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Sample records for fluorescence spectroscopic analysis

  1. Spectroscopic Analysis of Today's Compact Fluorescent Light Bulbs

    Science.gov (United States)

    Pluhar, Edward

    2012-03-01

    In today's consumer market, there are many different light bulbs that claim to produce `natural' light. In my research, I both quantitatively and qualitatively analyzed this claim. First, utilizing a spectroscope, I compared the spectra emitted by different brands and types of compact fluorescent light (CFL) bulbs to the spectra emitted by the Sun. Once the bulbs were quantitatively analyzed, I proceeded to qualitatively analyze them by exposing subjects to the different bulbs. The subjects were asked to rate the quality of color in different pictures illuminated by each type of CFL. From these tests, I was able to determine the ``best'' CFL bulbs, and conclude whether the health risks associated with CFL bulbs outweigh the cost savings, longevity of the bulbs, and/or quality of light benefits.

  2. Multifunctional optofluidic lab-on-chip platform for Raman and fluorescence spectroscopic microfluidic analysis.

    Science.gov (United States)

    Persichetti, G; Grimaldi, I A; Testa, G; Bernini, R

    2017-07-25

    A multifunctional lab-on-a-chip platform for spectroscopic analysis of liquid samples based on an optofluidic jet waveguide is reported. The optofluidic detection scheme is achieved through the total internal reflection arising in a liquid jet of only 150 μm diameter, leading to highly efficient signal excitation and collection. This results in an optofluidic chip with an alignment-free spectroscopic detection scheme, which avoids any background from the sample container. This platform has been designed for multiwavelength fluorescence and Raman spectroscopy. The chip integrates a recirculation system that reduces the required sample volume. The evaluation of the device performance has been accomplished by means of fluorescence measurements performed on eosin Y in water solutions, achieving a limit of detection of 33 pM. The sensor has been applied in Raman spectroscopy of water-ethanol solutions, leading to a limit of detection of 0.18%. As additional application, analysis of riboflavin using fluorescence detection demonstrates the possibility of detecting this vitamin at the 560 pM level (0.21 ng l -1 ). Although measurements have been performed by means of a compact and low-cost spectrometer, in both cases the micro-jet optofluidic chip achieved similar performances if not better than high-end benchtop based laboratory equipment. This approach paves the way towards portable lab-on-a-chip devices for high sensitivity environmental and biochemical sensing, using optical spectroscopy.

  3. Interaction of tea polyphenols with serum albumins: A fluorescence spectroscopic analysis

    International Nuclear Information System (INIS)

    Bose, Adity

    2016-01-01

    Interactions of some tea polyphenols, namely (−) Catechin (C), (−)-epicatechin (EC), (–) epicatechin-3-gallate (ECG), (−)-epigallocatechin (EGC) and (−)-epigallocatechin-3-gallate (EGCG) are outlined with the serum albumin proteins. These interactions had all resulted in binding with the proteins with a concomitant static quenching of the protein fluorescence. A fluorescence technique has been considered as the tool to comprehend the polyphenol–protein interactions mainly and simultaneously other spectroscopic techniques used to verify the results have been discussed. In this mini review the different types of equations usually employed to calculate the binding constant values have been outlined, namely, modified Stern Volmer plot, Scatchard plot and Lineweaver Burk equation, with their corresponding results. The n values (number of binding sites) had always been close to unity suggesting a 1:1 complexation with the polyphenols and the protein. A structural change in the polyphenols has been found to alter the binding constant value and the galloyl moiety attached to the C ring of the polyphenols have been found to play a crucial role in this regard. It has been found that an increase in galloyl moiety increases binding of the catechins with proteins. - Highlights: • Review on interactions of some tea polyphenols with the serum albumin proteins. • Tea polyphenols include Catechin, epigallocatechin-3-gallate, epigallocatechin, epicatechin-3-gallate and epicatechin. • Fluorescence spectroscopic technique is mainly outlined. • Binding constant studies have been given importance. • Galloyl moiety in the C ring is crucial in increasing binding constant.

  4. Analysis of single-molecule fluorescence spectroscopic data with a Markov-modulated Poisson process.

    Science.gov (United States)

    Jäger, Mark; Kiel, Alexander; Herten, Dirk-Peter; Hamprecht, Fred A

    2009-10-05

    We present a photon-by-photon analysis framework for the evaluation of data from single-molecule fluorescence spectroscopy (SMFS) experiments using a Markov-modulated Poisson process (MMPP). A MMPP combines a discrete (and hidden) Markov process with an additional Poisson process reflecting the observation of individual photons. The algorithmic framework is used to automatically analyze the dynamics of the complex formation and dissociation of Cu2+ ions with the bidentate ligand 2,2'-bipyridine-4,4'dicarboxylic acid in aqueous media. The process of association and dissociation of Cu2+ ions is monitored with SMFS. The dcbpy-DNA conjugate can exist in two or more distinct states which influence the photon emission rates. The advantage of a photon-by-photon analysis is that no information is lost in preprocessing steps. Different model complexities are investigated in order to best describe the recorded data and to determine transition rates on a photon-by-photon basis. The main strength of the method is that it allows to detect intermittent phenomena which are masked by binning and that are difficult to find using correlation techniques when they are short-lived.

  5. Spectroscopic analysis and control

    Energy Technology Data Exchange (ETDEWEB)

    Tate; , James D.; Reed, Christopher J.; Domke, Christopher H.; Le, Linh; Seasholtz, Mary Beth; Weber, Andy; Lipp, Charles

    2017-04-18

    Apparatus for spectroscopic analysis which includes a tunable diode laser spectrometer having a digital output signal and a digital computer for receiving the digital output signal from the spectrometer, the digital computer programmed to process the digital output signal using a multivariate regression algorithm. In addition, a spectroscopic method of analysis using such apparatus. Finally, a method for controlling an ethylene cracker hydrogenator.

  6. Spectroscopic Analysis of Red Fluorescent Proteins and Development of a Microfluidic Cell Sorter for the Generation of Improved Variants

    Science.gov (United States)

    Lubbeck, Jennifer L.

    The discovery of the green fluorescent protein (GFP) launched the development of a wide variety of fluorescent protein (FP) mutants whose spectral and photophysical diversity revolutionized in vivo imaging. The excitation and emission spectra of red fluorescent proteins (RFPs), in particular, have been ideally tuned to a window optically favorable for in vivo work. However, their quantum yields, photostabilities and fluorescence intermittency properties require improvement if they are to be broadly employed for low-copy or single-molecule measurements. Attempts to engineer improved RFPs often result in optimization of one photophysical property at the expense of others. We developed a microfluidic-based cytometer for screening HeLa cell-based genetic RFP-libraries simultaneously on the basis of fluorescence lifetime (a proxy for quantum yield), photostability, and brightness. Ten 532 nm excitation beams interrogate each cell in flow. The first is electro-optically modulated (30 MHz) to enable lifetime measurement with phase fluorimetry. The remaining beams act as a pulse sequence for isolating the irreversible photobleaching time constant. Optical-force switching is employed to sort cells based on any combination of the photophysical parameters. Screening with this instrument enables identification of regions of the structure that synergistically affect quantum yield and photostability and the sorting capability provides a new tool for accelerating the development of next generation RFPs.

  7. X-ray fluorescence spectroscopic determination of heavy metals and ...

    African Journals Online (AJOL)

    X-ray fluorescence spectroscopic determination of heavy metals and trace elements in aerial parts of Origanum sipyleum L from Turkey. ... Among other constituents, arsenic, lead and uranium levels were < 1, 2.1 and < 3 ppm, respectively, in the powdered material while in the aqueous extract, the levels were < 1, < 2 and ...

  8. Spectroscopic characterization of novel fluorescent lipid membrane probes

    International Nuclear Information System (INIS)

    Knapp, M.

    2001-11-01

    The aim of this thesis was the spectroscopic characterization of new, so far not described fluorescence markers which incorporate into ordered systems and provide information about their structure, the phase transition and aggregation. Bianthryl, Anthracen and Coumarin 6 were incorporated into liposomes formed from Lecithine, DMPC or DPPC as well as β-Cyclodextrin. The systems were characterized by means of classical-spectroscopic methods, laser-induced fluorescence and fluorescence correlation spectroscopy (FCS). Because of the prospective phyto-physical characteristics of bianthryl, i.e. the formation of a charge-separated electronic exited state this probe is particularly suitable to detect small changes of micro viscosity and local polarity of liposomes. Due to three clearly separated fluorescence lifetimes of the excited singlet state, measured for Bianthryl, three specific sites of this molecule within the phospholipid membrane were proven. Coumarin 6 incorporates likewise very well in Liposomes. The thermotrope phase transition at temperature 24,5 o C is well provable by the change of the anisotropy of fluorescence of this laser dye. By time-resolved anisotropy measurements the dynamics (rotation) was proven with high sensitivity. The thermotropic phase transition of DMPC Liposomes was detected by means of fluorescence reasonance energy transfer (FRET). A specific method for the determination of fluorescence quantum yields in strongly scattering solutions was suggested on the basis of FRET using Anthracen as energy donor and coumarin 6 as energy acceptor. For the energy transfer of Anthracen to Coumarin 6 in the gel phase of the DMPC liposomes as substantial proportion of static transfer was found. The presence of correlated donor-acceptor pairs was proven by the comparison of stationary and time-resolved fluorescence. Further more, concentration- and temperature dependent formation was found of anthracene dimers. Such dimers are formed in the gel phase of

  9. Fluorescence detection: SPIE volume 743

    International Nuclear Information System (INIS)

    Menzel, E.R.

    1987-01-01

    This book contains proceedings arranged into four sessions. They are: Fluorescence spectroscopic techniques; Fluorescence in analysis and materials characterization; Fluorescence in medicine and biochemistry; and Fluorescence in criminalistics

  10. Fluorescence detection: SPIE volume 743

    Energy Technology Data Exchange (ETDEWEB)

    Menzel, E.R.

    1987-01-01

    This book contains proceedings arranged into four sessions. They are: Fluorescence spectroscopic techniques; Fluorescence in analysis and materials characterization; Fluorescence in medicine and biochemistry; and Fluorescence in criminalistics.

  11. Spectroscopic Chemical Analysis Methods and Apparatus

    Science.gov (United States)

    Hug, William F. (Inventor); Reid, Ray D. (Inventor); Bhartia, Rohit (Inventor); Lane, Arthur L. (Inventor)

    2017-01-01

    Spectroscopic chemical analysis methods and apparatus are disclosed which employ deep ultraviolet (e.g. in the 200 nm to 300 nm spectral range) electron beam pumped wide bandgap semiconductor lasers, incoherent wide bandgap semiconductor light emitting devices, and hollow cathode metal ion lasers to perform non-contact, non-invasive detection of unknown chemical analytes. These deep ultraviolet sources enable dramatic size, weight and power consumption reductions of chemical analysis instruments. In some embodiments, Raman spectroscopic detection methods and apparatus use ultra-narrow-band angle tuning filters, acousto-optic tuning filters, and temperature tuned filters to enable ultra-miniature analyzers for chemical identification. In some embodiments Raman analysis is conducted along with photoluminescence spectroscopy (i.e. fluorescence and/or phosphorescence spectroscopy) to provide high levels of sensitivity and specificity in the same instrument.

  12. Spectroscopic detection of fluorescent protein marker gene activity in genetically modified plants

    Science.gov (United States)

    Liew, O. W.; Chong, Jenny P. C.; Asundi, Anand K.

    2005-04-01

    This work focuses on developing a portable fibre optic fluorescence analyser for rapid identification of genetically modified plants tagged with a fluorescent marker gene. Independent transgenic tobacco plant lines expressing the enhanced green fluorescence protein (EGFP) gene were regenerated following Agrobacterium-mediated gene transfer. Molecular characterisation of these plant lines was carried out at the DNA level by PCR screening to confirm their transgenic status. Conventional transgene expression analysis was then carried out at the RNA level by RT-PCR and at the protein level by Western blotting using anti-GFP rabbit antiserum. The amount of plant-expressed EGFP on a Western blot was quantified against known amounts of purified EGFP by scanning densitometry. The expression level of EGFP in transformed plants was found to range from 0.1 - 0.6% of total extractable protein. A comparison between conventional western analysis of transformants and direct spectroscopic quantification using the fibre optic fluorescence analyser was made. The results showed that spectroscopic measurements of fluorescence emission from strong EGFP expressors correlated positively with Western blot data. However, the fluorescence analyser was also able to identify weakly expressing plant transformants below the detection limit of colorimetric Western blotting.

  13. UV-fluorescence spectroscopic technique in the diagnosis of breast, ovarian, uterus, and cervix cancer

    Science.gov (United States)

    Das, Bidyut B.; Glassman, Wenling S.; Alfano, Robert R.; Cleary, Joseph; Prudente, R.; Celmer, Edward J.; Lubicz, Stephanie

    1991-06-01

    Malignant breast tumors can be separated from benign and normal tissues using uv-fluorescence spectroscopic technique. Using the same method one can also distinguish cancerous tissues from noncancerous ones in case of cervix, uterus and ovary.

  14. Spectroscopic analysis of optoelectronic semiconductors

    CERN Document Server

    Jimenez, Juan

    2016-01-01

    This book deals with standard spectroscopic techniques which can be used to analyze semiconductor samples or devices, in both, bulk, micrometer and submicrometer scale. The book aims helping experimental physicists and engineers to choose the right analytical spectroscopic technique in order to get specific information about their specific demands. For this purpose, the techniques including technical details such as apparatus and probed sample region are described. More important, also the expected outcome from experiments is provided. This involves also the link to theory, that is not subject of this book, and the link to current experimental results in the literature which are presented in a review-like style. Many special spectroscopic techniques are introduced and their relationship to the standard techniques is revealed. Thus the book works also as a type of guide or reference book for people researching in optical spectroscopy of semiconductors.

  15. Fluorescence spectroscopic studies on binding of a flavonoid ...

    Indian Academy of Sciences (India)

    Binding of quercetin to human serum albumin (HSA) was studied and the binding constant measured by following the red-shifted absorption spectrum of quercetin in the presence of HSA and the quenching of the intrinsic protein fluorescence in the presence of different concentrations of quercetin. Fluorescence lifetime ...

  16. Fluorescent-Spectroscopic Research of in Vivo Tissues Pathological Conditions

    Science.gov (United States)

    Giraev, K. M.; Ashurbekov, N. A.; Medzhidov, R. T.

    The steady-state spectra of autofluorescence and the reflection coefficient on the excitation wavelength of some stomach tissues in vivo with various pathological conditions (surface gastritis, displasia, cancer) are measured under excitation by the nitrogen laser irradiation (λex=337.1 nm). The contour expansion of obtained fluorescence spectra into contributions of components is conducted by the Gaussian-Lorentzian curves method. It is shown that at least 7 groups of fluorophores forming a total luminescence spectrum can be distinguished during the development of displasia and tumor processes. The correlation of intensities of flavins and NAD(P)·H fluorescence is determined and the degree of respiratory activity of cells for the functional condition considered is estimated. The evaluations of the fluorescence quantum yield of the tissue's researched are given.

  17. The interaction of new piroxicam analogues with lipid bilayers--a calorimetric and fluorescence spectroscopic study.

    Science.gov (United States)

    Maniewska, Jadwiga; Szczęśniak-Sięga, Berenika; Poła, Andrzej; Sroda-Pomianek, Kamila; Malinka, Wiesław; Michalak, Krystyna

    2014-01-01

    The purpose of the present paper was to assess the ability of new piroxicam analogues to interact with the lipid bilayers. The results of calorimetric and fluorescence spectroscopic experiments of two new synthesized analogues of piroxicam, named PR17 and PR18 on the phase behavior of phospholipid bilayers and fluorescence quenching of fluorescent probes (Laurdan and Prodan), which molecular location within membranes is known with certainty, are shown in present work. The presented results revealed that, depending on the details of chemical structure, the studied compounds penetrated the lipid bilayers.

  18. Assessing the blinking state of fluorescent quantum dots in free solution by combining fluorescence correlation spectroscopy with ensemble spectroscopic methods.

    Science.gov (United States)

    Dong, Chaoqing; Liu, Heng; Ren, Jicun

    2014-11-04

    The current method for investigating the blinking behavior is to immobilize quantum dots (QDs) in the matrix and then apply a fluorescent technique to monitor the fluorescent trajectories of individual QDs. So far, no method can be used to directly assess the blinking state of ensemble QDs in free solution. In this study, a new method was described to characterize the blinking state of the QDs in free solution by combining single molecule fluorescence correlation spectroscopy (FCS) with ensemble spectroscopic methods. Its principle is based on the observation that the apparent concentration of bright QDs obtained by FCS is less than its actual concentration measured by ensemble spectroscopic method due to the QDs blinking. We proposed a blinking index (Kblink) for characterizing the blinking state of QDs, and Kblink is defined as the ratio of the actual concentration (Cb,actual) measured by the ensemble spectroscopic method to the apparent concentration (Cb,app) of QDs obtained by FCS. The effects of certain factors such as laser intensity, growth process, and ligands on blinking of QDs were investigated. The Kblink data of QDs obtained were successfully used to characterize the blinking state of QDs and explain certain experimental results.

  19. Spectroscopic Monitoring of Proton Transfer in Green Fluorescent Protein

    Science.gov (United States)

    Sage, J. Timothy; O'Brien, Mannis; Salna, Bridget; Abdelkrim, Benabbas; Champion, Paul M.; van Thor, Jasper

    2014-03-01

    Vibrational spectroscopy is an ideal probe for proton transfer in biological molecules because of its sensitivity to the motion of protons, which are difficult to track with more direct structural methods such as X-ray crystallography. Previous time-resolved infrared measurements provided direct experimental evidence for Glu 222 as the excited state proton acceptor following excitation of green fluorescent protein (GFP). Here, we use infrared cryospectroscopy to characterize a low quantum yield photochemical channel that leads to decarboxylation of Glu 222 coupled with proton transfer to complete the methyl group on the resulting α-aminobutyric acid residue. The irreversible nature of this process allows us to obtain infrared data at much higher sensitivity and over an extended frequency range. Difference spectra recorded over the full 1000-4000 cm-1 range at 100 K probe perturbations of internal water molecules and nearby amino acids as well as the chromophore. We identify vibrational frequencies that probe hydrogen bonding along the ``proton wire'' that connects the chromophore to Glu 222.

  20. Spectroscopic Methods of Steroid Analysis

    Science.gov (United States)

    Kasal, Alexander; Budesinsky, Milos; Griffiths, William J.

    Modern chemical laboratories contain equipment capable of measuring many of the physical properties of single chemical compounds and mixtures of compounds, particularly their spectral properties, which can, if interpreted correctly, provide valuable information about both structure (of single compounds) and composition (of mixtures). Over the past 50 years, the author have witnessed enormous progress in the technical capabilities of this equipment. Automation and speed of analysis have greatly improved the ease of use and the versatility of the technology.

  1. X-ray fluorescence spectroscopic determination of heavy metals and ...

    African Journals Online (AJOL)

    Mediterranean region. J. Essent. Oil Res 1993; 5(1):. 71–77. 3. Başer KHC, Tümen G, Özek T, Kürkçüoğlu M,. Composition of the essential oil of Origanum sipyleum of. Turkish origin, J Essent Oil Res 1992; 4, 139–142;. 4. Köksal O, Güneş E, Özer OO, Özden M, Analysis of effective factors on information sources at Turkish.

  2. Macromolecular competition titration method accessing thermodynamics of the unmodified macromolecule-ligand interactions through spectroscopic titrations of fluorescent analogs.

    Science.gov (United States)

    Bujalowski, Wlodzimierz; Jezewska, Maria J

    2011-01-01

    Analysis of thermodynamically rigorous binding isotherms provides fundamental information about the energetics of the ligand-macromolecule interactions and often an invaluable insight about the structure of the formed complexes. The Macromolecular Competition Titration (MCT) method enables one to quantitatively obtain interaction parameters of protein-nucleic acid interactions, which may not be available by other methods, particularly for the unmodified long polymer lattices and specific nucleic acid substrates, if the binding is not accompanied by adequate spectroscopic signal changes. The method can be applied using different fluorescent nucleic acids or fluorophores, although the etheno-derivatives of nucleic acid are especially suitable as they are relatively easy to prepare, have significant blue fluorescence, their excitation band lies far from the protein absorption spectrum, and the modification eliminates the possibility of base pairing with other nucleic acids. The MCT method is not limited to the specific size of the reference nucleic acid. Particularly, a simple analysis of the competition titration experiments is described in which the fluorescent, short fragment of nucleic acid, spanning the exact site-size of the protein-nucleic acid complex, and binding with only a 1:1 stoichiometry to the protein, is used as a reference macromolecule. Although the MCT method is predominantly discussed as applied to studying protein-nucleic acid interactions, it can generally be applied to any ligand-macromolecule system by monitoring the association reaction using the spectroscopic signal originating from the reference macromolecule in the presence of the competing macromolecule, whose interaction parameters with the ligand are to be determined. Copyright © 2011 Elsevier Inc. All rights reserved.

  3. Macromolecular Competition Titration Method: Accessing Thermodynamics of the Unmodified Macromolecule–Ligand Interactions Through Spectroscopic Titrations of Fluorescent Analogs

    Science.gov (United States)

    Bujalowski, Wlodzimierz; Jezewska, Maria J.

    2011-01-01

    Analysis of thermodynamically rigorous binding isotherms provides fundamental information about the energetics of the ligand–macromolecule interactions and often an invaluable insight about the structure of the formed complexes. The Macromolecular Competition Titration (MCT) method enables one to quantitatively obtain interaction parameters of protein–nucleic acid interactions, which may not be available by other methods, particularly for the unmodified long polymer lattices and specific nucleic acid substrates, if the binding is not accompanied by adequate spectroscopic signal changes. The method can be applied using different fluorescent nucleic acids or fluorophores, although the etheno-derivatives of nucleic acid are especially suitable as they are relatively easy to prepare, have significant blue fluorescence, their excitation band lies far from the protein absorption spectrum, and the modification eliminates the possibility of base pairing with other nucleic acids. The MCT method is not limited to the specific size of the reference nucleic acid. Particularly, a simple analysis of the competition titration experiments is described in which the fluorescent, short fragment of nucleic acid, spanning the exact site-size of the protein–nucleic acid complex, and binding with only a 1:1 stoichiometry to the protein, is used as a reference macromolecule. Although the MCT method is predominantly discussed as applied to studying protein–nucleic acid interactions, it can generally be applied to any ligand–macromolecule system by monitoring the association reaction using the spectroscopic signal originating from the reference macromolecule in the presence of the competing macromolecule, whose interaction parameters with the ligand are to be determined. PMID:21195223

  4. Spectroscopic parameters of the cuticle and ethanol extracts of the fluorescent cave isopod Mesoniscusgraniger (Isopoda, Oniscidea).

    Science.gov (United States)

    Giurginca, Andrei; Šustr, Vladimír; Tajovský, Karel; Giurginca, Maria; Matei, Iulia

    2015-01-01

    The body surface of the terrestrial isopod Mesoniscusgraniger (Frivaldsky, 1863) showed blue autofluorescence under UV light (330-385 nm), using epifluorescence microscopy and also in living individuals under a UV lamp with excitation light of 365 nm. Some morphological cuticular structures expressed a more intense autofluorescence than other body parts. For this reason, only the cuticle was analyzed. The parameters of autofluorescence were investigated using spectroscopic methods (molecular spectroscopy in infrared, ultraviolet-visible, fluorescence, and X-ray fluorescence spectroscopy) in samples of two subspecies of Mesoniscusgraniger preserved in ethanol. Samples excited by UV light (from 350 to 380 nm) emitted blue light of wavelengths 419, 420, 441, 470 and 505 nm (solid phase) and 420, 435 and 463 (ethanol extract). The results showed that the autofluorescence observed from living individuals may be due to some β-carboline or coumarin derivatives, some crosslinking structures, dityrosine, or due to other compounds showing similar excitation-emission characteristics.

  5. Fluorescence quenching of quantum dots by gold nanoparticles: a potential long range spectroscopic ruler.

    Science.gov (United States)

    Samanta, Anirban; Zhou, Yadong; Zou, Shengli; Yan, Hao; Liu, Yan

    2014-09-10

    The dependence of quantum dot (QD) fluorescence emission on the proximity of 30 nm gold nanoparticles (AuNPs) was studied with controlled interparticle distances ranging from 15 to 70 nm. This was achieved by coassembling DNA-conjugated QDs and AuNPs in a 1:1 ratio at precise positions on a triangular-shaped DNA origami platform. A profound, long-range quenching of the photoluminescence intensity of the QDs was observed. A combination of static and time-resolved fluorescence measurements suggests that the quenching is due to an increase in the nonradiative decay rate of QD emission. Unlike FRET, the energy transfer is inversely proportional to the 2.7th power of the distance between nanoparticles with half quenching at ∼28 nm. This long-range quenching phenomena may be useful for developing extended spectroscopic rulers in the future.

  6. Fluorescence, spectroscopic and NLO properties of green tea extract in deoxyribonucleic acid

    Science.gov (United States)

    Manea, Ana-Maria; Rau, Ileana; Kajzar, Francois; Meghea, Aurelia

    2013-11-01

    Natural, purely biological deoxyribonucleic acid (DNA)-green tea extract (GTE) complexes at different concentrations were prepared and characterized for their spectroscopic, fluorescent, linear and nonlinear optical properties. The complexes can be processed into good optical quality thin films by solution casting. They fluoresce when excited in UV absorption band, with a significantly larger quantum yield for the DNA-GTE complex than for a pure GTE solution. The thin film refractive indices were determined by Fabry-Perot (FP) interference patterns. The third-order nonlinear optical (NLO) properties of thin films were determined by the optical third-harmonic generation technique at 1064.2 nm fundamental wavelength. The phase of THG susceptibility was determined from the concentration variation of THG susceptibility. It reveals presence of a two-photon resonance with a band lying in the optical gap.

  7. Quantum-chemical investigations of spectroscopic properties of a fluorescence probe

    Science.gov (United States)

    Titova, T. Yu.; Morozova, Yu. P.; Zharkova, O. M.; Artyukhov, V. Ya.; Korolev, B. V.

    2012-09-01

    The prodan molecule (6-propionyl-2-dimethylamino naphthalene) - fluorescence probe - is investigated by quantum-chemical methods of intermediate neglect of differential overlap (INDO) and molecular electrostatic potential (MEP). The dipole moments of the ground and excited states, the nature and position of energy levels, the centers of specific solvation, the rate constants of photoprocesses, and the fluorescence quantum yield are estimated. To elucidate the role of the dimethylamino group in the formation of bands and spectral characteristics, the molecule only with the propionyl group (pron) is investigated. The long-wavelength absorption bands of prodan and pron molecules are interpreted. The results obtained for the prodan molecule by the INDO method with original spectroscopic parameterization are compared with the literature data obtained by the DFT/CIS, ZINDO/S, and AM1/CISD methods.

  8. Use of laser fluorescence in dental caries diagnosis: a fluorescence x biomolecular vibrational spectroscopic comparative study.

    Science.gov (United States)

    Carvalho, Fabíola Bastos de; Barbosa, Artur Felipe Santos; Zanin, Fátima Antonia Aparecida; Brugnera Júnior, Aldo; Silveira Júnior, Landulfo; Pinheiro, Antonio Luiz Barbosa

    2013-01-01

    The aim of this work was to verify the existence of correlation between Raman spectroscopy readings of phosphate apatite (~960 cm-1), fluoridated apatite (~575 cm-1) and organic matrix (~1450 cm-1) levels and Diagnodent® readings at different stages of dental caries in extracted human teeth. The mean peak value of fluorescence in the carious area was recorded and teeth were divided in enamel caries, dentin caries and sound dental structure. After fluorescence readings, Raman spectroscopy was carried out on the same sites. The results showed significant difference (ANOVA, pfluorescence readings for enamel (16.4 ± 2.3) and dentin (57.6 ± 23.7) on carious teeth. Raman peaks of enamel and dentin revealed that ~575 and ~960 cm-1 peaks were more intense in enamel caries. There was significant negative correlation (pfluorescence detected by Diagnodent the lower the peaks of phosphate apatite and fluoridated apatite. As the early diagnosis of caries is directly related to the identification of changes in the inorganic tooth components, Raman spectroscopy was more sensitive to variations of these components than Diagnodent.

  9. Dipodal quinoline-tethered fluorescent probe synthesis and investigation of spectroscopic properties

    Science.gov (United States)

    Obalı, Aslıhan Yılmaz; Yilmaz, Menzeher Serkan; Uçan, Halil İsmet

    2017-10-01

    Novel quinoline-tethered fluorescent probe was designed and synthesized as multidentate ligand. Their sensing actions were confirmed by UV-Vis absorbance and emission spectroscopic studies in presence of perchlorate salts of Co2+, Li+, Fe2+, K+, Pb2+, Cu2+, Zn2+, Ni2+, Hg2+, Ag+ cations in acetonitrile (1 × 10-5 M for absorption studies, 1 × 10-7 M for fluorescence studies). It was found that the dipodal compounds can selectively bind to Cu2+ and Ag+ metal ions with a significant quenching in their emissions. The capture of Cu2+ and Ag+ by the probe resulted in deprotonation of the secondary amine conjugated to the quinoline-tethered probe, so that the electron-donation ability of the 'N' atom would be greatly enhanced and the probe (2) showed blue-shift in emission and exhibited an on-off fluorescent response. The binding study was explored by using fluorescence spectroscopy with Job plot method.

  10. Chiral alkylated-aniline as a noninvasive fluorescence sensor: Spectroscopic and molecular modeling studies

    Science.gov (United States)

    Sengupta, Bidisha; Mukherjee, Chirantan Sen; Chakraborty, Sandipan; Muhammad, Maria Jones; Gladney, William; Armstrong, George

    2017-12-01

    Aniline, heterocyclic aromatic amines, and arylamines are known carcinogens. Recently aniline mustard has come into prominence as a novel anticancer agent. In this project, microwave irradiation has been used to synthesize an optically active alkylated aniline namely 2,6-dimethyl-4-(1-(p-tolyl)ethyl)aniline (abbreviated DMPA). The presence of quartet and doublet peaks in NMR and a single chromatogram in HPLC verified that the final product DMPA, prepared from the synthesis reactions, had no major impurities. By using a Lux chiral column in HPLC, two peaks have been detected in the chromatogram, which correspond to two enantiomers of the chiral aniline derivative. Fluorescence spectroscopic measurements on DMPA indicated conspicuous dependence of its emission behavior on the polarity (in terms of the empirical polarity parameter ET(30)) of the homogeneous solvents used, a property important for an optical sensor. The nature of the emission profiles, along with the relevant parameter namely wavelength at emission maximum (λemmax) is used to infer the distribution, binding and microenvironment of the DMPA molecules in human serum albumin protein (HSA). DMPA is weakly fluorescent in aqueous buffer medium, with a dramatic enhancement in the fluorescence emission in the presence of HSA. Molecular modeling studies have been carried out on the two enantiomers (R and S) of DMPA with HSA. The implications of these findings are examined in relation to the potentialities of DMPA as a novel fluorescence sensor for biological systems.

  11. Spectroscopic Analysis of Planetary Host Stars

    Science.gov (United States)

    Rittipruk, P.; Yushchenko, A.; Kang, Y. W.

    2014-08-01

    We observed the high resolution spectra of extra-solar planet host stars. The spectroscopic data of host stars were observed using the CHIRON echelle spectrometer and R-C Spectrograph for magnetic activity on the SMART-1.5 meter telescope at CTIO, Chile. The analysis of spectroscopic data was performed using URAN and SYNTHE programs. These spectra allow us to determine the effective temperatures, surface gravities, microturbulent velocities and, finally, the chemical composition of the hosts was obtained by spectrum synthesis. One of the targets, namely HD 47536, the host of two planets, appeared to be a halo star with overabundances of neutron capture elements. The effective temperature and the surface gravity of this star are 4400 K and log=1.5 respectively, the iron is underabundant by 0.6 dex. The heavy elements (up to thorium, Z=90) show the overabundances with respect to iron. The signs of accretion of interstellar gas are found in the atmosphere of this star.

  12. Micron scale spectroscopic analysis of materials

    International Nuclear Information System (INIS)

    James, David; Finlayson, Trevor; Prawer, Steven

    1991-01-01

    The goal of this proposal is the establishment of a facility which will enable complete micron scale spectroscopic analysis of any sample which can be imaged in the optical microscope. Current applications include studies of carbon fibres, diamond thin films, ceramics (zirconia and high T c superconductors), semiconductors, wood pulp, wool fibres, mineral inclusions, proteins, plant cells, polymers, fluoride glasses, and optical fibres. The range of interests crosses traditional discipline boundaries and augurs well for a truly interdisciplinary collaboration. Developments in instrumentation such as confocal imaging are planned to achieve sub-micron resolution, and advances in computer software and hardware will enable the aforementioned spectroscopies to be used to map molecular and crystalline phases on the surfaces of materials. Coupled with existing compositional microprobes (e.g. the proton microprobe) the possibilities for the development of new, powerful, hybrid imaging technologies appear to be excellent

  13. NIR fluorescence spectroscopic investigations of Er{sup 3+}-ions doped borate based tellurium calcium zinc niobium oxide glasses

    Energy Technology Data Exchange (ETDEWEB)

    Ravi, O. [Department of Instrumentation, Sri Venkateswara University, Tirupati 517502 (India); Dhoble, S.J. [Department of Physics, RTM Nagpur University, Nagpur 440033 (India); Ramesh, B.; Devarajulu, G. [Department of Physics, Sri Venkateswara University, Tirupati 517502 (India); Reddy, C. Madhukar [Department of Physics, AP Model School, Yerravaripalem 517194 (India); Linganna, K. [Department of Physics, Sri Venkateswara University, Tirupati 517502 (India); Reddy, G. Rajasekhar [Department of Instrumentation, Sri Venkateswara University, Tirupati 517502 (India); Raju, B. Deva Prasad, E-mail: drdevaprasadraju@gmail.com [Department of Physics, Sri Venkateswara University, Tirupati 517502 (India); Department of Future Studies, Sri Venkateswara University, Tirupati 517502 (India)

    2015-08-15

    A series of Er{sup 3+} ions doped tellurium calcium zinc niobium borate glasses were prepared by the melt quenching technique. The prepared samples were investigated by optical absorption and near infrared fluorescence spectroscopic studies. The obtained Judd–Ofelt intensity parameters Ω{sub λ} (λ=2, 4 and 6) were determined through experimental and calculated oscillator strengths obtained from absorption spectra and their results are studied and compared with reported literature. The stark-level energies of {sup 4}I{sub 13/2} excited and {sup 4}I{sub 15/2} ground states were evaluated by using both the absorption and emission measurements. The effect of Er{sup 3+} ion concentration on the emission intensity of {sup 4}I{sub 13/2}→{sup 4}I{sub 15/2} transition was discussed. Intense and broad 1.53 µm infrared fluorescence is observed at 980 nm diode laser excitation. Photoluminescence (PL) and its decay behavior studies were carried out for the transition {sup 4}I{sub 13/2}→{sup 4}I{sub 15/2} at 1.53 µm emission. The broad emission together with higher values of the bandwidth (81 nm), stimulated emission cross-section (32.25×10{sup −22} cm{sup 2}) and lifetime (530 µs for 1.0 mol% of Er{sup 3+}) of level {sup 4}I{sub 13/2} make these glasses attractive for broadband amplifiers. From the analysis of spectroscopic data, the present glass is a prospective photonic material for practical applications in the visible and NIR region. - Highlights: • In this study we prepared TCZNB glasses doped with Er{sup 3+} ions. • Glasses are characterized with absorption, emission and lifetime analysis. • Judd–Ofelt theory is used to calculate radiative properties. • TCZNB glasses could be used as NIR lasers.

  14. In vivo spectroscopic photoacoustic tomography imaging of a far red fluorescent protein expressed in the exocrine pancreas of adult zebrafish

    Science.gov (United States)

    Liu, Mengyang; Schmitner, Nicole; Sandrian, Michelle G.; Zabihian, Behrooz; Hermann, Boris; Salvenmoser, Willi; Meyer, Dirk; Drexler, Wolfgang

    2014-03-01

    Fluorescent proteins brought a revolution in life sciences and biological research in that they make a powerful tool for researchers to study not only the structural and morphological information, but also dynamic and functional information in living cells and organisms. While green fluorescent proteins (GFP) have become a common labeling tool, red-shifted or even near infrared fluorescent proteins are becoming the research focus due to the fact that longer excitation wavelengths are more suitable for deep tissue imaging. In this study, E2-Crimson, a far red fluorescent protein whose excitation wavelength is 611 nm, was genetically expressed in the exocrine pancreas of adult zebrafish. Using spectroscopic all optical detection photoacoustic tomography, we mapped the distribution of E2-Crimson in 3D after imaging the transgenic zebrafish in vivo using two different wavelengths. With complementary morphological information provided by imaging the same fish using a spectral domain optical coherence tomography system, the E2-Crimson distribution acquired from spectroscopic photoacoustic tomography was confirmed in 2D by epifluorescence microscopy and in 3D by histology. To the authors' knowledge, this is the first time a far red fluorescent protein is imaged in vivo by spectroscopic photoacoustic tomography. Due to the regeneration feature of zebrafish pancreas, this work preludes the longitudinal studies of animal models of diseases such as pancreatitis by spectroscopic photoacoustic tomography. Since the effective penetration depth of photoacoustic tomography is beyond the transport mean free path length, other E2-Crimson labeled inner organs will also be able to be studied dynamically using spectroscopic photoacoustic tomography.

  15. Dual-wavelength excitation to reduce background fluorescence for fluorescence spectroscopic quantitation of erythrocyte zinc protoporphyrin-IX and protoporphyrin-IX from whole blood and oral mucosa

    Science.gov (United States)

    Hennig, Georg; Vogeser, Michael; Holdt, Lesca M.; Homann, Christian; Großmann, Michael; Stepp, Herbert; Gruber, Christian; Erdogan, Ilknur; Hasmüller, Stephan; Hasbargen, Uwe; Brittenham, Gary M.

    2014-02-01

    Erythrocyte zinc protoporphyrin-IX (ZnPP) and protoporphyrin-IX (PPIX) accumulate in a variety of disorders that restrict or disrupt the biosynthesis of heme, including iron deficiency and various porphyrias. We describe a reagent-free spectroscopic method based on dual-wavelength excitation that can measure simultaneously both ZnPP and PPIX fluorescence from unwashed whole blood while virtually eliminating background fluorescence. We further aim to quantify ZnPP and PPIX non-invasively from the intact oral mucosa using dual-wavelength excitation to reduce the strong tissue background fluorescence while retaining the faint porphyrin fluorescence signal originating from erythrocytes. Fluorescence spectroscopic measurements were made on 35 diluted EDTA blood samples using a custom front-face fluorometer. The difference spectrum between fluorescence at 425 nm and 407 nm excitation effectively eliminated background autofluorescence while retaining the characteristic porphyrin peaks. These peaks were evaluated quantitatively and the results compared to a reference HPLC-kit method. A modified instrument using a single 1000 μm fiber for light delivery and detection was used to record fluorescence spectra from oral mucosa. For blood measurements, the ZnPP and PPIX fluorescence intensities from the difference spectra correlated well with the reference method (ZnPP: Spearman's rho rs = 0.943, p ZnPP/heme and PPIX/heme ratios from unwashed whole blood, simplifying clinical laboratory measurements. The difference technique reduces the background fluorescence from measurements on oral mucosa, allowing for future non-invasive quantitation of erythrocyte ZnPP and PPIX.

  16. Development of ultrasensitive spectroscopic analysis technology

    International Nuclear Information System (INIS)

    Cha, Hyung Ki; Song, K. S.; Kim, D. H.; Yang, K. H.; Jung, E. C.; Jeong, D. Y.; Yi, Y. J.; Lee, S. M.; Hong, K. H.; Han, J. M.; Yoo, B. D.; Rho, S. P.; Yi, J. H.; Park, H. M.; Cha, B. H.; Nam, S. M.; Lee, J. M.

    1997-09-01

    For the development of the laser initiated high resolution, ultra sensitive analysis technology following field of researches have been performed. 1) Laser resonance ionization technology, 2) Laser-induced rare isotope detection technology, 3) Laser-induced plasma analysis technology, 4) Microparticle analysis technology by using ion trap, 5) Laser induced remote sensing technique. As a result a monitoring system for photoionized product is developed and the test of system is performed with Sm sample. The rare isotope detection system is designed and a few key elements of the system are developed. In addition a laser-induced plasma analysis system is developed and samples such as Zircaloy, Zinc-base alloy, rock samples are reasonably analyzed. The detection sensitivity is identified as good as a few ppm order. An ion trap is developed and microparticles such as SiC are trapped inside the trap by ac and dc fields. The fluorescence signals from the organic dyes as well as rare earth element which are absorbed on the microparticles are detected. Several calibration curves are also obtained. In the field of laser remote sensing a mobile Lidar system is designed and several key elements are developed. In addition the developed system is used for the detection of Ozone, NO 2 , SO 2 , etc. (author). 57 refs., 42 figs

  17. Development of ultrasensitive spectroscopic analysis technology

    Energy Technology Data Exchange (ETDEWEB)

    Cha, Hyung Ki; Song, K. S.; Kim, D. H.; Yang, K. H.; Jung, E. C.; Jeong, D. Y.; Yi, Y. J.; Lee, S. M.; Hong, K. H.; Han, J. M.; Yoo, B. D.; Rho, S. P.; Yi, J. H.; Park, H. M.; Cha, B. H.; Nam, S. M.; Lee, J. M.

    1997-09-01

    For the development of the laser initiated high resolution, ultra sensitive analysis technology following field of researches have been performed. (1) Laser resonance ionization technology, (2) Laser-induced rare isotope detection technology, (3) Laser-induced plasma analysis technology, (4) Microparticle analysis technology by using ion trap, (5) Laser induced remote sensing technique. As a result a monitoring system for photoionized product is developed and the test of system is performed with Sm sample. The rare isotope detection system is designed and a few key elements of the system are developed. In addition a laser-induced plasma analysis system is developed and samples such as Zircaloy, Zinc-base alloy, rock samples are reasonably analyzed. The detection sensitivity is identified as good as a few ppm order. An ion trap is developed and microparticles such as SiC are trapped inside the trap by ac and dc fields. The fluorescence signals from the organic dyes as well as rare earth element which are absorbed on the microparticles are detected. Several calibration curves are also obtained. In the field of laser remote sensing a mobile Lidar system is designed and several key elements are developed. In addition the developed system is used for the detection of Ozone, NO{sub 2}, SO{sub 2}, etc. (author). 57 refs., 42 figs.

  18. Synthesis and spectroscopic analysis of Schiff Bases of Imesatin ...

    African Journals Online (AJOL)

    Synthesis and spectroscopic analysis of Schiff Bases of Imesatin and Isatin derivatives. Olubunmi S. Oguntoye, Abdulmumeen A. Hamid, Gabriel S. Iloka, Sunday O. Bodede, Samson O. Owalude, Adedibu C. Tella ...

  19. Spectroscopic analysis of chromium bioremediation products

    Science.gov (United States)

    Varadharajan, C.; Nico, P. S.; Yang, L.; Marcus, M. A.; Steefel, C.; Larsen, J. T.; Beller, H. R.; Brodie, E. L.

    2010-12-01

    Remediation of chromium contamination frequently involves reducing the toxic and soluble hexavalent form, Cr(VI), to the relatively harmless and mostly immobile trivalent state, Cr(III). The objective of this study is to identify the biogeochemical reactions that control in situ chromium reduction in the presence of different dominant electron acceptors, i.e., NO3-, Fe(III), and SO42-. It was hypothesized that indirect, abiotic reduction of Cr(VI) by reduced metabolic products [Fe(II) and sulfides] would dominate over direct enzymatic reduction by denitrifying, iron-reducing, or sulfate-reducing bacteria. It is further hypothesized that the enzymatic reduction of Cr(VI) would produce relatively pure chromium hydroxide precipitates, whereas indirect reduction would result in mixed Cr-Fe hydroxide solid phases. Flow-through columns containing homogenized sediments from the 100H site at Hanford, WA were subjected to nitrate-, sulfate- or iron-reducing conditions in the presence of 5 µM Cr(VI) and 5 mM lactate. Cr(VI) was depleted in the effluent solutions from the nitrate- and sulfate-reducing columns; however only a small amount of Cr(VI) was removed under iron-reducing conditions. Preliminary analysis of micro X-ray absorption spectra indicate that the untreated and iron-reducing column sediments contained pre-existing Cr in the form of primary minerals, e.g. chromite and/or Cr-bearing micas. However, there was an increase in the relative abundance of mixed-phase Cr-Fe hydroxides, i.e., Cr1-xFex(OH)3 in the nitrate- and sulfate-treated columns. A possible explanation for the observations is that the production of Fe(II) was enhanced under the nitrate- and sulfate- reducing conditions, and was most likely sulfide-driven in the latter case. The Fe(II) was subsequently available for reduction of Cr(VI) resulting in the mixed-phase precipitates. The results from the spectroscopic analysis support the hypothesis that Fe(II)-mediated Cr reduction prevails over direct

  20. Biochemical activity of a fluorescent dye rhodamine 6G: Molecular modeling, electrochemical, spectroscopic and thermodynamic studies.

    Science.gov (United States)

    Al Masum, Abdulla; Chakraborty, Maharudra; Ghosh, Soumen; Laha, Dipranjan; Karmakar, Parimal; Islam, Md Maidul; Mukhopadhyay, Subrata

    2016-11-01

    Interaction of CT DNA with Rhodamine 6G (R6G) has been studied using molecular docking, electrochemical, spectroscopic and thermodynamic methods. From the study, it was illustrated that Rhodamine 6G binds to the minor groove of CT DNA. The binding was cooperative in nature. Circular voltametric study showed significant change in peak current and peak potential due to complexation. All the studies showed that the binding constant was in the order of 10 6 M -1 . Circular dichroic spectra showed significant conformational change on binding and DNA unwind during binding. Thermodynamic study showed that binding was favored by negative enthalpy and positive entropy change. From thermodynamic study it was also observed that several positive and negative free energies played significant role during binding and the unfavorable conformational free energy change was overcame by highly negative hydrophobic and salt dependent free energy changes. The experimental results were further validated using molecular docking study and the effect of structure on binding has been studied theoretically. From docking study it was found that the hydrophobic interaction and hydrogen bonds played a significant role during binding. The dye was absorbed by cell and this phenomenon was studied using fluorescent microscope. Cell survivability test showed that the dye active against Human Breast Cancer cells MDA-MB 468. ROS study showed that the activity is due to the production of reactive oxygen. Copyright © 2016 Elsevier B.V. All rights reserved.

  1. Synchrotron x-ray microbeam characteristics for x-ray fluorescence analysis

    International Nuclear Information System (INIS)

    Iida, Atsuo; Noma, Takashi

    1995-01-01

    X-ray fluorescence analysis using a synchrotron x-ray microprobe has become an indispensable technique for non-destructive micro-analysis. One of the most important parameters that characterize the x-ray microbeam system for x-ray fluorescence analysis is the beam size. For practical analysis, however, the photon flux, the energy resolution and the available energy range are also crucial. Three types of x-ray microbeam systems, including monochromatic and continuum excitation systems, were compared with reference to the sensitivity, the minimum detection limit and the applicability to various types of x-ray spectroscopic analysis. 16 refs., 5 figs

  2. Investigation on interaction of prulifloxacin with pepsin: A spectroscopic analysis

    Science.gov (United States)

    Huang, Yabei; Yan, Jie; Liu, Benzhi; Yu, Zhang; Gao, Xiaoyan; Tang, Yingcai; Zi, Yanqin

    2010-03-01

    The interaction between prulifloxacin, a kind of new oral taking antibiotic and pepsin, a kind of enzyme in the stomach has been investigated in vitro under a simulated physiological condition by different spectroscopic methods. The intrinsic fluorescence of pepsin was strongly quenched by prulifloxacin. This effect was rationalized in terms of a static quenching procedure. The binding parameters have been evaluated by fluorescence quenching methods. The negative value of Δ G0 reveals that the binding process is a spontaneous process. The binding distance R between donor (pepsin) and acceptor (prulifloxacin) was obtained according to the Förster's resonance energy transfer theory and found to be 0.95 nm. The results obtained herein will be of biological significance in pharmacology and clinical medicine.

  3. Pathological changes in Alzheimer"s brain evaluated with fluorescence emission analysis (FEA)

    Science.gov (United States)

    Christov, Alexander; Ottman, Todd; Grammas, Paula

    2004-07-01

    Development of AD is associated with cerebrovascular deposition of amyloid beta (Aβ) as well as a progressive increase in vasular collagen content. Both AΒ and collagen are naturally fluorescent compounds when exposed to UV light. We analyzed autofluorescence emitted from brain tissue samples and isolated brain resistance vessels harvested postmortem from patients with Alzheimer's disease (AD) and age-matched controls. Fluorescence emission, excited at 355 nm with an Nd:YAG laser, was measured using a fiber-optic based fluorescence spectroscopic system for tissue analysis. Significantly higher values of fluorescence emission intensity (Pwestern blot analysis showed elevated levels of type I and type III collagen, and reduced levels of type IV collagen in resistance vessels from AD patients, compared to control samples. In addition, using direct scanning of the cortical suface for fluoresxcence emission by the laser-induced fluorescence spectroscopy system we detected a significantly (Ptechnique for detecting structural changes in AD brain tissue.

  4. Temperature effect on fluorescence and UV-vis absorption spectroscopic properties of Dy(III) in molten LiCl-KCl eutectic salt

    Energy Technology Data Exchange (ETDEWEB)

    Kim, Bong Young [Department of Nuclear and Quantum Engineering, KAIST, 291 Daehak-ro, Yuseong-gu, Daejeon 305-701 (Korea, Republic of); Yun, Jong-Il, E-mail: jiyun@kaist.ac.kr [Department of Nuclear and Quantum Engineering, KAIST, 291 Daehak-ro, Yuseong-gu, Daejeon 305-701 (Korea, Republic of)

    2012-11-15

    The spectroscopic properties of Dy(III) in molten LiCl-KCl eutectic salt at high temperature were investigated by time-resolved laser fluorescence spectroscopy (TRLFS) and UV-vis absorption spectroscopy. For the first time, a visible fluorescence of Dy(III) in high-temperature LiCl-KCl eutectic salt was measured due to the electronic transitions from {sup 4}I{sub 13/2} and {sup 4}F{sub 9/2} to {sup 6}H{sub J/2} (J=7, Horizontal-Ellipsis ,15). The effect of temperature on hypersensitivity for the electronic transitions from the {sup 4}I{sub 13/2} excited state ({approx}25700 cm{sup -1}) of Dy(III) was confirmed by altering temperature in chloride eutectic salt in accord with optical absorption measurements. The molar absorptivity of {sup 4}I{sub 13/2} Leftwards-Arrow {sup 6}H{sub 15/2} was enhanced with increasing temperature. The fluorescence intensity of Dy(III) followed a simple mono-exponential decay curve, suggesting the formation of a single chemical species in high-temperature LiCl-KCl molten salt. - Highlights: Black-Right-Pointing-Pointer Spectroscopic characteristics of Dy(III) in the high-temperature LiCl-KCl salt. Black-Right-Pointing-Pointer In-situ chemical analysis of Dy(III) by fluorescence and absorbance measurement. Black-Right-Pointing-Pointer Temperature effect on hypersensitivity for electronic transitions from {sup 4}I{sub 13/2} excited state. Black-Right-Pointing-Pointer Single chemical species of Dy(III) exists in high-temperature LiCl-KCl salt.

  5. Spectroscopic investigations on the interaction of thioacetamide with ZnO quantum dots and application for its fluorescence sensing

    Science.gov (United States)

    Saha, Dipika; Negi, Devendra P. S.

    2018-01-01

    The purpose of the present work was to develop a method for the sensing of thioacetamide by using spectroscopic techniques. Thioacetamide is a carcinogen and it is important to detect its presence in food-stuffs. Semiconductor quantum dots are frequently employed as sensing probes since their absorption and fluorescence properties are highly sensitive to the interaction with substrates present in the solution. In the present work, the interaction between thioacetamide and ZnO quantum dots has been investigated by using UV-visible, fluorescence and infrared spectroscopy. Besides, dynamic light scattering (DLS) has also been utilized for the interaction studies. UV-visible absorption studies indicated the bonding of the lone pair of sulphur atom of thioacetamide with the surface of the semiconductor. The fluorescence band of the ZnO quantum dots was found to be quenched in the presence of micromolar concentrations of thioacetamide. The quenching was found to follow the Stern-Volmer relationship. The Stern-Volmer constant was evaluated to be 1.20 × 105 M- 1. Infrared spectroscopic measurements indicated the participation of the sbnd NH2 group and the sulphur atom of thioacetamide in bonding with the surface of the ZnO quantum dots. DLS measurements indicated that the surface charge of the semiconductor was shielded by the thioacetamide molecules.

  6. Spectroscopic investigations on the interaction of thioacetamide with ZnO quantum dots and application for its fluorescence sensing.

    Science.gov (United States)

    Saha, Dipika; Negi, Devendra P S

    2018-01-15

    The purpose of the present work was to develop a method for the sensing of thioacetamide by using spectroscopic techniques. Thioacetamide is a carcinogen and it is important to detect its presence in food-stuffs. Semiconductor quantum dots are frequently employed as sensing probes since their absorption and fluorescence properties are highly sensitive to the interaction with substrates present in the solution. In the present work, the interaction between thioacetamide and ZnO quantum dots has been investigated by using UV-visible, fluorescence and infrared spectroscopy. Besides, dynamic light scattering (DLS) has also been utilized for the interaction studies. UV-visible absorption studies indicated the bonding of the lone pair of sulphur atom of thioacetamide with the surface of the semiconductor. The fluorescence band of the ZnO quantum dots was found to be quenched in the presence of micromolar concentrations of thioacetamide. The quenching was found to follow the Stern-Volmer relationship. The Stern-Volmer constant was evaluated to be 1.20×10 5 M -1 . Infrared spectroscopic measurements indicated the participation of the NH 2 group and the sulphur atom of thioacetamide in bonding with the surface of the ZnO quantum dots. DLS measurements indicated that the surface charge of the semiconductor was shielded by the thioacetamide molecules. Copyright © 2017 Elsevier B.V. All rights reserved.

  7. Spectroscopic and chemical reactivity analysis of D-Myo-Inositol ...

    Indian Academy of Sciences (India)

    2017-06-20

    Jun 20, 2017 ... ... Pramana – Journal of Physics; Volume 89; Issue 1. Spectroscopic and chemical reactivity analysis of D-Myo-Inositol using quantum chemical approach and its experimental verification. DEVENDRA P MISHRA ANCHAL SRIVASTAVA R K SHUKLA. Special Issue Volume 89 Issue 1 July 2017 Article ID 12 ...

  8. Synthesis and Spectroscopic Analysis of Schiff Bases of Imesatin ...

    African Journals Online (AJOL)

    ADOWIE PERE

    Keywords: Schiff bases, isatin, imesatin, spectroscopic analysis, biological activity. Isatin (1H-indole-2, 3-Dione) was first synthesized by. Erdman, 1840 and established by Laurent, 1841 as a product from the oxidation of indigo by nitric and chromic acids. The synthetic versatility of Isatin has led to the wide applications of ...

  9. Quantitative comparison of analysis methods for spectroscopic optical coherence tomography

    NARCIS (Netherlands)

    Bosschaart, Nienke; van Leeuwen, Ton G.; Aalders, Maurice C. G.; Faber, Dirk J.

    2013-01-01

    Spectroscopic optical coherence tomography (sOCT) enables the mapping of chromophore concentrations and image contrast enhancement in tissue. Acquisition of depth resolved spectra by sOCT requires analysis methods with optimal spectral/spatial resolution and spectral recovery. In this article, we

  10. Development of ultrasensitive spectroscopic analysis technology -Development of atomic spectroscopy technology-

    International Nuclear Information System (INIS)

    Cha, Hyung Ki; Song, Ky Seok; Rhee, Young Joo; Baik, Dae Hyun; Shin, Jang Soo; Kim, Duck Hyun; Yang, Ki Ho; Yi, Jong Hoon

    1994-07-01

    In this project, three principal techniques are developed. The laser photoionization spectrometry (LAPIS) is used for the ultrasensitive detection for heavy metals such as Pb and Cd. The Laser atomic fluorescence spectrometry is applied to the quantitative analysis of the lanthanide and actinide elements. And the DIAL remote sensing system is used for monitoring the ozone concentration and the atmospheric pollution. A time-of-flight mass spectrometer and a high efficient atomic beam generator were designed and manufactured. Various spectroscopic parameters and optimum analytical condition were investigated. By using the laser fluorescence technique, U, Eu and Sm in solution were quantitatively analyzed. The basic researches for the direct analytical method of solid samples were also carried out. The DIAL system for ozone remote sensing was developed and ozone concentration above Taejon were obtained. (Author)

  11. Spectroscopic analysis of bones for forensic studies

    Energy Technology Data Exchange (ETDEWEB)

    Tofanelli, Mirko [Applied and Laser Spectroscopy Laboratory, Institute of Chemistry of Organometallic Compounds, Research Area of CNR, Via G. Moruzzi, 1, 56124 Pisa (Italy); Pardini, Lorenzo [Institut für Physik und IRIS Adlershof, Humboldt-Universität zu Berlin, Zum Großen Windkanal 6, 12489 Berlin (Germany); Borrini, Matteo [Research Centre in Evolutionary Anthropology and Palaeoecology, School of Natural Sciences and Psychology, Liverpool John Moores University, Byrom Street, Liverpool (United Kingdom); Bartoli, Fulvio; Bacci, Alessandra [Department of Biology, University of Pisa, Via A. Volta, 4, 56126 Pisa (Italy); D’Ulivo, Alessandro; Pitzalis, Emanuela; Mascherpa, Marco Carlo; Legnaioli, Stefano; Lorenzetti, Giulia; Pagnotta, Stefano [Applied and Laser Spectroscopy Laboratory, Institute of Chemistry of Organometallic Compounds, Research Area of CNR, Via G. Moruzzi, 1, 56124 Pisa (Italy); Holanda Cavalcanti, Gildo de [Instituto de Fìsica, Universidade Federal Fluminense, Av. Gal. Milton Tavares de Souza, s/no Campus da Praia Vermelha, CEP 24210-346, Niterói, Rio de Janeiro (Brazil); Lezzerini, Marco [Department of Earth Sciences, University of Pisa, Via Santa Maria, 53, 56126 Pisa (Italy); Palleschi, Vincenzo, E-mail: vincenzo.palleschi@cnr.it [Applied and Laser Spectroscopy Laboratory, Institute of Chemistry of Organometallic Compounds, Research Area of CNR, Via G. Moruzzi, 1, 56124 Pisa (Italy)

    2014-09-01

    The elemental analysis of human bones can give information about the dietary habits of the deceased, especially in the last years of their lives, which can be useful for forensic studies. The most important requirement that must be satisfied for this kind of analysis is that the concentrations of analyzed elements are the same as ante mortem. In this work, a set of bones was analyzed using Laser-Induced Breakdown Spectroscopy (LIBS) and validated using Inductively Coupled Plasma–Optical Emission Spectroscopy (ICP-OES), in order to compare those two techniques and to investigate the effect of possible alterations in the elemental concentrations' proportion resulting from the treatment usually applied for preparing the bones for traditional forensic analysis. The possibility that elemental concentrations' changes would occur after accidental or intentional burning of the bones was also studied. - Highlights: • The LIBS analysis of (animal) bones is presented, to establish its feasibility for forensic studies. • Untreated bones and bones subjected to high temperatures (boiled, burned) were analyzed. • A simple calibration, using a single reference sample, gave reasonable quantitative results. • The comparison of the results demonstrates that LIBS analysis can provide nutritional information. • The nutritional information obtained are the same on untreated, boiled and burned bones.

  12. Spectroscopic analysis of bones for forensic studies

    International Nuclear Information System (INIS)

    Tofanelli, Mirko; Pardini, Lorenzo; Borrini, Matteo; Bartoli, Fulvio; Bacci, Alessandra; D’Ulivo, Alessandro; Pitzalis, Emanuela; Mascherpa, Marco Carlo; Legnaioli, Stefano; Lorenzetti, Giulia; Pagnotta, Stefano; Holanda Cavalcanti, Gildo de; Lezzerini, Marco; Palleschi, Vincenzo

    2014-01-01

    The elemental analysis of human bones can give information about the dietary habits of the deceased, especially in the last years of their lives, which can be useful for forensic studies. The most important requirement that must be satisfied for this kind of analysis is that the concentrations of analyzed elements are the same as ante mortem. In this work, a set of bones was analyzed using Laser-Induced Breakdown Spectroscopy (LIBS) and validated using Inductively Coupled Plasma–Optical Emission Spectroscopy (ICP-OES), in order to compare those two techniques and to investigate the effect of possible alterations in the elemental concentrations' proportion resulting from the treatment usually applied for preparing the bones for traditional forensic analysis. The possibility that elemental concentrations' changes would occur after accidental or intentional burning of the bones was also studied. - Highlights: • The LIBS analysis of (animal) bones is presented, to establish its feasibility for forensic studies. • Untreated bones and bones subjected to high temperatures (boiled, burned) were analyzed. • A simple calibration, using a single reference sample, gave reasonable quantitative results. • The comparison of the results demonstrates that LIBS analysis can provide nutritional information. • The nutritional information obtained are the same on untreated, boiled and burned bones

  13. Development of Ultra-sensitive Laser Spectroscopic Analysis Technology

    Energy Technology Data Exchange (ETDEWEB)

    Cha, H. K.; Kim, D. H.; Song, K. S. (and others)

    2007-04-15

    Laser spectroscopic analysis technology has three distinct merits in detecting various nuclides found in nuclear fields. High selectivity originated from small bandwidth of tunable lasers makes it possible to distinguish various kinds of isotopes and isomers. High intensity of focused laser beam makes it possible to analyze ultratrace amount. Remote delivery of laser beam improves safety of workers who are exposed in dangerous environment. Also it can be applied to remote sensing of environment pollution.

  14. A spectroscopic analysis of the chemically peculiar star HD 207561

    Science.gov (United States)

    Joshi, S.; Semenko, E.; Martinez, P.; Sachkov, M.; Joshi, Y. C.; Seetha, S.; Chakradhari, N. K.; Mary, D. L.; Girish, V.; Ashoka, B. N.

    2012-08-01

    In this paper we present a high-resolution spectroscopic analysis of the chemically peculiar star HD 207561. During a survey programme to search for new rapidly oscillating Ap (roAp) stars in the Northern hemisphere, Joshi et al. observed significant photometric variability on two consecutive nights in the year 2000. The amplitude spectra of the light curves obtained on these two nights showed oscillations with a frequency of 2.79 mHz (P ˜ 6 min). However, subsequent follow-up observations could not confirm any rapid variability. In order to determine the spectroscopic nature of HD 207561, high-resolution spectroscopic and spectropolarimetric observations were carried out. A reasonable fit of the calculated Hβ line profile to the observed one yields an effective temperature (Teff) and surface gravity (log g) of 7300 K and 3.7 dex, respectively. The derived projected rotational velocity (v sin i) for HD 207561 is 74 km s-1, indicative of a relatively fast rotator. The position of HD 207561 in the Hertzsprung-Russell diagram implies that this is slightly evolved from the main-sequence and located well within the δ-Scuti instability strip. The abundance analysis indicates the star has slight underabundances of Ca and Sc and mild overabundances of iron-peak elements. The spectropolarimetric study of HD 207561 shows that the effective magnetic field is within the observational error of 100 G. The spectroscopic analysis revealed that the star has most of the characteristics similar to an Am star, rather than an Ap star, and that it lies in the δ-Scuti instability strip; hence roAp pulsations are not expected in HD 207561, but low-overtone modes might be excited. The present work is based on the analysis of data collected with the Russian 6-m telescope BTA operated by the Special Astrophysical Observatory of the Russian Academy of Sciences (SAO RAS).

  15. GAS CHROMATOGRAPHIC AND SPECTROSCOPIC ANALYSIS OF ...

    African Journals Online (AJOL)

    Peroxyformic acid prepared in-situ was employed for epoxidation of canola oil in the presence of toluene. Gas chromatographic analysis of the product revealed the following species: C16:0; C18:0; C18:1; C18:2; C18:3; monoepoxy C18:0; monoepoxy C18:1; monoepoxy C18:2; diepoxy C18:0; diepoxy C18:1 and triepoxy ...

  16. Mass spectroscopic analysis of atmospheric particulate matter

    International Nuclear Information System (INIS)

    Wippel, R.

    1997-02-01

    Particulate matter (PM) in the atmosphere vary greatly in origin, in their physical and chemical properties and their effects on climate, atmospheric chemistry and health. Aerosol particles with an aerodynamic diameter less than two μm can enter the respiratory tract of humans when inhaled. Bulk analysis of ambient dust particles was performed using an inductively coupled plasma mass spectrometer (ICP-MS). The size-fractionated collected samples were analyzed after a leaching procedure that simulates the solution reactions occurring in the lungs. A disadvantage of bulk analysis is that it gives no information about the distribution of a certain element within the particles under investigation. A Laser-Microprobe-Mass-Analyzer (LAMMA-500) was used to obtain this information. At sampling sites in Austria and in Zimbabwe, Africa, single particles were sampled using a self-made impactor. One of the final aims in environmental analysis is to successfully apply receptor models that relate the chemical and physical properties of a receptor site to a source. The knowledge of the sources of atmospheric particulate matter is essential for environmental policy makers as well as for epidemiological studies. Artificial neural networks (ANN) have a remarkable ability to handle LAMMA-data. Three ANNs were used as a pattern recognition tool for LAMMA mass spectral data: a back-propagation net, a Kohonen network,and a counter-propagation net. Standard source profiles from the United States Environmental Protection Agency were used as training and test data of the different nets. The elemental patterns of the sum of 100 mass spectra of fine dust particles were presented to the trained nets and satisfactory recognition (> 80 %) was obtained. (author)

  17. Spectroscopic analysis of automotive engine oil

    Science.gov (United States)

    Dahmani, Rachid; Gupta, Neelam

    2002-02-01

    Infrared absorption spectroscopy (IR) and acousto-optic tunable filter (AOTF) technology were combined to develop a portable spectrophotometer for use in engine oil analysis to identify and quantify oil contaminants and residue products, Preliminary measurements were taken with a field-portable AOTF-based spectrometer (2 to 4.5 micrometers ) and an FTIR spectrometer (2 to 25 micrometers ) for comparison. Absorption spectra of used and unused oil samples were measured and compared to determine absorption changes between the various samples resulting from oil degradation and any chemical reactions that might have taken place during high- temperature engine lubrication. These preliminary results indicate that IR spectroscopy can be used for oil quality monitoring in automotive engines, which will help predict and prevent engine failure and degradation. This work can be extended to other remote sensing applications, such as the monitoring of environmental oil spills.

  18. Fluorescence spectroscopic studies on substituted porphyrins in homogeneous solvents and cationic micellar medium

    International Nuclear Information System (INIS)

    Phukan, Smritakshi; Mishra, Bhupendra; Chandra Shekar, K.P.; Kumar, Anil; Kumar, Dalip; Mitra, Sivaprasad

    2013-01-01

    Steady state and time-resolved fluorescence properties of porphyrin appended 1,3,4-oxadiazoles and thiazoles were described in homogeneous medium as well as in presence of cationic surfactant cetyltrimethylammonium bromide (CTAB). The electron withdrawing substituent on the porphyrin moiety in both the cases make a donor–spacer–acceptor type of intramolecular photoinduced electron transfer (PET) system resulting substantial quenching in porphyrin fluorescence due to partial energy migration towards the acceptor in the excited state. The increase in fluorescence yield as well as appreciable difference in fluorescence decay behavior in aqueous buffer solution of pH 4.2 from that in chloroform solution is believed due to partial protonation of the porphyrin ring. All the investigated systems show preferential binding into the interfacial region of the micellar sub-domain with varying degree of penetration depending on the nature of the substituent. Almost 2–4 fold increase in fluorescence yield for the probes is explained on the basis of restricted flexibility and corresponding decrease in total nonradiative rate inside the micellar interface layer. - Highlights: ► Synthesis and detail fluorescence studies of a series of porphyrin appended 1,3,4-oxadiazoles and thiazoles. ► Comparison of homogeneous solvent study with that in CTAB. ► Substantial porphyrin fluorescence quenching in donor–spacer–acceptor type system. ► Preferential binding of the substituted porphyrins in micellar sub-domain. ► Appreciable increase in fluorescence yield in micellar interface layer is due to decrease in total nonradiative rate.

  19. Fluorescence excitation spectroscopic imaging with a tunable light source and dimensionality reduction using FR-IsoMap

    Science.gov (United States)

    Koh, Kevin; Wood, Tobias; Zhang, Hao; Lekadir, Karim; Elson, Daniel; Yang, Guang-Zhong

    2008-02-01

    This paper presents an optical system for performing excitation resolved imaging of fluorescent dyes, tissue phantoms and ex vivo tissues. The excitation source was a supercontinuum generated in a highly nonlinear fibre, spectrally filtered using dispersive optics and a movable slit or digital micromirror device. This allowed excitation with multiple spectra, which may be chosen to optimize the fluorescence yield from a particular fluorophore, or to maximize discrimination between multiple labels. As an initial validation, the analysis of fluorescent dye solutions embedded in collagen gels in the presence of scatterers and absorbers by using fixed reference isomap (FR-IsoMap) is presented, followed by initial evaluation with human lung bronchial tissue. The proposed system has potential applications for in vivo fluorescence endoscopy of cancerous tissues through excitation spectral selection and analysis with FR-IsoMap.

  20. Optical spectroscopic analysis for the discrimination of extra-virgin olive-oil (Conference Presentation)

    Science.gov (United States)

    McReynolds, Naomi; Auñón Garcia, Juan M.; Guengerich, Zoe; Smith, Terry K.; Dholakia, Kishan

    2017-02-01

    We present an optical spectroscopic technique, making use of both Raman signals and fluorescence spectroscopy, for the identification of five brands of commercially available extra-virgin olive-oil (EVOO). We demonstrate our technique on both a `bulk-optics' free-space system and a compact device. Using the compact device, which is capable of recording both Raman and fluorescence signals, we achieved an average sensitivity and specificity of 98.4% and 99.6% for discrimination, respectively. Our approach demonstrates that both Raman and fluorescence spectroscopy can be used for portable discrimination of EVOOs which obviates the need to use centralised laboratories and opens up the prospect of in-field testing. This technique may enable detection of EVOO that has undergone counterfeiting or adulteration. One of the main challenges facing Raman spectroscopy for use in quality control of EVOOs is that the oxidation of EVOO, which naturally occurs due to aging, causes shifts in Raman spectra with time, which implies regular retraining would be necessary. We present a potential method of analysis to minimize the effect that aging has on discrimination efficiency; we show that by discarding the first principal component, which contains information on the variations due to oxidation, we can improve discrimination efficiency thus improving the robustness of our technique.

  1. Encapsulation of serotonin in β-cyclodextrin nano-cavities: Fluorescence spectroscopic and molecular modeling studies

    Science.gov (United States)

    Chaudhuri, Sudip; Chakraborty, Sandipan; Sengupta, Pradeep K.

    2010-06-01

    Serotonin is a physiologically important biogenic amine, deficiency of which leads to mental disorders such as Alzheimer's disease, schizophrenia, infantile autism, and depression. Both β-cyclodextrin (β-CD) and its chemically substituted synthetic varieties (often possessing enhanced aqueous solubility and improved drug complexing abilities) are finding wide applications as drug delivery vehicles. Here we have studied the encapsulation of serotonin in β-CD and succinyl-2-hydroxypropyl β-cyclodextrin (SHP-β-CD) by exploiting the intrinsic serotonin fluorescence. Enhanced fluorescence emission intensity (which increases by ˜18% and 34% in β-CD and SHPβ-CD respectively) and anisotropy ( r) ( r = 0.075 and 0.1 in β-CD and SHPβ-CD respectively) are observed in presence of the cyclodextrins. From the fluorescence data host-guest interaction with 1:1 stoichiometry is evident, the association constants ( K) being 126.06 M -1 and 461.62 M -1 for β-CD and SHPβ-CD respectively. Additionally, molecular docking and semiempirical calculations have been carried out which provide, for the first time, detailed insights regarding the encapsulation process. In particular, it is evident that the indole ring is inserted within the β-CD cavity with the aliphatic amine side chain protruding towards the primary rim of the β-CD cavity. Docking calculations reveal that hydrogen bonding interactions are involved in the formation of the inclusion complex. Semiempirical calculations indicate that formation of the 1:1 inclusion complex is energetically favorable which is consistent with the fluorescence data.

  2. Spectroscopic evidence of xanthine compounds fluorescence quenching effect on water-soluble porphyrins

    Science.gov (United States)

    Makarska-Bialokoz, Magdalena

    2015-02-01

    The formation of π-stacked complexes between water-soluble porphyrins: 4,4‧,4″,4″‧-(21H,23H-porphine-5,10,15,20-tetrayl)tetrakis-(benzoic acid) (H2TCPP), 5,10,15,20-tetrakis(4-sulfonatophenyl)-21H,23H-porphine (H2TPPS4), 5,10,15,20-tetrakis[4-(trimethylammonio)phenyl]-21H,23H-porphine tetra-p-tosylate (H2TTMePP), 5,10,15,20-tetrakis(1-methyl-4-pyridyl)-21H,23H-porphine tetra-p-tosylate (H2TMePyP), the Cu(II) complexes of H2TTMePP and H2TMePyP, as well as chlorophyll a with xanthine, theophylline (1,3-dimethylxanthine) and theobromine (3,7-dimethylxanthine) has been studied analysing their absorption and steady-state fluorescence spectra in aqueous (or acetone in case of chlorophyll a) solution. During titration by the compounds from xanthine group the bathochromic effect in the porphyrin absorption spectra as well as the hypochromicity of the porphyrin Soret maximum can be noticed. The fluorescence quenching effect observed during interactions in the systems examined suggests the process of static quenching. The association and fluorescence quenching constants are of the order of magnitude of 103 - 102 mol-1. The results obtained show that xanthine and its derivatives can quench the fluorescence of the porphyrins according to the number of methyl groups in the molecule of quencher.

