WorldWideScience

Sample records for fish populations prior

  1. Importance of benthic production to fish populations in Lake Mead prior to the establishment of quagga mussels

    Science.gov (United States)

    Umek, John; Chandra, Sudeep; Rosen, Michael; Wittmann, Marion; Sullivan, Joe; Orsak, Erik

    2010-01-01

    Limnologists recently have developed an interest in quantifying benthic resource contributions to higher-level consumers. Much of this research focuses on natural lakes with very little research in reservoirs. In this study, we provide a contemporary snapshot of the food web structure of Lake Mead to evaluate the contribution of benthic resources to fish consumers. In addition, we document the available food to fishes on soft sediments and changes to the invertebrate community over 2 time periods. Benthic invertebrate food availability for fishes is greater in Las Vegas Bay than Overton Arm. Las Vegas Bay is dominated by oligochaetes, whose biomass increased with depth, while Overton Arm is dominated by chironomids, whose biomass did not change with depth. Diet and isotopic measurements indicate the fish community largely relies on benthic resources regardless of basin (Las Vegas Bay >80%; Overton Arm >92%); however, the threadfin shad likely contribute more to largemouth and striped bass production in Overton Arm versus Las Vegas Bay. A 2-time period analysis, pre and post quagga mussel establishment and during lake level declines, suggests there is no change in the density of benthic invertebrates in Boulder Basin, but there were greater abundances of select taxa in this basin by season and depth than in other basins. Given the potential of alterations as a result of the expansion of quagga mussel and the reliance of the fishery on benthic resources, future investigation of basin specific, benthic processes is recommended.

  2. Fish population dynamics

    National Research Council Canada - National Science Library

    Gulland, J. A

    1977-01-01

    This book describes how the dynamics of fish populations can be analysed in terms of the factors affecting their rates of growth, mortality and reproduction, with particular emphasis on the effects of fishing...

  3. Fish population and habitat analysis in Buck Creek, Washington, prior to recolonization by anadromous salmonids after the removal of Condit Dam

    Science.gov (United States)

    Allen, M. Brady; Burkhardt, Jeanette; Munz, Carrie; Connolly, Patrick J.

    2012-01-01

    We assessed the physical and biotic conditions in the part of Buck Creek, Washington, potentially accessible to anadromous fishes. This creek is a major tributary to the White Salmon River upstream of Condit Dam, which was breached in October 2011. Habitat and fish populations were characterized in four stream reaches. Reach breaks were based on stream gradient, water withdrawals, and fish barriers. Buck Creek generally was confined, with a single straight channel and low sinuosity. Boulders and cobble were the dominant stream substrate, with limited gravel available for spawning. Large-cobble riffles were 83 percent of the available fish habitat. Pools, comprising 15 percent of the surface area, mostly were formed by bedrock with little instream cover and low complexity. Instream wood averaged 6—10 pieces per 100 meters, 80 percent of which was less than 50 centimeters in diameter. Water temperature in Buck Creek rarely exceeded 16 degrees Celsius and did so for only 1 day at river kilometer (rkm) 3 and 11 days at rkm 0.2 in late July and early August 2009. The maximum temperature recorded was 17.2 degrees Celsius at rkm 0.2 on August 2, 2009. Minimum summer discharge in Buck Creek was 3.3 cubic feet per second downstream of an irrigation diversion (rkm 3.1) and 7.7 cubic feet per second at its confluence with the White Salmon River. Rainbow trout (Oncorhynchus mykiss) was the dominant fish species in all reaches. The abundance of age-1 or older rainbow trout was similar between reaches. However, in 2009 and 2010, the greatest abundance of age-0 rainbow trout (8 fish per meter) was in the most downstream reach. These analyses in Buck Creek are important for understanding the factors that may limit fish abundance and productivity, and they will help identify and prioritize potential restoration actions. The data collected constitute baseline information of pre-dam removal conditions that will allow assessment of changes in fish populations now that Condit Dam has

  4. Fish populations in Plynlimon streams

    Directory of Open Access Journals (Sweden)

