, W.Y.; Dippel, K.H.; Boedo, J.A.; Gray, D.S.

1992-01-01

Rapidly changing heat fluxes deposited on the limiter blades are observed during disruptions by infrared (IR) scanners. These scanners are a suitable tool for the analysis of these heat fluxes because they provide both spatial and temporal information with sufficient resolution. Several new features of the power flux to the plasma facing surfaces during a disruption have been found. The disruptive heat flux occurs on three different time-scales. The fastest ones are for heat bursts with a duration of ≤0.1 ms; several of these bursts form a thermal quench of about one millisecond duration, and some of these thermal quenches are found to occur during the current decay phase. Power flux densities of the order of 50 MW/m 2 have been observed during a burst. The spatial extent of the area on which this power is deposited during a burst is larger than or equal to the size of half an ALT-II blade, i.e. about 1 m in the toroidal direction. Simultaneous measurements with two cameras show that the correlation length of a single burst is smaller than half the toroidal circumference, probably of the order of half a blade or a full blade length. This is consistent with plasma islands of low mode number. The typical heat deposition patterns at the limiter blades for normal discharges are preserved during a disruption. The magnetic structure near the plasma surface can therefore not be destroyed completely during the thermal quench. The power flux follows the field lines. However, the power e-folding length is about a factor of two to three times larger than under normal discharge conditions. (author). 27 refs, 9 figs

Impact of Reconstruction Algorithms on CT Radiomic Features of Pulmonary Tumors: Analysis of Intra- and Inter-Reader Variability and Inter-Reconstruction Algorithm Variability.

Science.gov (United States)

Kim, Hyungjin; Park, Chang Min; Lee, Myunghee; Park, Sang Joon; Song, Yong Sub; Lee, Jong Hyuk; Hwang, Eui Jin; Goo, Jin Mo

2016-01-01

To identify the impact of reconstruction algorithms on CT radiomic features of pulmonary tumors and to reveal and compare the intra- and inter-reader and inter-reconstruction algorithm variability of each feature. Forty-two patients (M:F = 19:23; mean age, 60.43±10.56 years) with 42 pulmonary tumors (22.56±8.51mm) underwent contrast-enhanced CT scans, which were reconstructed with filtered back projection and commercial iterative reconstruction algorithm (level 3 and 5). Two readers independently segmented the whole tumor volume. Fifteen radiomic features were extracted and compared among reconstruction algorithms. Intra- and inter-reader variability and inter-reconstruction algorithm variability were calculated using coefficients of variation (CVs) and then compared. Among the 15 features, 5 first-order tumor intensity features and 4 gray level co-occurrence matrix (GLCM)-based features showed significant differences (palgorithms. As for the variability, effective diameter, sphericity, entropy, and GLCM entropy were the most robust features (CV≤5%). Inter-reader variability was larger than intra-reader or inter-reconstruction algorithm variability in 9 features. However, for entropy, homogeneity, and 4 GLCM-based features, inter-reconstruction algorithm variability was significantly greater than inter-reader variability (palgorithms. Inter-reconstruction algorithm variability was greater than inter-reader variability for entropy, homogeneity, and GLCM-based features.

Deep Learning Techniques for Top-Quark Reconstruction

CERN Document Server

Naderi, Kiarash

2017-01-01

Top quarks are unique probes of the standard model (SM) predictions and have the potential to be a window for physics beyond the SM (BSM). Top quarks decay to a $Wb$ pair, and the $W$ can decay in leptons or jets. In a top pair event, assigning jets to their correct source is a challenge. In this study, I studied different methods for improving top reconstruction. The main motivation was to use Deep Learning Techniques in order to enhance the precision of top reconstruction.

Second-order accurate volume-of-fluid algorithms for tracking material interfaces

International Nuclear Information System (INIS)

Pilliod, James Edward; Puckett, Elbridge Gerry

2004-01-01

We introduce two new volume-of-fluid interface reconstruction algorithms and compare the accuracy of these algorithms to four other widely used volume-of-fluid interface reconstruction algorithms. We find that when the interface is smooth (e.g., continuous with two continuous derivatives) the new methods are second-order accurate and the other algorithms are first-order accurate. We propose a design criteria for a volume-of-fluid interface reconstruction algorithm to be second-order accurate. Namely, that it reproduce lines in two space dimensions or planes in three space dimensions exactly. We also introduce a second-order, unsplit, volume-of-fluid advection algorithm that is based on a second-order, finite difference method for scalar conservation laws due to Bell, Dawson and Shubin. We test this advection algorithm by modeling several different interface shapes propagating in two simple incompressible flows and compare the results with the standard second-order, operator-split advection algorithm. Although both methods are second-order accurate when the interface is smooth, we find that the unsplit algorithm exhibits noticeably better resolution in regions where the interface has discontinuous derivatives, such as at corners

The Importance of Non-Linearity on Turbulent Fluxes

DEFF Research Database (Denmark)

Rokni, Masoud

2007-01-01

Two new non-linear models for the turbulent heat fluxes are derived and developed from the transport equation of the scalar passive flux. These models are called as non-linear eddy diffusivity and non-linear scalar flux. The structure of these models is compared with the exact solution which...... is derived from the Cayley-Hamilton theorem and contains a three term-basis plus a non-linear term due to scalar fluxes. In order to study the performance of the model itself, all other turbulent quantities are taken from a DNS channel flow data-base and thus the error source has been minimized. The results...... are compared with the DNS channel flow and good agreement is achieved. It has been shown that the non-linearity parts of the models are important to capture the true path of the streamwise scalar fluxes. It has also been shown that one of model constant should have negative sign rather than positive, which had...

Two-dimensional Tissue Image Reconstruction Based on Magnetic Field Data

Directory of Open Access Journals (Sweden)

J. Dedkova

2012-09-01

Full Text Available This paper introduces new possibilities within two-dimensional reconstruction of internal conductivity distribution. In addition to the electric field inside the given object, the injected current causes a magnetic field which can be measured either outside the object by means of a Hall probe or inside the object through magnetic resonance imaging. The Magnetic Resonance method, together with Electrical impedance tomography (MREIT, is well known as a bio-imaging modality providing cross-sectional conductivity images with a good spatial resolution from the measurements of internal magnetic flux density produced by externally injected currents. A new algorithm for the conductivity reconstruction, which utilizes the internal current information with respect to corresponding boundary conditions and the external magnetic field, was developed. A series of computer simulations has been conducted to assess the performance of the proposed algorithm within the process of estimating electrical conductivity changes in the lungs, heart, and brain tissues captured in two-dimensional piecewise homogeneous chest and head models. The reconstructed conductivity distribution using the proposed method is compared with that using a conventional method based on Electrical Impedance Tomography (EIT. The acquired experience is discussed and the direction of further research is proposed.

MAGNETIC FLUX EXPULSION IN STAR FORMATION

International Nuclear Information System (INIS)

Zhao Bo; Li Zhiyun; Nakamura, Fumitaka; Krasnopolsky, Ruben; Shang, Hsien

2011-01-01

Stars form in dense cores of magnetized molecular clouds. If the magnetic flux threading the cores is dragged into the stars, the stellar field would be orders of magnitude stronger than observed. This well-known 'magnetic flux problem' demands that most of the core magnetic flux be decoupled from the matter that enters the star. We carry out the first exploration of what happens to the decoupled magnetic flux in three dimensions, using a magnetohydrodynamic (MHD) version of the ENZO adaptive mesh refinement code. The field-matter decoupling is achieved through a sink particle treatment, which is needed to follow the protostellar accretion phase of star formation. We find that the accumulation of the decoupled flux near the accreting protostar leads to a magnetic pressure buildup. The high pressure is released anisotropically along the path of least resistance. It drives a low-density expanding region in which the decoupled magnetic flux is expelled. This decoupling-enabled magnetic structure has never been seen before in three-dimensional MHD simulations of star formation. It generates a strong asymmetry in the protostellar accretion flow, potentially giving a kick to the star. In the presence of an initial core rotation, the structure presents an obstacle to the formation of a rotationally supported disk, in addition to magnetic braking, by acting as a rigid magnetic wall that prevents the rotating gas from completing a full orbit around the central object. We conclude that the decoupled magnetic flux from the stellar matter can strongly affect the protostellar collapse dynamics.

Designing on ICT reconstruction software based on DSP techniques

International Nuclear Information System (INIS)

Liu Jinhui; Xiang Xincheng

2006-01-01

The convolution back project (CBP) algorithm is used to realize the CT image's reconstruction in ICT generally, which is finished by using PC or workstation. In order to add the ability of multi-platform operation of CT reconstruction software, a CT reconstruction method based on modern digital signal processor (DSP) technique is proposed and realized in this paper. The hardware system based on TI's C6701 DSP processor is selected to support the CT software construction. The CT reconstruction software is compiled only using assembly language related to the DSP hardware. The CT software can be run on TI's C6701 EVM board by inputting the CT data, and can get the CT Images that satisfy the real demands. (authors)

Simultaneous maximum a posteriori longitudinal PET image reconstruction

Science.gov (United States)

Ellis, Sam; Reader, Andrew J.

2017-09-01

Positron emission tomography (PET) is frequently used to monitor functional changes that occur over extended time scales, for example in longitudinal oncology PET protocols that include routine clinical follow-up scans to assess the efficacy of a course of treatment. In these contexts PET datasets are currently reconstructed into images using single-dataset reconstruction methods. Inspired by recently proposed joint PET-MR reconstruction methods, we propose to reconstruct longitudinal datasets simultaneously by using a joint penalty term in order to exploit the high degree of similarity between longitudinal images. We achieved this by penalising voxel-wise differences between pairs of longitudinal PET images in a one-step-late maximum a posteriori (MAP) fashion, resulting in the MAP simultaneous longitudinal reconstruction (SLR) method. The proposed method reduced reconstruction errors and visually improved images relative to standard maximum likelihood expectation-maximisation (ML-EM) in simulated 2D longitudinal brain tumour scans. In reconstructions of split real 3D data with inserted simulated tumours, noise across images reconstructed with MAP-SLR was reduced to levels equivalent to doubling the number of detected counts when using ML-EM. Furthermore, quantification of tumour activities was largely preserved over a variety of longitudinal tumour changes, including changes in size and activity, with larger changes inducing larger biases relative to standard ML-EM reconstructions. Similar improvements were observed for a range of counts levels, demonstrating the robustness of the method when used with a single penalty strength. The results suggest that longitudinal regularisation is a simple but effective method of improving reconstructed PET images without using resolution degrading priors.

Neutron Flux Variation in the Nigeria Research Reactor-1 (NIRR-1)

International Nuclear Information System (INIS)

Yahaya, M.; Ahmed, Y.A.

2013-01-01

In order to ascertain the level of flux variation in one of the inner irradiation channels of the Nigeria Research Reactor-1 (NIRR-1), the irradiation container used for routine activation analysis was employed with copper wires as flux monitors. Measurements were carried out with copper wires arranged in axial direction to determine the thermal neutron flux at selected positions using absolute foil activation method. Our results show that there exists a slight flux variation from one position to another ranging from (4.57±0.21) x 10 11 to (5.20± 0.20) x 10 11 cm -2 s -1 .Individual foil shows slight flux variation from one position to another in the same irradiation container but they all pointed toward a level of consistency in variation in spite of the recent installation of the cadmium lined irradiation channel. The values obtained in this work are in good agreement with the previously measured value of (5.14±0.24) x 10 11 cm -2 s -1 after commissioning of NIRR-1 (Jonah et al., 2005). This shows that the cadmium lined installation does not affect the flux stability. In order to improve the accuracy of NAA using NIRR-l facility, there is need for flux corrections to be made by MNSR users during NAA particularly for samples in the axial position for long irradiation.

An investigation of temporal regularization techniques for dynamic PET reconstructions using temporal splines

International Nuclear Information System (INIS)

Verhaeghe, Jeroen; D'Asseler, Yves; Vandenberghe, Stefaan; Staelens, Steven; Lemahieu, Ignace

2007-01-01

The use of a temporal B-spline basis for the reconstruction of dynamic positron emission tomography data was investigated. Maximum likelihood (ML) reconstructions using an expectation maximization framework and maximum A-posteriori (MAP) reconstructions using the generalized expectation maximization framework were evaluated. Different parameters of the B-spline basis of such as order, number of basis functions and knot placing were investigated in a reconstruction task using simulated dynamic list-mode data. We found that a higher order basis reduced both the bias and variance. Using a higher number of basis functions in the modeling of the time activity curves (TACs) allowed the algorithm to model faster changes of the TACs, however, the TACs became noisier. We have compared ML, Gaussian postsmoothed ML and MAP reconstructions. The noise level in the ML reconstructions was controlled by varying the number of basis functions. The MAP algorithm penalized the integrated squared curvature of the reconstructed TAC. The postsmoothed ML was always outperformed in terms of bias and variance properties by the MAP and ML reconstructions. A simple adaptive knot placing strategy was also developed and evaluated. It is based on an arc length redistribution scheme during the reconstruction. The free knot reconstruction allowed a more accurate reconstruction while reducing the noise level especially for fast changing TACs such as blood input functions. Limiting the number of temporal basis functions combined with the adaptive knot placing strategy is in this case advantageous for regularization purposes when compared to the other regularization techniques

Correlation of conventional simulation x-ray films and CT images for HDR-brachytherapy catheters reconstruction

International Nuclear Information System (INIS)

Rajendran, M.; Reddy, K.D.; Reddy, R.M.; Reddy, J.M.; Reddy, B.V.N.; Kiran Kumar; Gopi, S.; Dharaniraj; Janardhanan

2002-01-01

In order to plan a brachytherapy implant, it is imperative that implant reconstruction is done accurately. The purpose of this paper is to evaluate whether implant reconstruction done with transverse CT images is comparable to reconstruction done with conventional x-ray films

Simple models with ALICE fluxes

CERN Document Server

Striet, J

2000-01-01

We introduce two simple models which feature an Alice electrodynamics phase. In a well defined sense the Alice flux solutions we obtain in these models obey first order equations similar to those of the Nielsen-Olesen fluxtube in the abelian higgs model in the Bogomol'nyi limit. Some numerical solutions are presented as well.

Method and Apparatus of Implementing a Magnetic Shield Flux Sweeper

Science.gov (United States)

Sadleir, John E. (Inventor)

2018-01-01

The present invention relates to a method and apparatus of protecting magnetically sensitive devices with a shield, including: a non-superconducting metal or lower transition temperature (T.sub.c) material compared to a higher transition temperature material, disposed in a magnetic field; means for creating a spatially varying order parameter's |.PSI.(r,T)|.sup.2 in a non-superconducting metal or a lower transition temperature material; wherein a spatially varying order parameter is created by a proximity effect, such that the non-superconducting metal or the lower transition temperature material becomes superconductive as a temperature is lowered, creating a flux-free Meissner state at a center thereof, in order to sweep magnetic flux lines to the periphery.

Track reconstruction for the P2 experiment

Energy Technology Data Exchange (ETDEWEB)

Tyukin, Alexey [JGU, Mainz (Germany); Collaboration: P2-Collaboration

2016-07-01

The P2 experiment at the future MESA accelerator in Mainz will measure elastically scattered electrons from a hydrogen or lead target in order to determine the parity violating asymmetry for different beam polarisations, which is created due to the weak charge of the target. The asymmetry can provide access to the Weinberg angle and the neutron skin of heavy nuclei. These quantities depend heavily on the momentum transfer Q{sup 2}, thus a reconstruction of single electron tracks in an inhomogeneous magnetic field is necessary. For this, the P2 detector will have four tracking planes of thin high voltage monolithic active pixel sensors (HV-MAPS). The scattered electrons propagate through a magnetic field and hit all four planes. In order to fit the hit positions the General Broken Lines method is used. As a fast propagator, a variation of the Runge-Kutta algorithm is applied, which solves the equation of motion in an inhomogeneous magnetic field numerically, such that the final state momentum and scattering angle can be reconstructed. The initial momentum and incident angle can vary strongly due to the thickness of the target, limiting the reconstruction quality. The average single track Q{sup 2} value of 0.006 GeV{sup 2}/c{sup 2} can be reconstructed with about 4 % uncertainty in a first analysis of the Geant4 simulation, leading to a high total precision due to large electron numbers in the experiment.

A tensor-based dictionary learning approach to tomographic image reconstruction

DEFF Research Database (Denmark)

Soltani, Sara; Kilmer, Misha E.; Hansen, Per Christian

2016-01-01

We consider tomographic reconstruction using priors in the form of a dictionary learned from training images. The reconstruction has two stages: first we construct a tensor dictionary prior from our training data, and then we pose the reconstruction problem in terms of recovering the expansion...... coefficients in that dictionary. Our approach differs from past approaches in that (a) we use a third-order tensor representation for our images and (b) we recast the reconstruction problem using the tensor formulation. The dictionary learning problem is presented as a non-negative tensor factorization problem...... with sparsity constraints. The reconstruction problem is formulated in a convex optimization framework by looking for a solution with a sparse representation in the tensor dictionary. Numerical results show that our tensor formulation leads to very sparse representations of both the training images...

Similarity-regulation of OS-EM for accelerated SPECT reconstruction

Science.gov (United States)

Vaissier, P. E. B.; Beekman, F. J.; Goorden, M. C.

2016-06-01

Ordered subsets expectation maximization (OS-EM) is widely used to accelerate image reconstruction in single photon emission computed tomography (SPECT). Speedup of OS-EM over maximum likelihood expectation maximization (ML-EM) is close to the number of subsets used. Although a high number of subsets can shorten reconstruction times significantly, it can also cause severe image artifacts such as improper erasure of reconstructed activity if projections contain few counts. We recently showed that such artifacts can be prevented by using a count-regulated OS-EM (CR-OS-EM) algorithm which automatically adapts the number of subsets for each voxel based on the estimated number of counts that the voxel contributed to the projections. While CR-OS-EM reached high speed-up over ML-EM in high-activity regions of images, speed in low-activity regions could still be very slow. In this work we propose similarity-regulated OS-EM (SR-OS-EM) as a much faster alternative to CR-OS-EM. SR-OS-EM also automatically and locally adapts the number of subsets, but it uses a different criterion for subset regulation: the number of subsets that is used for updating an individual voxel depends on how similar the reconstruction algorithm would update the estimated activity in that voxel with different subsets. Reconstructions of an image quality phantom and in vivo scans show that SR-OS-EM retains all of the favorable properties of CR-OS-EM, while reconstruction speed can be up to an order of magnitude higher in low-activity regions. Moreover our results suggest that SR-OS-EM can be operated with identical reconstruction parameters (including the number of iterations) for a wide range of count levels, which can be an additional advantage from a user perspective since users would only have to post-filter an image to present it at an appropriate noise level.

Analysis of neutron flux measurement systems using statistical functions

International Nuclear Information System (INIS)

Pontes, Eduardo Winston

1997-01-01

This work develops an integrated analysis for neutron flux measurement systems using the concepts of cumulants and spectra. Its major contribution is the generalization of Campbell's theorem in the form of spectra in the frequency domain, and its application to the analysis of neutron flux measurement systems. Campbell's theorem, in its generalized form, constitutes an important tool, not only to find the nth-order frequency spectra of the radiation detector, but also in the system analysis. The radiation detector, an ionization chamber for neutrons, is modeled for cylindrical, plane and spherical geometries. The detector current pulses are characterized by a vector of random parameters, and the associated charges, statistical moments and frequency spectra of the resulting current are calculated. A computer program is developed for application of the proposed methodology. In order for the analysis to integrate the associated electronics, the signal processor is studied, considering analog and digital configurations. The analysis is unified by developing the concept of equivalent systems that can be used to describe the cumulants and spectra in analog or digital systems. The noise in the signal processor input stage is analysed in terms of second order spectrum. Mathematical expressions are presented for cumulants and spectra up to fourth order, for important cases of filter positioning relative to detector spectra. Unbiased conventional estimators for cumulants are used, and, to evaluate systems precision and response time, expressions are developed for their variances. Finally, some possibilities for obtaining neutron radiation flux as a function of cumulants are discussed. In summary, this work proposes some analysis tools which make possible important decisions in the design of better neutron flux measurement systems. (author)

Measurement of mass flux in two-phase flow using combinations of Pitot tubes and gamma densitometers

International Nuclear Information System (INIS)

Hau, K.F.F.L.; Banerjee, S.

1981-01-01

New experimental data indicate that mass flux in cocurrent gas-liquid flows may be determined by the use of Pitot tubes in conjunction with a local mixture density measurement technique. The data were taken over a wide range of flow regimes in a horizontal pipe and included separated patterns such as stratified and annular flows. Local mixture densities were obtained by a computer-assisted algebraic reconstruction technique that used chordal average densities measured by traversing gamma beam attenuation. The results extend the applicability of this mass flux measurement technique well beyond the relatively homogeneous, high-pressure, steam-water flow situations originally studied by S. Banerjee and D.M. Nguyen. 13 refs

Oxyanion flux characterization using passive flux meters: Development and field testing of surfactant-modified granular activated carbon

Science.gov (United States)

Lee, Jimi; Rao, P. S. C.; Poyer, Irene C.; Toole, Robyn M.; Annable, M. D.; Hatfield, K.

2007-07-01

We report here on the extension of Passive Flux Meter (PFM) applications for measuring fluxes of oxyanions in groundwater, and present results for laboratory and field studies. Granular activated carbon, with and without impregnated silver (GAC and SI-GAC, respectively), was modified with a cationic surfactant, hexadecyltrimethylammonium (HDTMA), to enhance the anion exchange capacity (AEC). Langmuir isotherm sorption maxima for oxyanions measured in batch experiments were in the following order: perchlorate >> chromate > selenate, consistent with their selectivity. Linear sorption isotherms for several alcohols suggest that surfactant modification of GAC and SI-GAC reduced (˜ 30-45%) sorption of alcohols by GAC. Water and oxyanion fluxes (perchlorate and chromate) measured by deploying PFMs packed with surfactant-modified GAC (SM-GAC) or surfactant-modified, silver-impregnated GAC (SM-SI-GAC) in laboratory flow chambers were in close agreement with the imposed fluxes. The use of SM-SI-GAC as a PFM sorbent was evaluated at a field site with perchlorate contamination of a shallow unconfined aquifer. PFMs packed with SM-SI-GAC were deployed in three existing monitoring wells with a perchlorate concentration range of ˜ 2.5 to 190 mg/L. PFM-measured, depth-averaged, groundwater fluxes ranged from 1.8 to 7.6 cm/day, while depth-averaged perchlorate fluxes varied from 0.22 to 1.7 g/m 2/day. Groundwater and perchlorate flux distributions measured in two PFM deployments closely matched each other. Depth-averaged Darcy fluxes measured with PFMs were in line with an estimate from a borehole dilution test, but much smaller than those based on hydraulic conductivity and head gradients; this is likely due to flow divergence caused by well-screen clogging. Flux-averaged perchlorate concentrations measured with PFM deployments matched concentrations in groundwater samples taken from one well, but not in two other wells, pointing to the need for additional field testing. Use of

Effect of spatio-temporal noise in the Eddington factor on the scalar flux

International Nuclear Information System (INIS)

Prinja, Anil K.

2015-01-01

Highlights: • Spatio-temporal Gaussian noise is considered in the Eddington factor simulating noise in the low-order equation associated with a hybrid numerical solution technique for the transport equation. • A closed equation for the mean scalar flux is obtained that is accurate for small correlation times and exact in the white noise limit. • The equation for the mean scalar flux contains a fourth-order spatial derivative that is a consequence of the noise. • The fourth-order term is shown to destabilize all perturbations with wavelengths less than a critical value that depends on the noise amplitude, correlation length and time. • An asymptotic solution is shown to be possible for small noise amplitude. - Abstract: Spatial and temporal noise in the Eddington factor, simulating noise arising in hybrid numerical schemes, is modeled as a Gaussian stochastic process and its effect on the scalar flux investigated theoretically. In the small correlation time limit, a nonstandard closed equation for the mean scalar flux is obtained that contains a fourth order derivative of the scalar flux. In an infinite medium setting, this term is shown to have a destabilizing effect on the solution. Specifically, any spatial Fourier mode with wavelength smaller than a critical value, which depends on the noise characteristics, amplifies in time without bound, in contrast to the corresponding nonrandom case which is dissipative for all modes. An asymptotic solution is obtained which shows that the noise effect disappears at late times and the scalar flux limits to the deterministic solution.

Maximum entropy method in momentum density reconstruction

International Nuclear Information System (INIS)

Dobrzynski, L.; Holas, A.