  3. Limestone rocks analysis by X-ray fluorescence analysis

    International Nuclear Information System (INIS)

    Izquierdo M, G.; Ponce R, R.; Vazquez J, J.

    1996-01-01

    By request of a private company, employing basically X-ray fluorescence analysis (X RF), was established a fast and accurate method for the analysis of the major elements in limestone rocks. Additionally, for complementing analysis was determined by ion chromatography, the chlorides appearance and by atomic absorption of sodium. By gravimetry, was determined the losses by ignition and the alpha quartz. (Author)

  4. X-ray Fluorescence Method for Trace Analysis and Imaging

    OpenAIRE

    Hayakawa, Shinjiro

    2000-01-01

    X-ray fluorescence analysis has a long history as a conventional bulk elemental analysis with medium sensitivity. However, with the use of synchrotron radiation x-ray fluorescence method has become a unique analytical technique which can provide trace elemental information with the spatial resolution. To obtain quantitative information of trace elemental distribution by using the x-ray fluorescence method, theoretical description of x-ray fluorescence yield is described. Moreover, methods and...

  5. Vibrational spectroscopic analysis of breast calcifications and surrounding tissue

    Science.gov (United States)

    Baker, Rebecca N.; Smith, Jennifer; Rogers, Keith D.; Stone, Nicholas

    2006-02-01

    Breast calcifications can be found in both benign and malignant lesions and the composition of these calcifications can indicate the possible disease state. Calcium oxalate dihydrate (COD) is found to be associated with benign lesions, however calcium hydroxyapatite (HAP) is found mainly in malignant tissue. As current practices such as mammography and histopathology examine the morphology of the specimen, they can not reliably distinguish between the two types of calcification, which frequently are the only features that indicate the presence of a cancerous lesion. Therefore this information can be used to make a simplistic diagnostic decision, if the biochemistry of the calcifications can be probed. Studies have been performed utilising the synchrotron mid-IR beamline at Daresbury (UK) to probe the local tissue biochemistry around breast calcifications. Raman and FTIR spectroscopic analysis of the same specimen have also been performed and spectral maps have been collected of areas in and around calcifications. Principal component analysis was used to identify the major differences in the spectra across each map. FTIR and Raman spectroscopic techniques provide complementary biochemical information and demonstrate great potential for determining biochemical changes in calcified breast tissue. Further studies will be carried out using these techniques to investigate the formation mechanisms and effects of hydroxyapatite on breast tissue and to correlate the type of hydroxyapatite present to the tumour grade.

  6. Capacity of X-ray fluorescence analysis

    International Nuclear Information System (INIS)

    Wobrauschek, P.; Kregsamer, P.

    1997-01-01

    X-Ray fluorescence analysis (XRF) is a powerful analytical tool for the qualitative and quantitative determination of chemical elements in a sample. Two different detection principles are accepted widely: wavelength dispersive and energy dispersive. Various sources for XRF are discussed: X-ray tubes, accelerators for particle induced XRF, radioactive isotopes, and the use of synchrotron radiation. Applications include environmental, technical, medical, fine art, and forensic studies. Due to the demands of research and application special techniques like total reflection XRF (TXRF) were developed with ultimately achievable detection limits in the femtogram region. The elements detectable by XRF range from Be to U. (author)

  7. Evaluation of transformer insulating oil quality using NIR, fluorescence, and NMR spectroscopic data fusion.

    Science.gov (United States)

    Godinho, Mariana S; Blanco, Marcos R; Gambarra Neto, Francisco F; Lião, Luciano M; Sena, Marcelo M; Tauler, Romà; de Oliveira, Anselmo E

    2014-11-01

    Power transformers are essential components in electrical energy distribution. One of their most important parts is the insulation system, consisting of Kraft paper immersed in insulating oil. Interfacial tension and color are major parameters used for assessing oil quality and the system׳s degradation. This work proposes the use of near infrared (NIR), molecular fluorescence, and (1)H nuclear magnetic resonance (NMR) spectroscopy methods combined with chemometric multivariate calibration methods (Partial Least Squares - PLS) to predict interfacial tension and color in insulating mineral oil samples. Interfacial tension and color were also determined using tensiometry and colorimetry as standard reference methods, respectively. The best PLS model was obtained when NIR, fluorescence, and NMR data were combined (data fusion), demonstrating synergy among them. An optimal PLS model was calculated using the selected group of variables according to their importance on PLS projections (VIP). The root mean square errors of prediction (RMSEP) values of 2.9 mN m(-1) and 0.3 were estimated for interfacial tension and color, respectively. Mean relative standard deviations of 1.5% for interfacial tension and 6% for color were registered, meeting quality control requirements set by electrical energy companies. The methods proposed in this work are rapid and simple, showing great advantages over traditional approaches, which are slow and environmentally unfriendly due to chemical waste generation. Copyright © 2014 Elsevier B.V. All rights reserved.

  8. Imaging spectroscopic analysis at the Advanced Light Source

    International Nuclear Information System (INIS)

    MacDowell, A. A.; Warwick, T.; Anders, S.; Lamble, G.M.; Martin, M.C.; McKinney, W.R.; Padmore, H.A.

    1999-01-01

    One of the major advances at the high brightness third generation synchrotrons is the dramatic improvement of imaging capability. There is a large multi-disciplinary effort underway at the ALS to develop imaging X-ray, UV and Infra-red spectroscopic analysis on a spatial scale from. a few microns to 10nm. These developments make use of light that varies in energy from 6meV to 15KeV. Imaging and spectroscopy are finding applications in surface science, bulk materials analysis, semiconductor structures, particulate contaminants, magnetic thin films, biology and environmental science. This article is an overview and status report from the developers of some of these techniques at the ALS. The following table lists all the currently available microscopes at the. ALS. This article will describe some of the microscopes and some of the early applications

  9. Synthesis, spectroscopic, fluorescence properties and biological evaluation of novel Pd(II) and Cd(II) complexes of NOON tetradentate Schiff bases.

    Science.gov (United States)

    Ali, Omyma A M

    2014-01-01

    The solid complexes of Pd(II) and Cd(II) with N,N/bis(salicylaldehyde)4,5-dimethyl-1,2-phenylenediamine (H2L(1)), and N,N/bis(salicylaldehyde)4,5-dichloro-1,2-phenylenediamine (H2L(2)) have been synthesized and characterized by several techniques using elemental analysis (CHN), FT-IR, (1)H NMR, UV-Vis spectra and thermal analysis. Elemental analysis data proved 1:1 stoichiometry for the reported complexes while spectroscopic data indicated square planar and octahedral geometries for Pd(II) and Cd(II) complexes, respectively. The prepared ligands, Pd(II) and Cd(II) complexes exhibited intraligand (π-π(∗)) fluorescence and can potentially serve as photoactive materials. Thermal behavior of the complexes was studied and kinetic parameters were determined by Coats-Redfern method. Both the ligands and their complexes have been screened for antimicrobial activities. Copyright © 2013 Elsevier B.V. All rights reserved.

  10. Raman spectroscopic analysis of a `noli me tangere' painting

    Science.gov (United States)

    Hibberts, Stephen; Edwards, Howell G. M.; Abdel-Ghani, Mona; Vandenabeele, Peter

    2016-12-01

    The discovery of an oil painting in seriously damaged condition with an important historical and a heterodox detail with possible origins in the late fifteenth century has afforded the opportunity for Raman microscopic analysis prior to its restoration being undertaken. The painting depicts a risen Christ following His crucifixion in a `noli me tangere' pose with three women in an Italian terrace garden with a stone balustrade overlooking a rural landscape and an undoubted view of late-medieval Florence. The picture has suffered much abuse and is in very poor condition, which is possibly attributable to its controversial portrayal of a polydactylic Christ with six toes on His right foot. By the late sixteenth century, after the Council of Trent, this portrayal would almost certainly have been frowned upon by the Church authorities or more controversially as a depiction of the holy. Raman spectroscopic analysis of the pigments places the painting as being consistent chronologically with the Renaissance period following the identification of cinnabar, haematite, red lead, lead white, goethite, verdigris, caput mortuum and azurite with no evidence of more modern synthetic pigments or of modern restoration having been carried out. An interesting pigment mixture found here is that of the organic dye carmine and cinnabar to produce a particular bright red pigment coloration. Stratigraphic examination of the paint fragments has demonstrated the presence of an orange resin layer immediately on top of the canvas substrate, effectively rendering the pigment as a sandwich between this substratal resin and the overlying varnish. The Raman spectroscopic evidence clearly indicates that an attribution of the artwork to the Renaissance is consistent with the scientific analysis of the pigment composition. This article is part of the themed issue "Raman spectroscopy in art and archaeology".

  11. Raman spectroscopic analysis of a 'noli me tangere' painting.

    Science.gov (United States)

    Hibberts, Stephen; Edwards, Howell G M; Abdel-Ghani, Mona; Vandenabeele, Peter

    2016-12-13

    The discovery of an oil painting in seriously damaged condition with an important historical and a heterodox detail with possible origins in the late fifteenth century has afforded the opportunity for Raman microscopic analysis prior to its restoration being undertaken. The painting depicts a risen Christ following His crucifixion in a 'noli me tangere' pose with three women in an Italian terrace garden with a stone balustrade overlooking a rural landscape and an undoubted view of late-medieval Florence. The picture has suffered much abuse and is in very poor condition, which is possibly attributable to its controversial portrayal of a polydactylic Christ with six toes on His right foot. By the late sixteenth century, after the Council of Trent, this portrayal would almost certainly have been frowned upon by the Church authorities or more controversially as a depiction of the holy. Raman spectroscopic analysis of the pigments places the painting as being consistent chronologically with the Renaissance period following the identification of cinnabar, haematite, red lead, lead white, goethite, verdigris, caput mortuum and azurite with no evidence of more modern synthetic pigments or of modern restoration having been carried out. An interesting pigment mixture found here is that of the organic dye carmine and cinnabar to produce a particular bright red pigment coloration. Stratigraphic examination of the paint fragments has demonstrated the presence of an orange resin layer immediately on top of the canvas substrate, effectively rendering the pigment as a sandwich between this substratal resin and the overlying varnish. The Raman spectroscopic evidence clearly indicates that an attribution of the artwork to the Renaissance is consistent with the scientific analysis of the pigment composition.This article is part of the themed issue 'Raman spectroscopy in art and archaeology'. © 2016 The Author(s).

  12. Effect of Moderate UVC Irradiation on Bovine Serum Albumin and Complex with Antimetabolite 5-Fluorouracil: Fluorescence Spectroscopic and Molecular Modelling Studies

    Directory of Open Access Journals (Sweden)

    Shanmugavel Chinnathambi

    2015-01-01

    Full Text Available The interaction of antimetabolite 5-fluorouracil (5FU with bovine serum albumin (BSA under UVC (253.7 nm irradiation was investigated in the present study using UV-Vis spectroscopy, steady state/time resolved fluorescence spectroscopic techniques. The stability of protein was found to be very strong when BSA gets bind to 5FU and moreover it is compared with the free BSA under UVC irradiation. From the fluorescence spectroscopic study, the stability of the complex was found to acquire 2-fold stronger than free protein. From the molecular modelling studies, we came to know the hydrogen bonds between BSA and antimetabolite 5FU are strong, up to 70.4 J/m2 under UVC irradiation.

  13. Elemental analysis of waste glass by x-ray fluorescence spectrometry

    International Nuclear Information System (INIS)

    Bickford, D.F.; Jurgensen, A.R.; Resce, J.L.; Ragsdale, R.G.; Overcamp, T.J.

    1995-01-01

    An X-ray fluorescence (XRF) technique is reported which shows promise for the elemental analysis of low-level mixed waste glasses. This technique can be used for both quantitative laboratory analysis and process control. The glass-forming melts are cast into graphite molds and resulting disks are annealed and polished. The disk is then analyzed with a wavelength dispersive X-ray fluorescence spectrometer and the elemental intensities are converted into concentration with a fundamental parameters routine without the use of matrix-matched standards. Precision of elemental determinations are all better than one percent relative standard deviation. The XRF analysis has been compared with a reference method utilizing conventional wet chemical dissolution techniques followed by atomic spectroscopic determination. Results show that there is no significant difference between these two techniques, however, the XRF technique is much simpler and faster than the wet chemical methods

  14. Spectroscopic studies of DNA interactions with food colorant indigo carmine with the use of ethidium bromide as a fluorescence probe.

    Science.gov (United States)

    Ma, Yadi; Zhang, Guowen; Pan, Junhui

    2012-10-31

    The interaction of indigo carmine (IC) with calf thymus DNA in physiological buffer (pH 7.4), using ethidium bromide (EB) dye as a fluorescence probe, was investigated by ultraviolet-visible absorption, fluorescence, and circular dichroism (CD) spectroscopy, coupled with viscosity measurements and DNA-melting studies. Hypochromicity of the absorption spectra of IC and enhancement in fluorescence polarization of IC were observed with the addition of DNA. Moreover, the binding of IC to DNA was able to decrease iodide and single-stranded DNA (ssDNA) quenching effects, increase the melting temperature and relative viscosity of DNA, and induce the changes in CD spectra of DNA. All of the evidence indicated that IC interacted with DNA in the mode of intercalative binding. Furthermore, the three-way synchronous fluorescence spectra data obtained from the interaction between IC and DNA-EB were resolved by parallel factor analysis (PARAFAC), and the results provided simultaneously the concentration information and the pure spectra for the three reaction components (IC, EB, and DNA-EB) of the system at equilibrium. This PARAFAC demonstrated that the intercalation of IC molecules into DNA proceeded by substituting for EB in the DNA-EB complex. The calculated thermodynamic parameters, ΔH° and ΔS°, suggested that both hydrophobic interactions and hydrogen bonds played a predominant role in the binding of IC to DNA.

  15. NLO properties of ester containing fluorescent carbazole based styryl dyes - Consolidated spectroscopic and DFT approach

    Science.gov (United States)

    Rajeshirke, Manali; Sekar, Nagaiyan

    2018-02-01

    The linear and nonlinear optical (NLO) properties of new fluorescent styryl dyes based on anchoring ester containing carbazole as donor appended to different acceptor groups to have a conjugated π-system with push-pull geometry are studied. The NLO properties have been determined using solvatochromic and computational methods. Three different TD-DFT functional are used namely, B3LYP, BHandHLYP, and CAM-B3LYP, with aim of elucidating better functional for NLOphores. Further, the two photon properties (σ2PA) have been described theoretically by two level model considering the dipole moment difference between the ground and the final electronic states and bypassing the intermediated resonance state. The compounds with a high charge transfer from the acceptor group to the carbazole ring have relatively high two-photon absorption cross-sections (60-317 GM). The linear polarizability (αCT), first order hyperpolarizability (β) and second order hyperpolarizability (ɣ) for 4c dye was the highest among the studied dyes which is attributed to the lesser energy gap evident by both the methods. But in contrary, the σ2PA cross-section value was low for dye 4c which is due to the presence of freely rotatable twisted phenyl ring in the conjugation path, pulling the electron density towards itself and thus lead to decrease in σ2PA cross-section. Structure-property relationship is better understood by the correlation of bond length alternation/bond order alternation (BLA/BOA) with NLO properties of dyes. Thus by simple solvatochromic method and computational method, we have screened the carbazole styryls as NLO candidates with good first order hyperpolarizability and good two photon cross-section.

  16. TRANES analysis of the fluorescence of nile red in organized ...

    Indian Academy of Sciences (India)

    Home; Journals; Journal of Chemical Sciences; Volume 113; Issue 2. TRANES analysis of the fluorescence of nile red in ... in the ground and/or excited state). TRANES analysis shows that the fluorescence emission of nile red in TX micelle and egg-PC membrane is due to two emissive species solubilized in different sites.

  17. Chemical and spectroscopic analysis of lignin in isolated flax fibers.

    Science.gov (United States)

    Morrison, W H; Himmelsbach, D S; Akin, D E; Evans, J D

    2003-04-23

    The chemistry of pure flax fibers, free of contaminating nonfiber components, has not been determined. Fibers from the center sections of the stem of seed and fiber flax (Linum usitatissium L.), which had been retted after soaking in water and removal of the epidermis by hand, underwent chemical and spectroscopic analysis. Wet chemical analysis showed only trace indications of aromatics and no long chain fatty acids or alcohols in fibers. Pyrolysis mass spectroscopy (PyMS) and pyrolysis gas chromatography mass spectrometry (PyGCMS) showed only trace amounts of aromatic constituents that could be attributed to the presence of lignin. Mid-infrared (Mid-IR) and Raman spectroscopy of these fibers showed no aromatic compounds present. This study suggests that earlier work reporting the presence of lignin ranging from 1 to 4% may be the result of residual shive or epidermis/cuticle material remaining after the retting process which may be responsible for the favorable properties desired by the composites industry.

  18. Spectroscopic studies of neutral and chemically oxidized species of β-carotene, lycopene and norbixin in CH{sub 2}Cl{sub 2}: Fluorescence from intermediate compounds

    Energy Technology Data Exchange (ETDEWEB)

    Alwis, D.D.D.H [Department of Chemistry, The Open University of Sri Lanka, Nawala (Sri Lanka); Department of Chemistry, University of Sri Jayewardenepura, Nugegoda (Sri Lanka); Chandrika, U.G. [Department of Biochemistry, University of Sri Jayewardenepura, Nugegoda (Sri Lanka); Jayaweera, P.M., E-mail: pradeep@sjp.ac.lk [Department of Chemistry, University of Sri Jayewardenepura, Nugegoda (Sri Lanka)

    2015-02-15

    Radical cations, dications and oxidized intermediate species of three carotenoids, namely, β-carotene, lycopene and norbixin, were generated in CH{sub 2}Cl{sub 2} solutions via chemical oxidation using anhydrous FeCl{sub 3}. UV–vis, fluorescence and fluorescence-excitation spectroscopic studies were performed to understand and compare the nature of intermediate species generated during the chemical oxidation process and subsequent degradation. The intense emission observed at 550 nm can be assigned to the S{sub 2}→S{sub 0} (1{sup 1}B{sub u}→1{sup 1}A{sub g}) transition of the carotenoid molecules. The 350 nm excitation during the oxidation process for β-carotene, lycopene and norbixin exhibit intense fluorescence peaks at 492 nm, 493 nm and 500 nm, respectively. These peaks are assigned to intermediate peroxy/epoxy compounds of the three molecules that are formed with molecular oxygen prior to the formation of oxidized short-chain stable compounds. - Highlights: • Fluorescence and UV–vis studies on β-carotene, lycopene and norbixin. • Oxidation, induced by FeCl{sub 3} in CH{sub 2}Cl{sub 2} shows blue shifted fluorescence peaks. • Fluorescence peaks were assigned to intermediate peroxy/epoxy forms of carotenoids. • The D0→D3 transition of radical cations are observed in the near IR region.

  19. Quantitative spectroscopic analysis of and distance to SN1999em

    Science.gov (United States)

    Dessart, L.; Hillier, D. J.

    2006-02-01

    Multi-epoch multi-wavelength spectroscopic observations of photospheric-phase type II supernovae (SN) provide information on massive-star progenitor properties, the core-collapse mechanism, and distances in the Universe. Following successes of recent endeavors (Dessart & Hillier 2005a, A&A, 437, 667; 2005b, A&A, 439, 671) with the non-LTE model atmosphere code CMFGEN (Hillier & Miller 1998, ApJ, 496, 407), we present a detailed quantitative spectroscopic analysis of the type II SN1999em and, using the Expanding Photosphere Method (EPM) or synthetic fits to observed spectra, à la Baron et al. (2004, ApJ, 616, 91), we estimate its distance. Selecting eight epochs, which cover the first 38 days after discovery, we obtain satisfactory fits to optical spectroscopic observations of SN1999em (including the UV and near-IR ranges when available). We use the same iron-group metal content for the ejecta, the same power-law density distribution (with exponent n = 10{-}12), and a Hubble-velocity law at all times. We adopt a H/He/C/N/O abundance pattern compatible with CNO-cycle equilibrium values for a RSG/BSG progenitor, with C/O enhanced and N depleted at later times. The overall evolution of the spectral energy distribution, whose peak shifts to longer wavelengths as time progresses, reflects the steady temperature/ionization-level decrease of the ejecta, associated non-linearly with a dramatic shift to ions with stronger line-blocking powers in the UV and optical (Fe ii, Tiii). In the parameter space investigated, CMFGEN is very sensitive and provides photospheric temperatures and velocities, reddenings, and the H/He abundance ratio with an accuracy of ±500 K, ±10%, 0.05 and 50%, respectively. Following Leonard et al. (2002, PASP, 114, 35), and their use of correction factors from Hamuy et al. (2001, ApJ, 558, 615), we estimate an EPM distance to SN1999em that also falls 30% short of the Cepheid distance of 11.7 Mpc to its host galaxy NGC 1637 (Leonard et al. 2003, Ap

  20. Ex vivo brain tumor analysis using spectroscopic optical coherence tomography

    Science.gov (United States)

    Lenz, Marcel; Krug, Robin; Welp, Hubert; Schmieder, Kirsten; Hofmann, Martin R.

    2016-03-01

    A big challenge during neurosurgeries is to distinguish between healthy tissue and cancerous tissue, but currently a suitable non-invasive real time imaging modality is not available. Optical Coherence Tomography (OCT) is a potential technique for such a modality. OCT has a penetration depth of 1-2 mm and a resolution of 1-15 μm which is sufficient to illustrate structural differences between healthy tissue and brain tumor. Therefore, we investigated gray and white matter of healthy central nervous system and meningioma samples with a Spectral Domain OCT System (Thorlabs Callisto). Additional OCT images were generated after paraffin embedding and after the samples were cut into 10 μm thin slices for histological investigation with a bright field microscope. All samples were stained with Hematoxylin and Eosin. In all cases B-scans and 3D images were made. Furthermore, a camera image of the investigated area was made by the built-in video camera of our OCT system. For orientation, the backsides of all samples were marked with blue ink. The structural differences between healthy tissue and meningioma samples were most pronounced directly after removal. After paraffin embedding these differences diminished. A correlation between OCT en face images and microscopy images can be seen. In order to increase contrast, post processing algorithms were applied. Hence we employed Spectroscopic OCT, pattern recognition algorithms and machine learning algorithms such as k-means Clustering and Principal Component Analysis.

  1. Spectroscopic analysis of biologically synthesized silver nanoparticles under clinorotation

    Science.gov (United States)

    Jagtap, Sagar; Vidyasagar, Pandit; Ghemud, Vipul; Dixit, Jyotsana

    Nanoparticles are one of the hot topics of research due to their size dependent optical, electrical and magnetic properties & their anti-bacterial and anti-fungal nature. Synthesis of nano particles can be done by various physical and chemical methods. However, Biosynthesis of nanoparticles is environment friendly, can take place around room temperature, and require little intervention or input of energy. In the present study, the synthesis of silver nanoparticles (AgNPs) using bacteria and the effect of clinorotation on rate of synthesis is discussed. The freshly grown bacterial isolate was inoculated in to 250-ml Erlenmeyer flask containing 50 ml sterile nutrient broth (LB). The cultured flasks were incubated in a shaker at 120 rpm for 24 h at 370C. Culture was centrifuged at 10,000 rpm for 10 min. The supernatant was used for carrying extracellular production of silver nanoparticles by mixing it with 5mM AgNO3 solution. The above solution was clinorotated at 2 rpm for 24 h. The synthesis was carried out at 60oC. Visual observation was conducted periodically to check for the nanoparticles formation in normal gravity as well as under clinorotation. UV-visible spectroscopic analysis showed that rate of synthesis was faster in case of clinorotated sample than control. Further, the results of FTIR and XRD characterization will be discussed.

  2. Phasor approaches simplify the analysis of tryptophan fluorescence data in protein denaturation studies

    NARCIS (Netherlands)

    Bader, A.N.; Visser, N.V.; Amerongen, van H.; Visser, A.J.W.G.

    2014-01-01

    The intrinsic fluorescence of tryptophan is frequently used to investigate the structure of proteins. The analysis of tryptophan fluorescence data is challenging: fluorescence (anisotropy) decays typically have multiple lifetime (correlation time) components and fluorescence spectra are broad and

  3. The fluorescence properties and NMR analysis of protopine and allocryptopine

    Energy Technology Data Exchange (ETDEWEB)

    Kubala, Martin, E-mail: mkubala@prfnw.upol.c [Department of Biophysics, Faculty of Science, Palacky University, tr. 17. listopadu 12, CZ-77146 Olomouc (Czech Republic); Vacek, Jan [Department of Medical Chemistry and Biochemistry, Faculty of Medicine and Dentistry, Palacky University, Hnevotinska 3, CZ-77515 Olomouc (Czech Republic); Popa, Igor [Department of Inorganic Chemistry, Faculty of Science, Palacky University, tr. 17. listopadu 12, CZ-77146 Olomouc (Czech Republic); Janovska, Marika [Department of Biophysics, Faculty of Science, Palacky University, tr. 17. listopadu 12, CZ-77146 Olomouc (Czech Republic); Kosina, Pavel; Ulrichova, Jitka [Department of Medical Chemistry and Biochemistry, Faculty of Medicine and Dentistry, Palacky University, Hnevotinska 3, CZ-77515 Olomouc (Czech Republic); Travnicek, Zdenek [Department of Inorganic Chemistry, Faculty of Science, Palacky University, tr. 17. listopadu 12, CZ-77146 Olomouc (Czech Republic); Simanek, Vilim [Department of Medical Chemistry and Biochemistry, Faculty of Medicine and Dentistry, Palacky University, Hnevotinska 3, CZ-77515 Olomouc (Czech Republic)

    2011-07-15

    The fluorescence properties of protopine and allocryptopine in aqueous and organic environments are described for the first time. The fluorescence of alkaloids and their pH-dependent interconversion to cationic forms (transannular interaction) were studied using steady-state and time-resolved fluorescence techniques. For the analysis of tricyclic base and cis/trans tetracyclic cations of the alkaloids, NMR and X-ray crystallography were used. - Highlights: {yields} We describe fundamental fluorescence characteristics of alkaloids protopine and allocryptopine. {yields} We analyzed the pH-dependent transitions and cis/trans isomerization. {yields} These two alkaloids can be better distinguished by their fluorescence decay characteristics. {yields} The fluorescence parameters are related to the NMR and crystallographic structural data.

  4. [Construction and Fluorescence Analysis of the RecombinantListeria ivanoviiStrain Expressing Green Fluorescent Protein].

    Science.gov (United States)

    Zhang, Xiang; Su, Lin; Liu, Si-Jing; Li, Yong-Yu; Jiang, Ming-Juan; Huang, Huan; Wang, Chuan

    2017-11-01

    Constructing the recombinant Listeria ivanovii strain expressing green fluorescent protein to provide an important tool for study of Listeria ivanovii. The promoter of Listeria monocytogenes Listeriolysin O ( phly ) and the green fluorescent protein (GFP) gene were fused by SOEing PCR,and then ligated the fusion gene into plasmid pCW to result in recombinant plasmid pCW- phly-GFP. Recombinant plasmid was electroporated into Listeria ivanovii ,and fluorescence microscope was used to analyze the expression of GFP. To observe the stability of recombinant plasmid and the stable expression of GFP in Listeria ivanovii ,bacteria were cultured in the BHI broth with or without erythromycin for several generations. The stability of recombinant plasmid pCW- phly-GFP and fluorescent protein in each generation of bacteriawas studied by extracting plasmids and observing fluorescence. The exactness of recombinant plasmid pCW- phly-GFP was confirmed with restrictive endonuclease assay and sequence analysis. Under the fluorescence microscope,the green fluorescence was obvious in Listeria ivanovii carried with pCW- phly-GFP. The recombinant plasmid pCW- phly-GFP was stable in Listeria ivanovii and the GFP kept expressing in a high level under the pressure of erythromycin. The prokaryotic expression plasmid pCW- phly-GFP containing GFP gene was successfully constructed. Listeria ivanovii carried with the plasmid efficiently expressed GFP. This research provides an important tool for further study of Listeria ivanovii as a vaccine carrier.

  5. Analysis of Cholesterol Trafficking with Fluorescent Probes

    DEFF Research Database (Denmark)

    Maxfield, Frederick R.; Wustner, Daniel

    2012-01-01

    Cholesterol plays an important role in determining the biophysical properties of biological membranes, and its concentration is tightly controlled by homeostatic processes. The intracellular transport of cholesterol among organelles is a key part of the homeostatic mechanism, but sterol transport...... that can bind to cholesterol to reveal its distribution in cells. We also discuss the use of intrinsically fluorescent sterols that closely mimic cholesterol, as well as some minimally modified fluorophore-labeled sterols. Methods for imaging these sterols by conventional fluorescence microscopy...... and by multiphoton microscopy are described. Some label-free methods for imaging cholesterol itself are also discussed briefly....

  6. State-of-the-Art Fluorescence Fluctuation-Based Spectroscopic Techniques for the Study of Protein Aggregation.

    Science.gov (United States)

    Kitamura, Akira; Kinjo, Masataka

    2018-03-23

    Neurodegenerative diseases, including amyotrophic lateral sclerosis (ALS), Alzheimer's disease, Parkinson's disease, and Huntington's disease, are devastating proteinopathies with misfolded protein aggregates accumulating in neuronal cells. Inclusion bodies of protein aggregates are frequently observed in the neuronal cells of patients. Investigation of the underlying causes of neurodegeneration requires the establishment and selection of appropriate methodologies for detailed investigation of the state and conformation of protein aggregates. In the current review, we present an overview of the principles and application of several methodologies used for the elucidation of protein aggregation, specifically ones based on determination of fluctuations of fluorescence. The discussed methods include fluorescence correlation spectroscopy (FCS), imaging FCS, image correlation spectroscopy (ICS), photobleaching ICS (pbICS), number and brightness (N&B) analysis, super-resolution optical fluctuation imaging (SOFI), and transient state (TRAST) monitoring spectroscopy. Some of these methodologies are classical protein aggregation analyses, while others are not yet widely used. Collectively, the methods presented here should help the future development of research not only into protein aggregation but also neurodegenerative diseases.

  7. Spectroscopic analysis applied to temperature measurement in plasmas

    International Nuclear Information System (INIS)

    Fieffe-Prevost, P.

    1978-01-01

    The plasma temperature is defined only if the plasma is in a state near thermodynamic equilibrium. This plasma state is analysed in detail and spectroscopic methods for measuring the temperature are discussed. As an application the hydrogen arc of the National Institute of Metrology of the Conservatoire National des Arts et Metiers (Paris) is briefly described [fr

  8. Spectroscopic Analysis of the Eclipsing Binary∝ CrB

    Indian Academy of Sciences (India)

    The eclipsing binary ∝ CrB, is a well-known double-lined spectroscopic binary. The system is considered unique among main-sequence systems with respect to its small mass ratio and large magnitude difference between the components. Our aim in the present paper is to compute the orbital parameters and to model the ...

  9. Spectroscopic properties with a combined approach of ab initio molecular dynamics and wavelet analysis

    Science.gov (United States)

    Pagliai, Marco; Muniz-Miranda, Francesco; Cardini, Gianni; Righini, Roberto; Schettino, Vincenzo

    2011-05-01

    In order to extract spectroscopic information from trajectories obtained by classical or ab initio molecular dynamics simulations, usually Fourier transforms are employed. In recent years wavelet transforms have been shown to be a valid alternative tool to analyze time-series, due to their capability of localizing a signal both in time and frequency. In this article wavelet transforms are applied for the analysis of Car-Parrinello molecular dynamics simulations to the purpose of time-correlating structural and spectroscopic properties of methyl acetate dissolved in water and methanol. The results demonstrate the possibility of obtaining information that may be of valuable help in the interpretation of time-resolved spectroscopic data.

  10. [Spectroscopic analysis of Nd:GGG laser crystal].

    Science.gov (United States)

    Zeng, Fan-ming; Zhang, Ying; Sun, Jing; Liu, Jing-he

    2009-05-01

    Neodymium-doped gadolinium gallium garnet (Nd:GGG)crystal is the best operation material of solid-state heat-capacity laser. In the present paper, Nd:GGG single crystal was grown by Czochralski (Cz) method. Fluorescence spectra and absorption spectra were measured. At the same time, the spectral parameters of Nd:GGG laser crystal were calculated by Judd-Ofelt theory, including absorption and emission cross-section, intensity parameters, radiative transition probability, fluorescence branch ratio and fluorescent lifetime. According to the measurement and calculation of absorption spectra, it is illustrated that the main absorption peak of Nd: GGG crystal was at near 808 nm, the absorption cross section of the main peak at 808 nm sigma abs, was equal to 4. 35 x 10(-20) cm2. The FWHM of absorption line-width was equal to 8 nm, and the absorption intensity became stronger with the increase in Nd3+ ions concentration. According to the measurement and calculation of fluorescence spectra, the fluorescence emission peak was at near 1062 nm, which corresponds to 4F(3/2) - 4(I(11/2) emission band of Nd3+ ions. The radiative transition probabilityof the main emission peak at 1062 nm A(jj') was equal to 1 832.01 s(-1). The fluorescence branch ratio betajj was equal to 45.07%. The fluorescence lifetime r was equal to 250 micros. The stimulated emission cross section sigma(lamda) was equal to 21.58 x 10(-20) cm2. The laser operationof 4F(3/2) - 4I(11/2) transition can be realized due to the larger fluorescence branch ratio and stimulated emission cross section

  11. X-ray fluorescent elemental analysis. Ch. 16

    International Nuclear Information System (INIS)

    Baryshev, V.; Kulipanov, G.; Skrinsky, A.

    1991-01-01

    X-ray fluorescence analysis (XFA) is used worldwide to define a quantitative content of the elements as well as to visualize the distribution of elements in different regions (element mapping). Utilization of synchrotron radiation (SR) to excite X-ray fluorescence enables the XFA method to be qualitatively improved. This chapter reviews the experimental work in especially the last decade (author). 71 refs.; 24 figs.; 3 tabs

  12. Gold nephropathy: tissue analysis by x-ray fluorescent spectroscopy

    International Nuclear Information System (INIS)

    Viol, G.W.; Minielly, J.A.; Bistricki, T.

    1977-01-01

    Three patients developed proteinuria following gold therapy for rheumatoid arthritis. The clinical syndrome was a self-limiting proteinuria with normal renal function. By light and electron microscopic appearances the renal lesion was an epimembranous deposit form of membranous glomerulopathy. Immunofluorescent study showed granular deposits of IgG and C3 complement along glomerular basement membranes. By X-ray fluorescent spectroscopic examination, gold was seen to be present within the proximal convoluted tubular cells but was not identified in the glomerular subepithelial deposits. These findings are consistent with an immune-complex form of glomerulopathy in which gold is neither the antigen nor a hapten in the glomerular deposits, and they suggest the hypothesis that antibodies to tubular epithelial antigens induced by gold therapy may be a causative factor in the renal disease associated with gold therapy in rheumatoid arthritis

  13. A single-chip computer analysis system for liquid fluorescence

    International Nuclear Information System (INIS)

    Zhang Yongming; Wu Ruisheng; Li Bin

    1998-01-01

    The single-chip computer analysis system for liquid fluorescence is an intelligent analytic instrument, which is based on the principle that the liquid containing hydrocarbons can give out several characteristic fluorescences when irradiated by strong light. Besides a single-chip computer, the system makes use of the keyboard and the calculation and printing functions of a CASIO printing calculator. It combines optics, mechanism and electronics into one, and is small, light and practical, so it can be used for surface water sample analysis in oil field and impurity analysis of other materials

  14. Research Note: Energy dispersive x-ray fluorescence analysis ...

    African Journals Online (AJOL)

    Energy Dispersive X-Ray fluorescence (EDXRF) technique for the analysis of geological, biological and environmental samples is described. The technique has been applied in the analysis of 10 (geological, biological, environmental) standard reference materials. The accuracy and precision of the technique were attested ...

  15. Spectroscopic quantification of 5-hydroxymethylcytosine in genomic DNA using boric acid-functionalized nano-microsphere fluorescent probes.

    Science.gov (United States)

    Chen, Hua-Yan; Wei, Jing-Ru; Pan, Jiong-Xiu; Zhang, Wei; Dang, Fu-Quan; Zhang, Zhi-Qi; Zhang, Jing

    2017-05-15

    5-hydroxymethylcytosine (5hmC) is the sixth base of DNA. It is involved in active DNA demethylation and can be a marker of diseases such as cancer. In this study, we developed a simple and sensitive 2-(4-boronophenyl)quinoline-4-carboxylic acid modified poly (glycidyl methacrylate (PBAQA-PGMA) fluorescent probe to detect the 5hmC content of genomic DNA based on T4 β-glucosyltransferase-catalyzed glucosylation of 5hmC. The fluorescence-enhanced intensity recorded from the DNA sample was proportional to its 5-hydroxymethylcytosine content and could be quantified by fluorescence spectrophotometry. The developed probe showed good detection sensitivity and selectivity and a good linear relationship between the fluorescence intensity and the concentration of 5 hmC within a 0-100nM range. Compared with other fluorescence detection methods, this method not only could determine trace amounts of 5 hmC from genomic DNA but also could eliminate the interference of fluorescent dyes and the need for purification. It also could avoid multiple labeling. Because the PBAQA-PGMA probe could enrich the content of glycosyl-5-hydroxymethyl-2-deoxycytidine from a complex ground substance, it will broaden the linear detection range and improve sensitivity. The limit of detection was calculated to be 0.167nM after enrichment. Furthermore, the method was successfully used to detect 5-hydroxymethylcytosine from mouse tissues. Copyright © 2016 Elsevier B.V. All rights reserved.

  16. CHLOROPHYLL a FLUORESCENCE ANALYSIS IN FORESTS

    Directory of Open Access Journals (Sweden)

    M. Pollastrini

    2016-03-01

    Full Text Available A European-wide assessment of chlorophyll a fluorescence (ChlF, prompt fluorescence on dark-adapted samples parameters in forest ecosystems was carried out in the years 2012-2013, within the 7FP FunDivEUROPE project. A total of 1596 trees growing in 209 stands distributed in six countries, from Mediterranean to boreal sites, were sampled. This paper shows the applicability of the ChlF in forest ecology surveys, the protocols adopted for leaf sampling and ChlF measurements, the variability of the ChlF parameters within and between trees, their dependence to environmental factors and the relationships with other functional leaf traits. The most relevant findings were as follows: (i The least variable ChlF parameter within and between the trees was the maximum quantum yield of primary photochemistry (FV/FM, whereas the performance indices (PIABS and PITOT showed the highest variability; (ii for a given tree, the ChlF parameters measured at two heights of the crown (top and bottom leaves were correlated and, in coniferous species, the ChlF parameters were correlated between different needle age classes (from the current year and previous year; (iii the ChlF parameters showed a geographical pattern, and the photochemical performance of the forest trees was higher in central Europe than in the edge sites (northernmost and southernmost; and (iv ChlF parameters showed different sensitivity to specific environmental factors: FV/FM increased with the increase of the leaf area index of stands and soil fertility; ΔVIP was reduced under high temperature and drought. The photochemical responses of forest tree species, analyzed with ChlF parameters, were influenced by the ecology of the trees (i.e. their functional groups, continental distribution, successional status, etc., tree species’ richness and composition of the stands. Our results support the applicability and usefulness of the ChlF in forest monitoring investigations on a large spatial scale and

  17. Spectroscopic Tools for Quantitative Studies of DNA Structure and Dynamics

    DEFF Research Database (Denmark)

    Preus, Søren

    The main objective of this thesis is to develop quantitative fluorescence-based, spectroscopic tools for probing the 3D structure and dynamics of DNA and RNA. The thesis is founded on six peer-reviewed papers covering mainly the development, characterization and use of fluorescent nucleobase...... analogues. In addition, four software packages is presented for the simulation and quantitative analysis of time-resolved and steady-state UV-Vis absorption and fluorescence experiments....

  18. Synchronous fluorescence spectroscopy for analysis of wine and wine distillates

    Science.gov (United States)

    Andreeva, Ya.; Borisova, E.; Genova, Ts.; Zhelyazkova, Al.; Avramov, L.

    2015-01-01

    Wine and brandies are multicomponent systems and conventional fluorescence techniques, relying on recording of single emission or excitation spectra, are often insufficient. In such cases synchronous fluorescence spectra can be used for revealing the potential of the fluorescence techniques. The technique is based on simultaneously scanning of the excitation and emission wavelength with constant difference (Δλ) maintained between them. In this study the measurements were made using FluoroLog3 spectrofluorimeter (HORIBA Jobin Yvon, France) and collected for excitation and emission in the wavelength region 220 - 700 nm using wavelength interval Δλ from 10 to 100 nm in 10 nm steps. This research includes the results obtained for brandy and red wine samples. Fluorescence analysis takes advantage in the presence of natural fluorophores in wines and brandies, such as gallic, vanillic, p-coumaric, syringic, ferulic acid, umbelliferone, scopoletin and etc. Applying of synchronous fluorescence spectroscopy for analysis of these types of alcohols allows us to estimate the quality of wines and also to detect adulteration of brandies like adding of a caramel to wine distillates for imitating the quality of the original product aged in oak casks.

  19. The fluorescence spectroscopic study on the interaction between imidazo[2,1-b]thiazole analogues and bovine serum albumin

    Science.gov (United States)

    Yu, Xianyong; Yang, Ying; Shiyu, Lu; Yao, Qing; Heting, Liu; Xiaofang, Li; Pinggui, Yi

    2011-12-01

    The interaction between imidazo[2,1-b]thiazole (IMTZ) and bovine serum albumin (BSA) was analyzed by fluorescence and ultraviolet spectroscopy at 302 and 310 K under simulative physiological conditions. The results show that IMTZ can effectively quench the intrinsic fluorescence of BSA via static and dynamic quenching. The binding constant, binding sites of IMTZ with BSA were calculated. According to the Förster non-radiation energy transfer theory, the average binding distance between IMTZ and BSA was obtained. What's more, the synchronous fluorescence spectra indicated that the conformation of BSA has been changed. The results provided the information for the binding of IMTZ to BSA, and the influences of substituent group on the interaction were also discussed.

  20. Two dimensional laser induced fluorescence in the gas phase: a spectroscopic tool for studying molecular spectroscopy and dynamics

    Science.gov (United States)

    Gascooke, Jason R.; Lawrance, Warren D.

    2017-11-01

    Two dimensional laser induced fluorescence (2D-LIF) extends the usual laser induced fluorescence technique by adding a second dimension, the wavelength at which excited states emit, thereby significantly enhancing the information that can be extracted. It allows overlapping absorption features, whether they arise from within the same molecule or from different molecules in a mixture, to be associated with their appropriate "parent" state and/or molecule. While the first gas phase version of the technique was published a decade ago, the technique is in its infancy, having been exploited by only a few groups to date. However, its potential in gas phase spectroscopy and dynamics is significant. In this article we provide an overview of the technique and illustrate its potential with examples, with a focus on those utilising high resolution in the dispersed fluorescence dimension.

  1. Study of fluorescence interaction and conformational changes of bovine serum albumin with histamine H₁ -receptor--drug epinastine hydrochloride by spectroscopic and time-resolved fluorescence methods.

    Science.gov (United States)

    Ariga, Girish G; Naik, Praveen N; Nandibewoor, Sharanappa T; Chimatadar, Shivamurti A

    2015-11-01

    The fluorescence, ultraviolet (UV) absorption, time resolved techniques, circular dichroism (CD), and infrared spectral methods were explored as tools to investigate the interaction between histamine H1 drug, epinastine hydrochloride (EPN), and bovine serum albumin (BSA) under simulated physiological conditions. The experimental results showed that the quenching of the BSA by EPN was static quenching mechanism and also confirmed by lifetime measurements. The value of n close to unity indicated that one molecule of EPN was bound to protein molecule. The binding constants (K) at three different temperatures were calculated (7.1 × 10(4), 5.5 × 10(4), and 3.9 × 10(4) M(-1)). Based on the thermodynamic parameters (ΔH(0), ΔG(0), and ΔS(0)), the nature of binding forces operating between drug and protein was proposed. The site of binding of EPN in the protein was proposed to be Sudlow's site I based on displacement experiments using site markers viz, warfarin, ibuprofen, and digitoxin. Based on the Förster's theory of non-radiation energy transfer, the binding average distance, r between the donor (BSA) and acceptor (EPN) was evaluated and found to be 4.48 nm. The UV-visible, synchronous fluorescence, CD, and three-dimensional fluorescence spectral results revealed the changes in secondary structure of the protein upon its interaction with EPN. © 2015 Wiley Periodicals, Inc.

  2. Ultraviolet emission and excitation fluorescence spectroscopic characterization of DMBA-treated Swiss Albino mice skin carcinogenesis for measuring tissue transformation

    Science.gov (United States)

    Aruna, Prakasa R.; Hemamalini, Srinivasan; Ebenezar, Jeyasingh; Ganesan, Singaravelu

    2002-05-01

    The ultraviolet fluorescence emission spectra of skin tissues under different pathological conditions were measured at 280nm excitation. At this excitation wavelength, the normal skin showed a primary peak emission at 352nm and this primary peak emission from neoplastic skin shows a blue shift with respect to normal tissue. This blue shift increases as the stage of abnormality increases and it is maximum (19nm) for well-differentiated squamous cell carcinoma. This alteration is further confirmed from fluorescence excitation spectra of the tissues for 340nm emission. The study concludes that the change in the emission of tryptophan around 340nm may be due to partial unfolding of protein.

  3. Synthesis, characterization, in silico ADMET prediction, and protein binding analysis of a novel zinc(II) Schiff-base complex: Application of multi-spectroscopic and computational techniques.

    Science.gov (United States)

    Shahraki, Somaye; Shiri, Fereshteh; Saeidifar, Maryam

    2017-06-22

    By reaction of 1,2-diaminocyclohexane with the 2,3-butanedione monoxime in the presence of ZnCl 2 , a new Schiff base complex was obtained. This complex was characterized by elemental analyses, FT-IR, 1 H NMR, UV-Vis, and conductivity measurements. The reactivity of this complex to human serum albumin (HSA) under simulative physiological conditions was studied by spectroscopic and molecular docking analysis. Experimental results at various temperatures indicated that the intrinsic fluorescence of protein was quenched through a static quenching mechanism. The negative value of enthalpy change and positive value of entropy change indicated that both hydrogen bonding and hydrophobic forces played a major role in the binding of Zn(II) complex to HSA. FT-IR, three-dimensional fluorescence, and UV-Vis absorption results showed that the secondary structure of HSA changed after Zn(II) complex bound to protein. The binding distance was calculated to be 4.96 nm, according to fluorescence resonance energy transfer. Molecular docking results confirmed the spectroscopic results and showed that above complex is embedded into subdomain IIA of protein. All these experimental and computational results clarified that Zn(II) complex could bind with HSA effectively, which could be a useful guideline for efficient Schiff-base drug design.

  4. X-ray fluorescence spectrometry applied to soil analysis

    International Nuclear Information System (INIS)

    Salvador, Vera Lucia Ribeiro; Sato, Ivone Mulako; Scapin Junior, Wilson Santo; Scapin, Marcos Antonio; Imakima, Kengo

    1997-01-01

    This paper studies the X-ray fluorescence spectrometry applied to the soil analysis. A comparative study of the WD-XRFS and ED-XRFS techniques was carried out by using the following soil samples: SL-1, SOIL-7 and marine sediment SD-M-2/TM, from IAEA, and clay, JG-1a from Geological Survey of Japan (GSJ)

  5. TRANES analysis of the fluorescence of nile red in organized ...

    Indian Academy of Sciences (India)

    Unknown

    Abstract. Time-resolved area normalized emission spectroscopy (TRANES) is a new method for the analysis of fluorescence of dyes in complex chemical and biological systems (A S R Koti, M M G Krishna and N Periasamy, 2001, J. Phys. Chem. 105, 1767). The model-free method extends the power of time-resolved.

  6. A comparative analysis of green fluorescent protein and β ...

    Indian Academy of Sciences (India)

    Srinivas

    comparative analysis of two reporter genes, β-glucuronidase (gus) and green fluorescent protein (sgfp), for studying the temporal expression pattern of ..... each graph represents the mean of readings from 8 independent single-copy transgenic lines and the bars represent the standard errors. A9-gus. TA29-gus. A9-sgfp.

  7. Mercury mass measurement in fluorescent lamps via neutron activation analysis

    Czech Academy of Sciences Publication Activity Database

    Viererbl, L.; Vinš, M.; Lahodová, Z.; Fuksa, A.; Kučera, Jan; Koleska, M.; Voljanskij, A.

    2015-01-01

    Roč. 116, NOV (2015), s. 56-59 ISSN 0969-806X R&D Projects: GA TA ČR TA01010237; GA MŠk LM2011019 Institutional support: RVO:61389005 Keywords : fluorescent lamp * mercury measurement * neutron activation analysis * research reactor Subject RIV: BG - Nuclear, Atomic and Molecular Physics, Colliders Impact factor: 1.207, year: 2015

  8. Can spectroscopic analysis improve our understanding of biogeochemical processes in agricultural streams?

    Science.gov (United States)

    Bieroza, Magdalena; Heathwaite, Ann Louise

    2015-04-01

    In agricultural catchments diffuse fluxes of nutrients, mainly nitrogen (N) and phosphorus (P) from arable land and livestock are responsible for pollution of receiving waters and their eutrophication. Organic matter (OM) can play an important role in mediating a range of biogeochemical processes controlling diffuse pollution in streams and at their interface with surrounding land in the riparian and hyporheic zones. Thus, a holistic and simultaneous monitoring of N, P and OM fractions can help to improve our understanding of biogeochemical functioning of agricultural streams. In this study we build on intensive in situ monitoring of diffuse pollution in a small agricultural groundwater-fed stream in NW England carried out since 2009. The in situ monitoring unit captures high-frequency (15 minutes to hourly) responses of water quality parameters including total phosphorus, total reactive phosphorus and nitrate-nitrogen to changing flow conditions. For two consecutive hydrological years we have carried out additional spectroscopic water analyses to characterise organic matter components and their interactions with nutrient fractions. Automated and grab water samples have been analysed using ultraviolet-visible (UV-Vis) absorbance and excitation-emission (EEM) fluorescence spectroscopy. In addition, a tryptophan sensor was trialled to capture in situ fluorescence dynamics. Our paper evaluates patterns in nutrient and OM responses to baseflow and storm flow conditions and provides an assessment of storage-related changes of automated samples and temperature and turbidity effects on in situ tryptophan measurements. The paper shows the value of spectroscopic measurements to understand biogeochemical and hydrological nutrient dynamics and quantifies analytical uncertainty associated with both laboratory-based and in situ spectroscopic measurements.

  9. Moving Towards a Technical Specification for Fluorescence Excitation-Emission Mapping and Absorbance Analysis of Colored Dissolved Organic Matter

    Science.gov (United States)

    Gilmore, A. M.

    2010-12-01

    Colored dissolved organic matter (CDOM) measurements with fluorescence and absorbance are important for evaluating a wide variety natural and industrial water sources. However, uncertainties and ambiguities continue to be propagated regarding interpretation of CDOM spectral data due to the variety of instruments, sampling chemistry conditions and types of analysis algorithms. Recent efforts have focused on standardization and interlaboratory comparisons of CDOM samples with respect to preparation, spectroscopic evaluation and mathematical analysis. This study deals with correlating absorbance and fluorescence data measured with the same sample to minimize interlaboratory variation. The theoretical significance of true simultaneous acquisition of the corrected (NIST Traceable) absorbance spectrum and fluorescence excitation spectral profile and excitation emission map is discussed as a means to provide the least ambiguous spectral data. Key issues considered are the variations introduced by ‘serial’ acquisitions of absorbance and fluorescence data. Variation can be caused by the different light-exposure history (especially UV) in the instruments, dissolved oxygen content associated with temperature changes and oxidation kinetics of the CDOM and in many cases concentration- and pH-related changes associated with diluting and pH buffering of the CDOM sample, respectively. Concentration changes in CDOM can be associated with optical anomalies including self-quenching and -absorption which systematically alter the fluorescence spectrum. Clearly, monitoring the absorbance and fluorescence simultaneously would deal with the above sampling variations and facilitate correcting the absorbance based fluorescence anomalies. The proposed method(s) described will be discussed in view of their potential to serve as the basis for an international technical specification in terms of the optical instrument and sampling conditions for CDOM analysis and reporting.

  10. A critical study on the interactions of hesperitin with human hemoglobin: Fluorescence spectroscopic and molecular modeling approach

    Energy Technology Data Exchange (ETDEWEB)

    Chakraborty, Sandipan [Saroj Mohan Institute of Technology, Hooghly (India); Chaudhuri, Sudip; Pahari, Biswapathik [Biophysics Division, Saha Institute of Nuclear Physics, Kolkata 700064 (India); Taylor, Jasmine [Chemistry Department, Tougaloo College, Tougaloo, MS 39174 (United States); Sengupta, Pradeep K. [Biophysics Division, Saha Institute of Nuclear Physics, Kolkata 700064 (India); Sengupta, Bidisha, E-mail: bsengupta@tougaloo.edu [Chemistry Department, Tougaloo College, Tougaloo, MS 39174 (United States)

    2012-06-15

    Hesperitin, a ubiquitous bioactive flavonoid abundant in citrus fruits is known to possess antioxidant, anti-carcinogenic, hypolipidemic, vasoprotective and other important therapeutic properties. Here we have explored the interactions of hesperitin with normal human hemoglobin (HbA), using steady state and time resolved fluorescence spectroscopy, far UV circular dicroism (CD) spectroscopy, combined with molecular modeling computations. Specific interaction of the flavonoid with HbA is confirmed from flavonoid-induced static quenching which is evident from steady state fluorescence as well as lifetime data. Both temperature dependent fluorescence measurements and molecular docking studies reveal that apart from hydrogen bonding and van der Waals interactions, electrostatic interactions also play crucial role in hesperitin-HbA interactions. Furthermore, electrostatic surface potential calculations indicate that the hesperitin binding site in HbA is intensely positive due to the presence of several lysine and histidine residues. - Highlights: Black-Right-Pointing-Pointer Absorption spectra of hesperitin bound HbA indicates ground state complex formation. Black-Right-Pointing-Pointer Binding induces static quenching of intrinsic fluorescence of the tryptophan of HbA. Black-Right-Pointing-Pointer Molecular docking and electrostatic surface potential calculations were performed. Black-Right-Pointing-Pointer Contrasting binding modes of hesperitin compared to other flavonoids were observed.

  11. Sensitive spectroscopic detection of large and denatured protein aggregates in solution by use of the fluorescent dye Nile re

    NARCIS (Netherlands)

    Sutter, M.; Oliveira, S.; Sanders, N.N.; Lucas, B.; Hoek, van A.; Hink, M.A.; Visser, A.J.W.G.; Smedt, de S.C.; Hennink, W.E.; Jiskoot, W.

    2007-01-01

    The fluorescent dye Nile red was used as a probe for the sensitive detection of large, denatured aggregates of the model protein ß-galactosidase (E. coli) in solution. Aggregates were formed by irreversible heat denaturation of ß-galactosidase below and above the protein¿s unfolding temperature of

  12. Insights into accelerated liposomal release of topotecan in plasma monitored by a non-invasive fluorescence spectroscopic method

    Science.gov (United States)

    Fugit, Kyle D.; Jyoti, Amar; Upreti, Meenakshi; Anderson, Bradley D.

    2014-01-01

    A non-invasive fluorescence method was developed to monitor liposomal release kinetics of the anticancer agent topotecan (TPT) in physiological fluids and subsequently used to explore the cause of accelerated release in plasma. Analyses of fluorescence excitation spectra confirmed that unencapsulated TPT exhibits a red shift in its spectrum as pH is increased. This property was used to monitor TPT release from actively loaded liposomal formulations having a low intravesicular pH. Mathematical release models were developed to extract reliable rate constants for TPT release in aqueous solutions monitored by fluorescence and release kinetics obtained by HPLC. Using the fluorescence method, accelerated TPT release was observed in plasma as previously reported in the literature. Simulations to estimate the intravesicular pH were conducted to demonstrate that accelerated release correlated with alterations in the low intravesicular pH. This was attributed to the presence of ammonia in plasma samples rather than proteins and other plasma components generally believed to alter release kinetics in physiological samples. These findings shed light on the critical role that ammonia may play in contributing to the preclinical/clinical variability and performance seen with actively-loaded liposomal formulations of TPT and other weakly-basic anticancer agents. PMID:25456833

  13. A critical study on the interactions of hesperitin with human hemoglobin: Fluorescence spectroscopic and molecular modeling approach

    International Nuclear Information System (INIS)

    Chakraborty, Sandipan; Chaudhuri, Sudip; Pahari, Biswapathik; Taylor, Jasmine; Sengupta, Pradeep K.; Sengupta, Bidisha

    2012-01-01

    Hesperitin, a ubiquitous bioactive flavonoid abundant in citrus fruits is known to possess antioxidant, anti-carcinogenic, hypolipidemic, vasoprotective and other important therapeutic properties. Here we have explored the interactions of hesperitin with normal human hemoglobin (HbA), using steady state and time resolved fluorescence spectroscopy, far UV circular dicroism (CD) spectroscopy, combined with molecular modeling computations. Specific interaction of the flavonoid with HbA is confirmed from flavonoid-induced static quenching which is evident from steady state fluorescence as well as lifetime data. Both temperature dependent fluorescence measurements and molecular docking studies reveal that apart from hydrogen bonding and van der Waals interactions, electrostatic interactions also play crucial role in hesperitin-HbA interactions. Furthermore, electrostatic surface potential calculations indicate that the hesperitin binding site in HbA is intensely positive due to the presence of several lysine and histidine residues. - Highlights: ► Absorption spectra of hesperitin bound HbA indicates ground state complex formation. ► Binding induces static quenching of intrinsic fluorescence of the tryptophan of HbA. ► Molecular docking and electrostatic surface potential calculations were performed. ► Contrasting binding modes of hesperitin compared to other flavonoids were observed.

  14. Detection and Monitoring of Neurotransmitters - a Spectroscopic Analysis

    Science.gov (United States)

    Manciu, Felicia; Lee, Kendall; Durrer, William; Bennet, Kevin

    2012-10-01

    In this work we demonstrate the capability of confocal Raman mapping spectroscopy for simultaneously and locally detecting important compounds in neuroscience such as dopamine, serotonin, and adenosine. The Raman results show shifting of the characteristic vibrations of the compounds, observations consistent with previous spectroscopic studies. Although some vibrations are common in these neurotransmitters, Raman mapping was achieved by detecting non-overlapping characteristic spectral signatures of the compounds, as follows: for dopamine the vibration attributed to C-O stretching, for serotonin the indole ring stretching vibration, and for adenosine the adenine ring vibrations. Without damage, dyeing, or preferential sample preparation, confocal Raman mapping provided positive detection of each neurotransmitter, allowing association of the high-resolution spectra with specific micro-scale image regions. Such information is particularly important for complex, heterogeneous samples, where modification of the chemical or physical composition can influence the neurotransmission processes. We also report an estimated dopamine diffusion coefficient two orders of magnitude smaller than that calculated by the flow-injection method.

  15. Quantitative comparison of analysis methods for spectroscopic optical coherence tomography: reply to comment

    NARCIS (Netherlands)

    Bosschaart, Nienke; van Leeuwen, Ton G.; Aalders, Maurice C. G.; Faber, Dirk J.

    2014-01-01

    We reply to the comment by Kraszewski et al on "Quantitative comparison of analysis methods for spectroscopic optical coherence tomography." We present additional simulations evaluating the proposed window function. We conclude that our simulations show good qualitative agreement with the results of

  16. Quantitative comparison of analysis methods for spectroscopic optical coherence tomography: reply to comment

    NARCIS (Netherlands)

    Bosschaart, Nienke; van Leeuwen, Ton; Aalders, Maurice C.G.; Faber, Dirk

    2014-01-01

    We reply to the comment by Kraszewski et al on “Quantitative comparison of analysis methods for spectroscopic optical coherence tomography.” We present additional simulations evaluating the proposed window function. We conclude that our simulations show good qualitative agreement with the results of

  17. Ultraviolet-Visible (UV-Vis) and Fluorescence Spectroscopic Investigation of the Interactions of Ionic Liquids and Catalase.

    Science.gov (United States)

    Dong, Xing; Fan, Yunchang; Yang, Peng; Kong, Jichuan; Li, Dandan; Miao, Juan; Hua, Shaofeng; Hu, Chaobing

    2016-11-01

    The inhibitory effects of nine ionic liquids (ILs) on the catalase activity were investigated using fluorescence, absorption ultraviolet-visible spectroscopy. The interactions of ILs and catalase on the molecular level were studied. The experimental results indicated that ILs could inhibit the catalase activity and their inhibitory abilities depended on their chemical structures. Fluorescence experiments showed that hydrogen bonding played an important role in the interaction process. The inhibitory abilities of ILs on catalase activity could be simply described by their hydrophobicity and hydrogen bonding abilities. Unexpected less inhibitory effects of trifluoromethanesulfonate (TfO - ) might be ascribed to its larger size, which makes it difficult to go through the substrate channel of catalase to the active site. © The Author(s) 2016.

  18. Sensing NADH conformation using phasor analysis on fluorescence spectra

    Science.gov (United States)

    Palo, Dylan; Maltas, Jeff; Risal, Laxmi; Urayama, Paul

    2017-11-01

    Phasor analysis on fluorescence signals is a sensitive approach for analyzing multicomponent systems. Initially developed for time-resolved measurements, a spectral version has been used for the rapid identification of regions during the spectral imaging of biological systems. Here we show that quantitative information regarding conformation can be obtained from phasor analysis of fluorescence spectrum shape. Methanol denaturation of NADH and NADH binding to various dehydrogenase proteins are used as model reactions. Thermodynamic constants are calculated and compared with previous studies based on more direct measures of conformation. Next, the quantitative monitoring of UV-excited autofluorescence spectrum shape during chemically-induced metabolic transitions is presented and discussed in terms of NADH-utilizing pathways. Results show how phasor analysis is useful in assessing two-state behavior, and in interpreting autofluorescence as emission from an ensemble of cellular NADH forms.

  19. Raman spectroscopic analysis of Mexican natural artists' materials

    Science.gov (United States)

    Vandenabeele, Peter; Ortega-Avilès, Mayahuel; Castilleros, Dolores Tenorio; Moens, Luc

    2007-12-01

    This work represents the Raman spectra of 15 natural artists' materials that were obtained from local market in Mexico. Some of these products are not endemic to the region, but are often used in local conservation practice. Other materials are of local origin and have been used for centuries by local craftsmen. The Raman spectra that are reported here are: Chia oil, linseed oil, Campeche wax, beeswax, white copal, dammar, colophony, mastic, pixoy, chapopote, chucum, aje gum, gutta gum, peach gum and gum Arabic. The sample of pixoy was mixed with TiO 2, although it was not clear whether this was done intentionally or not. The Raman spectrum of chapopote, the local name for bitumen, contained features of carbonaceous and terpenoid matter. The Raman spectra of chapopote and chucum suffered severely from fluorescence, resulting in noisy Raman spectra. Aje gum and gutta gum are not gums, since they are resinous (terpenoid) in nature. Aje is a rare animal resin originating from Coccus axin.

  20. A combined experimental and theoretical approach for structural, spectroscopic, NLO, NBO, thermal and photophysical studies of new fluorescent 5-amino-1-(7-chloroquinolin-4-yl)-1H-1,2,3-triazole-4-carbonitrile using density functional theory

    Science.gov (United States)

    Singh, Harjinder; Singh, Ashima; Khurana, J. M.

    2017-11-01

    We have synthesized a new fluorescent 5-amino-1-(7-chloroquinolin-4-yl)-1H-1,2,3-triazole-4-carbonitrile containing 1,2,3-triazole moiety. The properties such as optimized structural parameters, spectroscopic (FT-IR and NMR), electronic and photophysical properties were investigated experimentally as well as theoretically using density functional theory calculations. The NMR spectrum was recorded in DMSO and the chemical shifts of hydrogen and carbon atoms were studied experimentally as well as theoretically. Electronic properties of molecule such as electrostatic surface potential analysis, charge analysis, the frontier molecular orbital analysis, total density of states, absorption-emission characteristics of molecule were studied. Nonlinear optical properties, reduced density gradient and natural bond orbital analysis were also studied. The first order hyperpolarizability (β0) was calculated and found to be six times higher than urea which makes it a potential NLO material. This new compound showed absorption spectra at 326-386 nm while emission band in range of 375-403 nm in different solvents. The ground state and excited state dipole moments were determined using solvatochromic methods and compared with theoretically calculated values. The interaction of synthesized compound with different solvents was also investigated using Kamlet-Taft and Catalan methods. The chemical reactivity indices and thermodynamic properties were also evaluated.

  1. Pyrene conjugation and spectroscopic analysis of hydroxypropyl methylcellulose compounds successfully demonstrated a local dielectric difference associated with in vivo anti-prion activity.

    Directory of Open Access Journals (Sweden)

    Kenta Teruya

    Full Text Available Our previous study on prion-infected rodents revealed that hydroxypropyl methylcellulose compounds (HPMCs with different molecular weights but similar composition and degree of substitution have different levels of long-lasting anti-prion activity. In this study, we searched these HPMCs for a parameter specifically associated with in vivo anti-prion activity by analyzing in vitro chemical properties and in vivo tissue distributions. Infrared spectroscopic and thermal analyses revealed no differences among HPMCs, whereas pyrene conjugation and spectroscopic analysis revealed that the fluorescence intensity ratio of peak III/peak I correlated with anti-prion activity. This correlation was more clearly demonstrated in the anti-prion activity of the 1-year pre-infection treatment than that of the immediate post-infection treatment. In addition, the intensity ratio of peak III/peak I negatively correlated with the macrophage uptake level of HPMCs in our previous study. However, the in vivo distribution pattern was apparently not associated with anti-prion activity and was different in the representative tissues. These findings suggest that pyrene conjugation and spectroscopic analysis are powerful methods to successfully demonstrate local dielectric differences in HPMCs and provide a feasible parameter denoting the long-lasting anti-prion activity of HPMCs in vivo.

  2. Towards Environmental Microbial Analysis with Deep UV fluorescence and Raman Spectroscopy

    Science.gov (United States)

    Wanger, G.; Bhartia, R.; Orphan, V. J.; Rowe, A. R.

    2015-12-01

    The study of microbes from the environment is often facilitated by the fixation of samples prior to analyses in the laboratory. Samples not appropriately preserved can show dramatic changes e.g. unwanted growth, loss of biomass and sample degradation between collection and analysis. To move Deep-UV Raman analyses from model lab organisms to environmental samples the effect of preservation must be evaluated. Deep UV Raman and Fluorescence (i.e. excitation discriminating various types of microbes as well as giving some information on the growth stage of the culture. The fluorescence signal is typically 3-4 orders of magnitude more intense than the Raman signal and enables rapid location of bacteria on a surface and crudely split them into categories. However it suffers from broad spectral features making discrete classification of bacteria problematic. While a far weaker phenomenon, the chemical specificity of Raman spectroscopy has been shown capable of discriminating between different bacterial species and has even shown spectral variation in same species under differing growth conditions or growth stages and has even been used to measure microbial activity by measuring the incorporation of stable isotope labeled substrates. Typically these analyses are carried out on well-studied, lab-grown model organisms and while relatively easy, these analyses are performed on cells grow under non-environmentally relevant conditions using rich media types not often found in nature. Here we show the effect on the Raman and fluorescence signal (248 nm Deep-UV excitation) from E. coli and other bacteria, grown in more nutrient limited environments, and fixed/preserved in ethanol, PFA and formalin. These fixatives not only preserve the cells for spectroscopic analysis but are compatible with many common techniques that can be used for further characterization of environmental microbial samples. Ethanol appears to heavily degrade the signals from both Raman and fluorescence while

  3. [Parallel factor analysis as an analysis technique for the ratio of three-dimensional fluorescence peak in Taihu Lake].

    Science.gov (United States)

    Zhu, Peng; Liao, Hai-qing; Hua, Zu-lin; Xie, Fa-zhi; Tang, Zhi; Zhang, Liang

    2012-01-01

    The present paper proposes a new method to find the ratio of three-dimensional fluorescence peak. At first, the excitation-emission fluorescence matrix of water samples was treated with parallel factor analysis (PARAFAC) and then fluorescence peaks intensity and ratio of fluorescence peak were obtained from the parallel factor analysis model. From the parallel factor analysis model, the same fluorescence peaks of different water samples lie at the same excitation-emission wavelength and the overlap of different fluorescence peaks of the same water sample is reduced. Analysing regional characteristic in Taihu Lake, the ratio of factor score and the ratio of fluorescence peak showed strong correlation.

  4. Spectroscopic analysis on the binding interaction of biologically active pyrimidine derivative with bovine serum albumin

    Directory of Open Access Journals (Sweden)

    Vishwas D. Suryawanshi

    2016-02-01

    Full Text Available A biologically active antibacterial reagent, 2–amino-6-hydroxy–4–(4-N, N-dimethylaminophenyl-pyrimidine-5-carbonitrile (AHDMAPPC, was synthesized. It was employed to investigate the binding interaction with the bovine serum albumin (BSA in detail using different spectroscopic methods. It exhibited antibacterial activity against Escherichia coli and Staphylococcus aureus which are common food poisoning bacteria. The experimental results showed that the fluorescence quenching of model carrier protein BSA by AHDMAPPC was due to static quenching. The site binding constants and number of binding sites (n≈1 were determined at three different temperatures based on fluorescence quenching results. The thermodynamic parameters, enthalpy change (ΔH, free energy (ΔG and entropy change (ΔS for the reaction were calculated to be 15.15 kJ/mol, –36.11 kJ/mol and 51.26 J/mol K according to van't Hoff equation, respectively. The results indicated that the reaction was an endothermic and spontaneous process, and hydrophobic interactions played a major role in the binding between drug and BSA. The distance between donor and acceptor is 2.79 nm according to Förster's theory. The alterations of the BSA secondary structure in the presence of AHDMAPPC were confirmed by UV–visible, synchronous fluorescence, circular dichroism (CD and three-dimensional fluorescence spectra. All these results indicated that AHDMAPPC can bind to BSA and be effectively transported and eliminated in the body. It can be a useful guideline for further drug design.

  5. Compact Stokes shift and fluorescence spectroscopic diagnostics LED ratiometer unit with no moving parts for cancer detection

    Science.gov (United States)

    Sordillo, Laura A.; Pu, Yang; Budansky, Yury; Alfano, R. R.

    2012-01-01

    A compact Stokes shift and fluorescence spectroscopy (S3) LED device with no moving parts is presented. This device can be used diagnostically for the identification of the native biomolecules within cancerous tissue samples. This S3-LED ratiometer unit measures both the emission and absorption spectra of key native organic biomolecules within a tissue sample by using multiple wavelength LEDs (light emitting diodes) coupled to an optical fiber. Thus, an optical fingerprint of the sample can be obtained. This technique could be used to distinguish benign and malignant tissues, and to check for residual or recurrent carcinoma after treatment, thus reducing the necessity of second biopsies. The S3-LED ratiometer unit was tested in vitro on human breast malignant and normal paired tissue samples.

  6. Synthesis, spectroscopic characterisation, thermal analysis, DNA interaction and antibacterial activity of copper(I) complexes with N, N‧- disubstituted thiourea

    Science.gov (United States)

    Chetana, P. R.; Srinatha, B. S.; Somashekar, M. N.; Policegoudra, R. S.

    2016-02-01

    copper(I) complexes [Cu(4MTU)2Cl] (2), [Cu(4MTU) (B)Cl] (3), [Cu(6MTU)2Cl] (5) and [Cu(6MTU) (B)Cl] (6) where 4MTU = 1-Benzyl-3-(4-methyl-pyridin-2-yl)-thiourea (1) and 6MTU = 1-Benzyl-3-(6-methyl-pyridin-2-yl)-thiourea (4), B is a N,N-donor heterocyclic base, viz. 1,10-phenanthroline (phen 3, 6), were synthesized, characterized by various physico-chemical and spectroscopic techniques. The elemental analysis suggests that the stoichiometry to be 1:2 (metal:ligand) for 2, 5 1:1:1 (metal:ligand:B) for 3, 6. X-ray powder diffraction illustrates that the complexes have crystalline nature. IR data coupled with electronic spectra and molar conductance values suggest that the complex 2, 5 show the presence of a trigonal planar geometry and the complex 3, 6 show the presence of a tetrahedral geometry about the Cu(I) centre. The binding affinity towards calf thymus (CT) DNA was determined using UV-Vis, fluorescence spectroscopic titrations and viscosity studies. These studies showed that the tested phen complexes 3, 6 bind moderately (in the order of 105 M-1) to CT DNA. The complex 2, 5 does not show any apparent binding to the DNA and hence poor cleavage efficiency. Complex 3, 6 shows efficient oxidative cleavage of plasmid DNA in the presence of H2O2 involving hydroxyl radical species as evidenced from the control data showing inhibition of DNA cleavage in the presence of DMSO and KI. The in vitro antibacterial assay indicates that these complexes are good antimicrobial agents against various pathogens. Anti-bacterial activity is higher when thiourea coordinates to metal ion than the thiourea alone.

  7. Local examination of skin diffusion using FTIR spectroscopic imaging and multivariate target factor analysis.

    Science.gov (United States)

    Tetteh, J; Mader, K T; Andanson, J-M; McAuley, W J; Lane, M E; Hadgraft, J; Kazarian, S G; Mitchell, J C

    2009-05-29

    In the context of trans-dermal drug delivery it is very important to have mechanistic insight into the barrier function of the skin's stratum corneum and the diffusion mechanisms of topically applied drugs. Currently spectroscopic imaging techniques are evolving which enable a spatial examination of various types of samples in a dynamic way. ATR-FTIR imaging opens up the possibility to monitor spatial diffusion profiles across the stratum corneum of a skin sample. Multivariate data analyses methods based on factor analysis are able to provide insight into the large amount of spectroscopically complex and highly overlapping signals generated. Multivariate target factor analysis was used for spectral resolution and local diffusion profiles with time through stratum corneum. A model drug, 4-cyanophenol in polyethylene glycol 600 and water was studied. Results indicate that the average diffusion profiles between spatially different locations show similar profiles despite the heterogeneous nature of the biological sample and the challenging experimental set-up.