    D. T. Crisp

    1997-01-01

    Full Text Available In Plynlimon streams, brown trout (Salmo trutta L. are widespread in the upper Wye at population densities of 0.03 to 0.32 fish m-2 and show evidence of successful recruitment in most years. In the upper Severn, brown trout are found only in an area of c. 1670 -2 downstream of Blaenhafren Falls at densities of 0.03 to 0.24 fish -2 and the evidence suggests very variable year to year success in recruitment (Crisp & Beaumont, 1996. Analyses of the data show that temperature differences between afforested and unafforested streams may affect the rates of trout incubation and growth but are not likely to influence species survival. Simple analyses of stream discharge data suggest, but do not prove, that good years for recruitment in the Hafren population were years of low stream discharge. This may be linked to groundwater inputs detected in other studies in this stream. More research is needed to explain the survival of the apparently isolated trout population in the Hafren.

  5. Impact of entrainment and impingement on fish populations in the Hudson River estuary. Volume III. An analysis of the validity of the utilities' stock-recruitment curve-fitting exercise and prior estimation of beta technique. Environmental Sciences Division publication No. 1792

    International Nuclear Information System (INIS)

    Christensen, S.W.; Goodyear, C.P.; Kirk, B.L.

    1982-03-01

    This report addresses the validity of the utilities' use of the Ricker stock-recruitment model to extrapolate the combined entrainment-impingement losses of young fish to reductions in the equilibrium population size of adult fish. In our testimony, a methodology was developed and applied to address a single fundamental question: if the Ricker model really did apply to the Hudson River striped bass population, could the utilities' estimates, based on curve-fitting, of the parameter alpha (which controls the impact) be considered reliable. In addition, an analysis is included of the efficacy of an alternative means of estimating alpha, termed the technique of prior estimation of beta (used by the utilities in a report prepared for regulatory hearings on the Cornwall Pumped Storage Project). This validation methodology should also be useful in evaluating inferences drawn in the literature from fits of stock-recruitment models to data obtained from other fish stocks

  6. Population structure and adaptation in fishes

    DEFF Research Database (Denmark)

    Limborg, Morten

    Marine fishes represent a valuable resource for the global economy and food consumption. Accordingly, many species experience high levels of exploitation necessitating effective management plans. However, long term sustainability may be jeopardized from insufficient knowledge about intra-specific......Marine fishes represent a valuable resource for the global economy and food consumption. Accordingly, many species experience high levels of exploitation necessitating effective management plans. However, long term sustainability may be jeopardized from insufficient knowledge about intra......-specific population structure and adaptive divergence. The large population sizes and high migration rates common to most marine fishes impede the differentiating effect of genetic drift, having led to expectations of no population structure and that the occurrence of local adaptation should be rare in these species....... Comprehensive genetic analyses on the small pelagic fish European sprat (Sprattus sprattus) revealed significant population structure throughout its distribution with an overall pattern of reduced connectivity across environmental transition zones. Population structure reflected both historical separations over...

  7. Methodological issues affecting the study of fish parasites. I. Duration of live fish storage prior to dissection.

    Science.gov (United States)

    Kvach, Yuriy; Ondračková, Markéta; Janáč, Michal; Jurajda, Pavel

    2016-05-03

    We tested the ability of parasite species to respond quickly to artificial conditions (e.g. by changing abundance or even decreasing to extinction) while host fish species were being held alive prior to dissection. Prussian carp Carassius gibelio were sampled by electrofishing from 2 ponds alongside the River Dyje (Czech Republic) during 'cold' and 'warm' seasons. All fish were transported to the laboratory in aerated pond water and kept in a 1 m3 outdoor basin with aged tap water for 6 d. Twenty fish were dissected on consecutive days (total 120 fish for each site). Our results indicated that there was little change in parasite loading over the first 3 d of holding, suggesting no impact on parasitological studies undertaken over this period. From the fourth day, however, overall parasite abundance increased due to rapid reproduction of some parasite species, especially gyrodactylids in the cold season and dactylogyrids in the warm season. Parasite diversity appeared less stable in the warm season, with significant differences being registered as early as the second day. In addition to holding period, environmental conditions during fish holding will also play an important role in parasite community shifts.