1997-01-01

The Maximum Entropy Method (MEM) is applied to the reconstruction of the 3-dimensional electron momentum density distributions observed through the set of Compton profiles measured along various crystallographic directions. It is shown that the reconstruction of electron momentum density may be reliably carried out with the aid of simple iterative algorithm suggested originally by Collins. A number of distributions has been simulated in order to check the performance of MEM. It is shown that MEM can be recommended as a model-free approach. (author). 13 refs, 1 fig

GPU-accelerated few-view CT reconstruction using the OSC and TV techniques

Energy Technology Data Exchange (ETDEWEB)

Matenine, Dmitri [Montreal Univ., QC (Canada). Dept. de Physique; Hissoiny, Sami [Ecole Polytechnique de Montreal, QC (Canada). Dept. de Genie Informatique et Genie Logiciel; Despres, Philippe [Centre Hospitalier Univ. de Quebec, QC (Canada). Dept. de Radio-Oncologie

2011-07-01

The present work proposes a promising iterative reconstruction technique designed specifically for X-ray transmission computed tomography (CT). The main objective is to reduce diagnostic radiation dose through the reduction of the number of CT projections, while preserving image quality. The second objective is to provide a fast implementation compatible with clinical activities. The proposed tomographic reconstruction technique is a combination of the Ordered Subsets Convex (OSC) algorithm and the Total Variation minimization (TV) regularization technique. The results in terms of image quality and computational speed are discussed. Using this technique, it was possible to obtain reconstructed slices of relatively good quality with as few as 100 projections, leading to potential dose reduction factors of up to an order of magnitude depending on the application. The algorithm was implemented on a Graphical Processing Unit (GPU) and yielded reconstruction times of approximately 185 ms per slice. (orig.)

Order information and free recall: evaluating the item-order hypothesis.

Science.gov (United States)

Mulligan, Neil W; Lozito, Jeffrey P

2007-05-01

The item-order hypothesis proposes that order information plays an important role in recall from long-term memory, and it is commonly used to account for the moderating effects of experimental design in memory research. Recent research (Engelkamp, Jahn, & Seiler, 2003; McDaniel, DeLosh, & Merritt, 2000) raises questions about the assumptions underlying the item-order hypothesis. Four experiments tested these assumptions by examining the relationship between free recall and order memory for lists of varying length (8, 16, or 24 unrelated words or pictures). Some groups were given standard free-recall instructions, other groups were explicitly instructed to use order information in free recall, and other groups were given free-recall tests intermixed with tests of order memory (order reconstruction). The results for short lists were consistent with the assumptions of the item-order account. For intermediate-length lists, explicit order instructions and intermixed order tests made recall more reliant on order information, but under standard conditions, order information played little role in recall. For long lists, there was little evidence that order information contributed to recall. In sum, the assumptions of the item-order account held for short lists, received mixed support with intermediate lists, and received no support for longer lists.

Mastectomy Skin Necrosis After Breast Reconstruction: A Comparative Analysis Between Autologous Reconstruction and Implant-Based Reconstruction.

Science.gov (United States)

Sue, Gloria R; Lee, Gordon K

2018-05-01

Mastectomy skin necrosis is a significant problem after breast reconstruction. We sought to perform a comparative analysis on this complication between patients undergoing autologous breast reconstruction and patients undergoing 2-stage expander implant breast reconstruction. A retrospective review was performed on consecutive patients undergoing autologous breast reconstruction or 2-stage expander implant breast reconstruction by the senior author from 2006 through 2015. Patient demographic factors including age, body mass index, history of diabetes, history of smoking, and history of radiation to the breast were collected. Our primary outcome measure was mastectomy skin necrosis. Fisher exact test was used for statistical analysis between the 2 patient cohorts. The treatment patterns of mastectomy skin necrosis were then analyzed. We identified 204 patients who underwent autologous breast reconstruction and 293 patients who underwent 2-stage expander implant breast reconstruction. Patients undergoing autologous breast reconstruction were older, heavier, more likely to have diabetes, and more likely to have had prior radiation to the breast compared with patients undergoing implant-based reconstruction. The incidence of mastectomy skin necrosis was 30.4% of patients in the autologous group compared with only 10.6% of patients in the tissue expander group (P care in the autologous group, only 3.2% were treated with local wound care in the tissue expander group (P skin necrosis is significantly more likely to occur after autologous breast reconstruction compared with 2-stage expander implant-based breast reconstruction. Patients with autologous reconstructions are more readily treated with local wound care compared with patients with tissue expanders, who tended to require operative treatment of this complication. Patients considering breast reconstruction should be counseled appropriately regarding the differences in incidence and management of mastectomy skin

AVERAGE FLUXES FROM HETEROGENEOUS VEGETATED REGIONS

NARCIS (Netherlands)

KLAASSEN, W

Using a surface-layer model, fluxes of heat and momentum have been calculated for flat regions with regularly spaced step changes in surface roughness and stomatal resistance. The distance between successive step changes is limited to 10 km in order to fill the gap between micro-meteorological

Deuterium-induced nanostructure formation on tungsten exposed to high-flux plasma

Energy Technology Data Exchange (ETDEWEB)

Xu, H.Y., E-mail: donaxu@163.com [Key Laboratory of Advanced Materials, Department of Materials Science and Engineering, Tsinghua University, Beijing 100084 (China); Science and Technology on Surface Physics and Chemistry Laboratory, Mianyang, Sichuan 621907 (China); De Temmerman, G. [FOM Institute DIFFER, Dutch Institute For Fundamental Energy Research, Ass. EURATOM-FOM, Trilateral Euregio Cluster, Postbus 1207, 3430BE Nieuwegein (Netherlands); ITER Organization, Route de Vinon-sur-Verdon CS 90046-13067, St Paul Lez Durance Cedex (France); Luo, G.-N. [Institute of Plasma Physics, Chinese Academy of Sciences, Hefei, Anhui 230031 (China); Jia, Y.Z.; Yuan, Y.; Fu, B.Q.; Godfrey, A. [Key Laboratory of Advanced Materials, Department of Materials Science and Engineering, Tsinghua University, Beijing 100084 (China); Liu, W., E-mail: liuw@mail.tsinghua.edu.cn [Key Laboratory of Advanced Materials, Department of Materials Science and Engineering, Tsinghua University, Beijing 100084 (China)

2015-08-15

Surface topography of polycrystalline tungsten (W) have been examined after exposure to a low-energy (38 eV/D), high-flux (∼1.1–1.5 × 10{sup 24} m{sup −2} s{sup −1}) deuterium plasma in the Pilot-PSI linear plasma device. The methods used were scanning electron microscopy (SEM), transmission electron microscopy (TEM), positron annihilation Doppler broadening (PADB) and grazing incident X-ray diffraction (GI-XRD). After exposure to high flux D plasma, blisters and nanostructures are formed on the W surface. Generation of defects was evidenced by PADB, while high stress and mixture of phases were detected in depth of 50 nm by GI-XRD. TEM observation revealed fluctuations and disordered microstructure on the outmost surface layer. Based on these results, surface reconstruction is considered as a possible mechanism for the formation of defects and nanostructures.

High-order noise analysis for low dose iterative image reconstruction methods: ASIR, IRIS, and MBAI

Science.gov (United States)

Do, Synho; Singh, Sarabjeet; Kalra, Mannudeep K.; Karl, W. Clem; Brady, Thomas J.; Pien, Homer

2011-03-01

Iterative reconstruction techniques (IRTs) has been shown to suppress noise significantly in low dose CT imaging. However, medical doctors hesitate to accept this new technology because visual impression of IRT images are different from full-dose filtered back-projection (FBP) images. Most common noise measurements such as the mean and standard deviation of homogeneous region in the image that do not provide sufficient characterization of noise statistics when probability density function becomes non-Gaussian. In this study, we measure L-moments of intensity values of images acquired at 10% of normal dose and reconstructed by IRT methods of two state-of-art clinical scanners (i.e., GE HDCT and Siemens DSCT flash) by keeping dosage level identical to each other. The high- and low-dose scans (i.e., 10% of high dose) were acquired from each scanner and L-moments of noise patches were calculated for the comparison.

Capabilities of using white x-rays for the reconstruction of surface morphology from coherent reflectivity

Energy Technology Data Exchange (ETDEWEB)

Sant, Tushar, E-mail: tushar@physik.uni-siegen.de [Solid State Physics Group, University of Siegen, 57068 Siegen (Germany); Panzner, Tobias [Paul Scherrer Institute (Switzerland); Pietsch, Ullrich [Solid State Physics Group, University of Siegen, 57068 Siegen (Germany)

2010-10-15

We present a new method to reconstruct the surface profile of a sample from coherent reflectivity data of a white x-ray beam experiment. As an example the surface profile of a laterally confined silicon wafer has been reconstructed quantitatively from static speckle measurements using white coherent x-rays from a bending magnet in the energy range between 5 < E < 20 keV. As a consequence of using white radiation, speckles appear in addition to the Airy pattern caused by scattering at the entrance pinhole. Nevertheless, the surface profile of a triangularly shaped specimen was reconstructed considering sufficient oversampling between the beam-footprint and the effective sample width. For the profile reconstruction the Error-Reduction phase retrieval algorithm was modified by including the spectral illumination function and a Fresnel propagator term. The simultaneous use of different x-ray energies having different penetration depth provides information on the evolution of the surface profile from the near-surface towards the bulk. The limitations of present experiment can be overcome using white or pink radiation from a source with higher photon flux.

Trends in Materials Science for Ligament Reconstruction.

Science.gov (United States)

Sava, Oana Roxana; Sava, Daniel Florin; Radulescu, Marius; Albu, Madalina Georgiana; Ficai, Denisa; Veloz-Castillo, Maria Fernanda; Mendez-Rojas, Miguel Angel; Ficai, Anton

2017-01-01

The number of ligament injuries increases every year and concomitantly the need for materials or systems that can reconstruct the ligament. Limitations imposed by autografts and allografts in ligament reconstruction together with the advances in materials science and biology have attracted a lot of interest for developing systems and materials for ligament replacement or reconstruction. This review intends to synthesize the major steps taken in the development of polymer-based materials for anterior cruciate ligament, their advantages and drawbacks and the results of different in vitro and in vivo tests. Until present, there is no successful polymer system for ligament reconstruction implanted in humans. The developing field of synthetic polymers for ligament reconstruction still has a lot of potential. In addition, several nano-structured materials, made of nanofibers or in the form of ceramic/polymeric nanocomposites, are attracting the interest of several groups due to their potential use as engineered scaffolds that mimic the native environment of cells, increasing the chances for tissue regeneration. Here, we review the last 15 years of literature in order to obtain a better understanding on the state-of-the-art that includes the usage of nano- and poly-meric materials for ligament reconstruction, and to draw perspectives on the future development of the field. Copyright© Bentham Science Publishers; For any queries, please email at epub@benthamscience.org.

Quantitative ptychographic reconstruction by applying a probe constraint

Science.gov (United States)

Reinhardt, J.; Schroer, C. G.

2018-04-01

The coherent scanning technique X-ray ptychography has become a routine tool for high-resolution imaging and nanoanalysis in various fields of research such as chemistry, biology or materials science. Often the ptychographic reconstruction results are analysed in order to yield absolute quantitative values for the object transmission and illuminating probe function. In this work, we address a common ambiguity encountered in scaling the object transmission and probe intensity via the application of an additional constraint to the reconstruction algorithm. A ptychographic measurement of a model sample containing nanoparticles is used as a test data set against which to benchmark in the reconstruction results depending on the type of constraint used. Achieving quantitative absolute values for the reconstructed object transmission is essential for advanced investigation of samples that are changing over time, e.g., during in-situ experiments or in general when different data sets are compared.

Nonoscillatory shock capturing scheme using flux limited dissipation

International Nuclear Information System (INIS)

Jameson, A.

1985-01-01

A method for modifying the third order dissipative terms by the introduction of flux limiters is proposed. The first order dissipative terms can then be eliminated entirely, and in the case of a scalar conservation law the scheme is converted into a total variation diminishing scheme provided that an appropriate value is chosen for the dissipative coefficient. Particular attention is given to: (1) the treatment of the scalar conservation law; (2) the treatment of the Euler equations for inviscid compressible flow; (3) the boundary conditions; and (4) multistage time stepping and multigrid schemes. Numerical results for transonic flows suggest that a central difference scheme augmented by flux limited dissipative terms can lead to an effective nonoscillatory shock capturing method. 20 references

Wavefront reconstruction using computer-generated holograms

Science.gov (United States)

Schulze, Christian; Flamm, Daniel; Schmidt, Oliver A.; Duparré, Michael

2012-02-01

We propose a new method to determine the wavefront of a laser beam, based on modal decomposition using computer-generated holograms (CGHs). Thereby the beam under test illuminates the CGH with a specific, inscribed transmission function that enables the measurement of modal amplitudes and phases by evaluating the first diffraction order of the hologram. Since we use an angular multiplexing technique, our method is innately capable of real-time measurements of amplitude and phase, yielding the complete information about the optical field. A measurement of the Stokes parameters, respectively of the polarization state, provides the possibility to calculate the Poynting vector. Two wavefront reconstruction possibilities are outlined: reconstruction from the phase for scalar beams and reconstruction from the Poynting vector for inhomogeneously polarized beams. To quantify single aberrations, the reconstructed wavefront is decomposed into Zernike polynomials. Our technique is applied to beams emerging from different kinds of multimode optical fibers, such as step-index, photonic crystal and multicore fibers, whereas in this work results are exemplarily shown for a step-index fiber and compared to a Shack-Hartmann measurement that serves as a reference.

The structure of reconstructed chalcopyrite surfaces

Science.gov (United States)

Thinius, Sascha; Islam, Mazharul M.; Bredow, Thomas

2018-03-01

Chalcopyrite (CuFeS2) surfaces are of major interest for copper exploitation in aqueous solution, called leaching. Since leaching is a surface process knowledge of the surface structure, bonding pattern and oxidation states is important for improving the efficiency. At present such information is not available from experimental studies. Therefore a detailed computational study of chalcopyrite surfaces is performed. The structures of low-index stoichiometric chalcopyrite surfaces {hkl} h, k, l ∈ {0, 1, 2} have been studied with density functional theory (DFT) and global optimization strategies. We have applied ab initio molecular dynamics (MD) in combination with simulated annealing (SA) in order to explore possible reconstructions via a minima hopping (MH) algorithm. In almost all cases reconstruction involving substantial rearrangement has occurred accompanied by reduction of the surface energy. The analysis of the change in the coordination sphere and migration during reconstruction reveals that S-S dimers are formed on the surface. Further it was observed that metal atoms near the surface move toward the bulk forming metal alloys passivated by sulfur. The obtained surface energies of reconstructed surfaces are in the range of 0.53-0.95 J/m2.

Equilibrium reconstruction in the TCA/Br tokamak

International Nuclear Information System (INIS)

Sa, Wanderley Pires de

1996-01-01

The accurate and rapid determination of the Magnetohydrodynamic (MHD) equilibrium configuration in tokamaks is a subject for the magnetic confinement of the plasma. With the knowledge of characteristic plasma MHD equilibrium parameters it is possible to control the plasma position during its formation using feed-back techniques. It is also necessary an on-line analysis between successive discharges to program external parameters for the subsequent discharges. In this work it is investigated the MHD equilibrium configuration reconstruction of the TCA/BR tokamak from external magnetic measurements, using a method that is able to fast determine the main parameters of discharge. The thesis has two parts. Firstly it is presented the development of an equilibrium code that solves de Grad-Shafranov equation for the TCA/BR tokamak geometry. Secondly it is presented the MHD equilibrium reconstruction process from external magnetic field and flux measurements using the Function Parametrization FP method. this method. This method is based on the statistical analysis of a database of simulated equilibrium configurations, with the goal of obtaining a simple relationship between the parameters that characterize the equilibrium and the measurements. The results from FP are compared with conventional methods. (author)

A Kalman filter technique applied for medical image reconstruction

International Nuclear Information System (INIS)

Goliaei, S.; Ghorshi, S.; Manzuri, M. T.; Mortazavi, M.

2011-01-01

Medical images contain information about vital organic tissues inside of human body and are widely used for diagnoses of disease or for surgical purposes. Image reconstruction is essential for medical images for some applications such as suppression of noise or de-blurring the image in order to provide images with better quality and contrast. Due to vital rule of image reconstruction in medical sciences the corresponding algorithms with better efficiency and higher speed is desirable. Most algorithms in image reconstruction are operated on frequency domain such as the most popular one known as filtered back projection. In this paper we introduce a Kalman filter technique which is operated in time domain for medical image reconstruction. Results indicated that as the number of projection increases in both normal collected ray sum and the collected ray sum corrupted by noise the quality of reconstructed image becomes better in terms of contract and transparency. It is also seen that as the number of projection increases the error index decreases.

A combined reconstruction-classification method for diffuse optical tomography

Energy Technology Data Exchange (ETDEWEB)

Hiltunen, P [Department of Biomedical Engineering and Computational Science, Helsinki University of Technology, PO Box 3310, FI-02015 TKK (Finland); Prince, S J D; Arridge, S [Department of Computer Science, University College London, Gower Street London, WC1E 6B (United Kingdom)], E-mail: petri.hiltunen@tkk.fi, E-mail: s.prince@cs.ucl.ac.uk, E-mail: s.arridge@cs.ucl.ac.uk

2009-11-07

We present a combined classification and reconstruction algorithm for diffuse optical tomography (DOT). DOT is a nonlinear ill-posed inverse problem. Therefore, some regularization is needed. We present a mixture of Gaussians prior, which regularizes the DOT reconstruction step. During each iteration, the parameters of a mixture model are estimated. These associate each reconstructed pixel with one of several classes based on the current estimate of the optical parameters. This classification is exploited to form a new prior distribution to regularize the reconstruction step and update the optical parameters. The algorithm can be described as an iteration between an optimization scheme with zeroth-order variable mean and variance Tikhonov regularization and an expectation-maximization scheme for estimation of the model parameters. We describe the algorithm in a general Bayesian framework. Results from simulated test cases and phantom measurements show that the algorithm enhances the contrast of the reconstructed images with good spatial accuracy. The probabilistic classifications of each image contain only a few misclassified pixels.

Reconstruction of temporal variations of evapotranspiration using instantaneous estimates at the time of satellite overpass

Directory of Open Access Journals (Sweden)

E. Delogu

2012-08-01

Full Text Available Evapotranspiration estimates can be derived from remote sensing data and ancillary, mostly meterorological, information. For this purpose, two types of methods are classically used: the first type estimates a potential evapotranspiration rate from vegetation indices, and adjusts this rate according to water availability derived from either a surface temperature index or a first guess obtained from a rough estimate of the water budget, while the second family of methods relies on the link between the surface temperature and the latent heat flux through the surface energy budget. The latter provides an instantaneous estimate at the time of satellite overpass. In order to compute daily evapotranspiration, one needs an extrapolation algorithm. Since no image is acquired during cloudy conditions, these methods can only be applied during clear sky days. In order to derive seasonal evapotranspiration, one needs an interpolation method. Two combined interpolation/extrapolation methods based on the self preservation of evaporative fraction and the stress factor are compared to reconstruct seasonal evapotranspiration from instantaneous measurements acquired in clear sky conditions. Those measurements are taken from instantaneous latent heat flux from 11 datasets in Southern France and Morocco. Results show that both methods have comparable performances with a clear advantage for the evaporative fraction for datasets with several water stress events. Both interpolation algorithms tend to underestimate evapotranspiration due to the energy limiting conditions that prevail during cloudy days. Taking into account the diurnal variations of the evaporative fraction according to an empirical relationship derived from a previous study improved the performance of the extrapolation algorithm and therefore the retrieval of the seasonal evapotranspiration for all but one datasets.

Muon reconstruction with a geometrical model in JUNO

Science.gov (United States)

Genster, C.; Schever, M.; Ludhova, L.; Soiron, M.; Stahl, A.; Wiebusch, C.

2018-03-01

The Jiangmen Neutrino Underground Observatory (JUNO) is a 20 kton liquid scintillator detector currently under construction near Kaiping in China. The physics program focuses on the determination of the neutrino mass hierarchy with reactor anti-neutrinos. For this purpose, JUNO is located 650 m underground with a distance of 53 km to two nuclear power plants. As a result, it is exposed to a muon flux that requires a precise muon reconstruction to make a veto of cosmogenic backgrounds viable. Established muon tracking algorithms use time residuals to a track hypothesis. We developed an alternative muon tracking algorithm that utilizes the geometrical shape of the fastest light. It models the full shape of the first, direct light produced along the muon track. From the intersection with the spherical PMT array, the track parameters are extracted with a likelihood fit. The algorithm finds a selection of PMTs based on their first hit times and charges. Subsequently, it fits on timing information only. On a sample of through-going muons with a full simulation of readout electronics, we report a spatial resolution of 20 cm of distance from the detector's center and an angular resolution of 1.6o over the whole detector. Additionally, a dead time estimation is performed to measure the impact of the muon veto. Including the step of waveform reconstruction on top of the track reconstruction, a loss in exposure of only 4% can be achieved compared to the case of a perfect tracking algorithm. When including only the PMT time resolution, but no further electronics simulation and waveform reconstruction, the exposure loss is only 1%.

Modern Estimates of Global Water Cycle Fluxes

Science.gov (United States)

Rodell, M.; Beaudoing, H. K.; L'Ecuyer, T. S.; Olson, W. S.

2014-12-01

The goal of the first phase of the NASA Energy and Water Cycle Study (NEWS) Water and Energy Cycle Climatology project was to develop "state of the global water cycle" and "state of the global energy cycle" assessments based on data from modern ground and space based observing systems and data integrating models. Here we describe results of the water cycle assessment, including mean annual and monthly fluxes over continents and ocean basins during the first decade of the millennium. To the extent possible, the water flux estimates are based on (1) satellite measurements and (2) data-integrating models. A careful accounting of uncertainty in each flux was applied within a routine that enforced multiple water and energy budget constraints simultaneously in a variational framework, in order to produce objectively-determined, optimized estimates. Simultaneous closure of the water and energy budgets caused the ocean evaporation and precipitation terms to increase by about 10% and 5% relative to the original estimates, mainly because the energy budget required turbulent heat fluxes to be substantially larger in order to balance net radiation. In the majority of cases, the observed annual, surface and atmospheric water budgets over the continents and oceans close with much less than 10% residual. Observed residuals and optimized uncertainty estimates are considerably larger for monthly surface and atmospheric water budget closure, often nearing or exceeding 20% in North America, Eurasia, Australia and neighboring islands, and the Arctic and South Atlantic Oceans. The residuals in South America and Africa tend to be smaller, possibly because cold land processes are a non-issue. Fluxes are poorly observed over the Arctic Ocean, certain seas, Antarctica, and the Australasian and Indonesian Islands, leading to reliance on atmospheric analysis estimates. Other details of the study and future directions will be discussed.

AOF LTAO mode: reconstruction strategy and first test results

Science.gov (United States)

Oberti, Sylvain; Kolb, Johann; Le Louarn, Miska; La Penna, Paolo; Madec, Pierre-Yves; Neichel, Benoit; Sauvage, Jean-François; Fusco, Thierry; Donaldson, Robert; Soenke, Christian; Suárez Valles, Marcos; Arsenault, Robin

2016-07-01

GALACSI is the Adaptive Optics (AO) system serving the instrument MUSE in the framework of the Adaptive Optics Facility (AOF) project. Its Narrow Field Mode (NFM) is a Laser Tomography AO (LTAO) mode delivering high resolution in the visible across a small Field of View (FoV) of 7.5" diameter around the optical axis. From a reconstruction standpoint, GALACSI NFM intends to optimize the correction on axis by estimating the turbulence in volume via a tomographic process, then projecting the turbulence profile onto one single Deformable Mirror (DM) located in the pupil, close to the ground. In this paper, the laser tomographic reconstruction process is described. Several methods (virtual DM, virtual layer projection) are studied, under the constraint of a single matrix vector multiplication. The pseudo-synthetic interaction matrix model and the LTAO reconstructor design are analysed. Moreover, the reconstruction parameter space is explored, in particular the regularization terms. Furthermore, we present here the strategy to define the modal control basis and split the reconstruction between the Low Order (LO) loop and the High Order (HO) loop. Finally, closed loop performance obtained with a 3D turbulence generator will be analysed with respect to the most relevant system parameters to be tuned.

Methods and applications in high flux neutron imaging; Methoden und Anwendungen fuer bildgebende Verfahren mit hohen Neutronenfluessen

Energy Technology Data Exchange (ETDEWEB)

Ballhausen, H.