  8. Hydrate formation during wet granulation studied by spectroscopic methods and multivariate analysis

    DEFF Research Database (Denmark)

    Jørgensen, Anna; Rantanen, Jukka; Karjalainen, Milja

    2002-01-01

    PURPOSE: The aim was to follow hydrate formation of two structurally related drugs, theophylline and caffeine, during wet granulation using fast and nondestructive spectroscopic methods. METHODS: Anhydrous theophylline and caffeine were granulated with purified water. Charge-coupled device (CCD......) Raman spectroscopy was compared with near-infrared spectroscopy (NIR) in following hydrate formation of drugs during wet granulation (off-line). To perform an at-line process analysis, the effect of water addition was monitored by NIR spectroscopy and principal components analysis (PCA). The changes...... in the crystal arrangements were verified by using X-ray powder diffraction (XRPD). RESULTS: Hydrate formation of theophylline and caffeine could be followed by CCD Raman spectroscopy. The NIR and Raman spectroscopic results were consistent with each other. NIR revealed the state of water, and Raman spectroscopy...

  9. Spectroscopic analysis of carbonization behavior of wood, cellulose and lignin

    NARCIS (Netherlands)

    Ishimaru, Kengo; Hata, Toshimitsu; Bronsveld, Paul; Meier, Dietrich; Imamura, Yuji

    The surface and bulk chemistry of Japanese cedar (Cryptomeria Japonica), cotton cellulose and lignin samples carbonized at 500-1,000 degrees C was investigated by elemental analysis, Fourier-transform infrared spectroscopy (FTIR), X-ray photoelectron spectroscopy (XPS) and micro-Raman spectrometry.

  10. Quantitative comparison of analysis methods for spectroscopic optical coherence tomography

    NARCIS (Netherlands)

    Bosschaart, Nienke; van Leeuwen, Ton; Aalders, Maurice C.G.; Faber, Dirk

    2013-01-01

    pectroscopic optical coherence tomography (sOCT) enables the mapping of chromophore concentrations and image contrast enhancement in tissue. Acquisition of depth resolved spectra by sOCT requires analysis methods with optimal spectral/spatial resolution and spectral recovery. In this article, we

  11. Fluorescence and Fourier-transform infrared spectroscopy for the analysis of iconic Italian design lamps made of polymeric materials.

    Science.gov (United States)

    Toja, Francesca; Nevin, Austin; Comelli, Daniela; Levi, Marinella; Cubeddu, Rinaldo; Toniolo, Lucia

    2011-03-01

    The preservation of design object collections requires an understanding of their constituent materials which are often polymeric blends. Challenges associated with aging of complex polymers from objects with an unknown physical history may compromise the interpretation of data from analytical techniques, and therefore complicate the assessment of the condition of polymers in indoor museum environments. This study focuses on the analysis of polymeric materials from three well-known Italian design lamps from the 1960s. To assess the degree of chemical modifications in the polymers, non-destructive molecular spectroscopic techniques, Fourier-transform infrared (FTIR) and fluorescence spectroscopy, have been applied directly on the object surfaces using an optical fiber probe and through examination of micro samples. FTIR spectra of the different polymers, polyvinylacetate (PVAc) for the lamps Taraxacum and Fantasma, and both acrylonitrile-butadiene-styrene polymer (ABS) and cellulose acetate (CA) for the lamp Nesso, allowed the detection of ongoing deterioration processes. Fluorescence spectroscopy proved particularly sensitive for the detection of molecular changes in the polymeric objects, as the spectra obtained from the examined lamps differ significantly from those of the unaged reference materials. Differences in fluorescence spectra are also detected between different points on the same object further indicating the presence of different chemical species on the surfaces. With the aid of complementary data from FTIR spectroscopy, an interpretation of the emission spectra of the studied polymeric objects is here proposed, further suggesting that fluorescence spectroscopy may be useful for following the degradation of historical polymeric objects.

  12. A study on the interaction of horse heart cytochrome c with some conventional and ionic liquid surfactants probed by ultraviolet-visible and fluorescence spectroscopic techniques.

    Science.gov (United States)

    Mondal, Satyajit; Das, Bijan

    2018-06-05

    The interactions of a protein cytochrome c with some selected conventional and ionic liquid surfactants have been investigated at pH7.4 using ultraviolet-visible and fluorescence spectroscopic techniques. We used four conventional surfactants - cetyltrimethylammonium bromide (CTAB), dodecyltrimethylammonium bromide (DTAB), sodium N-dodecanoylsarcosinate (SDDS), and N-decanoyl-N-methylglucamine (Mega 10), and a surface active ionic liquid 1-hexadecyl-3-methylimidazolium chloride (C 16 MeImCl). All the investigated surfactants were found to induce an unfolding of the protein cytochrome c. In presence of CTAB, SDDS and C 16 MeImCl, the heme iron atom was found to loose methionine from its axial position. Differential binding of the surfactant monomers and their micelles to the protein molecules was inferred. The ionic surfactants were found to be more effective than the nonionic one in unfolding the investigated protein. However, the extent of binding of CTAB/C 16 MeImCl to cytochrome c reaches a plateau past the critical micellization concentration (cmc) of the surfactant. For each of the cytochrome c-DTAB, cytochrome c-SDDS and cytochrome c-Mega 10 system, although there exists an inflection in the surfactant-binding, saturation point could not be detected. It has been demonstrated from the ultraviolet-visible spectral studies that the oxidation state of iron in cytochrome c does not change when the protein binds with the investigated surfactants. Copyright © 2018 Elsevier B.V. All rights reserved.

  13. Contribution of surface analysis spectroscopic methods to the lubrication field

    International Nuclear Information System (INIS)

    Blanc, C.

    1979-01-01

    The analytical surface technics such as ESCA, AES and SIMS are tested to be applied to a particular lubrication field. One deals with a 100 C 6 steel surface innumered in tricresylphosphate at 110 0 C for 15 days. The nature of the first layers is studied after relevant solvant cleaning. An iron oxide layer is produced on the bearing surface, namely αFe 2 -O 3 . ESCA, AES and SIMS studies show an overlayer of iron phosphate. The exact nature of iron phosphate is not clearly established but the formation of a ferrous phosphate coating can be assumed from ESCA analysis [fr

  14. Breath Analysis Using Laser Spectroscopic Techniques: Breath Biomarkers, Spectral Fingerprints, and Detection Limits

    Directory of Open Access Journals (Sweden)

    Peeyush Sahay

    2009-10-01

    Full Text Available Breath analysis, a promising new field of medicine and medical instrumentation, potentially offers noninvasive, real-time, and point-of-care (POC disease diagnostics and metabolic status monitoring. Numerous breath biomarkers have been detected and quantified so far by using the GC-MS technique. Recent advances in laser spectroscopic techniques and laser sources have driven breath analysis to new heights, moving from laboratory research to commercial reality. Laser spectroscopic detection techniques not only have high-sensitivity and high-selectivity, as equivalently offered by the MS-based techniques, but also have the advantageous features of near real-time response, low instrument costs, and POC function. Of the approximately 35 established breath biomarkers, such as acetone, ammonia, carbon dioxide, ethane, methane, and nitric oxide, 14 species in exhaled human breath have been analyzed by high-sensitivity laser spectroscopic techniques, namely, tunable diode laser absorption spectroscopy (TDLAS, cavity ringdown spectroscopy (CRDS, integrated cavity output spectroscopy (ICOS, cavity enhanced absorption spectroscopy (CEAS, cavity leak-out spectroscopy (CALOS, photoacoustic spectroscopy (PAS, quartz-enhanced photoacoustic spectroscopy (QEPAS, and optical frequency comb cavity-enhanced absorption spectroscopy (OFC-CEAS. Spectral fingerprints of the measured biomarkers span from the UV to the mid-IR spectral regions and the detection limits achieved by the laser techniques range from parts per million to parts per billion levels. Sensors using the laser spectroscopic techniques for a few breath biomarkers, e.g., carbon dioxide, nitric oxide, etc. are commercially available. This review presents an update on the latest developments in laser-based breath analysis.

  15. Fluorescent microscopy approaches of quantitative soil microbial analysis

    Science.gov (United States)

    Ivanov, Konstantin; Polyanskaya, Lubov

    2015-04-01

    hybridization method (FISH). This approach was used for evaluation of contribution of each gram-negative bactera group. No significant difference between the main soil gram-negative bacterial groups (phylum Proteobacteria and Bacteroidetes) was found both under anaerobic and anaerobic conditions in chernozem in the topsoil. Thus soil gram-negative bacteria play an important ecological role in natural polymer degradation as common group of microorganisms. Another approach with using cascade filtration technique for bacterial population density estimation in chernozem was compared to classical method of fluorescent microscopy. Quantification of soil bacteria with cascade filtration provided by filters with different diameters and filtering of soil suspension in fixed amount. In comparison to the classical fluorescent microscopy method the modification with filtration of soil suspension provided to quantify more bacterial cells. Thus biomass calculation results of soil bacteria by using classical fluorescent microscopy could be underestimated and combination with cascade filtration technique allow to avoid potential experimental error. Thereby, combination and comparison of several fluorescent microscopy methods modifications established during the research provided miscellaneous approaches in soil bacteria quantification and analysis of ecological roles of soil microorganisms.

  16. ANNA: A Convolutional Neural Network Code for Spectroscopic Analysis

    Science.gov (United States)

    Lee-Brown, Donald; Anthony-Twarog, Barbara J.; Twarog, Bruce A.

    2018-01-01

    We present ANNA, a Python-based convolutional neural network code for the automated analysis of stellar spectra. ANNA provides a flexible framework that allows atmospheric parameters such as temperature and metallicity to be determined with accuracies comparable to those of established but less efficient techniques. ANNA performs its parameterization extremely quickly; typically several thousand spectra can be analyzed in less than a second. Additionally, the code incorporates features which greatly speed up the training process necessary for the neural network to measure spectra accurately, resulting in a tool that can easily be run on a single desktop or laptop computer. Thus, ANNA is useful in an era when spectrographs increasingly have the capability to collect dozens to hundreds of spectra each night. This talk will cover the basic features included in ANNA and demonstrate its performance in two use cases: an open cluster abundance analysis involving several hundred spectra, and a metal-rich field star study. Applicability of the code to large survey datasets will also be discussed.

  17. Mechanical and Spectroscopic Analysis of Retrieved/Failed Dental Implants

    Directory of Open Access Journals (Sweden)

    Umer Daood

    2017-11-01

    Full Text Available The purpose of this study was to examine surface alterations and bone formation on the surface of failed dental implants (Straumann [ST] and TiUnite [TiUn] removed due to any biological reason. In addition, failure analysis was performed to test mechanical properties. Dental implants (n = 38 from two manufacturers were collected and subjected to chemical cleaning. The presence of newly formed hydroxyapatite bone around failed implants was evaluated using micro-Raman spectroscopy. Scanning electron microscopy was used to identify surface defects. Mechanical testing was performed using a Minneapolis servo-hydraulic system (MTS along with indentation using a universal testing machine and average values were recorded. A statistical analysis of mechanical properties was done using an unpaired t test, and correlation between observed defects was evaluated using Chi-square (p = 0.05. Apatite-formation was evident in both implants, but was found qualitatively more in the ST group. No significant difference was found in indentation between the two groups (p > 0.05. The percentage of “no defects” was significantly lower in the ST group (71%. Crack-like and full-crack defects were observed in 49% and 39% of TiUn. The ST group showed 11,061 cycles to failure as compared with 10,021 cycles in the TiUnite group. Implant failure mechanisms are complex with a combination of mechanical and biological reasons and these factors are variable with different implant systems.

  18. Fractal and spectroscopic analysis of soot from internal combustion engines

    Science.gov (United States)

    Swapna, M. S.; Saritha Devi, H. V.; Raj, Vimal; Sankararaman, S.

    2018-03-01

    Today diesel engines are used worldwide for various applications and very importantly in transportation. Hydrocarbons are the most widespread precursors among carbon sources employed in the production of carbon nanotubes (CNTs). The aging of internal combustion engine is an important parameter in deciding the carbon emission and particulate matter due to incomplete combustion of fuel. In the present work, an attempt has been made for the effective utilization of the aged engines for potential applicationapplications in fuel cells and nanoelectronics. To analyze the impact of aging, the particulate matter rich in carbon content areis collected from diesel engines of different ages. The soot with CNTs is purified by the liquid phase oxidation method and analyzed by Field Emission Scanning Electron Microscopy, High-Resolution Transmission Electron Microscopy, Energy Dispersive Spectroscopy, UV-Visible spectroscopy, Raman spectroscopy and Thermogravimetric analysis. The SEM image contains self-similar patterns probing fractal analysis. The fractal dimensions of the samples are determined by the box counting method. We could find a greater amount of single-walled carbon nanotubes (SWCNTs) in the particulate matter emitted by aged diesel engines and thereby giving information about the combustion efficiency of the engine. The SWCNT rich sample finds a wide range of applicationapplications in nanoelectronics and thereby pointing a potential use of these aged engines.

  19. Fluorescence analysis of cadmium by solvent extraction of thiooxine chelate

    International Nuclear Information System (INIS)

    Kawagaki, Kyozo; Watanabe, Kunihiro; Yoshida, Toshiaki

    1976-01-01

    The fluorescence analysis of cadmium by the solvent extraction using O-phen anthroine (O-phen) concurrently was studied, aiming at extending the limit of analysis. The effects of pyridine on the analysis was also examined. Further, the composition of their complexes was studied. 3 ml of 5% ascorbic acid, 0.3 ml of 0.2% thiooxine solution and 3 ml of 0.1% O-phen solution or 3 ml of 50% pyridine solution were added to the sample solution containing not more than 20 microgram of cadmium. The volume was made up to 50 ml. The solution was shaken with 10 ml of chloroform at pH 4.5 for 2 minutes. The specific fluorescent intensity of the extracted organic phase was measured with reference to the uranine solution was the concentration of 0.2 microgram per ml, using the wave length of 365 nm and 515 nm. The experiment revealed that the limit of analysis can be extended by concurrently using O-phen, and that pyridine composed of ternary complexes can be used in the analysis similarly to O-phen. The comparison between pyridine and O-phen showed that benzene can be used besides chloroform. From the view-point of handling, O-phen is better than pyridine. (Iwakiri, K.)

  20. New spectroscopic techniques for wine analysis and characterization

    International Nuclear Information System (INIS)

    Edelmann, A.

    2003-01-01

    The objective of the presented thesis was the development of new, rapid tools for wine analysis based on Fourier transform infrared (FTIR) and Ultraviolet/Visible (UV/Vis) - spectroscopy. The results of this thesis are presented in the form of five publications. In publication I a sensor for assessing the main sensory property of red wine polyphenols (tannins), namely astringency, was developed on basis of the underlying chemical reaction between the tannins and the proline-rich proteins in the saliva. The interaction of polyphenols (tannins) with proline rich proteins (gelatin) has been studied using an automated flow injection system with FTIR detection. In Publication II FTIR-spectroscopy of polyphenolic wine extracts combined with multivariate data analysis was applied for the varietal discrimination of Austrian red wines. By hierarchical clustering it could be shown that the mid-infrared spectra of the dry extracts contain information on the varietal origin of wines. The classification of the wines was successfully performed by soft independent modeling of class analogies (SIMCA). Publication III describes the determination of carbohydrates, alcohols and organic acids in red wine by Ion-exchange high performance liquid chromatography hyphenated with FTIR-detection, where a diamond attenuated total reflectance (ATR)-element was employed for the design of a rugged detector. Partly or completely co-eluting peaks were chemometrically resolved by multivariate curve resolution - alternating least squares (MCR-ALS). Publication IV reports the first application of a mid-infrared quantum cascade laser (QCL) for molecular specific laser detection in liquid chromatography. Using a laser wavelength of 9.3721 μm glucose and fructose could be specifically detected and quantified in red wine in spite of the presence of organic acids. Publication V presents the development of an automated method for measuring the primary amino acid concentration in wines and musts by

  1. The lipid dependence of melittin action investigated by dual-color fluorescence burst analysis

    NARCIS (Netherlands)

    Bogaart, Geert van den; Mika, Jacek T.; Krasnikov, Viktor; Poolman, Bert

    Dual-color fluorescence-burst analysis was used to study melittin-induced leakage of macromolecules from liposomes of various lipid compositions. To perform dual-color fluorescence-burst analysis, fluorescently labeled size-marker molecules were encapsulated into liposomes, labeled with a second

  2. Conformational analysis and vibrational spectroscopic studies on dapsone

    Science.gov (United States)

    Ildiz, Gulce Ogruc; Akyuz, Sevim

    2012-11-01

    In this study, the theoretical conformation analysis of free dapsone has been performed by single point energy calculations at both semi-empirical PM3 and DFT/B3LYP-3-21G theory levels and three stable conformers were determined. Both the IR and Raman spectra of the molecule in solid phase have been recorded. The IR intensities and harmonic vibrational wavenumbers of each conformer were calculated by DFT method at B3LYP/6-31++G(d,p) theory level. For the fundamental characterization, the total energy distribution (TED) calculations of the vibrational modes were done using parallel quantum mechanic solution program (SQM) and the fundamental modes were assigned. The theoretical results are in agreement with the experimental ones.

  3. Spectroscopic Analysis of Perfluoropolyether Lubricant Degradation During Boundary Lubrication

    Science.gov (United States)

    Herrera-Fierro, Pilar; Shogrin, Bradley A.; Jones, William R., Jr.

    1996-01-01

    The degradation of a branched perfluoropolyether (PFPE) under boundary lubrication conditions was studied using mu-FTIR and mu-Raman spectroscopies. Stainless steel (440C) discs coated with thin (600A), uniform films of the PFPE were tested in a ball-on-disc apparatus until various levels of friction coefficient were attained. Discs were then examined using the above techniques. When the friction coefficient surpassed the value obtained with an un-lubricated control, the lubricant film had either been physically displaced or partially transformed in to a 'friction polymer'. Infrared analysis of this 'friction polymer' indicated the presence of a polymeric fluorinated acid species (R(sub f)COOH). Raman spectroscopy indicated the presence of amorphous carbon in the wear track and in the friction polymer. Some reaction mechanisms are suggested to explain the results.

  4. Fluorescent foci quantitation for high-throughput analysis

    Directory of Open Access Journals (Sweden)

    Elena Ledesma-Fernández

    2015-06-01

    Full Text Available A number of cellular proteins localize to discrete foci within cells, for example DNA repair proteins, microtubule organizing centers, P bodies or kinetochores. It is often possible to measure the fluorescence emission from tagged proteins within these foci as a surrogate for the concentration of that specific protein. We wished to develop tools that would allow quantitation of fluorescence foci intensities in high-throughput studies. As proof of principle we have examined the kinetochore, a large multi-subunit complex that is critical for the accurate segregation of chromosomes during cell division. Kinetochore perturbations lead to aneuploidy, which is a hallmark of cancer cells. Hence, understanding kinetochore homeostasis and regulation are important for a global understanding of cell division and genome integrity. The 16 budding yeast kinetochores colocalize within the nucleus to form a single focus. Here we have created a set of freely-available tools to allow high-throughput quantitation of kinetochore foci fluorescence. We use this ‘FociQuant’ tool to compare methods of kinetochore quantitation and we show proof of principle that FociQuant can be used to identify changes in kinetochore protein levels in a mutant that affects kinetochore function. This analysis can be applied to any protein that forms discrete foci in cells.

  5. Application of Spectroscopic Methods for Structural Analysis of Chitin and Chitosan

    Directory of Open Access Journals (Sweden)

    Jolanta Kumirska

    2010-04-01

    Full Text Available Chitin, the second most important natural polymer in the world, and its N-deacetylated derivative chitosan, have been identified as versatile biopolymers for a broad range of applications in medicine, agriculture and the food industry. Two of the main reasons for this are firstly the unique chemical, physicochemical and biological properties of chitin and chitosan, and secondly the unlimited supply of raw materials for their production. These polymers exhibit widely differing physicochemical properties depending on the chitin source and the conditions of chitosan production. The presence of reactive functional groups as well as the polysaccharide nature of these biopolymers enables them to undergo diverse chemical modifications. A complete chemical and physicochemical characterization of chitin, chitosan and their derivatives is not possible without using spectroscopic techniques. This review focuses on the application of spectroscopic methods for the structural analysis of these compounds.

  6. Hybrid pigments resulting from several guest dyes onto γ-alumina host: A spectroscopic analysis

    Science.gov (United States)

    Pérez, Erik; Ibarra, Ilich A.; Guzmán, Ariel; Lima, Enrique

    2017-02-01

    The synthesis of hybrid pigments was made from combination of γ-Al2O3 and some organic chromophores such as carminic acid, alizarin, purpurin, curcumin, fluorescein and betacyanins. The γ-Al2O3 was obtained through sol-gel synthesis with 2-propanol and aluminium tri-sec-butoxide (ATB). This article presents some spectroscopic evidences related to the formation of aluminium complexes between coordinative unsaturated sites (CUS) of aluminium and some organic groups (carboxylic acid, quaternary ammonium and β-keto enol) present in the chromophores structure. The physicochemical properties upcoming from a spectroscopic analysis point out that these materials can be applied in the design of new materials with potential uses in artworks and in the field of cultural heritage.

  7. Infrared spectroscopic imaging: Label-free biochemical analysis of stroma and tissue fibrosis.

    Science.gov (United States)

    Nazeer, Shaiju S; Sreedhar, Hari; Varma, Vishal K; Martinez-Marin, David; Massie, Christine; Walsh, Michael J

    2017-11-01

    Infrared spectroscopic tissue imaging is a potentially powerful adjunct tool to current histopathology techniques. By coupling the biochemical signature obtained through infrared spectroscopy to the spatial information offered by microscopy, this technique can selectively analyze the chemical composition of different features of unlabeled, unstained tissue sections. In the past, the tissue features that have received the most interest were parenchymal and epithelial cells, chiefly due to their involvement in dysplasia and progression to carcinoma; however, the field has recently turned its focus toward stroma and areas of fibrotic change. These components of tissue present an untapped source of biochemical information that can shed light on many diverse disease processes, and potentially hold useful predictive markers for these same pathologies. Here we review the recent applications of infrared spectroscopic imaging to stromal and fibrotic regions of diseased tissue, and explore the potential of this technique to advance current capabilities for tissue analysis. Copyright © 2017 Elsevier Ltd. All rights reserved.

  8. Aequorea green fluorescent protein analysis by flow cytometry.

    Science.gov (United States)

    Ropp, J D; Donahue, C J; Wolfgang-Kimball, D; Hooley, J J; Chin, J Y; Hoffman, R A; Cuthbertson, R A; Bauer, K D

    1995-12-01

    The isolation and expression of the cDNA for the green fluorescent protein (GFP) from the bioluminescent jellyfish Aequorea victoria has highlighted its potential use as a marker for gene expression in a variety of cell types (Chalfie et al.: Science 263: 802-805, 1994). The longer wavelength peak (470 nm) of GFP's bimodal absorption spectrum better matches standard fluorescein filter sets; however, it has a considerably lower amplitude than the major absorption peak at 395. In an effort to increase the sensitivity of GFP with routinely available instrumentation, Heim et al. (Nature 373:663-664, 1995) have generated a GFP mutant (serine-65 to threonine; S65T-GFP) which possesses a single absorption peak centered at 490 nm. We have constructed this mutant in order to determine whether it or wild-type GFP (wt-GFP) afforded greater sensitivity when excited near their respective absorption maxima. Using the conventionally available 488 nm and ultraviolet (UV) laser lines from the argon ion laser as well as the 407 nm line from a krypton ion laser with enhanced violet emission, we were able to closely match the absorption maxima of both the S65T and wild-type forms of Aequorea GFP and analyze differences in fluorescence intensity of transiently transfected 293 cells with flow cytometry. The highest fluorescence signal was observed with 488 nm excitation of S65T-GFP relative to all other laser line/GFP pairs. The wt-GFP fluorescence intensity, in contrast, was significantly higher at 407 nm relative to either 488 nm or UV. These results were consistent with parallel spectrofluorometric analysis of the emission spectrum for wt-GFP and S65T-GFP. The relative contribution of cellular autofluorescence at each wavelength was also investigated and shown to be significantly reduced at 407 nm relative to either UV or 488 nm.

  9. DFT computations and spectroscopic analysis of a pesticide: Chlorothalonil

    Science.gov (United States)

    Dhas, D. Arul; Joe, I. Hubert; Roy, S. D. D.; Freeda, T. H.

    2010-09-01

    NIR FT-Raman and IR spectra of the biologically active molecule, chlorothalonil have been recorded and analyzed. The molecular geometry and vibrational wavenumbers of the title compound in the ground state have been calculated by density functional theory (DFT) with 6-31G(d) basis set. In order to obtain the information about the influence of intramolecular interaction on the molecule, the calculated geometries of chlorothalonil molecule was compared with the experimental data. The results of the optimized molecular structure gave clear evidence for the intramolecular charge transfer (ICT). Time-dependent density functional theory (TD-DFT) calculation of the electronic spectra has been performed and compared with the experimental UV-visible spectrum. Mulliken's net charges have been calculated and compared with the atomic natural charges. The effects of chlorine and cyanide group substituent in benzene ring in the vibrational wavenumbers have been analyzed. NBO analysis is useful to understand the intramolecular hyperconjugative interaction between lone pair Cl and σ*(C-C) bond orbital.

  10. Detection and monitoring of neurotransmitters--a spectroscopic analysis.

    Science.gov (United States)

    Manciu, Felicia S; Lee, Kendall H; Durrer, William G; Bennet, Kevin E

    2013-01-01

    We demonstrate that confocal Raman mapping spectroscopy provides rapid, detailed, and accurate neurotransmitter analysis, enabling millisecond time resolution monitoring of biochemical dynamics. As a prototypical demonstration of the power of the method, we present real-time in vitro serotonin, adenosine, and dopamine detection, and dopamine diffusion in an inhomogeneous organic gel, which was used as a substitute for neurologic tissue.  Dopamine, adenosine, and serotonin were used to prepare neurotransmitter solutions in distilled water. The solutions were applied to the surfaces of glass slides, where they interdiffused. Raman mapping was achieved by detecting nonoverlapping spectral signatures characteristic of the neurotransmitters with an alpha 300 WITec confocal Raman system, using 532 nm neodymium-doped yttrium aluminum garnet laser excitation. Every local Raman spectrum was recorded in milliseconds and complete Raman mapping in a few seconds.  Without damage, dyeing, or preferential sample preparation, confocal Raman mapping provided positive detection of each neurotransmitter, allowing association of the high-resolution spectra with specific microscale image regions. Such information is particularly important for complex, heterogeneous samples, where changes in composition can influence neurotransmission processes. We also report an estimated dopamine diffusion coefficient two orders of magnitude smaller than that calculated by the flow-injection method.  Accurate nondestructive characterization for real-time detection of neurotransmitters in inhomogeneous environments without the requirement of sample labeling is a key issue in neuroscience. Our work demonstrates the capabilities of Raman spectroscopy in biological applications, possibly providing a new tool for elucidating the mechanism and kinetics of deep brain stimulation. © 2012 International Neuromodulation Society.

  11. Ultratrace analysis of transuranic actinides by laser-induced fluorescence

    Science.gov (United States)

    Miller, Steven M.

    1988-01-01

    Ultratrace quantities of transuranic actinides are detected indirectly by their effect on the fluorescent emissions of a preselected fluorescent species. Transuranic actinides in a sample are coprecipitated with a host lattice material containing at least one preselected fluorescent species. The actinide either quenches or enhances the laser-induced fluorescence of the preselected fluorescent species. The degree of enhancement or quenching is quantitatively related to the concentration of actinide in the sample.

  12. Handbook of practical X-ray fluorescence analysis

    International Nuclear Information System (INIS)

    Beckhoff, B.; Wedell, R.; Wolff, H.

    2006-01-01

    X-ray fluorescence analysis (XRF) is a reliable multi-elemental and nondestructive analytical method widely used in research and industrial applications. This practical handbook provides self-contained modules featuring XRF instrumentation, quantification methods, and most of the current applications. The broad spectrum of topics is due to the efforts of a large number of authors from a variety of different types of institutions such as universities, research institutes, and companies. The book gives a survey of the theoretical fundamentals, analytical instrumentation, software for data processing, various excitation regimes including gracing incidents and microfocus measurements, quantitative analysis, applications in routine and micro analysis, mineralogy, biology, medicine, criminal investigations, archeology, metallurgy, abrasion, microelectronics, environmental air and water analysis. It gives the basic knowledge on this technique, information on analytical equipment and guides the reader to the various applications. This practical handbook is intended as a resource for graduate students, research scientists, and industrial users. (orig.)

  13. Quantification procedures in micro X-ray fluorescence analysis

    International Nuclear Information System (INIS)

    Kanngiesser, Birgit

    2003-01-01

    For the quantification in micro X-ray fluorescence analysis standardfree quantification procedures have become especially important. An introduction to the basic concepts of these quantification procedures is given, followed by a short survey of the procedures which are available now and what kind of experimental situations and analytical problems are addressed. The last point is extended by the description of an own development for the fundamental parameter method, which renders the inclusion of nonparallel beam geometries possible. Finally, open problems for the quantification procedures are discussed

  14. Hydrate formation during wet granulation studied by spectroscopic methods and multivariate analysis

    DEFF Research Database (Denmark)

    Jørgensen, Anna; Rantanen, Jukka; Karjalainen, Milja

    2002-01-01

    PURPOSE: The aim was to follow hydrate formation of two structurally related drugs, theophylline and caffeine, during wet granulation using fast and nondestructive spectroscopic methods. METHODS: Anhydrous theophylline and caffeine were granulated with purified water. Charge-coupled device (CCD......) Raman spectroscopy was compared with near-infrared spectroscopy (NIR) in following hydrate formation of drugs during wet granulation (off-line). To perform an at-line process analysis, the effect of water addition was monitored by NIR spectroscopy and principal components analysis (PCA). The changes...

  15. A pattern recognition approach in X-ray fluorescence analysis

    Science.gov (United States)

    Yin, Lo I.; Trombka, Jacob I.; Seltzer, Stephen M.

    1989-05-01

    In many applications of X-ray fluorescence (XRF) analysis, quantitative information on the chemical components of the sample is not of primary concern. Instead, the XRF spectra are used to monitor changes in the composition among samples, or to select and classify samples with similar compositions. We propose in this paper that the use of pattern recognition technique in such applications may be more convenient than traditional quantitative analysis. The pattern recognition technique discussed here involves only one parameter, i.e., the normalized correlation coefficient and can be applied directly to raw data. Its computation is simple and fast, and can be easily carried out on a personal computer. The efficacy of this pattern recognition approach is illustrated with the analysis of experimental XRF spectra obtained from geological and alloy samples.

  16. X-ray Microprobe for Fluorescence and Diffraction Analysis

    International Nuclear Information System (INIS)

    Ice, G.E.

    2005-01-01

    X-ray diffraction (see unit 1.1) and x-ray excited fluorescence analysis are powerful techniques for the nondestructive measurement of crystal structure and chemical composition. X-ray fluorescence analysis is inherently nondestructive with orders of magnitude lower power deposited for the same detectable limit as with fluorescence excited by charged particle probes (Sparks, 1980). X-ray diffraction analysis is sensitive to crystal structure with orders-of-magnitude greater sensitivity to crystallographic strain than electron probes (Rebonato, et al. 1989). When a small-area x-ray microbeam is used as the probe, chemical composition (Z>14), crystal structure, crystalline texture, and crystalline strain distributions can be determined. These distributions can be studied both at the surface of the sample and deep within the sample (Fig. 1). Current state-of-the-art can achieve an ∼1 mm-D x-ray microprobe and an ∼0.1 mm-D x-ray microprobe has been demonstrated (Bilderback, et al., 1994). Despite their great chemical and crystallographic sensitivities, x-ray microprobe techniques have until recently been restricted by inefficient x-ray focusing optics and weak x-ray sources; x-ray microbeam analysis was largely superseded by electron techniques in the 50's. However, interest in x-ray microprobe techniques has now been revived (Howells, et al., 1983; Ice and Sparks, 1984; Chevallier, et al., 1997; Riekel 1992; Thompson, el al., 1992; and Making and Using... 1997) by the development of efficient x-ray focusing optics and ultra-high intensity synchrotron x-ray sources (Buras and Tazzari, 1984; Shenoy, et al., 1988). These advances have increased the achievable microbeam flux by more than 11 orders of magnitude (Fig. 2) (Ice, 1997); the flux in a tunable 1 mm-D beam on a 'so called' 3rd-generation synchrotron source such as the APS can exceed the flux in a fixed-energy mm2 beam on a conventional source. These advances make x-ray microfluorescence and x

  17. Exploratory multivariate spectroscopic study on human skin.

    Science.gov (United States)

    Lauridsen, Rikke Kragh; Everland, Hanne; Nielsen, Lene Feldskov; Engelsen, Søren Balling; Nørgaard, Lars

    2003-05-01

    Spectroscopy on human skin is a field that is being adopted increasingly because of its rapidity and high reproducibility. Infrared reflectance (IR), near-infrared reflectance (NIR), and fluorescence spectroscopy have previously been applied to human skin in vivo to compare healthy and sick skin, including skin cancer, atopy, and leprosy. Exploratory data analysis/chemometrics is a tool for evaluating multivariate data such as spectroscopic measurements. The objective of this study was to explore the spectral variance spanned by people with normal integument, and to demonstrate the advantages of multivariate analysis to skin research. IR, NIR and fluorescence spectroscopy have been carried out in vivo on 216 volunteers' forearms before and after four tape strippings. The subjects were asked to fill in a questionnaire regarding factors suspected to influence the measurement results. Principal Component Analysis (PCA) was used to investigate whether the population can be divided into groups on the basis of their skin chemistry. Unless otherwise stated, the results are from the measurements prior to stripping. In contrast to IR and fluorescence spectra, NIR spectra proved able to detect gender differences. By use of PCA, classifications on male and female subjects were observed from the IR and NIR measurements, and as an indication from the fluorescence measurements. The NIR and fluorescence measurements varied between elderly and young subjects. The largest variance in the fluorescence landscapes was seen between pigmented and non-pigmented skin. No connection was found between the spectroscopic measurements and smoking or drinking habits. Future spectroscopic skin investigations should be balanced as regards to gender and age, as these can possibly affect the measurement results. Chemometrics proved to be superior to traditional attempts of interpreting the spectra.

  18. A comparison of microscopic and spectroscopic identification methods for analysis of microplastics in environmental samples.

    Science.gov (United States)

    Song, Young Kyoung; Hong, Sang Hee; Jang, Mi; Han, Gi Myung; Rani, Manviri; Lee, Jongmyoung; Shim, Won Joon

    2015-04-15

    The analysis of microplastics in various environmental samples requires the identification of microplastics from natural materials. The identification technique lacks a standardized protocol. Herein, stereomicroscope and Fourier transform infrared spectroscope (FT-IR) identification methods for microplastics (microplastics were significantly (p0.05) different. Depending on the number of samples and the microplastic size range of interest, the appropriate identification method should be determined; selecting a suitable identification method for microplastics is crucial for evaluating microplastic pollution. Copyright © 2015 Elsevier Ltd. All rights reserved.

  19. Quantitative Brightness Analysis of Fluorescence Intensity Fluctuations in E. Coli.

    Directory of Open Access Journals (Sweden)

    Kwang-Ho Hur

    Full Text Available The brightness measured by fluorescence fluctuation spectroscopy specifies the average stoichiometry of a labeled protein in a sample. Here we extended brightness analysis, which has been mainly applied in eukaryotic cells, to prokaryotic cells with E. coli serving as a model system. The small size of the E. coli cell introduces unique challenges for applying brightness analysis that are addressed in this work. Photobleaching leads to a depletion of fluorophores and a reduction of the brightness of protein complexes. In addition, the E. coli cell and the point spread function of the instrument only partially overlap, which influences intensity fluctuations. To address these challenges we developed MSQ analysis, which is based on the mean Q-value of segmented photon count data, and combined it with the analysis of axial scans through the E. coli cell. The MSQ method recovers brightness, concentration, and diffusion time of soluble proteins in E. coli. We applied MSQ to measure the brightness of EGFP in E. coli and compared it to solution measurements. We further used MSQ analysis to determine the oligomeric state of nuclear transport factor 2 labeled with EGFP expressed in E. coli cells. The results obtained demonstrate the feasibility of quantifying the stoichiometry of proteins by brightness analysis in a prokaryotic cell.

  20. Fluorescence intensity decay shape analysis microscopy (FIDSAM) for quantitative and sensitive live-cell imaging

    Science.gov (United States)

    Peter, Sébastien; Elgass, Kirstin; Sackrow, Marcus; Caesar, Katharina; Born, Anne-Kathrin; Maniura, Katharina; Harter, Klaus; Meixner, Alfred J.; Schleifenbaum, Frank

    2010-02-01

    Fluorescence microscopy became an invaluable tool in cell biology in the past 20 years. However, the information that lies in these studies is often corrupted by a cellular fluorescence background known as autofluorescence. Since the unspecific background often overlaps with most commonly used labels in terms of fluorescence spectra and fluorescence lifetime, the use of spectral filters in the emission beampath or timegating in fluorescence lifetime imaging (FLIM) is often no appropriate means for distinction between signal and background. Despite the prevalence of fluorescence techniques only little progress has been reported in techniques that specifically suppress autofluorescence or that clearly discriminate autofluorescence from label fluorescence. Fluorescence intensity decay shape analysis microscopy (FIDSAM) is a novel technique which is based on the image acquisition protocol of FLIM. Whereas FLIM spatially resolved maps the average fluorescence lifetime distribution in a heterogeneous sample such as a cell, FIDSAM enhances the dynamic image contrast by determination of the autofluorescence contribution by comparing the fluorescence decay shape to a reference function. The technique therefore makes use of the key difference between label and autofluorescence, i.e. that for label fluorescence only one emitting species contributes to fluorescence intensity decay curves whereas many different species of minor intensity contribute to autofluorescence. That way, we were able to suppress autofluorescence contributions from chloroplasts in Arabidopsis stoma cells and from cell walls in Arabidopsis hypocotyl cells to background level. Furthermore, we could extend the method to more challenging labels such as the cyan fluorescent protein CFP in human fibroblasts.

  1. Whole-brain analysis of amyotrophic lateral sclerosis by using echo-planar spectroscopic imaging.

    Science.gov (United States)

    Verma, Gaurav; Woo, John H; Chawla, Sanjeev; Wang, Sumei; Sheriff, Sulaiman; Elman, Lauren B; McCluskey, Leo F; Grossman, Murray; Melhem, Elias R; Maudsley, Andrew A; Poptani, Harish

    2013-06-01

    To detect regional metabolic differences in amyotrophic lateral sclerosis (ALS) with whole-brain echo-planar spectroscopic imaging. Sixteen patients with ALS (nine men, seven women; mean age, 56.6 years), five persons suspected of having ALS (four men, one woman; mean age, 62.6 years), and 10 healthy control subjects (five men, five women; mean age, 56.1 years) underwent echo-planar spectroscopic imaging after providing informed consent. The study was approved by the institutional review board and complied with HIPAA. Data were analyzed with the Metabolic Imaging and Data Analysis System software, and processed metabolite maps were coregistered and normalized to a standard brain template. Metabolite maps of creatine (Cr), choline (Cho), and N-acetylaspartate (NAA) were segmented into 81 regions with Automated Anatomical Labeling software to measure metabolic changes throughout the brains of patients with ALS. Statistical analysis involved an unpaired, uncorrected, two-sided Student t test. The NAA/Cho ratio across six regions was significantly lower by a mean of 23% (P ≤ .01) in patients with ALS than in control subjects. These regions included the caudate, lingual gyrus, supramarginal gyrus, and right and left superior and right inferior occipital lobes. The NAA/Cr ratio was significantly lower (P ≤ .01) in eight regions in the patient group, by a mean of 16%. These included the caudate, cuneus, frontal inferior operculum, Heschl gyrus, precentral gyrus, rolandic operculum, and superior and inferior occipital lobes. The Cho/Cr ratio did not significantly differ in any region between patient and control groups. Whole-brain echo-planar spectroscopic imaging permits detection of regional metabolic abnormalities in ALS, including not only the motor cortex but also several other regions implicated in ALS pathophysiologic findings.

  2. Principal component and spatial correlation analysis of spectroscopic-imaging data in scanning probe microscopy

    International Nuclear Information System (INIS)

    Jesse, Stephen; Kalinin, Sergei V

    2009-01-01

    An approach for the analysis of multi-dimensional, spectroscopic-imaging data based on principal component analysis (PCA) is explored. PCA selects and ranks relevant response components based on variance within the data. It is shown that for examples with small relative variations between spectra, the first few PCA components closely coincide with results obtained using model fitting, and this is achieved at rates approximately four orders of magnitude faster. For cases with strong response variations, PCA allows an effective approach to rapidly process, de-noise, and compress data. The prospects for PCA combined with correlation function analysis of component maps as a universal tool for data analysis and representation in microscopy are discussed.

  3. Uranium concentrate analysis by X-ray fluorescence spectroscopy

    International Nuclear Information System (INIS)

    Diaz-Guerra, J.P.; Bayon, A.; Roca, R.

    1978-01-01

    The determination of As, Ca, Fe, Mo, P, S, Si. Th, V and U in uranium concentrates by X-ray fluorescence spectroscopy has been studied. As and U are determined in nitric solutions and for the rest of elements analysis is performed by a bead fusion technique using Li 2 B 4 O 7 and Li 2 CO 3 as fluxes. Although the uranium matrix minimizes the absorption and enhancement effects, because of the content variations of this element it is advisable to operate at a constant level of U 3 O 8 . Despite the high matrix absorption and the large dilution of the samples, sensitivity and speed are found to be satisfactory as the result of the use of a high sensitivity automatic spectrometer. The spectral interferences of Mo on S and P, and of Pb on As have been particularly considered. (author) [es

  4. Gaseous detectors for energy dispersive X-ray fluorescence analysis

    Science.gov (United States)

    Veloso, J. F. C. A.; Silva, A. L. M.

    2018-01-01

    The energy resolution capability of gaseous detectors is being used in the last years to perform studies on the detection of characteristic X-ray lines emitted by elements when excited by external radiation sources. One of the most successful techniques is the Energy Dispersive X-ray Fluorescence (EDXRF) analysis. Recent developments in the new generation of micropatterned gaseous detectors (MPGDs), triggered the possibility not only of recording the photon energy, but also of providing position information, extending their application to EDXRF imaging. The relevant features and strategies to be applied in gaseous detectors in order to better fit the requirements for EDXRF imaging will be reviewed and discussed, and some application examples will be presented.

  5. Analysis of diatomaceous earth by x-ray fluorescence techniques

    International Nuclear Information System (INIS)

    Parker, J.

    1985-01-01

    The use of diatomaceous earth in industry as filtering aids, mineral fillers, catalyst carriers, chromatographic supports, and paint additives is well documented. The diatomite matrix is well suited to x-ray analysis, but this application has not been cited in the literature. In our laboratory, x-ray fluorescence spectrometry has been used to support the analytical needs of diatomite product development. Lithium borate fusion and pressed powder techniques have been used to determine major, minor, and trace elements in diatomite and synthetic silicate samples. Conventional matrix correction models and fundamental parameters have been used to reduce x-ray measurements to accurate chemical analyses. Described are sample and standard preparation techniques, data reduction methods, applications, and results

  6. Near infrared spectroscopic (NIRS) analysis of grapes and red-wines

    International Nuclear Information System (INIS)

    Guggenbichler, W.

    2003-04-01

    In this work vine varieties of the genus Vitis as well as grape-must and fully developed wines were examined by Near Infrared Spectroscopy (NIRS). The spectra were obtained by methods of transflection and transmission measurements. It was shown, that spectra of different varieties of grapes and red-wines can be combined in clusters by means of NIR spectroscopy and subsequent principle components analysis (PCA). In addition to this, it was possible to identify blends of two different varieties of wines as such and to determine the ratio of mixture. In several varieties of grape-must these NIR spectroscopic measurements further allowed a quantitative determination of important parameters concerning the quality of grapes, such as: sugar, total acidity, tartaric acid, malic acid, and pH-value. The content of polyphenols in grapes was also analyzed by this method. The total parameter for polyphenols in grapes is a helpful indicator for the optimal harvest time and the quality of grapes. All quantitative calculations were made by the method of partial least square regression (PLS). As these spectroscopic measurements require minimal sample preparations and due to the fact that measurements can be accomplished and results obtained within a few seconds, this method turned out to be a promising option in order to classify wines and to quantify relevant ingredients in grapes. (author)

  7. Comparative spectroscopic analysis of urinary calculi inhibition by Larrea Tridentata infusion and NDGA chemical extract

    Science.gov (United States)

    Manciu, Felicia

    2012-10-01

    In the present comparative spectroscopic study we try to understand calcium oxalate kidney stone formation as well as its inhibition by using a traditional medicine approach with Larrea Tridentata (LT) herbal extracts and nordihydroguaiaretic acid (NDGA), which is a chemical extract of the LT bush. The samples were synthesized without and with LT or NDGA using a simplified single diffusion gel growth technique. While the use of infusion from LT decreases the sizes of calcium oxalate crystals and also changes their structure from monohydrate for pure crystals to dihydrate for crystals grown with different amounts of inhibitor, both Raman and infrared absorption spectroscopic techniques, which are the methods of analysis employed in this work, reveal that NDGA is not responsible for the change in the morphology of calcium oxalate crystals and does not contribute significantly to the inhibition process. The presence of NDGA slightly affects the structure of the crystals by modifying the strength of the C-C bonds as seen in the Raman data. Also, the current infrared absorption results demonstrate the presence of NDGA in the samples through a vibrational line that corresponds to the double bond between carbon atoms of the ester group of NDGA.

  8. Zinc acetylacetonate hydrate adducted with nitrogen donor ligands: Synthesis, spectroscopic characterization, and thermal analysis

    Science.gov (United States)

    Brahma, Sanjaya; Shivashankar, S. A.

    2015-12-01

    We report synthesis, spectroscopic characterization, and thermal analysis of zinc acetylacetonate complex adducted by nitrogen donor ligands, such as pyridine, bipyridine, and phenanthroline. The pyridine adducted complex crystallizes to monoclinic crystal structure, whereas other two adducted complexes have orthorhombic structure. Addition of nitrogen donor ligands enhances the thermal property of these complexes as that with parent metal-organic complex. Zinc acetylacetonate adducted with pyridine shows much higher volatility (106 °C), decomposition temperature (202 °C) as that with zinc acetylacetonate (136 °C, 220 °C), and other adducted complexes. All the adducted complexes are thermally stable, highly volatile and are considered to be suitable precursors for metal organic chemical vapor deposition. The formation of these complexes is confirmed by powder X-ray diffraction, Fourier transform infrared spectroscopy, mass spectroscopy, and elemental analysis. The complexes are widely used as starting precursor materials for the synthesis of ZnO nanostructures by microwave irradiation assisted coating process.

  9. Recent Developments in Solid-Phase Extraction for Near and Attenuated Total Reflection Infrared Spectroscopic Analysis

    Directory of Open Access Journals (Sweden)

    Christian W. Huck

    2016-05-01

    Full Text Available A review with more than 100 references on the principles and recent developments in the solid-phase extraction (SPE prior and for in situ near and attenuated total reflection (ATR infrared spectroscopic analysis is presented. New materials, chromatographic modalities, experimental setups and configurations are described. Their advantages for fast sample preparation for distinct classes of compounds containing different functional groups in order to enhance selectivity and sensitivity are discussed and compared. This is the first review highlighting both the fundamentals of SPE, near and ATR spectroscopy with a view to real sample applicability and routine analysis. Most of real sample analyses examples are found in environmental research, followed by food- and bioanalysis. In this contribution a comprehensive overview of the most potent SPE-NIR and SPE-ATR approaches is summarized and provided.

  10. Spectroscopic Analysis of a Theropod Dinosaur (Reptilia, Archosauria from the Ipubi Formation, Araripe Basin, Northeastern Brazil

    Directory of Open Access Journals (Sweden)

    João Hermínio da Silva

    2013-01-01

    Full Text Available The Araripe Sedimentary Basin is known by the excellence of its fossils, regarding the preservation, diversity, and quantity. Here, we present a spectroscopic analysis using several experimental techniques (X-ray energy dispersion spectroscopy, Fourier-transform infrared spectroscopy as well as X-ray diffraction and thermogravimetric analysis applied in small fragments of bones from the posterior members of a theropod dinosaur. The results agree regarding the different composition of the stone matrix and the fossilized bone, indicating a partial substitution of the material by elements present in the depositional environment. However, differently from what is believed to occur, there is evidence that pyritization is not the only mechanism of fossilization for a specimen of Ipubi formation, but calcification, additionally, plays an important role in the fossil production of this Formation.

  11. VLT spectroscopic analysis of HH 202. Implications on dust destruction and thermal inhomogeneities

    Science.gov (United States)

    Espíritu, J. N.; Peimbert, A.; Delgado-Inglada, G.; Ruiz, M. T.

    2017-04-01

    We present a long-slit spectroscopic analysis of Herbig-Haro 202 and the surrounding gas of the Orion Nebula using data from the Very Large Telescope. We determined the spatial variation of its physical conditions and chemical abundances; our results are consistent with those from previous studies albeit with improved uncertainties in some determinations. Special attention is paid to the iron (Fe) and oxygen (O) abundances, which show a peak at the brightest part of HH 202, allowing us to estimate that 57% of the dust is the destroyed; we also calculate the amount of depletion of oxygen in dust grains, which amounts to 0.126±0.024 dex. Finally we show that O abundances determined from collisionally excited lines and recombination lines are irreconcilable at the center of the shock unless thermal inhomogeneities are considered.

  12. Spectroscopic analysis of DA white dwarfs from the McCook and Sion catalog

    International Nuclear Information System (INIS)

    Gianninas, A; Bergeron, P; Ruiz, M T

    2009-01-01

    For some years now, we have been gathering optical spectra of DA white dwarfs in an effort to study and define the empirical ZZ Ceti instability strip. However, we have recently expanded this survey to include all the DA white dwarfs in the McCook and Sion catalog down to a limiting visual magnitude of V = 17.5. We present here a spectroscopic analysis of over 1000 DA white dwarfs from this ongoing survey. We have several specific areas of interest most notably the hot DAO white dwarfs, the ZZ Ceti instability strip, and the DA+dM binary systems. Furthermore, we present a comparison of the ensemble properties of our sample with those of other large surveys of DA white dwarfs, paying particular attention to the distribution of mass as a function of effective temperature.

  13. Trypsin inhibitor complexes with human and bovine serum albumins: TEM and spectroscopic analysis.

    Science.gov (United States)

    Hebia, C; Bekale, L; Chanphai, P; Agbebavi, J; Tajmir-Riahi, H A

    2014-01-05

    We report the binding of trypsin inhibitor (TI) with human serum albumin (HSA) and bovine serum albumin (BSA) at physiological conditions, using FTIR, CD, UV-Visible spectroscopic methods and transmission electron microscopy (TEM). Structural analysis showed that trypsin inhibitor binds HSA and BSA via hydrophilic and hydrophobic contacts with overall binding constants of KTI-HSA=1.4 (±0.5)×10(4)M(-1) and KTI-BSA=1.1 (±0.4)×10(6)M(-1). Trypsin inhibitor complexation induces minor reduction of the protein α-helix and a major increase in β-sheet structure. TEM images show that trypsin inhibitor complex formation leads to the protein aggregation and fibrillation. Copyright © 2013 Elsevier B.V. All rights reserved.

  14. FT-Raman spectroscopic analysis of pigments from an Augustinian friary.

    Science.gov (United States)

    Edwards, Howell G M; Newton, Emma M; O'Connor, Sonia; Evans, D

    2010-08-01

    The Raman spectroscopic analysis of several stone samples with applied red pigments obtained from an archaeological excavation of an Augustinian friary discovered during the construction of an extension to Hull Magistrates Court in 1994 has revealed a surprising diversity of composition. Cinnabar, red lead and haematite have all been identified alone or in admixture; the cinnabar is exceptional in that it has only been found heavily adulterated with red ochre and red lead, as the other two pigments are found alone. There are signatures of limewash putty, which has been applied to the stone substrate prior to the painting, which is characteristic of the Roman method of wall painting, and there are no traces of gypsum found in the specimens studied. This evidence indicates an early mediaeval method of stone decoration.

  15. Renal function measured by X-ray fluorescence analysis

    International Nuclear Information System (INIS)

    Boijsen, M.; Jacobsson, L.; Tylen, U.; Sahlgrenska Sjukhuset, Goeteborg

    1987-01-01

    In twenty-six patients injected with metrizoate during urography, plasma was analyzed for iodine concentration using X-ray fluorescence analysis, and total plasma clearance of contrast medium was calculated. Total plasma clearance of 51 Cr-EDTA was also determined, but not simultaneously, in order to find out if the urographic procedure would influence the kidneys to such an extent that the contrast medium clearance value would differ much from the 51 Cr-EDTA clearance value. The errors in the method were assessed and the total error of the contrast medium clearance determination was calculated. When comparing 51 Cr-EDTA and metrizoate clearance a correlation of 0.94 and a mean ratio of 1.046 (SD 0.138) was found. The assessable errors cannot fully explain the standard deviation, which might indicate a transient change in kidney function related to elements of the urographic procedure such as laxation with possible dehydration and/or the contrast medium dose. (orig.)

  16. Using Nuclear Resonance Fluorescence for Nondestructive Isotopic Analysis

    International Nuclear Information System (INIS)

    Ludewigt, Bernhard A.; Mozin, Vladimir; Haefner, Andrew; Quiter, Brian

    2010-01-01

    Nuclear resonance fluorescence (NRF) has been studied as one of the nondestructive analysis (NDA) techniques currently being investigated by a multi-laboratory collaboration for the determination of Pu mass in spent fuel. In NRF measurements specific isotopes are identified by their characteristic lines in recorded gamma spectra. The concentration of an isotope in a material can be determined from measured NRF signal intensities if NRF cross sections and assay geometries are known. The potential of NRF to quantify isotopic content and Pu mass in spent fuel has been studied. The addition of NRF data to MCNPX and an improved treatment of the elastic photon scattering at backward angles has enabled us to more accurately simulate NRF measurements on spent fuel assemblies. Using assembly models from the spent fuel assembly library generated at LANL, NRF measurements are simulated to find the best measurement configurations, and to determine measurement sensitivities and times, and photon source and gamma detector requirements. A first proof-of-principal measurement on a mock-up assembly with a bremsstrahlung photon source demonstrated isotopic sensitivity to approximately 1% limited by counting statistics. Data collection rates are likely a limiting factor of NRF-based measurements of fuel assemblies but new technological advances may lead to drastic improvements.

  17. X-ray fluorescence analysis of Fe - Ni - Mo systems

    International Nuclear Information System (INIS)

    Belyaev, E.E.; Ershov, A.V.; Mashin, A.I.; Mashin, N.I.; Rudnevskij, N.K.

    1998-01-01

    Procedures for the X-ray fluorescence determination of the composition and thickness of Fe - Ni - Mo thin films and the concentration of elements in thick films of the Fe - Ni - Mo alloy are developed [ru

  18. Preparation of specimens for analysis by: X-ray diffraction and X-ray fluorescence analysis

    International Nuclear Information System (INIS)

    Banos L, L.

    2004-01-01

    Specimen preparation is one of the most important requirements in the analysis of samples by X-ray Diffraction and X-ray Fluorescence. This statement is especially true for samples containing different types of materials. There are many forms of specimen suitable for X-ray analysis and the type of the sample as received will generally determine the method of pretreatment. It is convenient to refer to the material received for analysis as the sample, and that, which is actually analyzed as the specimen. The powder Diffraction method assumes that the particles in the specimen are ideally random orientation and that there are enough crystallites in the specimen to achieve a representative intensity distribution for these crystallites. X ray Fluorescence is essentially a comparative method of analysis, it is vital that all standards and unknowns be presented to the spectrometer in a reproducible and identical manner. (Author) 3 refs., 6 figs

  19. Broadband photon time of flight spectroscopy: advanced spectroscopic analysis for ensuring safety and performance of pharmaceutical tablets

    DEFF Research Database (Denmark)

    Kamran, Faisal; Nielsen, Otto Højager Attermann; Andersson-Engels, Stefan

    2013-01-01

    We report on extended spectroscopic analysis of pharmaceutical tablets performed with broadband photon time-of-flight absorption/scaring spectroscopy. Precise monitoring of absorption and scattering spectra enables cost-efficient monitoring of key safety and performance parameters of the drugs....

  20. Cell-based and in vivo spectral analysis of fluorescent proteins for multiphoton microscopy

    Science.gov (United States)

    Salomonnson, Emma; Mihalko, Laura Anne; Verkhusha, Vladislav V.; Luker, Kathryn E.; Luker, Gary D.

    2012-09-01

    Multiphoton microscopy of cells and subcellular structures labeled with fluorescent proteins is the state-of-the-art technology for longitudinal imaging studies in tissues and living animals. Successful analysis of separate cell populations or signaling events by intravital microscopy requires optimal pairing of multiphoton excitation wavelengths with spectrally distinct fluorescent proteins. While prior studies have analyzed two photon absorption properties of isolated fluorescent proteins, there is limited information about two photon excitation and fluorescence emission profiles of fluorescent proteins expressed in living cells and intact tissues. Multiphoton microscopy was used to analyze fluorescence outputs of multiple blue, green, and red fluorescent proteins in cultured cells and orthotopic tumor xenografts of human breast cancer cells. It is shown that commonly used orange and red fluorescent proteins are excited efficiently by 750 to 760 nm laser light in living cells, enabling dual color imaging studies with blue or cyan proteins without changing excitation wavelength. It is also shown that small incremental changes in excitation wavelength significantly affect emission intensities from fluorescent proteins, which can be used to optimize multi-color imaging using a single laser wavelength. These data will direct optimal selection of fluorescent proteins for multispectral two photon microscopy.

  1. Analysis of photoisomerizable dyes using laser absorption and fluorescence techniques

    International Nuclear Information System (INIS)

    Duchowicz, R.; Di Paolo, R.E.; Scaffardi, L.; Tocho, J.O.

    1992-01-01

    The attention of the present report has been directed mainly to the description of laser-based techniques developed in order to obtain kinetic and spectroscopic properties of polymethine cyanine dyes in solution. Special attention was dedicated to photoisomerizable molecules where the absorption spectra of both isomers are strongly overlapped. As an example, measurements of two different dyes of laser technological interest, DTCI and DODCI were performed. The developed methods provide a complete quantitative description of photophysical processes. (author). 14 refs, 6 figs

  2. Gas Chromatography-Mass Spectroscopic (GC-MS) Analysis of n ...

    African Journals Online (AJOL)

    tuber-regium (synonym Pleurotus tuber regium) using gas chromatography-mass spectroscopic (GC-. MS) techniques. Methods: The n-hexane extract of the sclerotia ... Soxhlet extraction and analysed using gas chromatography-mass spectroscopic (MS) techniques. ..... Phytochemical composition of Pleurotus tuber regium.

  3. Vespucci: A Free, Cross-Platform Tool for Spectroscopic Data Analysis and Imaging

    Directory of Open Access Journals (Sweden)

    Daniel P. Foose

    2016-01-01

    Full Text Available Vespucci is a software application developed for imaging and analysis of hyperspectral datasets. Vespucci offers several advantages over other software packages, including a simple user interface with a small learning curve, no cost, and less restrictive licensing. Vespucci expands several analysis techniques including univariate imaging, principal components analysis, partial-least-squares regression, and vertex components analysis with endmember extraction, and k-means clustering. Additionally, Vespucci can perform a number of useful data-processing operations, including filtering, normalization, baseline correction, and background subtraction. Datasets that consist of spatial or temporal data with a corresponding digital signal, including spectroscopic images, mass spectrometric images, and X-ray diffraction data can be processed in this software. A few use cases for Raman and surface-enhanced Raman spectroscopies are provided. Vespucci is written in C++ and makes use of the MLPACK [3], Armadillo [9], Qt, and QCustomPlot libraries. Vespucci is a graphically-driven package that is designed with ease-of-use in mind and is equally capable to other available tools. Vespucci’s capabilities are extended by interfaces to Octave and R to allow existing research code to be run from a common environment. Additionally, Vespucci’s C++ classes can be used to construct more specialized programs when an application programming interface (API is desired. The source code and a Windows binary distribution can be accessed at https://github.com/dpfoose/Vespucci.

  4. Romanian medieval earring analysis by X-ray fluorescence technique

    Energy Technology Data Exchange (ETDEWEB)

    Therese, Laurent; Guillot, Philippe, E-mail: philippe.guillot@univ-jfc.fr [Laboratoire Diagnostics des Plasmas, CUFR J.F.C, Albi (France); Muja, Cristina [Laboratoire Diagnostics des Plasmas, CUFR J.F.C, Albi (France); Faculty of Biology, University of Bucharest (Romania); Vasile Parvan Institute of Archaeology, Bucharest, (Romania)

    2011-07-01

    Full text: Several instrumental techniques of elemental analysis are now used for the characterization of archaeological materials. The combination between archaeological and analytical information can provide significant knowledge on the constituting material origin, heritage authentication and restoration, provenance, migration, social interaction and exchange. Surface mapping techniques such as X-Ray Fluorescence have become a powerful tool for obtaining qualitative and semi-quantitative information about the chemical composition of cultural heritage materials, including metallic archaeological objects. In this study, the material comes from the Middle Age cemetery of Feldioara (Romania). The excavation of the site located between the evangelical church and the parsonage led to the discovery of several funeral artifacts in 18 graves among a total of 127 excavated. Even if the inventory was quite poor, some of the objects helped in establishing the chronology. Six anonymous Hungarian denarii (silver coins) were attributed to Geza II (1141-1161) and Stefan III (1162-1172), placing the cemetery in the second half of the XII century. This period was also confirmed by three loop shaped earrings with the end in 'S' form (one small and two large earrings). The small earring was found during the excavation in grave number 86, while the two others were discovered together in grave number 113. The anthropological study shown that skeletons excavated from graves 86 and 113 belonged respectively to a child (1 individual, medium level preservation, 9 months +/- 3 months) and to an adult (1 individual). In this work, elemental mapping were obtained by X-ray fluorescence (XRF) technique from Jobin Yvon Horiba XGT-5000 instrument offering detailed elemental images with a spatial resolution of 100{mu}m. The analysis revealed that the earrings were composed of copper, zinc and tin as major elements. Minor elements were also determined. The comparison between the two

  5. Single aflatoxin contaminated corn kernel analysis with fluorescence hyperspectral image

    Science.gov (United States)

    Yao, Haibo; Hruska, Zuzana; Kincaid, Russell; Ononye, Ambrose; Brown, Robert L.; Cleveland, Thomas E.

    2010-04-01

    Aflatoxins are toxic secondary metabolites of the fungi Aspergillus flavus and Aspergillus parasiticus, among others. Aflatoxin contaminated corn is toxic to domestic animals when ingested in feed and is a known carcinogen associated with liver and lung cancer in humans. Consequently, aflatoxin levels in food and feed are regulated by the Food and Drug Administration (FDA) in the US, allowing 20 ppb (parts per billion) limits in food and 100 ppb in feed for interstate commerce. Currently, aflatoxin detection and quantification methods are based on analytical tests including thin-layer chromatography (TCL) and high performance liquid chromatography (HPLC). These analytical tests require the destruction of samples, and are costly and time consuming. Thus, the ability to detect aflatoxin in a rapid, nondestructive way is crucial to the grain industry, particularly to corn industry. Hyperspectral imaging technology offers a non-invasive approach toward screening for food safety inspection and quality control based on its spectral signature. The focus of this paper is to classify aflatoxin contaminated single corn kernels using fluorescence hyperspectral imagery. Field inoculated corn kernels were used in the study. Contaminated and control kernels under long wavelength ultraviolet excitation were imaged using a visible near-infrared (VNIR) hyperspectral camera. The imaged kernels were chemically analyzed to provide reference information for image analysis. This paper describes a procedure to process corn kernels located in different images for statistical training and classification. Two classification algorithms, Maximum Likelihood and Binary Encoding, were used to classify each corn kernel into "control" or "contaminated" through pixel classification. The Binary Encoding approach had a slightly better performance with accuracy equals to 87% or 88% when 20 ppb or 100 ppb was used as classification threshold, respectively.

  6. Background approximation in automatic qualitative X-ray-fluorescent analysis

    International Nuclear Information System (INIS)

    Jordanov, J.; Tsanov, T.; Stefanov, R.; Jordanov, N.; Paunov, M.

    1982-01-01

    An empirical method of finding the dependence of the background intensity (Isub(bg) on the wavelength is proposed, based on the approximation of the experimentally found values for the background in the course of an automatic qualitative X-ray fluorescent analysis with pre-set curve. It is assumed that the dependence I(lambda) will be well approximated by a curve of the type Isub(bg)=(lambda-lambda sub(o)sup(fsub(1)(lambda))exp[fsub(2)(lambda)] where fsub(1) (lambda) and f 2 (lambda) are linear functions with respect to the sought parameters. This assumption was checked out on a ''pure'' starch background, in which it is not known beforehand which points belong to the background. It was assumed that the dependence I(lambda) can be found from all minima in the spectrum. Three types of minima has been distinguished: 1. the lowest point between two well-solved X-ray lines; 2. a minimum obtained as a result of statistical fluctuations of the measured signal; 3. the lowest point between two overlapped lines. The minima strongly deviating from the background are removed from the obtained set. The sum-total of the remaining minima serves as a base for the approximation of the dependence I(lambda). The unknown parameters are determined by means of the LSM. The approximated curve obtained by this method is closer to the real background than the background determined by the method described by Kigaki Denki, as the effect of all recorded minima is taken into account. As an example the PbTe spectrum recorded with crystal LiF 220 is shown graphically. The curve well describes the background of the spectrum even in the regions in which there are no minima belonging to the background. (authors)

  7. Radionuclide X-ray fluorescence analysis of components of the environment

    International Nuclear Information System (INIS)

    Toelgyessy, J.; Havranek, E.; Dejmkova, E.

    1983-12-01

    The physical foundations and methodology are described of radionuclide X-ray fluorescence analysis. The sources are listed of air, water and soil pollution, and the transfer of impurities into biological materials is described. A detailed description is presented of the sampling of air, soil and biological materials and their preparation for analysis. Greatest attention is devoted to radionuclide X-ray fluorescence analysis of the components of the environment. (ES)

  8. Analysis of complex samples using a portable multi-wavelength light emitting diode (LED) fluorescence spectrometer

    Science.gov (United States)

    Spectroscopic analysis of chemically complex samples often requires an increase n the dimensionality of the measured response surface. This often involves the measurement of emitted light intensities as functions of both wavelengths of excitation and emission resulting in the generation of an excita...

  9. Multielement characterization of atmospheric pollutants by x-ray fluorescence analysis and instrumental neutron activation analysis

    International Nuclear Information System (INIS)

    Rancitelli, L.A.; Tanner, T.M.

    1976-01-01

    The simultaneous measurement of a wide spectrum of elements in aerosols collected on air filters and in rainwater can yield information on the origin, transport, and removal of atmospheric pollutants. In order to determine the elemental content of these aerosols, a pair of highly sensitive, precise and complementing instrumental techniques, x-ray fluorescence and neutron activation analysis, have been developed and employed. Data are presented on the results of combined x-ray fluorescence and activation analysis of aerosols collected in a number of urban areas of the USA and from the 80th median sampling network in March 1972. From a comparison of these ratios in granite and diabase with those of filters placed in urban areas, it is evident that Zn, Se, Sb, Hg, and Pb levels have been increased by as much as several orders of magnitude. Al, Co, La, Fe, Eu, Sm, Tb, Ta, Hf, and Th appear to exist at levels compatible with an earth's crust origin

  10. Strategies of fluorescence staining for trace total ribonucleic acid analysis by capillary electrophoresis with argon ion laser-induced fluorescence.

    Science.gov (United States)

    Chung, Yi-An; Chen, Yi-Hsin; Chang, Po-Ling

    2015-08-01

    In this work, five fluorescent dyes (SYTO-9, SYBR Green I, SYBR Green II, SYBR Safe, and SYBR Gold) were used as both on-column and precolumn stains for total RNA analysis by CE-LIF with Ar ion laser excitation. In the on-column RNA stain, the SYTO-9 provided the highest fluorescence intensity and the lowest detectable concentration, as low as 10 pg/μL, while the SYBR Green II and SYBR Gold were adsorbed on the poly(ethylene oxide) thus affected the separation efficiency. As a precolumn stain, SYBR Gold was the most sensitive among the five dyes due to the strong affinity between the dye and RNA molecules. As a result, a single-cell quantity of RNA (10-30 pg per cell) could be detected by CE-LIF with precolumn staining by SYBR Gold. Because of the great savings of fluorescent dye using precolumn stain (one button dye may use for one million stain), this method is the best strategy for RNA staining in terms of cost-effectiveness and sensitivity. © 2015 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

  11. Investigation of the interaction of naringin palmitate with bovine serum albumin: spectroscopic analysis and molecular docking.

    Directory of Open Access Journals (Sweden)

    Xia Zhang

    Full Text Available BACKGROUND: Bovine serum albumin (BSA contains high affinity binding sites for several endogenous and exogenous compounds and has been used to replace human serum albumin (HSA, as these two compounds share a similar structure. Naringin palmitate is a modified product of naringin that is produced by an acylation reaction with palmitic acid, which is considered to be an effective substance for enhancing naringin lipophilicity. In this study, the interaction of naringin palmitate with BSA was characterised by spectroscopic and molecular docking techniques. METHODOLOGY/PRINCIPAL FINDINGS: The goal of this study was to investigate the interactions between naringin palmitate and BSA under physiological conditions, and differences in naringin and naringin palmitate affinities for BSA were further compared and analysed. The formation of naringin palmitate-BSA was revealed by fluorescence quenching, and the Stern-Volmer quenching constant (KSV was found to decrease with increasing temperature, suggesting that a static quenching mechanism was involved. The changes in enthalpy (ΔH and entropy (ΔS for the interaction were detected at -4.11 ± 0.18 kJ·mol(-1 and -76.59 ± 0.32 J·mol(-1·K(-1, respectively, which indicated that the naringin palmitate-BSA interaction occurred mainly through van der Waals forces and hydrogen bond formation. The negative free energy change (ΔG values of naringin palmitate at different temperatures suggested a spontaneous interaction. Circular dichroism studies revealed that the α-helical content of BSA decreased after interacting with naringin palmitate. Displacement studies suggested that naringin palmitate was partially bound to site I (subdomain IIA of the BSA, which was also substantiated by the molecular docking studies. CONCLUSIONS/SIGNIFICANCE: In conclusion, naringin palmitate was transported by BSA and was easily removed afterwards. As a consequence, an extension of naringin applications for use in food, cosmetic

  12. Preparation and spectroscopic analysis of zinc oxide nanorod thin films of different thicknesses

    Directory of Open Access Journals (Sweden)

    Mia Nasrul Haque

    2017-10-01

    Full Text Available Zinc oxide thin films with different thicknesses were prepared on microscopic glass slides by sol-gel spin coating method, then hydrothermal process was applied to produce zinc oxide nanorod arrays. The nanorod thin films were characterized by various spectroscopic methods of analysis. From the images of field emission scanning electron microscope (FESEM, it was observed that for the film thickness up to 200 nm the formed nanorods with wurtzite hexagonal structure were uniformly distributed over the entire surface substrate. From X-ray diffraction analysis it was revealed that the thin films had good polycrystalline nature with highly preferred c-axis orientation along (0 0 2 plane. The optical characterization done by UV-Vis spectrometer showed that all the films had high transparency of 83 % to 96 % in the visible region and sharp cut off at ultraviolet region of electromagnetic spectrum. The band gap of the films decreased as their thickness increased. Energy dispersive X-ray spectroscopy (EDS showed the presence of zinc and oxygen elements in the films and Fourier transform infrared spectroscopy (FT-IR revealed the chemical composition of ZnO in the film.

  13. Optimal methodologies for terahertz time-domain spectroscopic analysis of traditional pigments in powder form

    Science.gov (United States)

    Ha, Taewoo; Lee, Howon; Sim, Kyung Ik; Kim, Jonghyeon; Jo, Young Chan; Kim, Jae Hoon; Baek, Na Yeon; Kang, Dai-ill; Lee, Han Hyoung

    2017-05-01

    We have established optimal methods for terahertz time-domain spectroscopic analysis of highly absorbing pigments in powder form based on our investigation of representative traditional Chinese pigments, such as azurite [blue-based color pigment], Chinese vermilion [red-based color pigment], and arsenic yellow [yellow-based color pigment]. To accurately extract the optical constants in the terahertz region of 0.1 - 3 THz, we carried out transmission measurements in such a way that intense absorption peaks did not completely suppress the transmission level. This required preparation of pellet samples with optimized thicknesses and material densities. In some cases, mixing the pigments with polyethylene powder was required to minimize absorption due to certain peak features. The resulting distortion-free terahertz spectra of the investigated set of pigment species exhibited well-defined unique spectral fingerprints. Our study will be useful to future efforts to establish non-destructive analysis methods of traditional pigments, to construct their spectral databases, and to apply these tools to restoration of cultural heritage materials.

  14. TRANES analysis of the fluorescence of nile red in organized ...

    Indian Academy of Sciences (India)

    Unknown

    TRANES; TRES; fluorescence; nile red; solvent relaxation; organized molecular assemblies; solvation ... A polarity- and viscosity-sensitive dye such as nile red is used to probe the environmental properties around the site of .... Both the species are simultaneously excited giving rise to two emissive species A* and B*. A and ...

  15. Time-resolved fluorescence analysis of the mobile flavin cofactor

    Indian Academy of Sciences (India)

    Conformational heterogeneity of the FAD cofactor in -hydroxybenzoate hydroxylase (PHBH) was investigated with time-resolved polarized flavin fluorescence. For binary enzyme/substrate (analogue) complexes of wild-type PHBH and Tyr222 mutants, crystallographic studies have revealed two distinct flavin conformations ...

  16. LASER FLUORESCENCE EEM PROBE FOR CONE PENETROMETER POLLUTION ANALYSIS

    Science.gov (United States)

    A fiber optic LIF (Laser induced fluorescence) EEM (Excitation emission matrix) instrument for CPT deployment has been successfully developed and field tested. The system employs a Nd: YAG laser and Raman shifter as a rugged field portable excitation source. This excitation sou...