  8. On the dynamics of exploited fish populations

    National Research Council Canada - National Science Library

    Beverton, R. J. H; Holt, Sidney J

    1993-01-01

    ...-brooding cichlids, and viviparity in many sharks and toothcarps. Moreover, fish are of considerable importance to the survival of the human species in the form of nutritious, delicious and diverse food. Rational exploitation and management of our global stocks of fishes must rely upon a detailed and precise insight of their biology. The...

  9. Will Tidal Wetland Restoration Enhance Populations of Native Fishes?

    Directory of Open Access Journals (Sweden)

    Larry R. Brown

    2003-10-01

    Full Text Available Restoration of tidal wetlands might enhance populations of native fishes in the San Francisco Estuary of California. The purpose of this paper is to: (1 review the currently available information regarding the importance of tidal wetlands to native fishes in the San Francisco Estuary, (2 construct conceptual models on the basis of available information, (3 identify key areas of scientific uncertainty, and (4 identify methods to improve conceptual models and reduce uncertainty. There are few quantitative data to suggest that restoration of tidal wetlands will substantially increase populations of native fishes. On a qualitative basis, there is some support for the idea that tidal wetland restoration will increase populations of some native fishes; however, the species deriving the most benefit from restoration might not be of great management concern at present. Invasion of the San Francisco Estuary by alien plants and animals appears to be a major factor in obscuring the expected link between tidal wetlands and native fishes. Large-scale adaptive management experiments (>100 hectares appear to be the best available option for determining whether tidal wetlands will provide significant benefit to native fishes. Even if these experiments are unsuccessful at increasing native fish populations, the restored wetlands should benefit native birds, plants, and other organisms.

  10. Fishes in a changing world: learning from the past to promote sustainability of fish populations.

    Science.gov (United States)

    Gordon, T A C; Harding, H R; Clever, F K; Davidson, I K; Davison, W; Montgomery, D W; Weatherhead, R C; Windsor, F M; Armstrong, J D; Bardonnet, A; Bergman, E; Britton, J R; Côté, I M; D'agostino, D; Greenberg, L A; Harborne, A R; Kahilainen, K K; Metcalfe, N B; Mills, S C; Milner, N J; Mittermayer, F H; Montorio, L; Nedelec, S L; Prokkola, J M; Rutterford, L A; Salvanes, A G V; Simpson, S D; Vainikka, A; Pinnegar, J K; Santos, E M

    2018-03-01

    Populations of fishes provide valuable services for billions of people, but face diverse and interacting threats that jeopardize their sustainability. Human population growth and intensifying resource use for food, water, energy and goods are compromising fish populations through a variety of mechanisms, including overfishing, habitat degradation and declines in water quality. The important challenges raised by these issues have been recognized and have led to considerable advances over past decades in managing and mitigating threats to fishes worldwide. In this review, we identify the major threats faced by fish populations alongside recent advances that are helping to address these issues. There are very significant efforts worldwide directed towards ensuring a sustainable future for the world's fishes and fisheries and those who rely on them. Although considerable challenges remain, by drawing attention to successful mitigation of threats to fish and fisheries we hope to provide the encouragement and direction that will allow these challenges to be overcome in the future. © 2018 The Authors. Journal of Fish Biology published by John Wiley & Sons Ltd on behalf of The Fisheries Society of the British Isles.

  11. Quantifying relative fishing impact on fish populations based on spatio-temporal overlap of fishing effort and stock density

    DEFF Research Database (Denmark)

    Vinther, Morten; Eero, Margit

    2013-01-01

    Evaluations of the effects of management measures on fish populations are usually based on the analyses of population dynamics and estimates of fishing mortality from stock assessments. However, this approach may not be applicable in all cases, in particular for data-limited stocks, which may...... GAM analyses to predict local cod densities and combine this with spatio-temporal data of fishing effort based on VMS (Vessel Monitoring System). To quantify local fishing impact on the stock, retention probability of the gears is taken into account. The results indicate a substantial decline...... in the impact of the Danish demersal trawl fleet on cod in the Kattegat in recent years, due to a combination of closed areas, introduction of selective gears and changes in overall effort....