2007-02-07

This treatise develops new methods for high flux neutron radiography and high flux neutron tomography and describes some of their applications in actual experiments. Instead of single images, time series can be acquired with short exposure times due to the available high intensity. To best use the increased amount of information, new estimators are proposed, which extract accurate results from the recorded ensembles, even if the individual piece of data is very noisy and in addition severely affected by systematic errors such as an influence of gamma background radiation. The spatial resolution of neutron radiographies, usually limited by beam divergence and inherent resolution of the scintillator, can be significantly increased by scanning the sample with a pinhole-micro-collimator. This technique circumvents any limitations in present detector design and, due to the available high intensity, could be successfully tested. Imaging with scattered neutrons as opposed to conventional total attenuation based imaging determines separately the absorption and scattering cross sections within the sample. For the first time even coherent angle dependent scattering could be visualized space-resolved. New applications of high flux neutron imaging are presented, such as materials engineering experiments on innovative metal joints, time-resolved tomography on multilayer stacks of fuel cells under operation, and others. A new implementation of an algorithm for the algebraic reconstruction of tomography data executes even in case of missing information, such as limited angle tomography, and returns quantitative reconstructions. The setup of the world-leading high flux radiography and tomography facility at the Institut Laue-Langevin is presented. A comprehensive appendix covers the physical and technical foundations of neutron imaging. (orig.)

STUDY OF UREMIC TOXIN FLUXES ACROSS NANOFABRICATED HEMODIALYSIS MEMBRANES USING IRREVERSIBLE THERMODYNAMICS

Directory of Open Access Journals (Sweden)

Assem Hedayat

2013-03-01

Conclusions: Nanofabricated hemodialysis membranes with a reduced thickness and an applied electric potential can enhance the effective diffusivity and electro-migration flux of the respective uremic toxins by 3 orders of magnitude as compared to those passing through the high flux hemodialyzer.

Low energy neutral particle fluxes in the JET divertor

International Nuclear Information System (INIS)

Reichle, R.; Horton, L.D.; Ingesson, L.C.; Jaeckel, H.J.; McCormick, G.K.; Loarte, A.; Simonini, R.; Stamp, M.F.

1997-01-01

First measurements are presented of the total power loss through neutral particles and their average energy in the JET divertor. The method used distinguishes between the heat flux and the electromagnetic radiation on bolometers. This is done by comparing measurements from inside the divertor either with opposite lines of sight or with a tomographic reconstruction of the radiation. The typical value of the total power loss in the divertor through neutrals is about 1 MW. The average energy of the neutral particles at the inner divertor leg is 1.5-3 eV when detachment is in progress, which agrees with EDGE2D/NIMBUS modelling. (orig.)

Sedimentary record of water column trophic conditions and sediment carbon fluxes in a tropical water reservoir (Valle de Bravo, Mexico).

Science.gov (United States)

Carnero-Bravo, Vladislav; Merino-Ibarra, Martín; Ruiz-Fernández, Ana Carolina; Sanchez-Cabeza, Joan Albert; Ghaleb, Bassam

2015-03-01

Valle de Bravo (VB) is the main water reservoir of the Cutzamala hydraulic system, which provides 40% of the drinking water consumed in the Mexico City Metropolitan Area and exhibits symptoms of eutrophication. Nutrient (C, N and P) concentrations were determined in two sediment cores to reconstruct the water column trophic evolution of the reservoir and C fluxes since its creation in 1947. Radiometric methods ((210)Pb and (137)Cs) were used to obtain sediment chronologies, using the presence of pre-reservoir soil layers in one of the cores as an independent chronological marker. Mass accumulation rates ranged from 0.12 to 0.56 g cm(-2) year(-1) and total organic carbon (TOC) fluxes from 122 to 380 g m(-2) year(-1). Total N ranged 4.9-48 g m(-2) year(-1), and total P 0.6-4.2 g m(-2) year(-1). The sedimentary record shows that all three (C, N and P) fluxes increased significantly after 1991, in good agreement with the assessed trophic evolution of VB and with historic and recent real-time measurements. In the recent years (1992-2006), the TOC flux to the bottom of VB (average 250 g m(-2) year(-1), peaks 323 g m(-2) year(-1)) is similar to that found in highly eutrophic reservoirs and impoundments. Over 1/3 of the total C burial since dam construction, circa 70,000 t, has occurred in this recent period. These results highlight the usefulness of the reconstruction of carbon and nutrient fluxes from the sedimentary record to assess carbon burial and its temporal evolution in freshwater ecosystems.

Temperature and heat flux changes at the base of Laurentide ice sheet inferred from geothermal data (evidence from province of Alberta, Canada)

Czech Academy of Sciences Publication Activity Database

Demezhko, D.; Gornostaeva, A.; Majorowicz, J.; Šafanda, Jan

2018-01-01

Roč. 107, č. 1 (2018), s. 113-121 ISSN 1437-3254 Institutional support: RVO:67985530 Keywords : borehole temperature * paleoclimate reconstruction * surface heat flux * ground surface temperature * Laurentide ice sheet Subject RIV: DC - Siesmology, Volcanology, Earth Structure Impact factor: 2.283, year: 2016

Radiation dose reduction in medical x-ray CT via Fourier-based iterative reconstruction.

Science.gov (United States)

Fahimian, Benjamin P; Zhao, Yunzhe; Huang, Zhifeng; Fung, Russell; Mao, Yu; Zhu, Chun; Khatonabadi, Maryam; DeMarco, John J; Osher, Stanley J; McNitt-Gray, Michael F; Miao, Jianwei

2013-03-01

A Fourier-based iterative reconstruction technique, termed Equally Sloped Tomography (EST), is developed in conjunction with advanced mathematical regularization to investigate radiation dose reduction in x-ray CT. The method is experimentally implemented on fan-beam CT and evaluated as a function of imaging dose on a series of image quality phantoms and anonymous pediatric patient data sets. Numerical simulation experiments are also performed to explore the extension of EST to helical cone-beam geometry. EST is a Fourier based iterative algorithm, which iterates back and forth between real and Fourier space utilizing the algebraically exact pseudopolar fast Fourier transform (PPFFT). In each iteration, physical constraints and mathematical regularization are applied in real space, while the measured data are enforced in Fourier space. The algorithm is automatically terminated when a proposed termination criterion is met. Experimentally, fan-beam projections were acquired by the Siemens z-flying focal spot technology, and subsequently interleaved and rebinned to a pseudopolar grid. Image quality phantoms were scanned at systematically varied mAs settings, reconstructed by EST and conventional reconstruction methods such as filtered back projection (FBP), and quantified using metrics including resolution, signal-to-noise ratios (SNRs), and contrast-to-noise ratios (CNRs). Pediatric data sets were reconstructed at their original acquisition settings and additionally simulated to lower dose settings for comparison and evaluation of the potential for radiation dose reduction. Numerical experiments were conducted to quantify EST and other iterative methods in terms of image quality and computation time. The extension of EST to helical cone-beam CT was implemented by using the advanced single-slice rebinning (ASSR) method. Based on the phantom and pediatric patient fan-beam CT data, it is demonstrated that EST reconstructions with the lowest scanner flux setting of 39 m

Radiation dose reduction in medical x-ray CT via Fourier-based iterative reconstruction

International Nuclear Information System (INIS)

Fahimian, Benjamin P.; Zhao Yunzhe; Huang Zhifeng; Fung, Russell; Zhu Chun; Miao Jianwei; Mao Yu; Khatonabadi, Maryam; DeMarco, John J.; McNitt-Gray, Michael F.; Osher, Stanley J.

2013-01-01

scanner flux setting of 39 mAs produce comparable image quality, resolution, and contrast relative to FBP with the 140 mAs flux setting. Compared to the algebraic reconstruction technique and the expectation maximization statistical reconstruction algorithm, a significant reduction in computation time is achieved with EST. Finally, numerical experiments on helical cone-beam CT data suggest that the combination of EST and ASSR produces reconstructions with higher image quality and lower noise than the Feldkamp Davis and Kress (FDK) method and the conventional ASSR approach. Conclusions: A Fourier-based iterative method has been applied to the reconstruction of fan-bean CT data with reduced x-ray fluence. This method incorporates advantageous features in both real and Fourier space iterative schemes: using a fast and algebraically exact method to calculate forward projection, enforcing the measured data in Fourier space, and applying physical constraints and flexible regularization in real space. Our results suggest that EST can be utilized for radiation dose reduction in x-ray CT via the readily implementable technique of lowering mAs settings. Numerical experiments further indicate that EST requires less computation time than several other iterative algorithms and can, in principle, be extended to helical cone-beam geometry in combination with the ASSR method.

A stable and high-order accurate discontinuous Galerkin based splitting method for the incompressible Navier-Stokes equations

Science.gov (United States)

Piatkowski, Marian; Müthing, Steffen; Bastian, Peter

2018-03-01

In this paper we consider discontinuous Galerkin (DG) methods for the incompressible Navier-Stokes equations in the framework of projection methods. In particular we employ symmetric interior penalty DG methods within the second-order rotational incremental pressure correction scheme. The major focus of the paper is threefold: i) We propose a modified upwind scheme based on the Vijayasundaram numerical flux that has favourable properties in the context of DG. ii) We present a novel postprocessing technique in the Helmholtz projection step based on H (div) reconstruction of the pressure correction that is computed locally, is a projection in the discrete setting and ensures that the projected velocity satisfies the discrete continuity equation exactly. As a consequence it also provides local mass conservation of the projected velocity. iii) Numerical results demonstrate the properties of the scheme for different polynomial degrees applied to two-dimensional problems with known solution as well as large-scale three-dimensional problems. In particular we address second-order convergence in time of the splitting scheme as well as its long-time stability.

Second-order domain derivative of normal-dependent boundary integrals

KAUST Repository

Balzer, Jonathan

2010-03-17

Numerous reconstruction tasks in (optical) surface metrology allow for a variational formulation. The occurring boundary integrals may be interpreted as shape functions. The paper is concerned with the second-order analysis of such functions. Shape Hessians of boundary integrals are considered difficult to find analytically because they correspond to third-order derivatives of an, in a sense equivalent, domain integral. We complement previous results by considering cost functions depending explicitly on the surface normal. The correctness and practicability of our calculations are verified in the context of a Newton-type shape reconstruction method. © 2010 Birkhäuser / Springer Basel AG.

Reconstructing solar magnetic fields from historical observations. II. Testing the surface flux transport model

Science.gov (United States)

Virtanen, I. O. I.; Virtanen, I. I.; Pevtsov, A. A.; Yeates, A.; Mursula, K.

2017-07-01

Aims: We aim to use the surface flux transport model to simulate the long-term evolution of the photospheric magnetic field from historical observations. In this work we study the accuracy of the model and its sensitivity to uncertainties in its main parameters and the input data. Methods: We tested the model by running simulations with different values of meridional circulation and supergranular diffusion parameters, and studied how the flux distribution inside active regions and the initial magnetic field affected the simulation. We compared the results to assess how sensitive the simulation is to uncertainties in meridional circulation speed, supergranular diffusion, and input data. We also compared the simulated magnetic field with observations. Results: We find that there is generally good agreement between simulations and observations. Although the model is not capable of replicating fine details of the magnetic field, the long-term evolution of the polar field is very similar in simulations and observations. Simulations typically yield a smoother evolution of polar fields than observations, which often include artificial variations due to observational limitations. We also find that the simulated field is fairly insensitive to uncertainties in model parameters or the input data. Due to the decay term included in the model the effects of the uncertainties are somewhat minor or temporary, lasting typically one solar cycle.

Passive electromagnetic NDE for mechanical damage inspection by detecting leakage magnetic flux. (I. Reconstruction of magnetic charges from detected field signals)

International Nuclear Information System (INIS)

Chen, Zhenmao; Aoto, Kazumi; Kato, Syoichi

1999-07-01

In this report, reconstruction of magnetic charges induced by mechanical damages in a test piece of SUS304 stainless steel is performed as a part of efforts to establish a passive nondestructive testing method on the basis of the inspection of leakage magnetic field. The approach for solving this typical ill-posed inverse problem is selected as a way in the least square method category. Concerning the ill-poseness of the system of equations, an iteration algorithm is adopted to its solving in which the designations of initial profile, the weight coefficients and the total number of iterations are taken as means of regularization. From examples using simulated input data, it is verified that the approach gives good reconstruction results in case of signals with a relative high S/N ratio. For improving the robustness of the proposed method, a Galerkin procedure with base functions chosen as the Daubechies' wavelet is also introduced for discretizing the governing equation. By comparing the reconstruction results of the least square method and those using wavelet discretization, it is found that the wavelet used approach is more feasible in the inversion of noise polluted signals. Reconstruction of 1-D and 2-D magnetic charges with the least square strategy and reconstruction of an 1-D problem with the wavelet used method are carried out from both simulated and measured magnetic field signals which are used as the validation of the proposed inversion strategy. (author)

Reconstruction of Undersampled Atomic Force Microscopy Images

DEFF Research Database (Denmark)

Jensen, Tobias Lindstrøm; Arildsen, Thomas; Østergaard, Jan

2013-01-01

Atomic force microscopy (AFM) is one of the most advanced tools for high-resolution imaging and manipulation of nanoscale matter. Unfortunately, standard AFM imaging requires a timescale on the order of seconds to minutes to acquire an image which makes it complicated to observe dynamic processes....... Moreover, it is often required to take several images before a relevant observation region is identified. In this paper we show how to significantly reduce the image acquisition time by undersampling. The reconstruction of an undersampled AFM image can be viewed as an inpainting, interpolating problem...... should be reconstructed using interpolation....

Second-order generalized perturbation theory for source-driven systems

International Nuclear Information System (INIS)

Greenspan, E.; Gilai, D.; Oblow, E.M.

1978-01-01

A second-order generalized perturbation theory (GPT) for the effect of multiple system variations on a general flux functional in source-driven systems is derived. The derivation is based on a functional Taylor series in which second-order derivatives are retained. The resulting formulation accounts for the nonlinear effect of a given variation accurate to third order in the flux and adjoint perturbations. It also accounts for the effect of interaction between any number of variations. The new formulation is compared with exact perturbation theory as well as with perturbation theory for altered systems. The usefulnes of the second-order GPT formulation is illustrated by applying it to optimization problems. Its applicability to areas of cross-section sensitivity analysis and system design and evaluation is also discussed

Substrate induced ordering of molecular adsorbates on Au(111)

International Nuclear Information System (INIS)

Schott, J.H.; White, H.S.; Arana, C.R.

1992-01-01

Using scanning tunneling microscopy in dimethylformate, [Ru(bpy) 2 (bpy-(CH 2 ) x -bpy) 2+ ] (x = 4 and 5) monolayers adsorbed on the unreconstructed and √3 x 22 reconstructed surfaces of Au(111) were imaged in this paper. The substrate had a highly ordered pattern on the reconstructed surface, but random spatial distribution on the unreconstructed surface. 17 refs., 3 figs

Heat transfer and critical heat flux in a asymmetrically heated tube helicoidal flow; Transfert thermique et flux critique dans un ecoulement helicoidal en tube chauffe asymetriquement

Energy Technology Data Exchange (ETDEWEB)

Boscary, J

1995-10-01

The design of plasma facing components is crucial for plasma performance in next fusion reactors. These elements will be submitted to very high heat flux. They will be actively water-cooled by swirl tubes in the subcooled boiling regime. High heat flux experiments were conducted in order to analyse the heat transfer and to evaluate the critical heat flux. Water-cooled mock-ups were one-side heated by an electron beam gun for different thermal-hydraulic conditions. The critical heat flux was detected by an original method based on the isotherm modification on the heated surface. The wall heat transfer law including forced convection and subcooled boiling regimes was established. Numerical calculations of the material heat transfer conduction allowed the non-homogeneous distribution of the wall temperature and of the wall heat flux to be evaluated. The critical heat flux value was defined as the wall maximum heat flux. A critical heat flux model based on the liquid sublayer dryout under a vapor blanket was established. A good agreement with test results was found. (author). 198 refs., 126 figs., 21 tabs.

The PRISM3D paleoenvironmental reconstruction

Science.gov (United States)

Dowsett, H.; Robinson, M.; Haywood, A.M.; Salzmann, U.; Hill, Daniel; Sohl, L.E.; Chandler, M.; Williams, Mark; Foley, K.; Stoll, D.K.

2010-01-01

The Pliocene Research, Interpretation and Synoptic Mapping (PRISM) paleoenvironmental reconstruction is an internally consistent and comprehensive global synthesis of a past interval of relatively warm and stable climate. It is regularly used in model studies that aim to better understand Pliocene climate, to improve model performance in future climate scenarios, and to distinguish model-dependent climate effects. The PRISM reconstruction is constantly evolving in order to incorporate additional geographic sites and environmental parameters, and is continuously refined by independent research findings. The new PRISM three dimensional (3D) reconstruction differs from previous PRISM reconstructions in that it includes a subsurface ocean temperature reconstruction, integrates geochemical sea surface temperature proxies to supplement the faunal-based temperature estimates, and uses numerical models for the first time to augment fossil data. Here we describe the components of PRISM3D and describe new findings specific to the new reconstruction. Highlights of the new PRISM3D reconstruction include removal of Hudson Bay and the Great Lakes and creation of open waterways in locations where the current bedrock elevation is less than 25m above modern sea level, due to the removal of the West Antarctic Ice Sheet and the reduction of the East Antarctic Ice Sheet. The mid-Piacenzian oceans were characterized by a reduced east-west temperature gradient in the equatorial Pacific, but PRISM3D data do not imply permanent El Niño conditions. The reduced equator-to-pole temperature gradient that characterized previous PRISM reconstructions is supported by significant displacement of vegetation belts toward the poles, is extended into the Arctic Ocean, and is confirmed by multiple proxies in PRISM3D. Arctic warmth coupled with increased dryness suggests the formation of warm and salty paleo North Atlantic Deep Water (NADW) and a more vigorous thermohaline circulation system that may

Arctic Sea Level Reconstruction

DEFF Research Database (Denmark)

Svendsen, Peter Limkilde

Reconstruction of historical Arctic sea level is very difficult due to the limited coverage and quality of tide gauge and altimetry data in the area. This thesis addresses many of these issues, and discusses strategies to help achieve a stable and plausible reconstruction of Arctic sea level from...... 1950 to today.The primary record of historical sea level, on the order of several decades to a few centuries, is tide gauges. Tide gauge records from around the world are collected in the Permanent Service for Mean Sea Level (PSMSL) database, and includes data along the Arctic coasts. A reasonable...... amount of data is available along the Norwegian and Russian coasts since 1950, and most published research on Arctic sea level extends cautiously from these areas. Very little tide gauge data is available elsewhere in the Arctic, and records of a length of several decades,as generally recommended for sea...

Poloidal flux requirement: Analysis and application to the Ignitor configuration

International Nuclear Information System (INIS)

Nassi, M.

1993-01-01

The definitions and correlations existing between different terms used by physicists and engineers are clarified in order to deal with the assessment of the poloidal flux requirement in a fusion experiment. The theoretical formulation of both the Faraday and the Poynting methods, for the internal flux evaluation, is briefly reviewed. Heuristic expressions that allow estimates of internal flux consumption are reported for the specific case of an ignition experiment represented by the Ignitor configuration. The analytical and heuristic results for both internal and external poloidal flux requirements are checked against numerical evaluations carried out by using the TSC transport and magnetohydrodynamics code and the TEQ equilibrium code. A fairly good agreement between the different estimates is found. This suggests that simple heuristic expressions can be used to evaluate the poloidal flux requirement of future experiments, even if a detailed simulation of the plasma current penetration process is strongly recommended to correctly assess and optimize the resistive poloidal flux consumption. Finally, the poloidal flux requirement for different plasma scenarios in the Ignitor experiment is compared with the magnetic flux variation that can be delivered by the poloidal field system. 28 refs., 4 figs., 10 tabs

Zooming in on vibronic structure by lowest-value projection reconstructed 4D coherent spectroscopy

Science.gov (United States)

Harel, Elad

2018-05-01

A fundamental goal of chemical physics is an understanding of microscopic interactions in liquids at and away from equilibrium. In principle, this microscopic information is accessible by high-order and high-dimensionality nonlinear optical measurements. Unfortunately, the time required to execute such experiments increases exponentially with the dimensionality, while the signal decreases exponentially with the order of the nonlinearity. Recently, we demonstrated a non-uniform acquisition method based on radial sampling of the time-domain signal [W. O. Hutson et al., J. Phys. Chem. Lett. 9, 1034 (2018)]. The four-dimensional spectrum was then reconstructed by filtered back-projection using an inverse Radon transform. Here, we demonstrate an alternative reconstruction method based on the statistical analysis of different back-projected spectra which results in a dramatic increase in sensitivity and at least a 100-fold increase in dynamic range compared to conventional uniform sampling and Fourier reconstruction. These results demonstrate that alternative sampling and reconstruction methods enable applications of increasingly high-order and high-dimensionality methods toward deeper insights into the vibronic structure of liquids.

Poloidal and toroidal heat flux distribution in the CCT tokamak

International Nuclear Information System (INIS)

Brown, M.L.; Dhir, V.K.; Taylor, R.J.

1990-01-01

Plasma heat flux to the Faraday shield panels of the UCLA Continuous Current Tokamak (CCT) has been measured calorimetrically in order to identify the dominant parameters affecting the spatial distribution of heat deposition. Three heating methods were investigated: audio frequency discharge cleaning, RF heating, and AC ohmic. Significant poloidal asymmetry is present in the heat flux distribution. On the average, the outer panels received 25-30% greater heat flux than the inner ones, with the ratio of maximum to minimum values attaining a difference of more than a factor of 2. As a diagnostic experiment the current to a selected toroidal field coil was reduced in order to locally deflect the toroidal field lines outward in a ripple-like fashion. Greatly enhanced heat deposition (up to a factor of 4) was observed at this location on the outside Faraday panels. The enhancement was greatest for conditions of low toroidal field and low neutral pressure, leading to low plasma densities, for which Coulomb collisions are the smallest. An exponential model based on a heat flux e-folding length describes the experimentally found localization of thermal energy quite adequately. (orig.)

Evaluation of accelerated iterative x-ray CT image reconstruction using floating point graphics hardware

International Nuclear Information System (INIS)

Kole, J S; Beekman, F J

2006-01-01

Statistical reconstruction methods offer possibilities to improve image quality as compared with analytical methods, but current reconstruction times prohibit routine application in clinical and micro-CT. In particular, for cone-beam x-ray CT, the use of graphics hardware has been proposed to accelerate the forward and back-projection operations, in order to reduce reconstruction times. In the past, wide application of this texture hardware mapping approach was hampered owing to limited intrinsic accuracy. Recently, however, floating point precision has become available in the latest generation commodity graphics cards. In this paper, we utilize this feature to construct a graphics hardware accelerated version of the ordered subset convex reconstruction algorithm. The aims of this paper are (i) to study the impact of using graphics hardware acceleration for statistical reconstruction on the reconstructed image accuracy and (ii) to measure the speed increase one can obtain by using graphics hardware acceleration. We compare the unaccelerated algorithm with the graphics hardware accelerated version, and for the latter we consider two different interpolation techniques. A simulation study of a micro-CT scanner with a mathematical phantom shows that at almost preserved reconstructed image accuracy, speed-ups of a factor 40 to 222 can be achieved, compared with the unaccelerated algorithm, and depending on the phantom and detector sizes. Reconstruction from physical phantom data reconfirms the usability of the accelerated algorithm for practical cases

Pollutant transport over complex terrain: Flux and budget calculations for the pollumet field campaign

Science.gov (United States)

Lehning, Michael; Richner, Hans; Kok, Gregory L.