  17. X-Ray Diffraction and Fluorescence Instrument for Mineralogical Analysis at the Lunar Surface, Phase I

    Data.gov (United States)

    National Aeronautics and Space Administration — We propose to develop a compact and lightweight X-Ray Diffraction (XRD) / X-Ray Fluorescence (XRF) instrument for analysis of mineralogical composition of regolith,...

  18. X-Ray Diffraction and Fluorescence Instrument for Mineralogical Analysis at the Lunar Surface, Phase II

    Data.gov (United States)

    National Aeronautics and Space Administration — We propose to develop LUNA, a compact and lightweight X-Ray Diffraction (XRD) / X-Ray Fluorescence (XRF) instrument for mineralogical analysis of regolith, rock...

  19. Effects of non-enzymatic glycation in human serum albumin. Spectroscopic analysis

    Science.gov (United States)

    Szkudlarek, A.; Sułkowska, A.; Maciążek-Jurczyk, M.; Chudzik, M.; Równicka-Zubik, J.

    2016-01-01

    Human serum albumin (HSA), transporting protein, is exposed during its life to numerous factors that cause its functions become impaired. One of the basic factors - glycation of HSA - occurs in diabetes and may affect HSA-drug binding. Accumulation of advanced glycation end-products (AGEs) leads to diseases e.g. diabetic and non-diabetic cardiovascular diseases, Alzheimer disease, renal disfunction and in normal aging. The aim of the present work was to estimate how non-enzymatic glycation of human serum albumin altered its tertiary structure using fluorescence technique. We compared glycated human serum albumin by glucose (gHSAGLC) with HSA glycated by fructose (gHSAFRC). We focused on presenting the differences between gHSAFRC and nonglycated (HSA) albumin used acrylamide (Ac), potassium iodide (KI) and 2-(p-toluidino)naphthalene-6-sulfonic acid (TNS). Changes of the microenvironment around the tryptophan residue (Trp-214) of non-glycated and glycated proteins was investigated by the red-edge excitation shift method. Effect of glycation on ligand binding was examined by the binding of phenylbutazone (PHB) and ketoprofen (KP), which a primary high affinity binding site in serum albumin is subdomain IIA and IIIA, respectively. At an excitation and an emission wavelength of λex 335 nm and λem 420 nm, respectively the increase of fluorescence intensity and the blue-shift of maximum fluorescence was observed. It indicates that the glycation products decreases the polarity microenvironment around the fluorophores. Analysis of red-edge excitation shift method showed that the red-shift for gHSAFRC is higher than for HSA. Non-enzymatic glycation also caused, that the Trp residue of gHSAFRC becomes less accessible for the negatively charged quencher (I-), KSV value is smaller for gHSAFRC than for HSA. TNS fluorescent measurement demonstrated the decrease of hydrophobicity in the glycated albumin. KSV constants for gHSA-PHB systems are higher than for the unmodified serum

  20. Effects of non-enzymatic glycation in human serum albumin. Spectroscopic analysis.

    Science.gov (United States)

    Szkudlarek, A; Sułkowska, A; Maciążek-Jurczyk, M; Chudzik, M; Równicka-Zubik, J

    2016-01-05

    Human serum albumin (HSA), transporting protein, is exposed during its life to numerous factors that cause its functions become impaired. One of the basic factors --glycation of HSA--occurs in diabetes and may affect HSA-drug binding. Accumulation of advanced glycation end-products (AGEs) leads to diseases e.g. diabetic and non-diabetic cardiovascular diseases, Alzheimer disease, renal disfunction and in normal aging. The aim of the present work was to estimate how non-enzymatic glycation of human serum albumin altered its tertiary structure using fluorescence technique. We compared glycated human serum albumin by glucose (gHSA(GLC)) with HSA glycated by fructose (gHSA(FRC)). We focused on presenting the differences between gHSA(FRC) and nonglycated (HSA) albumin used acrylamide (Ac), potassium iodide (KI) and 2-(p-toluidino)naphthalene-6-sulfonic acid (TNS). Changes of the microenvironment around the tryptophan residue (Trp-214) of non-glycated and glycated proteins was investigated by the red-edge excitation shift method. Effect of glycation on ligand binding was examined by the binding of phenylbutazone (PHB) and ketoprofen (KP), which a primary high affinity binding site in serum albumin is subdomain IIA and IIIA, respectively. At an excitation and an emission wavelength of λex 335nm and λem 420nm, respectively the increase of fluorescence intensity and the blue-shift of maximum fluorescence was observed. It indicates that the glycation products decreases the polarity microenvironment around the fluorophores. Analysis of red-edge excitation shift method showed that the red-shift for gHSA(FRC) is higher than for HSA. Non-enzymatic glycation also caused, that the Trp residue of gHSA(FRC) becomes less accessible for the negatively charged quencher (I(-)), KSV value is smaller for gHSA(FRC) than for HSA. TNS fluorescent measurement demonstrated the decrease of hydrophobicity in the glycated albumin. KSV constants for gHSA-PHB systems are higher than for the

  1. Sampling, storage and sample preparation procedures for X ray fluorescence analysis of environmental materials

    International Nuclear Information System (INIS)

    1997-06-01

    X ray fluorescence (XRF) method is one of the most commonly used nuclear analytical technique because of its multielement and non-destructive character, speed, economy and ease of operation. From the point of view of quality assurance practices, sampling and sample preparation procedures are the most crucial steps in all analytical techniques, (including X ray fluorescence) applied for the analysis of heterogeneous materials. This technical document covers recent modes of the X ray fluorescence method and recent developments in sample preparation techniques for the analysis of environmental materials. Refs, figs, tabs

  2. Evaluation of a laser-induced fluorescence system for uranium analysis

    Energy Technology Data Exchange (ETDEWEB)

    White, L.E.

    1980-05-01

    A laser-induced fluorescence method for total uranium analysis of industrial process waters, waste waters, and leachates has been evaluated as a possible alternative for the normal, sodium fluoride and lithium fluoride, flame-fusion fluorescence method currently employed. Since the lower reporting limit of the laser fluorometer is on the order of 0.05 ..mu..g/L, samples for normal analysis can usually be diluted from 100 to 1000 fold which virtually eliminates interferences from quenching substances. Also, since the uranium determination is done in aqueous solution, laser-induced fluorescence entirely eliminates the need for organic extraction and the subsequent fusion process.

  3. Spectroscopic sensors for in-line bioprocess monitoring in research and pharmaceutical industrial application.

    Science.gov (United States)

    Claßen, Jens; Aupert, Florian; Reardon, Kenneth F; Solle, Dörte; Scheper, Thomas

    2017-01-01

    The use of spectroscopic sensors for bioprocess monitoring is a powerful tool within the process analytical technology (PAT) initiative of the US Food and Drug Administration. Spectroscopic sensors enable the simultaneous real-time bioprocess monitoring of various critical process parameters including biological, chemical, and physical variables during the entire biotechnological production process. This potential can be realized through the combination of spectroscopic measurements (UV/Vis spectroscopy, IR spectroscopy, fluorescence spectroscopy, and Raman spectroscopy) with multivariate data analysis to obtain relevant process information out of an enormous amount of data. This review summarizes the newest results from science and industry after the establishment of the PAT initiative and gives a critical overview of the most common in-line spectroscopic techniques. Examples are provided of the wide range of possible applications in upstream processing and downstream processing of spectroscopic sensors for real-time monitoring to optimize productivity and ensure product quality in the pharmaceutical industry.

  4. Spectroscopic Dosimeter Project

    Data.gov (United States)

    National Aeronautics and Space Administration — Analysis of Phase I test data demonstrates that the Photogenics Spectroscopic Dosimeter will detect neutron energies from 0.8 up to 600 MeV. The detector...

  5. Pathological diagnosis of bladder cancer by image analysis of hypericin induced fluorescence cystoscopic images

    Science.gov (United States)

    Kah, James C. Y.; Olivo, Malini C.; Lau, Weber K. O.; Sheppard, Colin J. R.

    2005-08-01

    Photodynamic diagnosis of bladder carcinoma based on hypericin fluorescence cystoscopy has shown to have a higher degree of sensitivity for the detection of flat bladder carcinoma compared to white light cystoscopy. The potential of the photosensitizer hypericin-induced fluorescence in performing non-invasive optical biopsy to grade bladder cancer in vivo using fluorescence cystoscopic image analysis without surgical resection for tissue biopsy is investigated in this study. The correlation between tissue fluorescence and histopathology of diseased tissue was explored and a diagnostic algorithm based on fluorescence image analysis was developed to classify the bladder cancer without surgical resection for tissue biopsy. Preliminary results suggest a correlation between tissue fluorescence and bladder cancer grade. By combining both the red-to-blue and red-to-green intensity ratios into a 2D scatter plot yields an average sensitivity and specificity of around 70% and 85% respectively for pathological cancer grading of the three different grades of bladder cancer. Therefore, the diagnostic algorithm based on colorimetric intensity ratio analysis of hypericin fluorescence cystoscopic images developed in this preliminary study shows promising potential to optically diagnose and grade bladder cancer in vivo.

  6. Spectroscopic analysis of PMMA/PVC blends containing CoCl2

    Directory of Open Access Journals (Sweden)

    N.S. Alghunaim

    2015-01-01

    Full Text Available Composites of polymethyl methacrylate (PMMA and polyvinyl chloride (PVC polymer blend containing different concentrations (⩽10 wt. of cobalt chloride (CoCl2 were prepared by casting techniques. The changes of the structural, spectroscopic, optical and thermal parameters of the samples are studied using different tools. FT-IR spectroscopy confirmed the complexation between the blends and Co+2-ions. The decrease or increase of IR band intensity with some shifts of other bands suggests an interaction and compatibility between PMMA/PVC blends with CoCl2 take place. The Ultra violet and visible (UV/Vis spectra indicated that the presence of band gap energy depends on increasing of CoCl2 contents. The absorption intensity of the samples doped with CoCl2 becomes faint lower than the pure blend. The values of energy gap for direct and indirect transition decreases with the increase of CoCl2 due to the presence of charge transfer between PMMA/PVC and CoCl2. The thermogravimetric analysis (TGA curves for all the samples have the same behavior and more steps of decomposition were observed. The reduction of mass loss for samples containing CoCl2 compared to the pure blend was observed and it was attributed to crosslink formation between the blend and CoCl2.

  7. NMR spectroscopic and analytical ultracentrifuge analysis of membrane protein detergent complexes

    Directory of Open Access Journals (Sweden)

    Choe Senyon

    2007-11-01

    Full Text Available Abstract Background Structural studies of integral membrane proteins (IMPs are hampered by inherent difficulties in their heterologous expression and in the purification of solubilized protein-detergent complexes (PDCs. The choice and concentrations of detergents used in an IMP preparation play a critical role in protein homogeneity and are thus important for successful crystallization. Results Seeking an effective and standardized means applicable to genomic approaches for the characterization of PDCs, we chose 1D-NMR spectroscopic analysis to monitor the detergent content throughout their purification: protein extraction, detergent exchange, and sample concentration. We demonstrate that a single NMR measurement combined with a SDS-PAGE of a detergent extracted sample provides a useful gauge of the detergent's extraction potential for a given protein. Furthermore, careful monitoring of the detergent content during the process of IMP production allows for a high level of reproducibility. We also show that in many cases a simple sedimentation velocity measurement provides sufficient data to estimate both the oligomeric state and the detergent-to-protein ratio in PDCs, as well as to evaluate the homogeneity of the samples prior to crystallization screening. Conclusion The techniques presented here facilitate the screening and selection of the extraction detergent, as well as help to maintain reproducibility in the detergent exchange and PDC concentration procedures. Such reproducibility is particularly important for the optimization of initial crystallization conditions, for which multiple purifications are routinely required.

  8. Spectroscopic analysis of bladder cancer tissues using Fourier transform infrared spectroscopy

    Science.gov (United States)

    Al-Muslet, Nafie A.; Ali, Essam E.

    2012-03-01

    Bladder cancer is one of the most common cancers in Africa. It takes several days to reach a diagnosis using histological examinations of specimens obtained by endoscope, which increases the medical expense. Recently, spectroscopic analysis of bladder cancer tissues has received considerable attention as a diagnosis technique due to its sensitivity to biochemical variations in the samples. This study investigated the use of Fourier transform infrared (FTIR) spectroscopy to analyze a number of bladder cancer tissues. Twenty-two samples were collected from 11 patients diagnosed with bladder cancer from different hospitals without any pretreatment. From each patient two samples were collected, one normal and another cancerous. FTIR spectrometer was used to differentiate between normal and cancerous bladder tissues via changes in spectra of these samples. The investigations detected obvious changes in the bands of proteins (1650, 1550 cm-1), lipids (2925, 2850 cm-1), and nucleic acid (1080, 1236 cm-1). The results show that FTIR spectroscopy is promising as a rapid, accurate, nondestructive, and easy to use alternative method for identification and diagnosis of bladder cancer tissues.

  9. Automated Spectroscopic Analysis Using the Particle Swarm Optimization Algorithm: Implementing a Guided Search Algorithm to Autofit

    Science.gov (United States)

    Ervin, Katherine; Shipman, Steven

    2017-06-01

    While rotational spectra can be rapidly collected, their analysis (especially for complex systems) is seldom straightforward, leading to a bottleneck. The AUTOFIT program was designed to serve that need by quickly matching rotational constants to spectra with little user input and supervision. This program can potentially be improved by incorporating an optimization algorithm in the search for a solution. The Particle Swarm Optimization Algorithm (PSO) was chosen for implementation. PSO is part of a family of optimization algorithms called heuristic algorithms, which seek approximate best answers. This is ideal for rotational spectra, where an exact match will not be found without incorporating distortion constants, etc., which would otherwise greatly increase the size of the search space. PSO was tested for robustness against five standard fitness functions and then applied to a custom fitness function created for rotational spectra. This talk will explain the Particle Swarm Optimization algorithm and how it works, describe how Autofit was modified to use PSO, discuss the fitness function developed to work with spectroscopic data, and show our current results. Seifert, N.A., Finneran, I.A., Perez, C., Zaleski, D.P., Neill, J.L., Steber, A.L., Suenram, R.D., Lesarri, A., Shipman, S.T., Pate, B.H., J. Mol. Spec. 312, 13-21 (2015)

  10. Constraining reconnection region conditions using imaging and spectroscopic analysis of a coronal jet

    Science.gov (United States)

    Brannon, Sean; Kankelborg, Charles

    2017-08-01

    Coronal jets typically appear as thin, collimated structures in EUV and X-ray wavelengths, and are understood to be initiated by magnetic reconnection in the lower corona or upper chromosphere. Plasma that is heated and accelerated upward into coronal jets may therefore carry indirect information on conditions in the reconnection region and current sheet located at the jet base. On 2017 October 14, the Interface Region Imaging Spectrograph (IRIS) and Solar Dynamics Observatory Atmospheric Imaging Assembly (SDO/AIA) observed a series of jet eruptions originating from NOAA AR 12599. The jet structure has a length-to-width ratio that exceeds 50, and remains remarkably straight throughout its evolution. Several times during the observation bright blobs of plasma are seen to erupt upward, ascending and subsequently descending along the structure. These blobs are cotemporal with footpoint and arcade brightenings, which we believe indicates multiple episodes of reconnection at the structure base. Through imaging and spectroscopic analysis of jet and footpoint plasma we determine a number of properties, including the line-of-sight inclination, the temperature and density structure, and lift-off velocities and accelerations of jet eruptions. We use these properties to constrain the geometry of the jet structure and conditions in reconnection region.

  11. Current role and future perspectives of multivariate (chemometric) methods in NMR spectroscopic analysis of pharmaceutical products.

    Science.gov (United States)

    Monakhova, Yulia B; Holzgrabe, Ulrike; Diehl, Bernd W K

    2018-01-05

    Nuclear magnetic resonance (NMR) is a fast and accurate analytical method. Associated with chemometrics, it gradually becomes more important tool for the pharmaceutical industry. In this review studies dealing with the applications of multivariate analysis to NMR spectroscopic profiles were grouped and discussed according to the analytical problem solved. The following topics were covered: authenticity of medicines according to variety, seasonal and geographical differences of herbal plants; quantitative prediction of pharmacologically relevant parameters; production and batches approval; investigation of drug structure modifications; site-specific natural isotope fractionation (SNIF-NMR) fingerprinting for origin and manufacturer tracking and others. Special focus was put on the heparin authenticity by using 1D and 2D NMR measurements. Finally, further research directions have been outlined. Our review has shown that chemometrics plays an important role for the quality control and authenticity of pharmaceutical products and its role will definitely increase in the future. The discussed approaches are recommended to be implemented during development and production process of pharmaceuticals or in quality control laboratories. Copyright © 2017 Elsevier B.V. All rights reserved.

  12. Spectroscopic study

    International Nuclear Information System (INIS)

    Flores, M.; Rodriguez, R.; Arroyo, R.

    1999-01-01

    This work is focused about the spectroscopic properties of a polymer material which consists of Polyacrylic acid (Paa) doped at different concentrations of Europium ions (Eu 3+ ). They show that to stay chemically joined with the polymer by a study of Nuclear Magnetic Resonance (NMR) of 1 H, 13 C and Fourier Transform Infrared Spectroscopy (Ft-IR) they present changes in the intensity of signals, just as too when this material is irradiated at λ = 394 nm. In according with the results obtained experimentally in this type of materials it can say that is possible to unify chemically the polymer with this type of cations, as well as, varying the concentration of them, since that these are distributed homogeneously inside the matrix maintaining its optical properties. These materials can be obtained more quickly and easy in solid or liquid phase and they have the best conditions for to make a quantitative analysis. (Author)

  13. Fluorescent Probes for Analysis and Imaging of Monoamine Oxidase Activity

    Energy Technology Data Exchange (ETDEWEB)

    Kim, Dokyoung; Jun, Yong Woong; Ahn, Kyo Han [POSTECH, Pohang (Korea, Republic of)

    2014-05-15

    Monoamine oxidases catalyze the oxidative deamination of dietary amines and amine neurotransmitters, and assist in maintaining the homeostasis of the amine neurotransmitters in the brain. Dysfunctions of these enzymes can cause neurological and behavioral disorders including Parkinson's and Alzheimer's diseases. To understand their physiological roles, efficient assay methods for monoamine oxidases are essential. Reviewed in this Perspective are the recent progress in the development of fluorescent probes for monoamine oxidases and their applications to enzyme assays in cells and tissues. It is evident that still there is strong need for a fluorescent probe with desirable substrate selectivity and photophysical properties to challenge the much unsolved issues associated with the enzymes and the diseases.

  14. Analysis of binding properties and interaction of thiabendazole and its metabolite with human serum albumin via multiple spectroscopic methods.

    Science.gov (United States)

    Sun, Qiaomei; He, Jiawei; Yang, Hongqin; Li, Shanshan; Zhao, Ludan; Li, Hui

    2017-10-15

    Thiabendazole (TBZ), which is oxidized into 5-hydroxythiabendazole (5-OH-TBZ) in vivo, is a commonly used food preservative. Interactions of TBZ and 5-OH-TBZ with human serum albumin (HSA) were comprehensively studied via multiple spectroscopic methods and molecular docking. This study focussed on the mechanistic and structural information on binding of TBZ and 5-OH-TBZ to HSA to evaluate the impact of the food additive on HSA. 1 H NMR spectra of the two ligands showed the binding exists. ITC and fluorescence spectroscopy results revealed that TBZ was a stronger ligand, with a binding constant of 10 5 l/mol and formed a more stable complex with HSA than did 5-OH-TBZ via electrostatic interaction. Spectroscopic results (UV-vis, FT-IR, and CD) showed that TBZ and 5-OH-TBZ caused conformational changes in HSA, in which α-helix and β-turn transformed into β-sheet, causing HSA structure to loosen. Docking programs showed that both TBZ and 5-OH-TBZ bound to HSA via IB. Copyright © 2017 Elsevier Ltd. All rights reserved.

  15. On-chip cell analysis platform: Implementation of contact fluorescence microscopy in microfluidic chips

    Science.gov (United States)

    Takehara, Hiroaki; Kazutaka, Osawa; Haruta, Makito; Noda, Toshihiko; Sasagawa, Kiyotaka; Tokuda, Takashi; Ohta, Jun

    2017-09-01

    Although fluorescence microscopy is the gold standard tool for biomedical research and clinical applications, their use beyond well-established laboratory infrastructures remains limited. The present study investigated a novel on-chip cell analysis platform based on contact fluorescence microscopy and microfluidics. Combined use of a contact fluorescence imager based on complementary metal-oxide semiconductor technology and an ultra-thin glass bottom microfluidic chip enabled both to observe living cells with minimal image distortion and to ease controlling and handling of biological samples (e.g. cells and biological molecules) in the imaged area. A proof-of-concept experiment of on-chip detection of cellular response to endothelial growth factor demonstrated promising use for the recently developed on-chip cell analysis platform. Contact fluorescence microscopy has numerous desirable features including compatibility with plastic microfluidic chips and compatibility with the electrical control system, and thus will fulfill the requirements of a fully automated cell analysis system.

  16. In situ Analysis of Coral Recruits Using Fluorescence Imaging

    Directory of Open Access Journals (Sweden)

    Adi Zweifler

    2017-09-01

    Full Text Available Recruitment is a fundamental process that influences coral population dynamics as well as reef community structure. To date, coral recruitment success rates are poorly quantified because survey methods are labor-intensive and require manual interpretation. Thus, they are prone to human errors and have low repeatability—a gap we aim to bridge in this research. Since both corals and their symbiotic algae contain fluorescent pigments (chlorophyll and fluorescent proteins, we used the non-invasive Fluorescence Imaging System (FluorIS and developed a methodology to acquire daytime fluorescent photographs and identify coral recruits in them. We tested our method by monitoring 20 random quadrats at two sites in the Gulf of Aqaba, Israel. The quadrats were surveyed once a month for 8 months in order to track the settlement, mortality and survival rates of new coral recruits. We demonstrate daytime imaging using our method and identification of coral recruits as small as 1 mm in diameter, in a 20 × 20 cm quadrat. Our results show that this photographic method reduces surveyor errors and improves precision. The surveys revealed that on average, there are ~2 new coral recruit settlements (<2 cm for a quadrat (40 cm2 per month and that 83% of them survive the first month. Our study suggests a relative stability in the Gulf of Aqaba coral population during the survey period. The ability to survey recruits during the day using low-cost, easy-to-use photographic equipment has the potential to contribute significantly to the standardization of coral reef monitoring and management tools, at a time when the world's coral reefs are declining due to local and global stressors.

  17. In vivo X-ray fluorescence analysis for medical diagnosis

    International Nuclear Information System (INIS)

    Groenberg, T.

    1981-05-01

    A Monte Carlo code has been constructed and used to simulate the energy distribution of scattered photons abtained in various in vivo X-ray fluorescence measurements. The structure of this distribution has been investigated and discussed. Studies of the response function of the Ge-decector used have made it possible to convert the calculated scatter spectra to pulse-height distributions. These studies have shown to be valuabel tools in designing in vivo X-ray fluorescence measurements. In vivo X-ray fluorescence measurements have been used for quantitative non-invasive measurements of the concentration of iodine-containing contrast media in rabbits without the use of blood or urine sampling. The biological half-life of the contrast medium in the soft tissue part of the nose (measured in vivo) was similar to that in serum (measured in vitro) when determined in the period 2-4 hours after injection. This result indicate the possibility of being able to use the method for clinical evaluation of kidney function. The method has been used in patients referred for urography and who had teherefore been injected with routine amounts of iodinecontaining urographic contrast medium. After urography, the elimination rates of urographic contrast medium from both serum and finger tissue were determined and copared during a two-hour period which began two hours after injection of contrast medium. A strong degree of correlation was found between the elimination rates from serum and finger tissue and also between the total clearances calculated from the serum and finger measurements respectively. Thus, after radiographic examinations quantitative estimation of kidney function may be obtained as a fringe benefit by external X-ray fluorescence measurements of the elimination from tissue of the contrast medium used. (author)

  18. Elemental analysis using a handheld X-Ray fluorescence spectrometer

    Science.gov (United States)

    Groover, Krishangi D.; Izbicki, John

    2016-06-24

    The U.S. Geological Survey is collecting geologic samples from local stream channels, aquifer materials, and rock outcrops for studies of trace elements in the Mojave Desert, southern California. These samples are collected because geologic materials can release a variety of elements to the environment when exposed to water. The samples are to be analyzed with a handheld X-ray fluorescence (XRF) spectrometer to determine the concentrations of up to 27 elements, including chromium.

  19. X-ray fluorescence analysis of some roman silver coins

    International Nuclear Information System (INIS)

    Daraban, L.; Cosma, C.; Fiat, T.

    1995-01-01

    Twenty ancient silver coins have been analyzed by the X-ray fluorescence method. For eliminating the effects that disturb the absolute quantitative measurements, we calculated, for each coin, the ratio between the elements that constitute the coin and related them to the silver concentration. From these measurements correlations diagrams have been obtained in which coins are grouped together depending on the silver sources and the purification technologies. (author). 12 refs., 4 figs., 1 tab

  20. Morphological, molecular and FTIR spectroscopic analysis during the differentiation of kidney cells from pluripotent stem cells

    Directory of Open Access Journals (Sweden)

    Monica Maribel Mata-Miranda

    2017-05-01

    Full Text Available Abstract Background Kidney diseases are a global health problem. Currently, over 2 million people require dialysis or transplant which are associated with high morbidity and mortality; therefore, new researches focused on regenerative medicine have been developed, including the use of stem cells. Results In this research, we generate differentiated kidney cells (DKCs from mouse pluripotent stem cells (mPSCs analyzing their morphological, genetic, phenotypic, and spectroscopic characteristics along differentiation, highlighting that there are no reports of the use of Fourier transform infrared (FTIR spectroscopy to characterize the directed differentiation of mPSCs to DKCs. The genetic and protein experiments proved the obtention of DKCs that passed through the chronological stages of embryonic kidney development. Regarding vibrational spectroscopy analysis by FTIR, bands related with biomolecules were shown on mPSCs and DKCs spectra, observing distinct differences between cell lineages and maturation stages. The second derivative of DKCs spectra showed changes in the protein bands compared to mPSCs. Finally, the principal components analysis obtained from FTIR spectra allowed to characterize chemical and structurally mPSCs and their differentiation process to DKCs in a rapid and non-invasive way. Conclusion Our results indicated that we obtained DKCs from mPSCs, which passed through the chronological stages of embryonic kidney development. Moreover, FTIR spectroscopy resulted in a non-invasive, rapid and precise technic that together with principal component analysis allows to characterize chemical and structurally both kind of cells and also discriminate and determine different stages along the cell differentiation process.

  1. Technique of sample preparation for analysis of gasoline and lubricating oils by X-ray fluorescence analysis

    International Nuclear Information System (INIS)

    Avila P, P.

    1990-03-01

    The X-ray fluorescence laboratory of the National Institute of Nuclear Research when not having a technique for the analysis of oils it has intended, with this work, to develop a preparation technique for the analysis of the metals of Pb, Cr, Ni, V and Mo in gasolines and oils, by means of the spectrometry by X-ray fluorescence analysis. The obtained results, its will be of great utility for the one mentioned laboratory. (Author)

  2. Distinguishability of Biological Material Using Ultraviolet Multi-Spectral Fluorescence

    Energy Technology Data Exchange (ETDEWEB)

    Gray, P.C.; Heinen, R.J.; Rigdon, L.D.; Rosenthal, S.E.; Shokair, I.R.; Siragusa, G.R.; Tisone, G.C.; Wagner, J.S.

    1998-10-14

    Recent interest in the detection and analysis of biological samples by spectroscopic methods has led to questions concerning the degree of distinguishability and biological variability of the ultraviolet (W) fluorescent spectra from such complex samples. We show that the degree of distinguishability of such spectra is readily determined numerically.

  3. Analysis of the binding interaction in uric acid - Human hemoglobin system by spectroscopic techniques

    Science.gov (United States)

    Makarska-Bialokoz, Magdalena

    2017-05-01

    The binding interaction between human hemoglobin and uric acid has been studied for the first time, by UV-vis absorption and steady-state, synchronous and three-dimensional fluorescence techniques. Characteristic effects observed for human hemoglobin intrinsic fluorescence during interaction with uric acid at neutral pH point at the formation of stacking non-covalent and non-fluorescent complexes. All the calculated parameters, the binding, fluorescence quenching and bimolecular quenching rate constants, as well as Förster resonance energy transfer parameters confirm the existence of static quenching. The results of synchronous fluorescence measurements indicate that the fluorescence quenching of human hemoglobin originates both from Trp and Tyr residues and that the addition of uric acid could significantly hinder the physiological functions of human hemoglobin.

  4. Comparison between non-invasive methods used on paintings by Goya and his contemporaries: hyperspectral imaging vs. point-by-point spectroscopic analysis.

    Science.gov (United States)

    Daniel, Floréal; Mounier, Aurélie; Pérez-Arantegui, Josefina; Pardos, Carlos; Prieto-Taboada, Nagore; Fdez-Ortiz de Vallejuelo, Silvia; Castro, Kepa

    2017-06-01

    The development of non-invasive techniques for the characterization of pigments is crucial in order to preserve the integrity of the artwork. In this sense, the usefulness of hyperspectral imaging was demonstrated. It allows pigment characterization of the whole painting. However, it also sometimes requires the complementation of other point-by-point techniques. In the present article, the advantages of hyperspectral imaging over point-by-point spectroscopic analysis were evaluated. For that purpose, three paintings were analysed by hyperspectral imaging, handheld X-ray fluorescence and handheld Raman spectroscopy in order to determine the best non-invasive technique for pigment identifications. Thanks to this work, the main pigments used in Aragonese artworks, and especially in Goya's paintings, were identified and mapped by imaging reflection spectroscopy. All the analysed pigments corresponded to those used at the time of Goya. Regarding the techniques used, the information obtained by the hyperspectral imaging and point-by-point analysis has been, in general, different and complementary. Given this fact, selecting only one technique is not recommended, and the present work demonstrates the usefulness of the combination of all the techniques used as the best non-invasive methodology for the pigments' characterization. Moreover, the proposed methodology is a relatively quick procedure that allows a larger number of Goya's paintings in the museum to be surveyed, increasing the possibility of obtaining significant results and providing a chance for extensive comparisons, which are relevant from the point of view of art history issues.

  5. Molecular Detection of Bladder Cancer by Fluorescence Microsatellite Analysis and an Automated Genetic Analyzing System

    Directory of Open Access Journals (Sweden)

    Sarel Halachmi

    2007-01-01

    Full Text Available To investigate the ability of an automated fluorescent analyzing system to detect microsatellite alterations, in patients with bladder cancer. We investigated 11 with pathology proven bladder Transitional Cell Carcinoma (TCC for microsatellite alterations in blood, urine, and tumor biopsies. DNA was prepared by standard methods from blood, urine and resected tumor specimens, and was used for microsatellite analysis. After the primers were fluorescent labeled, amplification of the DNA was performed with PCR. The PCR products were placed into the automated genetic analyser (ABI Prism 310, Perkin Elmer, USA and were subjected to fluorescent scanning with argon ion laser beams. The fluorescent signal intensity measured by the genetic analyzer measured the product size in terms of base pairs. We found loss of heterozygocity (LOH or microsatellite alterations (a loss or gain of nucleotides, which alter the original normal locus size in all the patients by using fluorescent microsatellite analysis and an automated analyzing system. In each case the genetic changes found in urine samples were identical to those found in the resected tumor sample. The studies demonstrated the ability to detect bladder tumor non-invasively by fluorescent microsatellite analysis of urine samples. Our study supports the worldwide trend for the search of non-invasive methods to detect bladder cancer. We have overcome major obstacles that prevented the clinical use of an experimental system. With our new tested system microsatellite analysis can be done cheaper, faster, easier and with higher scientific accuracy.

  6. Ionic liquid-based zinc oxide nanofluid for vortex assisted liquid liquid microextraction of inorganic mercury in environmental waters prior to cold vapor atomic fluorescence spectroscopic detection.

    Science.gov (United States)

    Amde, Meseret; Liu, Jing-Fu; Tan, Zhi-Qiang; Bekana, Deribachew

    2016-01-01

    Zinc oxide nanofluid (ZnO-NF) based vortex assisted liquid liquid microextraction (ZnO-NF VA-LLME) was developed and employed in extraction of inorganic mercury (Hg(2+)) in environmental water samples, followed by cold vapor atomic fluorescence spectrometry (CV-AFS). Unlike other dispersive liquid liquid microextraction techniques, ZnO-NF VA-LLME is free of volatile organic solvents and dispersive solvent consumption. Analytical signals were obtained without back-extraction from the ZnO-NF phase prior to CV-AFS determination. Some essential parameters of the ZnO-NF VA-LLME and cold vapor generation such as composition and volume of the nanofluid, vortexing time, pH of the sample solution, amount of the chelating agent, ionic strength and matrix interferences have been studied. Under optimal conditions, efficient extraction of 1ng/mL of Hg(2+) in 10mL of sample solution was achieved using 50μL of ZnO-NF. The enrichment factor before dilution, detection limits and limits of quantification of the method were about 190, 0.019 and 0.064ng/mL, respectively. The intra and inter days relative standard deviations (n=8) were found to be 4.6% and 7.8%, respectively, at 1ng/mL spiking level. The accuracy of the current method was also evaluated by the analysis of certified reference materials, and the measured Hg(2+) concentration of GBW08603 (9.6ng/mL) and GBW(E)080392 (8.9ng/mL) agreed well with their certified value (10ng/mL). The method was applied to the analysis of Hg(2+) in effluent, influent, lake and river water samples, with recoveries in the range of 79.8-92.8% and 83.6-106.1% at 1ng/mL and 5ng/mL spiking levels, respectively. Overall, ZnO-NF VA-LLME is fast, simple, cost-effective and environmentally friendly and it can be employed for efficient enrichment of the analyte from various water samples. Copyright © 2015 Elsevier B.V. All rights reserved.

  7. Expression and analysis of the green fluorescent protein gene in the fission yeast Schizosaccharomyces pombe.

    Science.gov (United States)

    Atkins, D; Izant, J G

    1995-11-01

    This report demonstrates that the Aequorea victoria green fluorescence protein (gfp) gene product will fluoresce in the fission yeast Schizosaccharomyces pombe when expressed from an episomal expression vector. Fluorescence was readily detectable at both the colony and single cell level. Application of fluorescence-activated cell sorting (FACS) techniques showed that gfp-expressing cells could be detected when they were as rare as 1% of a total yeast population. Quantitative analysis of gfp-expressing cells constituting as little as 5% of a total population was possible. These observations establish the suitability of the gfp gene for use in S. pombe and, in combination with FACS, offers an experimental strategy for quantitative analysis of gene expression in yeast populations.

  8. Bloodstain age analysis: toward solid state fluorescent lifetime measurements

    Science.gov (United States)

    Guo, Kevin; Zhegalova, Natalia; Achilefu, Samuel; Berezin, Mikhail Y.

    2013-03-01

    One of the most pressing unsolved challenges in forensic science is the determination of time since deposition (TSD) of bloodstains at crime scenes. Despite a number of high profile cases over the past couple hundred years involving controversy over TSD methods, no reliable quantitative method has been established. We present here an approach that has yet to be explored by forensic scientist: measuring the fluorescence lifetime of solid-state blood. Such a method would allow for on-site measurements of bloodstains utilizing the appropriate device, and would allow for rapid results returned in real-time to investigators.

  9. X-ray fluorescence analysis for trace element determination in foodstuff chemistry

    International Nuclear Information System (INIS)

    Wildanger, W.

    The physical fundamentals of X-ray fluorescence analysis are given and the routine spectrometers described. The basic principles are given of analytical methods used in qualitative and quantitative fluorescence analyses. Examples are given of the use of the method in a number of fields and the possibility and usefulness is discussed for the determination of trace elements in foodstuffs. The preparation of samples, preliminary concentration of components and calibration methods are discussed. (M.K.)

  10. Study of the elemental composition of Chenopodium Quinoa Willd by fast neutron activation analysis and X ray fluorescence analysis

    International Nuclear Information System (INIS)

    Soto Moran, R.L.; Szegedi, S.; Llopiz, J.L.

    1996-01-01

    By means of x-ray fluorescence and fast neutron activation analysis the nitrogen content has been determined in samples of roots, stems, leaf, flowers and grains from Quinua (Chenopodium Quinoa Willd), which was previously treated with fertilizer

  11. Forensic analysis of laser printed ink by X-ray fluorescence and laser-excited plume fluorescence.

    Science.gov (United States)

    Chu, Po-Chun; Cai, Bruno Yue; Tsoi, Yeuk Ki; Yuen, Ronald; Leung, Kelvin S Y; Cheung, Nai-Ho

    2013-05-07

    We demonstrated a minimally destructive two-tier approach for multielement forensic analysis of laser-printed ink. The printed document was first screened using a portable-X-ray fluorescence (XRF) probe. If the results were not conclusive, a laser microprobe was then deployed. The laser probe was based on a two-pulse scheme: the first laser pulse ablated a thin layer of the printed ink; the second laser pulse at 193 nm induced multianalytes in the desorbed ink to fluoresce. We analyzed four brands of black toners. The toners were printed on paper in the form of patches or letters or overprinted on another ink. The XRF probe could sort the four brands if the printed letters were larger than font 20. It could not tell the printing sequence in the case of overprints. The laser probe was more discriminatory; it could sort the toner brands and reveal the overprint sequence regardless of font size while the sampled area was not visibly different from neighboring areas even under the microscope. In terms of general analytical performance, the laser probe featured tens of micrometer lateral resolution and tens to hundreds of nm depth resolution and atto-mole mass detection limits. It could handle samples of arbitrary size and shape and was air compatible, and no sample pretreatment was necessary. It will prove useful whenever high-resolution and high sensitivity 3D elemental mapping is required.

  12. [Lake algae chemotaxonomy technology based on fluorescence excitation emission matrix and parallel factor analysis].

    Science.gov (United States)

    Chen, Xiao-Na; Han, Xiu-Rong; Su, Rong-Guo; Shi, Xiao-Yong

    2014-03-01

    An in vivo three-dimensional fluorescence method for the determination of algae community structure was developed by parallel factor (PARAFAC) analysis and CHEMTAX. The PARAFAC model was applied to fluorescence excitation-emission matrix (EEM) of 23 algae species and 12 fluorescent components were identified according to the residual sum of squares and specificity of the composition profiles of fluorescent. Based on the 12 fluorescent components, the algae species at different growth stages were correctly classified at the division level using Bayesian discriminant analysis (BDA). Then the reference fluorescent component ratio matrix was constructed for CHEMTAX, and the EEM-PARAFAC-CHEMTAX method was developed to differentiate taxonomic groups of algae. When the fluorometric method was used for 531 single-species samples, the average correct discrimination ratio (CDR) was 99.1% and the correct discrimination ratios (CDRs) were 100% at the division level except Chlorophyta, the CDR of which was 97.5%. The CDRs for 95 mixtures were above 98.5% for the dominant algae species and above 90.5% for the subdominant algae species, with average relative contents of 69.7% and 26.4%, respectively. This technique would be of great aid when low-cost and rapid analysis is needed for samples in a large batch.

  13. A general method of analysis of ligand binding to competing macromolecules using the spectroscopic signal originating from a reference macromolecule. Application to Escherichia coli replicative helicase DnaB protein nucleic acid interactions.

    Science.gov (United States)

    Jezewska, M J; Bujalowski, W

    1996-02-20

    Quantitative and accurate analyses of protein-nucleic acid interactions in solution are greatly facilitated if the formation of the complex is accompanied by a large change of the spectroscopic signal (e.g., fluorescence) originating from the protein or nucleic acid. However, there are many instances when protein-nucleic acid interactions do not induce adequate changes in spectroscopic properties of the interacting macromolecules. We describe the theoretical and experimental aspects of a general method to analyze such protein-nucleic acid interactions. The method is based on quantitative titrations of a reference nucleic acid with the protein in the presence of a competing nucleic acid whose interaction parameters with the protein are to be determined. The Macromolecule Competition Titration (MCT) method allows for the determination of the absolute average binding density and the free protein ligand concentration over a large binding density range, unavailable by other methods, and construction of a model-independent true binding isotherm. Moreover, the determination of the absolute binding density of the ligand on nonfluorescent nucleic acid is independent of a priori knowledge of the binding characteristics of the protein to the reference fluorescent nucleic acid. Although the MCT method is applicable to any type of physicochemical signal that can be used to monitor the binding, we discuss the details of the method as it applies to the analysis monitored by a change in the nucleic acid fluorescence intensity and anisotropy upon binding a ligand. Moreover, the interaction parameters for a given nucleic acid can be determined by using as a reference the long polymer nucleic acid as well as short oligomers. In particular, the analysis is greatly simplified if the short fluorescent nucleic acid fragment, spanning the exact site-size of the complex and binding with only a 1:1 stoichiometry to the protein, is used as a reference macromolecule. We have illustrated the

  14. Instrumental analysis of bacterial cells using vibrational and emission Moessbauer spectroscopic techniques

    Energy Technology Data Exchange (ETDEWEB)

    Kamnev, Alexander A. [Laboratory of Biochemistry of Plant-Bacterial Symbioses, Institute of Biochemistry and Physiology of Plants and Microorganisms, Russian Academy of Sciences, 410049 Saratov (Russian Federation)]. E-mail: aakamnev@ibppm.sgu.ru; Tugarova, Anna V. [Laboratory of Biochemistry of Plant-Bacterial Symbioses, Institute of Biochemistry and Physiology of Plants and Microorganisms, Russian Academy of Sciences, 410049 Saratov (Russian Federation); Antonyuk, Lyudmila P. [Laboratory of Biochemistry of Plant-Bacterial Symbioses, Institute of Biochemistry and Physiology of Plants and Microorganisms, Russian Academy of Sciences, 410049 Saratov (Russian Federation); Tarantilis, Petros A. [Laboratory of Chemistry, Department of Science, Agricultural University of Athens, 11855 Athens (Greece); Kulikov, Leonid A. [Laboratory of Nuclear Chemistry Techniques, Department of Radiochemistry, Faculty of Chemistry, M.V. Lomonosov Moscow State University, 119992 Moscow (Russian Federation); Perfiliev, Yurii D. [Laboratory of Nuclear Chemistry Techniques, Department of Radiochemistry, Faculty of Chemistry, M.V. Lomonosov Moscow State University, 119992 Moscow (Russian Federation); Polissiou, Moschos G. [Laboratory of Chemistry, Department of Science, Agricultural University of Athens, 11855 Athens (Greece); Gardiner, Philip H.E. [Division of Chemistry, School of Science and Mathematics, Sheffield Hallam University, Sheffield S1 1WB (United Kingdom)

    2006-07-28

    In biosciences and biotechnology, the expanding application of physicochemical approaches using modern instrumental techniques is an efficient strategy to obtain valuable and often unique information at the molecular level. In this work, we applied a combination of vibrational (Fourier transform infrared (FTIR), FT-Raman) spectroscopic techniques, useful in overall structural and compositional analysis of bacterial cells of the rhizobacterium Azospirillum brasilense, with {sup 57}Co emission Moessbauer spectroscopy (EMS) used for sensitive monitoring of metal binding and further transformations in live bacterial cells. The information obtained, together with ICP-MS analyses for metals taken up by the bacteria, is useful in analysing the impact of the environmental conditions (heavy metal stress) on the bacterial metabolism and some differences in the heavy metal stress-induced behaviour of non-endophytic (Sp7) and facultatively endophytic (Sp245) strains. The results show that, while both strains Sp7 and Sp245 take up noticeable and comparable amounts of heavy metals from the medium (0.12 and 0.13 mg Co, 0.48 and 0.44 mg Cu or 4.2 and 2.1 mg Zn per gram of dry biomass, respectively, at a metal concentration of 0.2 mM in the medium), their metabolic responses differ essentially. Whereas for strain Sp7 the FTIR measurements showed significant accumulation of polyhydroxyalkanoates as storage materials involved in stress endurance, strain Sp245 did not show any major changes in cellular composition. Nevertheless, EMS measurements showed rapid binding of cobalt(II) by live bacterial cells (chemically similar to metal binding by dead bacteria) and its further transformation in the live cells within an hour.

  15. Spectroscopic, microscopic, and internal stress analysis in cadmium telluride grown by close-space sublimation

    International Nuclear Information System (INIS)

    Manciu, Felicia S.; Salazar, Jessica G.; Diaz, Aryzbe; Quinones, Stella A.

    2015-01-01

    High quality materials with excellent ordered structure are needed for developing photovoltaic and infrared devices. With this end in mind, the results of our research prove the importance of a detailed, comprehensive spectroscopic and microscopic analysis in assessing cadmium telluride (CdTe) characteristics. The goal of this work is to examine not only material crystallinity and morphology, but also induced stress in the deposit material. A uniform, selective growth of polycrystalline CdTe by close-space sublimation on patterned Si(111) and Si(211) substrates is demonstrated by scanning electron microscopy images. Besides good crystallinity of the samples, as revealed by both Raman scattering and Fourier transform infrared absorption investigations, the far-infrared transmission data also show the presence of surface optical phonon modes, which is direct evidence of confinement in such a material. The qualitative identification of the induced stress was achieved by performing confocal Raman mapping microscopy on sample surfaces and by monitoring the existence of the rock-salt and zinc-blende structural phases of CdTe, which were associated with strained and unstrained morphologies, respectively. Although the induced stress in the material is still largely due to the high lattice mismatch between CdTe and the Si substrate, the current results provide a direct visualization of its partial release through the relaxation effect at crystallite boundaries and of preferential growth directions of less strain. Our study, thus offers significant value for improvement of material properties, by targeting the needed adjustments in the growth processes. - Highlights: • Assessing the characteristics of CdTe deposited on patterned Si substrates • Proving the utility of confocal Raman microscopy in monitoring the induced stress • Confirming the partial stress release through the grain boundary relaxation effect • Demonstrating the phonon confinement effect in low

  16. Instrumental analysis of bacterial cells using vibrational and emission Moessbauer spectroscopic techniques

    International Nuclear Information System (INIS)

    Kamnev, Alexander A.; Tugarova, Anna V.; Antonyuk, Lyudmila P.; Tarantilis, Petros A.; Kulikov, Leonid A.; Perfiliev, Yurii D.; Polissiou, Moschos G.; Gardiner, Philip H.E.

    2006-01-01

    In biosciences and biotechnology, the expanding application of physicochemical approaches using modern instrumental techniques is an efficient strategy to obtain valuable and often unique information at the molecular level. In this work, we applied a combination of vibrational (Fourier transform infrared (FTIR), FT-Raman) spectroscopic techniques, useful in overall structural and compositional analysis of bacterial cells of the rhizobacterium Azospirillum brasilense, with 57 Co emission Moessbauer spectroscopy (EMS) used for sensitive monitoring of metal binding and further transformations in live bacterial cells. The information obtained, together with ICP-MS analyses for metals taken up by the bacteria, is useful in analysing the impact of the environmental conditions (heavy metal stress) on the bacterial metabolism and some differences in the heavy metal stress-induced behaviour of non-endophytic (Sp7) and facultatively endophytic (Sp245) strains. The results show that, while both strains Sp7 and Sp245 take up noticeable and comparable amounts of heavy metals from the medium (0.12 and 0.13 mg Co, 0.48 and 0.44 mg Cu or 4.2 and 2.1 mg Zn per gram of dry biomass, respectively, at a metal concentration of 0.2 mM in the medium), their metabolic responses differ essentially. Whereas for strain Sp7 the FTIR measurements showed significant accumulation of polyhydroxyalkanoates as storage materials involved in stress endurance, strain Sp245 did not show any major changes in cellular composition. Nevertheless, EMS measurements showed rapid binding of cobalt(II) by live bacterial cells (chemically similar to metal binding by dead bacteria) and its further transformation in the live cells within an hour

  17. Analysis of heavy metals during composting of the tannery sludge using physicochemical and spectroscopic techniques.

    Science.gov (United States)

    Haroun, Mahdi; Idris, Azni; Omar, Syed

    2009-06-15

    The major limitation of direct application of tannery sludge compost in agriculture is the total heavy metal contents and their bioavailability to the soil-plant system. This study focused on the heavy metal characterization and the influence of changing the physicochemical properties of the medium throughout the composting on the concentrations, bioavailability or chemical forms of Cr, Cu, Zn, Pb and Cd in tannery sludge. The study shows that throughout the 60 days of composting, physicochemical analysis and Fourier-transformed infrared (FTIR) spectroscopic characterization show that all parameters elaborated and reached relatively stable levels reflecting the stability and maturity of the final product, and revealed the biodegradation of components that can be easily assimilated by microorganism. The C/N ratio reaches the optimal range of stable compost; inorganic nitrogen is transformed into stable organic forms. The total concentration of Cr, Zn, Cu, Pb and Cd is very low rendering final compost acceptable for agricultural use. The germination index for both Chinese cabbage and lettuce was 97% after 60 days of composting, showing that the final compost was not phytotoxic. Furthermore, in using a sequential extraction method in sludge compost at different phases of treatment, a less than 2% of metals bound to bioavailable fractions X-(KNO(3)+H(2)O). A large proportion of the heavy metals were associated to the residual fraction (75-85%) and more resistant fractions to extraction X-NaOH, X-EDTA, X-HNO(3) (15-25%). Mobile fractions of metals are poorly predictable from the total content. Bioavailability of all fractions of elements tends to decrease.

  18. Chemical analysis of surface oxygenated moieties of fluorescent carbon nanoparticles

    Science.gov (United States)

    Huang, Jie; Deming, Christopher P.; Song, Yang; Kang, Xiongwu; Zhou, Zhi-You; Chen, Shaowei

    2012-01-01

    Water-soluble carbon nanoparticles were prepared by refluxing natural gas soot in concentrated nitric acid. The surface of the resulting nanoparticles was found to be decorated with a variety of oxygenated species, as suggested by spectroscopic measurements. Back potentiometric titration of the nanoparticles was employed to quantify the coverage of carboxylic, lactonic, and phenolic moieties on the particle surface by taking advantage of their vast difference of acidity (pKa). The results were largely consistent with those reported in previous studies with other carbonaceous (nano)materials. Additionally, the presence of ortho- and para-quinone moieties on the nanoparticle surface was confirmed by selective labelling with o-phenylenediamine, as manifested in X-ray photoelectron spectroscopy, photoluminescence, and electrochemical measurements. The results further supported the arguments that the surface functional moieties that were analogous to 9,10-phenanthrenequinone were responsible for the unique photoluminescence of the nanoparticles and the emission might be regulated by surface charge state, as facilitated by the conjugated graphitic core matrix.

  19. Chemical analysis of surface oxygenated moieties of fluorescent carbon nanoparticles.

    Science.gov (United States)

    Huang, Jie; Deming, Christopher P; Song, Yang; Kang, Xiongwu; Zhou, Zhi-You; Chen, Shaowei

    2012-02-07

    Water-soluble carbon nanoparticles were prepared by refluxing natural gas soot in concentrated nitric acid. The surface of the resulting nanoparticles was found to be decorated with a variety of oxygenated species, as suggested by spectroscopic measurements. Back potentiometric titration of the nanoparticles was employed to quantify the coverage of carboxylic, lactonic, and phenolic moieties on the particle surface by taking advantage of their vast difference of acidity (pK(a)). The results were largely consistent with those reported in previous studies with other carbonaceous (nano)materials. Additionally, the presence of ortho- and para-quinone moieties on the nanoparticle surface was confirmed by selective labelling with o-phenylenediamine, as manifested in X-ray photoelectron spectroscopy, photoluminescence, and electrochemical measurements. The results further supported the arguments that the surface functional moieties that were analogous to 9,10-phenanthrenequinone were responsible for the unique photoluminescence of the nanoparticles and the emission might be regulated by surface charge state, as facilitated by the conjugated graphitic core matrix. This journal is © The Royal Society of Chemistry 2012

  20. Bright field microscopy as an alternative to whole cell fluorescence in automated analysis of macrophage images.

    Directory of Open Access Journals (Sweden)

    Jyrki Selinummi

    2009-10-01

    Full Text Available Fluorescence microscopy is the standard tool for detection and analysis of cellular phenomena. This technique, however, has a number of drawbacks such as the limited number of available fluorescent channels in microscopes, overlapping excitation and emission spectra of the stains, and phototoxicity.We here present and validate a method to automatically detect cell population outlines directly from bright field images. By imaging samples with several focus levels forming a bright field -stack, and by measuring the intensity variations of this stack over the -dimension, we construct a new two dimensional projection image of increased contrast. With additional information for locations of each cell, such as stained nuclei, this bright field projection image can be used instead of whole cell fluorescence to locate borders of individual cells, separating touching cells, and enabling single cell analysis. Using the popular CellProfiler freeware cell image analysis software mainly targeted for fluorescence microscopy, we validate our method by automatically segmenting low contrast and rather complex shaped murine macrophage cells.The proposed approach frees up a fluorescence channel, which can be used for subcellular studies. It also facilitates cell shape measurement in experiments where whole cell fluorescent staining is either not available, or is dependent on a particular experimental condition. We show that whole cell area detection results using our projected bright field images match closely to the standard approach where cell areas are localized using fluorescence, and conclude that the high contrast bright field projection image can directly replace one fluorescent channel in whole cell quantification. Matlab code for calculating the projections can be downloaded from the supplementary site: http://sites.google.com/site/brightfieldorstaining.

  1. Binding affinities of Schiff base Fe(II) complex with BSA and calf-thymus DNA: Spectroscopic investigations and molecular docking analysis.

    Science.gov (United States)

    Rudra, Suparna; Dasmandal, Somnath; Patra, Chiranjit; Kundu, Arjama; Mahapatra, Ambikesh

    2016-09-05

    The binding interaction of a synthesized Schiff base Fe(II) complex with biological macromolecules viz., bovine serum albumin (BSA) and calf thymus(ct)-DNA have been investigated using different spectroscopic techniques coupled with viscosity measurements at physiological pH and 298K. Regular amendments in emission intensities of BSA upon the action of the complex indicate significant interaction between them, and the binding interaction have been characterized by Stern Volmer plots and thermodynamic binding parameters. On the basis of this quenching technique one binding site with binding constant (Kb=(7.6±0.21)×10(5)) between complex and protein have been obtained at 298K. Time-resolved fluorescence studies have also been encountered to understand the mechanism of quenching induced by the complex. Binding affinities of the complex to the fluorophores of BSA namely tryptophan (Trp) and tyrosine (Tyr) have been judged by synchronous fluorescence studies. Secondary structural changes of BSA rooted by the complex has been revealed by CD spectra. On the other hand, hypochromicity of absorption spectra of the complex with the addition of ct-DNA and the gradual reduction in emission intensities of ethidium bromide bound ct-DNA in presence of the complex indicate noticeable interaction between ct-DNA and the complex with the binding constant (4.2±0.11)×10(6)M(-1). Life-time measurements have been studied to determine the relative amplitude of binding of the complex to ct-DNA base pairs. Mode of binding interaction of the complex with ct-DNA has been deciphered by viscosity measurements. CD spectra have also been used to understand the changes in ct-DNA structure upon binding with the metal complex. Density functional theory (DFT) and molecular docking analysis have been employed in highlighting the interactive phenomenon and binding location of the complex with the macromolecules. Copyright © 2016 Elsevier B.V. All rights reserved.

  2. X-ray fluorescence analysis of thin films at glancing-incident and -takeoff angles

    International Nuclear Information System (INIS)

    Tsuji, K.; Sato, S.; Hirokawa, K.

    1995-01-01

    We have developed a new analytical method, Glancing-Incidence and -Takeoff X-Ray Fluorescence (GIT-XRF) method for the first time. Here, we present an idea for a thin-film analysis and a surface analysis by the GIT-XRF method. In this method, the dependence of the fluorescent x-ray intensity on takeoff angle is measured at various incident angles of the primary x-ray. Compared with a total reflection x-ray fluorescence method, the GIT-XRF method allows a detailed thin-film analysis, because the thin film is cross-checked by many experimental curves. Moreover, a surface-sensitive analysis is also possible by the GIT-XRF method. (author)

  3. Spectroscopic identification of rare earth elements in phosphate glass

    Science.gov (United States)

    Devangad, Praveen; Tamboli, Maktum; Muhammed Shameem, K. M.; Nayak, Rajesh; Patil, Ajeetkumar; Unnikrishnan, V. K.; Santhosh, C.; Kumar, G. A.

    2018-01-01

    In this work, rare earth-doped phosphate glasses were synthesized and characterized using three different spectroscopic techniques. The absorption spectra of the prepared praseodymium (Pr) and samarium (Sm) doped glasses, recorded by a UV–VIS-NIR spectrophotometer, show the characteristic absorption bands of these elements. To confirm this inference, laser-induced fluorescence spectra of Pr and Sm were obtained at a laser excitation of 442 nm. Their emission bands are reported here. The elemental analysis of these samples was carried out using a laser-induced breakdown spectroscopy (LIBS) system. Characteristic emission lines of Pr and Sm have been identified and reported by the recorded LIBS spectra of glass samples. Results prove that using these three complimentary spectroscopic techniques (absorption, fluorescence and LIBS), we can meaningfully characterize rare earth-doped glass samples.

  4. Fluorescence-Intensity Distribution Analysis and Its Application in Biomolecular Detection Technology

    Science.gov (United States)

    Kask, Peet; Palo, Kaupo; Ullmann, Dirk; Gall, Karsten

    1999-11-01

    A methodology, fluorescence-intensity distribution analysis, has been developed for confocal microscopy studies in which the fluorescence intensity of a sample with a heterogeneous brightness profile is monitored. An adjustable formula, modeling the spatial brightness distribution, and the technique of generating functions for calculation of theoretical photon count number distribution serve as the two cornerstones of the methodology. The method permits the simultaneous determination of concentrations and specific brightness values of a number of individual fluorescent species in solution. Accordingly, we present an extremely sensitive tool to monitor the interaction of fluorescently labeled molecules or other microparticles with their respective biological counterparts that should find a wide application in life sciences, medicine, and drug discovery. Its potential is demonstrated by studying the hybridization of 5'-(6-carboxytetramethylrhodamine)-labeled and nonlabeled complementary oligonucleotides and the subsequent cleavage of the DNA hybrids by restriction enzymes.

  5. [Automated fluorescent analysis of STR profiling and sex determination].

    Science.gov (United States)

    Jiang, B; Liang, S; Guo, J

    2000-08-01

    Denaturing PAGE coupled with the ABI377 fluorescent automated DNA sequencer was used to test the performance and reproducibility of the automated DNA profiling systems at vWA31A, TH01, F13A01, FES, TPOX, CSF1PO and Amelogenin gene. The allele designation windows at the 7 genetic markers were established and implemented into the genotype reading software. Alleles differing in just 1 bp in length could easily be discriminated. Furthermore, the interpretation guidelines were outlined for the 7 genetic systems by investigating the relative peak areas of heterozygote peaks and relative stutter peak areas in various monoplex systems. Our results indicate that if the ratio between two peaks is equal to or higher than 0.404, a herozygote could be determined, otherwise the homozygote be made.

  6. Analysis of solar blocker through portable X-ray fluorescence

    International Nuclear Information System (INIS)

    Ferreira, Diego de Dio; Melquiades, Fabio Luiz; Appoloni, Carlos Roberto; Lopes, Fabio; Lonni, Audrey Stinghen G.; Oliveira, Frederico Minardi de; Duarte, Jose C.

    2009-01-01

    This paper estimates the concentration of TiO 2 by Energy Dispersion X-ray fluorescence (EDXRF) viewing t obtain the FPS due to the physical barrier in the composition of solar blockers, and identifies possible present metals in the samples. A portable EDXRF equipment was used and 27 commercial of different brands and solar protection factors were analysed. Also, three formulations (A, B and C) were prepared and measured estimated in FPS-30 using 5% or TiO 2 . The quantification was performed through calibration curves with 1% to 30% standards of TiO 2 . As result, it was possible to determine the contribution to physical protection in the FPS, associated to the Ti concentration present in some solar blocker samples available in the market. Also, it was possible to detect the presence of various metals in solar protectors, such as Fe, Zn, Br and Sr, and identify chemical elements which were not mentioned and their formulation as well

  7. Theoretical study on X-Ray Fluorescence Analysis: Contribution of the self-excitation phenomenon

    International Nuclear Information System (INIS)

    RAKOTONDRAJAONA, H.N.J.L.

    1999-01-01

    This work consist in setting up, firstly, fluorescence intensities due to the contribution of secondary and tertiary excitation phenomena which settle among the elements of the same sample during the analysis through X fluorescence, inspired by Sherman calculations. Secondly, we have experimentally checked these expression from the analysis of twelve samples; containing all the following elements: Iron, Copper and Zinc. The difference between the theoretical results and the experimental results has been valued from the formula of the test of χ 2 . We consider that this difference is noticeable compared to other errors due to analysis method. [fr

  8. Benzoxazinone derivatives: new fluorescent probes for two-color flow cytometry analysis using one excitation wavelength.

    Science.gov (United States)

    Monsigny, M; Midoux, P; Le Bris, M T; Roche, A C; Valeur, B

    1989-01-01

    A new class of fluorescent dye which upon excitation at 488 nm turns red is shown to be probe-suitable for using in flow cytometry alone or in conjunction with fluorescein derivatives. 7-dimethylamino 3-(p-formylstyryl) 1,4 benzoxazin 2-one is suitable for rendering microorganisms, such as Plasmodium merozoites and cells detectable by flow cytometry, allowing a dual fluorescence analysis when the cells are labelled with suitable fluoresceinylated ligands such as fluorescein labeled neoglycoproteins or antibodies. The synthesis of the new benzoxazinone derivatives is described: p-[beta-(7-dimethylamino 1,4 benzoxazin 2-one 3-yl)-vinyl]-phenylpropenoic acid can be easily activated as a hydroxysuccinimide derivative and linked to amino groups of polypeptides. Hydrophilic polypeptides such as poly-L-lysine or glycosylated polymers combined with this new fluorescent dye are shown to be helpful in analyzing cell surface receptors, in dual fluorescence flow cytometry analysis, using a single excitation wavelength and two sets of compounds labeled with the new benzoxazinone derivative and with fluorescein isothiocyanate, respectively. The new benzoxazinone derivative has a high molar absorbance, a good quantum yield fluorescence when it is bound to hydrophilic polypeptides and its fluorescence intensity is not dependent on pH in the physiological pH range.

  9. Analysis of Septin Reorganization at Cytokinesis Using Polarized Fluorescence Microscopy

    Directory of Open Access Journals (Sweden)

    Molly McQuilken

    2017-05-01

    Full Text Available Septins are conserved filament-forming proteins that act in diverse cellular processes. They closely associate with membranes and, in some systems, components of the cytoskeleton. It is not well understood how filaments assemble into higher-order structures in vivo or how they are remodeled throughout the cell cycle. In the budding yeast S. cerevisiae, septins are found through most of the cell cycle in an hourglass organization at the mother-bud neck until cytokinesis when the collar splits into two rings that disassemble prior to the next cell cycle. Experiments using polarized fluorescence microscopy have suggested that septins are arranged in ordered, paired filaments in the hourglass and undergo a coordinated 90° reorientation during splitting at cytokinesis. This apparent reorganization could be due to two orthogonal populations of filaments disassembling and reassembling or being preferentially retained at cytokinesis. In support of this idea, we report a decrease in septin concentration at the mother-bud neck during cytokinesis consistent with other reports and the timing of the decrease depends on known septin regulators including the Gin4 kinase. We took a candidate-based approach to examine what factors control reorientation during splitting and used polarized fluorescence microscopy to screen mutant yeast strains deficient in septin interacting proteins. Using this method, we have linked known septin regulators to different aspects of the assembly, stability, and reorganization of septin assemblies. The data support that ring splitting requires Gin4 activity and an anillin-like protein Bud4, and normal accumulation of septins at the ring requires phosphorylation of Shs1. We found distinct regulatory requirements for septin organization in the hourglass compared to split rings. We propose that septin subpopulations can vary in their localization and assembly/disassembly behavior in a cell-cycle dependent manner at cytokinesis.

  10. Analysis of the Interaction of Dp44mT with Human Serum Albumin and Calf Thymus DNA Using Molecular Docking and Spectroscopic Techniques

    Directory of Open Access Journals (Sweden)

    Zhongjie Xu

    2016-06-01

    Full Text Available Di-2-pyridylketone-4,4,-dimethyl-3-thiosemicarbazone (Dp44mT exhibits significant antitumor activity. However, the mechanism of its pharmacological interaction with human serum albumin (HSA and DNA remains poorly understood. Here, we aimed to elucidate the interactions of Dp44mT with HSA and DNA using MTT assays, spectroscopic methods, and molecular docking analysis. Our results indicated that addition of HSA at a ratio of 1:1 did not alter the cytotoxicity of Dp44mT, but did affect the cytotoxicity of the Dp44mT-Cu complex. Data from fluorescence quenching and UV-VIS absorbance measurements demonstrated that Dp44mT could bind to HSA with a moderate affinity (Ka = approximately 104 M−1. CD spectra revealed that Dp44mT could slightly disrupt the secondary structure of HSA. Dp44mT could also interact with Ct-DNA, but had a moderate binding constant (KEB = approximately 104 M−1. Docking studies indicated that the IB site of HSA, but not the IIA and IIIA sites, could be favorable for Dp44mT and that binding of Dp44mT to HSA involved hydrogen bonds and hydrophobic force, consistent with thermodynamic results from spectral investigations. Thus, the moderate binding affinity of Dp44mT with HSA and DNA partially contributed to its antitumor activity and may be preferable in drug design approaches.

  11. Spectroscopic investigation on interaction and sonodynamic damage of Riboflavin to DNA under ultrasonic irradiation by using Methylene Blue as fluorescent probe

    Science.gov (United States)

    Wang, Qi; Wu, Qiong; Wang, Jun; Chen, Dandan; Fan, Ping; Wang, Baoxin

    2014-01-01

    In this paper, the Riboflavin (RF) as a sonosensitizer and Methylene Blue (MB) as a fluorescent probe were used to study the interaction and sonodynamic damage to Deoxyribonucleic Acid (DNA) by fluorescence and UV-vis spectroscopy. The results showed that the RF could efficiently bind to DNA in aqueous solution and exchange with the MB through competing reaction. And then, under ultrasonic irradiation, the RF could obviously damage the DNA. In addition, the influencing factors such as ultrasonic irradiation time and RF concentration on the sonodynamic damage to DNA were also considered. The experimental results showed that the sonodynamic damage degree increase with the increase of ultrasonic irradiation time and RF concentration. Perhaps, this paper may offer some important subjects for broadening the application of RF in sonodynamic therapy (SDT) technologies for tumor treatment.

  12. The effect of thermal treatment on the enhancement of detection of adulteration in extra virgin olive oils by synchronous fluorescence spectroscopy and chemometric analysis

    Science.gov (United States)

    Mabood, F.; Boqué, R.; Folcarelli, R.; Busto, O.; Jabeen, F.; Al-Harrasi, Ahmed; Hussain, J.

    2016-05-01

    In this study the effect of thermal treatment on the enhancement of synchronous fluorescence spectroscopic method for discrimination and quantification of pure extra virgin olive oil (EVOO) samples from EVOO samples adulterated with refined oil was investigated. Two groups of samples were used. One group was analyzed at room temperature (25 °C) and the other group was thermally treated in a thermostatic water bath at 75 °C for 8 h, in contact with air and with light exposure, to favor oxidation. All the samples were then measured with synchronous fluorescence spectroscopy. Synchronous fluorescence spectra were acquired by varying the wavelength in the region from 250 to 720 nm at 20 nm wavelength differential interval of excitation and emission. Pure and adulterated olive oils were discriminated by using partial least-squares discriminant analysis (PLS-DA). It was found that the best PLS-DA models were those built with the difference spectra (75 °C-25 °C), which were able to discriminate pure from adulterated oils at a 2% level of adulteration of refined olive oils. Furthermore, PLS regression models were also built to quantify the level of adulteration. Again, the best model was the one built with the difference spectra, with a prediction error of 3.18% of adulteration.

  13. Spectroscopic analysis of 8-hydroxyquinoline derivatives and investigation of its reactive properties by DFT and molecular dynamics simulations

    Science.gov (United States)

    Sureshkumar, B.; Mary, Y. Sheena; Resmi, K. S.; Panicker, C. Yohannan; Armaković, Stevan; Armaković, Sanja J.; Van Alsenoy, C.; Narayana, B.; Suma, S.

    2018-03-01

    Two 8-hydroxyquinoline derivatives, 5,7-dichloro-8-hydroxyquinoline (57DC8HQ) and 5-chloro-7-iodo-8-hydroxy quinoline (5CL7I8HQ) have been investigated in details by means of spectroscopic characterization and computational molecular modelling techniques. FT-IR and FT-Raman experimental spectroscopic approaches have been utilized in order to obtain detailed spectroscopic signatures of title compounds, while DFT calculations have been used in order to visualize and assign vibrations. The computed values of dipole moment, polarizability and hyperpolarizability indicate that the title molecules exhibit NLO properties. The evaluated HOMO and LUMO energies demonstrate the chemical stability of the molecules. NBO analysis is made to study the stability of the molecules arising from hyperconjugative interactions and charge delocalization. DFT calculations have been also used jointly with MD simulations in order to investigate in details global and local reactivity properties of title compounds. Also, molecular docking has been also used in order to investigate affinity of title compounds against decarboxylase inhibitor and quinoline derivatives can be a lead compounds for developing new antiparkinsonian drug.

  14. Raman spectroscopic analysis of human tissue engineered oral mucosa constructs (EVPOME) perturbed by physical and biochemical methods

    Science.gov (United States)

    Khmaladze, Alexander; Ganguly, Arindam; Raghavan, Mekhala; Kuo, Shiuhyang; Cole, Jacqueline H.; Marcelo, Cynthia L.; Feinberg, Stephen E.; Izumi, Kenji; Morris, Michael D.

    2012-01-01

    We show the application of near-infrared Raman Spectroscopy to in-vitro monitoring of the viability of tissue constructs (EVPOMEs). During their two week production period EVPOME may encounter thermal, chemical or biochemical stresses that could cause development to cease, rendering the affected constructs useless. We discuss the development of a Raman spectroscopic technique to study EVPOMEs noninvasively, with the ultimate goal of applying it in-vivo. We identify Raman spectroscopic failure indicators for EVPOMEs, which are stressed by temperature, and discuss the implications of varying calcium concentration and pre-treatment of the human keratinocytes with Rapamycin. In particular, Raman spectra show correlation of the peak height ratios of CH2 deformation to phenylalanine ring breathing, providing a Raman metric to distinguish between viable and nonviable constructs. We also show the results of singular value decomposition analysis, demonstrating the applicability of Raman spectroscopic technique to both distinguish between stressed and non-stressed EVPOME constructs, as well as between EVPOMEs and bare AlloDerm® substrates, on which the oral keratinocytes have been cultured. We also discuss complications arising from non-uniform thickness of the AlloDerm® substrate and the cultured constructs, as well as sampling protocols used to detect local stress and other problems that may be encountered in the constructs.

  15. Non-Destructive Spectroscopic Techniques and Multivariate Analysis for Assessment of Fat Quality in Pork and Pork Products: A Review

    Science.gov (United States)

    Kucha, Christopher T.; Liu, Li; Ngadi, Michael O.

    2018-01-01

    Fat is one of the most important traits determining the quality of pork. The composition of the fat greatly influences the quality of pork and its processed products, and contribute to defining the overall carcass value. However, establishing an efficient method for assessing fat quality parameters such as fatty acid composition, solid fat content, oxidative stability, iodine value, and fat color, remains a challenge that must be addressed. Conventional methods such as visual inspection, mechanical methods, and chemical methods are used off the production line, which often results in an inaccurate representation of the process because the dynamics are lost due to the time required to perform the analysis. Consequently, rapid, and non-destructive alternative methods are needed. In this paper, the traditional fat quality assessment techniques are discussed with emphasis on spectroscopic techniques as an alternative. Potential spectroscopic techniques include infrared spectroscopy, nuclear magnetic resonance and Raman spectroscopy. Hyperspectral imaging as an emerging advanced spectroscopy-based technology is introduced and discussed for the recent development of assessment for fat quality attributes. All techniques are described in terms of their operating principles and the research advances involving their application for pork fat quality parameters. Future trends for the non-destructive spectroscopic techniques are also discussed. PMID:29382092

  16. AN IMPROVED SPECTROSCOPIC ANALYSIS OF DA WHITE DWARFS FROM THE SLOAN DIGITAL SKY SURVEY DATA RELEASE 4

    International Nuclear Information System (INIS)

    Tremblay, P.-E.; Bergeron, P.; Gianninas, A.

    2011-01-01

    We present an improved spectroscopic and photometric analysis of hydrogen-line DA white dwarfs from the Sloan Digital Sky Survey Data Release 4 (SDSS DR4) based on model atmospheres that include improved Stark broadening profiles with non-ideal gas effects. We also perform a careful visual inspection of all spectroscopic fits with high signal-to-noise ratios (S/Ns > 12) and present improved atmospheric parameters (T eff and log g) for each white dwarf. Through a comparison of spectroscopic and photometric temperatures, we report the discovery of 35 DA+DB/DC double degenerate candidates and two helium-rich DA stars. We also determine that a cutoff at S/N = 15 optimizes the size and quality of the sample for computing the mean mass of DA white dwarfs, for which we report a value of 0.613 M sun . We compare our results to previous analyses of the SDSS DR4 and find a good agreement if we account for the shift produced by the improved Stark profiles. Finally, the properties of DA white dwarfs in the SDSS are weighed against those of the Villanova White Dwarf Catalog sample of Gianninas et al. We find systematically lower masses (by about 3% on average), a difference that we trace back to the data reduction procedure of the SDSS. We conclude that a better understanding of these differences will be important to determine the absolute temperature scale and mean mass of DA white dwarfs.

  17. Non-Destructive Spectroscopic Techniques and Multivariate Analysis for Assessment of Fat Quality in Pork and Pork Products: A Review.