  12. Population connectivity of an overexploited coastal fish ...

    African Journals Online (AJOL)

    Sciaenidae), in an ocean-warming hotspot. ... in this global hotspot of seawater temperature changes. Keywords: Angola–Benguela Frontal Zone, climate change, demographic history, marine fisheries, molecular ecology, population structure ...

  13. Effects of fire on fish populations: Landscape perspectives on persistance of native fishes and nonnative fish invasions

    Science.gov (United States)

    Dunham, J.B.; Young, M.; Gresswell, Robert E.; Rieman, B.

    2003-01-01

    Our limited understanding of the short and long-term effects of fire on fish contributes to considerable uncertainty in assessments of the risks and benefits of fire management alternatives. A primary concern among the many potential effects of fire is the effects of fire and fire management on persistence of native fish populations. Limited evidence suggests vulnerability of fish to fire is contingent upon the quality of affected habitats, the amount and distribution of habitat (habitat fragmentation), and habitat specificity of the species in question. Species with narrow habitat requirements in highly degraded and fragmented systems are likely to be most vulnerable to fire and fire-related disturbance. In addition to effects of fire on native fish, there are growing concerns about the effects of fire on nonnative fish invasions. The role of fire in facilitating invasions by nonnative fishes is unknown, but experience with other species suggests some forms of disturbance associated with fire may facilitate invasion. Management efforts to promote persistence of fishes in fire-prone landscapes can take the form of four basic alternatives: (1) pre-fire management; (2) post-fire management; (3) managing fire itself (e.g. fire fighting); and (4) monitoring and adaptive management. Among these alternatives, pre-fire management is likely to be most effective. Effective pre-fire management activities will address factors that may render fish populations more vulnerable to the effects of fire (e.g. habitat degradation, fragmentation, and nonnative species). Post-fire management is also potentially important, but suffers from being a reactive approach that may not address threats in time to avert them. Managing fire itself can be important in some contexts, but negative consequences for fish populations are possible (e.g. toxicity of fire fighting chemicals to fish). Monitoring and adaptive management can provide important new information for evaluating alternatives, but

  14. Effects of human population density and proximity to markets on coral reef fishes vulnerable to extinction by fishing.

    Science.gov (United States)

    Brewer, T D; Cinner, J E; Green, A; Pressey, R L

    2013-06-01

    Coral reef fisheries are crucial to the livelihoods of tens of millions of people; yet, widespread habitat degradation and unsustainable fishing are causing severe depletion of stocks of reef fish. Understanding how social and economic factors, such as human population density, access to external markets, and modernization interact with fishing and habitat degradation to affect fish stocks is vital to sustainable management of coral reef fisheries. We used fish survey data, national social and economic data, and path analyses to assess whether these factors explain variation in biomass of coral reef fishes among 25 sites in Solomon Islands. We categorized fishes into 3 groups on the basis of life-history characteristics associated with vulnerability to extinction by fishing (high, medium, and low vulnerability). The biomass of fish with low vulnerability was positively related to habitat condition. The biomass of fishes with high vulnerability was negatively related to fishing conducted with efficient gear. Use of efficient gear, in turn, was strongly and positively related to both population density and market proximity. This result suggests local population pressure and external markets have additive negative effects on vulnerable reef fish. Biomass of the fish of medium vulnerability was not explained by fishing intensity or habitat condition, which suggests these species may be relatively resilient to both habitat degradation and fishing. © 2012 Society for Conservation Biology.

  15. Methodological issues affecting the study of fish parasites. I. Duration of live fish storage prior to dissection

    Czech Academy of Sciences Publication Activity Database

    Kvach, Yuriy; Ondračková, Markéta; Janáč, Michal; Jurajda, Pavel

    2016-01-01

    Roč. 119, č. 2 (2016), s. 107-115 ISSN 0177-5103 R&D Projects: GA ČR GBP505/12/G112 Institutional support: RVO:68081766 Keywords : Parasite community * Temporal changes * Carassius gibelio * Fish holding * Methodology * Parasitological examination Subject RIV: EG - Zoology Impact factor: 1.549, year: 2016

  16. Population genomics of marine fishes: next generation prospects and challenges

    DEFF Research Database (Denmark)

    Hansen, Jakob Hemmer; Therkildsen, Nina Overgaard; Pujolar, J.M.