Especially over complex terrain, transport processes dominate the local pollutant concentrations observed. The data gathered during the POLLUMET measuring campaign in 1993 allow a quantitative analysis of the pollutant fluxes and the pollutant budgets. The data include airborne measurements by NCAR's King Air, radio soundings, radar wind profiles, and data from meteorological ground stations. The regions of interest were the rather densely populated Swiss Plateau, which is embedded between the Alps and the Jura Mountains, and a box south of the Alps covering the south Ticino region and parts of northern Italy. An interpolation scheme was developed to reconstruct the wind field from all available measurements. From the wind field and the reconstruction of the concentration field the fluxes into and out of a box with fixed boundaries are calculated. The pollutant budgets are obtained from the sum of the fluxes and considering a mean vertical velocity. To assess the uncertainties introduced through the interpolation of the measurements, an extensive sensitivity analysis is included. The Swiss Plateau exports ozone and nitrogen oxides. The export rates can be interpreted as an ozone accumulation or fraction of 'homemade pollution' between 3 and 10% and require a net production rate of 1-2 ppb h -1. Accumulation of nitrogen oxides amounts to 20-60%. The box south of the Alps imports polluted air from northern Italy. Thus, oxidized nitrogen is not exported but a net production of ozone still occurs at a rate of 1-2 ppb h -1. The interpolated flow and concentration fields are decomposed into the mean over a box-boundary and the deviation from that mean. This allows isolation of the contribution of local circulations and large-scale turbulence to the total flux. It is shown how the local thermotopographic circulations increasingly dominate the transport as typical Alpine topography is approached. Even over the Swiss Plateau, approximately 20 km away from Alpine topography

An Analytical Diffusion–Expansion Model for Forbush Decreases Caused by Flux Ropes

Science.gov (United States)

Dumbović, Mateja; Heber, Bernd; Vršnak, Bojan; Temmer, Manuela; Kirin, Anamarija

2018-06-01

We present an analytical diffusion–expansion Forbush decrease (FD) model ForbMod, which is based on the widely used approach of an initially empty, closed magnetic structure (i.e., flux rope) that fills up slowly with particles by perpendicular diffusion. The model is restricted to explaining only the depression caused by the magnetic structure of the interplanetary coronal mass ejection (ICME). We use remote CME observations and a 3D reconstruction method (the graduated cylindrical shell method) to constrain initial boundary conditions of the FD model and take into account CME evolutionary properties by incorporating flux rope expansion. Several flux rope expansion modes are considered, which can lead to different FD characteristics. In general, the model is qualitatively in agreement with observations, whereas quantitative agreement depends on the diffusion coefficient and the expansion properties (interplay of the diffusion and expansion). A case study was performed to explain the FD observed on 2014 May 30. The observed FD was fitted quite well by ForbMod for all expansion modes using only the diffusion coefficient as a free parameter, where the diffusion parameter was found to correspond to an expected range of values. Our study shows that, in general, the model is able to explain the global properties of an FD caused by a flux rope and can thus be used to help understand the underlying physics in case studies.

Testing a solar coronal magnetic field extrapolation code with the Titov–Démoulin magnetic flux rope model

International Nuclear Information System (INIS)

Jiang, Chao-Wei; Feng, Xue-Shang

2016-01-01

In the solar corona, the magnetic flux rope is believed to be a fundamental structure that accounts for magnetic free energy storage and solar eruptions. Up to the present, the extrapolation of the magnetic field from boundary data has been the primary way to obtain fully three-dimensional magnetic information about the corona. As a result, the ability to reliably recover the coronal magnetic flux rope is important for coronal field extrapolation. In this paper, our coronal field extrapolation code is examined with an analytical magnetic flux rope model proposed by Titov and Démoulin, which consists of a bipolar magnetic configuration holding a semi-circular line-tied flux rope in force-free equilibrium. By only using the vector field at the bottom boundary as input, we test our code with the model in a representative range of parameter space and find that the model field can be reconstructed with high accuracy. In particular, the magnetic topological interfaces formed between the flux rope and the surrounding arcade, i.e., the “hyperbolic flux tube” and “bald patch separatrix surface,” are also reliably reproduced. By this test, we demonstrate that our CESE–MHD–NLFFF code can be applied to recovering the magnetic flux rope in the solar corona as long as the vector magnetogram satisfies the force-free constraints. (paper)

From elementary flux modes to elementary flux vectors: Metabolic pathway analysis with arbitrary linear flux constraints

Science.gov (United States)

Klamt, Steffen; Gerstl, Matthias P.; Jungreuthmayer, Christian; Mahadevan, Radhakrishnan; Müller, Stefan

2017-01-01

Elementary flux modes (EFMs) emerged as a formal concept to describe metabolic pathways and have become an established tool for constraint-based modeling and metabolic network analysis. EFMs are characteristic (support-minimal) vectors of the flux cone that contains all feasible steady-state flux vectors of a given metabolic network. EFMs account for (homogeneous) linear constraints arising from reaction irreversibilities and the assumption of steady state; however, other (inhomogeneous) linear constraints, such as minimal and maximal reaction rates frequently used by other constraint-based techniques (such as flux balance analysis [FBA]), cannot be directly integrated. These additional constraints further restrict the space of feasible flux vectors and turn the flux cone into a general flux polyhedron in which the concept of EFMs is not directly applicable anymore. For this reason, there has been a conceptual gap between EFM-based (pathway) analysis methods and linear optimization (FBA) techniques, as they operate on different geometric objects. One approach to overcome these limitations was proposed ten years ago and is based on the concept of elementary flux vectors (EFVs). Only recently has the community started to recognize the potential of EFVs for metabolic network analysis. In fact, EFVs exactly represent the conceptual development required to generalize the idea of EFMs from flux cones to flux polyhedra. This work aims to present a concise theoretical and practical introduction to EFVs that is accessible to a broad audience. We highlight the close relationship between EFMs and EFVs and demonstrate that almost all applications of EFMs (in flux cones) are possible for EFVs (in flux polyhedra) as well. In fact, certain properties can only be studied with EFVs. Thus, we conclude that EFVs provide a powerful and unifying framework for constraint-based modeling of metabolic networks. PMID:28406903

Reconstruction of abstract quantum theory

International Nuclear Information System (INIS)

Drieschner, M.; Goernitz, T.; von Weizsaecker, C.F.

1988-01-01

Understanding quantum theory as a general theory of prediction, we reconstruct abstract quantum theory. Abstract means the general frame of quantum theory, without reference to a three-dimensional position space, to concepts like particle or field, or to special laws of dynamics. Reconstruction is the attempt to do this by formulating simple and plausible postulates on prediction in order to derive the basic concepts of quantum theory from them. Thereby no law of classical physics is presupposed which would then have to be quantized. We briefly discuss the relationship of theory and interpretation in physics and the fundamental role of time as a basic concept for physics. Then a number of assertions are given, formulated as succinctly as possible in order to make them easily quotable and comparable. The assertations are arranged in four groups: heuristic principles, verbal definitions of some terms, three basic postulates, and consequences. The three postulates of separable alternatives, indeterminism, and kinematics are the central points of this work. These brief assertions are commented upon, and their relationship with the interpretation of quantum theory is discussed. Also given are an outlook on the further development into concrete quantum theory and some philosophical reflections

An algorithm for the reconstruction of high-energy neutrino-induced particle showers and its application to the ANTARES neutrino telescope

International Nuclear Information System (INIS)

Albert, A.; Drouhin, D.; Racca, C.; Andre, M.; Anghinolfi, M.; Anton, G.; Folger, F.; Graf, K.; Hallmann, S.; Hoessl, J.; Hofestaedt, J.; James, C.W.; Kalekin, O.; Katz, U.; Kiessling, D.; Lahmann, R.; Sieger, C.; Ardid, M.; Felis, I.; Martinez-Mora, J.A.; Saldana, M.; Aubert, J.J.; Bertin, V.; Brunner, J.; Busto, J.; Carr, J.; Costantini, H.; Coyle, P.; Dornic, D.; Enzenhoefer, A.; Quinn, L.; Salvadori, I.; Turpin, D.; Avgitas, T.; Baret, B.; Bourret, S.; Coelho, J.A.B.; Creusot, A.; Galata, S.; Gregoire, T.; Gracia Ruiz, R.; Lachaud, C.; Barrios-Marti, J.; Hernandez-Rey, J.J.; Illuminati, G.; Lotze, M.; Toennis, C.; Zornoza, J.D.; Zuniga, J.; Basa, S.; Marcelin, M.; Nezri, E.; Biagi, S.; Coniglione, R.; Distefano, C.; Piattelli, P.; Riccobene, G.; Sapienza, P.; Trovato, A.; Bormuth, R.; Jong, M. de; Samtleben, D.F.E.; Bouwhuis, M.C.; Heijboer, A.J.; Jongen, M.; Michael, T.; Bruijn, R.; Melis, K.; Capone, A.; De Bonis, G.; Di Palma, I.; Perrina, C.; Vizzoca, A.; Caramete, L.; Pavalas, G.E.; Popa, V.; Celli, S.; Chiarusi, T.; Circella, M.; Sanchez-Losa, A.; Coleiro, A.; Deschamps, A.; Hello, Y.; Domi, A.; Hugon, C.; Sanguineti, M.; Taiuti, M.; Donzaud, C.; Eberl, T.; El Bojaddaini, I.; Moussa, A.; Elsaesser, D.; Kadler, M.; Kreter, M.; Fusco, L.A.; Margiotta, A.; Pellegrino, C.; Spurio, M.; Versari, F.; Gay, P.; Giordano, V.; Glotin, H.; Haren, H. van; Kouchner, A.; Van Elewyck, V.; Kreykenbohm, I.; Wilms, J.; Kulikovskiy, V.; Lefevre, D.; Leonora, E.; Loucatos, S.; Vallage, B.; Marinelli, A.; Mele, R.; Vivolo, D.; Migliozzi, P.; Organokov, M.; Pradier, T.; Schuessler, F.; Stolarczyk, T.; Tayalati, Y.

2017-01-01

A novel algorithm to reconstruct neutrino-induced particle showers within the ANTARES neutrino telescope is presented. The method achieves a median angular resolution of 6 "c"i"r"c"l"e for shower energies below 100 TeV. Applying this algorithm to 6 years of data taken with the ANTARES detector, 8 events with reconstructed shower energies above 10 TeV are observed. This is consistent with the expectation of about 5 events from atmospheric backgrounds, but also compatible with diffuse astrophysical flux measurements by the IceCube collaboration, from which 2-4 additional events are expected. A 90% C.L. upper limit on the diffuse astrophysical neutrino flux with a value per neutrino flavour of E"2 . Φ"9"0"% = 4.9 . 10"-"8 GeV . cm"-"2 . s"-"1 . sr"-"1 is set, applicable to the energy range from 23 TeV to 7.8 PeV, assuming an unbroken E"-"2 spectrum and neutrino flavour equipartition at Earth. (orig.)

An algorithm for the reconstruction of high-energy neutrino-induced particle showers and its application to the ANTARES neutrino telescope

Energy Technology Data Exchange (ETDEWEB)

Albert, A.; Drouhin, D.; Racca, C. [GRPHE, Universite de Haute Alsace, Institut universitaire de technologie de Colmar, 34 rue du Grillenbreit, BP 50568, Colmar (France); Andre, M. [Technical University of Catalonia, Laboratory of Applied Bioacoustics, Rambla Exposicio, Barcelona (Spain); Anghinolfi, M. [INFN-Sezione di Genova, Genoa (Italy); Anton, G.; Folger, F.; Graf, K.; Hallmann, S.; Hoessl, J.; Hofestaedt, J.; James, C.W.; Kalekin, O.; Katz, U.; Kiessling, D.; Lahmann, R.; Sieger, C. [Friedrich-Alexander-Universitaet Erlangen-Nuernberg, Erlangen Centre for Astroparticle Physics, Erlangen (Germany); Ardid, M.; Felis, I.; Martinez-Mora, J.A.; Saldana, M. [Universitat Politecnica de Valencia, Institut d' Investigacio per a la Gestio Integrada de les Zones Costaneres (IGIC), Gandia (Spain); Aubert, J.J.; Bertin, V.; Brunner, J.; Busto, J.; Carr, J.; Costantini, H.; Coyle, P.; Dornic, D.; Enzenhoefer, A.; Quinn, L.; Salvadori, I.; Turpin, D. [Aix Marseille Univ, CNRS/IN2P3, CPPM, Marseille (France); Avgitas, T.; Baret, B.; Bourret, S.; Coelho, J.A.B.; Creusot, A.; Galata, S.; Gregoire, T.; Gracia Ruiz, R.; Lachaud, C. [APC, Univ Paris Diderot, CNRS/IN2P3, CEA/Irfu, Obs de Paris, Sorbonne Paris Cite, Paris (France); Barrios-Marti, J.; Hernandez-Rey, J.J.; Illuminati, G.; Lotze, M.; Toennis, C.; Zornoza, J.D.; Zuniga, J. [IFIC, Instituto de Fisica Corpuscular (CSIC-Universitat de Valencia) c/Catedratico Jose Beltran, 2, 46980, Paterna, Valencia (Spain); Basa, S.; Marcelin, M.; Nezri, E. [LAM, Laboratoire d' Astrophysique de Marseille, Pole de l' Etoile Site de Chateau-Gombert, Marseille Cedex 13 (France); Biagi, S.; Coniglione, R.; Distefano, C.; Piattelli, P.; Riccobene, G.; Sapienza, P.; Trovato, A. [INFN, Laboratori Nazionali del Sud (LNS), Catania (Italy); Bormuth, R.; Jong, M. de; Samtleben, D.F.E. [Nikhef, Amsterdam (Netherlands); Universiteit Leiden, Huygens-Kamerlingh Onnes Laboratorium, Leiden (Netherlands); Bouwhuis, M.C.; Heijboer, A.J.; Jongen, M.; Michael, T. [Nikhef, Amsterdam (Netherlands); Bruijn, R.; Melis, K. [Nikhef, Amsterdam (Netherlands); Universiteit van Amsterdam, Instituut voor Hoge-Energie Fysica, Amsterdam (Netherlands); Capone, A.; De Bonis, G.; Di Palma, I.; Perrina, C.; Vizzoca, A. [INFN, Sezione di Roma, Rome (Italy); Dipartimento di Fisica dell' Universita La Sapienza, Rome (Italy); Caramete, L.; Pavalas, G.E.; Popa, V. [Institute for Space Science, 077125, Bucharest, Magurele (Romania); Celli, S. [INFN, Sezione di Roma, Rome (Italy); Dipartimento di Fisica dell' Universita La Sapienza, Rome (Italy); Gran Sasso Science Institute, L' Aquila (Italy); Chiarusi, T. [INFN, Sezione di Bologna, Bologna (Italy); Circella, M.; Sanchez-Losa, A. [INFN, Sezione di Bari, Bari (Italy); Coleiro, A. [APC, Univ Paris Diderot, CNRS/IN2P3, CEA/Irfu, Obs de Paris, Sorbonne Paris Cite, Paris (France); IFIC, Instituto de Fisica Corpuscular (CSIC-Universitat de Valencia) c/Catedratico Jose Beltran, 2, 46980, Paterna, Valencia (Spain); Deschamps, A.; Hello, Y. [CNRS, IRD, Observatoire de la Cote d' Azur, Geoazur, UCA, Sophia Antipolis (France); Domi, A.; Hugon, C.; Sanguineti, M.; Taiuti, M. [INFN-Sezione di Genova, Genoa (Italy); Dipartimento di Fisica dell' Universita, Genoa (Italy); Donzaud, C. [APC, Univ Paris Diderot, CNRS/IN2P3, CEA/Irfu, Obs de Paris, Sorbonne Paris Cite, Paris (France); Universite Paris-Sud, Orsay Cedex (France); Eberl, T. [Friedrich-Alexander-Universitaet Erlangen-Nuernberg, Erlangen Centre for Astroparticle Physics, Erlangen (Germany); El Bojaddaini, I.; Moussa, A. [University Mohammed I, Laboratory of Physics of Matter and Radiations, B.P.717, Oujda (Morocco); Elsaesser, D.; Kadler, M.; Kreter, M. [Universitaet Wuerzburg, Institut fuer Theoretische Physik und Astrophysik, Wuerzburg (Germany); Fusco, L.A.; Margiotta, A.; Pellegrino, C.; Spurio, M.; Versari, F. [INFN, Sezione di Bologna, Bologna (Italy); Dipartimento di Fisica e Astronomia dell' Universita, Bologna (Italy); Gay, P. [APC, Univ Paris Diderot, CNRS/IN2P3, CEA/Irfu, Obs de Paris, Sorbonne Paris Cite, Paris (France); Universite Blaise Pascal, CNRS/IN2P3, Laboratoire de Physique Corpusculaire, Clermont Universite, BP 10448, Clermont-Ferrand (France); Giordano, V. [INFN, Sezione di Catania, Catania (Italy); Glotin, H. [LSIS, Aix Marseille Universite CNRS ENSAM LSIS UMR 7296, Marseille (France); Universite de Toulon CNRS LSIS UMR 7296, La Garde (France); Institut Universitaire de France, Paris (France); Haren, H. van [Royal Netherlands Institute for Sea Research (NIOZ), ' t Horntje (Texel) (Netherlands); Kouchner, A.; Van Elewyck, V. [APC, Univ Paris Diderot, CNRS/IN2P3, CEA/Irfu, Obs de Paris, Sorbonne Paris Cite (France); Institut Universitaire de France, Paris (France); Kreykenbohm, I.; Wilms, J. [Universitaet Erlangen-Nuernberg, Dr. Remeis-Sternwarte and ECAP, Bamberg (Germany); Kulikovskiy, V. [Aix Marseille Univ, CNRS/IN2P3, CPPM, Marseille (France); Skobeltsyn Institute of Nuclear Physics, Moscow State University, Moscow (RU); Lefevre, D. [Aix-Marseille University, Mediterranean Institute of Oceanography (MIO), Marseille Cedex 9 (FR); Universite du Sud Toulon-Var, CNRS-INSU/IRD UM 110, La Garde Cedex (FR); Leonora, E. [INFN, Sezione di Catania, Catania (IT); Dipartimento di Fisica ed Astronomia dell' Universita, Catania (IT); Loucatos, S.; Vallage, B. [APC, Univ Paris Diderot, CNRS/IN2P3, CEA/Irfu, Obs de Paris, Sorbonne Paris Cite, Paris (FR); Direction des Sciences de la Matiere, Institut de Recherche sur les Lois Fondamentales de l' Univers, Service de Physique des Particules, CEA Saclay, Gif-sur-Yvette (FR); Marinelli, A. [INFN, Sezione di Pisa, Pisa (IT); Dipartimento di Fisica dell' Universita, Pisa (IT); Mele, R.; Vivolo, D. [INFN, Sezione di Napoli, Naples (IT); Dipartimento di Fisica dell' Universita Federico II di Napoli, Naples (IT); Migliozzi, P. [INFN, Sezione di Napoli, Naples (IT); Organokov, M.; Pradier, T. [Universite de Strasbourg, CNRS, IPHC UMR 7178, Strasbourg (FR); Schuessler, F.; Stolarczyk, T. [Direction des Sciences de la Matiere, Institut de Recherche sur les Lois Fondamentales de l' Univers, Service de Physique des Particules, CEA Saclay, Gif-sur-Yvette (FR); Tayalati, Y. [University Mohammed V in Rabat, Faculty of Sciences, Rabat (MA)

2017-06-15

A novel algorithm to reconstruct neutrino-induced particle showers within the ANTARES neutrino telescope is presented. The method achieves a median angular resolution of 6 {sup circle} for shower energies below 100 TeV. Applying this algorithm to 6 years of data taken with the ANTARES detector, 8 events with reconstructed shower energies above 10 TeV are observed. This is consistent with the expectation of about 5 events from atmospheric backgrounds, but also compatible with diffuse astrophysical flux measurements by the IceCube collaboration, from which 2-4 additional events are expected. A 90% C.L. upper limit on the diffuse astrophysical neutrino flux with a value per neutrino flavour of E{sup 2} . Φ{sup 90%} = 4.9 . 10{sup -8} GeV . cm{sup -2} . s{sup -1} . sr{sup -1} is set, applicable to the energy range from 23 TeV to 7.8 PeV, assuming an unbroken E{sup -2} spectrum and neutrino flavour equipartition at Earth. (orig.)

A Method to Reconstruct the Solar-Induced Canopy Fluorescence Spectrum from Hyperspectral Measurements

Directory of Open Access Journals (Sweden)

Feng Zhao

2014-10-01

Full Text Available A method for canopy Fluorescence Spectrum Reconstruction (FSR is proposed in this study, which can be used to retrieve the solar-induced canopy fluorescence spectrum over the whole chlorophyll fluorescence emission region from 640–850 nm. Firstly, the radiance of the solar-induced chlorophyll fluorescence (Fs at five absorption lines of the solar spectrum was retrieved by a Spectral Fitting Method (SFM. The Singular Vector Decomposition (SVD technique was then used to extract three basis spectra from a training dataset simulated by the model SCOPE (Soil Canopy Observation, Photochemistry and Energy fluxes. Finally, these basis spectra were linearly combined to reconstruct the Fs spectrum, and the coefficients of them were determined by Weighted Linear Least Squares (WLLS fitting with the five retrieved Fs values. Results for simulated datasets indicate that the FSR method could accurately reconstruct the Fs spectra from hyperspectral measurements acquired by instruments of high Spectral Resolution (SR and Signal to Noise Ratio (SNR. The FSR method was also applied to an experimental dataset acquired in a diurnal experiment. The diurnal change of the reconstructed Fs spectra shows that the Fs radiance around noon was higher than that in the morning and afternoon, which is consistent with former studies. Finally, the potential and limitations of this method are discussed.

Outcomes in Anterior Cruciate Ligament Reconstruction Surgery

Directory of Open Access Journals (Sweden)

Roman Mihai

2016-11-01

Full Text Available Improving the outcomes in reconstructive surgery of the anterior cruciate ligament (ACL requires a rigorous and permanent assessment of specific parameters. Therefore, we can increase the degree of reproducibility of the procedure and identify particular aspects in order to achieve an adequate and individualized therapeutic approach for each case. In order to accomplish this goal, the use of complex means (scores of quantifying results is required. That includes objective means of verifying the parameters in knee surgery, and a subjective evaluation of the patient in order to compare the results.

Quantitative summer temperature reconstruction derived from a combined biogenic Si and chironomid record from varved sediments of Lake Silvaplana (south-eastern Swiss Alps) back to AD 1177

Science.gov (United States)

Trachsel, M.; Grosjean, M.; Larocque-Tobler, I.; Schwikowski, M.; Blass, A.; Sturm, M.

2010-09-01

High-resolution quantitative temperature records are needed for placing the recent warming into the context of long-term natural climate variability. In this study we present a quantitative high-resolution (9-year) summer (June-August) temperature reconstruction back to AD 1177 for the south-eastern Swiss Alps. This region is a good predictor for summer temperatures in large parts of western and central Europe. Our reconstruction is based on a combination of the high-frequency component of annually resolved biogenic silica (bSi flux) data and the low-frequency component of decadal chironomid-inferred temperatures from annually laminated well dated sediments (varves) from proglacial Lake Silvaplana, eastern Swiss Alps. For the calibration (period AD 1760-1949) we assess systematically the effects of six different regression methods (Type I regressions: Inverse Regression IR, Inverse Prediction IP, Generalised Least Squares GLS; Type II regressions: Major Axis MA, Ranged Major Axis RMA and Standard Major Axis SMA) with regard to the predicted amplitude and the calibration statistics such as root-mean-square error of prediction (RMSEP), reduction of error (RE) and coefficient of efficiency (CE). We found a trade-off in the regression model choice between a good representation of the amplitude and good calibration statistics. The band-pass filtered bSi flux record is in close agreement both in the structure and the amplitude with two fully independent reconstructions spanning back to AD 1500 and AD 1177, respectively. All known pulses of negative volcanic forcing are represented as cold anomalies in the bSi flux record. Volcanic pulses combined with low solar activity (Spörer and Maunder Minimum) are seen as particularly cold episodes around AD 1460 and AD 1690. The combined chironomid and bSi flux temperature record (RMSEP = 0.57 °C) is in good agreement with the glacier history of the Alps. The warmest (AD 1190) and coldest decades (17th century; 1680-1700) of our

Optimization of the reconstruction parameters in [123I]FP-CIT SPECT

Science.gov (United States)

Niñerola-Baizán, Aida; Gallego, Judith; Cot, Albert; Aguiar, Pablo; Lomeña, Francisco; Pavía, Javier; Ros, Domènec

2018-04-01

The aim of this work was to obtain a set of parameters to be applied in [123I]FP-CIT SPECT reconstruction in order to minimize the error between standardized and true values of the specific uptake ratio (SUR) in dopaminergic neurotransmission SPECT studies. To this end, Monte Carlo simulation was used to generate a database of 1380 projection data-sets from 23 subjects, including normal cases and a variety of pathologies. Studies were reconstructed using filtered back projection (FBP) with attenuation correction and ordered subset expectation maximization (OSEM) with correction for different degradations (attenuation, scatter and PSF). Reconstruction parameters to be optimized were the cut-off frequency of a 2D Butterworth pre-filter in FBP, and the number of iterations and the full width at Half maximum of a 3D Gaussian post-filter in OSEM. Reconstructed images were quantified using regions of interest (ROIs) derived from Magnetic Resonance scans and from the Automated Anatomical Labeling map. Results were standardized by applying a simple linear regression line obtained from the entire patient dataset. Our findings show that we can obtain a set of optimal parameters for each reconstruction strategy. The accuracy of the standardized SUR increases when the reconstruction method includes more corrections. The use of generic ROIs instead of subject-specific ROIs adds significant inaccuracies. Thus, after reconstruction with OSEM and correction for all degradations, subject-specific ROIs led to errors between standardized and true SUR values in the range [‑0.5, +0.5] in 87% and 92% of the cases for caudate and putamen, respectively. These percentages dropped to 75% and 88% when the generic ROIs were used.