    Science.gov (United States)

    Kucha, Christopher T; Liu, Li; Ngadi, Michael O

    2018-01-28

    Fat is one of the most important traits determining the quality of pork. The composition of the fat greatly influences the quality of pork and its processed products, and contribute to defining the overall carcass value. However, establishing an efficient method for assessing fat quality parameters such as fatty acid composition, solid fat content, oxidative stability, iodine value, and fat color, remains a challenge that must be addressed. Conventional methods such as visual inspection, mechanical methods, and chemical methods are used off the production line, which often results in an inaccurate representation of the process because the dynamics are lost due to the time required to perform the analysis. Consequently, rapid, and non-destructive alternative methods are needed. In this paper, the traditional fat quality assessment techniques are discussed with emphasis on spectroscopic techniques as an alternative. Potential spectroscopic techniques include infrared spectroscopy, nuclear magnetic resonance and Raman spectroscopy. Hyperspectral imaging as an emerging advanced spectroscopy-based technology is introduced and discussed for the recent development of assessment for fat quality attributes. All techniques are described in terms of their operating principles and the research advances involving their application for pork fat quality parameters. Future trends for the non-destructive spectroscopic techniques are also discussed.

  18. Maximum entropy analysis of polarized fluorescence decay of (E)GFP in aqueous solution

    Science.gov (United States)

    Novikov, Eugene G.; Skakun, Victor V.; Borst, Jan Willem; Visser, Antonie J. W. G.

    2018-01-01

    The maximum entropy method (MEM) was used for the analysis of polarized fluorescence decays of enhanced green fluorescent protein (EGFP) in buffered water/glycerol mixtures, obtained with time-correlated single-photon counting (Visser et al 2016 Methods Appl. Fluoresc. 4 035002). To this end, we used a general-purpose software module of MEM that was earlier developed to analyze (complex) laser photolysis kinetics of ligand rebinding reactions in oxygen binding proteins. We demonstrate that the MEM software provides reliable results and is easy to use for the analysis of both total fluorescence decay and fluorescence anisotropy decay of aqueous solutions of EGFP. The rotational correlation times of EGFP in water/glycerol mixtures, obtained by MEM as maxima of the correlation-time distributions, are identical to the single correlation times determined by global analysis of parallel and perpendicular polarized decay components. The MEM software is also able to determine homo-FRET in another dimeric GFP, for which the transfer correlation time is an order of magnitude shorter than the rotational correlation time. One important advantage utilizing MEM analysis is that no initial guesses of parameters are required, since MEM is able to select the least correlated solution from the feasible set of solutions.

  19. TRACE ANALYSIS BY LASER-EXCITED ATOMIC FLUORESCENCE WITH ATOMIZATION IN A PULSED PLASMA

    OpenAIRE

    Lunyov , O.; Oshemkov , S.; Petrov , A.

    1991-01-01

    The possibilities of plasma atomization for laser fluorescence trace analysis are discussed. Pulsed hot hollow cathode discharge was used for analysis of solutions and powdered samples. The high voltage spark and laser-induced breakdown (laser spark) were used as atomizers of metal-containing atmospheric aerosols. Detection limits were improved by means of temporal background selection.

  20. Analysis of Single-cell Gene Transcription by RNA Fluorescent In Situ Hybridization (FISH)

    DEFF Research Database (Denmark)

    Ronander, Elena; Bengtsson, Dominique C; Joergensen, Louise

    2012-01-01

    fluorescent in situ hybridization (FISH) analysis of var gene transcription by the parasite in individual nuclei of P. falciparum IE(1). Here, we present a detailed protocol for carrying out the RNA-FISH methodology for analysis of var gene transcription in single-nuclei of P. falciparum infected human...

  1. Non-destructive analysis of small irregularly shaped homogenous samples by X-ray fluorescence spectrometry

    NARCIS (Netherlands)

    Bos, M.; Vrielink, J.A.M.; van der Linden, W.E.

    2000-01-01

    A new calibration procedure is proposed for the non-destructive analysis of small sized samples of irregular shape by X-ray fluorescence spectrometry. The calibration is performed using normal calibration standards and measurements. The calculations for the calibration and the analysis of unknown

  2. The application of two-dimensional fluorescence correlation spectroscopy on the interaction between bovine serum albumin and prulifloxacin

    OpenAIRE

    Xue, Mao-Yun; Yang, Ai-Ping; Ma, Mei-Hua; Li, Xiao-Hua

    2009-01-01

    The interaction between bovine serum albumin (BSA) and prulifloxacin was investigated by ultraviolet spectrophotometer (UV) and fluorescence spectroscopy in this paper. Two-dimensional (2D) correlation spectroscopy was applied to the analysis of fluorescence spectra. The results of spectroscopic measurements suggested that prulifloxacin (PL) have a strong ability to quench the intrinsic fluorescence of bovine serum albumin through static quenching procedure. Thermodynamic parameter enthalpy c...

  3. Abstracts of the 8th Conference on total reflection x-ray fluorescence analysis and related methods

    International Nuclear Information System (INIS)

    Wobrauschek, P.

    2000-01-01

    The 8. conference on total reflection x-ray fluorescence analysis and related methods held from 25.9 to 29.9.2000 contains 79 abstracts about x-ray fluorescence analysis (XRFA) as a powerful tool used for industrial production, geological prospecting and for environmental control. Total reflection x-ray fluorescence spectroscopy is also a tool used for chemical analysis in medicine, industry and research. (E.B.)

  4. Facilitating in vivo tumor localization by principal component analysis based on dynamic fluorescence molecular imaging

    Science.gov (United States)

    Gao, Yang; Chen, Maomao; Wu, Junyu; Zhou, Yuan; Cai, Chuangjian; Wang, Daliang; Luo, Jianwen

    2017-09-01

    Fluorescence molecular imaging has been used to target tumors in mice with xenograft tumors. However, tumor imaging is largely distorted by the aggregation of fluorescent probes in the liver. A principal component analysis (PCA)-based strategy was applied on the in vivo dynamic fluorescence imaging results of three mice with xenograft tumors to facilitate tumor imaging, with the help of a tumor-specific fluorescent probe. Tumor-relevant features were extracted from the original images by PCA and represented by the principal component (PC) maps. The second principal component (PC2) map represented the tumor-related features, and the first principal component (PC1) map retained the original pharmacokinetic profiles, especially of the liver. The distribution patterns of the PC2 map of the tumor-bearing mice were in good agreement with the actual tumor location. The tumor-to-liver ratio and contrast-to-noise ratio were significantly higher on the PC2 map than on the original images, thus distinguishing the tumor from its nearby fluorescence noise of liver. The results suggest that the PC2 map could serve as a bioimaging marker to facilitate in vivo tumor localization, and dynamic fluorescence molecular imaging with PCA could be a valuable tool for future studies of in vivo tumor metabolism and progression.

  5. Discrimination of trace nitroaromatics using linear discriminant analysis on aerosol jet printed fluorescent sensor arrays

    Science.gov (United States)

    Bolse, N.; Eckstein, R.; Schend, M.; Habermehl, A.; Hernandez-Sosa, G.; Eschenbaum, C.; Lemmer, U.

    2017-05-01

    In this work, we report on fluorescent sensor arrays fabricated by aerosol jet printing on glass substrates to detect explosives-related nitroaromatic species. The printed sensor arrays consist of six different fluorescent polymers responding to nitroaromatic vapors through a photo-induced electron transfer. This results in a quenched fluorescence proportional to the vapor concentration. Distinct fluorescence quenching patterns are detected for nitroaromatic species including nitrobenzene, 1,3-dinitrobenzene and 2,4-dinitrotoluene. The detected fingerprints are evaluated at low concentrations of only 1, 3 and 10 parts-per-billion in air. Linear discriminant analysis is used to train each sensor array enabling the discrimination of the target analyte vapors. To investigate the reproducibility of multiple sensor arrays on a single substrate, the measured fluorescence quenching patterns are used to benchmark the linear discriminant models. For this purpose, the target analytes and vapor concentrations are predicted for each sensor array. On average, we report low and reproducible misclassification rates of about 4 % indicating excellent discriminatory abilities at low concentrations close to the detection limits. We conclude that digital printing of fluorescent polymers offers the potential to realize low-cost sensor arrays for a reliable detection of trace explosives.

  6. Automating X-ray Fluorescence Analysis for Rapid Astrobiology Surveys.

    Science.gov (United States)

    Thompson, David R; Flannery, David T; Lanka, Ravi; Allwood, Abigail C; Bue, Brian D; Clark, Benton C; Elam, W Timothy; Estlin, Tara A; Hodyss, Robert P; Hurowitz, Joel A; Liu, Yang; Wade, Lawrence A

    2015-11-01

    A new generation of planetary rover instruments, such as PIXL (Planetary Instrument for X-ray Lithochemistry) and SHERLOC (Scanning Habitable Environments with Raman Luminescence for Organics and Chemicals) selected for the Mars 2020 mission rover payload, aim to map mineralogical and elemental composition in situ at microscopic scales. These instruments will produce large spectral cubes with thousands of channels acquired over thousands of spatial locations, a large potential science yield limited mainly by the time required to acquire a measurement after placement. A secondary bottleneck also faces mission planners after downlink; analysts must interpret the complex data products quickly to inform tactical planning for the next command cycle. This study demonstrates operational approaches to overcome these bottlenecks by specialized early-stage science data processing. Onboard, simple real-time systems can perform a basic compositional assessment, recognizing specific features of interest and optimizing sensor integration time to characterize anomalies. On the ground, statistically motivated visualization can make raw uncalibrated data products more interpretable for tactical decision making. Techniques such as manifold dimensionality reduction can help operators comprehend large databases at a glance, identifying trends and anomalies in data. These onboard and ground-side analyses can complement a quantitative interpretation. We evaluate system performance for the case study of PIXL, an X-ray fluorescence spectrometer. Experiments on three representative samples demonstrate improved methods for onboard and ground-side automation and illustrate new astrobiological science capabilities unavailable in previous planetary instruments. Dimensionality reduction-Planetary science-Visualization.

  7. Analysis of root surface properties by fluorescence/Raman intensity ratio.

    Science.gov (United States)

    Nakamura, Shino; Ando, Masahiro; Hamaguchi, Hiro-O; Yamamoto, Matsuo

    2017-11-01

    The aim of this study is to evaluate the existence of residual calculus on root surfaces by determining the fluorescence/Raman intensity ratio. Thirty-two extracted human teeth, partially covered with calculus on the root surface, were evaluated by using a portable Raman spectrophotometer, and a 785-nm, 100-mW laser was applied for fluorescence/Raman excitation. The collected spectra were normalized to the hydroxyapatite Raman band intensity at 960 cm -1 . Raman spectra were recorded from the same point after changing the focal distance of the laser and the target radiating angle. In seven teeth, the condition of calculus, cementum, and dentin were evaluated. In 25 teeth, we determined the fluorescence/Raman intensity ratio following three strokes of debridement. Raman spectra collected from the dentin, cementum, and calculus were different. After normalization, spectra values were constant. The fluorescence/Raman intensity ratio of calculus region showed significant differences compared to the cementum and dentin (p < 0.05). The fluorescence/Raman intensity ratio decreased with calculus debridement. For this analysis, the delta value was defined as the difference between the values before and after three strokes, with the final 2 delta values close to zero, indicating a gradual asymptotic curve and the change in intensity ratio approximating that of individual constants. Fluorescence/Raman intensity ratio was effectively used to cancel the angle- and distance-dependent fluctuations of fluorescence collection efficiency during measurement. Changes in the fluorescence/Raman intensity ratio near zero suggested that cementum or dentin was exposed, and calculus removed.

  8. Computer-assisted sperm morphometry fluorescence-based analysis has potential to determine progeny sex

    Directory of Open Access Journals (Sweden)

    Pilar Santolaria

    2016-01-01

    Full Text Available This study was designed to determine the ability of computer-assisted sperm morphometry analysis (CASA-Morph with fluorescence to discriminate between spermatozoa carrying different sex chromosomes from the nuclear morphometrics generated and different statistical procedures in the bovine species. The study was divided into two experiments. The first was to study the morphometric differences between X- and Y-chromosome-bearing spermatozoa (SX and SY, respectively. Spermatozoa from eight bulls were processed to assess simultaneously the sex chromosome by FISH and sperm morphometry by fluorescence-based CASA-Morph. SX cells were larger than SY cells on average (P < 0.001 although with important differences between bulls. A simultaneous evaluation of all the measured features by discriminant analysis revealed that nuclear area and average fluorescence intensity were the variables selected by stepwise discriminant function analysis as the best discriminators between SX and SY. In the second experiment, the sperm nuclear morphometric results from CASA-Morph in nonsexed (mixed SX and SY and sexed (SX semen samples from four bulls were compared. FISH allowed a successful classification of spermatozoa according to their sex chromosome content. X-sexed spermatozoa displayed a larger size and fluorescence intensity than nonsexed spermatozoa (P < 0.05. We conclude that the CASA-Morph fluorescence-based method has the potential to find differences between X- and Y-chromosome-bearing spermatozoa in bovine species although more studies are needed to increase the precision of sex determination by this technique.

  9. Genome-wide functional analysis on the molecular mechanism of specifically biosynthesized fluorescence Eu complex.

    Science.gov (United States)

    Ye, Jing; Dong, Xiawei; Jiang, Xuerui; Jiang, Hui; Li, Chen-Zhong; Wang, Xuemei

    2017-09-22

    Fluorescence imaging as an attractive diagnostic technique is widely employed for early diagnosis of cancer. Self-biosynthesized fluorescent Eu complex in situ in Hela cells have realized specifically and accurately fluorescence imaging for cancer cells. But the molecular mechanism of the in situ biosynthesized process is still unclear. In order to reveal this mechanism, we have investigated whole-genome expression profiles with cDNA microarray, incubated with Eu solution in Hela cells for 24 h. Methylthiazoltetrazolium (MTT) assay and laser confocal fluorescence microscopy study showed the low cytotoxicity and specifically fluorescence imaging of Eu complex in Hela cells. It is observed that 563 up-regulated genes and 274 down-regulated genes were differentially expressed. Meanwhile, quantitative RT-PCR was utilized to measure the expression of some important genes, which validated the results of microarray data analysis. Besides, GO analysis showed that a wide range of differential expression functional genes involved in three groups, including cellular component, molecular function and cellular biological process. It was evident that some important biological pathways were apparently affected through KEGG pathway analysis, including focal adhesion pathway and PI3K (phosphatidylinositol 3' -kinase)-Akt signaling pathway, which can influence glycolytic metabolism and NAD(P)H-oxidases metabolic pathway.

  10. New approach to breast tumor detection based on fluorescence x-ray analysis

    Directory of Open Access Journals (Sweden)

    Okuyama, Fumio

    2010-01-01

    Full Text Available A new technical approach to breast-tumor detection is proposed. The technique is based on fluorescence x-ray analysis, and can identify a miniature malignant tumor within the breast. The primary beam intensity needed in fluorescence x-ray analysis is on a lower order of magnitude than that used in mammography. Thus, the newly-proposed technique would enable detection of a still tiny breast cancer while dramatically lowering the radiation dose. Field-emission x-ray sources might be a key for translating this concept into a medical technique.

  11. Two-laser induced selective infrared-visible fluorescence for thin film analysis

    International Nuclear Information System (INIS)

    Richardson, J.H.; Dering, J.P.; Johnson, D.C.; Hrubesh, L.W.

    1980-01-01

    A laser technique has been developed to enhance its sensitivity for thin film analysis of mixtures. A c-w visible or uv laser was used to stimulate visible fluorescence from a thin fluorophor film, and a chopped low-power infrared laser was used to selectively excite characteristic infrared absorption bands in the sample. The resulting modulated visible fluorescence signal was monitored by an optical detection system. The technqiue has been applied to the quantitative determination of mixtures of coumarin 7, rubene, and rhodamine 6G; however, quantitative analysis has been impossible due to the difficulty in obtaining a uniform thin film

  12. X-ray fluorescence analysis and optical emission spectrometry of an roman mirror from Tomis, Romania

    International Nuclear Information System (INIS)

    Belc, M.; Bogoi, M.; Ionescu, D.; Guita, D.; Caiteanu, S.; Caiteanu, D.

    2000-01-01

    The miscellaneous population of Roman Empire, their diverse cultural tradition, their ability to assimilate the roman civilization spirits, had determined a permanent reassessment superimposed upon the roman contribution. Analysis was undertaken using optical emission spectrometry and non-destructive X-ray fluorescence. X-ray fluorescence analysis is a well-established method and is often used in archaeometry and other work dealing with valuable objects pertaining to the history of art and civilization. Roman mirror analysed has been found not to be made of speculum (a high tin bronze). (authors)

  13. Investigating Functional Extension of Optical Coherence Tomography for Spectroscopic Analysis of Blood Oxygen Saturation

    Science.gov (United States)

    Chen, Siyu

    Over the past two decades, optical coherence tomography (OCT) has been successfully applied to various fields of biomedical researching and clinical studies, including cardiology, urology, dermatology, dentistry, oncology, and most successfully, ophthalmology. This dissertation seeks to extend the current OCT practice, which is still largely morphology-based, into a new dimension, functional analysis of metabolic activities in vivo. More specifically, the investigation is focused on retrieving blood oxygen saturation (sO2) using intrinsic hemoglobin optical absorption contrast. Most mammalian cells rely on aerobic respiration to support cellular function, which means they consume oxygen to create adenosine triphosphate (ATP). Metabolic rate of oxygen (MRO2), a key hemodynamic parameter, characterizes how much oxygen is consumed during a given period of time, reflecting the metabolic activity of the target tissue. For example, retinal neurons are highly active and almost entirely rely on the moment-to-moment oxygen supply from retinal circulations. Thus, variation in MRO2 reveals the instantaneous activity of these neurons, shedding light on the physiological and pathophysiological change of cellular functions. Eventually, measuring MRO2 can potentially provide a biomarker for early-stage disease diagnosis, and serve as one benchmark for evaluating effectiveness of medical intervention during disease management. Essential in calculating MRO2, blood sO2 measurements using spectroscopic OCT analysis has been attempted as early as 2003. OCT is intrinsically sensitive to the blood optical absorption spectrum due to its wide-band illumination and detection scheme relying on back-scattered photon. However, accurate retrieval of blood sO2 using conventional near infrared (NIR) OCT systems in vivo has remained challenging. It was not until the development of OCT systems using visible light illumination (vis-OCT) when accurate measurement of blood sO2 was reported in live

  14. Electron optical analysis of a retarding Wien filter for electron spectroscopic imaging

    Science.gov (United States)

    Tsuno, K.

    1993-03-01

    A new Wien filter has been designed for electron spectroscopic imaging. The shape of the electrodes and the magnetic pole pieces of the filter has fourfold symmetry and therefore the Wien condition giving a straight optical axis is satisfied even in the fringing field region. The second-order aberration coefficients of the filter are formulated in a simple form. The filter is applied to a spectroscopic low-energy reflection electron microscope in a retarding condition. The optics of the image-forming lens system is analyzed using the transfer matrix method. The achromatic focus is achieved when the distances of the objective plane and the imaginary image plane to the filter are equal. A condition for obtaining the image free from second-order aberrations is found. The total magnification of the instrument is 3000-14000 times; energy resolution of 2 eV is attained for an initial beam divergence angle of 10 mrad.

  15. Spectroscopic analysis of pharmaceutical formulations through the use of chemometric tools

    Science.gov (United States)

    Ornelas-Soto, N.; Barbosa-García, O.; Meneses-Nava, M.; Ramos-Ortíz, G.; Pichardo-Molina, J.; Maldonado, J. L.; Contreras, U.; López-Martínez, L.; López-de-Alba, P.; López-Barajas, F.

    2009-09-01

    In this work, fast and reliable spectroscopic methods in combination with chemometric tools were developed for simultaneous determination of Acetylsalicylic Acid, Acetaminophen and Caffeine in commercial formulations. For the first-order multivariate calibration method (PLS-1), calibration and validation sets were constructed with 23 and 10 samples respectively according to a central composite design. The Micro-Raman, FTIR-HATR and UV absorption spectra in the region of 100-2000 cm-1, 400-4400 cm-1 and 200-350 nm, respectively, were recorded. The % REP's (Percentage of relative error of prediction) was less than 18 for all used spectroscopic techniques. Subsequently, commercial pharmaceutical samples were analyzed with percentage of recovery between 90 and 117% for the three compounds.

  16. Simulation and analysis of spectroscopic filter of rotational Raman lidar for absolute measurement of atmospheric temperature

    Science.gov (United States)

    Li, Qimeng; Li, Shichun; Hu, Xianglong; Zhao, Jing; Xin, Wenhui; Song, Yuehui; Hua, Dengxin

    2018-01-01

    The absolute measurement technique for atmospheric temperature can avoid the calibration process and improve the measurement accuracy. To achieve the rotational Raman temperature lidar of absolute measurement, the two-stage parallel multi-channel spectroscopic filter combined a first-order blazed grating with a fiber Bragg grating is designed and its performance is tested. The parameters and the optical path structure of the core cascaded-device (micron-level fiber array) are optimized, the optical path of the primary spectroscope is simulated and the maximum centrifugal distortion of the rotational Raman spectrum is approximately 0.0031 nm, the centrifugal ratio of 0.69%. The experimental results show that the channel coefficients of the primary spectroscope are 0.67, 0.91, 0.67, 0.75, 0.82, 0.63, 0.87, 0.97, 0.89, 0.87 and 1 by using the twelfth channel as a reference and the average FWHM is about 0.44 nm. The maximum deviation between the experimental wavelength and the theoretical value is approximately 0.0398 nm, with the deviation degree of 8.86%. The effective suppression to elastic scattering signal are 30.6, 35.2, 37.1, 38.4, 36.8, 38.2, 41.0, 44.3, 44.0, 46.7 dB. That means, combined with the second spectroscope, the suppression at least is up to 65 dB. Therefore we can fine extract single rotational Raman line to achieve the absolute measurement technique.

  17. A BIOSENSOR USING COUPLED PLASMON WAVEGUIDE RESONANCE COMBINED WITH HYPERSPECTRAL FLUORESCENCE ANALYSIS

    Directory of Open Access Journals (Sweden)

    CHAN DU

    2014-01-01

    Full Text Available We developed a biosensor that is capable for simultaneous surface plasmon resonance (SPR sensing and hyperspectral fluorescence analysis in this paper. A symmetrical metal-dielectric slab scheme is employed for the excitation of coupled plasmon waveguide resonance (CPWR in the present work. Resonance between surface plasmon mode and the guided waveguide mode generates narrower full width half-maximum of the reflective curves which leads to increased precision for the determination of refractive index over conventional SPR sensors. In addition, CPWR also offers longer surface propagation depths and higher surface electric field strengths that enable the excitation of fluorescence with hyperspectral technique to maintain an appreciable signal-to-noise ratio. The refractive index information obtained from SPR sensing and the chemical properties obtained through hyperspectral fluorescence analysis confirm each other to exclude false-positive or false-negative cases. The sensor provides a comprehensive understanding of the biological events on the sensor chips.

  18. Considerations on the ideal sample shape for Total Reflection X-ray Fluorescence Analysis

    Energy Technology Data Exchange (ETDEWEB)

    Horntrich, C., E-mail: chorn@ati.ac.at; Kregsamer, P.; Wobrauschek, P.; Streli, C.

    2011-11-15

    Total Reflection X-ray Fluorescence analysis (TXRF) is widely used in semiconductor industry for the analysis of silicon wafer surfaces. Typically an external standard is used for the calibration of the spectrometer. This is sensitive to errors in quantification. For small sample amounts the thin film approximation is valid, absorption effects of the exciting and the detected radiation are neglected and the relation between sample amount and fluorescence intensity is linear. For higher total sample amounts deviations from linearity have been observed (saturation effect). These deviations are one of the difficulties for external standard quantification. A theoretical determination of the ideal TXRF sample shape is content of the presented work with the aim to improve the calibration process and therefore the quantification. The fluorescence intensity emitted by different theoretical sample shapes was calculated, whereby several parameters have been varied (excitation energy, density, diameter/height ratio of the sample). It was investigated which sample shape leads to the highest fluorescence intensity and exhibits the lowest saturation effect. The comparison of the different sample shapes showed that the ring shape matches the ideal TXRF sample shape best. - Highlights: Black-Right-Pointing-Pointer In this work the ideal TXRF sample shape is theoretically determined. Black-Right-Pointing-Pointer Different theoretical sample shapes were investigated. Black-Right-Pointing-Pointer The ring shape matches the ideal TXRF sample shape best. Black-Right-Pointing-Pointer It leads to the highest fluorescence intensity and the lowest saturation effect.

  19. X-ray fluorescence analysis of metal concentration in an alloy electroplating bath

    International Nuclear Information System (INIS)

    Hines, R.A.

    1980-06-01

    An energy-dispersive x-ray fluorescence analysis system has been developed for rapid, simultaneous analysis of gold and copper concentrations in an aqueous electroplating bath. The speed and repeatability of the system make it well suited for in-process control. Data collection and reduction are automatic. The analysis requires less than 10 minutes from taking the sample to printing the gold and copper concentrations

  20. X-ray fluorescence analysis study. Final report, December 1, 1970-December 31, 1977

    Energy Technology Data Exchange (ETDEWEB)

    Kneip, T J; Laurer, G R

    1978-01-01

    This report has described the most significant experiments and the results obtained, during the development of a system for the detection and measurement of Pb in blood using radioisotope-excited x-ray fluorescence analysis, over the contract period. Briefly, the report described: detector selection; source selection; source-sample-detector geometry; sample preparation; system calibration; and separation technique. (PSB)

  1. Elemental analysis of various biomass solid fractions in biorefineries by X-ray fluorescence spectrometry

    DEFF Research Database (Denmark)

    Le, Duy Michael; Sorensen, Hanne R.; Meyer, Anne S.

    2017-01-01

    Elemental analysis by X-ray fluorescence spectrometry (XRF) of solid samples from a biorefinery process was performed to study the behaviour of mineral elements in a process involving hydrothermal pretreatment of biomass (wheat straw, corn stover, sugarcane bagasse, palm oil empty fruit bunches...

  2. X-ray fluorescence analysis of ancient and medieval brass artifacts from south Moravia

    Czech Academy of Sciences Publication Activity Database

    Hložek, M.; Komoróczy, Balázs; Trojek, T.

    2012-01-01

    Roč. 7, č. 70 (2012), s. 1250-1253 ISSN 0969-8043 Institutional research plan: CEZ:AV0Z80010507 Institutional support: RVO:68081758 Keywords : x-ray fluorescence analysis * brass * Moravia Subject RIV: AC - Archeology, Anthropology, Ethnology Impact factor: 1.179, year: 2012

  3. Chemical analysis by X-ray fluorescence, of niobium in high-strength plate steels

    International Nuclear Information System (INIS)

    Iozzi, F.B.; Dias, M.J.P.

    1981-01-01

    The use of X-ray fluorescence spectrometry in quantitative analysis of niobium in steels, as an alternative solution for optical emission spectrometry, in the rapid chemical control of steel fabrication by LD type converters, is presented. (M.C.K.) [pt

  4. Site-Specific Analysis of Protein Hydration Based on Unnatural Amino Acid Fluorescence

    Czech Academy of Sciences Publication Activity Database

    Amaro, Mariana; Brezovský, J.; Kováčová, S.; Sýkora, Jan; Bednář, D.; Němec, V.; Lišková, V.; Kurumbang, N. P.; Beerens, K.; Chaloupková, R.; Paruch, K.; Hof, Martin; Damborský, J.

    2015-01-01

    Roč. 137, č. 15 (2015), s. 4988-4992 ISSN 0002-7863 R&D Projects: GA ČR GBP208/12/G016 Institutional support: RVO:61388955 Keywords : analysis * fluorescence * hydration of proteins Subject RIV: CF - Physical ; Theoretical Chemistry Impact factor: 13.038, year: 2015

  5. A spectroscopic analysis of thermal stability of the Chromobacterium viscosum lipase.

    Science.gov (United States)

    Melo, E P; Taipa, M A; Castellar, M R; Costa, S M; Cabral, J M

    2000-10-30

    The thermal stability of the lipase from Chromobacterium viscosum was assessed by deactivation (loss of activity), fluorescence, circular dichroism (CD) and static light scattering (SLS) measurements. Lipase fluorescence emission is dominated by the tryptophyl contribution. An increase in the tyrosyl contribution from 2 to 16% was only observed upon prolonged incubation at 60 degrees C. The effect of temperature on the tryptophyl quantum yield was studied and two activation energies were calculated. Tryptophan residues in the native structure have an activation energy of 1.9 kcal mol(-1) for temperature-dependent non-radiative deactivation of the excited state. A structural change occurs at approximately 66.7 degrees C and the activation energy increases to 10.2 kcal mol(-1). This structural change is not characterized by tryptophan exposure on the surface of the protein. The deactivation and the evolution of structural changes with time after lipase incubation at 60 degrees C were assessed by fluorescence, CD and SLS measurements. CD spectra show that both secondary and tertiary structures remain native-like after incubation at 60 degrees C in spite of the fluorescence changes observed (red-shift from 330 to 336 nm on the trytophyl emission). SLS measurements together with the CD data show that deactivation may be due to protein association between native molecules. Deactivation and the decrease on the fraction of non-associated native lipase evaluated by changes in fluorescence intensity with time, show apparent first order kinetics. According to the rate constants, fluorescence changes precede deactivation pointing to an underestimation of the deactivation. Reactivation upon dilution during the activity assay and substrate-induced reactivation due to lipase interfacial adsorption are possible causes for this underestimation.

  6. Synthesis, structural analysis, Hirshfeld surface, spectroscopic characterization and, in vitro, antioxidant activity of a novel organic cyclohexaphosphate

    Science.gov (United States)

    Fezai, Ramzi; Mezni, Ali; Rzaigui, Mohamed

    2018-02-01

    The new hybrid [4-Cl-2-(CH3)C6H3NH3]6P6O18·2H2O was synthesized under normal conditions of temperature and pressure. Single crystal X-ray diffraction study was used to identify its structure. It revealed that this organic cyclohexaphosphate crystallized in the P 1 bar triclinic space group with a = 10.41 (10) Å b = 10.94 (7) Å, c = 15.45 (10) Å, α = 77.37 (8), β = 89.75 (8)°, γ = 61.69 (7)°, V = 1501 (2) Å3 and Z = 1. In the crystal framework, the assembling of the three dimensional (3D) structure is formed by intermolecular hydrogen bonds and Van Der Waals interactions. A spectroscopic characterization was carried out to elucidate the structure (UV-Vis, FTIR, 31P MAS-NMR and fluorescent properties). The thermal stability was studied by TG-DTA diagrams under argon atmosphere. Furthermore, 3-D Hirshfeld surfaces in combination with 2-D fingerprint plots were carried out. This compound was also evaluated for its antioxidant activity; four tests were done, in vitro, 1,1-diphenyl-2-picrylhydrazyl (DPPH•), hydroxyl scavenging ability (OH•), ferric reducing power (FRP) and ferrous ion chelating (FIC) ability, using ascorbic acid as a control.

  7. Spectroscopic analysis of the interaction of valproic acid with histone H1 in solution and in chromatin structure.

    Science.gov (United States)

    Sargolzaei, Javad; Rabbani-Chadegani, Azra; Mollaei, Hossein; Deezagi, Abdolkhalegh

    2017-06-01

    Histone H1 is a basic chromosomal protein which links adjacent nucleosomes in chromatin structure. Valproic acid (VPA), a histone deacetylase inhibitor, is widely used as an antiepileptic drug for the treatment of various cancers. In this study the interaction between VPA and histone H1, chromatin and DNA in solution was investigated employing spectroscopic techniques. The results showed that VPA binds cooperatively to histone H1 and chromatin but exhibited very weak interaction with DNA. The association constants demonstrated higher affinity of VPA to H1 compared to chromatin. Fluorescence emission intensity was reduced by quenching value (Ksv) of 2.3 and 0.83 for H1 and chromatin respectively. VPA also altered ellipticity of chromatin and H1 at 220nm indicating increase in α-helix content of H1/chromatin proteins suggesting that the protein moiety of chromatin is the site of VPA action. Moreover, thermal denaturation revealed hypochromicity in chromatin Tm profiles with small shift in Tm values without any significant change in DNA pattern. It is concluded that VPA, apart from histone deacetylase inhibition activity, binds strongly to histone H1 in chromatin structure, demonstrating that VPA may also exert its anticancer activity by influencing chromatin proteins which opens new insight into the mechanism of VPA action. Copyright © 2017 Elsevier B.V. All rights reserved.

  8. Comparative analysis of direct fluorescence, Zenon labeling, and quantum dot nanocrystal technology in immunofluorescence staining.

    Science.gov (United States)

    Tang, Xiaoling; He, Ju; Partin, James; Vafai, Abbas

    2010-01-01

    A comparative analysis was performed to determine the sensitivity and efficiency of three fluorescent labeling techniques, including direct fluorescent-antibody staining (FA), Zenon labeling, and quantum dot (QD) nanocrystal technology. Two varicella-zoster virus immunoglobin (Ig) G forms, mAb 4F9 and mAb g62, were selected for these studies. The results indicated that: (1) All three methods demonstrated similar brightness and photostability; (2) the time required to conjugate the antibody varied, with Zenon labeling being the quickest; and (3) the stability of each conjugated complex was different, with FITC/rhodamine-conjugated antibody being the most stable.

  9. Tools for the quantitative analysis of sedimentation boundaries detected by fluorescence optical analytical ultracentrifugation.

    Directory of Open Access Journals (Sweden)

    Huaying Zhao

    Full Text Available Fluorescence optical detection in sedimentation velocity analytical ultracentrifugation allows the study of macromolecules at nanomolar concentrations and below. This has significant promise, for example, for the study of systems of high-affinity protein interactions. Here we describe adaptations of the direct boundary modeling analysis approach implemented in the software SEDFIT that were developed to accommodate unique characteristics of the confocal fluorescence detection system. These include spatial gradients of signal intensity due to scanner movements out of the plane of rotation, temporal intensity drifts due to instability of the laser and fluorophores, and masking of the finite excitation and detection cone by the sample holder. In an extensive series of experiments with enhanced green fluorescent protein ranging from low nanomolar to low micromolar concentrations, we show that the experimental data provide sufficient information to determine the parameters required for first-order approximation of the impact of these effects on the recorded data. Systematic deviations of fluorescence optical sedimentation velocity data analyzed using conventional sedimentation models developed for absorbance and interference optics are largely removed after these adaptations, resulting in excellent fits that highlight the high precision of fluorescence sedimentation velocity data, thus allowing a more detailed quantitative interpretation of the signal boundaries that is otherwise not possible for this system.

  10. Intrinsic fluorescence spectroscopy of glutamate dehydrogenase: Integrated behavior and deconvolution analysis

    Science.gov (United States)

    Pompa, P. P.; Cingolani, R.; Rinaldi, R.

    2003-07-01

    In this paper, we present a deconvolution method aimed at spectrally resolving the broad fluorescence spectra of proteins, namely, of the enzyme bovine liver glutamate dehydrogenase (GDH). The analytical procedure is based on the deconvolution of the emission spectra into three distinct Gaussian fluorescing bands Gj. The relative changes of the Gj parameters are directly related to the conformational changes of the enzyme, and provide interesting information about the fluorescence dynamics of the individual emitting contributions. Our deconvolution method results in an excellent fitting of all the spectra obtained with GDH in a number of experimental conditions (various conformational states of the protein) and describes very well the dynamics of a variety of phenomena, such as the dependence of hexamers association on protein concentration, the dynamics of thermal denaturation, and the interaction process between the enzyme and external quenchers. The investigation was carried out by means of different optical experiments, i.e., native enzyme fluorescence, thermal-induced unfolding, and fluorescence quenching studies, utilizing both the analysis of the “average” behavior of the enzyme and the proposed deconvolution approach.

  11. A simple and compact fluorescence detection system for capillary electrophoresis and its application to food analysis.

    Science.gov (United States)

    Zhai, Haiyun; Yuan, Kaisong; Yu, Xiao; Chen, Zuanguang; Liu, Zhenping; Su, Zihao

    2015-10-01

    A novel fluorescence detection system for CE was described and evaluated. Two miniature laser pointers were used as the excitation source. A Y-style optical fiber was used to transmit the excitation light and a four-branch optical fiber was used to collect the fluorescence. The optical fiber and optical filter were imported into a photomultiplier tube without any extra fixing device. A simplified PDMS detection cell was designed with guide channels through which the optical fibers were easily aligned to the detection window of separation capillary. According to different requirements, laser pointers and different filters were selected by simple switching and replacement. The fluorescence from four different directions was collected at the same detecting point. Thus, the sensitivity was enhanced without peak broadening. The fluorescence detection system was simple, compact, low-cost, and highly sensitive, with its functionality demonstrated by the separation and determination of red dyes and fluorescent whitening agents. The detection limit of rhodamine 6G was 7.7 nM (S/N = 3). The system was further applied to determine illegal food dyes. The CE system is potentially eligible for food safety analysis. © 2015 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

  12. Analysis of archaeological ceramics by total-reflection X-ray fluorescence: Quantitative approaches

    Energy Technology Data Exchange (ETDEWEB)

    Fernandez-Ruiz, R. [Servicio Interdepartamental de Investigacion, Facultad de Ciencias, Universidad Autonoma de Madrid, Modulo C-9, Laboratorio de TXRF, Crta. Colmenar, Km 15, Cantoblanco, E-28049, Madrid (Spain)], E-mail: ramon.fernandez@uam.es; Garcia-Heras, M. [Grupo de Arqueometria de Vidrios y Materiales Ceramicos, Instituto de Historia, Centro de Ciencias Humanas y Sociales, CSIC, C/ Albasanz, 26-28, 28037 Madrid (Spain)

    2008-09-15

    This paper reports the quantitative methodologies developed for the compositional characterization of archaeological ceramics by total-reflection X-ray fluorescence at two levels. A first quantitative level which comprises an acid leaching procedure, and a second selective level, which seeks to increase the number of detectable elements by eliminating the iron present in the acid leaching procedure. Total-reflection X-ray fluorescence spectrometry has been compared, at a quantitative level, with Instrumental Neutron Activation Analysis in order to test its applicability to the study of this kind of materials. The combination of a solid chemical homogenization procedure previously reported with the quantitative methodologies here presented allows the total-reflection X-ray fluorescence to analyze 29 elements with acceptable analytical recoveries and accuracies.

  13. Visualizing the dental biofilm matrix by means of fluorescence lectin-binding analysis

    DEFF Research Database (Denmark)

    Tawakoli, Pune Nina; Neu, Thomas R; Busck, Mette Marie

    2017-01-01

    The extracellular matrix is a poorly studied, yet important component of dental biofilms. Fluorescence lectin-binding analysis (FLBA) is a powerful tool to characterize glycoconjugates in the biofilm matrix. This study aimed to systematically investigate the ability of 75 fluorescently labeled...... of sucrose. For five lectins that proved particularly suitable, stained biovolumes were quantified and correlated to the bacterial composition of the biofilms. Additionally, combinations of up to three differently labeled lectins were tested. Of the 10 lectins, five bound particularly well in 48-h......-biofilms: Aleuria aurantia (AAL), Calystega sepiem (Calsepa), Lycopersicon esculentum (LEA), Morniga-G (MNA-G) and Helix pomatia (HPA). No significant correlation between the binding of specific lectins and bacterial composition was found. Fluorescently labeled lectins enable the visualization of glycoconjugates...

  14. Analysis of eight argonne premium coal samples by X-ray fluorescence spectrometry

    Science.gov (United States)

    Evans, J.R.; Sellers, G.A.; Johnson, R.G.; Vivit, D.V.; Kent, J.

    1990-01-01

    X-ray fluorescence spectrometric methods were used in the analysis of eight Argonne Premium Coal Samples. Trace elements (Cr, Ni, Cu, Zn, Rb, Sr, Y, Zr, Nb, Ba, La, and Ce) in coal ash were determined by energy-dispersive X-ray fluorescence spectrometry; major elements (Na, Mg, Al, Si, P, S, K, Ca, Ti, Mn, and Fe) in coal ash and trace elements (Cl and P) in whole coal were determined by wavelength-dispersive X-ray fluorescence spectrometry. The results of this study will be used in a geochemical database compiled for these materials from various analytical techniques. The experimental XRF methods and procedures used to determine these major and trace elements are described.

  15. Theory of stellar atmospheres an introduction to astrophysical non-equilibrium quantitative spectroscopic analysis

    CERN Document Server

    Hubeny, Ivan

    2015-01-01

    This book provides an in-depth and self-contained treatment of the latest advances achieved in quantitative spectroscopic analyses of the observable outer layers of stars and similar objects. Written by two leading researchers in the field, it presents a comprehensive account of both the physical foundations and numerical methods of such analyses. The book is ideal for astronomers who want to acquire deeper insight into the physical foundations of the theory of stellar atmospheres, or who want to learn about modern computational techniques for treating radiative transfer in non-equilibrium situations. It can also serve as a rigorous yet accessible introduction to the discipline for graduate students.

  16. Purged window apparatus. [On-line spectroscopic analysis of gas flow systems

    Science.gov (United States)

    Ballard, E.O.

    1982-04-05

    A purged window apparatus is described which utilizes tangentially injected heated purge gases in the vicinity of electromagnetic radiation transmitting windows and a tapered external mounting tube to accelerate these gases to provide a vortex flow on the window surface and a turbulent flow throughout the mounting tube thereby preventing backstreaming of flowing gases under investigation in a chamber to which a plurality of similar purged apparatus is attached with the consequent result that spectroscopic analyses can be undertaken for lengthy periods without the necessity of interrupting the flow for cleaning or replacing the windows due to contamination.

  17. On-chip cell analysis platform: Implementation of contact fluorescence microscopy in microfluidic chips

    Directory of Open Access Journals (Sweden)

    Hiroaki Takehara

    2017-09-01

    Full Text Available Although fluorescence microscopy is the gold standard tool for biomedical research and clinical applications, their use beyond well-established laboratory infrastructures remains limited. The present study investigated a novel on-chip cell analysis platform based on contact fluorescence microscopy and microfluidics. Combined use of a contact fluorescence imager based on complementary metal-oxide semiconductor technology and an ultra-thin glass bottom microfluidic chip enabled both to observe living cells with minimal image distortion and to ease controlling and handling of biological samples (e.g. cells and biological molecules in the imaged area. A proof-of-concept experiment of on-chip detection of cellular response to endothelial growth factor demonstrated promising use for the recently developed on-chip cell analysis platform. Contact fluorescence microscopy has numerous desirable features including compatibility with plastic microfluidic chips and compatibility with the electrical control system, and thus will fulfill the requirements of a fully automated cell analysis system.

  18. Monitoring organic loading to swimming pools by fluorescence excitation–emission matrix with parallel factor analysis (PARAFAC)

    DEFF Research Database (Denmark)

    Seredynska-Sobecka, Bozena; Stedmon, Colin; Boe-Hansen, Rasmus

    2011-01-01

    Fluorescence Excitation–Emission Matrix spectroscopy combined with parallel factor analysis was employed to monitor water quality and organic contamination in swimming pools. The fluorescence signal of the swimming pool organic matter was low but increased slightly through the day. The analysis...... revealed that the organic matter fluorescence was characterised by five different components, one of which was unique to swimming pool organic matter and one which was specific to organic contamination. The latter component had emission peaks at 420nm and was found to be a sensitive indicator of organic...... loading in swimming pool water. The fluorescence at 420nm gradually increased during opening hours and represented material accumulating through the day....

  19. Quantitative analysis of fluorescence lifetime measurements of the macula using the fluorescence lifetime imaging ophthalmoscope in healthy subjects.

    Science.gov (United States)

    Dysli, Chantal; Quellec, Gwénolé; Abegg, Mathias; Menke, Marcel N; Wolf-Schnurrbusch, Ute; Kowal, Jens; Blatz, Johannes; La Schiazza, Olivier; Leichtle, Alexander B; Wolf, Sebastian; Zinkernagel, Martin S

    2014-04-03

    Fundus autofluorescence (FAF) cannot only be characterized by the intensity or the emission spectrum, but also by its lifetime. As the lifetime of a fluorescent molecule is sensitive to its local microenvironment, this technique may provide more information than fundus autofluorescence imaging. We report here the characteristics and repeatability of FAF lifetime measurements of the human macula using a new fluorescence lifetime imaging ophthalmoscope (FLIO). A total of 31 healthy phakic subjects were included in this study with an age range from 22 to 61 years. For image acquisition, a fluorescence lifetime ophthalmoscope based on a Heidelberg Engineering Spectralis system was used. Fluorescence lifetime maps of the retina were recorded in a short- (498-560 nm) and a long- (560-720 nm) spectral channel. For quantification of fluorescence lifetimes a standard ETDRS grid was used. Mean fluorescence lifetimes were shortest in the fovea, with 208 picoseconds for the short-spectral channel and 239 picoseconds for the long-spectral channel, respectively. Fluorescence lifetimes increased from the central area to the outer ring of the ETDRS grid. The test-retest reliability of FLIO was very high for all ETDRS areas (Spearman's ρ = 0.80 for the short- and 0.97 for the long-spectral channel, P macula in healthy subjects. By using a custom-built software, we were able to quantify fluorescence lifetimes within the ETDRS grid. Establishing a clinically accessible standard against which to measure FAF lifetimes within the retina is a prerequisite for future studies in retinal disease.

  20. Possible Radiation-Induced Damage to the Molecular Structure of Wooden Artifacts Due to Micro-Computed Tomography, Handheld X-Ray Fluorescence, and X-Ray Photoelectron Spectroscopic Techniques

    Directory of Open Access Journals (Sweden)

    Madalena Kozachuk

    2016-05-01

    Full Text Available This study was undertaken to ascertain whether radiation produced by X-ray photoelectron spectroscopy (XPS, micro-computed tomography (μCT and/or portable handheld X-ray fluorescence (XRF equipment might damage wood artifacts during analysis. Changes at the molecular level were monitored by Fourier transform infrared (FTIR analysis. No significant changes in FTIR spectra were observed as a result of μCT or handheld XRF analysis. No substantial changes in the collected FTIR spectra were observed when XPS analytical times on the order of minutes were used. However, XPS analysis collected over tens of hours did produce significant changes in the FTIR spectra.

  1. Scoria analysis by X-ray fluorescence with briquet

    International Nuclear Information System (INIS)

    Silva, G.R. da; Albert, P.E.

    1987-01-01

    The sample of scoria is triturated, using boric acid as agglomerative. The briquets are analyzed by X-ray quantometry, establishing the proportions of SiO 2 , P 2 O 5 , S, Cr 2 O 3 , V 2 O 5 , TiO 2 , Al 2 O 3 , Mg O, Ca O, FeO and their basicity. The calibration curves are prepared with standard scoria samples, by chemical analysis. (C.G.C.) [pt

  2. Single particle transfer for quantitative analysis with total-reflection X-ray fluorescence spectrometry

    International Nuclear Information System (INIS)

    Esaka, Fumitaka; Esaka, Konomi T.; Magara, Masaaki; Sakurai, Satoshi; Usuda, Shigekazu; Watanabe, Kazuo

    2006-01-01

    The technique of single particle transfer was applied to quantitative analysis with total-reflection X-ray fluorescence (TXRF) spectrometry. The technique was evaluated by performing quantitative analysis of individual Cu particles with diameters between 3.9 and 13.2 μm. The direct quantitative analysis of the Cu particle transferred onto a Si carrier gave a discrepancy between measured and calculated Cu amounts due to the absorption effects of incident and fluorescent X-rays within the particle. By the correction for the absorption effects, the Cu amounts in individual particles could be determined with the deviation within 10.5%. When the Cu particles were dissolved with HNO 3 solution prior to the TXRF analysis, the deviation was improved to be within 3.8%. In this case, no correction for the absorption effects was needed for quantification

  3. Investigation of the interaction between indigotin and two serum albumins by spectroscopic approaches

    Directory of Open Access Journals (Sweden)

    Zheng-Jun Cheng

    2013-08-01

    Full Text Available The binding characteristics of indigotin with human serum albumin (HSA and bovine serum albumin (BSA have been investigated by various spectroscopic techniques. Spectroscopic analysis revealed that the quenching mechanism between indigotin and HSA/BSA belonged to the static quenching. The displacement experiments suggested that indigotin primarily bound to tryptophan residues on proteins within site I. The thermodynamic parameters indicated that the binding of indigotin–HSA/BSA mainly depended on the hydrophobic interaction. The binding distance of indigotin to HSA/BSA was evaluated. The results by synchronous fluorescence, three-dimensional fluorescence, Fourier Transform Infrared spectroscopy (FT-IR and circular dichroism (CD spectra showed that the conformation of proteins altered in the presence of indigotin. Keywords: Human serum albumin, Bovine serum albumin, Indigotin, Fluorescence spectroscopy, Binding constants

  4. Raman spectroscopic analysis of phase-transformation and stress patterns in zirconia hip joints.

    Science.gov (United States)

    Pezzotti, Giuseppe; Porporati, Alessandro A

    2004-01-01

    Confocal Raman piezo-spectroscopy has been used for the quantitative assessments of phase transformation and residual stresses in zirconia made artificial hip joints. This work can be considered to be a first step towards the development of a fully quantitative technique for the spectroscopic characterization of zirconia femoral heads and other zirconia parts for biomedical applications. After establishing reliable calibration procedures, Raman microprobe spectroscopy could be extended to provide quantitative assessments of zirconia metastability and microscopic stress fields along the z axis perpendicular to the joint surface. For the first time, we have directly visualized patterns of phase-transformation and related residual stresses on the very surface and along the subsurface of both in vitro tested and retrieved hip implants. These spectroscopic assessments may open a completely new perspective in understanding the micromechanical wear behavior of zirconia ceramics in biological environment and in developing new zirconia-based biomaterials with superior stability characteristics. (c) 2004 Society of Photo-Optical Instrumentation Engineers.

  5. Analysis of noble metal on automotive exhaust catalysts by radioisotope-induce x-ray fluorescence

    International Nuclear Information System (INIS)

    Elgart, M.F.

    1976-01-01

    A technique was developed for the in-situ analysis of noble metals deposited on monolithic automotive exhaust catalysts. This technique is based on radioisotope-induced x-ray fluorescence, and provides a detailed picture of the distribution of palladium and platinum on catalyst samples. The experimental results for the cross section of a monolithic exhaust catalyst, analyzed in increments of 0.2 cm 3 , are compared with analyses for palladium and platinum obtained by instrumental neutron activation analysis

  6. Multielemental analysis of surface sediments in Havana bay (Cuba) using X-ray fluorescence

    International Nuclear Information System (INIS)

    Gelen, A.; Corrales, Y.; Lopez, N.; Manso Guevara, M. V.; Casanova, A. O.; Alessandro, K. D'; Diaz, O.; Espen, P. Van; Beltran, J.; Soto, J.

    2006-01-01

    Multielemental Analysis was performed in Superficial Sediments in Havana Bay. Twenty one samples were analysed by Dispersive Energy X- Ray Fluorescence using an spectrometer based on Si (Li) semiconductor detector an a 109 Cd source. The results showed a similar behaviour in the levels of contamination related with neutron activation analysis. The data suggest that an anthropogenic input into the bay from domestic sewage and industries occurred. (Full text)

  7. Environmental trace-element analysis using a benchtop total reflection X-ray fluorescence spectrometer.

    Science.gov (United States)

    Stosnach, Hagen

    2005-07-01

    Total reflection X-ray fluorescence (TXRF) analysis is an established technique for trace-element analysis in various types of samples. Though expensive large-scale systems restricted the applications in the past, in this study the capability of a benchtop system for trace elemental analysis is reported. The suitability of this system for the mobile on-site analysis of heavy metal contaminated soils and sediments is reported as well as the possibilities and restrictions of TXRF for additional applications, including trace-element analysis of water, glass and biological samples.

  8. Embryonic lineage analysis using three-dimensional, time-lapse in-vivo fluorescent microscopy

    Science.gov (United States)

    Minden, Jonathan; Kam, Zvi; Agard, David A.; Sedat, John W.; Alberts, Bruce

    1990-08-01

    Drosophila melanogaster has become one of the most extensively studied organisms because of its amenability to genetic analysis. Unfortunately, the biochemistry and cell biology ofDrosophila has lagged behind. To this end we have been microinjecting fluorescently labelled proteins into the living embryo and observing the behavior of these proteins to determine their role in the cell cycle and development. Imaging of these fluorescent probes is an extremely important element to this form of analysis. We have taken advantage of the sensitivity and well behaved characteristics of the charge coupled device (CCD) camera in conjunction with digital image enhancement schemes to produce highly accurate images of these fluorescent probes in vivo. One of our major goals is to produce a detailed map of cell fate so that we can understand how fate is determined and maintained. In order produce such a detailed map, protocols for following the movements and mitotic behavior of a large number of cells in three dimensions over relatively long periods of time were developed. We will present our results using fluorescently labelled histone proteins as a marker for nuclear location1. In addition, we will also present our initial results using a photoactivatable analog of fluorescein to mark single cells so that their long range fate can be unambiguously determined.

  9. Visualization of basal cell carcinoma by fluorescence diagnosis and independent component analysis.

    Science.gov (United States)

    Kopriva, Ivica; Peršin, Antun; Zorc, Hrvoje; Pašić, Aida; Lipozenčić, Jasna; Kostović, Krešimir; Lončarić, Martin

    2007-09-01

    Photodynamic detection (PDD) of skin tumours is based on the visualization of a fluorophores, with the ability to accumulate in tumour tissue, by the use of fluorescence imaging. Of particular importance is the application of δ-5-aminolaevulinic acid (ALA) that, through the process of biosynthesis causes formation of the protoporphyrin IX (PpIX). The PpIX has the ability of selective fluorescence after basal cell carcinoma (BCC) has been treated with ALA. Higher concentration of PpIX in tumour tissue compared to surrounding normal skin is the basis for PDD. Our contribution in this preliminary study is application of the independent component analysis (ICA) to extract the BCC spatial map, by processing fluorescent RGB image acquired under excitation with 405nm light. Comparative performance analysis with other two widely used image processing methods: ratio imaging and optimal threshold based imaging, reveals that ICA produces BCC spatial map that is most consistent in term of diagnostic quality by both visual assessment and calculation of the BCC demarcation line. We believe this represents a solid basis for the design of a compact and low-cost multi-spectral fluorescence imaging system, capable for real time calculation of the skin tumour demarcation.

  10. Synchrotron radiation micro-X-ray fluorescence analysis: A tool to increase accuracy in microscopic analysis

    CERN Document Server

    Adams, F

    2003-01-01

    Microscopic X-ray fluorescence (XRF) analysis has potential for development as a certification method and as a calibration tool for other microanalytical techniques. The interaction of X-rays with matter is well understood and modelling studies show excellent agreement between experimental data and calculations using Monte Carlo simulation. The method can be used for a direct iterative calculation of concentrations using available high accuracy physical constants. Average accuracy is in the range of 3-5% for micron sized objects at concentration levels of less than 1 ppm with focused radiation from SR sources. The end-station ID18F of the ESRF is dedicated to accurate quantitative micro-XRF analysis including fast 2D scanning with collection of full X-ray spectra. Important aspects of the beamline are the precise monitoring of the intensity of the polarized, variable energy beam and the high reproducibility of the set-up measurement geometry, instrumental parameters and long-term stability.

  11. Spectroscopic analysis and molecular docking of imidazole derivatives and investigation of its reactive properties by DFT and molecular dynamics simulations

    Science.gov (United States)

    Thomas, Renjith; Hossain, Mossaraf; Mary, Y. Sheena; Resmi, K. S.; Armaković, Stevan; Armaković, Sanja J.; Nanda, Ashis Kumar; Ranjan, Vivek Kumar; Vijayakumar, G.; Van Alsenoy, C.

    2018-04-01

    Solvent-free synthesis pathway for obtaining two imidazole derivatives (2-chloro-1-(4-methoxyphenyl)-4,5-dimethyl-1H-imidazole (CLMPDI) and 1-(4-bromophenyl)-2-chloro-4,5-dimethyl-1H-imidazole (BPCLDI) has been reported in this work, followed by detailed experimental and computational spectroscopic characterization and reactivity study. Spectroscopic methods encompassed IR, FT-Raman and NMR techniques, with the mutual comparison of experimentally and computationally obtained results at DFT/B3LYP level of theory. Reactivity study based on DFT calculations encompassed molecular orbitals analysis, followed by calculations of molecular electrostatic potential (MEP) and average local ionization energy (ALIE) values, Fukui functions and bond dissociation energies (BDE). Additionally, the stability of title molecules in water has been investigated via molecular dynamics (MD) simulations, while interactivity with aspulvinonedimethylallyl transferase protein has been evaluated by molecular docking procedure. CLMPDI compound showed antimicrobial activity against all four bacterial strain in both gram positive and gram negative bacteria while, BPCLDI showed only in gram positive bacteria, Staphylococcus Aureus (MTCC1144). The first order hyperpolarizability of CLMPDI and BPCLDI are 20.15 and 6.10 times that of the standard NLO material urea.

  12. SPECTROSCOPIC ANALYSIS OF FIVE PHYLOGENETICALLY DISTANT FUNGI (DIVISION: ASCOMYCETE FROM VELLAR ESTUARY, SOUTHEAST COAST OF INDIA – A PILOT STUDY

    Directory of Open Access Journals (Sweden)

    Jayachandran Subburaj

    2013-04-01

    Full Text Available Fungal taxonomy is dynamically driven towards controversial discipline that consequently requires changes in nomenclature. Scarcity of microbiological expertise particularly for marine fungi is another major setback for these taxonomical differences. Here, five different species pharmacologically important marine fungi under Division Ascomycete were studied for their spectral variation. This work verified the practical applicability of FT-IR microspectroscopy technique for early and rapid identification of these species based on the spectral data showed striking difference with their major biomolecules such as lipids, proteins and nucleic acids produced by them. Spectra of all the species showed striking differences while individual peaks of each spectrum are parallel to each other in their respective spectral regions. Aspergillus oryzae have intense peaks in the lipid and nucleic acid spectral region and moderate bands in the amide spectrum. Phoma herbarum and Trichoderma piluliferum showed intense peaks in the protein spectral region but moderate peaks in the lipid and nucleic acid regions. Hypocrea lixii and Meyerozyma guilliermandii have less intense peaks in all the five spectral regions. This unique spectral representation is concordant with the cluster analysis dendrogram by minimum variance statistical method where low spectroscopic distance was found between H. lixii and M. guilliermondii whereas a higher spectroscopic distance was found between P. herbarum and T. piluliferum. FTIR spectroscopy delivers a combined advantage for efficient fungal classification as well as simultaneous visualization of chemical composition of samples as evident from this study.

  13. A novel spectroscopic analysis to detect photochemical reaction of the bronchodilator - Doxofylline and its estimation in pharmaceutical formulation

    Science.gov (United States)

    Sasi Rekha, P.; Gunasekaran, S.

    2018-02-01

    Photostability studies of drugs and drug products are an integral part of the product development process in the pharmaceutical industry. These studies are carried out to ensure quality, efficacy and safety of the formulated products during manufacture, storage and use. In this investigation, a novel spectroscopic approach has been adopted by employing the FTIR-ATR and UV/Visible techniques to detect the photochemical reactions of the drug Doxofylline, chemically designated as 7-(1, 3 dioxolane-2-yl methyl) theophylline, in its raw (pure) form. Significant changes were observed in terms of optical density of the absorption bands and a satisfactory analysis has been performed using ANOVA Statistics. It highlights the role of the photochemistry of drugs with respect to its spectral profiles and also explains photo physical processes. In addition; the drug compatibility study was also undertaken by using FTIR-ATR technique which indicated that there were no interactions occurring between the raw sample of the drug and the excipients used in the preparation of the pharmaceutical formulation. With this, UV-visible spectroscopic method was validated for the quantitative estimation of Doxofylline in pharmaceutical dosage forms and was performed with λmax at 274 nm. Calibration curves were linear between the concentration range 10-50 μg/ml. The various parameters such as linearity, precision, accuracy, recovery and specificity were studied according to ICH guidelines (Ahmed et al., 2016; Jain et al., 2011; ICH, 1996).

  14. Total-reflection X-ray fluorescence analysis of Austrian wine

    Energy Technology Data Exchange (ETDEWEB)

    Gruber, X. [Atominstitut der Osterreichischen Universitaeten, 1020 Vienna (Austria); Kregsamer, P. [Atominstitut der Osterreichischen Universitaeten, 1020 Vienna (Austria); Wobrauschek, P. [Atominstitut der Osterreichischen Universitaeten, 1020 Vienna (Austria); Streli, C. [Atominstitut der Osterreichischen Universitaeten, 1020 Vienna (Austria)]. E-mail: streli@ati.ac.at

    2006-11-15

    The concentration of major, minor and trace elements in Austrian wine was determined by total-reflection X-ray fluorescence using gallium as internal standard. A multi-elemental analysis was possible by pipetting 6 {mu}l of wine directly on the reflector and drying. Total-reflection X-ray fluorescence analysis was performed with Atomika EXTRA II A (Cameca) X-rays from a Mo tube with a high-energy cut-off at 20 keV in total-reflection geometry. The results showed that it was possible to identify only by the elemental analysis as fingerprint the vineyards and year of vintage among 11 different wines.

  15. Total-reflection X-ray fluorescence analysis of Austrian wine

    International Nuclear Information System (INIS)

    Gruber, X.; Kregsamer, P.; Wobrauschek, P.; Streli, C.

    2006-01-01

    The concentration of major, minor and trace elements in Austrian wine was determined by total-reflection X-ray fluorescence using gallium as internal standard. A multi-elemental analysis was possible by pipetting 6 μl of wine directly on the reflector and drying. Total-reflection X-ray fluorescence analysis was performed with Atomika EXTRA II A (Cameca) X-rays from a Mo tube with a high-energy cut-off at 20 keV in total-reflection geometry. The results showed that it was possible to identify only by the elemental analysis as fingerprint the vineyards and year of vintage among 11 different wines

  16. An evaluation of the x-ray-fluorescence analysis of rocks and silicates under routine conditions

    International Nuclear Information System (INIS)

    Stoch, H.

    1975-01-01

    This report correlates the analytical results obtained by four laboratories using X-ray-fluorescence analysis on ten reference silicate samples that were incorporated in the analytical programmes required by the Geological Survey of the Republic of South Africa over a five-year period. The results and their statistical treatment are given, together with a comparison of the results for similar material issued by the Centre de Recherches Petrographiques et Geochimiques and the British Ceramic Research Association using wet-chemical methods. This study shows that the analysis, by X-ray-fluorescence measurement, of rocks and silicate samples for the commonly determined constituents is more precise than analysis by classical wet-chemical procedures [af

  17. Laboratory Research. [spectroscopic analysis, photochemical reactions, and proton irradiation of ice

    Science.gov (United States)

    Donn, B.

    1981-01-01

    To properly interpret the rapidly growing body of data from comet observations, many types of laboratory measurements are needed. These include: (1) molecular spectroscopy in the visible, ultraviolet, infrared and microwave region of the spectra; (2) laser fluorescent spectroscopy of photofragments; (3) laboratory cross-section or reaction rate measurements using flow tube techniques, fluorescent spectroscopy detection for neutrals and ion-molecule reaction techniques; (4) experiments to simulate solar-wind interactions with comets; (5) studies of the properties and behavior of ice mixtures; (6) experiments on the sublimation rate of ice, and the phase transition from amorphous to crystalline ice; (7) investigations of the irradiation of ice; and (8) the electron impact dissociation and excitation of molecules of cometary interest. A nearly completed experiment on the proton irradiation of ice is described.

  18. Quantitative analysis of dynamic association in live biological fluorescent samples.

    Directory of Open Access Journals (Sweden)

    Pekka Ruusuvuori

    Full Text Available Determining vesicle localization and association in live microscopy may be challenging due to non-simultaneous imaging of rapidly moving objects with two excitation channels. Besides errors due to movement of objects, imaging may also introduce shifting between the image channels, and traditional colocalization methods cannot handle such situations. Our approach to quantifying the association between tagged proteins is to use an object-based method where the exact match of object locations is not assumed. Point-pattern matching provides a measure of correspondence between two point-sets under various changes between the sets. Thus, it can be used for robust quantitative analysis of vesicle association between image channels. Results for a large set of synthetic images shows that the novel association method based on point-pattern matching demonstrates robust capability to detect association of closely located vesicles in live cell-microscopy where traditional colocalization methods fail to produce results. In addition, the method outperforms compared Iterated Closest Points registration method. Results for fixed and live experimental data shows the association method to perform comparably to traditional methods in colocalization studies for fixed cells and to perform favorably in association studies for live cells.

  19. Integrating semantic annotation and information visualization for the analysis of multichannel fluorescence micrographs from pancreatic tissue.

    Science.gov (United States)

    Herold, Julia; Zhou, Luxian; Abouna, Sylvie; Pelengaris, Stella; Epstein, David; Khan, Michael; Nattkemper, Tim W

    2010-09-01

    The challenging problem of computational bioimage analysis receives growing attention from life sciences. Fluorescence microscopy is capable of simultaneously visualizing multiple molecules by staining with different fluorescent dyes. In the analysis of the result multichannel images, segmentation of ROIs resembles only a first step which must be followed by a second step towards the analysis of the ROI's signals in the different channels. In this paper we present a system that combines image segmentation and information visualization principles for an integrated analysis of fluorescence micrographs of tissue samples. The analysis aims at the detection and annotation of cells of the Islets of Langerhans and the whole pancreas, which is of great importance in diabetes studies and in the search for new anti-diabetes treatments. The system operates with two modules. The automatic annotation module applies supervised machine learning for cell detection and segmentation. The second information visualization module can be used for an interactive classification and visualization of cell types following the link-and-brush principle for filtering. We can compare the results obtained with our system with results obtained manually by an expert, who evaluated a set of example images three times to account for his intra-observer variance. The comparison shows that using our system the images can be evaluated with high accuracy which allows a considerable speed up of the time-consuming evaluation process.

  20. Studies on the binding of fulvic acid with transferrin by spectroscopic analysis

    Science.gov (United States)

    Zhang, Xiu-feng; Yang, Guang; Dong, Yu; Zhao, Yan-qin; Sun, Xiao-ran; Chen, Lei; Chen, Hong-bo

    2015-02-01

    Transferrin has shown potential in the delivery of anticancer drugs into primarily proliferating cancer cells that over-express transferrin receptors. Fulvic acid has a wide range of biological and pharmacological activities which caused widespread concerns, the interaction of fulvic acid with human serum transferrin (Tf) has great significance for gaining a deeper insight about anticancer activities of fulvic acid. In this study, the mechanism of interaction between fulvic acid and Tf, has been investigated by using fluorescence quenching, thermodynamics, synchronous fluorescence and circular dichroism (CD) under physiological condition. Our results have shown that fulvic acid binds to Tf and form a new complex, and the calculated apparent association constants are 5.04 × 108 M-1, 5.48 × 107 M-1, 7.38 × 106 M-1 from the fluorescence quenching at 288 K, 298 K, and 310 K. The thermodynamic parameters indicate that hydrogen bonding and weak van der Waals are involved in the interaction between fulvic acid and Tf. The binding of fulvic acid to Tf causes the α-helix structure content of the protein to reduce, and resulting that peptide chains of Tf become more stretched. Our results have indicated a mechanism of the interaction between fulvic acid and Tf, which may provide information for possible design of methods to deliver drug molecules via transferrin to target tissues and cells effectively.

  1. Reference-free total reflection X-ray fluorescence analysis of semiconductor surfaces with synchrotron radiation.

    Science.gov (United States)

    Beckhoff, Burkhard; Fliegauf, Rolf; Kolbe, Michael; Müller, Matthias; Weser, Jan; Ulm, Gerhard

    2007-10-15

    Total reflection X-ray fluorescence (TXRF) analysis is a well-established method to monitor lowest level contamination on semiconductor surfaces. Even light elements on a wafer surface can be excited effectively when using high-flux synchrotron radiation in the soft X-ray range. To meet current industrial requirements in nondestructive semiconductor analysis, the Physikalisch-Technische Bundesanstalt (PTB) operates dedicated instrumentation for analyzing light element contamination on wafer pieces as well as on 200- and 300-mm silicon wafer surfaces. This instrumentation is also suited for grazing incidence X-ray fluorescence analysis and conventional energy-dispersive X-ray fluorescence analysis of buried and surface nanolayered structures, respectively. The most prominent features are a high-vacuum load-lock combined with an equipment front end module and a UHV irradiation chamber with an electrostatic chuck mounted on an eight-axis manipulator. Here, the entire surface of a 200- or a 300-mm wafer can be scanned by monochromatized radiation provided by the plane grating monochromator beamline for undulator radiation in the PTB laboratory at the electron storage ring BESSY II. This beamline provides high spectral purity and high photon flux in the range of 0.078-1.86 keV. In addition, absolutely calibrated photodiodes and Si(Li) detectors are used to monitor the exciting radiant power respectively the fluorescence radiation. Furthermore, the footprint of the excitation radiation at the wafer surface is well-known due to beam profile recordings by a CCD during special operation conditions at BESSY II that allow for drastically reduced electron beam currents. Thus, all the requirements of completely reference-free quantitation of TXRF analysis are fulfilled and are to be presented in the present work. The perspectives to arrange for reference-free quantitation using X-ray tube-based, table-top TXRF analysis are also addressed.

  2. Quantitative analysis of trace palladium contamination in solution using electrochemical X-ray fluorescence (EC-XRF).

    Science.gov (United States)

    Ayres, Zoë J; Newton, Mark E; Macpherson, Julie V

    2016-06-07

    The application of electrochemical X-ray fluorescence (EC-XRF), for the detection of palladium (Pd) contamination in a range of solutions containing electrochemically active compounds, present in excess and relevant to the pharmaceutical and food industries, is reported. In EC-XRF, EC is used to electrochemically pre-concentrate metal on an electrode under forced convection conditions, whilst XRF is employed to spectroscopically quantify the amount of metal deposited, which quantitatively correlates with the original metal concentration in solution. Boron doped diamond is used as the electrode due to its very wide cathodic window and the fact that B and C are non-interfering elements for XRF analysis. The effect of several parameters on the Pd XRF signal intensity are explored including: deposition potential (Edep), deposition time (tdep) and Pd(2+) concentration, [Pd(2+)]. Under high deposition potentials (Edep = -1.5 V), the Pd XRF peak intensity varies linearly with both tdep and [Pd(2+)]. Quantification of [Pd(2+)] is demonstrated in the presence of excess acetaminophen (ACM), l-ascorbic acid, caffeine and riboflavin. We show the same Pd XRF signal intensity (for [Pd(2+)] = 1.1 μM and tdep = 325 s) is observed, i.e. same amount of Pd is deposited on the electrode surface, irrespective of whether these redox active molecules are present or absent. For tdep = 900 s we report a limit of detection for [Pd(2+)] of 3.6 ppb (34 nM). Even lower LODs are possible by increasing tdep or by optimising the X-ray source specifically for Pd. The work presented for Pd detection in the presence of ACM, achieves the required detection sensitivity stipulated by international pharmacopeia guidelines.

  3. Morphological and spectroscopic analysis of cellulose nanocrystals extracted from oil palm empty fruit bunch fiber

    Energy Technology Data Exchange (ETDEWEB)

    Dasan, Y. K., E-mail: aamir.bhat@petronas.com.my; Bhat, A. H., E-mail: aamir.bhat@petronas.com.my [Department of Fundamental and Applied Sciences, Universiti Teknologi PETRONAS, 31750, Bandar Seri Iskandar, Perak (Malaysia); Faiz, A., E-mail: faizahmad@petronas.com.my [Department of Mechanical Engineering, Universiti Teknologi PETRONAS, 31750, Bandar Seri Iskandar, Perak (Malaysia)

    2015-07-22

    This work evaluates the use of oil palm empty fruit bunch (OPEFB) fiber as a source of cellulose to obtain nanocrystalline cellulose (CNC) by acid hydrolysis reaction. The raw OPEFB fibers were pretreated with aqueous Sodium hydroxide at 80°C followed by bleaching treatment and further hydrolyzed with Sulphuric acid at 45°C with limited range of hydrolysis time and acid concentration. The resulting CNC’s were characterized for spectroscopic, crystallographic and morphological properties using Fourier Transform Infrared Spectroscopy (FTIR), X-ray Diffractometer (XRD), Transmission Electron Microscope (TEM) and Atomic Force Microscopy (AFM). Finding of this study shows that the properties of CNC’s are strongly dependent on the hydrolysis time and acid concentration.

  4. Simple preparation of new N-aryl-N-(3-indolmethyl acetamides and their spectroscopic analysis

    Directory of Open Access Journals (Sweden)

    José A. Henao

    2009-12-01

    Full Text Available To prepare new indolic molecules and characterize them by spectroscopic methods. Materials and methods: All reagentswere purchased from Aldrich, commercial grade. The purity of the products and the composition of the reaction mixtures were monitoredby thin layer chromatography over Silufol UV254 0.25 mm-thick chromatoplates. Product isolation and purification were performed bycolumn chromatography (SiO2, using ethyl acetate-petroleum ether mixtures as eluents. Results. The synthesis of new N-aryl-N-(3-indolmethyl acetamides based on first step iminization reaction of indol-3-carbaldehyde is accomplished. The structures of the C-3substituted indoles were confirmed by 1H-NMR and 13C-NMR studies supported by inverse-detected 2D NMR experiments and alsothrough monocrystal X-ray diffraction. Conclusions. An efficient, economic, and fast synthetic route was designed to the construction ofthe N-aryl-N-(3-indolmethyl acetamides, structural analogues of some alkaloids.

  5. In-situ spectroscopic analysis of the traditional dyeing pigment Turkey red inside textile matrix

    Science.gov (United States)

    Meyer, M.; Huthwelker, T.; Borca, C. N.; Meßlinger, K.; Bieber, M.; Fink, R. H.; Späth, A.

    2018-03-01

    Turkey red is a traditional pigment for textile dyeing and its use has been proven for various cultures within the last three millennia. The pigment is a dye-mordant complex consisting of Al and an extract from R. tinctorum that contains mainly the anthraquinone derivative alizarin. The chemical structure of the complex has been analyzed by various spectroscopic and crystallographic techniques for extractions from textiles or directly in solution. We present an in-situ study of Turkey red by means of μ-XRF mapping and NEXAFS spectroscopy on textile fibres dyed according to a traditional process to gain insight into the coordination chemistry of the pigment in realistic matrix. We find an octahedral coordination of Al that corresponds well to the commonly accepted structure of the Al alizarin complex derived from ex-situ studies.