    2014-01-01

    Over the past few years, technological advances have facilitated giant leaps forward in our ability to generate genome-wide molecular data, offering exciting opportunities for gaining new insights into the ecology and evolution of species where genomic information is still limited. Marine fishes...... time scales, identifying genomic signatures associated with population divergence under gene flow, and determining the genetic basis of phenotypic traits. We also consider future challenges pertaining to the implementation of genome-wide coverage through next-generation sequencing and genotyping...... methods in marine fishes. Complications associated with fast decay of linkage disequilibrium, as expected for species with large effective population sizes, and the possibility that adaptation is associated with both soft selective sweeps and polygenic selection, leaving complex genomic signatures...

  17. Coral reef fish populations can persist without immigration

    KAUST Repository

    Salles, Océane C.

    2015-11-18

    Determining the conditions under which populations may persist requires accurate estimates of demographic parameters, including immigration, local reproductive success, and mortality rates. In marine populations, empirical estimates of these parameters are rare, due at least in part to the pelagic dispersal stage common to most marine organisms. Here, we evaluate population persistence and turnover for a population of orange clownfish, Amphiprion percula, at Kimbe Island in Papua New Guinea. All fish in the population were sampled and genotyped on five occasions at 2-year intervals spanning eight years. The genetic data enabled estimates of reproductive success retained in the same population (reproductive success to self-recruitment), reproductive success exported to other subpopulations (reproductive success to local connectivity), and immigration and mortality rates of sub-adults and adults. Approximately 50% of the recruits were assigned to parents from the Kimbe Island population and this was stable through the sampling period. Stability in the proportion of local and immigrant settlers is likely due to: low annual mortality rates and stable egg production rates, and the short larval stages and sensory capacities of reef fish larvae. Biannual mortality rates ranged from 0.09 to 0.55 and varied significantly spatially. We used these data to parametrize a model that estimated the probability of the Kimbe Island population persisting in the absence of immigration. The Kimbe Island population was found to persist without significant immigration. Model results suggest the island population persists because the largest of the subpopulations are maintained due to having low mortality and high self-recruitment rates. Our results enable managers to appropriately target and scale actions to maximize persistence likelihood as disturbance frequencies increase.

  18. Intervention analysis of power plant impact on fish populations

    International Nuclear Information System (INIS)

    Madenjian, C.P.

    1984-01-01

    Intervention analysis was applied to 10 yr (years 1973-1982) of field fish abundance data at the D. C. Cook Nuclear Power Plant, southeastern Lake Michigan. Three log-transformed catch series, comprising monthly observations, were examined for each combination of two species (alewife, Alosa pseudoharenga, or yellow perch, Perca flavescens) and gear (trawl or gill net): catch at the plant discharged transect, catch at the reference transect, and the ratio of plant catch to reference catch. Time series separated by age groups were examined. Based on intervention analysis, no change in the abundance of fish populations could be attributed to plant operation. Additionally, a modification of the intervention analysis technique was applied to investigate trends in abundance at both the plant discharge and reference transects. Significant declines were detected for abundance of alewife adults at both of the transects. Results of the trend analysis support the contention that the alewives have undergone a lakewide decrease in abundance during the 1970s

  19. Historical Population Estimates For Several Fish Species At Offshore Oil and Gas Structures in the US Gulf of Mexico

    Science.gov (United States)

    Gitschlag, G.