New method for determining central axial orientation of flux rope embedded within current sheet using multipoint measurements

Science.gov (United States)

Li, ZhaoYu; Chen, Tao; Yan, GuangQing

2016-10-01

A new method for determining the central axial orientation of a two-dimensional coherent magnetic flux rope (MFR) via multipoint analysis of the magnetic-field structure is developed. The method is devised under the following geometrical assumptions: (1) on its cross section, the structure is left-right symmetric; (2) the projected structure velocity is vertical to the line of symmetry. The two conditions can be naturally satisfied for cylindrical MFRs and are expected to be satisfied for MFRs that are flattened within current sheets. The model test demonstrates that, for determining the axial orientation of such structures, the new method is more efficient and reliable than traditional techniques such as minimum-variance analysis of the magnetic field, Grad-Shafranov (GS) reconstruction, and the more recent method based on the cylindrically symmetric assumption. A total of five flux transfer events observed by Cluster are studied using the proposed approach, and the application results indicate that the observed structures, regardless of their actual physical properties, fit the assumed geometrical model well. For these events, the inferred axial orientations are all in excellent agreement with those obtained using the multi-GS reconstruction technique.

A Total Variation-Based Reconstruction Method for Dynamic MRI

Directory of Open Access Journals (Sweden)

Germana Landi

2008-01-01

Full Text Available In recent years, total variation (TV regularization has become a popular and powerful tool for image restoration and enhancement. In this work, we apply TV minimization to improve the quality of dynamic magnetic resonance images. Dynamic magnetic resonance imaging is an increasingly popular clinical technique used to monitor spatio-temporal changes in tissue structure. Fast data acquisition is necessary in order to capture the dynamic process. Most commonly, the requirement of high temporal resolution is fulfilled by sacrificing spatial resolution. Therefore, the numerical methods have to address the issue of images reconstruction from limited Fourier data. One of the most successful techniques for dynamic imaging applications is the reduced-encoded imaging by generalized-series reconstruction method of Liang and Lauterbur. However, even if this method utilizes a priori data for optimal image reconstruction, the produced dynamic images are degraded by truncation artifacts, most notably Gibbs ringing, due to the spatial low resolution of the data. We use a TV regularization strategy in order to reduce these truncation artifacts in the dynamic images. The resulting TV minimization problem is solved by the fixed point iteration method of Vogel and Oman. The results of test problems with simulated and real data are presented to illustrate the effectiveness of the proposed approach in reducing the truncation artifacts of the reconstructed images.

Half-integer flux quantum effect in cuprate superconductors - a probe of pairing symmetry

International Nuclear Information System (INIS)

Tsuei, C.C.; Kirtley, J.R.; Gupta, A.; Sun, J.Z.; Moler, K.A.; Wang, J.H.

1996-01-01

Based on macroscopic quantum coherence effects arising from pair tunneling and flux quantization, a series of tricrystal experiments have been designed and carried out to test the order parameter symmetry in high-T c cuprate superconductors. By using a scanning SQUID microscope, we have directly and non-invasively observed the spontaneously generated half-integer flux quantum effect in controlled-orientation tricrystal cuprate superconducting systems. The presence or absence of the half-integer flux quantum effect as a function of the tricrystal geometry allows us to prove that the order parameter symmetry in the YBCO and Tl2201 systems is consistent with that of the d x 2 -y 2 pair state. (orig.)

FluxVisualizer, a Software to Visualize Fluxes through Metabolic Networks

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Tim Daniel Rose

2018-04-01

Full Text Available FluxVisualizer (Version 1.0, 2017, freely available at https://fluxvisualizer.ibgc.cnrs.fr is a software to visualize fluxes values on a scalable vector graphic (SVG representation of a metabolic network by colouring or increasing the width of reaction arrows of the SVG file. FluxVisualizer does not aim to draw metabolic networks but to use a customer’s SVG file allowing him to exploit his representation standards with a minimum of constraints. FluxVisualizer is especially suitable for small to medium size metabolic networks, where a visual representation of the fluxes makes sense. The flux distribution can either be an elementary flux mode (EFM, a flux balance analysis (FBA result or any other flux distribution. It allows the automatic visualization of a series of pathways of the same network as is needed for a set of EFMs. The software is coded in python3 and provides a graphical user interface (GUI and an application programming interface (API. All functionalities of the program can be used from the API and the GUI and allows advanced users to add their own functionalities. The software is able to work with various formats of flux distributions (Metatool, CellNetAnalyzer, COPASI and FAME export files as well as with Excel files. This simple software can save a lot of time when evaluating fluxes simulations on a metabolic network.

Suppression of intensity transition artifacts in statistical x-ray computer tomography reconstruction through Radon inversion initialization

International Nuclear Information System (INIS)

Zbijewski, Wojciech; Beekman, Freek J.

2004-01-01

Statistical reconstruction (SR) methods provide a general and flexible framework for obtaining tomographic images from projections. For several applications SR has been shown to outperform analytical algorithms in terms of resolution-noise trade-off achieved in the reconstructions. A disadvantage of SR is the long computational time required to obtain the reconstructions, in particular when large data sets characteristic for x-ray computer tomography (CT) are involved. As was shown recently, by combining statistical methods with block iterative acceleration schemes [e.g., like in the ordered subsets convex (OSC) algorithm], the reconstruction time for x-ray CT applications can be reduced by about two orders of magnitude. There are, however, some factors lengthening the reconstruction process that hamper both accelerated and standard statistical algorithms to similar degree. In this simulation study based on monoenergetic and scatter-free projection data, we demonstrate that one of these factors is the extremely high number of iterations needed to remove artifacts that can appear around high-contrast structures. We also show (using the OSC method) that these artifacts can be adequately suppressed if statistical reconstruction is initialized with images generated by means of Radon inversion algorithms like filtered back projection (FBP). This allows the reconstruction time to be shortened by even as much as one order of magnitude. Although the initialization of the statistical algorithm with FBP image introduces some additional noise into the first iteration of OSC reconstruction, the resolution-noise trade-off and the contrast-to-noise ratio of final images are not markedly compromised

Blind compressed sensing image reconstruction based on alternating direction method

Science.gov (United States)

Liu, Qinan; Guo, Shuxu

2018-04-01

In order to solve the problem of how to reconstruct the original image under the condition of unknown sparse basis, this paper proposes an image reconstruction method based on blind compressed sensing model. In this model, the image signal is regarded as the product of a sparse coefficient matrix and a dictionary matrix. Based on the existing blind compressed sensing theory, the optimal solution is solved by the alternative minimization method. The proposed method solves the problem that the sparse basis in compressed sensing is difficult to represent, which restrains the noise and improves the quality of reconstructed image. This method ensures that the blind compressed sensing theory has a unique solution and can recover the reconstructed original image signal from a complex environment with a stronger self-adaptability. The experimental results show that the image reconstruction algorithm based on blind compressed sensing proposed in this paper can recover high quality image signals under the condition of under-sampling.

Field experiment on 222Rn flux from reclaimed uranium tailings

International Nuclear Information System (INIS)

Hinton, T.G.

1983-01-01

Design and construction techniques are described for a 1.6 ha experimental uranium mill tailings reclamation plot. A passive, activated charcoal device was developed and tested for measurements of radon flux. Experiments on radon flux versus overburden depth showed that tailings covered with 1.5 m of revegetated or 0.3 m of bare overburden had exhalation rates comparable to background. Vegetated subplots exhibited a significantly higher (often an order of magnitude) flux than the bare subplots. Results on the variation of flux over time did not reveal any definitive patterns, possibly due to the high variability among replicates. A positive correlation was demonstrated between precipitation and radon flux. This is discussed in detail and possibly explained by the increase in water content of the micropores within the tailings, which increases the emanation coefficient without adversely effecting the diffusion coefficient of the overburden. 30 references, 7 figures, 3 tables

CARBO-CONTROLE. Quantification of the carbon flux and stocks at the european and national scale; CARBO-CONTROLE. Quantification des flux et stocks de carbone au niveau Europeen et national

Energy Technology Data Exchange (ETDEWEB)

Ciais, P

2007-07-01

The CARBO-CONTROLE project aims to evaluate the different methodologies to estimate the CO{sub 2} flux at the european, national and regional scale. The strategy is to combine a crumbling, down scaling, of the flux at a big scale, by inverting the atmospheric CO{sub 2} measures with a aggregation, up scaling, of the national stocks and flux from the climatic parameters of a model of ecosystems.They show that with the monthly data of the global network of CO{sub 2} monitoring stations, it is possible to obtain an estimation of the european flux. Meanwhile the errors bond to the leak of continental stations are of the order of the flux average. (A.L.B.)

An ART iterative reconstruction algorithm for computed tomography of diffraction enhanced imaging

International Nuclear Information System (INIS)

Wang Zhentian; Zhang Li; Huang Zhifeng; Kang Kejun; Chen Zhiqiang; Fang Qiaoguang; Zhu Peiping

2009-01-01

X-ray diffraction enhanced imaging (DEI) has extremely high sensitivity for weakly absorbing low-Z samples in medical and biological fields. In this paper, we propose an Algebra Reconstruction Technique (ART) iterative reconstruction algorithm for computed tomography of diffraction enhanced imaging (DEI-CT). An Ordered Subsets (OS) technique is used to accelerate the ART reconstruction. Few-view reconstruction is also studied, and a partial differential equation (PDE) type filter which has the ability of edge-preserving and denoising is used to improve the image quality and eliminate the artifacts. The proposed algorithm is validated with both the numerical simulations and the experiment at the Beijing synchrotron radiation facility (BSRF). (authors)

Noniterative MAP reconstruction using sparse matrix representations.

Science.gov (United States)

Cao, Guangzhi; Bouman, Charles A; Webb, Kevin J

2009-09-01

We present a method for noniterative maximum a posteriori (MAP) tomographic reconstruction which is based on the use of sparse matrix representations. Our approach is to precompute and store the inverse matrix required for MAP reconstruction. This approach has generally not been used in the past because the inverse matrix is typically large and fully populated (i.e., not sparse). In order to overcome this problem, we introduce two new ideas. The first idea is a novel theory for the lossy source coding of matrix transformations which we refer to as matrix source coding. This theory is based on a distortion metric that reflects the distortions produced in the final matrix-vector product, rather than the distortions in the coded matrix itself. The resulting algorithms are shown to require orthonormal transformations of both the measurement data and the matrix rows and columns before quantization and coding. The second idea is a method for efficiently storing and computing the required orthonormal transformations, which we call a sparse-matrix transform (SMT). The SMT is a generalization of the classical FFT in that it uses butterflies to compute an orthonormal transform; but unlike an FFT, the SMT uses the butterflies in an irregular pattern, and is numerically designed to best approximate the desired transforms. We demonstrate the potential of the noniterative MAP reconstruction with examples from optical tomography. The method requires offline computation to encode the inverse transform. However, once these offline computations are completed, the noniterative MAP algorithm is shown to reduce both storage and computation by well over two orders of magnitude, as compared to a linear iterative reconstruction methods.

Continuous analog of multiplicative algebraic reconstruction technique for computed tomography

Science.gov (United States)

Tateishi, Kiyoko; Yamaguchi, Yusaku; Abou Al-Ola, Omar M.; Kojima, Takeshi; Yoshinaga, Tetsuya

2016-03-01

We propose a hybrid dynamical system as a continuous analog to the block-iterative multiplicative algebraic reconstruction technique (BI-MART), which is a well-known iterative image reconstruction algorithm for computed tomography. The hybrid system is described by a switched nonlinear system with a piecewise smooth vector field or differential equation and, for consistent inverse problems, the convergence of non-negatively constrained solutions to a globally stable equilibrium is guaranteed by the Lyapunov theorem. Namely, we can prove theoretically that a weighted Kullback-Leibler divergence measure can be a common Lyapunov function for the switched system. We show that discretizing the differential equation by using the first-order approximation (Euler's method) based on the geometric multiplicative calculus leads to the same iterative formula of the BI-MART with the scaling parameter as a time-step of numerical discretization. The present paper is the first to reveal that a kind of iterative image reconstruction algorithm is constructed by the discretization of a continuous-time dynamical system for solving tomographic inverse problems. Iterative algorithms with not only the Euler method but also the Runge-Kutta methods of lower-orders applied for discretizing the continuous-time system can be used for image reconstruction. A numerical example showing the characteristics of the discretized iterative methods is presented.

Fast algorithm of track reconstruction for the Delphy TPC

International Nuclear Information System (INIS)

Maillard, J.

1984-01-01

We describe a simple geometrical method (polar inversion) to reconstruct tracks. When the magnetic field is constant in magnitude and direction. This method uses geometrical properties of the trajectories. In the case of the DELPHI apparatus, the track reconstruction is done using TPC informations. After explaining the algorithm, we give results on ''GEANT'' simulated events using the ''Lund'' generator. Today we get a computer time of the order of 1.2 milliseconds on a CDC 7600 and an efficiency of 98% [fr

Flux-corrected transport principles, algorithms, and applications

CERN Document Server

Löhner, Rainald; Turek, Stefan

2012-01-01

Many modern high-resolution schemes for Computational Fluid Dynamics trace their origins to the Flux-Corrected Transport (FCT) paradigm. FCT maintains monotonicity using a nonoscillatory low-order scheme to determine the bounds for a constrained high-order approximation. This book begins with historical notes by J.P. Boris and D.L. Book who invented FCT in the early 1970s. The chapters that follow describe the design of fully multidimensional FCT algorithms for structured and unstructured grids, limiting for systems of conservation laws, and the use of FCT as an implicit subgrid scale model. The second edition presents 200 pages of additional material. The main highlights of the three new chapters include: FCT-constrained interpolation for Arbitrary Lagrangian-Eulerian methods, an optimization-based approach to flux correction, and FCT simulations of high-speed flows on overset grids. Addressing students and researchers, as well as CFD practitioners, the book is focused on computational aspects and contains m...

A Support-Based Reconstruction for SENSE MRI

Directory of Open Access Journals (Sweden)

Bradley S. Peterson

2013-03-01

Full Text Available A novel, rapid algorithm to speed up and improve the reconstruction of sensitivity encoding (SENSE MRI was proposed in this paper. The essence of the algorithm was that it iteratively solved the model of simple SENSE on a pixel-by-pixel basis in the region of support (ROS. The ROS was obtained from scout images of eight channels by morphological operations such as opening and filling. All the pixels in the FOV were paired and classified into four types, according to their spatial locations with respect to the ROS, and each with corresponding procedures of solving the inverse problem for image reconstruction. The sensitivity maps, used for the image reconstruction and covering only the ROS, were obtained by a polynomial regression model without extrapolation to keep the estimation errors small. The experiments demonstrate that the proposed method improves the reconstruction of SENSE in terms of speed and accuracy. The mean square errors (MSE of our reconstruction is reduced by 16.05% for a 2D brain MR image and the mean MSE over the whole slices in a 3D brain MRI is reduced by 30.44% compared to those of the traditional methods. The computation time is only 25%, 45%, and 70% of the traditional method for images with numbers of pixels in the orders of 103, 104, and 105–107, respectively.

Development of a three-dimensional computer code for reconstructing power distributions by means of side reflector instrumentation and determination of the capabilities and limitations of this method

International Nuclear Information System (INIS)

Knob, P.J.

1982-07-01

This work is concerned with the detection of flux disturbances in pebble bed high temperature reactors by means of flux measurements in the side reflector. Included among the disturbances studied are xenon oscillations, rod group insertions, and individual rod insertions. Using the three-dimensional diffusion code CITATION, core calculations for both a very small reactor (KAHTER) and a large reactor (PNP-3000) were carried out to determine the neutron fluxes at the detector positions. These flux values were then used in flux mapping codes for reconstructing the flux distribution in the core. As an extension of the already existing two-dimensional MOFA code, which maps azimuthal disturbances, a new three-dimensional flux mapping code ZELT was developed for handling axial disturbances as well. It was found that both flux mapping programs give satisfactory results for small and large pebble bed reactors alike. (orig.) [de

Reconstruction actions in order to achieve and increase the designed nominal heat capacity of a hot-water block boiler with two flame pipes

International Nuclear Information System (INIS)

Ninevski, Gjorgji; Sekovanikj, Ivica; Kirovski, Hristo

2000-01-01

All companies which are occupied with some kind of useful energy production, must realize two very important things: firstly, maximum utilization of projecting capacities of energetic plants, in condition when specific investment for projecting and erecting of new plants allude use of prominent financial capital, and secondly, the energy must be produced economically, i.e. with the highest possible coefficient of efficiency and the lowest impact of combustion process to the environment. This paper presents the chronology of reconstruction activities of a block hot water boiler with two flame tubes type BKG 200 with 16.28 MWth (made by TPK Zagreb) in order to acquire and increase its thermal capacity app. 11 % (Authors)

Pollen-based biome reconstruction for southern Europe and Africa 18,000 yr BP

NARCIS (Netherlands)

Elenga, H; Peyron, O; Bonnefille, R; Jolly, D; Cheddadi, R; Guiot, J; Andrieu, [No Value; Bottema, S; Buchet, G; de Beaulieu, JL; Hamilton, AC; Maley, J; Marchant, R; Perez-Obiol, R; Reille, M; Riollet, G; Scott, L; Straka, H; Taylor, D; Van Campo, E; Vincens, A; Laarif, F; Jonson, H

Pollen data from 18,000 C-14 yr sp were compiled in order to reconstruct biome distributions at the last glacial maximum in southern Europe and Africa. Biome reconstructions were made using the objective biomization method applied to pollen counts using a complete list of dryland taxa wherever

Non-stationary reconstruction for dynamic fluorescence molecular tomography with extended kalman filter.

Science.gov (United States)

Liu, Xin; Wang, Hongkai; Yan, Zhuangzhi

2016-11-01

Dynamic fluorescence molecular tomography (FMT) plays an important role in drug delivery research. However, the majority of current reconstruction methods focus on solving the stationary FMT problems. If the stationary reconstruction methods are applied to the time-varying fluorescence measurements, the reconstructed results may suffer from a high level of artifacts. In addition, based on the stationary methods, only one tomographic image can be obtained after scanning one circle projection data. As a result, the movement of fluorophore in imaged object may not be detected due to the relative long data acquisition time (typically >1 min). In this paper, we apply extended kalman filter (EKF) technique to solve the non-stationary fluorescence tomography problem. Especially, to improve the EKF reconstruction performance, the generalized inverse of kalman gain is calculated by a second-order iterative method. The numerical simulation, phantom, and in vivo experiments are performed to evaluate the performance of the method. The experimental results indicate that by using the proposed EKF-based second-order iterative (EKF-SOI) method, we cannot only clearly resolve the time-varying distributions of fluorophore within imaged object, but also greatly improve the reconstruction time resolution (~2.5 sec/frame) which makes it possible to detect the movement of fluorophore during the imaging processes.

On an image reconstruction method for ECT

Science.gov (United States)

Sasamoto, Akira; Suzuki, Takayuki; Nishimura, Yoshihiro

2007-04-01

An image by Eddy Current Testing(ECT) is a blurred image to original flaw shape. In order to reconstruct fine flaw image, a new image reconstruction method has been proposed. This method is based on an assumption that a very simple relationship between measured data and source were described by a convolution of response function and flaw shape. This assumption leads to a simple inverse analysis method with deconvolution.In this method, Point Spread Function (PSF) and Line Spread Function(LSF) play a key role in deconvolution processing. This study proposes a simple data processing to determine PSF and LSF from ECT data of machined hole and line flaw. In order to verify its validity, ECT data for SUS316 plate(200x200x10mm) with artificial machined hole and notch flaw had been acquired by differential coil type sensors(produced by ZETEC Inc). Those data were analyzed by the proposed method. The proposed method restored sharp discrete multiple hole image from interfered data by multiple holes. Also the estimated width of line flaw has been much improved compared with original experimental data. Although proposed inverse analysis strategy is simple and easy to implement, its validity to holes and line flaw have been shown by many results that much finer image than original image have been reconstructed.

On-Ground Attitude and Torque Reconstruction tor the Gaia Mission

OpenAIRE

Samaan, Malak; Theil, Stephan

2008-01-01

The work presented in this paper concerns the accurate On-Ground Attitude (OGA) reconstruction for the astrometry spacecraft Gaia in the presence of disturbance and control torques acting on the spacecraft. The reconstruction of the expected environmental torques which influence the spacecraft dynamics will be also investigated. The telemetry data from the spacecraft will include the on-board real time attitude which is of order of several arcsec. This raw attitude is the starting point...

Image interface in Java for tomographic reconstruction in nuclear medicine

International Nuclear Information System (INIS)

Andrade, M.A.; Silva, A.M. Marques da

2004-01-01

The aim of this study is to implement a software for tomographic reconstruction of SPECT data from Nuclear Medicine with a flexible interface design, cross-platform, written in Java. Validation tests were performed based on SPECT simulated data. The results showed that the implemented algorithms and filters agree with the theoretical context. We intend to extend the system by implementing additional tomographic reconstruction techniques and Java threads, in order to provide simultaneously image processing. (author)

Application of kinetic flux vector splitting scheme for solving multi-dimensional hydrodynamical models of semiconductor devices

Science.gov (United States)

Nisar, Ubaid Ahmed; Ashraf, Waqas; Qamar, Shamsul

In this article, one and two-dimensional hydrodynamical models of semiconductor devices are numerically investigated. The models treat the propagation of electrons in a semiconductor device as the flow of a charged compressible fluid. It plays an important role in predicting the behavior of electron flow in semiconductor devices. Mathematically, the governing equations form a convection-diffusion type system with a right hand side describing the relaxation effects and interaction with a self consistent electric field. The proposed numerical scheme is a splitting scheme based on the kinetic flux-vector splitting (KFVS) method for the hyperbolic step, and a semi-implicit Runge-Kutta method for the relaxation step. The KFVS method is based on the direct splitting of macroscopic flux functions of the system on the cell interfaces. The second order accuracy of the scheme is achieved by using MUSCL-type initial reconstruction and Runge-Kutta time stepping method. Several case studies are considered. For validation, the results of current scheme are compared with those obtained from the splitting scheme based on the NT central scheme. The effects of various parameters such as low field mobility, device length, lattice temperature and voltage are analyzed. The accuracy, efficiency and simplicity of the proposed KFVS scheme validates its generic applicability to the given model equations. A two dimensional simulation is also performed by KFVS method for a MESFET device, producing results in good agreement with those obtained by NT-central scheme.

Fitting and Reconstruction of Thirteen Simple Coronal Mass Ejections

Science.gov (United States)

Al-Haddad, Nada; Nieves-Chinchilla, Teresa; Savani, Neel P.; Lugaz, Noé; Roussev, Ilia I.