  6. FluoRender: joint freehand segmentation and visualization for many-channel fluorescence data analysis.

    Science.gov (United States)

    Wan, Yong; Otsuna, Hideo; Holman, Holly A; Bagley, Brig; Ito, Masayoshi; Lewis, A Kelsey; Colasanto, Mary; Kardon, Gabrielle; Ito, Kei; Hansen, Charles

    2017-05-26

    Image segmentation and registration techniques have enabled biologists to place large amounts of volume data from fluorescence microscopy, morphed three-dimensionally, onto a common spatial frame. Existing tools built on volume visualization pipelines for single channel or red-green-blue (RGB) channels have become inadequate for the new challenges of fluorescence microscopy. For a three-dimensional atlas of the insect nervous system, hundreds of volume channels are rendered simultaneously, whereas fluorescence intensity values from each channel need to be preserved for versatile adjustment and analysis. Although several existing tools have incorporated support of multichannel data using various strategies, the lack of a flexible design has made true many-channel visualization and analysis unavailable. The most common practice for many-channel volume data presentation is still converting and rendering pseudosurfaces, which are inaccurate for both qualitative and quantitative evaluations. Here, we present an alternative design strategy that accommodates the visualization and analysis of about 100 volume channels, each of which can be interactively adjusted, selected, and segmented using freehand tools. Our multichannel visualization includes a multilevel streaming pipeline plus a triple-buffer compositing technique. Our method also preserves original fluorescence intensity values on graphics hardware, a crucial feature that allows graphics-processing-unit (GPU)-based processing for interactive data analysis, such as freehand segmentation. We have implemented the design strategies as a thorough restructuring of our original tool, FluoRender. The redesign of FluoRender not only maintains the existing multichannel capabilities for a greatly extended number of volume channels, but also enables new analysis functions for many-channel data from emerging biomedical-imaging techniques.

  7. Quantitative analysis of tear film fluorescence and discomfort during tear film instability and thinning.

    Science.gov (United States)

    Begley, Carolyn; Simpson, Trefford; Liu, Haixia; Salvo, Eliza; Wu, Ziwei; Bradley, Arthur; Situ, Ping

    2013-04-12

    The purpose of this study was to test the association between tear film fluorescence changes during tear break-up (TBU) or thinning and the concurrent ocular sensory response. Sixteen subjects kept one eye open as long as possible (MBI), indicated their discomfort level continuously, and rated ocular sensations of irritation, stinging, burning, pricking, and cooling using visual analog scales (VAS). Fluorescence of the tear film was quantified by a pixel-based analysis of the median pixel intensity (PI), TBU, and percentage of dark pixels (DarkPix) over time. A cutoff of 5% TBU was used to divide subjects into either break-up (BU) or minimal break-up (BUmin) groups. Tear film fluorescence decreased (median PI) and the percentage of TBU and DarkPix increased in all trials, with the rate significantly greater in the BU than the BUmin group (Mann-Whitney U test, P film thinning best explains decreasing tear film fluorescence during trials. This was highly correlated with increasing ocular discomfort, suggesting that both tear film thinning and TBU stimulate underlying corneal nerves, although TBU produced more rapid stimulation. Slow increases in tear film hyperosmolarity may cause the gradual increase in discomfort during slow tear film thinning, whereas the sharp increases in discomfort during TBU suggest a more complex stimulus.

  8. Analysis of metals in organic compounds by energy dispersive X-ray fluorescence analysis

    International Nuclear Information System (INIS)

    Anjos, Marcelino J.; Lopes, Ricardo T.; Jesus, Edgar F.O. de

    2000-01-01

    Using energy dispersive X-ray fluorescence analysis with an X-ray tube filtered with Ti. It was possible to determine the concentration of the elements at ppm level of several elements: K, Ca, Ti, Cr, Mn, Fe, Ni, Cu, Zn As, Rb, Sr, Y, Zr, and Pb in two types of organic compound enough used in the agriculture: organic compound of urban garbage (Fertilurb) and aviary bed (birds manure). The experimental setup is composed of: x-ray tube (Oxford, 30 kV, 50 μA and W anode), an ORTEC Si-Li detector, with an energy resolution of about 180 eV at 5.9 keV and an ORTEC multichannel-analyser. The X-ray beam is quasi- monochromatic by using Ti filter. The samples were prepared in pellet form with superficial density in the range of 100 mg/cm 2 . The fundamental parameter method was used in order to verify the elemental concentration. The radiation transmission method was going used to the radiation absorption effects correction in the samples. (author)

  9. A Cellular Screening Assay Using Analysis of Metal-Modified Fluorescence Lifetime

    Science.gov (United States)

    Cade, Nicholas I.; Fruhwirth, Gilbert; Archibald, Stephen J.; Ng, Tony; Richards, David

    2010-01-01

    Abstract Current methods for screening cell receptor internalization often require complex image analysis with limited sensitivity. Here we describe a novel bioassay based on detection of changes in global fluorescence lifetime above a gold substrate, with superresolution axial sensitivity and no need for image analysis. We show that the lifetime of enhanced green fluorescent protein expressed in a cellular membrane is greatly reduced in close proximity to the gold, resulting in a distance-dependent lifetime distribution throughout the cell. We demonstrate the application of this phenomenon in a screening assay by comparing the efficacies of two small molecule inhibitors interfering with the internalization process of a G protein-coupled receptor. PMID:20513420

  10. Hybrid Microfluidic Platform for Multifactorial Analysis Based on Electrical Impedance, Refractometry, Optical Absorption and Fluorescence

    Directory of Open Access Journals (Sweden)

    Fábio M. Pereira

    2016-10-01

    Full Text Available This paper describes the development of a novel microfluidic platform for multifactorial analysis integrating four label-free detection methods: electrical impedance, refractometry, optical absorption and fluorescence. We present the rationale for the design and the details of the microfabrication of this multifactorial hybrid microfluidic chip. The structure of the platform consists of a three-dimensionally patterned polydimethylsiloxane top part attached to a bottom SU-8 epoxy-based negative photoresist part, where microelectrodes and optical fibers are incorporated to enable impedance and optical analysis. As a proof of concept, the chip functions have been tested and explored, enabling a diversity of applications: (i impedance-based identification of the size of micro beads, as well as counting and distinguishing of erythrocytes by their volume or membrane properties; (ii simultaneous determination of the refractive index and optical absorption properties of solutions; and (iii fluorescence-based bead counting.

  11. Laboratory total reflection X-ray fluorescence analysis for low concentration samples

    Energy Technology Data Exchange (ETDEWEB)

    Hampai, D. [INFN-LNF, XLab Frascati, Via E. Fermi, 40, Frascati I-00044 (Italy); Dabagov, S.B. [INFN-LNF, XLab Frascati, Via E. Fermi, 40, Frascati I-00044 (Italy); RAS P.N. Lebedev Phys. Inst. and Nat. Res. Nucl. Univ. MEPhI Moscow (Russian Federation); Polese, C. [INFN-LNF, XLab Frascati, Via E. Fermi, 40, Frascati I-00044 (Italy); Dip. DICMA, Univ. Roma “Sapienza”, Via Eudossiana 18, Rome (Italy); Liedl, A. [INFN-LNF, XLab Frascati, Via E. Fermi, 40, Frascati I-00044 (Italy); Dip. Scienze Geologiche, Univ. Roma3, Largo San Leonardo Murialdo 1, Rome (Italy); Cappuccio, G. [INFN-LNF, XLab Frascati, Via E. Fermi, 40, Frascati I-00044 (Italy)

    2014-11-01

    Quantitative elemental determination for concentrations in the ppb range requires a careful preparation of the sample. In particular, for elemental analysis of very low concentration samples, less than 1 ng/mm{sup 2}, a very bright X-ray source, typically synchrotron radiation (SR) in total external reflection fluorescence regime (SR-TXRF), is required. Here, we wish to demonstrate that a conventional source combined with a polycapillary semi-lens can provide a quasi-parallel beam intense enough for desktop TXRF analysis of low concentration samples. - Highlights: • Total Reflection X-ray Fluorescence for very low concentration analisys. • Qualitative and quantitative information from trace elements in the ppb range. • Conventional source with polycapillary optics instead Synchrotron Radiation. • Possibility to perform the technique in all kind of laboratories.

  12. The effect of Cu2+ or Fe3+ on the noncovalent binding of rutin with bovine serum albumin by spectroscopic analysis.

    Science.gov (United States)

    Li, Daojin; Zhu, Mei; Xu, Chen; Chen, Jianjun; Ji, Baoming

    2011-01-01

    The interaction of rutin to bovine serum albumin (BSA) in aqueous solution was investigated by fluorescence spectra and ultraviolet-visible (UV-vis) spectra at pH 7.40. There are also some metal ions present in blood plasma, thus the research about the effect of metal ions on the interaction of drugs with proteins is crucial. Therefore, we have studied the effect of Cu2+ or Fe3+ on the interaction between rutin and BSA by using spectroscopic technique at pH 7.40, for the first time. The results of fluorescence titration indicated that rutin could quench the intrinsic fluorescence of BSA in a static quenching way. The binding sites number (n), the binding constant (K) and the spatial-distance (r) of rutin with BSA without or with Cu2+ or Fe3+ at 310 K were calculated. The result showed that the presence of Cu2+ or Fe3+ increased the binding constant and changed the binding distance between the acceptor and the donor, which possibly results from the formation of metal ions-BSA complex. The effect of rutin on the conformation of BSA was also analyzed using UV under experimental conditions. Furthermore, the fluorescence displacement experiments indicated that rutin is situated within subdomain IIA of BSA. Copyright © 2010 Elsevier B.V. All rights reserved.

  13. Structure, characteristics and potential of commercial equipment Total Reflection X Ray Fluorescence for multielemental chemical analysis: Current State

    International Nuclear Information System (INIS)

    Ayala Jimenez, Rony E.

    1999-01-01

    The method Total Reflection X-Ray Fluorescence for chemical multielemental analysis has evolved in the last years with the availability of commercial systems for applications in the field of electronics and chemical multielemental analysis in samples of mineral and biological origin. The basic components of these equipment cam be summarized in a system of excitement, a geometric arrangement (optics) for collimate and monochromatize the primary radiation, a X-rays detector, and the electronic si stem for spectral data acquisition including the software for spectra unfolding, qualitative and quantitative analysis, and the complete instrument operation. Additionally the makers offer the conventional 45 degrees geometry for the excitement solid and liquid samples of bigger volume in direct form. The available bibliographical and commercial information to the moment of preparing this lecture, basically reports the following types of components for the X-rays spectrometers in geometry of total reflection chemical multielemental analysis (they are excluded those RTFX equipment dedicated to the electronic industry for quality control of Si wafers purity used for the production of circuits (chips). Excitation: X-rays tube of high vacuum with power among 1300 to 2000 watts and different types of anode; X-rays ceramic metal tube, with power up to 40 watts, and anode of molybdenum, tug steno, etc. Detection: detector semiconductor of silicon-lithium cooled with liquid nitrogen; detector of solid state silicon cooled electrically (Si-PI N diode or detector of diffused silicon Sdd). Optics: multi stratum monochromator; multi stratum Ni-C monochromator; double multi stratum monochromator. Electronic: spectroscopical amplifier espectroscopico and ana logical digital convertor adapted to a personal computer IBM compatible, with software for qualitative and quantitative analysis of samples by means of Windows, and for the complete operation of the analyzer from the Pc. In this work

  14. Energy dispersion X-ray fluorescence techniques in water pollution analysis

    International Nuclear Information System (INIS)

    Holynska, B.

    1980-01-01

    Advantages and limitations of energy dispersion X-ray fluorescence methods for analysis of pollutants in water are discussed. The necessary equipment for X-ray measurement of insoluble and dissolved trace metals in water is described. Different techniques of enrichment of trace metals are presented: ion exchange on selective Chelex-100 exchanger, precipitation with chelating agents DDTC and APDC, and adsorption on activated carbon. Some results obtained using different preconcentration methods for trace metals determination in different waters are presented. (author)

  15. X-Ray Fluorescence Analysis of Composite Propellants for Army Missile Systems

    Science.gov (United States)

    1977-06-03

    intensity measurements were made by a fixed count technique, and pulse height discrimination was used to increase the peak-to-background ratios for PBAA...Pulse height analysis was used to reduce background and increase the piak-to-background ratios for aluminum and sulfur determinations. Pulse height ... discrimination was less effective for sulfur K measure- Q men:s, however, because the chlorine K fluorescence from the sodium r .- TABLE 2

  16. Determination of potassium concentration in organic samples by means of x-ray fluorescence analysis

    International Nuclear Information System (INIS)

    Soto Moran, R.L.; Szgedi, S.

    1993-01-01

    By means of x-ray fluorescence analysis and the inner standard method using KH 2 PO 4 as the added chemical compound, potassium concentration of roots, stems , leaf, flowers and grains from Quinua (Chenopodium Quinoa Willd). which was previously treated with a nitrogen ed fertilizers has been determined taking into account the increasing effect the average atomic number due to used standard. Experimental errors are lower than 10 %

  17. Determination of pollutants in dwellings by neutron activation analysis and x-ray fluorescence

    International Nuclear Information System (INIS)

    Martinez, T.; Lartigue, J.; Navarrete, M.; Cabrera, L.; Vilchis, V.

    1997-01-01

    Metallic pollutants were measured in dwellings in Mexico city by instrumental neutron activation analysis (INAA) and x-ray fluorescence techniques. Monitoring was performed in the west side of the city and in the winter season. In general the average concentration of contaminants collected, when compared with average concentrations reported in a previous paper, have increased with time and in the particular case of lead and mercury some samples are above the indicative WHO maximum levels. (author)

  18. Spectroscopic analysis of stellar mass black-hole mergers in our local universe with ground-based gravitational wave detectors

    Science.gov (United States)

    Bhagwat, Swetha; Brown, Duncan; Ballmer, Stefan

    2017-01-01

    Motivated by the recent discoveries of binary black-hole mergers by the Advanced Laser Interferometer Gravitational-wave Observatory (Advanced LIGO), we investigate the prospects of ground based detectors to perform a spectroscopic analysis of signals emitted during the ringdown of the Kerr black-hole formed by a stellar mass binary black-hole merger. We investigate the detectability and resolvability of the sub-dominant modes l = m = 3, l = m = 4 and l = 2;m = 1. We find that new ground-based facilities such as Einstein Telescope or Cosmic Explorer could measure multiple ringdown modes in over 300 events per year. We also investigate detector tuning for ringdown oriented searches.

  19. Organic characterisation of cave drip water by LC-OCD and fluorescence analysis

    Science.gov (United States)

    Rutlidge, Helen; Andersen, Martin S.; Baker, Andy; Chinu, Khorshed J.; Cuthbert, Mark O.; Jex, Catherine N.; Marjo, Christopher E.; Markowska, Monika; Rau, Gabriel C.

    2015-10-01

    Cathedral Cave, Wellington, Australia, is a natural laboratory for studying water movement and geochemical processes in the unsaturated zone by using artificial irrigation to activate drip sites within the cave. Water sampled from two drip sites activated by irrigations carried out in summer 2014 was analysed for dissolved inorganic ions and fluorescent organic matter. The analysis allowed the development of a conceptual flow path model for each drip site. DOM analysis was further complemented by liquid chromatography with organic carbon detection (LC-OCD), applied for the first time to karst drip waters, allowing the characterisation of six organic matter fractions. The differences in organic matter fractions at each drip site are interpreted as a signature of the proposed flow paths. LC-OCD was also compared with parallel factor analysis (PARAFAC) of the fluorescence and good correlations were observed for high molecular weight organic matter. Strong positive correlations were also observed for high molecular weight matter and Cu and Ni. This is suggestive of colloidal transport of Cu and Ni by organic matter with high molecular weight, while small molecular weight colloids were not efficient transporters. LC-OCD uniquely provides information on non-fluorescent organic matter and can be used to further quantify drip water organic matter composition.

  20. Application of fluorescence analysis for evaluation of heat stability of Scotch pine needles after ground fires

    Directory of Open Access Journals (Sweden)

    I. V. Kosov

    2017-10-01

    Full Text Available This paper discusses the possibility of using fluorescent methods to assess the thermal effects on Scots pine needles’ assimilation apparatus. Two types of experimental studies were carried out. The assessment of the primary heat resistance of the needles from the forest stand previously unaffected by fire lies at the heart of the first one. To assess the effect of temperature stress on the pine needles’ photosynthetic apparatus functioning, the experiments on modeling a convective flow, simulating the ground fire effect were carried out. The second year needles from the 1st class trees of the green moss-and-motley group of forest types located in the forest-steppe zone of Southern Siberia were studied. According to Fv / Fm fast fluorescence parameter (the maximum photochemical quantum yield of photosystem II, it was demonstrated that after the heat stress, the assimilation apparatus of pine needles can be restored at different rates. This rate depends on the duration and intensity of heating. The second experiment was based upon the task of determining the ability to restore the assimilation apparatus of pine needles after the repeated influence of sub-lethal temperatures on plants in the recovery period after a ground fire of the previous year. Based on the analysis of the parameters of fast and delayed fluorescence, it was possible to detect differences in thermal resistance and the rates of pine needles’ photosynthetic activity reestablishment, which indicates modification of physiological processes in plants under the influence of the thermal stress factor, forming a positive acclimation effect. Thus, fluorescent methods can be used to diagnose the thermal resistance of needles. In particular, the indicator of delayed fluorescence as a criterion for assessing the resistance of the assimilation apparatus in response to the repeated action of stress factors during the recovery from fire. Fv / Fm ratio can be used to assess the response

  1. A new methodology for fluorescence analysis of composite resins used in anterior direct restorations.

    Science.gov (United States)

    de Lima, Liliane Motta; Abreu, Jessica Dantas; Cohen-Carneiro, Flavia; Regalado, Diego Ferreira; Pontes, Danielson Guedes

    2015-01-01

    The aim of this study was to use a new methodology to evaluate the fluorescence of composite resins for direct restorations. Microhybrid (group 1, Amelogen; group 2, Opallis; group 3, Filtek Z250) and nanohybrid (group 4, Filtek Z350 XT; group 5, Brilliant NG; group 6, Evolu-X) composite resins were analyzed in this study. A prefabricated matrix was used to prepare 60 specimens of 7.0 × 3.0 mm (n = 10 per group); the composite resin discs were prepared in 2 increments (1.5 mm each) and photocured for 20 seconds. To establish a control group of natural teeth, 10 maxillary central incisor crowns were horizontally sectioned to create 10 discs of dentin and enamel tissues with the same dimensions as the composite resin specimens. The specimens were placed in a box with ultraviolet light, and photographs were taken. Aperture 3.0 software was used to quantify the central portion of the image of each specimen in shades of red (R), green (G), and blue (B) of the RGB color space. The brighter the B shade in the evaluated area of the image, the greater the fluorescence shown by the specimen. One-way analysis of variance revealed significant differences between the groups. The fluorescence achieved in group 1 was statistically similar to that of the control group and significantly different from those of the other groups (Bonferroni test). Groups 3 and 4 had the lowest fluorescence values, which were significantly different from those of the other groups. According to the results of this study, neither the size nor the amount of inorganic particles in the evaluated composite resin materials predicts if the material will exhibit good fluorescence.

  2. Fluorescence excitation-emission matrix spectra coupled with parallel factor and regional integration analysis to characterize organic matter humification.

    Science.gov (United States)

    He, Xiao-Song; Xi, Bei-Dou; Li, Xiang; Pan, Hong-Wei; An, Da; Bai, Shuo-Guo; Li, Dan; Cui, Dong-Yu

    2013-11-01

    The present several humification indexes cannot provide the whole fluorescence information on organic matter composition and the evaluation results from them are inconsistent sometimes. In this study, fluorescence excitation-emission matrix spectra coupled with parallel factor analysis and fluorescence regional integration analysis were utilized to investigate organic matter humification, and the projection pursuit cluster (PPC) model was applied to form a suitable index for overcoming the difficulties in multi-index evaluation. The result showed that the ratio between the volume of humic- and fulvic-like fluorescence region and the volume of protein-like fluorescence region not only revealed the heterogeneity of organic matter, but also provided more accurate information on organic matter humification. In addition, the results showed that the PPC model could be used to characterize integrally the humification, and the projected characteristic value calculated from the PPC model could be used as the integrated humification evaluation index. Copyright © 2013 Elsevier Ltd. All rights reserved.

  3. Spectroscopic Parameters of Lumbar Intervertebral Disc Material

    Science.gov (United States)

    Terbetas, G.; Kozlovskaja, A.; Varanius, D.; Graziene, V.; Vaitkus, J.; Vaitkuviene, A.

    2009-06-01

    There are numerous methods of investigating intervertebral disc. Visualization methods are widely used in clinical practice. Histological, imunohistochemical and biochemical methods are more used in scientific research. We propose that a new spectroscopic investigation would be useful in determining intervertebral disc material, especially when no histological specimens are available. Purpose: to determine spectroscopic parameters of intervertebral disc material; to determine emission spectra common for all intervertebral discs; to create a background for further spectroscopic investigation where no histological specimen will be available. Material and Methods: 20 patients, 68 frozen sections of 20 μm thickness from operatively removed intervertebral disc hernia were excited by Nd:YAG microlaser STA-01-TH third harmonic 355 nm light throw 0, 1 mm fiber. Spectrophotometer OceanOptics USB2000 was used for spectra collection. Mathematical analysis of spectra was performed by ORIGIN multiple Gaussian peaks analysis. Results: In each specimen of disc hernia were found distinct maximal spectral peaks of 4 types supporting the histological evaluation of mixture content of the hernia. Fluorescence in the spectral regions 370-700 nm was detected in the disc hernias. The main spectral component was at 494 nm and the contribution of the components with the peak wavelength values at 388 nm, 412 nm and 435±5 nm were varying in the different groups of samples. In comparison to average spectrum of all cases, there are 4 groups of different spectral signatures in the region 400-500 nm in the patient groups, supporting a clinical data on different clinical features of the patients. Discussion and Conclusion: besides the classical open discectomy, new minimally invasive techniques of treating intervertebral disc emerge (PLDD). Intervertebral disc in these techniques is assessed by needle, no histological specimen is taken. Spectroscopic investigation via fiber optics through the

  4. Localization and Spectroscopic Analysis of the Cu(I Binding Site in Wheat Metallothionein Ec-1

    Directory of Open Access Journals (Sweden)

    Katsiaryna Tarasava

    2016-03-01

    Full Text Available The early cysteine-labeled metallothionein (MT from Triticum aestivum (common wheat, denoted Ec-1, features two structurally well-defined domains, γ and βE, coordinating two and four Zn(II ions, respectively. While the protein is currently assumed to function mainly in zinc homeostasis, a low amount of copper ions was also recently detected in a native Ec-1 sample. To evaluate the observed copper binding in more detail, the recombinant Zn6Ec-1 form was exposed to different amounts of Cu(I ions and the resulting species characterized with spectroscopic methods. Data reveal that the first Cu(I equivalent coordinates exclusively to the N-terminal γ-domain of the protein and replaces one Zn(II ion. To analyze the ability of the γ-domain for coordination of monovalent metal ions in more detail, the γ-Ec-1 peptide fragment was incubated with increasing amounts of Cu(I and the process monitored with UV–VIS, circular dichroism, and luminescence spectroscopy. Closely similar spectra are observed regardless if the apo- or the metal ion-loaded and, hence, pre-folded forms, were used for the titration experiments with Cu(I. The results indicate that low amounts of Cu(I ions displace the two metal ions subsequently and stoichiometrically, despite the different coordination geometry requirements of Cu(I and Zn(II.

  5. Application of spectroscopic techniques for the analysis of kidney stones: a pilot study

    Science.gov (United States)

    Shameem, K. M., Muhammed; Chawla, Arun; Bankapur, Aseefhali; Unnikrishnan, V. K.; Santhosh, C.

    2016-03-01

    Identification and characterization of kidney stone remains one of the important analytical tasks in the medical field. Kidney stone is a common health complication throughout the world, which may cause severe pain, obstruction and infection of urinary tract, and can lead to complete renal damage. It commonly occurs in both sexes regardless of age. Kidney stones have different composition, although each stones have a major single characteristic component. A complete understanding of a sample properties and their function can only be feasible by utilizing elemental and molecular information simultaneously. Two laser based analytical techniques; Laser Induced Breakdown spectroscopy (LIBS) and Raman spectroscopy have been used to study different types of kidney stones from different patients. LIBS and Raman spectroscopy are highly complementary spectroscopic techniques, which provide elemental and molecular information of a sample. Q-switched Nd:YAG laser at 355 nm laser having energy 17mJ per pulse at 10 Hz repetition rate was used for getting LIBS spectra. Raman measurements were carried out using a home assembled micro-Raman spectrometer. Using the recorded Raman spectra of kidney stones, we were able to differentiate different kinds of kidney stones. LIBS spectra of the same stones are showing the evidence of C, Ca, H, and O and also suggest the presence of certain pigments.

  6. Photometric and Spectroscopic analysis of lensed re-ionising sources at the frontier of the Universe

    Science.gov (United States)

    Laporte, N.; Ellis, R.; Roberts-Borsani, G.; Infante, L.; Zheng, W.; Bauer, F. E.; Bina, D.; Chilingarian, I.; Kim, S.; Pelló, R.; Pérez-Fournon, I.; Richard, J.; Troncoso-Iribarren, P.; Streblyanska, A.

    2016-12-01

    Our team is performing an automatic search for very distant sources using HST, VLT, Magellan, Gemini, Spitzer and ALMA dataset around Frontier Fields aiming to study the nature and properties of sources during the epoch of reionization. In this paper, we report on our photometric sample selection, the photometric properties of our z>6 candidates and the evolution of galaxy number densities during the first billion years from a statistical point of view. Thanks to the huge depth of HST FF data, we identified several z>7 candidates selected in previous HST surveys as mid-z interlopers that could bias our conclusions on the evolution of the first galaxies. We also briefly discuss several interesting objects that will benefit from the arrival of the JWST. The spectroscopic follow-up has just started, and our team is observing a sample of z>7 sources with ground-based spectrographs in order to confirm the redshift of these objects and add robust constraints on their physical properties.

  7. AN INTERFEROMETRIC AND SPECTROSCOPIC ANALYSIS OF THE MULTIPLE STAR SYSTEM HD 193322

    International Nuclear Information System (INIS)

    Ten Brummelaar, Theo A.; Farrington, Christopher D.; Schaefer, Gail H.

    2011-01-01

    The star HD 193322 is a remarkable multiple system of massive stars that lies at the heart of the cluster Collinder 419. Here we report on new spectroscopic observations and radial velocities of the narrow-lined component Ab1 which we use to determine its orbital motion around a close companion Ab2 (P = 312 days) and around a distant third star Aa (P = 35 years). We have also obtained long baseline interferometry of the target in the K' band with the CHARA Array which we use in two ways. First, we combine published speckle interferometric measurements with CHARA separated fringe packet measurements to improve the visual orbit for the wide Aa,Ab binary. Second, we use measurements of the fringe packet from Aa to calibrate the visibility of the fringes of the Ab1,Ab2 binary, and we analyze these fringe visibilities to determine the visual orbit of the close system. The two most massive stars, Aa and Ab1, have masses of approximately 21 and 23 M sun , respectively, and their spectral line broadening indicates that they represent extremes of fast and slow projected rotational velocity, respectively.

  8. Spectroscopic analysis of soil metal contamination around a derelict mine site in the Blue Mountains, Australia

    Science.gov (United States)

    Shamsoddini, A.; Raval, S.; Taplin, R.

    2014-09-01

    Abandoned mine sites pose the potential threat of the heavy metal pollution spread through streams and via runoff leading to contamination of soil and water in their surrounding areas. Regular monitoring of these areas is critical to minimise impacts on water resources, flora and fauna. Conventional ground based monitoring is expensive and sometimes impractical; spectroscopic methods have been emerged as a reliable alternative for this purpose. In this study, the capabilities of the spectroscopy method were examined for modelling soil contamination from around the abandoned silver-zinc mine located at Yerranderie, NSW Australia. The diagnostic characteristics of the original reflectance data were compared with models derived from first and second derivatives of the reflectance data. The results indicate that the models derived from the first derivative of the reflectance data estimate heavy metals significantly more accurately than model derived from the original reflectance. It was also found in this study that there is no need to use second derivative for modelling heavy metal soil contamination. Finally, the results indicate that estimates were of greater accuracy for arsenic and lead compared to other heavy metals, while the estimation for silver was found to be the most erroneous.

  9. Ex-vivo holographic microscopy and spectroscopic analysis of head and neck cancer

    Science.gov (United States)

    Holler, Stephen; Wurtz, Robert; Auyeung, Kelsey; Auyeung, Kris; Paspaley-Grbavac, Milan; Mulroe, Brigid; Sobrero, Maximiliano; Miles, Brett

    2015-03-01

    Optical probes to identify tumor margins in vivo would greatly reduce the time, effort and complexity in the surgical removal of malignant tissue in head and neck cancers. Current approaches involve visual microscopy of stained tissue samples to determine cancer margins, which results in the excision of excess of tissue to assure complete removal of the cancer. Such surgical procedures and follow-on chemotherapy can adversely affect the patient's recovery and subsequent quality of life. In order to reduce the complexity of the process and minimize adverse effects on the patient, we investigate ex vivo tissue samples (stained and unstained) using digital holographic microscopy in conjunction with spectroscopic analyses (reflectance and transmission spectroscopy) in order to determine label-free, optically identifiable characteristic features that may ultimately be used for in vivo processing of cancerous tissues. The tissue samples studied were squamous cell carcinomas and associated controls from patients of varying age, gender and race. Holographic microscopic imaging scans across both cancerous and non-cancerous tissue samples yielded amplitude and phase reconstructions that were correlated with spectral signatures. Though the holographic reconstructions and measured spectra indicate variations even among the same class of tissue, preliminary results indicate the existence of some discriminating features. Further analyses are presently underway to further this work and extract additional information from the imaging and spectral data that may prove useful for in vivo surgical identification.

  10. Photometric and Spectroscopic Analysis of Young, Nearby Open Cluster Collinder 70

    Science.gov (United States)

    Thomann, Clara; James, D. J.; Boberg, O. M.; Cargile, P.; Aarnio, A.

    2013-01-01

    We present the results of a wide-field (80' x 80') photometric and spectroscopic survey of the young open cluster Collinder 70, which is also known as the ORI OB 1b association, centered on the central star of Orion's belt, ɛ Ori (Alnilam). Seventy Coll 70 spectroscopy targets were selected from BVRIc color magnitude diagrams for observation using the CTIO HYDRA multi-object spectrograph; we aimed to identify targets exhibiting Hα in emission and a strong lithium 6708-A line in absorption. About a third of our targets (23/70 stars) are consistent with being youthful members of Coll 70. Intermediate resolution ( 20000) HYDRA Li 6708A equivalent widths and Baraffe et al. (2002) evolutionary models strongly suggest that this association is << 30 Myr. Observational evidence showing that that some stars exhibit primordial levels of lithium, giant-like features in low-resolution spectra and the presence of infra-red excesses indicate that the association is considerably younger than 30 Myr and is a potentially valuable target for age determination using the Lithium Depletion Boundary method.

  11. Integrated Analysis of the Wood Oil from Xanthocyparis vietnamensis Farjon & Hiep. by Chromatographic and Spectroscopic Techniques.

    Science.gov (United States)

    Bazzali, Ophélie; Thai, Tran Huy; Hoi, Tran Minh; Khang, Nguyen Sinh; Hien, Nguyen Thi; Casanova, Joseph; Bighelli, Ange; Tomi, Félix

    2016-06-27

    In order to get better knowledge about the volatiles produced by Xanthocyparis vietnamensis, a species recently discovered in Vietnam, its wood oil has been analyzed by a combination of chromatographic (GC, CC) and spectroscopic (GC-MS, (13)C-NMR) techniques. Forty components that accounted for 87.9% of the oil composition have been identified. The composition is dominated by nootkatene (20.7%), 11,12,13-tri-nor-eremophil-1(10)-en-7-one (17.2%), γ-eudesmol (5.1%), nootkatone (4.7%), valencene (3.5%) and 13-nor-eremophil-1(10)-en-11-one (2.6%). The structure of two new compounds-10-epi-nor-γ-eudesmen-11-one and 12-hydroxy-isodihydroagarofuran-has been elucidated, while 11,12,13-tri-nor-eremophil-1(10)-en-7-ol is reported as a natural product for the first time. The composition of X. vietnamensis wood oil varied drastically from those of leaf oils, dominated by hedycaryol (34.4%), phyllocladene (37.8%) or by pimara-6(14)-15-diene (19.4%).

  12. Integrated Analysis of the Wood Oil from Xanthocyparis vietnamensis Farjon & Hiep. by Chromatographic and Spectroscopic Techniques

    Directory of Open Access Journals (Sweden)

    Ophélie Bazzali

    2016-06-01

    Full Text Available In order to get better knowledge about the volatiles produced by Xanthocyparis vietnamensis, a species recently discovered in Vietnam, its wood oil has been analyzed by a combination of chromatographic (GC, CC and spectroscopic (GC-MS, 13C-NMR techniques. Forty components that accounted for 87.9% of the oil composition have been identified. The composition is dominated by nootkatene (20.7%, 11,12,13-tri-nor-eremophil-1(10-en-7-one (17.2%, γ-eudesmol (5.1%, nootkatone (4.7%, valencene (3.5% and 13-nor-eremophil-1(10-en-11-one (2.6%. The structure of two new compounds—10-epi-nor-γ-eudesmen-11-one and 12-hydroxy-isodihydroagarofuran—has been elucidated, while 11,12,13-tri-nor-eremophil-1(10-en-7-ol is reported as a natural product for the first time. The composition of X. vietnamensis wood oil varied drastically from those of leaf oils, dominated by hedycaryol (34.4%, phyllocladene (37.8% or by pimara-6(14-15-diene (19.4%.

  13. X-ray fluorescence analysis of ancient and medieval brass artifacts from south Moravia

    Energy Technology Data Exchange (ETDEWEB)

    Hlozek, M. [Methodical Centre of Conservation-Technical Museum in Brno, Purkynova 105, 612 00 Brno (Czech Republic); Komoroczy, B. [Institute of Archeology of the Academy of Science of the Czech Republic, Kralovopolska 147, 612 00 Brno (Czech Republic); Trojek, T., E-mail: tomas.trojek@fjfi.cvut.cz [Department of Dosimetry and Application of Ionizing Radiation, Czech Technical University in Prague, Brehova 7, 115 19 Praha 1 (Czech Republic)

    2012-07-15

    This paper deals with an investigation of archeological finds using X-ray fluorescence analysis and microanalysis. The main aim of the investigation was to prove the production of brass in the South Moravian Region (part of the Czech Republic) in former times. The probable brass production technology is described. Various objects dating back to Antiquity and to the Middle Ages were investigated using two X-ray fluorescence systems, and the results of the analyses are discussed. The measurements showed, e.g., that fragments of Roman scale armor and a belt fitting dating back to Antiquity were made of brass. Brass was also identified on the surfaces of various ancient and medieval molds and melting pots. - Highlights: Black-Right-Pointing-Pointer Semiquantitative X-ray fluorescence analysis of archeological finds. Black-Right-Pointing-Pointer Two different gilding techniques of a brass belt terminal found in Brno. Black-Right-Pointing-Pointer Use of brass before the Great Moravian period. Black-Right-Pointing-Pointer Evidence of brass casting in the 12th century in Brno.

  14. Production of the ideal sample shape for Total Reflection X-ray Fluorescence analysis

    Science.gov (United States)

    Horntrich, C.; Kregsamer, P.; Prost, J.; Stadlbauer, F.; Wobrauschek, P.; Streli, C.

    2012-11-01

    Total Reflection X-ray Fluorescence analysis (TXRF) is a well-established analytical method in the semiconductor industry for the analysis of silicon wafer surfaces. For the calibration of the spectrometer typically an external standard is used which is sensitive to quantification errors. In general TXRF is known to allow for linear calibration. For small sample amounts (pg to ng region) the thin film approximation is valid neglecting absorption effects of the exciting and the detected radiation. For higher total amounts of sample the relation between fluorescence intensity and sample amount diverges from linearity (saturation effect). These deviations lead to difficulties in quantification with external standard. Content of the presented work is the production of the ideal TXRF sample shape, which was theoretically determined to be ring shaped. A possibility for the production of samples with ring shape is the use of a nanodispensing system combined with a positioning device. Therewith it is possible to produce ring shaped samples in a controlled way with the ring consisting of individual nanodroplets, so that the wanted diameter of the ring can be chosen. A comparison of the fluorescence intensities emitted by contracted and ring shaped samples shows that the ring shape is not only theoretically the best TXRF shape but also experimentally. It could be proven that for contracted samples the saturation effect occurs at a lower sample mass than for samples with ring shape.

  15. Quantitative analysis and metallic coating thickness measurements by X-ray fluorescence

    International Nuclear Information System (INIS)

    Negrea, Denis; Ducu, Catalin; Malinovschi, Viorel; Moga, Sorin; Boicea, Niculae

    2009-01-01

    Full text: This paperwork covers the use of X-ray fluorescence (XRF) for determining the concentration and the coating thickness on metallic samples. The analysis method presented here may also be applicable to other coatings, providing that the elemental nature of the coating and substrate are compatible with the technical aspects of XRF, such as the absorption coefficient of the system, primary radiation, fluorescent radiation and type of detection. For the coating thickness measurement it was used the substrate-line attenuation method and a computing algorithm was developed. Its advantage relies in the fact that no special calibration with standard samples having different layer thickness is needed. The samples used for evaluation were metallic pieces of iron with zinc-nickel coatings of different thickness obtained by electrochemical deposition. (authors)

  16. Quantitative analysis and metallic coating thickness measurements by X-ray fluorescence

    International Nuclear Information System (INIS)

    Negrea, Denis; Ducu, Catalin; Malinovschi, Viorel; Moga, Sorin; Boicea, Niculae

    2009-01-01

    This work deals with the use of X-ray fluorescence (XRF) for determining the concentration and the coating thickness on metallic samples. The analysis method presented here may also be applicable to other coatings, providing that the elemental nature of the coating and substrate are compatible with the technical aspects of XRF, such as the absorption coefficient of the system, primary radiation, fluorescent radiation and type of detection. For the coating thickness measurement it was used the substrate-line attenuation method and an algorithm was developed. Its advantage relies in the fact that no special calibration with standard samples having different layer thickness is needed. The samples used for evaluation were metallic pieces of iron with zinc-nickel coatings of different thickness obtained by electrochemical deposition. (authors)

  17. Beer analysis by synchrotron radiation total reflection X-ray fluorescence (SR-TXRF)

    Energy Technology Data Exchange (ETDEWEB)

    Moreira, Silvana [Universidade Estadual de Campinas, SP (Brazil). Faculdade de Engenharia Civil, Arquitetura e Urbanismo. Dept. de Recursos Hidricos]. E-mail: silvana@fec.unicamp.br; Vives, Ana Elisa S. de [Universidade Metodista de Piracicaba (UNIMEP), Santa Barbara D' Oeste, SP (Brazil). Faculdade de Engenharia, Arquitetura e Urbanismo]. E-mail: aesvives@unimep.br; Nascimento Filho, Virgilio F. [Centro de Energia Nuclear na Agricultura (CENA), Piracicaba, SP (Brazil). Lab. de Instrumentacao Nuclear]. E-mail: virgilio@cena.usp.br; Zucchi, Orgheda L.D.A. [Sao Paulo Univ., Ribeirao Preto, SP (Brazil). Faculdade de Ciencias Farmaceuticas de Ribeirao Preto]. E-mail: olzucchi@fcfrp.usp.br

    2005-07-01

    In this work the concentrations of P, S, Cl, K, Ca, Mn, Fe, Zn and Br in twenty-nine brands of national and international beers were determined by Synchrotron Radiation Total Reflection X-Ray Fluorescence analysis (SR-TXRF). The results were compared with the limits established by the Brazilian Legislation and the nutritive values established by National Agricultural Library (NAL). The measurements were performed at the X-ray Fluorescence Beamline at Synchrotron Light Source Laboratory, in Campinas, Sao Paulo, Brazil, using a polychromatic beam for excitation. A small volume of 5 {mu}L of sample beers containing just an internal standard, used to correct geometry effects, were analyzed without any pre-treatment. The measuring time was 100 s and the detection limits obtained varied from 1{mu}g.L{sup -1} for Mn and Fe to 15{mu}g.L{sup -1} for P. (author)

  18. Beer analysis by synchrotron radiation total reflection X-ray fluorescence (SR-TXRF)

    International Nuclear Information System (INIS)

    Moreira, Silvana; Vives, Ana Elisa S. de; Nascimento Filho, Virgilio F.; Zucchi, Orgheda L.D.A.

    2005-01-01

    In this work the concentrations of P, S, Cl, K, Ca, Mn, Fe, Zn and Br in twenty-nine brands of national and international beers were determined by Synchrotron Radiation Total Reflection X-Ray Fluorescence analysis (SR-TXRF). The results were compared with the limits established by the Brazilian Legislation and the nutritive values established by National Agricultural Library (NAL). The measurements were performed at the X-ray Fluorescence Beamline at Synchrotron Light Source Laboratory, in Campinas, Sao Paulo, Brazil, using a polychromatic beam for excitation. A small volume of 5 μL of sample beers containing just an internal standard, used to correct geometry effects, were analyzed without any pre-treatment. The measuring time was 100 s and the detection limits obtained varied from 1μg.L -1 for Mn and Fe to 15μg.L -1 for P. (author)

  19. Role of importance of X-ray fluorescence analysis of forensic samples

    International Nuclear Information System (INIS)

    Jha, Shailendra; Sharma, M.

    2009-01-01

    Full text: In the field of forensic science, it is very important to investigate the evidential samples obtained at various crime scenes. X-ray fluorescence (XRF) is used widely in forensic science [1]. Its main strength is its non-destructive nature, thus preserving evidence [2, 3]. In this paper, we report the application of XRF to examine the evidences like purity gold and silver jewelry (Indian Ornaments), remnants of glass pieces and paint chips recovered from crime scenes. The experimental measurements on these samples have been made using X-ray fluorescence spectrometer (LAB Center XRF-1800) procured from Shimazdu Scientific Inst., USA. The results are explained in terms of quantitative/ qualitative analysis of trace elements. (author)

  20. Theoretical and experimental analysis of photonic structures for fluorescent concentrators with increased efficiencies

    Energy Technology Data Exchange (ETDEWEB)

    Goldschmidt, Jan Christoph; Peters, Marius; Blaesi, Benedikt; Gombert, Andreas; Glunz, Stefan; Willeke, Gerhard [Fraunhofer Institute for Solar Energy Systems, Freiburg (Germany); Proenneke, Liv [Institut fuer Physikalische Elektronik, Universitaet Stuttgart, Pfaffenwaldring 47, 70569 Stuttgart (Germany); Steidl, Lorenz; Zentel, Rudolf [Institut fuer Organische Chemie, Universitaet Mainz, Duesbergweg 10-14, 55128 Mainz (Germany); Rau, Uwe [IEF-5 Photovoltaik, Forschungszentrum Juelich, 52425 Juelich (Germany)

    2008-12-15

    In this study we present a theoretical and experimental analysis of the application of photonic band stop filters on top of photovoltaic fluorescent concentrators in order to increase the photon collection efficiency. The light guiding effect of the fluorescent concentrator relies on total internal reflection. The escape cone of total internal reflection is their major loss mechanism. Our ray tracing simulation allows to calculate the beneficial effect of photonic band stop reflection filters, which reduce these losses, and to simulate the angular distribution of the light trapped in the concentrator. We present simulations of the optical properties of 1D and 3D photonic structures and how 3D structures are realized with colloidal opals. We also show that the application of a 1D photonic structure increases the efficiency of a real system by 20% relative. (copyright 2008 WILEY-VCH Verlag GmbH and Co. KGaA, Weinheim) (orig.)

  1. Multielemental analysis in Brazilian cigarettes using total reflection X-ray fluorescence with synchrotron radiation

    International Nuclear Information System (INIS)

    Serpa, Renata F.B.; Jesus, Edgar F.O. de; Lopes, Ricardo T.; Moreira, Silvana

    2005-01-01

    In order to identify major and trace elements in conventional and light Brazilian cigarettes, Total Reflection X-Ray Fluorescence with Synchrotron Radiation (SR-TXRF) was used. The fluorescence measurements were carried out at Brazilian Synchrotron Light Laboratory, Campinas - Sao Paulo. This technique enables detection limit is in the ngg -1 range, which is very useful in elemental tobacco smoke analysis, since it presents most of its elements at a trace level. The major elements identified in tobacco samples were: S, Cl, K, Ca, Mn, Fe and Cd, and the trace elements were: Ti, Cr, Ni, Cu, Zn, Br, Rb, Sr and Ba. However in tobacco smoke samples, there were only two major elements: K and Ca, the others were present a trace level. The rate transfer of tobacco to tobacco smoke was about 2.5 % for all elements studied. (author)

  2. Ultraminiature X-ray fluorescence spectrometer for in-situ geochemical analysis on Mars.

    Science.gov (United States)

    Clark, B. C.; Baird, A. K.

    1973-01-01

    A spectrometer based upon the X-ray fluorescence method of elemental analysis has been developed in an ultraminiature, rugged form suitable for a spacecraft mission to Mars. The instrument employs two radioisotope sources (Fe-55 and Cd-109) which irradiate adjacent areas on a regolith sample. Fluorescent X rays emitted by the sample are detected by four thin-window proportional counters. Using pulse-height discrimination, the energy spectra are determined. Virtually all elements above sodium in the periodic table are detected if present at sufficient levels. Minimum detection limits range from 30 ppm to 2% depending upon the element and the matrix. For most elements, they are below 0.5%. Accuracies also depend upon the matrix, but are generally better than plus or minus 0.5% for all elements of atomic number greater than 14. Elements below sodium are also detected, but as a single group. Ambiguities of identification of the elements producing the observed spectra are minimal.

  3. Analysis of beers from Brazil with synchrotron radiation total reflection X-ray fluorescence

    International Nuclear Information System (INIS)

    Moreira, S.; Vives, A.E.S.; Brienza, S.M.B.; Zucchi, O.L.A.D.; Jesus, E.F.O. de; Nascimento Filho, V.F.

    2006-01-01

    In this study the concentrations of P, S, Cl, K, Ca, Mn, Fe, Zn and Br in twenty-nine brands of national and international beers were determined by synchrotron radiation total reflection X-ray fluorescence analysis (SR-TXRF). The results were compared with the limits established by the Brazilian legislation and the nutritional values established by National Agricultural Library (NAL, USA). The measurements were performed at the X-Ray Fluorescence Beamline at Brazilian National Synchrotron Light Laboratory, in Campinas, Sao Paulo, Brazil, using a polychromatic beam for excitation. A small volume of 5 μl of beers containing an internal standard used to correct geometry effects was analyzed without pretreatment. The measuring time was 100 seconds and the detection limits obtained varied from 1 μg x l -1 for Mn and Fe to 15 μg x l -1 for P. (author)

  4. Nondestructive analysis of silver in gold foil using synchrotron radiation X-ray fluorescence spectrometry

    International Nuclear Information System (INIS)

    Kasamatsu, Masaaki; Suzuki, Yasuhiro; Suzuki, Shinichi; Nakanishi, Toshio; Shimoda, Osamu; Nishiwaki, Yoshinori; Miyamoto, Naoki

    2005-01-01

    Small particles of gold foil detached from an indoor decoration might be important evidence to associate a suspect with a crime scene. We have investigated the application of elemental analysis using synchrotron radiation X-ray fluorescence spectrometry to discriminate small particles of gold foil. Eight kinds of gold foil samples collected in Japan were used in the experiments. As a result of synchrotron radiation X-ray fluorescence spectrometry, only two elements, gold and silver, were detected from all gold foil samples. The intensity ratios of AgK α /AuL α showed good correlation with the content ratios of Ag/Au. The variation of intensity ratio within a same sample was sufficiently small compared with those of different samples. Therefore the comparison of this intensity ratio can be an effective method to discriminate small particles originating from different types of gold foil. (author)

  5. Spectroscopic analysis of the riboflavin-serum albumins interaction on silver nanoparticles

    Energy Technology Data Exchange (ETDEWEB)

    Voicescu, Mariana, E-mail: voicescu@icf.ro; Angelescu, Daniel G. [Institute of Physical Chemistry ' Ilie Murgulescu' , Romanian Academy (Romania); Ionescu, Sorana [University of Bucharest, Department of Physical Chemistry (Romania); Teodorescu, Valentin S. [Institute of Atomic Physics, National Institute of Materials Physics (Romania)

    2013-04-15

    Spectrophotometric behavior of riboflavin (RF) adsorbed on silver nanoparticles as well as its interaction with two serum albumins, BSA and HSA, respectively, has been evidenced. The time evolution of the plasmonic features of the complexes formed by RF/BSA/HSA and Ag(0) nanoparticles having an average diameter of 10.0 {+-} 2.0 nm have been investigated by UV-Vis absorption spectroscopy. Using steady-state and time-resolved fluorescence spectroscopy, the structure, stability, and dynamics of the serum albumins have been studied. The efficiency of energy transfer process between RF and serum albumins on silver nanoparticles has been estimated. A reaction mechanism of RF with silver nanoparticles is also proposed and the results are discussed with relevance to the involvement of the silver nanoparticles to the redox process of RF and to the RF-serum albumins interaction into a silver nanoparticles complex.

  6. Spectroscopic analysis of the riboflavin—serum albumins interaction on silver nanoparticles

    Science.gov (United States)

    Voicescu, Mariana; Angelescu, Daniel G.; Ionescu, Sorana; Teodorescu, Valentin S.

    2013-04-01

    Spectrophotometric behavior of riboflavin (RF) adsorbed on silver nanoparticles as well as its interaction with two serum albumins, BSA and HSA, respectively, has been evidenced. The time evolution of the plasmonic features of the complexes formed by RF/BSA/HSA and Ag(0) nanoparticles having an average diameter of 10.0 ± 2.0 nm have been investigated by UV-Vis absorption spectroscopy. Using steady-state and time-resolved fluorescence spectroscopy, the structure, stability, and dynamics of the serum albumins have been studied. The efficiency of energy transfer process between RF and serum albumins on silver nanoparticles has been estimated. A reaction mechanism of RF with silver nanoparticles is also proposed and the results are discussed with relevance to the involvement of the silver nanoparticles to the redox process of RF and to the RF-serum albumins interaction into a silver nanoparticles complex.

  7. A comparative analysis of five chrome green pigments based on different spectroscopic techniques

    International Nuclear Information System (INIS)

    Desnica, V.; Furic, K.; Hochleitner, B.; Mantler, M.

    2003-01-01

    A detailed study of five chrome-based green pigments belonging to a large pigment collection at the Academy of Fine Arts in Vienna, Austria has been performed. The samples were analyzed and compared using the two X-ray methods--X-ray fluorescence and X-ray diffraction, and the two optical methods--Raman spectroscopy and infrared spectroscopy. The composition differences between the similarly denoted samples of the collection were determined and the significant sensitivity differences of the investigated methods to specific compounds have been established. This relative discrepancy of the obtained results depending on the technique used proved once again the need of a combined use of the investigated methods

  8. Concentration dependent switch in the kinetic pathway of lysozyme fibrillation: Spectroscopic and microscopic analysis

    Science.gov (United States)

    Kiran Kumar, E.; Prasad, Deepak Kumar; Prakash Prabhu, N.

    2017-08-01

    Formation of amyloid fibrils is found to be a general tendency of many proteins. Investigating the kinetic mechanisms and structural features of the intermediates and the final fibrillar state is essential to understand their role in amyloid diseases. Lysozyme, a notable model protein for amyloidogenic studies, readily formed fibrils in vitro at neutral pH in the presence of urea. It, however, showed two different kinetic pathways under varying urea concentrations when probed with thioflavin T (ThT) fluorescence. In 2 M urea, lysozyme followed a nucleation-dependent fibril formation pathway which was not altered by varying the protein concentration from 2 mg/ml to 8 mg/ml. In 4 M urea, the protein exhibited concentration dependent change in the mechanism. At lower protein concentrations, lysozyme formed fibrils without any detectable nuclei (nucleation-independent polymerization pathway). When the concentration of the protein was increased above 3 mg/ml, the protein followed nucleation-dependent polymerization pathway as observed in the case of 2 M urea condition. This was further verified using microscopic images of the fibrils. The kinetic parameters such as lag time, elongation rate, and fibrillation half-time, which were derived from ThT fluorescence changes, showed linear dependency against the initial protein concentration suggested that under the nucleation-dependent pathway conditions, the protein followed primary-nucleation mechanism without any significant secondary nucleation events. The results also suggested that the differences in the initial protein conformation might alter the mechanism of fibrillation; however, at the higher protein concentrations lysozyme shifted to nucleation-dependent pathway.

  9. Application of laser induced fluorescence analysis to nuclear fuel reprocessing plant

    Energy Technology Data Exchange (ETDEWEB)

    Hayashibara, Hirofumi; Miyake, Takafumi; Izumi, Jyun [Mitsubishi Heavy Industries Ltd., Takasago, Hyogo (Japan). Takasago Research and Development Center; Taguchi, Syouzou; Watanabe, Ryuuichi

    1996-09-01

    In nuclear fuel reprocessing plants, to maintain the system integrity, many kinds of chemical analysis must be done. However, with chemical analysis performed under a high radiation field, to reduce the occupational radiation exposure, a new type of trace analysis technique is desirable, concerning the technique of trace analysis, a laser ray method enables us to achieve higher sensitivity and selectivity than the conventional methods, due to its higher energy and narrow spectral width. Then, we developed a laser induced fluorescence (LIF) method and performed an application study for fuel reprocessing plants by using the simulated samples. Main investigated analyzed elements are an impurities of uranium in nitric acid solution. As a result of this investigation, a pretreatment procedure of analysis was found to be simple compared with the conventional analysis method. (author)

  10. Fast neutron activation analysis and radioisotope X-ray fluorescence study on KALEWA and NAMMA coal

    International Nuclear Information System (INIS)

    Naing-Win

    1981-07-01

    Kalewa coal was studied with Fast Neutron Activation Analysis (FNAA) technique, employing KAMAN A-710 neutron generator and HP(Ge) detector coupled to ''Canberra'' series 30 MCA. Sequential irradiation and dual aluminium foil monitoring method was employed. Simultaneous multielement analysis was carried out. Namma Coal was studied with radioisotope X-ray Fluorescence (XRF) technique, employing Co-57 exciter source and HP(Ge) detector coupled to ''Canberra'' series 40 MCA. In both FNAA and XRF study, the results obtained were compared to that obtained with Atomic Absorption Spectrophotometry (AAS) technique. Finally, the results were reviewed together with those obtained from similar work on coal with FNAA and XRF techniques. (author)

  11. The x-rays fluorescence applied to the analysis of alloys

    International Nuclear Information System (INIS)

    Gutierrez, D.A.

    1997-01-01

    This work is based on the utilization of the Fluorescence of X Rays. This technique of non destructive trial, has the purpose to establish a routine method, for the control of the conformation of industrial samples used. It makes an analysis with a combination of the algorithms of Rasberry-Heinrich and Claisse-Thinh. Besides, the numerical implementation of non usual techniques in this type of analysis. Such as the Linear Programming applied to the solution of super determined systems, of equations and the utilization of methods of relaxation to facilitate the convergence to the solutions. (author) [es

  12. Pattern recognition on X-ray fluorescence records from Copenhagen lake sediments using principal component analysis

    DEFF Research Database (Denmark)

    Schreiber, Norman; Garcia, Emanuel; Kroon, Aart

    2014-01-01

    Principle Component Analysis (PCA) was performed on chemical data of two sediment cores from an urban fresh-water lake in Copenhagen, Denmark. X-ray fluorescence (XRF) core scanning provided the underlying datasets on 13 variables (Si, K, Ca, Ti, Cr, Mn, Fe, Ni, Cu, Zn, Rb, Cd, Pb). Principle...... Component Analysis helped to trace geochemical patterns and temporal trends in lake sedimentation. The PCA models explained more than 80 % of the original variation in the datasets using only 2 or 3 principle components. The first principle component (PC1) was mostly associated with geogenic elements (Si, K...

  13. Data processing of X-ray fluorescence analysis using an electronic computer

    International Nuclear Information System (INIS)

    Yakubovich, A.L.; Przhiyalovskij, S.M.; Tsameryan, G.N.; Golubnichij, G.V.; Nikitin, S.A.

    1979-01-01

    Considered are problems of data processing of multi-element (for 17 elements) X-ray fluorescence analysis of tungsten and molybdenum ores. The analysis was carried out using silicon-lithium spectrometer with the energy resolution of about 300 eV and a 1024-channel analyzer. A characteristic radiation of elements was excited with two 109 Cd radioisotope sources, their general activity being 10 mCi. The period of measurements was 400 s. The data obtained were processed with a computer using the ''Proba-1'' and ''Proba-2'' programs. Data processing algorithms and computer calculation results are presented

  14. Exploratory analysis for the identification of false banknotes using portable X-ray Fluorescence spectrometer.

    Science.gov (United States)

    Zamalloa Jara, M A; Luízar Obregón, C; Araujo Del Castillo, C

    2018-05-01

    The aim of this study was to verify if a portable X-ray fluorescence (pXRF) spectrometer can recognize the security features in banknotes that are reproducible by counterfeiters. Peruvian Nuevo Sol banknotes were studied: 4 genuine and 3 fake ones, in 11 points of analysis for each one, at all 77 data set. The correlation analysis of spectra among original notes was 1.0, and there was no correlation with fake banknotes. pXRF prove that two security features were reproducible for counterfeiters. Copyright © 2018 The Authors. Published by Elsevier Ltd.. All rights reserved.

  15. Laboratory total reflection X-ray fluorescence analysis for low concentration samples

    Science.gov (United States)

    Hampai, D.; Dabagov, S. B.; Polese, C.; Liedl, A.; Cappuccio, G.

    2014-11-01

    Quantitative elemental determination for concentrations in the ppb range requires a careful preparation of the sample. In particular, for elemental analysis of very low concentration samples, less than 1 ng/mm2, a very bright X-ray source, typically synchrotron radiation (SR) in total external reflection fluorescence regime (SR-TXRF), is required. Here, we wish to demonstrate that a conventional source combined with a polycapillary semi-lens can provide a quasi-parallel beam intense enough for desktop TXRF analysis of low concentration samples.

  16. Spectroscopic data

    CERN Document Server

    Melzer, J

    1976-01-01

    During the preparation of this compilation, many people contributed; the compilers wish to thank all of them. In particular they appreciate the efforts of V. Gilbertson, the manuscript typist, and those of K. C. Bregand, J. A. Kiley, and W. H. McPherson, who gave editorial assistance. They would like to thank Dr. J. R. Schwartz for his cooperation and encouragement. In addition, they extend their grati­ tude to Dr. L. Wilson of the Air Force Weapons Laboratory, who gave the initial impetus to this project. v Contents I. I ntroduction . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 1 . . . . . . . . . . . . . . . . 11. Organization ofthe Spectroscopic Table. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 2 Methods of Production and Experimental Technique . . . . . . . . . . . . . . . . . . . . . . . . . . . . 2 Band Systems . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 2...

  17. High-Resolution Calibration of the SDSS/SEGUE Spectroscopic Analysis Pipeline

    Science.gov (United States)

    Sivarani, T.; Beers, T. C.; Lee, Y.; Krugler, J.; Wilhelm, R.; Allende Prieto, C.; Sneden, C.; Lambert, D. L.; Shetrone, M.; Johnson, J.; Ivans, I.; Rockosi, C.; Lai, D.; Morrison, H.; Aoki, W.

    2006-12-01

    We present a discussion of efforts to obtain external validation of the estimated atmospheric parameters (Teff, log g, [Fe/H]) obtained from medium-resolution (R = 2000) SDSS spectroscopy and ugriz photometry, which are being employed for both the completed SDSS-I and the ongoing SEGUE survey. The SDSS/SEGUE spectroscopic pipeline makes use of a number of methods for the estimation of each parameter, with estimated internal errors on the order of σ(Teff) = 150 K, σ(log g) = 0.4 dex, and σ([Fe/H]) = 0.3 dex. Over the course of the past two years, we have obtained over 100 high-resolution optical spectra of SDSS/SEGUE stars using the HET, KECK and SUBARU telescopes. For the KECK/HIRES spectra, which have R = 40000, we have performed standard high-resolution analyses to estimate the stellar parameters. For the HET and KECK-ESI data, which have R = 15000 and R = 5000, respectively, we have performed synthetic spectra matching in order to to estimate the stellar parameters. We find that the derived stellar parameters agree well with the SDSS/SEGUE pipeline estimates for the temperature range 5000 K 6500 K. The main reason for these offsets appears to arise due to varying microturbulence, for which the medium-resolution SDSS spectra are not sensitive. We also have performed external checks on pipline radial velocities. We find that the errors in radial velocities are on the order of 7 km/s for stars, which is at the expected level.

  18. Fluorescence spectral analysis for the discrimination of complex, similar mixtures with the aid of chemometrics.

    Science.gov (United States)

    Ni, Yongnian; Lai, Yanhua; Kokot, Serge

    2012-07-01

    An analytical method for the classification of complex real-world samples was researched and developed with the use of excitation-emission fluorescence matrix (EEFM) spectroscopy, using the medicinal herbs, Rhizoma corydalis decumbentis (RCD) and Rhizoma corydalis (RC) as example samples. The data set was obtained from various authentic RCD-A and RC-A, adulterated AD, and commercial RCD-C and RC-C samples. The spectra (range: λ(ex) = 215∼395 nm and λ(em) = 290∼560 nm), arranged in two- and three-way data matrix formats, were processed using principal component analysis (PCA) and parallel factor analysis (PARAFAC) to produce two-dimensional component-by-component plots for qualitative data classification. The RCD-A and RC-A object groups were clearly discriminated, but the AD and the RCD-C as well as RC-C samples were less well separated. PARAFAC analysis produced somewhat better discrimination, and loadings plots revealed the presence of the marker compound Protopine-a strongly fluorescing substance-as well as at least two other unidentified fluorescent components. Classification performance of the common K-nearest neighbors (KNN) and linear discrimination analysis (LDA) methods was relatively poor when compared with that of the back propagation- and radial basis function-artificial neural networks (BP-ANN and RBF-ANN) models on the basis of two- and three-way formatted data. The best results were obtained with the three-way fingerprints and the RBF-ANN model. Subsequently, the quality of the commercial samples (RCD-C and RC-C) was classified on the best optimized RBF-ANN model. Thus, EEFM spectroscopy, which provides three-way measured data, is potentially a powerful analytical technique for the analysis of complex real-world substances provided the classification is performed by the RBF-ANN or similar ANN methods.

  19. Flow cytometric analysis of the granulocyte respiratory burst: a comparison study of fluorescent probes.

    Science.gov (United States)

    Vowells, S J; Sekhsaria, S; Malech, H L; Shalit, M; Fleisher, T A

    1995-01-13

    Chronic granulomatous disease (CGD) is a rare recessive disorder caused by defects in the NADPH oxidase enzyme complex of phagocytes (neutrophils, eosinophils and monocytes). CGD phagocytes fail to produce superoxide and other reactive oxygen species following cell activation (Malech, 1993). The products of oxidase activation can be measured in individual cells by flow cytometry using specific fluorescent probes that increase fluorescence upon oxidation (Trinkle et al., 1987). This approach can be used to confirm a diagnosis of CGD, and to detect the normal/abnormal phagocyte mixture that characterizes the X-linked CGD carrier state. Three fluorescent probes have been described as useful for this purpose: 2'7'-dichlorofluorescin diacetate (DCF) (Bass et al., 1983), 5,6-carboxy-2'7'-dichlorofluorescein diacetate, bis(acetoxymethyl) ester (C-DCF) (Hockenbery et al., 1993) and dihydrorhodamine 123 (DHR) (Rothe et al., 1988; Kinsey et al., 1987). A direct comparison between these three probes has not been reported. In this study we performed a direct comparison between these three probes, evaluating their ability in flow cytometric analysis to maximize fluorescent separation between activated CGD patient and normal granulocytes. Using a whole blood technique with phorbol myristate acetate (PMA) as an activator, it was found that DHR loaded normal granulocytes had a fluorescence intensity which, upon activation, was 48-fold higher than that of C-DCF loaded granulocytes and seven-fold higher than DCF loaded granulocytes (P < 0.001). Use of sodium azide to decrease the catabolism of H2O2 enhanced the fluorescence of DCF by 140%, C-DCF by 45% and DHR by 25%, suggesting that DCF is primarily sensitive to H2O2. DCF and DHR were then evaluated for sensitivity in the detection of small percentages of normal cells in a CGD/normal granulocyte mixture. Normal sub-populations as small as 0.1% could clearly be distinguished using DHR, while DCF was insensitive at this level. Based

  20. Specific binding of a dihydropyrimidinone derivative with DNA: Spectroscopic, calorimetric and modeling investigations

    Energy Technology Data Exchange (ETDEWEB)

    Wang Gongke, E-mail: wanggongke@126.com [School of Chemistry and Environmental Science, Key Laboratory of Green Chemical Media and Reactions, Ministry of Education, Henan Normal University, Xinxiang, Henan 453007 (China); Yan Changling; Wang Dongchao; Li Dan [School of Chemistry and Environmental Science, Key Laboratory of Green Chemical Media and Reactions, Ministry of Education, Henan Normal University, Xinxiang, Henan 453007 (China); Lu Yan, E-mail: yanlu2001@sohu.com [School of Chemistry and Environmental Science, Key Laboratory of Green Chemical Media and Reactions, Ministry of Education, Henan Normal University, Xinxiang, Henan 453007 (China)

    2012-07-15

    One of the dihydropyrimidinone derivative 5-(ethoxycarbonyl)-6-methyl-4-(4-methoxyphenyl) -3,4-dihydropyrimidin-2(1H)-one (EMMD) was synthesized, and its binding properties with calf-thymus DNA (ctDNA) were investigated using spectroscopic, viscometric, isothermal titration calorimetric (ITC) and molecular modeling techniques. Fluorescence spectra suggested that the fluorescence enhancement of the binding interaction of EMMD to ctDNA was a static process with ground state complex formation. The binding constant determined with spectroscopic titration and ITC was found to be in the same order of 10{sup 4} M{sup -1}. According to the results of the viscosity analysis, fluorescence competitive binding experiment, fluorescence quenching studies, absorption spectral and ITC investigations, it can be concluded that EMMD is intercalative binding to ctDNA. Furthermore, the results of molecular modeling confirmed those obtained from spectroscopic, viscosimetric and ITC investigations. Additionally, ITC studies also indicated that the binding interaction is predominantly enthalpy driven. - Highlights: Black-Right-Pointing-Pointer Medically important dihydropyrimidinones derivative EMMD is synthesized. Black-Right-Pointing-Pointer EMMD is intercalative binding into ctDNA helix. Black-Right-Pointing-Pointer Hydrogen bonding may play an essential role in the binding of EMCD with ctDNA. Black-Right-Pointing-Pointer This binding interaction is predominantly enthalpy driven.

  1. Analysis of heterogeneous gallstones using laser-induced breakdown spectroscopy (LIBS) and wavelength dispersive X-ray fluorescence (WD-XRF).

    Science.gov (United States)

    Jaswal, Brij Bir S; Kumar, Vinay; Sharma, Jitendra; Rai, Pradeep K; Gondal, Mohammed A; Gondal, Bilal; Singh, Vivek K

    2016-04-01

    Laser-induced breakdown spectroscopy (LIBS) is an emerging analytical technique with numerous advantages such as rapidity, multi-elemental analysis, no specific sample preparation requirements, non-destructiveness, and versatility. It has been proven to be a robust elemental analysis tool attracting interest because of being applied to a wide range of materials including biomaterials. In this paper, we have performed spectroscopic studies on gallstones which are heterogeneous in nature using LIBS and wavelength dispersive X-ray fluorescence (WD-XRF) techniques. It has been observed that the presence and relative concentrations of trace elements in different kind of gallstones (cholesterol and pigment gallstones) can easily be determined using LIBS technique. From the experiments carried out on gallstones for trace elemental mapping and detection, it was found that LIBS is a robust tool for such biomedical applications. The stone samples studied in the present paper were classified using the Fourier transform infrared (FTIR) spectroscopy. WD-XRF spectroscopy has been applied for the qualitative and quantitative analysis of major and trace elements present in the gallstone which was compared with the LIBS data. The results obtained in the present paper show interesting prospects for LIBS and WD-XRF to study cholelithiasis better.

  2. Synthesis, structural characterization, Hirshfeld surface analysis and spectroscopic studies of cadmium (II) chloride complex with 4-hydroxy-1-methylpiperidine

    Energy Technology Data Exchange (ETDEWEB)

    Soudani, S. [Université de Carthage, Laboratoire de Chimie des Matériaux, Faculté des Sciences de Bizerte, 7021 Zarzouna (Tunisia); Ferretti, V. [Department of Chemical and Pharmaceutical Sciences and Center for Structural Diffractometry, via Fossato di Mortara 17, I-44121 Ferrara (Italy); Jelsch, C. [CRM2, CNRS, Institut Jean Barriol, Université de Lorraine, Vandoeuvre les Nancy CEDEX (France); Lefebvre, F. [Laboratoire de Chimie Organométallique de Surface (LCOMS), Ecole Supérieure de Chimie Physique Electronique, 69626 Villeurbanne Cedex (France); Nasr, C. Ben, E-mail: cherif_bennasr@yahoo.fr [Université de Carthage, Laboratoire de Chimie des Matériaux, Faculté des Sciences de Bizerte, 7021 Zarzouna (Tunisia)

    2016-05-15

    The chemical preparation, crystal structure, Hirshfeld surface analysis and spectroscopic characterization of the novel cadmium (II) 4-hydroxy-1-methylpiperidine complex, Cd{sub 4}Cl{sub 10}(C{sub 6}H{sub 14}NO){sub 2}·2H{sub 2}O, have been reported. The atomic arrangement can be described as built up by an anionic framework, formed by edge sharing CdCl{sub 6} and CdCl{sub 5}O octahedral linear chains spreading along the a-axis. These chains are interconnected by water molecules via O–H⋯Cl and O–H⋯O hydrogen bonds to form layers parallel to (011) plane. The organic cations are inserted between layers through C–H⋯Cl hydrogen bonds. Investigation of intermolecular interactions and crystal packing via Hirshfeld surface analysis reveals that the H{sub C}⋯Cl and H{sub C}⋯H{sub C} intermolecular interactions are the most abundant contacts of the organic cation in the crystal packing. The statistical analysis of crystal contacts reveals the driving forces in the packing formation. The {sup 13}C and {sup 15}N CP-MAS NMR spectra are in agreement with the X-ray structure. The vibrational absorption bands were identified by infrared spectroscopy. DFT calculations allowed the attribution of the NMR peaks and of the IR bands.

  3. Analysis of kiwi fruit (Accented deliciosa) by energy dispersive X-ray fluorescence spectra

    International Nuclear Information System (INIS)

    Oliveira, Ana Claudia S.; Oliveira, Marcia L. de; Silva, Lucia C.A.S.; Arthur, Valter; Almeida, Eduardo

    2011-01-01

    The search for a healthy life has led consumers to eat fruits and vegetables in place of manufactured products, however, the demand for minimally processed products has evolved rapidly. The kiwi has at least eight nutrients beneficial to health: calcium, magnesium, manganese, phosphorus, iron, potassium, sodium and has also high vitamin C, which has wide acceptance in consumer markets. Energy dispersive spectroscopy X-ray (EDX) is the analytical technique used for elemental analysis or chemical characterization of a sample. It is a variant of fluorescence spectroscopy X-ray based on the sample through an investigation of interactions between electromagnetic radiation and matter, analyzing X-rays emitted by matter in response to being struck by charged particles. The aim of this study were to determine potassium, calcium, iron and bromine (K, Ca, Fe and Br, respectively) present in kiwifruit using the technique of fluorescence X-ray energy dispersive (EDXRF). Kiwifruit were peeled, washed and cut into slices and freeze-dried. After drying the sample was held digestion and subsequent reading of the same equipment in the X-ray fluorescence energy dispersive (EDXRF). The results indicated that the contents of potassium, calcium, iron and bromine are present in kiwifruit as expected when compared to Brazilian Table of Food Composition. (author)

  4. Visualizing the dental biofilm matrix by means of fluorescence lectin-binding analysis.

    Science.gov (United States)

    Tawakoli, Pune N; Neu, Thomas R; Busck, Mette M; Kuhlicke, Ute; Schramm, Andreas; Attin, Thomas; Wiedemeier, Daniel B; Schlafer, Sebastian

    2017-01-01

    The extracellular matrix is a poorly studied, yet important component of dental biofilms. Fluorescence lectin-binding analysis (FLBA) is a powerful tool to characterize glycoconjugates in the biofilm matrix. This study aimed to systematically investigate the ability of 75 fluorescently labeled lectins to visualize and quantify extracellular glycoconjugates in dental biofilms. Lectin binding was screened on pooled supragingival biofilm samples collected from 76 subjects using confocal microscopy. FLBA was then performed with 10 selected lectins on biofilms grown in situ for 48 h in the absence of sucrose. For five lectins that proved particularly suitable, stained biovolumes were quantified and correlated to the bacterial composition of the biofilms. Additionally, combinations of up to three differently labeled lectins were tested. Of the 10 lectins, five bound particularly well in 48-h-biofilms: Aleuria aurantia (AAL), Calystega sepiem (Calsepa), Lycopersicon esculentum (LEA), Morniga-G (MNA-G) and Helix pomatia (HPA). No significant correlation between the binding of specific lectins and bacterial composition was found. Fluorescently labeled lectins enable the visualization of glycoconjugates in the dental biofilm matrix. The characterization and quantification of glycoconjugates in dental biofilms require a combination of several lectins. For 48-h-biofilms grown in absence of sucrose, AAL, Calsepa, HPA, LEA, and MNA-G are recommendable.