    2016-02-01

    Population estimates were calculated for four fish species occurring at offshore oil and gas structures in water depths of 14-32 m off the Louisiana and upper Texas coasts in the US Gulf of Mexico. From 1993-1999 sampling was conducted at eight offshore platforms in conjunction with explosive salvage of the structures. To estimate fish population size prior to detonation of explosives, a fish mark-recapture study was conducted. Fish were captured on rod and reel using assorted hook sizes. Traps were occasionally used to supplement catches. Fish were tagged below the dorsal fin with plastic t-bar tags using tagging guns. Only fish that were alive and in good condition were released. Recapture sampling was conducted after explosives were detonated during salvage operations. Personnel operating from inflatable boats used dip nets to collect all dead fish that floated to the surface. Divers collected representative samples of dead fish that sank to the sea floor. Data provided estimates for red snapper (Lutjanus campechanus), Atlantic spadefish (Chaetodipterus faber), gray triggerfish (Balistes capriscus), and blue runner (Caranx crysos) at one or more of the eight platforms studied. At seven platforms, population size for red snapper was calculated at 503-1,943 with a 95% CI of 478. Abundance estimates for Atlantic spadefish at three platforms ranged from 1,432-1,782 with a 95% CI of 473. At three platforms, population size of gray triggerfish was 63-129 with a 95% CI of 82. Blue runner abundance at one platform was 558. Unlike the other three species which occur close to the platforms, blue runner range widely and recapture of this species was dependent on fish schools being in close proximity to the platform at the time explosives were detonated. Tag recapture was as high as 73% for red snapper at one structure studied.

  20. The Sustainability of Fish Consumption in Romania: Customer Behaviour prior and after the Country`s Adherence to the EU

    Directory of Open Access Journals (Sweden)

    Vlad Roşca

    2014-02-01

    Full Text Available Using two sets of bivariate analyses in SPSS, we have tried to find out how sustainable the fish consumption in Romania is. We have used numerical variables, computed based on primary data obtained from Eurostat and the National Institute of Statistics. Two different timespans have been considered: the one prior to the country’s adherence to the European Union and the one after. Using the two timespans let us compare the pre- and postadherence situations, in order to see if the subsidies offered by the EU have had any effect on the sustainability of the environment. The variables used have been of economic nature (index of real earnings, respectively related to the sustainable consumption of fish, all computed for one calendar year (total fish consumption, captures from inland waters, and aquaculture production. The results indicate significant correlations between total consumption and captures (r = .947 for the first and r = .990 for the second timespan, and between real earnings and consumption, respectively captures (only for the first timespan, but not significant correlations for the links between aquaculture and the rest of the variables. This shows a high pressure placed on the natural environment, which could eventually be reduced by improving aquaculture production.

  1. Energetic and ecological constraints on population density of reef fishes.

    Science.gov (United States)

    Barneche, D R; Kulbicki, M; Floeter, S R; Friedlander, A M; Allen, A P

    2016-01-27

    Population ecology has classically focused on pairwise species interactions, hindering the description of general patterns and processes of population abundance at large spatial scales. Here we use the metabolic theory of ecology as a framework to formulate and test a model that yields predictions linking population density to the physiological constraints of body size and temperature on individual metabolism, and the ecological constraints of trophic structure and species richness on energy partitioning among species. Our model was tested by applying Bayesian quantile regression to a comprehensive reef-fish community database, from which we extracted density data for 5609 populations spread across 49 sites around the world. Our results indicate that population density declines markedly with increases in community species richness and that, after accounting for richness, energetic constraints are manifested most strongly for the most abundant species, which generally are of small body size and occupy lower trophic groups. Overall, our findings suggest that, at the global scale, factors associated with community species richness are the major drivers of variation in population density. Given that populations of species-rich tropical systems exhibit markedly lower maximum densities, they may be particularly susceptible to stochastic extinction. © 2016 The Author(s).

  2. Ocean acidification alters fish populations indirectly through habitat modification

    Science.gov (United States)

    Nagelkerken, Ivan; Russell, Bayden D.; Gillanders, Bronwyn M.; Connell, Sean D.

    2016-01-01

    Ocean ecosystems are predicted to lose biodiversity and productivity from increasing ocean acidification. Although laboratory experiments reveal negative effects of acidification on the behaviour and performance of species, more comprehensive predictions have been hampered by a lack of in situ studies that incorporate the complexity of interactions between species and their environment. We studied CO2 vents from both Northern and Southern hemispheres, using such natural laboratories to investigate the effect of ocean acidification on plant-animal associations embedded within all their natural complexity. Although we substantiate simple direct effects of reduced predator-avoidance behaviour by fishes, as observed in laboratory experiments, we here show that this negative effect is naturally dampened when fish reside in shelter-rich habitats. Importantly, elevated CO2 drove strong increases in the abundance of some fish species through major habitat shifts, associated increases in resources such as habitat and prey availability, and reduced predator abundances. The indirect effects of acidification via resource and predator alterations may have far-reaching consequences for population abundances, and its study provides a framework for a more comprehensive understanding of increasing CO2 emissions as a driver of ecological change.