2018-05-01

Coronal mass ejections (CMEs) are the main drivers of geomagnetic disturbances, but the effects of their interaction with Earth's magnetic field depend on their magnetic configuration and orientation. Fitting and reconstruction techniques have been developed to determine important geometrical and physical CME properties, such as the orientation of the CME axis, the CME size, and its magnetic flux. In many instances, there is disagreement between different methods but also between fitting from in situ measurements and reconstruction based on remote imaging. This could be due to the geometrical or physical assumptions of the models, but also to the fact that the magnetic field inside CMEs is only measured at one point in space as the CME passes over a spacecraft. In this article we compare three methods that are based on different assumptions for measurements by the Wind spacecraft for 13 CMEs from 1997 to 2015. These CMEs are selected from the interplanetary coronal mass ejections catalog on https://wind.nasa.gov/ICMEindex.php https://wind.nasa.gov/ICMEindex.php" TargetType="URL"/> because of their simplicity in terms of: 1) slow expansion speed throughout the CME and 2) weak asymmetry in the magnetic field profile. This makes these 13 events ideal candidates for comparing codes that do not include expansion or distortion. We find that for these simple events, the codes are in relatively good agreement in terms of the CME axis orientation for six of the 13 events. Using the Grad-Shafranov technique, we can determine the shape of the cross-section, which is assumed to be circular for the other two models, a force-free fitting and a circular-cylindrical non force-free fitting. Five of the events are found to have a clear circular cross-section, even when this is not a precondition of the reconstruction. We make an initial attempt at evaluating the adequacy of the different assumptions for these simple CMEs. The conclusion of this work strongly suggests that attempts

MREIT experiments with 200 µA injected currents: a feasibility study using two reconstruction algorithms, SMM and harmonic BZ

International Nuclear Information System (INIS)

Arpinar, V E; Muftuler, L T; Hamamura, M J; Degirmenci, E

2012-01-01

Magnetic resonance electrical impedance tomography (MREIT) is a technique that produces images of conductivity in tissues and phantoms. In this technique, electrical currents are applied to an object and the resulting magnetic flux density is measured using magnetic resonance imaging (MRI) and the conductivity distribution is reconstructed using these MRI data. Currently, the technique is used in research environments, primarily studying phantoms and animals. In order to translate MREIT to clinical applications, strict safety standards need to be established, especially for safe current limits. However, there are currently no standards for safe current limits specific to MREIT. Until such standards are established, human MREIT applications need to conform to existing electrical safety standards in medical instrumentation, such as IEC601. This protocol limits patient auxiliary currents to 100 µA for low frequencies. However, published MREIT studies have utilized currents 10–400 times larger than this limit, bringing into question whether the clinical applications of MREIT are attainable under current standards. In this study, we investigated the feasibility of MREIT to accurately reconstruct the relative conductivity of a simple agarose phantom using 200 µA total injected current and tested the performance of two MREIT reconstruction algorithms. These reconstruction algorithms used are the iterative sensitivity matrix method (SMM) by Ider and Birgul (1998 Elektrik 6 215–25) with Tikhonov regularization and the harmonic B Z proposed by Oh et al (2003 Magn. Reason. Med. 50 875–8). The reconstruction techniques were tested at both 200 µA and 5 mA injected currents to investigate their noise sensitivity at low and high current conditions. It should be noted that 200 µA total injected current into a cylindrical phantom generates only 14.7 µA current in imaging slice. Similarly, 5 mA total injected current results in 367 µA in imaging slice. Total acquisition

Hybrid High-Order methods for finite deformations of hyperelastic materials

Science.gov (United States)

Abbas, Mickaël; Ern, Alexandre; Pignet, Nicolas

2018-01-01

We devise and evaluate numerically Hybrid High-Order (HHO) methods for hyperelastic materials undergoing finite deformations. The HHO methods use as discrete unknowns piecewise polynomials of order k≥1 on the mesh skeleton, together with cell-based polynomials that can be eliminated locally by static condensation. The discrete problem is written as the minimization of a broken nonlinear elastic energy where a local reconstruction of the displacement gradient is used. Two HHO methods are considered: a stabilized method where the gradient is reconstructed as a tensor-valued polynomial of order k and a stabilization is added to the discrete energy functional, and an unstabilized method which reconstructs a stable higher-order gradient and circumvents the need for stabilization. Both methods satisfy the principle of virtual work locally with equilibrated tractions. We present a numerical study of the two HHO methods on test cases with known solution and on more challenging three-dimensional test cases including finite deformations with strong shear layers and cavitating voids. We assess the computational efficiency of both methods, and we compare our results to those obtained with an industrial software using conforming finite elements and to results from the literature. The two HHO methods exhibit robust behavior in the quasi-incompressible regime.

Algebraic reconstruction techniques for spectral reconstruction in diffuse optical tomography

International Nuclear Information System (INIS)

Brendel, Bernhard; Ziegler, Ronny; Nielsen, Tim

2008-01-01

Reconstruction in diffuse optical tomography (DOT) necessitates solving the diffusion equation, which is nonlinear with respect to the parameters that have to be reconstructed. Currently applied solving methods are based on the linearization of the equation. For spectral three-dimensional reconstruction, the emerging equation system is too large for direct inversion, but the application of iterative methods is feasible. Computational effort and speed of convergence of these iterative methods are crucial since they determine the computation time of the reconstruction. In this paper, the iterative methods algebraic reconstruction technique (ART) and conjugated gradients (CGs) as well as a new modified ART method are investigated for spectral DOT reconstruction. The aim of the modified ART scheme is to speed up the convergence by considering the specific conditions of spectral reconstruction. As a result, it converges much faster to favorable results than conventional ART and CG methods

Atmospheric muons reconstruction with Antares

International Nuclear Information System (INIS)

Melissas, M.

2007-09-01

The ANTARES collaboration is building a neutrino telescope in the Mediterranean Sea. This detector contains 900 photomultiplier tubes, dispatched on 12 lines, in order to detect Cerenkov light from muon induced by neutrino interactions in the the vicinity of the detector. Currently the first 5 lines have been deployed. A first task consists in studying the stability of the detector calibration, which is a necessary step to understand the detector response. Then we studied optical properties of water, for this we developed a reconstruction method dedicated to LED Beacon. The extracted parameters are compatible with earlier measurements. A quality criteria to reject badly reconstructed track has been developed based on the likelihood of the tracks fit versus point fit. This has been applied to real data and a preliminary analysis of atmospheric muons with a 5-lines detector is performed. (author)

Superconducting flux flow digital circuits

International Nuclear Information System (INIS)

Martens, J.S.; Zipperian, T.E.; Hietala, V.M.; Ginley, D.S.; Tigges, C.P.; Phillips, J.M.; Siegal, M.P.

1993-01-01

The authors have developed a family of digital logic circuits based on superconducting flux flow transistors that show high speed, reasonable signal levels, large fan-out, and large noise margins. The circuits are made from high-temperature superconductors (HTS) and have been shown to operate at over 90 K. NOR gates have been demonstrated with fan-outs of more than 5 and fully loaded switching times less than a fixture-limited 50 ps. Ring-oscillator data suggest inverter delay times of about 40ps when using a 3-μm linewidths. Simple flip-flops have also been demonstrated showing large noise margins, response times of less than 30 ps, and static power dissipation on the order of 30 nW. Among other uses, this logic family is appropriate as an interface between logic families such as single flux quantum and conventional semiconductor logic

Space-Time Transformation in Flux-form Semi-Lagrangian Schemes

Directory of Open Access Journals (Sweden)

Peter C. Chu Chenwu Fan

2010-01-01

Full Text Available With a finite volume approach, a flux-form semi-Lagrangian (TFSL scheme with space-time transformation was developed to provide stable and accurate algorithm in solving the advection-diffusion equation. Different from the existing flux-form semi-Lagrangian schemes, the temporal integration of the flux from the present to the next time step is transformed into a spatial integration of the flux at the side of a grid cell (space for the present time step using the characteristic-line concept. The TFSL scheme not only keeps the good features of the semi-Lagrangian schemes (no Courant number limitation, but also has higher accuracy (of a second order in both time and space. The capability of the TFSL scheme is demonstrated by the simulation of the equatorial Rossby-soliton propagation. Computational stability and high accuracy makes this scheme useful in ocean modeling, computational fluid dynamics, and numerical weather prediction.

Heat transfer and critical heat flux in a spiral flow in an asymmetrical heated tube; Transfert thermique et flux critique dans un ecoulement helicoidal en tube chauffe asymetriquement

Energy Technology Data Exchange (ETDEWEB)

Boscary, J [CEA Centre d` Etudes de Cadarache, 13 - Saint-Paul-lez-Durance (France). Direction des Sciences de la Matiere; [Association Euratom-CEA, Centre d` Etudes Nucleaires de Cadarache, 13 - Saint-Paul-lez-Durance (France). Dept. de Recherches sur la Fusion Controlee

1997-03-01

The design of plasma facing components is crucial for plasma performance in next fusion reactors. These elements will be submitted to very high heat flux. They will be actively water-cooled by swirl tubes in the subcooled boiling regime. High heat flux experiments were conducted in order to analyse the heat transfer and to evaluate the critical heat flux. Water-cooled mock-ups were one-side heated by an electron beam gun for different thermal-hydraulic conditions. The critical heat flux was detected by an original method based on the isotherm modification on the heated surface. The wall heat transfer law including forced convection and subcooled boiling regimes was established. Numerical calculations of the material heat transfer conduction allowed the non-homogeneous distribution of the wall temperature and of the wall heat flux to be evaluated. The critical heat flux value was defined as the wall maximum heat flux. A critical heat flux model based on the liquid sublayer dryout under a vapor blanket was established. A good agreement with test results was found. (author) 197 refs.

Accuracy improvement of CT reconstruction using tree-structured filter bank

International Nuclear Information System (INIS)

Ueda, Kazuhiro; Morimoto, Hiroaki; Morikawa, Yoshitaka; Murakami, Junichi

2009-01-01

Accuracy improvement of 'CT reconstruction algorithm using TSFB (Tree-Structured Filter Bank)' that is high-speed CT reconstruction algorithm, was proposed. TSFB method could largely reduce the amount of computation in comparison with the CB (Convolution Backprojection) method, but it was the problem that an artifact occurred in a reconstruction image since reconstruction was performed with disregard to a signal out of the reconstruction domain in stage processing. Also the whole band filter being the component of a two-dimensional synthesis filter was IIR filter and then an artifact occurred at the end of the reconstruction image. In order to suppress these artifacts the proposed method enlarged the processing range by the TSFB method in the domain outside by the width control of the specimen line and line addition to the reconstruction domain outside. And, furthermore, to avoid increase of the amount of computation, the algorithm was proposed such as to decide the needed processing range depending on the number of steps processing with the TSFB and the degree of incline of filter, and then update the position and width of the specimen line to process the needed range. According to the simulation to realize a high-speed and highly accurate CT reconstruction in this way, the quality of the reconstruction image of the proposed method was improved in comparison with the TSFB method and got the same result with the CB method. (T. Tanaka)

Climatic reconstruction in Europe for 18,000 yr B.P. from pollen data

NARCIS (Netherlands)

Peyron, O; Guiot, J; Cheddadi, R; Tarasov, P; Reille, M; de Beaulieu, JL; Bottema, S; Andrieu, [No Value

An improved concept of the best analogs method is used to reconstruct the climate of the last glacial maximum from pollen data in Europe. In order to deal with the lack of perfect analogs of fossil assemblages and therefore to obtain a more accurate climate reconstruction, we used a combination of

Semi-analytic flux formulas for shielding calculations

International Nuclear Information System (INIS)

Wallace, O.J.

1976-06-01

A special coordinate system based on the work of H. Ono and A. Tsuro has been used to derive exact semi-analytic formulas for the flux from cylindrical, spherical, toroidal, rectangular, annular and truncated cone volume sources; from cylindrical, spherical, truncated cone, disk and rectangular surface sources; and from curved and tilted line sources. In most of the cases where the source is curved, shields of the same curvature are allowed in addition to the standard slab shields; cylindrical shields are also allowed in the rectangular volume source flux formula. An especially complete treatment of a cylindrical volume source is given, in which dose points may be arbitrarily located both within and outside the source, and a finite cylindrical shield may be considered. Detector points may also be specified as lying within spherical and annular source volumes. The integral functions encountered in these formulas require at most two-dimensional numeric integration in order to evaluate the flux values. The classic flux formulas involving only slab shields and slab, disk, line, sphere and truncated cone sources become some of the many special cases which are given in addition to the more general formulas mentioned above

CO2 flux from Javanese mud volcanism.

Science.gov (United States)

Queißer, M; Burton, M R; Arzilli, F; Chiarugi, A; Marliyani, G I; Anggara, F; Harijoko, A

2017-06-01

Studying the quantity and origin of CO 2 emitted by back-arc mud volcanoes is critical to correctly model fluid-dynamical, thermodynamical, and geochemical processes that drive their activity and to constrain their role in the global geochemical carbon cycle. We measured CO 2 fluxes of the Bledug Kuwu mud volcano on the Kendeng Fold and thrust belt in the back arc of Central Java, Indonesia, using scanning remote sensing absorption spectroscopy. The data show that the expelled gas is rich in CO 2 with a volume fraction of at least 16 vol %. A lower limit CO 2 flux of 1.4 kg s -1 (117 t d -1 ) was determined, in line with the CO 2 flux from the Javanese mud volcano LUSI. Extrapolating these results to mud volcanism from the whole of Java suggests an order of magnitude total CO 2 flux of 3 kt d -1 , comparable with the expected back-arc efflux of magmatic CO 2 . After discussing geochemical, geological, and geophysical evidence we conclude that the source of CO 2 observed at Bledug Kuwu is likely a mixture of thermogenic, biogenic, and magmatic CO 2 , with faulting controlling potential pathways for magmatic fluids. This study further demonstrates the merit of man-portable active remote sensing instruments for probing natural gas releases, enabling bottom-up quantification of CO 2 fluxes.

A combinational fast algorithm for image reconstruction

International Nuclear Information System (INIS)

Wu Zhongquan

1987-01-01

A combinational fast algorithm has been developed in order to increase the speed of reconstruction. First, an interpolation method based on B-spline functions is used in image reconstruction. Next, the influence of the boundary conditions assumed here on the interpolation of filtered projections and on the image reconstruction is discussed. It is shown that this boundary condition has almost no influence on the image in the central region of the image space, because the error of interpolation rapidly decreases by a factor of ten in shifting two pixels from the edge toward the center. In addition, a fast algorithm for computing the detecting angle has been used with the mentioned interpolation algorithm, and the cost for detecting angle computaton is reduced by a factor of two. The implementation results show that in the same subjective and objective fidelity, the computational cost for the interpolation using this algorithm is about one-twelfth of the conventional algorithm

Automatic maximum entropy spectral reconstruction in NMR

International Nuclear Information System (INIS)

Mobli, Mehdi; Maciejewski, Mark W.; Gryk, Michael R.; Hoch, Jeffrey C.

2007-01-01

Developments in superconducting magnets, cryogenic probes, isotope labeling strategies, and sophisticated pulse sequences together have enabled the application, in principle, of high-resolution NMR spectroscopy to biomolecular systems approaching 1 megadalton. In practice, however, conventional approaches to NMR that utilize the fast Fourier transform, which require data collected at uniform time intervals, result in prohibitively lengthy data collection times in order to achieve the full resolution afforded by high field magnets. A variety of approaches that involve nonuniform sampling have been proposed, each utilizing a non-Fourier method of spectrum analysis. A very general non-Fourier method that is capable of utilizing data collected using any of the proposed nonuniform sampling strategies is maximum entropy reconstruction. A limiting factor in the adoption of maximum entropy reconstruction in NMR has been the need to specify non-intuitive parameters. Here we describe a fully automated system for maximum entropy reconstruction that requires no user-specified parameters. A web-accessible script generator provides the user interface to the system

Effect of flux discontinuity on spatial approximations for discrete ordinates methods

International Nuclear Information System (INIS)

Duo, J.I.; Azmy, Y.Y.

2005-01-01

This work presents advances on error analysis of the spatial approximation of the discrete ordinates method for solving the neutron transport equation. Error norms for different non-collided flux problems over a two dimensional pure absorber medium are evaluated using three numerical methods. The problems are characterized by the incoming flux boundary conditions to obtain solutions with different level of differentiability. The three methods considered are the Diamond Difference (DD) method, the Arbitrarily High Order Transport method of the Nodal type (AHOT-N), and of the Characteristic type (AHOT-C). The last two methods are employed in constant, linear and quadratic orders of spatial approximation. The cell-wise error is computed as the difference between the cell-averaged flux computed by each method and the exact value, then the L 1 , L 2 , and L ∞ error norms are calculated. The results of this study demonstrate that the level of differentiability of the exact solution profoundly affects the rate of convergence of the numerical methods' solutions. Furthermore, in the case of discontinuous exact flux the methods fail to converge in the maximum error norm, or in the pointwise sense, in accordance with previous local error analysis. (authors)

Biomaterials and tissue engineering in reconstructive surgery

Indian Academy of Sciences (India)

In spite of some good successes and excellent materials, there are still serious limitations to the performance of implants today, and the paper explains these limitations and develops this theme in order to describe the recent innovations in tissue engineering, which involves a different approach to reconstruction of the body.

Direct computation of harmonic moments for tomographic reconstruction

International Nuclear Information System (INIS)

Nara, Takaaki; Ito, Nobutaka; Takamatsu, Tomonori; Sakurai, Tetsuya

2007-01-01

A novel algorithm to compute harmonic moments of a density function from its projections is presented for tomographic reconstruction. For projection p(r, θ), we define harmonic moments of projection by ∫ π 0 ∫ ∞ -∞ p(r,θ)(re iθ ) n drd θ and show that it coincides with the harmonic moments of the density function except a constant. Furthermore, we show that the harmonic moment of projection of order n can be exactly computed by using n+ 1 projection directions, which leads to an efficient algorithm to reconstruct the vertices of a polygon from projections.

Variations of electron fluxes in the outer radiation belt near the boundary of a trapping region during substorms

International Nuclear Information System (INIS)

Ginzburg, E.A.; Malyshev, A.B.

1979-01-01

Variations of electron fluxes with the energy Esub(e) > 0.7 MeV have been investigated near the high-latitude boundary of electron trapping region in the night and day sections of the magnetosphere. It is found that during substorms the natural changes of the structure of electron fluxes take place. On the night side of the magnetosphere after the flux boundary drift to the equator at the preliminary phase, its sharp drift to the pole at the explosion phase takes place with further slow ( during 1-2 hours) shift to the initial position. The boundary position reconstruction period coincide by duration with the life time of negative bays at magnetograms of the night section stations. On the day side the boundary of electron fluxes recorded drifts to the pole in 30-60 min after the beginning of the substorm exposion phase. The results obtained are interpreted within the framework of the theory of adiabatic drift of trapped electrons and their pitch-angular diffusion under the effect of very low frequency waves

Particle acceleration in relativistic magnetic flux-merging events

Science.gov (United States)

Lyutikov, Maxim; Sironi, Lorenzo; Komissarov, Serguei S.; Porth, Oliver

2017-12-01

Using analytical and numerical methods (fluid and particle-in-cell simulations) we study a number of model problems involving merger of magnetic flux tubes in relativistic magnetically dominated plasma. Mergers of current-carrying flux tubes (exemplified by the two-dimensional `ABC' structures) and zero-total-current magnetic flux tubes are considered. In all cases regimes of spontaneous and driven evolution are investigated. We identify two stages of particle acceleration during flux mergers: (i) fast explosive prompt X-point collapse and (ii) ensuing island merger. The fastest acceleration occurs during the initial catastrophic X-point collapse, with the reconnection electric field of the order of the magnetic field. During the X-point collapse, particles are accelerated by charge-starved electric fields, which can reach (and even exceed) values of the local magnetic field. The explosive stage of reconnection produces non-thermal power-law tails with slopes that depend on the average magnetization . For plasma magnetization 2$ the spectrum power-law index is 2$ ; in this case the maximal energy depends linearly on the size of the reconnecting islands. For higher magnetization, 2$ , the spectra are hard, , yet the maximal energy \\text{max}$ can still exceed the average magnetic energy per particle, , by orders of magnitude (if is not too close to unity). The X-point collapse stage is followed by magnetic island merger that dissipates a large fraction of the initial magnetic energy in a regime of forced magnetic reconnection, further accelerating the particles, but proceeds at a slower reconnection rate.

Fast flux test facility hazards assessment

International Nuclear Information System (INIS)

Sutton, L.N.

1994-01-01

This document establishes the technical basis in support of Emergency Planning Activities for the Fast Flux Test Facility on the Hanford Site. The document represents an acceptable interpretation of the implementing guidance document for DOE Order 5500.3A. Through this document, the technical basis for the development of facility specific Emergency Action Levels and the Emergency Planning Zone is demonstrated

Sunspots and the physics of magnetic flux tubes. II. Aerodynamic drag

International Nuclear Information System (INIS)

Parker, E.N.

1979-01-01

The aerodynamic drag on a slender flux tube stretched vertically across a convective cell may push the flux tube into the updrafts or into the downdrafts, depending on the density stratification of the convecting fluid and the asymmetry of the fluid motions. The drag is approximately proportional to the local kinetic energy density, so the density stratification weights the drag in favor of the upper layers where the density is low, tending to push the vertical tube into the downdrafts. If, however, the horizontal motions in the convective cell are concentrated toward the bottom of the cell, they may dominate over the upper layers, pushing the tube into the updrafts. In the simple, idealized circumstance of a vertical tube extending across a fluid of uniform density in a convective cell that is symmetric about its midplane, the net aerodynamic drag vanishes in lowest order. The higher order contributions, including the deflection of the tube, then provide a nonvanishing force pushing the tube into a stable equilibrium midway between the updraft and the downdraft.It is pointed out that in the strongly stratified convective zone of the Sun, a downdraft herds flux tubes together into a cluster, while an updraft disperses them. To account for the observed strong cohesion of the cluster of flux tubes that make up a sunspot, we propose a downdraft of the order 2 km s - 1 through the cluster of seprate tubes beneath the sunspot

Recoil velocity at second post-Newtonian order for spinning black hole binaries

International Nuclear Information System (INIS)

Racine, Etienne; Buonanno, Alessandra; Kidder, Larry

2009-01-01

We compute the flux of linear momentum carried by gravitational waves emitted from spinning binary black holes at second post-Newtonian (2PN) order for generic orbits. In particular we provide explicit expressions of three new types of terms, namely, next-to-leading order spin-orbit terms at 1.5 post-Newtonian (1.5PN) order, spin-orbit tail terms at 2PN order, and spin-spin terms at 2PN order. Restricting ourselves to quasicircular orbits, we integrate the linear-momentum flux over time to obtain the recoil velocity as function of orbital frequency. We find that in the so-called superkick configuration the higher-order spin corrections can increase the recoil velocity up to a factor ∼3 with respect to the leading-order PN prediction. Whereas the recoil velocity computed in PN theory within the adiabatic approximation can accurately describe the early inspiral phase, we find that its fast increase during the late inspiral and plunge, and the arbitrariness in determining until when it should be trusted, makes the PN predictions for the total recoil not very accurate and robust. Nevertheless, the linear-momentum flux at higher PN orders can be employed to build more reliable resummed expressions aimed at capturing the nonperturbative effects until merger. Furthermore, we provide expressions valid for generic orbits, and accurate at 2PN order, for the energy and angular momentum carried by gravitational waves emitted from spinning binary black holes. Specializing to quasicircular orbits we compute the spin-spin terms at 2PN order in the expression for the evolution of the orbital frequency and found agreement with Mikoczi, Vasuth, and Gergely. We also verified that in the limit of extreme mass ratio our expressions for the energy and angular momentum fluxes match the ones of Tagoshi, Shibata, Tanaka, and Sasaki obtained in the context of black hole perturbation theory.

DETECTING GRAVITY MODES IN THE SOLAR {sup 8} B NEUTRINO FLUX

Energy Technology Data Exchange (ETDEWEB)

Lopes, Ilídio [Centro Multidisciplinar de Astrofísica, Instituto Superior Técnico, Universidade de Lisboa, Av. Rovisco Pais, 1049-001 Lisboa (Portugal); Turck-Chièze, Sylvaine, E-mail: ilidio.lopes@ist.utl.pt, E-mail: ilopes@uevora.pt, E-mail: sylvaine.turck-chieze@cea.fr [CEA/IRFU/Service d' Astrophysique, CE Saclay, F-91191 Gif sur Yvette (France)

2014-09-10

The detection of gravity modes produced in the solar radiative zone has been a challenge in modern astrophysics for more than 30 yr and their amplitude in the core is not yet determined. In this Letter, we develop a new strategy to look for standing gravity modes through solar neutrino fluxes. We note that due to a resonance effect, the gravity modes of low degree and low order have the largest impact on the {sup 8} B neutrino flux. The strongest effect is expected to occur for the dipole mode with radial order 2, corresponding to periods of about 1.5 hr. These standing gravity waves produce temperature fluctuations that are amplified by a factor of 170 in the boron neutrino flux for the corresponding period, in consonance with the gravity modes. From current neutrino observations, we determine that the maximum temperature variation due to the gravity modes in the Sun's core is smaller than 5.8 × 10{sup –4}. This study clearly shows that due to their high sensitivity to the temperature, the {sup 8} B neutrino flux time series is an excellent tool to determine the properties of gravity modes in the solar core. Moreover, if gravity mode footprints are discovered in the {sup 8} B neutrino flux, this opens a new line of research to probe the physics of the solar core as non-standing gravity waves of higher periods cannot be directly detected by helioseismology but could leave their signature on boron neutrino or on other neutrino fluxes.

Plasma–Surface Interactions Under High Heat and Particle Fluxes

Directory of Open Access Journals (Sweden)

Gregory De Temmerman

2013-01-01

Full Text Available The plasma-surface interactions expected in the divertor of a future fusion reactor are characterized by extreme heat and particle fluxes interacting with the plasma-facing surfaces. Powerful linear plasma generators are used to reproduce the expected plasma conditions and allow plasma-surface interactions studies under those very harsh conditions. While the ion energies on the divertor surfaces of a fusion device are comparable to those used in various plasma-assited deposition and etching techniques, the ion (and energy fluxes are up to four orders of magnitude higher. This large upscale in particle flux maintains the surface under highly non-equilibrium conditions and bring new effects to light, some of which will be described in this paper.