  5. Light emitting diode, photodiode-based fluorescence detection system for DNA analysis with microchip electrophoresis.

    Science.gov (United States)

    Hall, Gordon H; Glerum, D Moira; Backhouse, Christopher J

    2016-02-01

    Electrophoretic separation of fluorescently end-labeled DNA after a PCR serves as a gold standard in genetic diagnostics. Because of their size and cost, instruments for this type of analysis have had limited market uptake, particularly for point-of-care applications. This might be changed through a higher level of system integration and lower instrument costs that can be realized through the use of LEDs for excitation and photodiodes for detection--if they provide sufficient sensitivity. Here, we demonstrate an optimized microchip electrophoresis instrument using polymeric fluidic chips with fluorescence detection of end-labeled DNA with a LOD of 0.15 nM of Alexa Fluor 532. This represents orders of magnitude improvement over previously reported instruments of this type. We demonstrate the system with an electrophoretic separation of two PCR products and their respective primers. We believe that this is the first LED-induced fluorescence microchip electrophoresis system with photodiode-based detection that could be used for standard applications of PCR and electrophoresis. © 2015 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

  6. Fluorescent multiplex linkage analysis and carrier detection for Duchenne/Becker muscular dystrophy

    Energy Technology Data Exchange (ETDEWEB)

    Schwartz, L.S.; Hoffman, E.P. (Univ. of Pittsburgh Schoool of Medicine, Pittsburgh, PA (United States)); Tarleton, J. (Self Memorial Hospital, Greenwood, SC (United States)); Popovich, B. (Children' s Hosptial and Health Center, San Diego, CA (United States)); Seltzer, W.K. (Univ. of Colorado Health Sciences Center, Denver, CO (United States))

    1992-10-01

    The authors have developed a fast and accurate PCR-based linkage and carrier detection protocol for families of Duchenne muscular dystrophy (DMD)/Becker muscular dystrophy (BMD) patients with or without detectable deletions of the dystrophin gene, using fluorescent PCR products analyzed on an automated sequencer. When a deletion is found in the affected male DMD/BMD patient by standard multiplex PCR, fluorescently labeled primers specific for the deleted and nondeleted exon(s) are used to amplify the DNA of at-risk female relatives by using multiplex PCR at low cycle number (20 cycles). The products are then quantitatively analyzed on an automatic sequencer to determine whether they are heterozygous for the deletion and thus are carriers. As a confirmation of the deletion data, and in cases in which a deletion is not found in the proband, fluorescent multiplex PCR linkage is done by using four previously described polymorphic dinucleotide sequences. The four (CA)[sub n] repeats are located throughout the dystrophin gene, making the analysis highly informative and accurate. The authors present the successful application of this protocol in families who proved refractory to more traditional analyses. 22 refs., 3 figs.

  7. Portable total reflection x-ray fluorescence analysis in the identification of unknown laboratory hazards

    Energy Technology Data Exchange (ETDEWEB)

    Liu, Ying, E-mail: liu.ying.48r@st.kyoto-u.ac.jp; Imashuku, Susumu; Sasaki, Nobuharu; Ze, Long; Kawai, Jun [Department of Materials Science and Engineering, Kyoto University, Yoshida-Honmachi, Sakyo-ku, Kyoto 606-8501 (Japan); Takano, Shotaro; Sohrin, Yoshiki [Institute for Chemical Research, Kyoto University, Gokasho, Uji, Kyoto 611-0011 (Japan); Seki, Hiroko; Miyauchi, Hiroya [Kyoto Prefectural Technology Center for Small and Medium Enterprises, Chudojiminami machi, Shimogyo-ku, Kyoto 600-8813 (Japan)

    2014-05-15

    In this study, a portable total reflection x-ray fluorescence (TXRF) spectrometer was used to analyze unknown laboratory hazards that precipitated on exterior surfaces of cooling pipes and fume hood pipes in chemical laboratories. With the aim to examine the accuracy of TXRF analysis for the determination of elemental composition, analytical results were compared with those of wavelength-dispersive x-ray fluorescence spectrometry, scanning electron microscope and energy-dispersive x-ray spectrometry, energy-dispersive x-ray fluorescence spectrometry, inductively coupled plasma atomic emission spectrometry, x-ray diffraction spectrometry (XRD), and x-ray photoelectron spectroscopy (XPS). Detailed comparison of data confirmed that the TXRF method itself was not sufficient to determine all the elements (Z > 11) contained in the samples. In addition, results suggest that XRD should be combined with XPS in order to accurately determine compound composition. This study demonstrates that at least two analytical methods should be used in order to analyze the composition of unknown real samples.

  8. Synchrotron radiation based micro X-ray fluorescence analysis of the calibration samples used in surface sensitive total reflection and grazing emission X-ray fluorescence techniques

    Science.gov (United States)

    Kubala-Kukuś, A.; Banaś, D.; Pajek, M.; Szlachetko, J.; Jagodziński, P.; Susini, J.; Salomé, M.

    2013-12-01

    Total reflection X-ray fluorescence (TXRF) and grazing emission X-ray fluorescence (GEXRF) are surface sensitive techniques and can be used for detailed surface studies of different materials, including ultra-low concentration contamination or the lateral and depth distributions of elements. The calibration procedure typically used involves placing a micro-droplet (˜μl) of the standard solution onto a silicon wafer (or quartz backing). After evaporation of the solvent, the residual amount of elements is used as a reference standard. Knowledge of the distribution of residue material on the substrate surface is crucial for precise quantification. In the present work the investigation of the lateral distribution of elements in the multielemental calibrating samples, containing the 23 most commonly studied elements, by using the synchrotron radiation based micro X-ray fluorescence is presented. The goal of this project was the study of a uniformity of the elemental distributions and determination of the residual elements morphology depending on the temperature of the drying process. The X-ray images were compared with optical and SEM images. Paper presents in details the experimental setup, sample preparation procedures, measurements and results. In the analysis of the X-ray images of the sample dried in high temperature the censoring approach was applied improving the quality of statistical analysis. The information on the elements distribution in the calibrating samples can be useful for developing more accurate calibration procedures applied in quantitative analysis of surface sensitive TXRF and GEXRF techniques.

  9. Proteomic Analysis of Bovine Pregnancy-specific Serum Proteins by 2D Fluorescence Difference Gel Electrophoresis

    Directory of Open Access Journals (Sweden)

    Jae Eun Lee

    2015-06-01

    Full Text Available Two dimensional-fluorescence difference gel electrophoresis (2D DIGE is an emerging technique for comparative proteomics, which improves the reproducibility and reliability of differential protein expression analysis between samples. The purpose of this study was to investigate bovine pregnancy-specific proteins in the proteome between bovine pregnant and non-pregnant serum using DIGE technique. Serums of 2 pregnant Holstein dairy cattle at day 21 after artificial insemination and those of 2 non-pregnant were used in this study. The pre-electrophoretic labeling of pregnant and non-pregnant serum proteins were mixed with Cy3 and Cy5 fluorescent dyes, respectively, and an internal standard was labeled with Cy2. Labeled proteins with Cy2, Cy3, and Cy5 were separated together in a single gel, and then were detected by fluorescence image analyzer. The 2D DIGE method using fluorescence CyDye DIGE flour had higher sensitivity than conventional 2D gel electrophoresis, and showed reproducible results. Approximately 1,500 protein spots were detected by 2D DIGE. Several proteins showed a more than 1.5-fold up and down regulation between non-pregnant and pregnant serum proteins. The differentially expressed proteins were identified by MALDI-TOF mass spectrometer. A total 16 protein spots were detected to regulate differentially in the pregnant serum, among which 7 spots were up-regulated proteins such as conglutinin precursor, modified bovine fibrinogen and IgG1, and 6 spots were down-regulated proteins such as hemoglobin, complement component 3, bovine fibrinogen and IgG2a three spots were not identified. The identified proteins demonstrate that early pregnant bovine serum may have several pregnancy-specific proteins, and these could be a valuable information for the development of pregnancy-diagnostic markers in early pregnancy bovine serum.

  10. Proteomic Analysis of Bovine Pregnancy-specific Serum Proteins by 2D Fluorescence Difference Gel Electrophoresis

    Science.gov (United States)

    Lee, Jae Eun; Lee, Jae Young; Kim, Hong Rye; Shin, Hyun Young; Lin, Tao; Jin, Dong Il

    2015-01-01

    Two dimensional-fluorescence difference gel electrophoresis (2D DIGE) is an emerging technique for comparative proteomics, which improves the reproducibility and reliability of differential protein expression analysis between samples. The purpose of this study was to investigate bovine pregnancy-specific proteins in the proteome between bovine pregnant and non-pregnant serum using DIGE technique. Serums of 2 pregnant Holstein dairy cattle at day 21 after artificial insemination and those of 2 non-pregnant were used in this study. The pre-electrophoretic labeling of pregnant and non-pregnant serum proteins were mixed with Cy3 and Cy5 fluorescent dyes, respectively, and an internal standard was labeled with Cy2. Labeled proteins with Cy2, Cy3, and Cy5 were separated together in a single gel, and then were detected by fluorescence image analyzer. The 2D DIGE method using fluorescence CyDye DIGE flour had higher sensitivity than conventional 2D gel electrophoresis, and showed reproducible results. Approximately 1,500 protein spots were detected by 2D DIGE. Several proteins showed a more than 1.5-fold up and down regulation between non-pregnant and pregnant serum proteins. The differentially expressed proteins were identified by MALDI-TOF mass spectrometer. A total 16 protein spots were detected to regulate differentially in the pregnant serum, among which 7 spots were up-regulated proteins such as conglutinin precursor, modified bovine fibrinogen and IgG1, and 6 spots were down-regulated proteins such as hemoglobin, complement component 3, bovine fibrinogen and IgG2a three spots were not identified. The identified proteins demonstrate that early pregnant bovine serum may have several pregnancy-specific proteins, and these could be a valuable information for the development of pregnancy-diagnostic markers in early pregnancy bovine serum. PMID:25925056

  11. Two-Pronged Approach to Overcome Spectroscopically Interfering Organic Compounds with Isotopic Water Analysis

    Science.gov (United States)

    Saad, Nabil; Hsiao, Gregor; Chapellet-Volpini, London; Vu, Danthu

    2013-04-01

    The ability to measure the stable isotopes of hydrogen (dD) and oxygen (d18O) has become much more accessible with the advent of Cavity Ring-Down Spectroscopy (CRDS) laser optical devices. These small and inexpensive analyzers have led to a significant increase in the acquisition of data from a variety of studies in the fields of groundwater, watershed, and other water source applications. However for some samples, such as those linked to fracking, mining, and other activities where higher than normal concentrations of organic materials are to be found, optical spectroscopy may require an adaptation from current methodologies in order to ensure data confidence. That is because CRDS is able to measure all the components within a spectral region - which will include the spectral characteristics of the isotopologues of water as well as the available features from interfering organic molecules. Although, at the first level, the information from the organic material provides spectral overlaps that can perturb the isotopic ratios, a more thorough review shows that these features are a source of information that will be inherently useful. This presentation will examine the approaches developed within the past year to allow for more accurate analyses of such samples by optical methods. The first approach uses an advanced spectroscopic model to flag the presence of organic material in the sample. Signals from known interfering compounds (i.e., alcohols, ketones, aldehydes, short-chain hydrocarbons, etc.) are incorporated into the overall fit of the measured spectra used to calculate the concentration of the individual isotopes. The second approach uses physical treatment of the sample to break down the organic molecules into non-interfering species. The vaporized liquid or solid sample travels through a cartridge packed with an oxidation catalyst. The interfering organic molecules will undergo high temperature oxidation using O2 present in the air carrier gas stream prior

  12. Development and analysis of spectroscopic learning tools and the light and spectroscopy concept inventory for introductory college astronomy

    Science.gov (United States)

    Bardar, Erin M.

    Electromagnetic radiation is the fundamental carrier of astronomical information. Spectral features serve as the fingerprints of the universe, revealing many important properties of objects in the cosmos such as temperature, elemental compositions, and relative motion. Because of its importance to astronomical research, the nature of light and the electromagnetic spectrum is by far the most universally covered topic in astronomy education. Yet, to the surprise and disappointment of instructors, many students struggle to understand underlying fundamental concepts related to light and spectroscopic phenomena. This dissertation describes research into introductory college astronomy students' understanding of light and spectroscopy concepts, through the development and analysis of both instructional materials and an assessment instrument. The purpose of this research was two-fold: (1) to develop a novel suite of spectroscopic learning tools that enhance student understanding of light and spectroscopy and (2) to design and validate a Light and Spectroscopy Concept Inventory (LSCI) with the sensitivity to distinguish the relative effectiveness of various teaching interventions within the context of introductory college astronomy. Through a systematic investigation that included multiple rounds of clinical interviews, open-ended written surveys, and multiple-choice testing, introductory college astronomy students' commonly held misconceptions and reasoning difficulties were explored for concepts relating to: (1) The nature of the electromagnetic spectrum, including the interrelationships of wavelength, frequency, energy, and speed; (2) interpretation of Doppler shift; (3) properties of blackbody radiation; and (4) the connection between spectral features and underlying physical processes. These difficulties guided the development of instructional materials including six unique "homelab" exercises, a binocular spectrometer, a spectral analysis software tool, and the 26

  13. Chemical analysis of copper and gold ores from Papua New Guinea (PNG) by means of X-ray fluorescence analysis

    International Nuclear Information System (INIS)

    Sugiyama, Kazumasa; Waseda, Yoshio; Pangum, L.S.; Witney, J.Y.

    1995-01-01

    X-ray fluorescence analysis (XRF) has been made for determining the contents of copper and gold in ores from PNG mines. An internal standard method of Cu Kα/Er Lβ 1 was used for the analysis of the common copper porphyry samples. The results clearly indicate that this technique is quite effective for analyzing any copper ores with complicated matrix elements. On the other hand, an addition method of the diluted Au solution was applied to gold ores. The results of the present XRF analysis were found to reasonably agree with those obtained by the inductively coupled plasma (ICP) technique. (author)

  14. Spectroscopic Analysis to Characterize Finishing Treatments of Ancient Bowed String Instruments.

    Science.gov (United States)

    Fiocco, Giacomo; Rovetta, Tommaso; Gulmini, Monica; Piccirillo, Anna; Licchelli, Maurizio; Malagodi, Marco

    2017-11-01

    Historical bowed string instruments exhibit acoustic features and aesthetic appeal that are still considered inimitable. These characteristics seem to be in large part determined by the materials used in the ground and varnishing treatments after the assembly of the instrument. These finishing processes were kept secret by the violinmakers and the traditional methods were handed down orally from master craftsmen to apprentices. Today, the methods of the past can represent a secret to be revealed through scientific investigations. The "Cremonese" methods used in the 17th and 18th centuries were lost as the last Great Masters from the Amati, Guarneri, and Stradivari families passed away. In this study, we had the chance of combining noninvasive and microinvasive techniques on six fragments of historical musical instruments. The fragments were detached from different instruments during extraordinary maintenance and restoration treatments, which involved the substitution of severely damaged structural parts like top plates, back plates, or ribs. Therefore, the fragments can offer to the scientists a valuable overview on the materials and techniques used by the violinmakers. The results obtained by portable X-ray fluorescence, optical microscopy, scanning electron microscopy coupled with energy dispersive X-ray spectrometry, and Fourier transform infrared microscopy allowed us to: (1) determine the stratigraphy of six instruments; (2) obtain new information about the materials involved in the finishing processes employed in Cremona; and (3) elucidate the technological relationship among the procedures adopted in the violin making workshops during the considered period.

  15. Proton induced X-Ray fluorescence study as a tool trace element analysis

    International Nuclear Information System (INIS)

    El-Kady, Ahmed A.

    1978-01-01

    Usefulness and limitations of trace elemental analysis by high energy charged particles and photon induced X-ray have been discussed. Comparison with the well established neutron activation analysis technique is also given. Back-ground radiation due to bremsstrahlung from secondary electrons and due to charged particle bremsstrahlung have been reviewed for different projectiles. The sensitivity of elemental analysis by proton induced X-ray fluorescence have been examined by measuring the characteristic X-ray emission cross section for K and L transitions of many elements and for different proton energies and compared with theroretical values. The discussion given in this report show that with suitable proton generator and a high resolution X-ray detector, proton X-ray fluorescence technique is capable of analyzing many elements simultaneously at the part per million level and offers a rapid and reliable method for trace element analysis. Data on water, blood and tissue samples given in this report are few examples of many possible applications

  16. Characterization of Organosolv Lignins using Thermal and FT-IR Spectroscopic Analysis

    Science.gov (United States)

    Rhea J. Sammons; David P. Harper; Nicole Labbe; Joseph J. Bozell; Thomas Elder; Timothy G. Rials

    2013-01-01

    A group of biomass-derived lignins isolated using organosolv fractionation was characterized by FT-IR spectral and thermal property analysis coupled with multivariate analysis. The principal component analysis indicated that there were significant variations between the hardwood, softwood, and grass lignins due to the differences in syringyl and guaiacyl units as well...

  17. Spectroscopic profiling and computational study of the binding of tschimgine: A natural monoterpene derivative, with calf thymus DNA

    Science.gov (United States)

    Khajeh, Masoumeh Ashrafi; Dehghan, Gholamreza; Dastmalchi, Siavoush; Shaghaghi, Masoomeh; Iranshahi, Mehrdad

    2018-03-01

    DNA is a major target for a number of anticancer substances. Interaction studies between small molecules and DNA are essential for rational drug designing to influence main biological processes and also introducing new probes for the assay of DNA. Tschimgine (TMG) is a monoterpene derivative with anticancer properties. In the present study we tried to elucidate the interaction of TMG with calf thymus DNA (CT-DNA) using different spectroscopic methods. UV-visible absorption spectrophotometry, fluorescence and circular dichroism (CD) spectroscopies as well as molecular docking study revealed formation of complex between TMG and CT-DNA. Binding constant (Kb) between TMG and DNA was 2.27 × 104 M- 1, that is comparable to groove binding agents. The fluorescence spectroscopic data revealed that the quenching mechanism of fluorescence of TMG by CT-DNA is static quenching. Thermodynamic parameters (ΔH analysis, viscosity measurements and molecular docking.

  18. Motion Analysis of Live Objects by Super-Resolution Fluorescence Microscopy

    Directory of Open Access Journals (Sweden)

    Chunyan Yao

    2012-01-01

    Full Text Available Motion analysis plays an important role in studing activities or behaviors of live objects in medicine, biotechnology, chemistry, physics, spectroscopy, nanotechnology, enzymology, and biological engineering. This paper briefly reviews the developments in this area mostly in the recent three years, especially for cellular analysis in fluorescence microscopy. The topic has received much attention with the increasing demands in biomedical applications. The tasks of motion analysis include detection and tracking of objects, as well as analysis of motion behavior, living activity, events, motion statistics, and so forth. In the last decades, hundreds of papers have been published in this research topic. They cover a wide area, such as investigation of cell, cancer, virus, sperm, microbe, karyogram, and so forth. These contributions are summarized in this review. Developed methods and practical examples are also introduced. The review is useful to people in the related field for easy referral of the state of the art.

  19. The studies of post-medieval glass by multivariate and X-ray fluorescence analysis

    International Nuclear Information System (INIS)

    Kierzek, J.; Kunicki-Goldfinger, J.

    2002-01-01

    Multivariate statistical analysis of the results obtained by energy dispersive X-ray fluorescence analysis has been used in the study of baroque vessel glasses originated from central Europe. X-ray spectrometry can be applied as a completely non-destructive, non-sampling and multi-element method. It is very useful in the studies of valuable historical artefacts. For the last years, multivariate statistical analysis has been developed as an important tool for the archaeometric purposes. Cluster, principal component and discriminant analysis were applied for the classification of the examined objects. The obtained results show that these statistical tools are very useful and complementary in the studies of historical objects. (author)

  20. Quantitative X ray analysis system. User's manual and guide to X ray fluorescence technique

    International Nuclear Information System (INIS)

    2009-01-01

    This guide covers trimmed and re-arranged version 3.6 of the Quantitative X ray Analysis System (QXAS) software package that includes the most frequently used methods of quantitative analysis. QXAS is a comprehensive quantitative analysis package that has been developed by the IAEA through research and technical contracts. Additional development has also been carried out in the IAEA Laboratories in Seibersdorf where QXAS was extensively tested. New in this version of the manual are the descriptions of the Voigt-profile peak fitting, the backscatter fundamental parameters' and emission-transmission methods of chemical composition analysis, an expanded chapter on the X ray fluorescence physics, and completely revised and increased number of practical examples of utilization of the QXAS software package. The analytical data accompanying this manual were collected in the IAEA Seibersdorf Laboratories in the years 2006/2007

  1. Instrumental aspects of tube-excited energy-dispersive X-ray fluorescence analysis

    International Nuclear Information System (INIS)

    Adams, F.; Nullens, H.; Espen, P. van

    1983-01-01

    Energy-dispersive X-ray fluorescence spectrometry is an attractive and widely used method for sensitive multi-element analysis. The method suffers from the extreme density of spectral components in a rather limited energy range which implies the need for computer based spectrum analysis. The method of iterative least squares analysis is the most powerful tool for this. It requires a systematic and accurate description of the spectral features. Other important necessities for accurate analysis are the calibration of the spectrometer and the correction for matrix absorption effects in the sample; they can be calculated from available physical constants. Ours and similar procedures prove that semi-automatic analyses are possible with an accuracy of the order of 5%. (author)

  2. flippant-An R package for the automated analysis of fluorescence-based scramblase assays.

    Science.gov (United States)

    Cotton, Richard J; Ploier, Birgit; Goren, Michael A; Menon, Anant K; Graumann, Johannes

    2017-03-03

    The lipid scrambling activity of protein extracts and purified scramblases is typically measured using a fluorescence-based assay. While the assay has yielded insight into the scramblase activity in crude membrane preparations, functional validation of candidate scramblases, stoichiometry of scramblase complexes as well as ATP-dependence of flippases, data analysis in its context has remained a task involving many manual steps. With the extension package "flippant" to R, a free software environment for statistical computing and graphics, we introduce an integrated solution for the analysis and publication-grade graphical presentation of dithionite scramblase assays and demonstrate its utility in revisiting an originally manual analysis from the publication record, closely reproducing the reported results. "flippant" allows for quick, reproducible data analysis of scramblase activity assays and provides a platform for review, dissemination and extension of the strategies it employs.

  3. X-ray fluorescence analysis of archaeological finds and art objects: Recognizing gold and gilding

    International Nuclear Information System (INIS)

    Trojek, Tomáš; Hložek, Martin

    2012-01-01

    Many cultural heritage objects were gilded in the past, and nowadays they can be found in archeological excavations or in historical buildings dating back to the Middle Ages, or from the modern period. Old gilded artifacts have been studied using X-ray fluorescence analysis and 2D microanalysis. Several techniques that enable the user to distinguish gold and gilded objects are described and then applied to investigate artifacts. These techniques differ in instrumentation, data analysis and numbers of measurements. The application of Monte Carlo calculation to a quantitative analysis of gilded objects is also introduced. - Highlights: ► Three techniques of gilding identification with XRF analysis are proposed. ► These techniques are applied to gold and gilded art and archeological objects. ► Composition of a substrate material is determined by a Monte Carlo simulation.

  4. Preparation of cesium targets for gamma-spectroscopic studies

    Science.gov (United States)

    Bhattacharyya, S.; Basu, S. K.; Chanda, S.; Deb, P.; Eqbal, Md; Kundu, S.; Joseph, D.

    2000-11-01

    A procedure to prepare monoisotopic cesium compound targets for gamma-spectroscopic experiments is described. Using this procedure, uniform targets up to thicknesses of 0.6-1.2 mg/cm 2 were prepared and used for in-beam spectroscopic studies. The purity of the target was tested by energy dispersive X-ray fluorescence (EDXRF) measurements.

  5. Pt-CdTe Detectors Spectroscopic Performances and RBS and XRF Interface Composition Analysis

    Science.gov (United States)

    Raulo, A.; Sowinska, M.; Hennard, G.; Campajola, L.; Marano, D.; Paternoster, G.; Perillo, E.

    2012-08-01

    X- and Gamma-Ray spectroscopy measurements have been performed on differently prepared CdTe samples (as-grown or annealed, different surface treatments, etc.) with Pt electrodes deposited by electroless technique in order to extract the typical figures of merit of the material and the detectors. Moreover, Rutherford Backscattering Spectrometry (RBS) using 8 MeV 7Li+++ ions and X-Ray Fluorescence (XRF) using a Pd-anode X-Ray generator were performed to characterize the crystal surface as well as the semiconductor-electrode interface. The thickness, the stoichiometry and the concentration profiles of platinum, cadmium and tellurium present at the surface layers were determined. The distribution of Cd deficiency at the interface layers was profiled using simulations and showed complex profiles in the samples, that can greatly affect the electrical quality of the detectors. In addition, resistivity and mu-tau product mapping and electrical measurements have been performed for material characterization. The aim of this work is to understand and improve the structure of the material-electrode interface; in particular, to understand the effect of the annealing process on the fabrication of the contacts and, at the end, on the performances of the detectors. For this reason a large number of detectors have been produced applying various chemical surface treatments on as-grown and annealed material, in order to determine the best routine way to fabricate high-quality X- and Gamma-ray detectors to be used both as large size planar detectors and as elements of imaging systems in medical or industrial applications.

  6. Fluorescence method for enzyme analysis which couples aromatic amines with aromatic aldehydes

    Science.gov (United States)

    Smith, R.E.; Dolbeare, F.A.

    1980-10-21

    Analysis of proteinases is accomplished using conventional amino acid containing aromatic amine substrates. Aromatic amines such as 4-methoxy-2-naphthylamine (4M2NA), 2-naphthylamine, aminoisophthalic acid dimethyl ester, p-nitroaniline, 4-methoxy-1-aminofluorene and coumarin derivatives resulting from enzymatic hydrolysis of the substrate couples with aromatic aldehydes such as 5-nitrosalicylaldehyde (5-NSA), benzaldehyde and p-nitrobenzaldehyde to produce Schiff-base complexes which are water insoluble. Certain Schiff-base complexes produce a shift from blue to orange-red (visible) fluorescence. Such complexes are useful in the assay of enzymes. No Drawings

  7. Detection of orange juice frauds using front-face fluorescence spectroscopy and Independent Components Analysis.

    Science.gov (United States)

    Ammari, Faten; Redjdal, Lamia; Rutledge, Douglas N

    2015-02-01

    The aim of this study was to find simple objective analytical methods to assess the adulteration of orange juice by grapefruit juice. The adulterations by addition of grapefruit juice were studied by 3D-front-face fluorescence spectroscopy followed by Independent Components Analysis (ICA) and by classical methods such as free radical scavenging activity and total flavonoid content. The results of this study clearly indicate that frauds by adding grapefruit juice to orange juice can be detected at percentages as low as 1%. Copyright © 2014 Elsevier Ltd. All rights reserved.

  8. Analysis of zirconia and alumina products and raw materials by X-ray fluorescence spectrometry

    International Nuclear Information System (INIS)

    Boix, A.; Draignaud, M.; Debras-Guedon, J.

    1975-01-01

    An X-ray fluorescence spectrometric method of analysis for various raw materials and materials based on zirconia, alumina and silica was developed. The measurements were made on beads made from the sample and a borax based flux, in the proportions 1:10. A repeatability test allowed the relative standard deviation to be estimated for the three main constituents: SiO 2 , Al 2 O 3 , ZrO 2 : it is at the level of 1%. The element analyzed are: Si, Al, Fe, Ti, Ca, Hf and Zr [fr

  9. The analysis, by a fusion procedure and X-ray-fluorescence spectrometry, of silicates and slags

    International Nuclear Information System (INIS)

    Jacobs, J.J.; Balaes, A.M.E.

    1980-01-01

    A glass-disc fusion method is described for the analysis, by X-ray-fluorescence spectrometry, of slags and silicate materials. The data are corrected for detector dead time and short-term instrumental drift. Corrections are made for matrix variations by use of the Lachange-Traill mathematical model, and the results are processed on a mini-computer, an iterative procedure being used in the solving of the simultaneous equations. As the alpha-correction coefficients of the Lachange-Traill model are not truly constant, a modified version of the model is proposed [af

  10. Gut fluorescence analysis of barnacle larvae: An approach to quantify the ingested food

    Digital Repository Service at National Institute of Oceanography (India)

    Gaonkar, C.A.; Anil, A.C.

    limitations in the method such as it can detect only the ingested phytoplankton and there is also a possibility of pigment destruction in the guts to non-fluorescent compounds (Conover et al., 1986; Head, 1992; Head and Harris, 1996; Mc...Leroy-Etheridge and McManus, 1999; Pasternak, 1994 and the references therein). Analysis of pigments in the guts of grazers has become a popular tool for the last few decades for measuring the feeding activity of planktonic herbivores (Nemoto, 1968; Mackas and Bohrer...

  11. Elemental analysis of granite by instrumental neutron activation analysis (INAA) and X-ray fluorescence analysis (XRF).

    Science.gov (United States)

    El-Taher, A

    2012-01-01

    The instrumental neutron activation analysis technique (INAA) was used for qualitative and quantitative analysis of granite samples collected from four locations in the Aswan area in South Egypt. The samples were prepared together with their standards and simultaneously irradiated in a neutron flux of 7×10(11)n/cm(2)s in the TRIGA Mainz research reactor. Gamma-ray spectra from an hyper-pure germanium detector were analyzed. The present study provides the basic data of elemental concentrations of granite rocks. The following elements have been determined Na, Mg, K, Fe, Mn, Sc, Cr, Ti, Co, Zn, Ga, Rb, Zr, Nb, Sn, Ba, Cs, La, Ce, Nd, Sm, Eu, Yb, Lu, Hf, Ta, Th and U. The X-ray fluorescence (XRF) was used for comparison and to detect elements, which can be detected only by XRF such as F, S, Cl, Co, Cu, Mo, Ni, Pb, Se and V. The data presented here are our contribution to understanding the elemental composition of the granite rocks. Because there are no existing databases for the elemental analysis of granite, our results are a start to establishing a database for the Egyptian granite. It is hoped that the data presented here will be useful to those dealing with geochemistry, granite chemistry and related fields. Copyright © 2011 Elsevier Ltd. All rights reserved.

  12. Multi-elemental analysis of marine sediments of Sorsogon Bay using x-ray fluorescence spectroscopy

    International Nuclear Information System (INIS)

    Gonzales, Ralph Roly A.; Quirit, Leni L.; Rosales, Colleen Marciel F.; Pabroa, Preciosa Corazon B.; Sta Maria, Efren J.

    2011-01-01

    Metal composition and nutrient loadings of our bodies of water, when uncontrolled, may cause harmful bacterial contamination and pose threats in aquatic and human life. Toxic and trace element inputs in Sorsogon Bay sediments were determined using nuclear analytical techniques, more specifically, x-ray fluorescence spectrometry, in this study. Pre-treated marine sediment samples from Sorsogon Bay were homogenized using SPEX # 8000 mixer/mill and agate mortar and pestle, pelletized into 31-mm flat discs using SPEX 3630 X-Press and analyzed using PAN Analytical Epsilon 5 EDX X-ray Fluorescence Spectrometer with the emission and transmission method using silver and germanium secondary targets. Spectrum fitting performed using AXIL (Analysis of X-ray Spectra by Iterative Least-Squares Fitting), a subprogram in Quantitative X-ray Analysis System developed by the International Atomic Energy Agency and Quantitative Analysis of Environmental Samples program, was used for quantification of results. Results indicate generally moderate to high metal enrichment, specifically manganese, lead, cadmium, zinc and copper. Mercury and iron level enrichment are found to be low, marking an improvement from previous studies indicating high enrichment of these metals. (author)

  13. Heavy metals analysis in fishes by the X-ray fluorescence method

    International Nuclear Information System (INIS)

    Perez Novara, Ana Ma.

    1986-04-01

    Among the sources of contamination in human beings we find ingestion of heavy metals. As it is common practice to pour industrial wastes in waters where fishes feed, some toxic elements present in water may pass to human beings through ingestion. It is therefore important to determine the concentrations of heavy metals present in fishes, mainly in those living in waters close to industrial zones or villages. Concentrations of heavy metals in tissue of fishes amount to ppm, hence making necessary the use of very sensitive analytical techniques which do not require a too complex preparation of the sample in order to avoid the loss or contamination of interesting elements of analysis while handling them, thus falsifying the results. The X-Ray Fluorescence method covers these requirements and is not destructive nor multi-elemental. The development of the technique of element analysis in fishes by X-Ray Fluorescence comprised several aspects. from sampling and storage to quantification, specially stressing the preparation of samples. The work was carried out with a Si-Li detector/monitor for solid state and associated electronic equipment. Cd-109 and Pu-238 sources were used to produce excitation, detection limits near 1 ppm were obtained in the majority of elements the technique attained for the analysis of this kind of samples fulfills the celerity, precision, accuracy, and sensitivity requirements. (author)

  14. Viability assessment of Ascaris suum eggs stained with fluorescent dyes using digital colorimetric analysis.

    Science.gov (United States)

    Włodarczyk, Magdalena; Zdybel, Jolanta; Próchniak, Marek; Osiński, Zbigniew; Karamon, Jacek; Kłapeć, Teresa; Cencek, Tomasz

    2017-07-01

    The aim of the study was to develop a method for the colorimetric evaluation of nematode eggs using appropriate instruments. The materials for the study were live and dead (inactivated) eggs of the Ascaris suum. Viability of the eggs was assessed using four different kits for fluorescent staining (for each technique, a series of photos were taken). Images of stained eggs were analysed using graphic software with RGB (red-green-blue) function. The viability of the eggs was assessed according to the relative positions of the distributions of colour intensities of live or dead eggs - distributions area's overlap index (DAOI), and distributions area's separation index (DASI) were calculated. Computer analysis of the intensity of green colour was not satisfactory. However, analysis of images in the spectrum of red colour proved useful for the effective differentiation between live or dead eggs. The best parameters were observed using the Annexin V FITC Apoptosis Detection Kit (DASI = 41 and 67). The investigation confirmed the usefulness of fluorescent dyes used in conjunction with digital analysis for the assessment of the viability of A. suum eggs. The use of computer software allowed a better objectivity of the assessment, especially in the case of doubtful staining. Copyright © 2017 Elsevier Inc. All rights reserved.

  15. Determination of minor and trace elements in kidney stones by x-ray fluorescence analysis

    Science.gov (United States)

    Srivastava, Anjali; Heisinger, Brianne J.; Sinha, Vaibhav; Lee, Hyong-Koo; Liu, Xin; Qu, Mingliang; Duan, Xinhui; Leng, Shuai; McCollough, Cynthia H.

    2014-03-01

    The determination of accurate material composition of a kidney stone is crucial for understanding the formation of the kidney stone as well as for preventive therapeutic strategies. Radiations probing instrumental activation analysis techniques are excellent tools for identification of involved materials present in the kidney stone. In particular, x-ray fluorescence (XRF) can be very useful for the determination of minor and trace materials in the kidney stone. The X-ray fluorescence measurements were performed at the Radiation Measurements and Spectroscopy Laboratory (RMSL) of department of nuclear engineering of Missouri University of Science and Technology and different kidney stones were acquired from the Mayo Clinic, Rochester, Minnesota. Presently, experimental studies in conjunction with analytical techniques were used to determine the exact composition of the kidney stone. A new type of experimental set-up was developed and utilized for XRF analysis of the kidney stone. The correlation of applied radiation source intensity, emission of X-ray spectrum from involving elements and absorption coefficient characteristics were analyzed. To verify the experimental results with analytical calculation, several sets of kidney stones were analyzed using XRF technique. The elements which were identified from this techniques are Silver (Ag), Arsenic (As), Bromine (Br), Chromium (Cr), Copper (Cu), Gallium (Ga), Germanium (Ge), Molybdenum (Mo), Niobium (Nb), Rubidium (Rb), Selenium (Se), Strontium (Sr), Yttrium (Y), Zirconium (Zr). This paper presents a new approach for exact detection of accurate material composition of kidney stone materials using XRF instrumental activation analysis technique.

  16. Role of optical spectroscopic methods in neuro-oncological sciences.

    Science.gov (United States)

    Bahreini, Maryam

    2015-01-01

    In the surgical treatment of malignant tumors, it is crucial to characterize the tumor as precisely as possible. The determination of the exact tumor location as well as the analysis of its properties is very important in order to obtain an accurate diagnosis as early as possible. In neurosurgical applications, the optical, non-invasive and in situ techniques allow for the label-free analysis of tissue, which is helpful in neuropathology. In the past decades, optical spectroscopic methods have been investigated drastically in the management of cancer. In the optical spectroscopic techniques, tissue interrogate with sources of light which are ranged from the ultraviolet to the infrared wavelength in the spectrum. The information accumulation of light can be in a reflection which is named reflectance spectroscopy; or interactions with tissue at different wavelengths which are called fluorescence and Raman spectroscopy. This review paper introduces the optical spectroscopic methods which are used to characterize brain tumors (neuro-oncology). Based on biochemical information obtained from these spectroscopic methods, it is possible to identify tumor from normal brain tissues, to indicate tumor margins, the borders towards normal brain tissue and infiltrating gliomas, to distinguish radiation damage of tissues, to detect particular central nervous system (CNS) structures to identify cell types using particular neurotransmitters, to detect cells or drugs which are optically labeled within therapeutic intermediations and to estimate the viability of tissue and the prediction of apoptosis beginning in vitro and in vivo. The label-free, optical biochemical spectroscopic methods can provide clinically relevant information and need to be further exploited to develop a safe and easy-to-use technology for in situ diagnosis of malignant tumors.

  17. Semi-quantitative analysis on the content of berberine hydrochloride in compound berberine tablets with the fluorescence spectral imaging method

    Directory of Open Access Journals (Sweden)

    Lan Liang

    2016-03-01

    Full Text Available The content of berberine hydrochloride (BH in compound berberine tablets (CBTs is subject to strict requirements. Its content is usually measured based on chemical analysis. In this paper, the fluorescence spectral imaging method was used to study the relative content of BH from a physics perspective. By comparing the relative fluorescence intensity of self-made CBTs with different mass percentages of BH, a linear positive relationship was observed between the BH content and the relative fluorescence intensity, and accordingly the quality of CBTs of different brands was evaluated. The results indicate that the fluorescence spectral imaging method can be a simple, fast and nondestructive semi-quantitative analysis method to determine the content of BH in CBTs, and this method has great potential in the quality control of CBTs.

  18. Characterization of DOM adsorption of CNTs by using excitation-emission matrix fluorescence spectroscopy and multiway analysis.

    Science.gov (United States)

    Peng, Mingguo; Li, Huajie; Li, Dongdong; Du, Erdeng; Li, Zhihong

    2017-06-01

    Carbon nanotubes (CNTs) were utilized to adsorb DOM in micro-polluted water. The characteristics of DOM adsorption on CNTs were investigated based on UV 254 , TOC, and fluorescence spectrum measurements. Based on PARAFAC (parallel factor) analysis, four fluorescent components were extracted, including one protein-like component (C4) and three humic acid-like components (C1, C2, and C3). The adsorption isotherms, kinetics, and thermodynamics of DOM adsorption on CNTs were further investigated. A Freundlich isotherm model fit the adsorption data well with high values of correlation. As a type of macro-porous and meso-porous adsorbent, CNTs preferably adsorb humic acid-like substances rather than protein-like substances. The increasing temperature will speed up the adsorption process. The self-organizing map (SOM) analysis further explains the fluorescent properties of water samples. The results provide a new insight into the adsorption behaviour of DOM fluorescent components on CNTs.

  19. Quantitative fluorescence loss in photobleaching for analysis of protein transport and aggregation

    Directory of Open Access Journals (Sweden)

    Wüstner Daniel

    2012-11-01

    Full Text Available Abstract Background Fluorescence loss in photobleaching (FLIP is a widely used imaging technique, which provides information about protein dynamics in various cellular regions. In FLIP, a small cellular region is repeatedly illuminated by an intense laser pulse, while images are taken with reduced laser power with a time lag between the bleaches. Despite its popularity, tools are lacking for quantitative analysis of FLIP experiments. Typically, the user defines regions of interest (ROIs for further analysis which is subjective and does not allow for comparing different cells and experimental settings. Results We present two complementary methods to detect and quantify protein transport and aggregation in living cells from FLIP image series. In the first approach, a stretched exponential (StrExp function is fitted to fluorescence loss (FL inside and outside the bleached region. We show by reaction–diffusion simulations, that the StrExp function can describe both, binding/barrier–limited and diffusion-limited FL kinetics. By pixel-wise regression of that function to FL kinetics of enhanced green fluorescent protein (eGFP, we determined in a user-unbiased manner from which cellular regions eGFP can be replenished in the bleached area. Spatial variation in the parameters calculated from the StrExp function allow for detecting diffusion barriers for eGFP in the nucleus and cytoplasm of living cells. Polyglutamine (polyQ disease proteins like mutant huntingtin (mtHtt can form large aggregates called inclusion bodies (IB’s. The second method combines single particle tracking with multi-compartment modelling of FL kinetics in moving IB’s to determine exchange rates of eGFP-tagged mtHtt protein (eGFP-mtHtt between aggregates and the cytoplasm. This method is self-calibrating since it relates the FL inside and outside the bleached regions. It makes it therefore possible to compare release kinetics of eGFP-mtHtt between different cells and

  20. Excitation induced spectroscopic study and quenching effect in cerium samarium codoped lithium aluminoborate glasses

    Energy Technology Data Exchange (ETDEWEB)

    Kaur, Parvinder; Kaur, Simranpreet [Department of Physics, Guru Nanak Dev University, Amritsar 143005 (India); Singh, Gurinder Pal [Department of Physics, Khalsa College, Amritsar 143002 (India); Arora, Deepawali; Kumar, Sunil [Department of Physics, Guru Nanak Dev University, Amritsar 143005 (India); Singh, D.P., E-mail: dpsinghdr@yahoo.com [Department of Physics, Guru Nanak Dev University, Amritsar 143005 (India)

    2016-08-15

    Lithium aluminium borate host has been codoped with cerium and samarium to prepare glass by conventional melt quench technique. Their structural and spectroscopic investigation has been carried out using XRD, FTIR and density measurements. The UV‐Vis absorption spectra and fluorescence spectra (λ{sub exc}.=380 nm and 400 nm) have been studied for spectroscopic analysis. The amorphous nature of the prepared samples is shown by XRD. The density is increasing with addition of cerium at the expense of aluminium, keeping other components constant. FTIR study also shows the presence of compact and stable tetrahedral BO{sub 4} units thus supporting the density results. The UV‐ Vis absorption spectra show a shift of optical absorption edge towards longer wavelength along with an increase in intensity of peaks with rising samarium concentration. The fluorescence spectra show a blue shift and subsequent suppression of cerium peaks with addition of samarium.

  1. Investigation on the interaction of pyrene with bovine serum albumin using spectroscopic methods.

    Science.gov (United States)

    Xu, Chengbin; Gu, Jiali; Ma, Xiping; Dong, Tian; Meng, Xuelian

    2014-05-05

    This paper was designed to investigate the interaction of pyrene with bovine serum albumin (BSA) under physiological condition by spectroscopic methods. Spectroscopic analysis of the emission quenching revealed that the quenching mechanism of BSA by pyrene was static. The binding sites and constants of pyrene-BSA complex were observed to be 1.20 and 2.63×10(6) L mol(-1) at 298 K, respectively. The enthalpy change (ΔH) and entropy change (ΔS) revealed that van der Waals forces and hydrogen bonds stabilized the pyrene-BSA complex. Energy transfer from tryptophan to pyrene occurred by a FRET (fluorescence resonance energy transfer) mechanism, and the distance (r=2.72 nm) had been determined. The results of synchronous, three-dimensional fluorescence, and circular dichroism spectra showed that the pyrene induced conformational changes of BSA. Copyright © 2014 Elsevier B.V. All rights reserved.

  2. Methods for the analysis of complex fluorescence decays: sum of Becquerel functions versus sum of exponentials

    International Nuclear Information System (INIS)

    Menezes, Filipe; Fedorov, Alexander; Baleizão, Carlos; Berberan-Santos, Mário N; Valeur, Bernard

    2013-01-01

    Ensemble fluorescence decays are usually analyzed with a sum of exponentials. However, broad continuous distributions of lifetimes, either unimodal or multimodal, occur in many situations. A simple and flexible fitting function for these cases that encompasses the exponential is the Becquerel function. In this work, the applicability of the Becquerel function for the analysis of complex decays of several kinds is tested. For this purpose, decays of mixtures of four different fluorescence standards (binary, ternary and quaternary mixtures) are measured and analyzed. For binary and ternary mixtures, the expected sum of narrow distributions is well recovered from the Becquerel functions analysis, if the correct number of components is used. For ternary mixtures, however, satisfactory fits are also obtained with a number of Becquerel functions smaller than the true number of fluorophores in the mixture, at the expense of broadening the lifetime distributions of the fictitious components. The quaternary mixture studied is well fitted with both a sum of three exponentials and a sum of two Becquerel functions, showing the inevitable loss of information when the number of components is large. Decays of a fluorophore in a heterogeneous environment, known to be represented by unimodal and broad continuous distributions (as previously obtained by the maximum entropy method), are also measured and analyzed. It is concluded that these distributions can be recovered by the Becquerel function method with an accuracy similar to that of the much more complex maximum entropy method. It is also shown that the polar (or phasor) plot is not always helpful for ascertaining the degree (and kind) of complexity of a fluorescence decay. (paper)

  3. Simplified protocol for flow cytometry analysis of fluorescently labeled exosomes and microvesicles using dedicated flow cytometer

    Directory of Open Access Journals (Sweden)

    Vendula Pospichalova

    2015-03-01

    Full Text Available Flow cytometry is a powerful method, which is widely used for high-throughput quantitative and qualitative analysis of cells. However, its straightforward applicability for extracellular vesicles (EVs and mainly exosomes is hampered by several challenges, reflecting mostly the small size of these vesicles (exosomes: ~80–200 nm, microvesicles: ~200–1,000 nm, their polydispersity, and low refractive index. The current best and most widely used protocol for beads-free flow cytometry of exosomes uses ultracentrifugation (UC coupled with floatation in sucrose gradient for their isolation, labeling with lipophilic dye PKH67 and antibodies, and an optimized version of commercial high-end cytometer for analysis. However, this approach requires an experienced flow cytometer operator capable of manual hardware adjustments and calibration of the cytometer. Here, we provide a novel and fast approach for quantification and characterization of both exosomes and microvesicles isolated from cell culture media as well as from more complex human samples (ascites of ovarian cancer patients suitable for multiuser labs by using a flow cytometer especially designed for small particles, which can be used without adjustments prior to data acquisition. EVs can be fluorescently labeled with protein-(Carboxyfluoresceinsuccinimidyl ester, CFSE and/or lipid- (FM specific dyes, without the necessity of removing the unbound fluorescent dye by UC, which further facilitates and speeds up the characterization of microvesicles and exosomes using flow cytometry. In addition, double labeling with protein- and lipid-specific dyes enables separation of EVs from common contaminants of EV preparations, such as protein aggregates or micelles formed by unbound lipophilic styryl dyes, thus not leading to overestimation of EV numbers. Moreover, our protocol is compatible with antibody labeling using fluorescently conjugated primary antibodies. The presented methodology opens the

  4. Production of the ideal sample shape for Total Reflection X-ray Fluorescence analysis

    Energy Technology Data Exchange (ETDEWEB)

    Horntrich, C., E-mail: chorn@ati.ac.at [Atominstitut, Vienna University of Technology, 1020 Wien (Austria); Kregsamer, P.; Prost, J. [Atominstitut, Vienna University of Technology, 1020 Wien (Austria); Stadlbauer, F. [Institut fuer Werkstoffwissenschaft und Werkstofftechnologie, Vienna University of Technology, 1040 Wien (Austria); Wobrauschek, P.; Streli, C. [Atominstitut, Vienna University of Technology, 1020 Wien (Austria)

    2012-11-15

    Total Reflection X-ray Fluorescence analysis (TXRF) is a well-established analytical method in the semiconductor industry for the analysis of silicon wafer surfaces. For the calibration of the spectrometer typically an external standard is used which is sensitive to quantification errors. In general TXRF is known to allow for linear calibration. For small sample amounts (pg to ng region) the thin film approximation is valid neglecting absorption effects of the exciting and the detected radiation. For higher total amounts of sample the relation between fluorescence intensity and sample amount diverges from linearity (saturation effect). These deviations lead to difficulties in quantification with external standard. Content of the presented work is the production of the ideal TXRF sample shape, which was theoretically determined to be ring shaped. A possibility for the production of samples with ring shape is the use of a nanodispensing system combined with a positioning device. Therewith it is possible to produce ring shaped samples in a controlled way with the ring consisting of individual nanodroplets, so that the wanted diameter of the ring can be chosen. A comparison of the fluorescence intensities emitted by contracted and ring shaped samples shows that the ring shape is not only theoretically the best TXRF shape but also experimentally. It could be proven that for contracted samples the saturation effect occurs at a lower sample mass than for samples with ring shape. - Highlights: Black-Right-Pointing-Pointer The ring shape was found to be the theoretically ideal TXRF sample in a former study. Black-Right-Pointing-Pointer A nanodispensing system enables the production of ring shaped samples. Black-Right-Pointing-Pointer Contracted and ring shaped samples were compared. Black-Right-Pointing-Pointer The ring shape was also experimentally proven to be the best TXRF shape.

  5. Physical aspects of quantitative particles analysis by X-ray fluorescence and electron microprobe techniques

    International Nuclear Information System (INIS)

    Markowicz, A.

    1986-01-01

    The aim of this work is to present both physical fundamentals and recent advances in quantitative particles analysis by X-ray fluorescence (XRF) and electron microprobe (EPXMA) techniques. A method of correction for the particle-size effect in XRF analysis is described and theoretically evaluated. New atomic number- and absorption correction procedures in EPXMA of individual particles are proposed. The applicability of these two correction methods is evaluated for a wide range of elemental composition, X-ray energy and sample thickness. Also, a theoretical model for composition and thickness dependence of Bremsstrahlung background generated in multielement bulk specimens as well as thin films and particles are presented and experimantally evaluated. Finally, the limitations and further possible improvements in quantitative particles analysis by XFR and EPXMA are discussed. 109 refs. (author)

  6. Spectroscopic characterization of alkaline earth uranyl carbonates

    International Nuclear Information System (INIS)

    Amayri, Samer; Reich, Tobias; Arnold, Thuro; Geipel, Gerhard; Bernhard, Gert

    2005-01-01

    A series of alkaline uranyl carbonates, M[UO 2 (CO 3 ) 3 ].nH 2 O (M=Mg 2 , Ca 2 , Sr 2 , Ba 2 , Na 2 Ca, and CaMg) was synthesized and characterized by inductively coupled plasma mass spectrometry (ICP-MS) and atomic absorption spectrometry (AAS) after nitric acid digestion, X-ray powder diffraction (XRD), and thermal analysis (TGA/DTA). The molecular structure of these compounds was characterized by extended X-ray absorption fine-structure (EXAFS) spectroscopy and X-ray photoelectron spectroscopy (XPS). Crystalline Ba 2 [UO 2 (CO 3 ) 3 ].6H 2 O was obtained for the first time. The EXAFS analysis showed that this compound consists of (UO 2 )(CO 3 ) 3 clusters similar to the other alkaline earth uranyl carbonates. The average U-Ba distance is 3.90+/-0.02A.Fluorescence wavelengths and life times were measured using time-resolved laser-induced fluorescence spectroscopy (TRLFS). The U-O bond distances determined by EXAFS, TRLFS, XPS, and Raman spectroscopy agree within the experimental uncertainties. The spectroscopic signatures observed could be useful for identifying uranyl carbonate species adsorbed on mineral surfaces

  7. Fiber Based Mid Infrared Supercontinuum Source for Spectroscopic Analysis in Food Production

    DEFF Research Database (Denmark)

    Ramsay, Jacob; Dupont, Sune Vestergaard Lund; Keiding, Søren Rud

    Optimization of sustainable food production is a worldwide challenge that is undergoing continuous development as new technologies emerge. Applying solutions for food analysis with novel bright and broad mid-infrared (MIR) light sources has the potential to meet the increasing demands for food...... quality and production optimization. By combining a new MIR supercontinuum source with spectroscopy and chemometrics, we seek to enable faster and more precise analysis of grains, soils and dairy products....

  8. Optical gradients in a-Si:H thin films detected using real-time spectroscopic ellipsometry with virtual interface analysis

    Science.gov (United States)

    Junda, Maxwell M.; Karki Gautam, Laxmi; Collins, Robert W.; Podraza, Nikolas J.

    2018-04-01

    Virtual interface analysis (VIA) is applied to real time spectroscopic ellipsometry measurements taken during the growth of hydrogenated amorphous silicon (a-Si:H) thin films using various hydrogen dilutions of precursor gases and on different substrates during plasma enhanced chemical vapor deposition. A procedure is developed for optimizing VIA model configurations by adjusting sampling depth into the film and the analyzed spectral range such that model fits with the lowest possible error function are achieved. The optimal VIA configurations are found to be different depending on hydrogen dilution, substrate composition, and instantaneous film thickness. A depth profile in the optical properties of the films is then extracted that results from a variation in an optical absorption broadening parameter in a parametric a-Si:H model as a function of film thickness during deposition. Previously identified relationships are used linking this broadening parameter to the overall shape of the optical properties. This parameter is observed to converge after about 2000-3000 Å of accumulated thickness in all layers, implying that similar order in the a-Si:H network can be reached after sufficient thicknesses. In the early stages of growth, however, significant variations in broadening resulting from substrate- and processing-induced order are detected and tracked as a function of bulk layer thickness yielding an optical property depth profile in the final film. The best results are achieved with the simplest film-on-substrate structures while limitations are identified in cases where films have been deposited on more complex substrate structures.

  9. Utilization of Solar Dynamics Observatory space weather digital image data for comparative analysis with application to Baryon Oscillation Spectroscopic Survey

    Science.gov (United States)

    Shekoyan, V.; Dehipawala, S.; Liu, Ernest; Tulsee, Vivek; Armendariz, R.; Tremberger, G.; Holden, T.; Marchese, P.; Cheung, T.

    2012-10-01

    Digital solar image data is available to users with access to standard, mass-market software. Many scientific projects utilize the Flexible Image Transport System (FITS) format, which requires specialized software typically used in astrophysical research. Data in the FITS format includes photometric and spatial calibration information, which may not be useful to researchers working with self-calibrated, comparative approaches. This project examines the advantages of using mass-market software with readily downloadable image data from the Solar Dynamics Observatory for comparative analysis over with the use of specialized software capable of reading data in the FITS format. Comparative analyses of brightness statistics that describe the solar disk in the study of magnetic energy using algorithms included in mass-market software have been shown to give results similar to analyses using FITS data. The entanglement of magnetic energy associated with solar eruptions, as well as the development of such eruptions, has been characterized successfully using mass-market software. The proposed algorithm would help to establish a publicly accessible, computing network that could assist in exploratory studies of all FITS data. The advances in computer, cell phone and tablet technology could incorporate such an approach readily for the enhancement of high school and first-year college space weather education on a global scale. Application to ground based data such as that contained in the Baryon Oscillation Spectroscopic Survey is discussed.

  10. Rapid Simultaneous Amplification and Detection of the MBR/JH Chromosomal Translocation by Fluorescence Melting Curve Analysis

    Science.gov (United States)

    Bohling, Sandra D.; King, Thomas C.; Wittwer, Carl T.; Elenitoba-Johnson, Kojo S. J.

    1999-01-01

    Polymerase chain reaction (PCR) amplification and product analysis for the detection of chromosomal translocations, such as the t(14;18), has traditionally been a two-step process. PCR product detection has generally entailed gel electrophoresis and/or hybridization or sequencing for confirmation of assay specificity. Using a microvolume fluorimeter integrated with a thermal cycler and a PCR-compatible double-stranded DNA (dsDNA) binding fluorescent dye (SYBR Green I), we investigated the feasibility of simultaneous thermal amplification and detection of MBR/JH translocation products by fluorescence melting curve analysis. We analyzed DNA from 30 cases of lymphoproliferative disorders comprising 19 cases of previously documented MBR/JH-positive follicle center lymphoma and 11 reactive lymphadenopathies. The samples were coded and analyzed blindly for the presence of MBR/JH translocations by fluorescence melting curve analysis. We also performed dilutional assays using the MBR/JH-positive cell line SUDHL-6. Multiplex PCR for MBR/JH and β-globin was used to simultaneously assess sample adequacy. All (100%) of the 19 cases previously determined to be MBR/JH positive by conventional PCR analysis showed a characteristic sharp decrease in fluorescence at ∼90°C by melting curve analysis after amplification. Fluorescence melting peaks obtained by plotting the negative derivative of fluorescence over temperature (−dF/dT) versus temperature (T) showed melting temperatures (Tm) at 88.85 ± 1.15°C. In addition, multiplex assays using both MBR/JH and β-globin primers yielded easily distinguishable fluorescence melting peaks at ∼90°C and 81.2°C, respectively. Dilutional assays revealed that fluorescence melting curve analysis was more sensitive than conventional PCR and agarose gel electrophoresis with ultraviolet transillumination by as much as 100-fold. Simultaneous amplification and fluorescence melting curve analysis is a simple, reliable, and sensitive method

  11. Preparation of uranium standard solutions for x-ray fluorescence analysis

    International Nuclear Information System (INIS)

    Wong, C.M.; Cate, J.L.; Pickles, W.L.

    1978-03-01

    A method has been developed for gravimetrically preparing uranium nitrate standards with an estimated mean error of 0.1% (1 sigma) and a maximum error of 0.2% (1 sigma) for the total uranium weight. Two source materials, depleted uranium dioxide powder and NBS Standard Reference Material 960 uranium metal, were used to prepare stock solutions. The NBS metal proved to be superior because of the small but inherent uncertainty in the stoichiometry of the uranium oxide. These solutions were used to prepare standards in a freeze-dried configuration suitable for x-ray fluorescence analysis. Both gravimetric and freeze-drying techniques are presented. Volumetric preparation was found to be unsatisfactory for 0.1% precision for the sample size of interest. One of the primary considerations in preparing uranium standards for x-ray fluorescence analysis is the development of a technique for dispensing a 50-μl aliquot of a standard solution with a precision of 0.1% and an accuracy of 0.1%. The method developed corrects for variation in aliquoting and for evaporation loss during weighing. Two sets, each containing 50 standards have been produced. One set has been retained by LLL and one set retained by the Savannah River project

  12. Development of image analysis for graphite pore-structure determination using fluorescence techniques

    International Nuclear Information System (INIS)

    Stephen, W.J.; Bowden, E.A.T.; Wickham, A.J.

    1983-03-01

    The use of image analysis to assess the pore structure of graphite has been developed to the point at which it may be considered available for routine use. A definitive pore structure in terms of the geometry-independent ''characteristic pore dimension'' is derived from the computer analysis of polished specimens whose open-pore structure has been impregnated with bismuth or a fluorescent epoxy resin, with the very small pores identified separately by mercury porosimetry as in the past. The pore-size distributions obtained from these combined techniques have been used successfully to predict the corrosion rates of nine graphites, of widely differing pore structure, in a variety of gas compositions and, indirectly, to confirm appropriate mean ranges and rate constants for the reaction of the oxidising species in these gas mixtures. The development of the fluorescent-impregnant technique is discussed in detail and its use is justified in preference to ''traditional'' methods. Further possible refinements are discussed, including the eventual aim of obtaining a computer prediction of the future oxidation behaviour of the graphite directly from the image analyser. (author)

  13. Automated Aflatoxin Analysis Using Inline Reusable Immunoaffinity Column Cleanup and LC-Fluorescence Detection.

    Science.gov (United States)

    Rhemrev, Ria; Pazdanska, Monika; Marley, Elaine; Biselli, Scarlett; Staiger, Simone

    2015-01-01

    A novel reusable immunoaffinity cartridge containing monoclonal antibodies to aflatoxins coupled to a pressure resistant polymer has been developed. The cartridge is used in conjunction with a handling system inline to LC with fluorescence detection to provide fully automated aflatoxin analysis for routine monitoring of a variety of food matrixes. The handling system selects an immunoaffinity cartridge from a tray and automatically applies the sample extract. The cartridge is washed, then aflatoxins B1, B2, G1, and G2 are eluted and transferred inline to the LC system for quantitative analysis using fluorescence detection with postcolumn derivatization using a KOBRA® cell. Each immunoaffinity cartridge can be used up to 15 times without loss in performance, offering increased sample throughput and reduced costs compared to conventional manual sample preparation and cleanup. The system was validated in two independent laboratories using samples of peanuts and maize spiked at 2, 8, and 40 μg/kg total aflatoxins, and paprika, nutmeg, and dried figs spiked at 5, 20, and 100 μg/kg total aflatoxins. Recoveries exceeded 80% for both aflatoxin B1 and total aflatoxins. The between-day repeatability ranged from 2.1 to 9.6% for aflatoxin B1 for the six levels and five matrixes. Satisfactory Z-scores were obtained with this automated system when used for participation in proficiency testing (FAPAS®) for samples of chilli powder and hazelnut paste containing aflatoxins.

  14. Development of a compact grazing exit X-ray fluorescence spectrometer for fast trace elemental analysis

    Energy Technology Data Exchange (ETDEWEB)

    Ashida, Takafumi, E-mail: ashidatakafumi@gmail.com; Tsuji, Kouichi

    2014-11-01

    A compact grazing exit X-ray fluorescence (GE-XRF) spectrometer was developed in the laboratory. An Al cylindrical collimator for the primary X-rays was placed just above the sample stage. This collimator also played the role of an exit slit to detect fluorescent X-rays at small grazing exit angles. Therefore, no additional exit slit was used in this setup, leading to a compact design. The entire size of the analysis equipment was 80 mm × 200 mm × 170 mm (horizontal × vertical × height). The maximum exit angle was adjusted to the height of the sample stage. The background was drastically reduced at grazing exit angles, enabling trace elemental analysis. A calibration curve was obtained using 10 μL Ga solutions. Accordingly, the detection limit for Ga was evaluated to be 20 ppb. - Highlights: • We developed a compact GE-XRF spectrometer. • The dimension of GE-XRF spectrometer was 80 mm × 200 mm × 170 mm. • A detection limit of 20 ppb for Ga was obtained. • Analytical performance was comparable with that of a table-top TXRF spectrometer.

  15. Structural Analysis of Crystalline R(+)-α-Lipoic Acid-α-cyclodextrin Complex Based on Microscopic and Spectroscopic Studies.

    Science.gov (United States)

    Ikuta, Naoko; Endo, Takatsugu; Hosomi, Shota; Setou, Keita; Tanaka, Shiori; Ogawa, Noriko; Yamamoto, Hiromitsu; Mizukami, Tomoyuki; Arai, Shoji; Okuno, Masayuki; Takahashi, Kenji; Terao, Keiji; Matsugo, Seiichi

    2015-10-16

    R(+)-α-lipoic acid (RALA) is a naturally-occurring substance, and its protein-bound form plays significant role in the energy metabolism in the mitochondria. RALA is vulnerable to a variety of physical stimuli, including heat and UV light, which prompted us to study the stability of its complexes with cyclodextrins (CDs). In this study, we have prepared and purified a crystalline RALA-αCD complex and evaluated its properties in the solid state. The results of ¹H NMR and PXRD analyses indicated that the crystalline RALA-αCD complex is a channel type complex with a molar ratio of 2:3 (RALA:α-CD). Attenuated total reflection/Fourier transform infrared analysis of the complex showed the shift of the C=O stretching vibration of RALA due to the formation of the RALA-αCD complex. Raman spectroscopic analysis revealed the significant weakness of the S-S and C-S stretching vibrations of RALA in the RALA-αCD complex implying that the dithiolane ring of RALA is almost enclosed in glucose ring of α-CD. Extent of this effect was dependent on the direction of the excitation laser to the hexagonal morphology of the crystal. Solid-state NMR analysis allowed for the chemical shift of the C=O peak to be precisely determined. These results suggested that RALA was positioned in the α-CD cavity with its 1,2-dithiolane ring orientated perpendicular to the plane of the α-CD ring.

  16. Time- and Space-Resolved Spectroscopic Investigation on Pi-Conjugated Nanostructures - 2

    Science.gov (United States)

    2016-01-12

    conformations and the location of fluorescent trapping sites in multichromophoric macrocycles using single- molecule spectroscopic methods provides...multichromophoric macrocycles using single-molecule spectroscopic methods provides not only a new level of understanding, but will also stimulate other...AFRL-AFOSR-JP-TR-2016-0029 Time- and Space-Resolved Spectroscopic Investigation on Pi-Conjugated Nanostructures - 2 Dongho Kim YONSEI UNIVERSITY

  17. Evaluation of ABS resin disk certified reference materials for heavy metal analysis by x-ray fluorescence analysis

    International Nuclear Information System (INIS)

    Ohata, Masaki; Kidokoro, Toshihiro; Kurahashi, Masayasu; Hioki, Akiharu

    2010-01-01

    ABS resin disk certified reference materials (CRMs) for heavy-metal analysis (NMIJ CRM 8105-a, NMIJ CRM 8106-a, NMIJ CRM 8115-a and NMIJ CRM 8116-a) were evaluated using an energy dispersive X-ray fluorescence (ED-XRF) analysis. The homogeneities of elements for both among-disks and within-disk were evaluated by ED-XRF analysis without any sample pre-treatment, which were similar to those evaluated by ICP-MS analysis after a sample digenstion procedure. The normalized XRF sensitivities for Cd, Cr and Pb in different ABS resin disk CRMs were compared, and the differences among them for those ABS resin disks that have similar matrices were observed. Moreover, Hg in those ABS resin disk CRMs was stable for long-term X-ray irradiation during ED-XRF analysis. (author)

  18. Spectroscopic analysis in the virtual observatory environment with SPLAT-VO

    Czech Academy of Sciences Publication Activity Database

    Škoda, Petr; Draper, P.; Neves, M.C.; Andrešič, D.; Jenness, T.

    7–8, November–December (2014), s. 108-120 ISSN 2213-1337 R&D Projects: GA ČR GA13-08195S Institutional support: RVO:67985815 Keywords : spectral analysis * virtual observatory Subject RIV: BN - Astronomy, Celestial Mechanics, Astrophysics

  19. Quantitative Analysis of Polyacrylamide Grafted on Polylactide Film Surfaces Employing Spectroscopic Techniques.

    Science.gov (United States)

    Rahman, Mijanur; Opaprakasit, Pakorn

    2017-11-01

    Standard techniques for quantitative measurement of polyacrylamide (PAm) contents grafted on polylactide (PLA) film substrates, P(LA- g-Am- co-MBAm), which are commonly used as cell culture substrates or scaffolds, and pH-sensitive absorbents have been developed with X-ray photoelectron (XPS), proton-nuclear magnetic resonance ( 1 H-NMR), and Fourier transform infrared (FT-IR) spectroscopy. The techniques are then applied to examine P(LA- g-Am- co-MBAm) samples prepared from two separate photo-initiator/co-initiator systems. Efficiency and accuracy of the techniques are compared. The results from all techniques are in good agreement, indicating high analysis precisions, although FT-IR technique provides additional advantages, in terms of short analysis time, ease of sample preparation, and accessibility of a machine. The results indicate that the riboflavin (RF) initiator system has higher grafting efficiency than its camphorquinone (CQ) counterpart. These standard techniques can be applied in the analysis of these materials and further modified for quantitative analysis of other grafting systems.

  20. Using Raman spectroscopic imaging for non-destructive analysis of filler distribution in chalk filled polypropylene

    DEFF Research Database (Denmark)

    Boros, Evelin; Porse, Peter Bak; Nielsen, Inga

    2016-01-01

    A feasibility study on using Raman spectral imaging for visualization and analysis of filler distribution in chalk filled poly-propylene samples has been carried out. The spectral images were acquired using a Raman spectrometer with 785 nm light source.Eight injection-molded samples with concentr...

  1. Tackling calibration problems of spectroscopic analysis in high-throughput experimentation

    NARCIS (Netherlands)

    Cruz, Susana C.; Rothenberg, Gadi; Westerhuis, Johan A.; Smilde, Age K.

    2005-01-01

    High-throughput experimentation and screening methods are changing work flows and creating new possibilities in biochemistry, organometallic chemistry, and catalysis. However, many high-throughput systems rely on off-line chromatography methods that shift the bottleneck to the analysis stage.

  2. Solving of some environmental pollution problems by X-ray fluorescence analysis

    International Nuclear Information System (INIS)

    Piorek, S.

    1980-01-01

    The application of Energy Dispersive X-Ray Fluorescence Analysis for environmental pollution control is described. The paper gives details of both sampling and measurement procedures for air particles and plant samples. The usability of the method is shown on some examples typical in environment protection practice. For instance with simultaneous sampling of air in more than one place, one can identify the polluting source and determine the contribution of this source to the total level of local pollution as well. It is possible with the EDXRF to investigate short and long-term concentration variations of metals in air including the distance factor too. Analysis of plant samples was performed in order to evaluate the contribution of automotive traffic to environmental pollution in areas of national parks. Examples of application of the method described in the paper give evidence of the EDXRF as a good tool for investigating environmental pollution. (author)

  3. Quantitative X-ray fluorescence analysis at the ESRF ID18F microprobe

    CERN Document Server

    Vekemans, B; Somogyi, A; Drakopoulos, M; Kempenaers, L; Simionovici, A; Adams, F

    2003-01-01

    The new ID18F end-station at the European synchrotron radiation facility (ESRF) in Grenoble (France) is dedicated to sensitive and accurate quantitative micro-X-ray fluorescence (XRF) analysis at the ppm level with accuracy better than 10% for elements with atomic numbers above 18. For accurate quantitative analysis, given a high level of instrumental stability, major steps are the extraction and conversion of experimental X-ray line intensities into elemental concentrations. For this purpose a two-step quantification approach was adopted. In the first step, the collected XRF spectra are deconvoluted on the basis of a non-linear least-squares fitting algorithm (AXIL). The extracted characteristic line intensities are then used as input for a detailed Monte Carlo (MC) simulation code dedicated to XRF spectroscopy taking into account specific experimental conditions (excitation/detection) as well as sample characteristics (absorption and enhancement effects, sample topology, heterogeneity etc.). The iterative u...

  4. Automatic scatter detection in fluorescence landscapes by means of spherical principal component analysis

    DEFF Research Database (Denmark)

    Kotwa, Ewelina Katarzyna; Jørgensen, Bo Munk; Brockhoff, Per B.

    2013-01-01

    In this paper, we introduce a new method, based on spherical principal component analysis (S‐PCA), for the identification of Rayleigh and Raman scatters in fluorescence excitation–emission data. These scatters should be found and eliminated as a prestep before fitting parallel factor analysis...... models to the data, in order to avoid model degeneracies. The work is inspired and based on a previous research, where scatter removal was automatic (based on a robust version of PCA called ROBPCA) and required no visual data inspection but appeared to be computationally intensive. To overcome...... this drawback, we implement the fast S‐PCA in the scatter identification routine. Moreover, an additional pattern interpolation step that complements the method, based on robust regression, will be applied. In this way, substantial time savings are gained, and the user's engagement is restricted to a minimum...

  5. Multi-element analysis of pyrite ores using polarized energy-dispersive X-ray fluorescence spectrometry

    Energy Technology Data Exchange (ETDEWEB)

    Ustuendag, Zafer [Department of Chemistry, Faculty of Science, Ankara University, Ankara (Turkey)]. E-mail: zustun@science.ankara.edu.tr; Ustuendag, Ilknur [Department of Physics Engineering, Faculty of Engineering, Hacettepe University, Ankara (Turkey); Kagan Kadioglu, Yusuf [Department of Geological Engineering, Faculty of Engineering, Ankara University, Ankara (Turkey)

    2007-07-15

    X-ray fluorescence (XRF) spectrometry is used worldwide in geological material analysis. This study, applies polarized energy-dispersive X-ray fluorescence (PEDXRF) Spectrometer and compares in the samples of Rize-Cayeli and Mardin pyrite ores. The samples of pyrite ore were collected from the Rize and Mardin in Turkey. The prepared samples were analyzed using a PEDXRF spectrometer. The result of the analysis shows the presence of many elements including rare-earth elements (from Na to Th). The accuracy and precision of the technique for chemical analysis is demonstrated by analyzing USGS standards, GEOL, GBW 7109 and GBW-7309 sediment.

  6. Microsampling techniques for infrared spectroscopic analysis of lunar and terrestrial minerals

    Science.gov (United States)

    Estep, P. A.; Kovach, J. J.; Karr, C.

    1973-01-01

    Microsampling techniques have been developed for infrared analysis of single mineral grains from lunar rocks and dusts, allowing a detailed molecular structure characterization of these complex fine-grained samples. The methods include special devices for isolating single grains, preparing micropellets from the grains, and obtaining in situ microspecular reflectance spectra from grains in polished rock samples. Although specifically developed for the work on lunar samples, the special techniques for single grain infrared analysis were found to be equally useful in studies of complex terrestrial mineral samples. For example, infrared microanalysis has contributed substantially in solving problems concerned with our natural resources, such as the structural characterization of minerals from commercial iron ores, marine deposits, coal, and fly ash derived from coal.

  7. Spectroscopic Studies of Fluorescence Effects in Bioactive 4-(5-Heptyl-1,3,4-Thiadiazol-2-yl)Benzene-1,3-Diol and 4-(5-Methyl-1,3,4-Thiadiazol-2-yl)Benzene-1,3-Diol Molecules Induced by pH Changes in Aqueous Solutions.