  3. Analysis of impingement impacts on Hudson River fish populations

    International Nuclear Information System (INIS)

    Barnthouse, L.W.; van Winkle, W.

    1988-01-01

    Impacts of impingement, expressed as reductions in year-class abundance, were calculated for six Hudson River fish populations. Estimates were made for the 1974 and 1975 year classes of white perch, striped bass, Atlantic tomcod, and American shad, and the 1974 year classes of alewife and blueback herring. The maximum estimated reductions in year-class abundance were less than 5% for all year classes except the 1974 and 1975 white perch year classes and the 1974 striped bass year class. Only for white perch were the estimates greater than 10% per year. For striped bass, the 146,000 fish from the 1974 year class that were killed by impingement could have produced 12,000-16,000 5-year-old fish or 270-300 10-year-olds. Also estimated were the reductions in mortality that could have been achieved had closed-cycle cooling systems been installed at one or more of three power plants (Bowline point, Indian Point, and Roseton) and had the screen-wash systems at Bowline Point and Indian Point been modified to improve the survival of impinged fish. Closed-cycle cooling at all three plants would have reduced impingement impacts on white perch, striped bass, and Atlantic tomcod by 75% or more; installation of closed-cycle cooling at Indian Point alone would have reduced impingement impacts on white perch and Atlantic tomcod by 50%-80%. Modified traveling screens would have been less effective than closed-cycle cooling, but still would have reduced impingement impacts on white perch by roughly 20%. 23 refs., 1 fig., 3 tabs

  4. The effects of river flooding on the fish populations of two eastern ...

    African Journals Online (AJOL)

    fish populations in two eastern Cape estuaries is compared. .... Methods. Catch per unit effort (CPUE) of fish in the Swartkops and Sundays estuaries was obtained by means of gill-nets. ..... Abundance of other species was little affected ex-.

  5. Identification of fish populations with particular reference to the pelagic fish stocks of the Indian Ocean region

    Digital Repository Service at National Institute of Oceanography (India)

    Dwivedi, S.N.

    The most essential step in any fishery management is the identification of discrete fish populations. This is particularly important for the development of Indian Ocean pelagic fisheries. The simple signal character analysis of meristic or metric...

  6. Relative distribution and abundance of fishes and crayfish in 2010 and 2014 prior to saltcedar (Tamarix ssp.) removal in the Amargosa River Canyon, southeastern California

    Science.gov (United States)

    Hereford, Mark E.

    2016-07-22

    The Amargosa River Canyon, located in the Mojave Desert of southeastern California, contains the longest perennial reach of the Amargosa River. Because of its diverse flora and fauna, it has been designated as an Area of Critical Environmental Concern and a Wild and Scenic River by the Bureau of Land Management. A survey of fishes conducted in summer 2010 indicated that endemic Amargosa River pupfish (Cyprinodon nevadensis amargosae) and speckled dace (Rhinichthys osculus spp.) were abundant and occurred throughout the Amargosa River Canyon. The 2010 survey reported non-native red swamp crayfish (Procambarus clarkii) and western mosquitofish (Gambusia affinis) captures were significantly higher, whereas pupfish captures were lower, in areas dominated by non-native saltcedar (Tamarix ssp.). Based on the 2010 survey, it was hypothesized that the invasion of saltcedar could result in a decrease in native species. In an effort to maintain and enhance native fish populations, the Bureau of Land Management removed saltcedar from a 1,550 meter reach of stream on the Amargosa River in autumn 2014 and autumn 2015. Prior to the removal of saltcedar, a survey of fishes and crayfish using baited minnow traps was conducted in the treatment reach to serve as a baseline for future comparisons with post-saltcedar removal surveys. During the 2014 survey, 1,073 pupfish and 960 speckled dace were captured within the treatment reach. Catch per unit effort of pupfish and speckled dace in the treatment reach was less in 2014 than in 2010, although differences could be owing to seasonal variation in capture probability. Non-native mosquitofish catch per unit effort decreased from 2010 to 2014; however, the catch per unit effort of crayfish increased from 2010 to 2014. Future monitoring efforts of this reach should be conducted at the same time period to account for potential seasonal fluctuations of abundance and distribution of fishes and crayfish. A more robust study design that