An implicit flux-split algorithm to calculate hypersonic flowfields in chemical equilibrium

Science.gov (United States)

Palmer, Grant

1987-01-01

An implicit, finite-difference, shock-capturing algorithm that calculates inviscid, hypersonic flows in chemical equilibrium is presented. The flux vectors and flux Jacobians are differenced using a first-order, flux-split technique. The equilibrium composition of the gas is determined by minimizing the Gibbs free energy at every node point. The code is validated by comparing results over an axisymmetric hemisphere against previously published results. The algorithm is also applied to more practical configurations. The accuracy, stability, and versatility of the algorithm have been promising.

Transmutation and neutron flux studies with fission chambers in the MEGAPIE target

International Nuclear Information System (INIS)

Chabod, S.; Foucher, Y.; Letourneau, A.; Marie, F.; Toussaint, J.C.; Blandin, Ch.; Chartier, F.; Fioni, G.

2005-01-01

Eight fission micro chambers will be inserted inside the central rod of the 1 MW liquid Pb-Bi MEGAPIE target in order to study the transmutation of two major actinides and to measure the neutron flux at a level of 5%. These chambers were developed for high neutron fluxes and tested at Laue Langevin Institute. (authors)

Displacement disorder and reconstruction of the (001) face of tungsten

International Nuclear Information System (INIS)

Egorushkin, V.E.; Kul'ment'ev, A.I.; Savushkin, E.V.

1992-01-01

The reconstruction of the (001) border of tungsten is examined taking into consideration random static displacements of surface atoms in the high-temperature (1 x 1) phase. A microscopic model is proposed, in which the creation of c(2 x 2) phase is described as a transition of the Jahn-Teller type and an ordering of static displacements. It is shown that displacement disorder induces instability of (001) tungsten with respect to reconstruction. The effect of a uniform electric field on a disordered reconstructing surface is examined. A possible reason is given for pronounced differences in the results of investigations of the structural conversion of the (001) face in tungsten when different experimental methods are used

A new iterative algorithm to reconstruct the refractive index.

Science.gov (United States)

Liu, Y J; Zhu, P P; Chen, B; Wang, J Y; Yuan, Q X; Huang, W X; Shu, H; Li, E R; Liu, X S; Zhang, K; Ming, H; Wu, Z Y

2007-06-21

The latest developments in x-ray imaging are associated with techniques based on the phase contrast. However, the image reconstruction procedures demand significant improvements of the traditional methods, and/or new algorithms have to be introduced to take advantage of the high contrast and sensitivity of the new experimental techniques. In this letter, an improved iterative reconstruction algorithm based on the maximum likelihood expectation maximization technique is presented and discussed in order to reconstruct the distribution of the refractive index from data collected by an analyzer-based imaging setup. The technique considered probes the partial derivative of the refractive index with respect to an axis lying in the meridional plane and perpendicular to the propagation direction. Computer simulations confirm the reliability of the proposed algorithm. In addition, the comparison between an analytical reconstruction algorithm and the iterative method has been also discussed together with the convergent characteristic of this latter algorithm. Finally, we will show how the proposed algorithm may be applied to reconstruct the distribution of the refractive index of an epoxy cylinder containing small air bubbles of about 300 micro of diameter.

Anyonic order parameters for discrete gauge theories on the lattice

International Nuclear Information System (INIS)

Bais, F.A.; Romers, J.C.

2009-01-01

We present a new family of gauge invariant non-local order parameters Δ α A for (non-abelian) discrete gauge theories on a Euclidean lattice, which are in one-to-one correspondence with the excitation spectrum that follows from the representation theory of the quantum double D(H) of the finite group H. These combine magnetic flux-sector labeled by a conjugacy class with an electric representation of the centralizer subgroup that commutes with the flux. In particular, cases like the trivial class for magnetic flux, or the trivial irrep for electric charge, these order parameters reduce to the familiar Wilson and the 't Hooft operators, respectively. It is pointed out that these novel operators are crucial for probing the phase structure of a class of discrete lattice models we define, using Monte Carlo simulations.

Research on compressive sensing reconstruction algorithm based on total variation model

Science.gov (United States)

Gao, Yu-xuan; Sun, Huayan; Zhang, Tinghua; Du, Lin

2017-12-01

Compressed sensing for breakthrough Nyquist sampling theorem provides a strong theoretical , making compressive sampling for image signals be carried out simultaneously. In traditional imaging procedures using compressed sensing theory, not only can it reduces the storage space, but also can reduce the demand for detector resolution greatly. Using the sparsity of image signal, by solving the mathematical model of inverse reconfiguration, realize the super-resolution imaging. Reconstruction algorithm is the most critical part of compression perception, to a large extent determine the accuracy of the reconstruction of the image.The reconstruction algorithm based on the total variation (TV) model is more suitable for the compression reconstruction of the two-dimensional image, and the better edge information can be obtained. In order to verify the performance of the algorithm, Simulation Analysis the reconstruction result in different coding mode of the reconstruction algorithm based on the TV reconstruction algorithm. The reconstruction effect of the reconfigurable algorithm based on TV based on the different coding methods is analyzed to verify the stability of the algorithm. This paper compares and analyzes the typical reconstruction algorithm in the same coding mode. On the basis of the minimum total variation algorithm, the Augmented Lagrangian function term is added and the optimal value is solved by the alternating direction method.Experimental results show that the reconstruction algorithm is compared with the traditional classical algorithm based on TV has great advantages, under the low measurement rate can be quickly and accurately recovers target image.

Edge plasma density reconstruction for fast monoenergetic lithium beam probing

International Nuclear Information System (INIS)

Sasaki, S.; Takamura, S.; Ueda, M.; Iguchi, H.; Fujita, J.; Kadota, K.

1993-01-01

Two different electron density reconstruction methods for 8-keV neutral lithium beam probing have been developed for the Compact Helical System (CHS). Density dependences on emission and ionization processes are included by using effective rate coefficients obtained from the collisional radiative model. Since the two methods differ in the way the local beam density in the plasma is determined, the methods have different applicable electron densities. The beam attenuation is calculated by iteration from the electron density profile in method I. In method II, the beam remainder at the observation point z is determined by integrating the Li I emission intensity from z toward the position of emission tail-off. At the emission tail-off, the fast lithium beam is completely attenuated. Selecting an appropriate method enables us to obtain edge electron density profile well inside the last closed flux surface for various ranges of plasma densities (10 12 --5x10 13 cm -3 ). The electron density profiles reconstructed by these two different methods are in good agreement with each other and are consistent with results from ruby laser Thomson scattering

Scalar flux modeling in turbulent flames using iterative deconvolution

Science.gov (United States)

Nikolaou, Z. M.; Cant, R. S.; Vervisch, L.

2018-04-01

In the context of large eddy simulations, deconvolution is an attractive alternative for modeling the unclosed terms appearing in the filtered governing equations. Such methods have been used in a number of studies for non-reacting and incompressible flows; however, their application in reacting flows is limited in comparison. Deconvolution methods originate from clearly defined operations, and in theory they can be used in order to model any unclosed term in the filtered equations including the scalar flux. In this study, an iterative deconvolution algorithm is used in order to provide a closure for the scalar flux term in a turbulent premixed flame by explicitly filtering the deconvoluted fields. The assessment of the method is conducted a priori using a three-dimensional direct numerical simulation database of a turbulent freely propagating premixed flame in a canonical configuration. In contrast to most classical a priori studies, the assessment is more stringent as it is performed on a much coarser mesh which is constructed using the filtered fields as obtained from the direct simulations. For the conditions tested in this study, deconvolution is found to provide good estimates both of the scalar flux and of its divergence.

GCR flux reconstruction during the last three centuries validated by the Ti-44 in meteorites and Be-10 in ice

Science.gov (United States)

Cini Castagnoli, G.; Cane, D.; Taricco, C.; Bhandari, N.

2003-04-01

In a previous work [1] we deduced that during prolonged minima of solar activity since 1700 the galactic cosmic rays (GCR) flux was much higher (˜2 times) respect to what we can infer from GCR modulation deduced solely by the Sunspot Number series. This flux was higher respect to what we observe in the last decades by Neutron Monitor or balloon and spacecraft-borne detectors and confirmed by the three fresh-fall meteorites that we have measured during solar cycle 22. Recently we have deduced the GCR annual mean spectra for the last 300 years [2], starting from the open solar magnetic flux proposed by Solanki et al. [3]. Utilizing the GCR flux we have calculated the 44Ti (T1/2 = 59.2 y) activity in meteorites taking into account the cross sections for its production from the main target element Fe and Ni. We compare the calculated activity with our measurements of the cosmogenic 44Ti in different chondrites fell in the period 1810-1997. The results are in close agreement both in phase and amplitude. The same procedure has been adopted for calculating the production rate of 10Be in atmosphere. Normalizing to the concentration in ice in the solar cycles 20 and 21 we obtain a good agreement with the 10Be profile in Dye3 core [4]. These results demonstrate that our inference of the GCR flux in the past 300 years is reliable. [1] Bonino G., Cini Castagnoli G., Bhandari N., Taricco C., textit {Science}, 270, 1648, 1995 [2] Bonino G., Cini Castagnoli G., Cane D., Taricco C. and Bhandari N., textit {Proc. XXVII Intern. Cosmic Ray Conf.} (Hamburg, 2001) 3769-3772. [3] Solanki S.K., Schüssler M. and Fligge M.,Nature, 408, 445, 2000 [4] Beer J. et al., private communication

The phonological neighbourhood effect on short-term memory for order.

Science.gov (United States)

Clarkson, L; Roodenrys, S; Miller, L M; Hulme, C

2017-03-01

There is a growing body of literature that suggests that long-term memory (LTM) and short-term memory (STM) structures that were once thought to be distinct are actually co-dependent, and that LTM can aid retrieval from STM. The mechanism behind this effect is commonly argued to act on item memory but not on order memory. The aim of the current study was to examine whether LTM could exert an influence on STM for order by examining an effect attributed to LTM, the phonological neighbourhood effect, in a task that reduced the requirement to retain item information. In Experiment 1, 18 participants completed a serial reconstruction task where neighbourhood density alternated within the lists. In Experiment 2, 22 participants completed a serial reconstruction task using pure lists of dense and sparse neighbourhood words. In Experiment 3, 22 participants completed a reconstruction task with both mixed and pure lists. There was a significant effect of neighbourhood density with better recall for dense than sparse neighbourhood words in pure lists but not in mixed lists. Results suggest that LTM exerts an influence prior to that proposed by many models of memory for order.

Reconstructive phase transition in (NH4)3TiF7 accompanied by the ordering of TiF6 octahedra.

Science.gov (United States)

Molokeev, Maxim; Misjul, S V; Flerov, I N; Laptash, N M

2014-12-01

An unusual phase transition P4/mnc → Pa\\bar 3 has been detected after cooling the (NH4)3TiF7 compound. Some TiF6 octahedra, which are disordered in the room-temperature tetragonal structure, become ordered in the low-temperature cubic phase due to the disappearance of the fourfold axis. Other TiF6 octahedra undergo large rotations resulting in huge displacements of the F atoms by 1.5-1.8 Å that implies a reconstructive phase transition. It was supposed that phases P4/mbm and Pm\\bar 3m could be a high-temperature phase and a parent phase, respectively, in (NH4)3TiF7. Therefore, the sequence of phase transitions can be written as Pm\\bar 3m → P4/mbm → P4/mnc → Pa\\bar 3. The interrelation between (NH4)3TiF7, (NH4)3GeF7 and (NH4)3PbF7 is found, which allows us to suppose phase transitions in relative compounds.

Geneva University - Superconducting flux quantum bits: fabricated quantum objects

CERN Multimedia

2007-01-01

Ecole de physique Département de physique nucléaire et corspusculaire 24, Quai Ernest-Ansermet 1211 GENEVE 4 Tél: (022) 379 62 73 Fax: (022) 379 69 92 Lundi 29 janvier 2007 COLLOQUE DE LA SECTION DE PHYSIQUE 17 heures - Auditoire Stueckelberg Superconducting flux quantum bits: fabricated quantum objects Prof. Hans Mooij / Kavli Institute of Nanoscience, Delft University of Technology The quantum conjugate variables of a superconductor are the charge or number of Cooper pairs, and the phase of the order parameter. In circuits that contain small Josephson junctions, these quantum properties can be brought forward. In Delft we study so-called flux qubits, superconducting rings that contain three small Josephson junctions. When a magnetic flux of half a flux quantum is applied to the loop, there are two states with opposite circulating current. For suitable junction parameters, a quantum superposition of those macroscopic states is possible. Transitions can be driven with resonant microwaves. These quantum ...

Development of Image Reconstruction Algorithms in electrical Capacitance Tomography

International Nuclear Information System (INIS)

Fernandez Marron, J. L.; Alberdi Primicia, J.; Barcala Riveira, J. M.

2007-01-01

The Electrical Capacitance Tomography (ECT) has not obtained a good development in order to be used at industrial level. That is due first to difficulties in the measurement of very little capacitances (in the range of femto farads) and second to the problem of reconstruction on- line of the images. This problem is due also to the small numbers of electrodes (maximum 16), that made the usual algorithms of reconstruction has many errors. In this work it is described a new purely geometrical method that could be used for this purpose. (Author) 4 refs

CAT reconstruction and potting comparison of a LMFBR fuel bundle

International Nuclear Information System (INIS)

Betten, P.R.; Tow, D.M.

1984-04-01

A standard Liquid Metal Fast Breeder Reactor (LMFBR) subassembly used in the Experimental Breeder Reactor II (EBR-II) was investigated, by remote techniques, for fuel bundle distortion by both nondestructive and destructive methods, and the results from both methods were compared. The non-destructive method employed neutron tomography to reconstruct the locations of fuel elements through the use of a maximum entropy reconstruction algorithm known as MENT. The destructive method consisted of ''potting'' (a technique that embeds and permanently fixes the fuel elements in a solid matrix) the subassembly, and then cutting and polishing the individual sections. The comparison indicated that the tomography reconstruction provided good results in describing the bundle geometry and spacer-wire locations, with the overall resolution being on the order of a spacer-wire diameter. A dimensional consistency check indicated that the element and spacer-wire dimensions were accurately reproduced in the reconstruction

Application of the fractional Fourier transform to image reconstruction in MRI.

Science.gov (United States)

Parot, Vicente; Sing-Long, Carlos; Lizama, Carlos; Tejos, Cristian; Uribe, Sergio; Irarrazaval, Pablo

2012-07-01

The classic paradigm for MRI requires a homogeneous B(0) field in combination with linear encoding gradients. Distortions are produced when the B(0) is not homogeneous, and several postprocessing techniques have been developed to correct them. Field homogeneity is difficult to achieve, particularly for short-bore magnets and higher B(0) fields. Nonlinear magnetic components can also arise from concomitant fields, particularly in low-field imaging, or intentionally used for nonlinear encoding. In any of these situations, the second-order component is key, because it constitutes the first step to approximate higher-order fields. We propose to use the fractional Fourier transform for analyzing and reconstructing the object's magnetization under the presence of quadratic fields. The fractional fourier transform provides a precise theoretical framework for this. We show how it can be used for reconstruction and for gaining a better understanding of the quadratic field-induced distortions, including examples of reconstruction for simulated and in vivo data. The obtained images have improved quality compared with standard Fourier reconstructions. The fractional fourier transform opens a new paradigm for understanding the MR signal generated by an object under a quadratic main field or nonlinear encoding. Copyright © 2011 Wiley Periodicals, Inc.

Perturbation theory for BAO reconstructed fields: One-loop results in the real-space matter density field

Science.gov (United States)

Hikage, Chiaki; Koyama, Kazuya; Heavens, Alan

2017-08-01

We compute the power spectrum at one-loop order in standard perturbation theory for the matter density field to which a standard Lagrangian baryonic acoustic oscillation (BAO) reconstruction technique is applied. The BAO reconstruction method corrects the bulk motion associated with the gravitational evolution using the inverse Zel'dovich approximation (ZA) for the smoothed density field. We find that the overall amplitude of one-loop contributions in the matter power spectrum substantially decreases after reconstruction. The reconstructed power spectrum thereby approaches the initial linear spectrum when the smoothed density field is close enough to linear, i.e., the smoothing scale Rs≳10 h-1 Mpc . On smaller Rs, however, the deviation from the linear spectrum becomes significant on large scales (k ≲Rs-1 ) due to the nonlinearity in the smoothed density field, and the reconstruction is inaccurate. Compared with N-body simulations, we show that the reconstructed power spectrum at one-loop order agrees with simulations better than the unreconstructed power spectrum. We also calculate the tree-level bispectrum in standard perturbation theory to investigate non-Gaussianity in the reconstructed matter density field. We show that the amplitude of the bispectrum significantly decreases for small k after reconstruction and that the tree-level bispectrum agrees well with N-body results in the weakly nonlinear regime.

SEARCH FOR GLOBAL f-MODES AND p-MODES IN THE {sup 8}B NEUTRINO FLUX

Energy Technology Data Exchange (ETDEWEB)

Lopes, Ilídio, E-mail: ilidio.lopes@ist.utl.pt, E-mail: ilopes@uevora.pt [Centro Multidisciplinar de Astrofísica, Instituto Superior Técnico, Universidade de Lisboa, Av. Rovisco Pais, 1049-001 Lisboa (Portugal); Departamento de Física, Escola de Ciências e Tecnologia, Universidade de Évora, Colégio Luis António Verney, 7002-554 Évora (Portugal)

2013-11-01

The impact of global acoustic modes on the {sup 8}B neutrino flux time series is computed for the first time. It is shown that the time fluctuations of the {sup 8}B neutrino flux depend on the amplitude of acoustic eigenfunctions in the region where the {sup 8}B neutrino flux is produced: modes with low n (or order) that have eigenfunctions with a relatively large amplitude in the Sun's core strongly affect the neutrino flux; conversely, modes with high n that have eigenfunctions with a minimal amplitude in the Sun's core have a very small impact on the neutrino flux. It was found that the global modes with a larger impact on the {sup 8}B neutrino flux have a frequency of oscillation in the interval 250 μHz to 500 μHz (or a period in the interval 30 minutes to 70 minutes), such as the f-modes (n = 0) for the low degrees, radial modes of order n ≤ 3, and the dipole mode of order n = 1. Their corresponding neutrino eigenfunctions are very sensitive to the solar inner core and are unaffected by the variability of the external layers of the solar surface. If time variability of neutrinos is observed for these modes, it will lead to new ways of improving the sound speed profile inversion in the central region of the Sun.

Anatomically-aided PET reconstruction using the kernel method.

Science.gov (United States)

Hutchcroft, Will; Wang, Guobao; Chen, Kevin T; Catana, Ciprian; Qi, Jinyi

2016-09-21

This paper extends the kernel method that was proposed previously for dynamic PET reconstruction, to incorporate anatomical side information into the PET reconstruction model. In contrast to existing methods that incorporate anatomical information using a penalized likelihood framework, the proposed method incorporates this information in the simpler maximum likelihood (ML) formulation and is amenable to ordered subsets. The new method also does not require any segmentation of the anatomical image to obtain edge information. We compare the kernel method with the Bowsher method for anatomically-aided PET image reconstruction through a simulated data set. Computer simulations demonstrate that the kernel method offers advantages over the Bowsher method in region of interest quantification. Additionally the kernel method is applied to a 3D patient data set. The kernel method results in reduced noise at a matched contrast level compared with the conventional ML expectation maximization algorithm.

Comparison of the two different standard flux-to-dose rate conversion factors

International Nuclear Information System (INIS)

Metghalchi, M.; Ashrafi, R.

1983-01-01

A very useful and simple way of obtaining the dose rate associated with neutron or photon fluxes is to multiply these fluxes by the appropriate flux-to-dose rate conversion factors. Two basic standard flux-to-dose rate conversion factors. are being used in all over the world, those recommended by the International Commission on Radiation Protection (ICRP) and the American National Standars (ANS). The purpose of this paper is to compare these two standard with each other. The comparison proved that the dose rate associated with a specific neutron flux, obtained by the ANS flux-to-dose rate conversion factors is usually higher than those calculated by the ICRP's conversion factors. Whereas in the case of the photon, in all energies, the difference between the dose rates obtained by these two standard flux-to-dose rate conversion factors are noticeable, and the ANS results are higher than the ICRP ones. So, it should be noted that for a specific neutron or photon flux the dose rate obtained by the ANS flux-to-dose rate conversion factors are more conservative than those obtained by the ICRP's. Therefore, in order to establish a more reasonable new standard flux-to-dose rate conversion factors, more work should be done. (author)

iMS2Flux – a high–throughput processing tool for stable isotope labeled mass spectrometric data used for metabolic flux analysis

Directory of Open Access Journals (Sweden)

Poskar C Hart

2012-11-01

Full Text Available Abstract Background Metabolic flux analysis has become an established method in systems biology and functional genomics. The most common approach for determining intracellular metabolic fluxes is to utilize mass spectrometry in combination with stable isotope labeling experiments. However, before the mass spectrometric data can be used it has to be corrected for biases caused by naturally occurring stable isotopes, by the analytical technique(s employed, or by the biological sample itself. Finally the MS data and the labeling information it contains have to be assembled into a data format usable by flux analysis software (of which several dedicated packages exist. Currently the processing of mass spectrometric data is time-consuming and error-prone requiring peak by peak cut-and-paste analysis and manual curation. In order to facilitate high-throughput metabolic flux analysis, the automation of multiple steps in the analytical workflow is necessary. Results Here we describe iMS2Flux, software developed to automate, standardize and connect the data flow between mass spectrometric measurements and flux analysis programs. This tool streamlines the transfer of data from extraction via correction tools to 13C-Flux software by processing MS data from stable isotope labeling experiments. It allows the correction of large and heterogeneous MS datasets for the presence of naturally occurring stable isotopes, initial biomass and several mass spectrometry effects. Before and after data correction, several checks can be performed to ensure accurate data. The corrected data may be returned in a variety of formats including those used by metabolic flux analysis software such as 13CFLUX, OpenFLUX and 13CFLUX2. Conclusion iMS2Flux is a versatile, easy to use tool for the automated processing of mass spectrometric data containing isotope labeling information. It represents the core framework for a standardized workflow and data processing. Due to its flexibility

Adaptive wavelet tight frame construction for accelerating MRI reconstruction

Directory of Open Access Journals (Sweden)

Genjiao Zhou

2017-09-01

Full Text Available The sparsity regularization approach, which assumes that the image of interest is likely to have sparse representation in some transform domain, has been an active research area in image processing and medical image reconstruction. Although various sparsifying transforms have been used in medical image reconstruction such as wavelet, contourlet, and total variation (TV etc., the efficiency of these transforms typically rely on the special structure of the underlying image. A better way to address this issue is to develop an overcomplete dictionary from the input data in order to get a better sparsifying transform for the underlying image. However, the general overcomplete dictionaries do not satisfy the so-called perfect reconstruction property which ensures that the given signal can be perfectly represented by its canonical coefficients in a manner similar to orthonormal bases, resulting in time consuming in the iterative image reconstruction. This work is to develop an adaptive wavelet tight frame method for magnetic resonance image reconstruction. The proposed scheme incorporates the adaptive wavelet tight frame approach into the magnetic resonance image reconstruction by solving a l0-regularized minimization problem. Numerical results show that the proposed approach provides significant time savings as compared to the over-complete dictionary based methods with comparable performance in terms of both peak signal-to-noise ratio and subjective visual quality.

Impediments to the successful reconstruction of African immigrant ...

African Journals Online (AJOL)

affect the reconstruction of immigrant teachers' professional identities (Hutchison, ... 1979; Turner, 1982) is a social psychological theory that sets out to explain group ... maintain our self-esteem our group needs to compare favourably with other groups. ... In order for immigrant teachers in this study to overcome social,.

On-line fast flux measurements in the BR2 reactor

International Nuclear Information System (INIS)

Vermeeren, L.