    Science.gov (United States)

    Matwijczuk, Arkadiusz; Kluczyk, Dariusz; Górecki, Andrzej; Niewiadomy, Andrzej; Gagoś, Mariusz

    2017-07-01

    This paper presents the results of stationary fluorescence spectroscopy and time-resolved spectroscopy analyses of two 1,3,4-thiadiazole analogues, i.e. 4-(5-methyl-1,3,4-thiadiazol-2-yl)benzene-1,3-diol (C1) and 4-(5-heptyl-1,3,4-thiadiazol-2-yl)benzene-1,3-diol (C7) in an aqueous medium containing different concentrations of hydrogen ions. An interesting dual florescence effect was observed when both compounds were dissolved in aqueous solutions at pH below 7 for C1 and 7.5 for C7. In turn, for C1 and C7 dissolved in water at pH higher than the physiological value (mentioned above), single fluorescence was only noted. Based on previous results of investigations of the selected 1,3,4-thiadiazole compounds, it was noted that the presented effects were associated with both conformational changes in the analysed molecules and charge transfer (CT) effects, which were influenced by the aggregation factor. However, in the case of C1 and C7, the dual fluorescence effects were visible in a higher energetic region (different than that observed in the 1,3,4-thiadiazoles studied previously). Measurements of the fluorescence lifetimes in a medium characterised by different concentrations of hydrogen ions revealed clear lengthening of the excited-state lifetime in a pH range at which dual fluorescence effects can be observed. An important finding of the investigations presented in this article is the fact that the spectroscopic effects observed not only are interesting from the cognitive point of view but also can help in development of an appropriate theoretical model of molecular interactions responsible for the dual fluorescence effects in the analysed 1,3,4-thiadiazoles. Furthermore, the study will clarify a broad range of biological and pharmaceutical applications of these compounds, which are more frequently used in clinical therapies. Graphical Abstract Upper left corner - C7 molecule at high pH, right upper corner - fluorescence emission spectrum for C7 dissolved in H

  8. [Infrared spectroscopic study on the component and vigor analysis of Cistanche deserticola seeds].

    Science.gov (United States)

    Xu, Rong; Sun, Su-Qin; Chen, Jun; Chen, Shi-Lin; Zhou, Feng

    2009-01-01

    Comparative study of the different parts of cistanche deserticola seeds and their changes after different processing were examined by Fourier transform infrared spectroscopy spectra (FTIR). The results of the analysis showed that components in the cistanche deserticola seeds were abundant, which contained characteristic absorption peaks of protein, fat and carbohydrate. As well, pectin and aromatic compound can be also found in the seeds. However, the components were different in different parts of cistanche deserticola seeds. The characteristic absorption peak intensities of fat at 2,926, 1,746, 1,161 and 721 cm(-1) were the strongest in the seed kernels. However, the seed coats mainly consisted of carbohydrate and pectin, which were showed at 1,054 cm(-1). The contents of protein and carbohydrate were decreased distinctly in the moldy and dead seeds after processing. The characteristic absorption peak intensity ratio of protein to fat (I1,630/I1,745 ) was all higher than 1.05 in the live seeds. The characteristic absorption peak intensity ratio of amido link I of protein to fat (11,653/I1,745) in the dead seed kernels of the cistanche deserticola was decreased from 0.31 to 0. 23, which was 25.8% less than that in vital seed kernels. The results suggest that FTIR not only can be used in fast comprehensive analysis of seed components, but also can be used in the seed vigor analysis, seed longevity determination and seed quality evaluation.

  9. A LabVIEW-based electrical bioimpedance spectroscopic data interpreter (LEBISDI) for biological tissue impedance analysis and equivalent circuit modelling

    KAUST Repository

    Bera, Tushar Kanti

    2016-12-05

    Under an alternating electrical signal, biological tissues produce a complex electrical bioimpedance that is a function of tissue composition and applied signal frequencies. By studying the bioimpedance spectra of biological tissues over a wide range of frequencies, we can noninvasively probe the physiological properties of these tissues to detect possible pathological conditions. Electrical impedance spectroscopy (EIS) can provide the spectra that are needed to calculate impedance parameters within a wide range of frequencies. Before impedance parameters can be calculated and tissue information extracted, impedance spectra should be processed and analyzed by a dedicated software program. National Instruments (NI) Inc. offers LabVIEW, a fast, portable, robust, user-friendly platform for designing dataanalyzing software. We developed a LabVIEW-based electrical bioimpedance spectroscopic data interpreter (LEBISDI) to analyze the electrical impedance spectra for tissue characterization in medical, biomedical and biological applications. Here, we test, calibrate and evaluate the performance of LEBISDI on the impedance data obtained from simulation studies as well as the practical EIS experimentations conducted on electronic circuit element combinations and the biological tissue samples. We analyze the Nyquist plots obtained from the EIS measurements and compare the equivalent circuit parameters calculated by LEBISDI with the corresponding original circuit parameters to assess the accuracy of the program developed. Calibration studies show that LEBISDI not only interpreted the simulated and circuitelement data accurately, but also successfully interpreted tissues impedance data and estimated the capacitive and resistive components produced by the compositions biological cells. Finally, LEBISDI efficiently calculated and analyzed variation in bioimpedance parameters of different tissue compositions, health and temperatures. LEBISDI can also be used for human tissue

  10. Quantitative analysis of thorium in the presence of rare earth by X-ray fluorescence spectrometry

    International Nuclear Information System (INIS)

    Jesus, Camila S. de; Taam, Isabel; Vianna, Claudio A.

    2013-01-01

    The occurrence of Thorium in ores is normally associated to other elements such as Uranium and Cerium, as well as some Rare-Earths (RE). The separation of these elements by traditional analytic chemistry techniques is both time and reagent consuming, thus increasing the analysis cost. The hereby proposed method consists in the direct determination of Thorium in rare earths ores and compounds by X-ray fluorescence spectroscopy without any prior chemical separation from other matrix elements. This non-destructive technique is used to determine which elements are present in solid and liquid samples, as well as their concentrations. The studied matrix contains Lanthanum, Cerium, Praseodymium, Neodymium, Samarium, Gadolinium and Yttrium. This study evaluated the analytical lines of radiation emission for each rare earth contained in the matrix, comparing it to the Thorium main analytical line. The Thorium quantification was measured through the Th L line, where there is no influence or interference from the rare earths analytical lines. The studied samples are certified standards and the obtained results have been compared to Ethylenediaminetetraacetic acid (EDTA) titration results, an already well-established and widely trusted method. We also measured the matrix effect thus using complex rare earths liquor. This liquor contains also elements commonly found in monazites sands: phosphates, aluminum, iron. Obtained results state the efficiency of X-ray Fluorescence to determine Thorium in the presence of rare earths without any prior chemical separation. (author)

  11. Scanning protein analysis of electrofocusing gels using X-ray fluorescence.

    Science.gov (United States)

    Matsuyama, Satoshi; Matsunaga, Akihiro; Sakamoto, Shinichi; Iida, Yutaka; Suzuki, Yoshinari; Ishizaka, Yukihito; Yamauchi, Kazuto; Ishikawa, Tetsuya; Shimura, Mari

    2013-05-01

    Recently, "metallomics," in addition to genomics and proteomics, has become a focus as a novel approach to identify sensitive fluctuations in homeostasis that accompany metabolic processes, such as stress responses, differentiation, and proliferation. Cellular elements and associated protein behavior provide important clues for understanding cellular and disease mechanism(s). It is important to develop a system for measuring the native status of the protein. In this study, we developed an original freeze-dried electrofocusing native gel over polyimide film (native-gel film) for scanning protein analysis using synchrotron radiation excited X-ray fluorescence (SPAX). To our knowledge, this is the first report detailing the successful mapping of metal-associated proteins of electrofocusing gels using X-ray fluorescence. SPAX can provide detection sensitivity equivalent to that of LA-ICP-MS. In addition to this increased sensitivity, SPAX has the potential to be combined with other X-ray spectroscopies. Our system is useful for further applications in proteomics investigating cellular element-associated protein behaviors and disease mechanisms.

  12. Dual x-ray fluorescence spectrometer and method for fluid analysis

    Science.gov (United States)

    Wilson, Bary W.; Shepard, Chester L.

    2005-02-22

    Disclosed are an X-ray fluorescence (SRF) spectrometer and method for on-site and in-line determination of contaminant elements in lubricating oils and in fuel oils on board a marine vessel. An XRF source block 13 contains two radionuclide sources 16, 17 (e.g. Cd 109 and Fe 55), each oriented 180 degrees from the other to excite separate targets. The Cd 109 source 16 excites sample lube oil flowing through a low molecular weight sample line 18. The Fe 55 source 17 excites fuel oil manually presented to the source beam inside a low molecular weight vial 26 or other container. Two separate detectors A and B are arranged to detect the fluorescent x-rays from the targets, photons from the analyte atoms in the lube oil for example, and sulfur identifying x-rays from bunker fuel oil for example. The system allows both automated in-line and manual on-site analysis using one set of signal processing and multi-channel analyzer electronics 34, 37 as well as one computer 39 and user interface 43.

  13. A robust X-ray fluorescence technique for multielemental analysis of solid samples.

    Science.gov (United States)

    Kallithrakas-Kontos, Nikolaos; Foteinis, Spyros; Paigniotaki, Katherine; Papadogiannakis, Minos

    2016-02-01

    X-ray fluorescence (XRF) quantitation software programs are widely used for analyzing environmental samples due to their versatility but at the expense of accuracy. In this work, we propose an accurate, robust, and versatile technique for multielemental X-ray fluorescence analytical applications, by spiking solid matrices with standard solutions. National Institute of Standards and Technology (NIST)-certified soil standards were spiked with standard solutions, mixed well, desiccated, and analyzed by an energy dispersive XRF. Homogenous targets were produced and low error calibration curves, for the added and not added, neighboring, elements, were obtained. With the addition of few elements, the technique provides reliable multielemental analysis, even for concentrations of the order of milligram per kilogram (ppm). When results were compared to the ones obtained from XRF commercial quantitation software programs, which are widely used in environmental monitoring and assessment applications, they were found to fit certified values better. Moreover, in all examined cases, results were reliable. Hence, this technique can also be used to overcome difficulties associated with interlaboratory consistency and for cross-validating results. The technique was applied to samples with an environmental interest, collected from a ship/boat repainting area. Increased copper, zinc, and lead loads were observed (284, 270, and 688 mg/kg maximum concentrations in soil, respectively), due to vessels being paint stripped and repainted.

  14. Multi-element analysis by portable total reflection X-ray fluorescence spectrometer.

    Science.gov (United States)

    Liu, Ying; Imashuku, Susumu; Kawai, Jun

    2013-01-01

    Multi-element solutions containing the 11 elements S, K, Sc, V, Mn, Co, Cu, Ga, As, Br and Y were analyzed by a portable total reflection X-ray fluorescence (TXRF) spectrometer. The excitation parameters (glancing angle, operational voltage and current) and sample amount were optimized for the portable TXRF in order to realize the smallest possible detection limits for all elements. The excitation parameter dependencies of the fluorescence signal and background for the detected elements are explained in detail. Background contributed by the sample carrier is also discussed. Consequently, nine elements were detectable at sub-nanogram levels in a single measurement of 10 min under the optimal experimental conditions. The portable TXRF spectrometer was found to be suitable for simultaneous multi-element analysis with low detection limits. The features of high sensitivity, small sample amount required, and fast detection of a wide range of elements make the portable TXRF a valuable tool in various applications, such as field studies in environmental and geological investigations.

  15. Investigations on IR-spectroscopic process analysis of phosphate in aqueous solution

    International Nuclear Information System (INIS)

    Vonach, R.

    1996-04-01

    This thesis is focusing on the development and optimization of a new analysis system for phosphate in aqueous solution based on FTIR-spectrometry. The investigation was aiming at an application in process analytical chemistry. Since the quality control of non-nutritive sweetened carbonated beverages (diet soft drinks) is still performed manually by means of the photometric molybdenum blue reaction, there is an industrial demand for an automated analysis system for phosphate in the concentration range of 200 to 600 mg/L. Because of technical and economic aspects the transferability of the method on a filter instrument is taken into further considerations. First experiments were concentrating on the stretching vibrations of the individual dissociation states of phosphate in the spectral region from 900 to 1200 cm-' and on their suitability for quantitative analysis. Finally, the reagent addition by means of an ion-exchange membrane (Nafion) was investigated. With that method it is principally possible to change the pH without any mechanical component. Although a good repeatability (3 mg/L) was obtained in phosphate standard solutions, it was not possible to achieve a conversion independent of the reagent (donor) flow rate. This would be achieved, if the conversion was close to equilibrium. However, this was not realized within a reasonable period of time. Summing up a new concept for measuring phosphate in aqueous solution by means of pH-modulation was developed, which largely fulfills the practical requirements concerning stability, reproducibility and precision of the flow system. Moreover the transferability to a simple filter instrument based on a single bandpass filter is achieved with the concept of an alternately changing pH. (author)

  16. Spectroscopic, thermal analysis and DFT computational studies of salen-type Schiff base complexes

    Science.gov (United States)

    Ebrahimi, Hossein Pasha; Hadi, Jabbar S.; Abdulnabi, Zuhair A.; Bolandnazar, Zeinab

    2014-01-01

    A new series of metal(II) complexes of Co(II), Ni(II), Cu(II), Zn(II), and Pb(II) have been synthesized from a salen-type Schiff base ligand derived from o-vanillin and 4-methyl-1,2-phenylenediamine and characterized by elemental analysis, spectral (IR, UV-Vis, 1H NMR, 13C NMR and EI-mass), molar conductance measurements and thermal analysis techniques. Coats-Redfern method has been utilized to calculate the kinetic and thermodynamic parameters of the metal complexes. The molecular geometry, Mulliken atomic charges of the studied compounds were investigated theoretically by performing density functional theory (DFT) to access reliable results to the experimental values. The theoretical 13C chemical shift results of the studied compounds have been calculated at the B3LYP, PBEPBE and PW91PW91 methods and standard 6-311+G(d,p) basis set starting from optimized geometry. The comparison of the results indicates that B3LYP/6-311+G(d,p) yields good agreement with the observed chemical shifts. The measured low molar conductance values in DMF indicate that the metal complexes are non-electrolytes. The spectral and thermal analysis reveals that all complexes have octahedral geometry except Cu(II) complex which can attain the square planner arrangement. The presence of lattice and coordinated water molecules are indicated by thermograms of the complexes. The thermogravimetric (TG/DTG) analyses confirm high stability for all complexes followed by thermal decomposition in different steps.

  17. Applying Full Spectrum Analysis to a Raman Spectroscopic Assessment of Fracture Toughness of Human Cortical Bone.

    Science.gov (United States)

    Makowski, Alexander J; Granke, Mathilde; Ayala, Oscar D; Uppuganti, Sasidhar; Mahadevan-Jansen, Anita; Nyman, Jeffry S

    2017-10-01

    A decline in the inherent quality of bone tissue is a † Equal contributors contributor to the age-related increase in fracture risk. Although this is well-known, the important biochemical factors of bone quality have yet to be identified using Raman spectroscopy (RS), a nondestructive, inelastic light-scattering technique. To identify potential RS predictors of fracture risk, we applied principal component analysis (PCA) to 558 Raman spectra (370-1720 cm -1 ) of human cortical bone acquired from 62 female and male donors (nine spectra each) spanning adulthood (age range = 21-101 years). Spectra were analyzed prior to R-curve, nonlinear fracture mechanics that delineate crack initiation (K init ) from crack growth toughness (K grow ). The traditional ν 1 phosphate peak per amide I peak (mineral-to-matrix ratio) weakly correlated with K init (r = 0.341, p = 0.0067) and overall crack growth toughness (J-int: r = 0.331, p = 0.0086). Sub-peak ratios of the amide I band that are related to the secondary structure of type 1 collagen did not correlate with the fracture toughness properties. In the full spectrum analysis, one principal component (PC5) correlated with all of the mechanical properties (K init : r = - 0.467, K grow : r = - 0.375, and J-int: r = - 0.428; p toughness, namely age and/or volumetric bone mineral density (vBMD), were included in general linear models as covariates, several PCs helped explain 45.0% (PC5) to 48.5% (PC7), 31.4% (PC6), and 25.8% (PC7) of the variance in K init , K grow , and J-int, respectively. Deriving spectral features from full spectrum analysis may improve the ability of RS, a clinically viable technology, to assess fracture risk.

  18. Analysis of laser and inkjet prints using spectroscopic methods for forensic identification of questioned documents

    OpenAIRE

    Gál, Lukáš; Belovičová, Michaela; Oravec, Michal; Palková, Miroslava; Čeppan, Michal

    2013-01-01

    The spectral properties in UV-VIS-NIR and IR regions of laser and inkjet prints were studied for the purposes of forensic analysis of documents. The procedures of measurements and processing of spectra of printed documents using fibre optics reflectance spectroscopy in UV-VIS and NIR region, FTIR-ATR with diamond/ZnSe and germanium crystals were optimized. It was found that the shapes of spectra of various black laser jet prints and inkjet prints generally differ in the spectral regions...

  19. CONTUR: A program for X-ray photoemission spectroscopic personal computer-based data analysis

    Science.gov (United States)

    Contini, G.; Turchini, S.

    1996-03-01

    CONTUR, a computer program for photoemission data analysis written in QuickBasic that operates using an IBM personal computer (PC) or compatible, is described. It includes the following functions: plotting of up to four files, files saving, spectra comparison (including addition, subtraction and division) smoothing and median filtering, data marking, differentiating, resizing of X and Y scales, transforming binding into kinetic energy and vice versa, X axis cutting, showing X and Y values of the files, spikes removing, linear and Shirley background subtraction, calculating the area of the peaks, determination of maxima of the file, DOS shell. A brief description of the program and its capabilities is given.

  20. Total reflection X-ray fluorescence analysis of pollen as an indicator for atmospheric pollution

    Energy Technology Data Exchange (ETDEWEB)

    Pepponi, G. E-mail: pepponi@itc.it; Lazzeri, P.; Coghe, N.; Bersani, M.; Gottardini, E.; Cristofolini, F.; Clauser, G.; Torboli, A

    2004-08-31

    The viability of pollen is affected by environmental pollution and its use as a bio-indicator is proposed. Such effects can be observed and quantified by biological tests. However, a more accurate identification of the agents affecting the viability is required in order to validate the biological assay for environmental monitoring. The chemical analysis of pollen is meant to ascertain the existence of a correlation between its reduced biological functions and the presence of pollutants. Moreover, such biological systems act as accumulators and allow the detection and quantification of species present in the environment at low concentrations. Total reflection X-ray fluorescence analysis (TXRF) has been chosen for the investigation due to its high sensitivity, multielement capability and wide dynamic range. Corylus avellana L. (hazel) pollen has been collected in areas with different anthropic impact in the province of Trento, Italy. For the TXRF measurements, a liquid sample is needed, especially if a quantitative analysis is required. In the present work, the analysis after a microwave digestion has been compared with the analysis of a suspension of the pollen samples. In both cases, an internal standard has been used for the quantification. The concentrations of 17 elements ranging from Al to Pb have been determined in 13 samples. Analysis of the suspensions showed to be comparable to that of digested samples in terms of spectral quality, but the latter preparation method gave better reproducibility. Sub-ppm lowest limits of detection were obtained for iron and heavier elements detected.

  1. Application of x-ray fluorescence (XRF) absolute analysis method for silica refractories

    International Nuclear Information System (INIS)

    Asakura, Hideo; Yamada, Yasujiro; Kansai, Kouhei; Tomatsu, Ichirou; Murata, Mamoru

    2015-01-01

    X-ray fluorescence (XRF) analysis is a rapid and precise quantitative analytical method for the determination of major and trace elements in many industries and academics. XRF analytical values are relative due to the use of the calibration curves calculated from measuring the reference standard materials such as Japanese Refractory Reference Materials (JRRM) series with certified values determined by wet chemical analysis. The development of the XRF analytical method from relative to absolute analysis will help much to determine the absolute values of samples from the fields where reference standard samples have not been prepared, and thus can be applied widely in many industries. The implement of the absolute XRF analysis for silica refractories requires high purity reagents and/or reference standard solution for the binary basic calibration curve, and theoretical matrix correction coefficients for the multi-components silica refractories analysis. The reproducibility and repeatability of this method for Al 2 O 3 5 mass% sample were 0.009 and 0.006 mass% in Al 2 O 3 and showed better values that those of ICP-AES recognized as an absolute method in JIS R 2212-2, which yielded 0.028 and 0.031 mass%, respectively. The XRF absolute analysis for JRRM 200 series, 201a and 205a does not show a bias but coincides with their certified values. (author)

  2. Analysis of green fluorescent protein bioluminescence in vivo and in vitro using a glow discharge

    Science.gov (United States)

    Hernández, L.; Mandujano, L. A.; Cuevas, J.; Reyes, P. G.; Osorio-González, D.

    2015-03-01

    The discovery of fluorescent proteins has been a revolution in cell biology and related sciences because of their many applications, mainly emphasizing their use as cellular markers. The green fluorescent protein (GFP) is one of the most used as it requires no cofactors to generate fluorescence and retains this property into any organism when it is expressed by recombinant DNA techniques, which is a great advantage. In this work, we analyze the emission spectra of recombinant green fluorescent protein in vivo and in vitro exposed to a glow discharge plasma of nitrogen in order to relate electron temperature to fluorescence intensity.

  3. Use of spectroscopic techniques for the chemical analysis of biomorphic silicon carbide ceramics

    International Nuclear Information System (INIS)

    Pavon, J.M. Cano; Alonso, E. Vereda; Cordero, M.T. Siles; Torres, A. Garcia de; Lopez-Cepero, J.M.

    2005-01-01

    Biomorphic silicon carbide ceramics are a new class of materials prepared by several complex processing steps including pre-processing (shaping, drying, high-temperature pyrolysis in an inert atmosphere) and reaction with liquid silicon to obtain silicon-carbide. The results of industrial process of synthesis (measured by the SiC content) must be evaluated by means of fast analytical methods. In the present work, diverse samples of biomorphic ceramics derived from wood are studied for to evaluate the capability of the different analytical techniques (XPS, LIBS, FT-IR and also atomic spectroscopy applied to previously dissolved samples) for the analysis of these materials. XPS and LIBS gives information about the major components, whereas XPS and FT-IR can be used to evaluate the content of SiC. On the other hand, .the use of atomic techniques (as ICP-MS and ETA-AAS) is more adequate for the analysis of metal ions, specially at trace level. The properties of ceramics depend decisively of the content of chemical elements. Major components found were C, Si, Al, S, B and Na in all cases. Previous dissolution of the samples was optimised by acid attack in an oven under microwave irradiation

  4. Quantum chemical computations, vibrational spectroscopic analysis and antimicrobial studies of 2,3-Pyrazinedicarboxylic acid

    Science.gov (United States)

    Beaula, T. Joselin; Packiavathi, A.; Manimaran, D.; Joe, I. Hubert; Rastogi, V. K.; Jothy, V. Bena

    2015-03-01

    Density Functional Theory (DFT) calculations at B3PW91 level with 6-311G (d) basis sets were carried out for 2,3-Pyrazinedicarboxylic acid (PDCA) to analyze in detail the equilibrium geometries and vibrational spectra. Calculations reveal that the optimized geometry closely resembles the experimental XRD data. Vibrational spectra were analyzed on the basis of potential energy distribution (PED) of each vibrational mode, which provides quantitative as well as qualitative interpretation of IR and Raman spectra. Information about size, shape, charge density distribution and site of chemical reactivity of the molecule were obtained by mapping electron density isosurface with the electrostatic potential surface (ESP). Based on optimized ground state geometries, NBO analysis was performed to study donor-acceptor (bond-antibond) interactions. TD-DFT analysis was also performed to calculate energies, oscillator strength of electronic singlet-singlet transitions and the absorption wavelengths. The 13C and 1H nuclear magnetic resonance (NMR) chemical shifts of the molecule in the ground state were calculated by gauge independent atomic orbital (GIAO) method and compared with the experimental values. PDCA was screened for its antimicrobial activity and found to exhibit antifungal and antibacterial effects. Molecular docking was also performed for the different receptors.

  5. Spectroscopic analysis of orthonitrodiphenyl sulfide C12H9NO2S

    International Nuclear Information System (INIS)

    Sakane, K.K.

    1988-01-01

    This work reports the synthesis of the first (stable) form a of orthonitrodiphenyl sulphide [1-Nitro, 2-(Phenylthio) Benzene], followed by the preparation of the metastable (β) form, obtained by the method of seeding, caracterization of this form and analysis of structural differences by means of infrared and Raman Spectra. A tentative assignment of frequencies has been made, in which some differences between the two forms are explained. This analysis was based mostly on the solid phase spectra which show striking characteristics of the polymorphic species. Spectra of the β-form are, until now, completely unpublished. The spectra of solutions and melt of the α an β forms are fairly similar to those of solid β. This feature leads to the conclusion that both forms have the same molecular structure in melt and solutions, differing only in the solid state. It is also remarkable that the β-form displays a different Infrared Spectrum in a short range interval of temperature soon after melting. In this transition phase the Spectrum is more like the solid α Spectrum. The phenomenon is credited to a transient liquid crystal character. (author) [pt

  6. Study on x-ray spectroscopic analysis by the use of nuclear radiations from radioisotopes

    International Nuclear Information System (INIS)

    Tominaga, Hiroshi

    1977-02-01

    The basis and practice of analytical application of the characteristic X rays of low atomic number elements excited by mainly alpha rays from radioisotopes were studied. Some alpha emitters were proved to be advantageously usable to those elements, in particular, very low atomic number elements, despite their accompanying radiations. Operating characteristics of gas flow proportional counters were fully investigated, and besides, the characteristics of pulse-height distribution continuum in those counters and semiconductor detectors were comparatively studied as the detector for the low energy X rays. For calibration in quantitative analysis by the X-ray spectroscopy, a new simple semitheoretical method for thin specimens is proposed and on the other hand general formulae for matrix correction in thick specimens was derived. An industrial X-ray analyzer to simultaneously analyze four main elements of cement raw material mixtures was constructed with the use of a 210 Po alpha-ray source and gain-controlled proportional counters. Problems in practical analysis for the process control were solved and the analyzer has been used routinely in the process for more than ten years. Another analytical application to airborne dust is described as a typical example of application of the proposed calibration method for thin specimens. (auth.)

  7. Comparison of three-way and four-way calibration for the real-time quantitative analysis of drug hydrolysis in complex dynamic samples by excitation-emission matrix fluorescence

    Science.gov (United States)

    Yin, Xiao-Li; Gu, Hui-Wen; Liu, Xiao-Lu; Zhang, Shan-Hui; Wu, Hai-Long

    2018-03-01

    Multiway calibration in combination with spectroscopic technique is an attractive tool for online or real-time monitoring of target analyte(s) in complex samples. However, how to choose a suitable multiway calibration method for the resolution of spectroscopic-kinetic data is a troubling problem in practical application. In this work, for the first time, three-way and four-way fluorescence-kinetic data arrays were generated during the real-time monitoring of the hydrolysis of irinotecan (CPT-11) in human plasma by excitation-emission matrix fluorescence. Alternating normalization-weighted error (ANWE) and alternating penalty trilinear decomposition (APTLD) were used as three-way calibration for the decomposition of the three-way kinetic data array, whereas alternating weighted residual constraint quadrilinear decomposition (AWRCQLD) and alternating penalty quadrilinear decomposition (APQLD) were applied as four-way calibration to the four-way kinetic data array. The quantitative results of the two kinds of calibration models were fully compared from the perspective of predicted real-time concentrations, spiked recoveries of initial concentration, and analytical figures of merit. The comparison study demonstrated that both three-way and four-way calibration models could achieve real-time quantitative analysis of the hydrolysis of CPT-11 in human plasma under certain conditions. However, it was also found that both of them possess some critical advantages and shortcomings during the process of dynamic analysis. The conclusions obtained in this paper can provide some helpful guidance for the reasonable selection of multiway calibration models to achieve the real-time quantitative analysis of target analyte(s) in complex dynamic systems.

  8. Comparison of three-way and four-way calibration for the real-time quantitative analysis of drug hydrolysis in complex dynamic samples by excitation-emission matrix fluorescence.

    Science.gov (United States)

    Yin, Xiao-Li; Gu, Hui-Wen; Liu, Xiao-Lu; Zhang, Shan-Hui; Wu, Hai-Long

    2018-03-05

    Multiway calibration in combination with spectroscopic technique is an attractive tool for online or real-time monitoring of target analyte(s) in complex samples. However, how to choose a suitable multiway calibration method for the resolution of spectroscopic-kinetic data is a troubling problem in practical application. In this work, for the first time, three-way and four-way fluorescence-kinetic data arrays were generated during the real-time monitoring of the hydrolysis of irinotecan (CPT-11) in human plasma by excitation-emission matrix fluorescence. Alternating normalization-weighted error (ANWE) and alternating penalty trilinear decomposition (APTLD) were used as three-way calibration for the decomposition of the three-way kinetic data array, whereas alternating weighted residual constraint quadrilinear decomposition (AWRCQLD) and alternating penalty quadrilinear decomposition (APQLD) were applied as four-way calibration to the four-way kinetic data array. The quantitative results of the two kinds of calibration models were fully compared from the perspective of predicted real-time concentrations, spiked recoveries of initial concentration, and analytical figures of merit. The comparison study demonstrated that both three-way and four-way calibration models could achieve real-time quantitative analysis of the hydrolysis of CPT-11 in human plasma under certain conditions. However, it was also found that both of them possess some critical advantages and shortcomings during the process of dynamic analysis. The conclusions obtained in this paper can provide some helpful guidance for the reasonable selection of multiway calibration models to achieve the real-time quantitative analysis of target analyte(s) in complex dynamic systems. Copyright © 2017 Elsevier B.V. All rights reserved.

  9. Analysis of corrosion layers in ancient Roman silver coins with high resolution surface spectroscopic techniques

    International Nuclear Information System (INIS)

    Keturakis, Christopher J.; Notis, Ben; Blenheim, Alex; Miller, Alfred C.; Pafchek, Rob; Notis, Michael R.; Wachs, Israel E.

    2016-01-01

    Highlights: • Five ancient silver alloy coins (225 BCE–244 CE) were analyzed using surface characterization techniques. • Both destructive and non-destructive surface characterization methods were developed. • Alloying with copper, even in small amounts, leads to the formation of an outer Cu 2 O corrosion layer. - Abstract: Determination of the microchemistry of surface corrosion layers on ancient silver alloy coins is important both in terms of understanding the nature of archaeological environmental conditions to which these ancient coins were exposed and also to help in their conservation. In this present study, five ancient silver alloy coins (225 BCE–244 CE) were used as test vehicles to measure their immediate surface microchemistry and evaluate the appropriateness and limitations of High Sensitivity-Low Energy Ion Scattering Spectroscopy (HS-LEIS, 0.3 nm depth analysis), High Resolution-X-ray Photoelectron Spectroscopy (HR-XPS, 1–3 nm depth analysis) and High Resolution-Raman Spectroscopy (HR-Raman, ∼1000 nm depth analysis). Additional information about the deeper corrosion layers, up to ∼300–1000 nm, was provided by dynamic HS-LEIS and HR-Raman spectroscopy. While not archeologically significant, the use of these coins of small commercial value provides data that is more representative of the weaker signals typically obtained from ancient corroded objects, which can be in stark contrast to pristine data often obtained from carefully prepared alloys of known composition. The oldest coins, from 225 to 214 BCE, possessed an outermost surface layer containing Cu 2 O, Na, Al, Pb, and adsorbed hydrocarbons, while the more recent coins, from 98 to 244 CE, contained Cu 2 O, Ag, N, F, Na, Al, S, Cl, and adsorbed hydrocarbons in similar corresponding surface layers. It thus appears that alloying with copper, even in small amounts, leads to the formation of an outer Cu 2 O layer. Depth profiling revealed the presence of K, Na, Cl, and S as key

  10. Raman spectroscopic analysis of oral cells in the high wavenumber region.

    Science.gov (United States)

    Carvalho, Luis Felipe C S; Bonnier, Franck; Tellez, Cláudio; Dos Santos, Laurita; O'Callaghan, Kate; O'Sullivan, Jeff; Soares, Luis Eduardo S; Flint, Stephen; Martin, Airton A; Lyng, Fiona M; Byrne, Hugh J

    2017-12-01

    Raman spectroscopy can provide a molecular-level signature of the biochemical composition and structure of cells with submicrometer spatial resolution and could be useful to monitor changes in composition for early stage and non-invasive cancer diagnosis, both ex-vivo and in vivo. In particular, the fingerprint spectral region (400-1800cm -1 ) has been shown to be very promising for optical biopsy purposes. However, limitations for discrimination of dysplastic and inflammatory processes based on the fingerprint region have been demonstrated. In addition, the Raman spectral signal of dysplastic cells is one important source of misdiagnosis of normal versus pathological tissues. The high wavenumber region (2800-3600cm -1 ) provides more specific information based on NH, OH and CH vibrations and can be used to identify the subtle changes which could be important for discrimination of samples. In this study, we demonstrate the potential of the high-wavenumber spectral region in this context by collecting Raman spectra of nucleolus, nucleus and cytoplasm from oral epithelial cancer (SCC-4) and dysplastic (DOK) cell lines and from normal oral epithelial primary cells, in vitro, in water immersion, which were then analyzed by principal components analysis as a method to discriminate the spectra. Analysis was performed before and after digital subtraction of the bulk water signal. In the normal cell line, the three subcellular regions are well differentiated before water subtraction, although the discrimination of the two nuclear regions is less well defined after water subtraction. Comparing the respective subcellular regions of the three cell lines, before water subtraction, the cell lines can be discriminated using sequential PCA and Feature Discriminant Analysis with up to ~100% sensitivity and 97% specificity for the cytoplasm, which is improved to 100% sensitivity and 99% specificity for the nucleus. The results are discussed in terms of discrimination comparing the

  11. Bayesian analysis of the effective charge from spectroscopic bremsstrahlung measurement in fusion plasmas

    Science.gov (United States)

    Krychowiak, M.; König, R.; Klinger, T.; Fischer, R.

    2004-11-01

    At the stellarator Wendelstein 7-AS (W7-AS) a spectrally resolving two channel system for the measurement of line-of-sight averaged Zeff values has been tested in preparation for its planned installation as a multichannel Zeff-profile measurement system on the stellarator Wendelstein 7-X (W7-X) which is presently under construction. The measurement is performed using the bremsstrahlung intensity in the wavelength region of ultraviolet to near infrared. The spectrally resolved measurement allows to eliminate signal contamination by line radiation. For statistical data analysis a procedure based on Bayesian probability theory has been developed. With this method it is possible to estimate the bremsstrahlung background in the measured signal and its error without the necessity to fit the spectral lines. For evaluation of the random error in Zeff the signal noise has been investigated. Furthermore, the linearity and behavior of the charge-coupled device detector at saturation has been analyzed.

  12. A vibrational spectroscopic and principal component analysis of triarylmethane dyes by comparative laboratory and portable instrumentation.

    Science.gov (United States)

    Doherty, B; Vagnini, M; Dufourmantelle, K; Sgamellotti, A; Brunetti, B; Miliani, C

    2014-01-01

    This contribution examines the utility of vibrational spectroscopy by bench and portable Raman/surface enhanced Raman and infrared methods for the investigation of ten early triarlymethane dye powder references and dye solutions applied on paper. The complementary information afforded by the techniques is shown to play a key role in the identification of specific spectral marker ranges to distiguish early synthetic dyes of art-historical interest through the elaboration of an in-house database of modern organic dyes. Chemometric analysis has permitted a separation of data by the discrimination of di-phenyl-naphthalenes and triphenylmethanes (di-amino and tri-amino derivatives). This work serves as a prelude to the validation of a non-invasive working method for in situ characterization of these synthetic dyes through a careful comparison of respective strengths and limitations of each portable technique. Copyright © 2013 Elsevier B.V. All rights reserved.

  13. Normal coordinate analysis and fungicidal activity study on anilazine and its related compound using spectroscopic techniques

    Science.gov (United States)

    Sheeja Mol, Gilbert Pushpam; Arul Dhas, Deva Dhas; Hubert Joe, Isaac; Balachandran, Sreedharan

    2016-06-01

    The FTIR and FT-Raman spectra of anilazine have been recorded in the range 400-4000 cm-1 and 50-3500 cm-1 respectively. The optimized geometrical parameters of the compound were calculated using B3LYP method with 6-311G(d,p) basis set. The distribution of the vibrational bands were carried out with the help of normal coordinate analysis (NCA). The 1H and 13C nuclear spectra have been recorded and chemical shifts of the molecule were also calculated using the gauge independent atomic orbital (GIAO) method. The UV-Visible spectrum of the compound was recorded in the region 190-900 nm and the electronic properties were determined by time-dependent DFT (TD-DFT) approach. Anilazine was screened for its antifungal activity. Molecular docking studies are conducted to predict its fungicidal activity.

  14. SpcAudace: Spectroscopic processing and analysis package of Audela software

    Science.gov (United States)

    Mauclaire, Benjamin

    2017-11-01

    SpcAudace processes long slit spectra with automated pipelines and performs astrophysical analysis of the latter data. These powerful pipelines do all the required steps in one pass: standard preprocessing, masking of bad pixels, geometric corrections, registration, optimized spectrum extraction, wavelength calibration and instrumental response computation and correction. Both high and low resolution long slit spectra are managed for stellar and non-stellar targets. Many types of publication-quality figures can be easily produced: pdf and png plots or annotated time series plots. Astrophysical quantities can be derived from individual or large amount of spectra with advanced functions: from line profile characteristics to equivalent width and periodogram. More than 300 documented functions are available and can be used into TCL scripts for automation. SpcAudace is based on Audela open source software.

  15. Raman spectroscopic analysis of human remains from a seventh century cist burial on Anglesey, UK.

    Science.gov (United States)

    Edwards, Howell G M; Wilson, Andrew S; Nik Hassan, Nik F; Davidson, Andrew; Burnett, Andrew

    2007-02-01

    Specimens from human remains exhibiting unusual preservation excavated from a seventh century stone cist burial at Towyn y Capel in Anglesey, UK, have been analysed using Raman spectroscopy with near-infrared laser excitation at 1,064 and 785 nm. Specimens of hair and bone provided evidence for severe degradation and microbial colonisation. The deposits within the stone cist showed that some microbially mediated compounds had been formed. Analysis of crystals found at the interface between the hair and the skeletal neck vertebrae revealed a mixture of newberyite and haematite, associated with decomposition products of the hair and bone. An interesting differential degradation was noted in the specimens analysed which could be related to the air-void and the presence of plant root inclusions into the stone cist. This is the first time that Raman spectroscopy has been used in the forensic archaeological evaluation of burial remains in complex and dynamic environments.

  16. Mass spectroscopic analysis of a plume induced by laser ablation of pyrolytic boron nitride

    CERN Document Server

    Chae, H B; Lee, I H; Park, S M

    1998-01-01

    The laser ablation of a pyrolytic boron nitride (pBN) target was investigated by time-of- flight quadrupole mass spectroscopy. According to the laser-correlated ion mass spectra, B sup + and B sub 2 sup + ions were produced, but neither N sup + , N sub 2 sup + , or BN sup + ions were observed at laser fluences below 1 J/cm sup 2. Instead, neutral N sub 2 molecules were found to be formed. The mean velocities and kinetic energies of the B sup + ions were obtained by time-of-flight analysis. Also, reactive laser ablation under a N sub 2 atmosphere was attempted by using a pulsed valve synchronized with the laser pulse.

  17. Using decision trees and their ensembles for analysis of NIR spectroscopic data

    DEFF Research Database (Denmark)

    Kucheryavskiy, Sergey V.

    Advanced machine learning methods, like convolutional neural networks and decision trees, became extremely popular in the last decade. This, first of all, is directly related to the current boom in Big data analysis, where traditional statistical methods are not efficient. According to the kaggle.......com — the most popular online resource for Big data problems and solutions — methods based on decision trees and their ensembles are most widely used for solving the problems. It can be noted that the decision trees and convolutional neural networks are not very popular in Chemometrics. One of the reasons...... for that is the landscape of the data matrix: the modern machine learning methods need number of measurements much larger than the number of variables to avoid overfitting, which is opposite to the layout of the data we usually deal with. Another drawback is a lack of interactive instruments for exploring...

  18. SAXS and other spectroscopic analysis of 12S cruciferin isolated from the seeds of Brassica nigra

    Science.gov (United States)

    Khaliq, Binish; Falke, Sven; Negm, Amr; Buck, Friedrich; Munawar, Aisha; Saqib, Maria; Mahmood, Seema; Ahmad, Malik Shoaib; Betzel, Christian; Akrem, Ahmed

    2017-06-01

    Oilseeds of the plant family Brassicaceae are important for providing both lipid and protein contents to human nutrition. Cruciferins (12S globulins) are seed storage proteins, which are getting attention due to their allergenic and pathogenicity related nature. This study describes the purification and characterization of a trimeric (∼190 kDa) cruciferin protein from the seeds of Brassica nigra (L.). Cruciferin was first partially purified by ammonium sulfate precipitation (30% saturation constant) and further purified by size exclusion chromatography. The N-terminal amino-acid sequence analysis showed 82% sequence homology with cruciferin from Arabidopsis thaliana. The 50-55 kDa monomeric cruciferin produced multiple bands of two major molecular weight ranges (α-polypeptides of 28-32 kDa and β-polypeptides of 17-20 kDa) under reduced conditions of SDS-PAGE. The 2D gel electrophoretic analysis showed the further separation of the bands into their isoforms with major pI ranges between 5.7 and 8.0 (α-polypeptides) and 5.5-8.5 (β-polypeptides). The Dynamic Light Scattering (DLS) showed the monodisperse nature of the cruciferin with hydrodynamic radius of 5.8 ± 0.1 nm confirming the trimeric nature of the protein. The Circular Dichroism (CD) spectra showed both α-helices and β-sheets in the native conformation of the trimeric protein. The pure cruciferin protein (40 mg/ml) was successfully crystallized; however, the crystals diffracted only to low resolution data (8 Å). Small-angle x-ray scattering (SAXS) was applied to gain insights into the three-dimensional structure in solution. SAXS showed that the radius of gyration is 4.24 ± 0.25 nm and confirmed the nearly globular shape. The SAXS based ab initio dummy model of B. nigra cruciferin was compared with 11S globulins.

  19. XANES Spectroscopic Analysis of Phosphorus Speciation in Alum-Amended Poultry Litter

    Energy Technology Data Exchange (ETDEWEB)

    Seiter,J.; Staats-Borda, K.; Ginder-Vogel, M.; Sparks, D.

    2008-01-01

    Aluminum sulfate (alum; Al2(SO4)3{center_dot}14H2O) is used as a chemical treatment of poultry litter to reduce the solubility and release of phosphate, thereby minimizing the impacts on adjacent aquatic ecosystems when poultry litter is land applied as a crop fertilizer. The objective of this study was to determine, through the use of X-ray absorption near edge structure (XANES) spectroscopy and sequential extraction, how alum amendments alter P distribution and solid-state speciation within the poultry litter system. Our results indicate that traditional sequential fractionation procedures may not account for variability in P speciation in heterogeneous animal manures. Analysis shows that NaOH-extracted P in alum amended litters is predominantly organic ({approx}80%), whereas in the control samples, >60% of NaOH-extracted P was inorganic P. Linear least squares fitting (LLSF) analysis of spectra collected of sequentially extracted litters showed that the P is present in inorganic (P sorbed on Al oxides, calcium phosphates) and organic forms (phytic acid, polyphosphates, and monoesters) in alum- and non-alum-amended poultry litter. When determining land application rates of poultry litter, all of these compounds must be considered, especially organic P. Results of the sequential extractions in conjunction with LLSF suggest that no P species is completely removed by a single extractant. Rather, there is a continuum of removal as extractant strength increases. Overall, alum-amended litters exhibited higher proportions of Al-bound P species and phytic acid, whereas untreated samples contained Ca-P minerals and organic P compounds. This study provides in situ information about P speciation in the poultry litter solid and about P availability in alum- and non-alum-treated poultry litter that will dictate P losses to ground and surface water systems.

  20. Fingerprint methods for suspended sediment transport processes by using X-ray fluorescence analysis

    Science.gov (United States)

    Nakayama, K.; Beitia, C.; Ohtsu, N.; Yamasaki, S.; Yasuyuki, M.; Yamane, M.

    2014-12-01

    Suspended sediment (SS) can have significant impacts on ecological system, and high SS concentration can have significant impacts on human life. In the previous studies, radionuclide analysis has been applied to evaluate the production of SS in the river basins, which demonstrated that the surface soil erosion can be estimated by using radionuclide Pb-210ex. However, radionuclide analysis cannot indicate the relative amounts of SS transported from each individual sub-basin to the downstream end. Thus, X-ray Fluorescence Analysis (XRF Analysis) can be considered as an alternative method to radionuclide analysis because the XRF Analysis can measure 21 chemical compositions, Na2O, MgO, Al2O3, SiO2, P2O5, SO3, Cl, K2O, CaO, TiO2, Cr2O3, MnO, Fe2O3, Co2O3, NiO, CuO, ZnO, Rb2O, SrO, BaO, and Y2O3 by using X-ray Fluorescence Analyzer. In June of 2007, high turbidity, which is more than 10,000 (NTU), was measured in the Oromushi River basin of Hokkaido in Japan. Therefore, this study aims to clarify the mechanism of the transport of SS in the Oromushi River basin. We measured chemical compositions of soil with diameter less than 63 μm in the Oromushi River basin in order to pay attention to SS by using XRF. The Principal Component Analysis revealed that SiO2, Al2O3, Fe2O3, CaO and Na2O are the dominant chemical compositions. Although the predominant composition was the same in a river basin including the downstream end, significant differences were found in the pattern of chemical compositions. Therefore, by using the chemical compositions of SiO2, Al2O3, Fe2O3, CaO and Na2O, the Mixing Stable Isotope Analysis in R model (MixSIAR) based on Bayesian statistics was applied to estimate the transportation rate of SS from each sub-basin to the downstream end, which agreed with the field experiment results very well. As a result, spatial patterns of SS transportation rate are found to be strongly related to surface soil type.

  1. Synchrotron radiation total reflection x-ray fluorescence analysis; of polymer coated silicon wafers

    International Nuclear Information System (INIS)

    Brehm, L.; Kregsamer, P.; Pianetta, P.

    2000-01-01

    It is well known that total reflection x-ray fluorescence (TXRF) provides an efficient method for analyzing trace metal contamination on silicon wafer surfaces. New polymeric materials used as interlayer dielectrics in microprocessors are applied to the surface of silicon wafers by a spin-coating process. Analysis of these polymer coated wafers present a new challenge for TXRF analysis. Polymer solutions are typically analyzed for bulk metal contamination prior to application on the wafer using inductively coupled plasma mass spectrometry (ICP-MS). Questions have arisen about how to relate results of surface contamination analysis (TXRF) of a polymer coated wafer to bulk trace analysis (ICP-MS) of the polymer solutions. Experiments were done to explore this issue using synchrotron radiation (SR) TXRF. Polymer solutions were spiked with several different concentrations of metals. These solutions were applied to silicon wafers using the normal spin-coating process. The polymer coated wafers were then measured using the SR-TXRF instrument set-up at the Stanford Synchrotron Radiation Laboratory (SSRL). Several methods of quantitation were evaluated. The best results were obtained by developing calibration curves (intensity versus ppb) using the spiked polymer coated wafers as standards. Conversion of SR-TXRF surface analysis results (atoms/cm 2 ) to a volume related concentration was also investigated. (author)

  2. High-Resolution Mass Spectroscopic Analysis of Secondary Organic Aerosol Generated by Ozonolysis of Isoprene

    Energy Technology Data Exchange (ETDEWEB)

    Nguyen, Tran B; Bateman, Adam P; Bones, David L; Nizkorodov, Serguei; Laskin, Julia; Laskin, Alexander

    2010-02-01

    The chemical composition of secondary organic aerosol (SOA) generated from the ozonolysis of isoprene (C5H8) in the presence of an OH scavenger was examined using high-resolution electrospray ionization mass spectrometry (ESI-MS). The chemical composition of SOA is complex, with more than 1000 assigned peaks observed in the positive and negative ion mode spectra. Only a small fraction of peaks corresponds to known products of isoprene oxidation, such as pyruvic acid, glycolic acid, methylglyoxal, etc. The absolute majority of the detected peaks correspond to highly oxidized oligomeric constituents of SOA, with an average O:C molar ratio of ~0.6. The corresponding organic mass (OM) to organic oxygen (OO) ratio is OM/OO ~2.4. Approximately 8% of oxygen atoms in SOA are in the form of peroxides as quantified with an iodide test. Double bond equivalency (DBE) factors, representing the sum of all double bonds and rings, increase by 1 for every 2-3 additional carbon atoms in the molecule. The prevalent oligomer building blocks are therefore carbonyls or carboxylic acids with a C2-C3 skeleton. Kendrick analysis suggests that simple aldehydes, specifically formaldehyde, acetaldehyde, and methylglyoxal can serve as monomeric building blocks in the observed oligomers. The large number of reactive functional groups, especially organic peroxides and carbonyls, suggests that isoprene/O3 SOA should be prone to chemical and photochemical aging.

  3. [FTIR Spectroscopic Analysis of Humic-Like Substances Extracted from the Microbial Residues].

    Science.gov (United States)

    Wang, Shuai; Dou, Sen; Zhang, Xi; Cui, Yan-jie; Wang, Ting

    2015-12-01

    Drived by the soil microorganisms, the decomposition and transformation of cellulose plays an important role in the formation of humic substances. The techniques of infrared spectrum combining with element analysis were adopted to compare the structural differences of humic-like substances (HLA, humic-like acid; Hu, humin) extracted from the microbial residues formed in the liquid shake-flask culture (70 days), in which the single fungi (Trichoderma viride, Penicillium and Aspergillus niger) and mixed strains participated. The results showed that: (1) The combination of two techniques could clarify the molecu- lar structure of HLA extracted from the microbial residues, however, it remained to be further discussed in terms of analyzing the structures of Hu; (2) Trichoderma viride was beneficial to the condensation of HLA extracted from its microbial residue, but Penicillium was more favorable to the degradation of HLA. (3) The oxidative degradation of HLA fractions extracted the microbial residues was implemented by Penicillium and mixed strains. Both of the mixed strains and Aspergillus niger were helpful to transfer the inorganic N compounds from the culture media into the organic N components of HLA and Hu extracted from the microbial residues, simultaneously increase their amino C contents and then provide the indispensable N source for the humification process.

  4. Spectroscopic Analysis of Heterogeneous Biocatalysts for Biodiesel Production from Expired Sunflower Cooking Oil

    Directory of Open Access Journals (Sweden)

    Enoch Wembabazi

    2015-01-01

    Full Text Available The study characterized heterogeneous biocatalyst synthesized from sucrose, saw dust, and chicken egg shells using Fourier Transform Infrared (FTIR spectroscopy coupled with Attenuated Total Reflectance (ATR technique. Acidic sulphonate (–SO3H groups were more visible in the spectrum generated for carbonized and sulphonated sucrose than in carbonized and sulphonated saw dust. This was highlighted further by the significantly higher conversion percentage achieved for sulphonated sucrose (62.5% than sulphonated saw dust (46.6% during esterification of expired sunflower oil (p=0.05. The spectra for calcinated egg shells also showed that the most active form of calcium oxide was produced at calcination temperature of 1000°C. This was confirmed in the single-step transesterification reaction in which calcium oxide generated at 1000°C yielded the highest biodiesel (87.8% from expired sunflower oil. The study further demonstrated the versatility of the FTIR technique in qualitative analysis of biodiesel and regular diesel by confirming the presence of specific characteristic peaks of diagnostic importance. These findings therefore highlight the potential of FTIR-ATR as an inexpensive, fast, and accurate diagnostic means for easy identification and characterization of different materials and products.

  5. Problems with the quantitative spectroscopic analysis of oxygen rich Czech coals

    Energy Technology Data Exchange (ETDEWEB)

    Pavlikova, H.; Machovic, V.; Cerny, J. [Inst. of Chemical Technology, Prague (Czechoslovakia); Sebestova, E. [Inst. of Rock Structure and Mechanics, Prague (Czechoslovakia)

    1995-12-01

    Solid state NMR and FTIR spectroscopies are two main methods used for the structural analysis of coals and their various products. Obtaining quantitative parameters from coals, such as arornaticity (f{sub a}) by the above mentioned methods can be a rather difficult task. Coal samples of various rank were chosen for the quantitative NMR, FTIR and EPR analyses. The aromaticity was obtained by the FTIR, {sup 13}C CP/MAS and SP/MAS NMR experiments. The content of radicals and saturation characteristics of coals were measured by EPR spectroscopy. The following problems have been discussed: 1. The relationship between the amount of free radicals (N{sub g}) and f{sub a} by NMR. 2. The f{sub a} obtained by solid state NMR and FTIR spectroscopies. 3. The differences between the f{sub a} measured by CP and SP/NMR experiments. 4. The relationship between the content of oxygen groups and the saturation responses of coals. The reliability of our results was checked by measuring the structural parameters of Argonne premium coals.

  6. Raman spectroscopic analysis of Lactobacillus rhamnosus GG in response to dehydration reveals DNA conformation changes.

    Science.gov (United States)

    Myintzu Hlaing, Mya; Wood, Bayden; McNaughton, Don; Ying, DanYan; Augustin, Mary Ann

    2017-04-01

    Dehydration of bacterial cells elicits cellular stress responses in bacteria. Microencapsulation has been used to protect cells against the environmental stress. In this study, Confocal Raman Spectroscopy was used to examine DNA changes in the chemical composition of non-encapsulated and microencapsulated Lactobacillus rhamnosus GG and the reversibility of these changes upon freeze drying and rehydration. The viability of cells upon freeze drying was also enumerated using culture methods and membrane integrity was measured using BacLight Live/Dead staining. Raman analyses show changes in the spectral features associated with various biochemical compounds, which are interpreted as the result of detrimental freeze drying effects on the bacterial cells. Specifically, analyses based on Principal Components Analysis (PCA) of Raman spectra, confirm that microencapsulation protects cells from environmental stress. The results also reveal a B- to A-like DNA conformation change in dormant cells that provided insights into the extent of reversibility of this transition upon rehydration. The extent of this reversibility is less in non-encapsulated than in microencapsulated cells. These findings indicate the potential application of Raman spectroscopy in rapid sensing of microbial dehydration stress responses. © 2017 Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim.

  7. Oxidation state of uranium in metamict and annealed zircon: near-infrared spectroscopic quantitative analysis

    CERN Document Server

    Zhang Ming; Ewing, R C

    2003-01-01

    Radiation and thermally induced changes in the oxidation state of uranium in metamict zircon have been systematically analysed, for the first time, using polarized near-infrared spectroscopy. The results showed that in damaged zircon U ions in crystalline domains exhibited relatively sharp, anisotropic signals from tetravalent and pentavalent U ions in crystalline domains (U sub c sub r sub y sub s sub t sub a sub l sup 4 sup + and U sub c sub r sub y sub s sub t sub a sub l sup 5 sup +). The linewidths and peak positions of the 4834 cm sup - sup 1 band (U sub c sub r sub y sub s sub t sub a sub l sup 4 sup + , E || c) and the 6668 cm sup - sup 1 band (U sub c sub r sub y sub s sub t sub a sub l sup 5 sup + , E perp. c) are a non-linear function of the self-radiation dose. They reach nearly constant values at doses greater than approx 3.5 x 10 sup 1 sup 8 alpha-events g sup - sup 1. Quantitative analysis of U sub c sub r sub y sub s sub t sub a sub l sup 4 sup + and U sub c sub r sub y sub s sub t sub a sub l...

  8. Spectroscopic ellipsometry for analysis of polycrystalline thin-film photovoltaic devices and prediction of external quantum efficiency

    Science.gov (United States)

    Ibdah, Abdel-Rahman; Koirala, Prakash; Aryal, Puruswottam; Pradhan, Puja; Marsillac, Sylvain; Rockett, Angus A.; Podraza, Nikolas J.; Collins, Robert W.

    2017-11-01

    Complete polycrystalline thin-film photovoltaic (PV) devices employing CuIn1-xGaxSe2/CdS and CdS/CdTe heterojunctions have been studied by ex situ spectroscopic ellipsometry (SE). In this study, layer thicknesses have been extracted along with photon energy independent parameters such as compositions that describe the dielectric function spectra ε(E) of the individual layers. For accurate ex situ SE analysis of these PV devices, a database of ε(E) spectra is required for all thin film component materials used in each of the two absorber technologies. When possible, database measurements are performed by applying SE in situ immediately after deposition of the thin film materials and after cooling to room temperature in order to avoid oxidation and surface contamination. Determination of ε(E) from the resulting in situ SE data requires structural information that can be obtained from analysis of SE data acquired in real time during the deposition process. From the results of ex situ analysis of the complete CuIn1-xGaxSe2 (CIGS) and CdTe PV devices, the deduced layer thicknesses in combination with the parameters describing ε(E) can be employed in further studies that simulate the external quantum efficiency (EQE) spectra of the devices. These simulations have been performed here by assuming that all electron-hole pairs generated within the active layers, i.e. layers incorporating a dominant absorber component (either CIGS or CdTe), are separated and collected. The active layers may include not only the bulk absorber but also window and back contact interface layers, and individual current contributions from these layers have been determined in the simulations. In addition, the ex situ SE analysis results enable calculation of the absorbance spectra for the inactive layers and the overall reflectance spectra, which lead to quantification of all optical losses in terms of a current density deficit. Mapping SE can be performed given the high speed of multichannel

  9. Oral cancer detection based on fluorescence polarization of blood plasma at excitation wavelength 405 nm

    Science.gov (United States)

    Pachaiappan, Rekha; Prakasarao, Aruna; Manoharan, Yuvaraj; Dornadula, Koteeswaran; Singaravelu, Ganesan

    2017-02-01

    During metabolism the metabolites such as hormones, proteins and enzymes were released in to the blood stream by the cells. These metabolites reflect any change that occurs due to any disturbances in normal metabolic function of the human system. This was well observed with the altered spectral signatures observed with fluorescence spectroscopic technique. Previously many have reported on the significance of native fluorescence spectroscopic method in the diagnosis of cancer. As fluorescence spectroscopy is sensitive and simple, it has complementary techniques such as excitation-emission matrix, synchronous and polarization. The fluorescence polarization measurement provides details about any association or binding reactions and denaturing effects that occurs due to change in the micro environment of cells and tissues. In this study, we have made an attempt in the diagnosis of oral cancer at 405 nm excitation using fluorescence polarization measurement. The fluorescence anisotropic values calculated from polarized fluorescence spectral data of normal and oral cancer subjects yielded a good accuracy when analyzed with linear discriminant analysis based artificial neural network. The results will be discussed in detail.

  10. Structure and composition analysis of natural gas hydrates: 13C NMR spectroscopic and gas uptake measurements of mixed gas hydrates.

    Science.gov (United States)

    Seo, Yutaek; Kang, Seong-Pil; Jang, Wonho

    2009-09-03

    Gas hydrates are becoming an attractive way of storing and transporting large quantities of natural gas, although there has been little effort to understand the preferential occupation of heavy hydrocarbon molecules in hydrate cages. In this work, we present the formation kinetics of mixed hydrate based on a gas uptake measurement during hydrate formation, and how the compositions of the hydrate phase are varied under corresponding formation conditions. We also examine the effect of silica gel pores on the physical properties of mixed hydrate, including thermodynamic equilibrium, formation kinetics, and hydrate compositions. It is expected that the enclathration of ethane and propane is faster than that of methane early stage hydrate formation, and later methane becomes the dominant component to be enclathrated due to depletion of heavy hydrocarbons in the vapor phase. The composition of the hydrate phase seems to be affected by the consumed amount of natural gas, which results in a variation of heating value of retrieved gas from mixed hydrates as a function of formation temperature. 13C NMR experiments were used to measure the distribution of hydrocarbon molecules over the cages of hydrate structure when it forms either from bulk water or water in silica gel pores. We confirm that 70% of large cages of mixed hydrate are occupied by methane molecules when it forms from bulk water; however, only 19% of large cages of mixed hydrate are occupied by methane molecules when it forms from water in silica gel pores. This result indicates that the fractionation of the hydrate phase with heavy hydrocarbon molecules is enhanced in silica gel pores. In addition when heavy hydrocarbon molecules are depleted in the vapor phase during the formation of mixed hydrate, structure I methane hydrate forms instead of structure II mixed hydrate and both structures coexist together, which is also confirmed by 13C NMR spectroscopic analysis.

  11. DFT computation and spectroscopic analysis of N-(p-methoxybenzylidene)aniline, a potentially useful NLO material

    Science.gov (United States)

    Balachandran, V.; Santhi, G.; Karpagam, V.; Lakshmi, A.

    2013-09-01

    FT-Raman and IR spectra of the biologically active molecule N-(p-methoxybenzylidene)aniline (NpMBA) have been recorded and analyzed. The molecular geometry of the title compound in the ground state have been calculated by density functional theory (DFT) with 6-31+G(d) and 6-311++G(d, p) basis sets. The harmonic vibrational frequencies calculated for NpMBA at B3LYP level using higher basis set 6-311++G(d, p). There are four conformers, C1, C2, C3 and C4 for this molecule. The computational results diagnose the most stable conformer of NpMBA as the C4 form. In order to obtain the information about the influence of intramolecular interaction on the molecule the calculated geometries of NpMBA molecule was compared with experimental data. The results of the optimized molecular structure gave clear evidence for the intramolecular charge transfer (ICT). The electric dipole moment (μ) and first hyper polarizability (β) values of the investigated molecule were computed using density functional theory calculations. The calculated results also show that the NpMBA molecule might have microscopic non-linear optical (NLO) behavior with non-zero values. The effects of methoxy and central bond substituent in benzene ring in the vibrational wave numbers have been analyzed. NBO analysis is useful to understand the intra molecular hyper conjugative interaction between lone pair N and σ*(Csbnd C) bond orbital. The overlapping of atomic orbitals along with their predicted energy is explained on the basis of HOMO-LUMO energy gap calculations. The MEP surface and thermodynamic parameters are also predicted.

  12. Application of comparative vibrational spectroscopic and mechanistic studies in analysis of fisetin structure

    Science.gov (United States)

    Dimitrić Marković, Jasmina M.; Marković, Zoran S.; Milenković, Dejan; Jeremić, Svetlana

    2011-12-01

    This paper addresses experimental and theoretical research in fisetin (2-(3,4-dihydroxyphenyl)-3,7-dihydroxychromen-4-one) structure by means of experimental IR and Raman spectroscopies and mechanistic calculations. Density Functional Theory calculations, with M05-2X functional and the 6-311+G (2df, p) basis set implemented in the Gaussian 09 package, are performed with the aim to support molecular structure, vibrational bands' positions and their intensities. Potential energy distribution (PED) values and the description of the largest vibrational contributions to the normal modes are calculated. The most intense bands appear in the 1650-1500 cm -1 wavenumber region. This region involves a combination of the C dbnd O, C2 dbnd C3 and C-C stretching vibrational modes. Most of the bands in the 1500-1000 cm -1 range involve C-C stretching, O-C stretching and in-plane C-C-H, C-O-H, C-C-O and C-C-C bending vibrations of the rings. The region below 1000 cm -1 is characteristic to the combination of in plane C-C-C-H, H-C-C-H, C-C-C-C, C-C-O-C and out of plane O-C-C-C, C-C-O-C, C-C-C-C torsional modes. The Raman spectra of baicalein and quercetin were used for qualitative comparison with fisetin spectrum and verification of band assignments. The applied detailed vibrational spectral analysis and the assignments of the bands, proposed on the basis of fundamentals, reproduced the experimental results with high degree of accuracy.

  13. a Combined Molecular Dynamics and NMR Spectroscopic Protocol for the Conformational Analysis of Oligosaccharides.

    Science.gov (United States)

    Varma, Vikram

    A combined experimental and theoretical protocol for the conformational analysis of oligosaccharides is presented. Three disaccharides, methyl alpha - scD-mannopyranosyl-(1 to 3)-alpha- scD-mannopyranoside, methyl beta- scD-galactopyranosyl-(1 to 4)-beta- scD-glucopyranoside, and propyl beta- scD-2-acetamido -2-deoxy glucopyranosyl-(1 to 3)- alpha- scL-rhamnopyranoside, are used to evaluate a protocol for conformational analysis that makes use of molecular dynamics calculations with the CHARMM force field. Dynamics trajectories computed in vacuo and in water are used to calculate time-averaged NMR parameters such as spin-lattice relaxation times (T_1 ), Nuclear Overhauser Enhancements (NOE), and heteronuclear spin-spin coupling constants (^3J _{rm CH}). The calculated NMR parameters are then compared to experimental values and used to evaluate the computational procedure. The energetically accessible conformations are effectively sampled by the simulations. The method has been extended to the conformational analysis of higher-order oligosaccharides corresponding to the cell-wall polysaccharide of the Streptococcus Group A, and the Shigella flexneri Y O-antigen. The Streptococcus Group A cell-wall polysaccharide is comprised of a backbone of rhamnopyranosyl units connected by alternating alpha- scL-(1 to 3) and alpha- scL -(1 to 2) linkages, to which are attached N-acetyl-beta- scD-glucosamine ( beta- scD-GlcpNAc) residues at the 3 positions of the rhamnose backbone.rm A&rm B^'qquad A^'& rm Bqquad Acr[{-alpha}{-}L{-}Rha {it p}{-}(1to2){-alpha }{-}L{-}Rha{it p} {-}(1to3){-alpha}{ -}L{-}Rha{it p}-(1to2) -alpha-L-Rha{it p}{-}(1 to3){-alpha}{-}L{- }Rha{it p}{-}cr&uparrow(1 to3)&uparrow(1to3)crbeta {-}D{-}&rm Glc{it p }NAcqquadbeta{-}D{-}& rm Glc{it p}NAccr&rm C ^'&rm C] A branched trisaccharide (A^' -(C)B), a tetrasaccharide (A^' -(C)B-A), a pentasaccharide (C^' -B^'-A ^'-(C)B), and two hexasaccharides (C^'-B^ '-A^' -(C)B-A) and (A-(C^')B ^'-A^' -(C)B), have been chosen

  14. X-ray fluorescence analysis of wear metals in used lubricating oils

    Science.gov (United States)

    Maddox, W. E.; Kelliher, W. C.

    1986-01-01

    Used oils from several aircraft at NASA's Langley Research Center were analyzed over a three year period using X-ray fluorescence (XRF) and atomic emission spectrometry. The results of both analyses are presented and comparisons are made. Fe and Cu data for oil from four internal combustion engines are provided and XRF and atomic emission spectrometry measurements were found to be in perfect agreement. However, distributions were found in the case of oil from a jet aircraft engine whereby the latter method gave values for total iron concentration in the oil and did not distinguish between suspended particles and oil additives. XRF does not have these particle-size limitations; moreover, it is a faster process. It is concluded that XRF is the preferred method in the construction of a man-portable oil wear analysis instrument.

  15. Metals determination in wood treated by synchrotron radiation X-ray fluorescence analysis

    Energy Technology Data Exchange (ETDEWEB)

    Vives, Ana Elisa Sirito de [Universidade Metodista de Piracicaba (UNIMEP), Santa Barbara D' Oeste, SP (Brazil). Faculdade de Engenharia, Arquitetura e Urbanismo]. E-mail: aesvives@unimep.br; Silva, Richard Maximiliano da Cunha [Centro de Energia Nuclear na Agricultura, Piracicaba, SP (Brazil)]. E-mail: maxcunha@cena.usp.br; Medeiros, Jean Gabriel da Silva; Tomazello Filho, Mario [Sao Paulo Univ., Piracicaba, SP (Brazil). Escola Superior de Agricultura Luiz de Queiroz]. E-mail: jeangm@esalq.usp.br; mtomazel@esalq.usp.br; Moreira, Silvana [Universidade Estadual de Campinas, SP (Brazil). Faculdade de Engenharia Civil, Arquitetura e Urbanismo]. E-mail: Silvana@fec.unicamp.br; Zucchi, Orgheda Luiza Araujo Domingues [Sao Paulo Univ., Ribeirao Preto, SP (Brazil). Faculdade de Ciencias Farmaceuticas]. E-mail: olzucchi@fcfrp.usp.br; Barroso, Regina Cely [Universidade do Estado, Rio de Janeiro, RJ (Brazil)]. E-mail: cely@uerj.br

    2005-07-01

    The paper describes the use of X-Ray fluorescence analysis for distribution and quantification of metals in the hardwood (Eucalyptus sp) and softwood (Pinus sp) treated with CCA (copper-chromium-arsenic). The sapwood/heartwood for hardwood sample and the growth-rings for softwood sample were analyzed. The samples were scanned in 320 mm steps in the vertical direction. For excitation of the elements a white beam synchrotron radiation of {approx} 320 x 180 mm was employed and for the X-ray detection a Si(Li) semiconductor detector. The elements K, Ca, Cr, Mn, Cu, Zn and As were determined. Fundamental parameters were used to quantify the elements concentrations. (author)

  16. Metals determination in coffee sample by total reflection X-ray fluorescence analysis (TXRF)

    Energy Technology Data Exchange (ETDEWEB)

    Vives, Ana Elisa Sirito de [Universidade Metodista de Piracicaba (UNIMEP), Santa Barbara D' Oeste, SP (Brazil). Faculdade de Engenharia, Arquitetura e Urbanismo]. E-mail: aesvives@unimep.br; Moreira, Silvana [Universidade Estadual de Campinas, SP (Brazil). Faculdade de Engenharia Civil, Arquitetura e Urbanismo]. E-mail: Silvana@fec.unicamp.br; Brienza, Sandra Maria Boscolo [ Universidade Metodista de Piracicaba (UNIMEP), Piracicaba, SP (Brazil). Faculdade de Ciencias Matematicas, da Natureza e de Tecnologia da Informacao]. E-mail: sbrienza@unimep.br; Zucchi, Orgheda Luiza Araujo Domingues [Sao Paulo Univ., Ribeirao Preto, SP (Brazil). Faculdade de Ciencias Farmaceuticas]. E-mail: olzucchi@fcfrp.usp.br; Nascimento Filho, Virgilio Franco do [Centro de Energia Nuclear na Agricultura (CENA), Piracicaba, SP (Brazil)]. E-mail: virgilio@cena.usp.br

    2005-07-01

    The objective of this study was to evaluate the inorganic concentration in five brands of coffee, three of them nationally marketed and the others of an exportation kind. The samples were prepared by infusion with deionized water. To carry out the calibration, standard solutions were prepared with different concentrations of Al, Si, K, Ca, Ti, Cr, Fe, Ni, Zn and Se. The measurements were carried out using a white beam of synchrotron radiation for excitation and a Si (Li) semiconductor detector for detection. By employing Synchrotron Radiation Total Reflection X-Ray Fluorescence Analysis (SR-TXRF) it was possible to evaluate the concentrations of P, S, Cl, K, Ca, Mn, Fe, Cu, Zn, Rb and Ba. The detection limits for 300 s counting time were in the range of 0.03 (Ca) to 30 ng.g{sup -1} (Rb), respectively. (author)

  17. Metals determination in wood treated by synchrotron radiation X-ray fluorescence analysis

    International Nuclear Information System (INIS)

    Vives, Ana Elisa Sirito de; Medeiros, Jean Gabriel da Silva; Tomazello Filho, Mario

    2005-01-01

    The paper describes the use of X-Ray fluorescence analysis for distribution and quantification of metals in the hardwood (Eucalyptus sp) and softwood (Pinus sp) treated with CCA (copper-chromium-arsenic). The sapwood/heartwood for hardwood sample and the growth-rings for softwood sample were analyzed. The samples were scanned in 320 mm steps in the vertical direction. For excitation of the elements a white beam synchrotron radiation of ∼ 320 x 180 mm was employed and for the X-ray detection a Si(Li) semiconductor detector. The elements K, Ca, Cr, Mn, Cu, Zn and As were determined. Fundamental parameters were used to quantify the elements concentrations. (author)

  18. Metals determination in coffee sample by total reflection X-ray fluorescence analysis (TXRF)

    International Nuclear Information System (INIS)

    Vives, Ana Elisa Sirito de

    2005-01-01

    The objective of this study was to evaluate the inorganic concentration in five brands of coffee, three of them nationally marketed and the others of an exportation kind. The samples were prepared by infusion with deionized water. To carry out the calibration, standard solutions were prepared with different concentrations of Al, Si, K, Ca, Ti, Cr, Fe, Ni, Zn and Se. The measurements were carried out using a white beam of synchrotron radiation for excitation and a Si (Li) semiconductor detector for detection. By employing Synchrotron Radiation Total Reflection X-Ray Fluorescence Analysis (SR-TXRF) it was possible to evaluate the concentrations of P, S, Cl, K, Ca, Mn, Fe, Cu, Zn, Rb and Ba. The detection limits for 300 s counting time were in the range of 0.03 (Ca) to 30 ng.g -1 (Rb), respectively. (author)

  19. Possible use of pattern recognition for the analysis of Mars rover X-ray fluorescence spectra

    Science.gov (United States)

    Yin, Lo I; Trombka, Jacob I.; Seltzer, Stephen M.; Johnson, Robert G.; Philpotts, John A.

    1989-01-01

    On the Mars rover sample-return mission, the rover vehicle will collect and select samples from different locations on the Martian surface to be brought back to earth for laboratory studies. It is anticipated that an in situ energy-dispersive X-ray fluorescence (XRF) spectrometer will be on board the rover. On such a mission, sample selection is of higher priority than in situ quantitative chemical anlaysis. With this in mind, a pattern recognition technique is proposed as a simple, direct, and speedy alternative to detailed chemical analysis of the XRF spectra. The validity and efficacy of the pattern recognition technique are demonstrated by the analyses of laboratory XRF spectra obtained from a series of geological samples, in the form both of standardized pressed pellets and as unprepared rocks. It is found that pattern recognition techniques applied to the raw XRF spectra can provide for the same discrimination among samples as a knowledge of their actual chemical composition.

  20. Inorganic chemical investigation by X-ray fluorescence analysis - The Viking Mars Lander

    Science.gov (United States)

    Toulmin, P., III; Rose, H. J., Jr.; Baird, A. K.; Clark, B. C.; Keil, K.

    1973-01-01

    The inorganic chemical investigation experiment added in August 1972 to the Viking Lander scientific package uses an energy-dispersive X-ray fluorescence spectrometer in which four sealed, gas-filled proportional counters detect X-rays emitted from samples of the Martian surface materials irradiated by X-rays from radioisotope sources (Fe-55 and Cd-109). The instrument is inside the Lander body, and samples are to be delivered to it by the Viking Lander Surface Sampler. Instrument design is described along with details of the data processing and analysis procedures. The results of the investigation will characterize the surface materials of Mars as to elemental composition with accuracies ranging from a few tens of parts per million (at the trace-element level) to a few per cent (for major elements) depending on the element in question.