2009-01-01

Since 2001, CEA-Cadarache and the Belgian Nuclear Research Centre SCK-CEN are collaborating on the development and in-pile qualification of subminiature fission chambers (diameter of 1.5 mm). Initially, efforts concentrated on fission chambers for the in-pile measurement of thermal fluxes (with 235 U as fissile material). Meanwhile successful long-term tests of the prototypes have been performed in various environments: in low temperature (40-100 degress Celsius) BR2 pool water (up to a thermal neutron fluence of 3 1 0 21 n/cm 2 ) and in the CALLISTO PWR loop (300 degrees Celsius, 155 bars). The long-term qualification of derived industrial detectors (Photonis CFUZ53) in CALLISTO is still ongoing. However, for various types of irradiations in research reactors, the knowledge of the evolution of the fast neutron flux is even of more interest than the thermal flux data. Therefore the collaboration program was extended to the development and the in-pile qualification of subminiature or miniature fission chambers (with 3 mm diameter) for fast neutron detection, for which 242 Pu was selected as the optimal fissile material. In order to achieve the on-line in-pile measurement of fast neutron flux, the fission chambers will be operated in the Campbelling mode (based on the mean square fluctuation of the detector current). In this mode the gamma induced contribution to the signal can be efficiently suppressed. Moreover, a data processing software will take into account the evolution of the fissile deposit in order to assess on-line the fast flux sensitivity and to correct for the low energy neutron contributions. The final objective is to qualify a Fast Neutron Detector System (FNDS) able to provide on-line data for local fast neutron fluxes in Material Testing Reactors. The on-line measurement of the fast neutron flux would contribute significantly to the characterization of the irradiation conditions during test experiments with materials and innovative fuel elements

The energy dependence of photon-flux and efficiency in the NRF measurement

Energy Technology Data Exchange (ETDEWEB)

Agar, Osman [Institut fuer Kernphysik, Technische Universitaet Darmstadt, 64289 Darmstadt (Germany); Karamanoglu Mehmetbey University, Department of Physics, 70100 Karaman (Turkey); Gayer, Udo; Merter, Laura; Pai, Haridas; Pietralla, Norbert; Ries, Philipp; Romig, Christopher; Werner, Volker; Schillling, Marcel; Zweidinger, Markus [Institut fuer Kernphysik, Technische Universitaet Darmstadt, 64289 Darmstadt (Germany)

2016-07-01

The calibration of the detector efficiency and the photon-flux distribution play an important role during the analysis of nuclear resonance fluorescence (NRF) measurements. The nucleus {sup 11}B is a frequently used calibration target with well-known photo-excitation cross sections. The product of photon flux and efficiency is determined exploiting γ-ray transitions of the {sup 11}B monitoring target. Photon-flux calibrations from numerous measurements at the superconducting Darmstadt electron linear accelerator (S-DALINAC) are carried out up to the neutron separation threshold, in order to obtain a system check of influences of absorbers on the flux, and to check against different GEANT models as well as parametrizations of the Schiff formula.

Anisotrophic currents and flux jumps in high-Tc superconducting films with self-organized arrays of planar defects

International Nuclear Information System (INIS)

Yurchenko, V.V.; Qviller, A.J.; Mozhaev, P.B.; Mozhaeva, J.E.; Hansen, J.B.; Jacobsen, C.S.; Kotelyanskii, I.M.; Pan, A.V.; Johansen, T.H.

2010-01-01

Regular arrays of planar defects with a period of a few nanometers can be introduced in superconducting YBa 2 Cu 3 O 7-δ (YBCO) thin films by depositing them on vicinal (also called miscut or tilted) substrates. This results in the anisotropy of critical currents flowing in the plane of the film. We present results of real-time magneto-optical imaging (MOI) of magnetic flux distribution and dynamics in a series of YBCO thin films deposited on NdGaO 3 substrates with different miscut angles θ. MOI allows reconstructing the current flow profiles. From the angle formed between domains with different directions of the current flow we determine the anisotropy parameter of the in-plane current, as well as its field and temperature dependences. The artificially introduced defects also have a dramatic effect on the dynamics of the flux propagation: for 10 o o the magnetic flux propagates along the easy channels intermittently, i.e. in a form of flux jumps. This behavior is indicative of thermo-magnetic instability in superconductors, but we argue that this effect can be of a different nature.

Non-axisymmetric equilibrium reconstruction and suppression of density limit disruptions in a current-carrying stellarator

Science.gov (United States)

Ma, Xinxing; Ennis, D. A.; Hanson, J. D.; Hartwell, G. J.; Knowlton, S. F.; Maurer, D. A.

2017-10-01

Non-axisymmetric equilibrium reconstructions have been routinely performed with the V3FIT code in the Compact Toroidal Hybrid (CTH), a stellarator/tokamak hybrid. In addition to 50 external magnetic measurements, 160 SXR emissivity measurements are incorporated into V3FIT to reconstruct the magnetic flux surface geometry and infer the current distribution within the plasma. Improved reconstructions of current and q profiles provide insight into understanding the physics of density limit disruptions observed in current-carrying discharges in CTH. It is confirmed that the final scenario of the density limit of CTH plasmas is consistent with classic observations in tokamaks: current profile shrinkage leads to growing MHD instabilities (tearing modes) followed by a loss of MHD equilibrium. It is also observed that the density limit at a given current linearly increases with increasing amounts of 3D shaping fields. Consequently, plasmas with densities up to two times the Greenwald limit are attained. Equilibrium reconstructions show that addition of 3D fields effectively moves resonance surfaces towards the edge of the plasma where the current profile gradient is less, providing a stabilizing effect. This work is supported by US Department of Energy Grant No. DE-FG02-00ER54610.

A simple heat transfer model for a heat flux plate under transient conditions

International Nuclear Information System (INIS)

Ryan, L.; Dale, J.D.

1985-01-01

Heat flux plates are used for measuring rates of heat transfer through surfaces under steady state and transient conditions. Their usual construction is to have a resistive layer bounded by thermopiles and an exterior layer for protection. If properly designed and constructed a linear relationship between the thermopile generated voltage and heat flux results and calibration under steady state conditions is straight forward. Under transient conditions however the voltage output from a heat flux plate cannot instantaneously follow the heat flux because of the thermal capacitance of the plate and the resulting time lag. In order to properly interpret the output of a heat flux plate used under transient conditions a simple heat transfer model was constructed and tested. (author)

PODESY program for flux mapping of CNA II reactor:

International Nuclear Information System (INIS)

Ribeiro Guevara, Sergio

1988-01-01

The PODESY program, developed by KWU, calculates the spatial flux distribution of CNA II reactor through a three-dimensional expansion of 90 incore detector measurements. The calculation is made in three steps: a) short-term calculation which considers the control rod positions and it has to be done each time the flux mapping is calculated; b) medium-term calculation which includes local burn-up dependent calculation made by diffusion methods in macro-cell configurations (seven channels in hexagonal distribution), and c) long-term calculation, or macroscopic flux determination, that is a fitting and expansion of measured fluxes, previously corrected by local effects, using the eigen functions of the modified diffusion equation. The paper outlines development of step (c) of the calculation. The incore detectors have been located in the central zone of the core. In order to obtain low errors in the expansion procedure it is necessary to include additional points, whose flux values are assumed to be equivalent to detector measurements. These flux values are calculated with detector measurements and a spatial flux distribution calculated by a PUMA code. This PUMA calculation employs a smooth burn-up distribution (local burn-up variations are considered in step (b) of the whole calculation) representing the state of core evolution at the calculation time. The core evolution referred to ends when the equilibrium core condition is reached. Additionally, a calculation method to be employed in the plant in case of incore detector failures, is proposed. (Author) [es

Three-dimensional forward solver and its performance analysis for magnetic resonance electrical impedance tomography (MREIT) using recessed electrodes

International Nuclear Information System (INIS)

Lee, Byung Il; Oh, Suk Hoon; Woo, Eung Je; Lee, Soo Yeol; Cho, Min Hyoung; Kwon, Ohin; Seo, Jin Keun; Lee, June-Yub; Baek, Woon Sik

2003-01-01

In magnetic resonance electrical impedance tomography (MREIT), we try to reconstruct a cross-sectional resistivity (or conductivity) image of a subject. When we inject a current through surface electrodes, it generates a magnetic field. Using a magnetic resonance imaging (MRI) scanner, we can obtain the induced magnetic flux density from MR phase images of the subject. We use recessed electrodes to avoid undesirable artefacts near electrodes in measuring magnetic flux densities. An MREIT image reconstruction algorithm produces cross-sectional resistivity images utilizing the measured internal magnetic flux density in addition to boundary voltage data. In order to develop such an image reconstruction algorithm, we need a three-dimensional forward solver. Given injection currents as boundary conditions, the forward solver described in this paper computes voltage and current density distributions using the finite element method (FEM). Then, it calculates the magnetic flux density within the subject using the Biot-Savart law and FEM. The performance of the forward solver is analysed and found to be enough for use in MREIT for resistivity image reconstructions and also experimental designs and validations. The forward solver may find other applications where one needs to compute voltage, current density and magnetic flux density distributions all within a volume conductor

A Practical Algorithm for Reconstructing Level-1 Phylogenetic Networks

NARCIS (Netherlands)

K.T. Huber; L.J.J. van Iersel (Leo); S.M. Kelk (Steven); R. Suchecki

2010-01-01

htmlabstractRecently much attention has been devoted to the construction of phylogenetic networks which generalize phylogenetic trees in order to accommodate complex evolutionary processes. Here we present an efficient, practical algorithm for reconstructing level-1 phylogenetic networks - a type of

A practical algorithm for reconstructing level-1 phylogenetic networks

NARCIS (Netherlands)

Huber, K.T.; Iersel, van L.J.J.; Kelk, S.M.; Suchecki, R.

2011-01-01

Recently, much attention has been devoted to the construction of phylogenetic networks which generalize phylogenetic trees in order to accommodate complex evolutionary processes. Here, we present an efficient, practical algorithm for reconstructing level-1 phylogenetic networks-a type of network

Multicenter evaluation of quality of life and patient satisfaction after breast reconstruction, a long-term retrospective study.

Science.gov (United States)

Ménez, T; Michot, A; Tamburino, S; Weigert, R; Pinsolle, V

2018-04-01

Breast reconstruction techniques are multiple and they should be chosen in order to improve women's satisfaction and well-being, thus obtaining a personalized treatment. This report's major purpose was to study, through the Breast-Q questionnaire, how the functional and aesthetic outcomes, as well as the complications, of the main autologous breast reconstruction techniques, can affect patients quality of life and well-being at long-term. The secondary purpose was to analyse, thus to identify, the independent factors characterizing the different reconstructive techniques, which may affect patients' satisfaction. Women who underwent autologous breast reconstruction through deep inferior epigastric artery perforator or Latissimus dorsi muscle flap from May 2006 to May 2013 were included. The assessment was based on the Breast-Q reconstruction questionnaire. All times of post-mastectomy reconstruction were concerned: immediate, delayed, after previous procedure failure or conversion to another reconstructive technique due to the patient's dissatisfaction. A total of 98 patients were included. Concerning patients satisfaction, the breast-Q score is highest in patients who underwent immediate breast reconstruction, while scores after delayed breast reconstruction, previous surgery failure or conversion to another technique are generally equivalent. Higher scores have been observed in patients who underwent reconstruction through autologous Latissimus dorsi compared to Latissimus dorsi with prosthetic implant reconstruction. The authors identified factors of higher patients' satisfaction, like absence of major complication and advanced patient's age, in order to personalize the surgical planning according to the patient's priorities. Copyright © 2017 Elsevier Masson SAS. All rights reserved.

Surface reconstruction, figure-ground modulation, and border-ownership.

Science.gov (United States)

Jeurissen, Danique; Self, Matthew W; Roelfsema, Pieter R

2013-01-01

The Differentiation-Integration for Surface Completion (DISC) model aims to explain the reconstruction of visual surfaces. We find the model a valuable contribution to our understanding of figure-ground organization. We point out that, next to border-ownership, neurons in visual cortex code whether surface elements belong to a figure or the background and that this is influenced by attention. We furthermore suggest that there must be strong links between object recognition and figure-ground assignment in order to resolve the status of interior contours. Incorporation of these factors in neurocomputational models will further improve our understanding of surface reconstruction, figure-ground organization, and border-ownership.

Penile surgery and reconstruction.

Science.gov (United States)

Perovic, Sava V; Djordjevic, Miroslav L J; Kekic, Zoran K; Djakovic, Nenad G

2002-05-01

This review will highlight recent advances in the field of penile reconstructive surgery in the paediatric and adult population. It is based on the work published during the year 2001. Besides the anatomical and histological studies of the penis, major contributions have been described in congenital and acquired penile anomalies. Also, a few new techniques and modifications of old procedures are described in order to improve the final functional and aesthetic outcome. The techniques for penile enlargement present a trend in the new millennium, but are still at the stage of investigation.

Magnetic-flux pump

Science.gov (United States)

Hildebrandt, A. F.; Elleman, D. D.; Whitmore, F. C. (Inventor)

1966-01-01

A magnetic flux pump is described for increasing the intensity of a magnetic field by transferring flux from one location to the magnetic field. The device includes a pair of communicating cavities formed in a block of superconducting material, and a piston for displacing the trapped magnetic flux into the secondary cavity producing a field having an intense flux density.

Critical Doping for the Onset of Fermi-Surface Reconstruction by Charge-Density-Wave Order in the Cuprate Superconductor La_{2-x}Sr_{x}CuO_{4}

Directory of Open Access Journals (Sweden)

S. Badoux

2016-04-01

Full Text Available The Seebeck coefficient S of the cuprate superconductor La_{2-x}Sr_{x}CuO_{4} (LSCO was measured in magnetic fields large enough to access the normal state at low temperatures, for a range of Sr concentrations from x=0.07 to x=0.15. For x=0.11, 0.12, 0.125, and 0.13, S/T decreases upon cooling to become negative at low temperatures. The same behavior is observed in the Hall coefficient R_{H}(T. In analogy with other hole-doped cuprates at similar hole concentrations p, the negative S and R_{H} show that the Fermi surface of LSCO undergoes a reconstruction caused by the onset of charge-density-wave modulations. Such modulations have indeed been detected in LSCO by x-ray diffraction in precisely the same doping range. Our data show that in LSCO this Fermi-surface reconstruction is confined to 0.085order ends at a critical doping p_{CDW}=0.15±0.005, well below the pseudogap critical doping p^{⋆}≃0.19.

Quantitative analysis of emphysema and airway measurements according to iterative reconstruction algorithms: comparison of filtered back projection, adaptive statistical iterative reconstruction and model-based iterative reconstruction

International Nuclear Information System (INIS)

Choo, Ji Yung; Goo, Jin Mo; Park, Chang Min; Park, Sang Joon; Lee, Chang Hyun; Shim, Mi-Suk

2014-01-01

To evaluate filtered back projection (FBP) and two iterative reconstruction (IR) algorithms and their effects on the quantitative analysis of lung parenchyma and airway measurements on computed tomography (CT) images. Low-dose chest CT obtained in 281 adult patients were reconstructed using three algorithms: FBP, adaptive statistical IR (ASIR) and model-based IR (MBIR). Measurements of each dataset were compared: total lung volume, emphysema index (EI), airway measurements of the lumen and wall area as well as average wall thickness. Accuracy of airway measurements of each algorithm was also evaluated using an airway phantom. EI using a threshold of -950 HU was significantly different among the three algorithms in decreasing order of FBP (2.30 %), ASIR (1.49 %) and MBIR (1.20 %) (P < 0.01). Wall thickness was also significantly different among the three algorithms with FBP (2.09 mm) demonstrating thicker walls than ASIR (2.00 mm) and MBIR (1.88 mm) (P < 0.01). Airway phantom analysis revealed that MBIR showed the most accurate value for airway measurements. The three algorithms presented different EIs and wall thicknesses, decreasing in the order of FBP, ASIR and MBIR. Thus, care should be taken in selecting the appropriate IR algorithm on quantitative analysis of the lung. (orig.)

Quantitative analysis of emphysema and airway measurements according to iterative reconstruction algorithms: comparison of filtered back projection, adaptive statistical iterative reconstruction and model-based iterative reconstruction

Energy Technology Data Exchange (ETDEWEB)

Choo, Ji Yung [Seoul National University Medical Research Center, Department of Radiology, Seoul National University College of Medicine, and Institute of Radiation Medicine, Seoul (Korea, Republic of); Korea University Ansan Hospital, Ansan-si, Department of Radiology, Gyeonggi-do (Korea, Republic of); Goo, Jin Mo; Park, Chang Min; Park, Sang Joon [Seoul National University Medical Research Center, Department of Radiology, Seoul National University College of Medicine, and Institute of Radiation Medicine, Seoul (Korea, Republic of); Seoul National University, Cancer Research Institute, Seoul (Korea, Republic of); Lee, Chang Hyun; Shim, Mi-Suk [Seoul National University Medical Research Center, Department of Radiology, Seoul National University College of Medicine, and Institute of Radiation Medicine, Seoul (Korea, Republic of)

2014-04-15

To evaluate filtered back projection (FBP) and two iterative reconstruction (IR) algorithms and their effects on the quantitative analysis of lung parenchyma and airway measurements on computed tomography (CT) images. Low-dose chest CT obtained in 281 adult patients were reconstructed using three algorithms: FBP, adaptive statistical IR (ASIR) and model-based IR (MBIR). Measurements of each dataset were compared: total lung volume, emphysema index (EI), airway measurements of the lumen and wall area as well as average wall thickness. Accuracy of airway measurements of each algorithm was also evaluated using an airway phantom. EI using a threshold of -950 HU was significantly different among the three algorithms in decreasing order of FBP (2.30 %), ASIR (1.49 %) and MBIR (1.20 %) (P < 0.01). Wall thickness was also significantly different among the three algorithms with FBP (2.09 mm) demonstrating thicker walls than ASIR (2.00 mm) and MBIR (1.88 mm) (P < 0.01). Airway phantom analysis revealed that MBIR showed the most accurate value for airway measurements. The three algorithms presented different EIs and wall thicknesses, decreasing in the order of FBP, ASIR and MBIR. Thus, care should be taken in selecting the appropriate IR algorithm on quantitative analysis of the lung. (orig.)

Reconstruction of oncologic defects of the eyelid, lips and ear

Directory of Open Access Journals (Sweden)

Gill Paul

2007-12-01

Full Text Available Non melanomatous skin cancers constitute a major part of the cancers that occur in the face, especially in the darker skinned people. Surgical excision stays as the main modality of treatment in these giving very good cure rates. The major drawback of surgery is the resultant functional and esthetic deformity, which has been considerably reduced with proper application of reconstructive surgery principles. In order to achieve good outcome attention has to be given to understand the anatomy as well as tissue requirement at specific areas of the face. There is a great variation in the reconstructive methods in the different sites. This article reviews briefly the anatomy and methods of reconstruction available for the post cancer excisions involving the lips, eyelids and the auricle.

Breast reconstruction after mastectomy

Directory of Open Access Journals (Sweden)

Daniel eSchmauss

2016-01-01

Full Text Available Breast cancer is the leading cause of cancer death in women worldwide. Its surgical approach has become less and less mutilating in the last decades. However, the overall number of breast reconstructions has significantly increased lately. Nowadays breast reconstruction should be individualized at its best, first of all taking into consideration oncological aspects of the tumor, neo-/adjuvant treatment and genetic predisposition, but also its timing (immediate versus delayed breast reconstruction, as well as the patient’s condition and wish. This article gives an overview over the various possibilities of breast reconstruction, including implant- and expander-based reconstruction, flap-based reconstruction (vascularized autologous tissue, the combination of implant and flap, reconstruction using non-vascularized autologous fat, as well as refinement surgery after breast reconstruction.

On the analytical solution of the SN equation in a rectangle assuming an exponential exiting angular flux boundary

International Nuclear Information System (INIS)

Goncalez, Tifani T.; Segatto, Cynthia F.; Vilhena, Marco Tullio

2011-01-01

In this work, we report an analytical solution for the set of S N equations for the angular flux, in a rectangle, using the double Laplace transform technique. Its main idea comprehends the steps: application of the Laplace transform in one space variable, solution of the resulting equation by the LTS N method and reconstruction of the double Laplace transformed angular flux using the inversion theorem of the Laplace transform. We must emphasize that we perform the Laplace inversion by the LTS N method in the x direction, meanwhile we evaluate the inversion in the y direction performing the calculation of the corresponding line integral solution by the Stefest method. We have also to figure out that the application of Laplace transform to this type of boundary value problem introduces additional unknown functions associated to the partial derivatives of the angular flux at boundary. Based on the good results attained by the nodal LTS N method, we assume that the angular flux at boundary is also approximated by an exponential function. By analytical we mean that no approximation is done along the solution derivation except for the exponential hypothesis for the exiting angular flux at boundary. For sake of completeness, we report numerical comparisons of the obtained results against the ones of the literature. (author)

Breast reconstruction - implants

Science.gov (United States)

Breast implants surgery; Mastectomy - breast reconstruction with implants; Breast cancer - breast reconstruction with implants ... harder to find a tumor if your breast cancer comes back. Getting breast implants does not take as long as breast reconstruction ...

An improved muon reconstruction algorithm for INO-ICAL experiment

International Nuclear Information System (INIS)

Bhattacharya, Kolahal; MandaI, Naba K.

2013-01-01

The charge current interaction of neutrino in INO-ICAL detector will be identified with a muon (μ ± ) in the detector whose kinematics is related with the kinematics of the neutrino. So, muon reconstruction is a very important step in achieving INO physics goals. The existing muon reconstruction package for INO-ICAL has poor performance in specific regimes of experimental interest: (a) for larger zenith angle (θ > 50°), (b) for lower energies (E < 1 GeV); mainly due to poor error propagation scheme insensitive to energy E, angle (θ, φ) and inhomogeneous magnetic field along the muon track. Since, a significant fraction of muons from atmospheric neutrino interactions will have initial energy < 1 GeV and almost uniform distribution in cosθ a robust package for muon reconstruction is essential. We have implemented higher order correction terms in the propagation of the state and error covariance matrices of the Kalman Iter. The algorithm ensures track element merging in most cases and also increases reconstruction efficiency. The performance of this package will be presented in comparison with the previous one. (author)

An approach to reconstruction of a natural crack using signals of eddy current testing. 1. Reconstruction of an idealized natural crack

International Nuclear Information System (INIS)

Chen, Zhenmao

1998-12-01

In this paper, an approach to the reconstruction of an idealized natural crack of non-vanishing conductivity is proposed with use of signals of eddy current testing. Two numerical models are introduced at first for modeling a Stress Corrosion Crack (SCC) in order it possibly to be represented by a set of crack parameters. A method for rapid prediction of the eddy current testing signals arisen from these idealized cracks is given then by extending a knowledge based fast forward solver developed by authors to the case of a non-vanishing conductivity. On the other hand, the inverse algorithm of conjugate gradient method is improved to reconstruct the crack parameters and is implemented with the pick-up signals and gradients calculated by using the rapid forward solver. Several examples are presented finally for validating the proposed strategy. The results verified that both of the models can give reasonable reconstruction results in case of a low noise level. The model concerning the touch of crack surfaces with a conducting band region surrounded by the crack edge, however, is proved more efficient that the model using a conductivity distribution from the point of view of both reconstruction speed and accuracy. (author)

Intra nodal reconstruction of the numerical solution generated by the spectro nodal constant for Sn problems of eigenvalues in two-dimensional rectangular geometry

International Nuclear Information System (INIS)

Menezes, Welton Alves de

2009-01-01

In this dissertation the spectral nodal method SD-SGF-CN, cf. spectral diamond - spectral Green's function - constant nodal, is used to determine the angular fluxes averaged along the edges of the homogenized nodes in heterogeneous domains. Using these results, we developed an algorithm for the reconstruction of the node-edge average angular fluxes within the nodes of the spatial grid set up on the domain, since more localized numerical solutions are not generated by coarse-mesh numerical methods. Numerical results are presented to illustrate the accuracy of the algorithm we offer. (author)

First Gridded Spatial Field Reconstructions of Snow from Tree Rings

Science.gov (United States)

Coulthard, B. L.; Anchukaitis, K. J.; Pederson, G. T.; Alder, J. R.; Hostetler, S. W.; Gray, S. T.

2017-12-01

Western North America's mountain snowpacks provide critical water resources for human populations and ecosystems. Warmer temperatures and changing precipitation patterns will increasingly alter the quantity, extent, and persistence of snow in coming decades. A comprehensive understanding of the causes and range of long-term variability in this system is required for forecasting future anomalies, but snowpack observations are limited and sparse. While individual tree ring-based annual snowpack reconstructions have been developed for specific regions and mountain ranges, we present here the first collection of spatially-explicit gridded field reconstructions of seasonal snowpack within the American Rocky Mountains. Capitalizing on a new western North American snow-sensitive network of over 700 tree-ring chronologies, as well as recent advances in PRISM-based snow modeling, our gridded reconstructions offer a full space-time characterization of snow and associated water resource fluctuations over several centuries. The quality of reconstructions is evaluated against existing observations, proxy-records, and an independently-developed first-order monthly snow model.

Volume reconstruction optimization for tomo-PIV algorithms applied to experimental data