  7. Association of prior HPV vaccination with reduced preterm birth: A population based study.

    Science.gov (United States)

    Lawton, Beverley; Howe, Anna S; Turner, Nikki; Filoche, Sara; Slatter, Tania; Devenish, Celia; Hung, Noelyn Anne

    2018-01-02

    Emerging evidence suggests that HPV infection is associated with negative pregnancy outcomes such as preterm birth (PTB), and pre-eclampsia. We aimed to determine if prior HPV vaccination reduced adverse pregnancy outcomes. A New Zealand population-based retrospective study linking first pregnancy outcome data (2008-2014 n = 35,646) with prior quadrivalent HPV vaccination status. Primary outcomes were likelihood (odds ratios, ORs) of PTB, pre-eclampsia, and stillbirth. Exposure groups were based on HPV vaccination. Adjusted ORs were calculated for each outcome, controlling for mother's age at delivery, ethnicity, socioeconomic status, health board region at time of delivery, and body mass index and smoking status at time of registration with maternity care provider. Mother's mean age at delivery was 19 (SD 2.1) years. Of 34,994 the pregnancies included in the final study analyses 62.3% of women were unvaccinated, 11.0% vaccinated with one or two doses and 27.7% vaccinated with three doses prior to pregnancy. PTB (OR: 0.87; CI 0.78, 0.96)) was significantly lower for women who previously received the HPV vaccine. A dose response effect was found with each successive dose received decreasing the likelihood of PTB. No associations between the vaccinated and unvaccinated groups were shown for pre-eclampsia or stillbirth. Prior receipt of the quadrivalent HPV vaccine was associated with a significant reduction in PTB (13%); suggesting that HPV vaccination may be effective in reducing PTB. The potential global public health impact is considerable and there is urgency to undertake further research to replicate and explore these findings. Copyright © 2017 Elsevier Ltd. All rights reserved.

  8. Assessment of the pelagic fish populations using CEN multi-mesh gillnets: consequences for the characterization of the fish communities

    Directory of Open Access Journals (Sweden)

    C. Deceliere-Vergès

    2008-01-01

    Full Text Available The contribution of CEN standard pelagic nets to the assessment of fish communities is tested by comparing three metrics (species composition, species abundance, and size structures measured in accordance with the standard (i.e. using benthic nets only to those calculated from the total effort (i.e. including pelagic nets. Hydroacoustic surveys were used simultaneously to assess fish densities in the pelagic habitat. The results show that in most cases the pelagic nets did not provide any extra information about these three metrics. However, their inclusion in the calculation of CPUE and size structures may affect the picture of the fish communities, especially in lakes containing salmonid populations. This study highlights the need to sample pelagic fish when assessing fish communities in order to determine lake quality.

  9. Molecularly imprinted polymers for extraction of malachite green from fish samples prior to its determination by HPLC

    International Nuclear Information System (INIS)

    Li, Lu; Chen, Xiao-mei; Zhang, Hong-yuan; Lin, Yi-dong; Lin, Zheng-zhong; Huang, Zhi-yong; Lai, Zhu-zhi

    2015-01-01

    Molecularly imprinted polymer (MIP) particles for malachite green (MG) were prepared by emulsion polymerization using methacrylic acid as the functional monomer, ethylene glycol dimethacrylate as the cross-linker, and a combination of Span-80 and Tween-80 as an emulsifier. The MIP particles were characterized by SEM micrographs and FT-IR spectra. Their binding capacity for MG was evaluated based on kinetic and isothermal adsorption experiments and compared to non-imprinted polymer particles. Analytical figures of merit include an adsorption equilibrium time of 15 min, an adsorption capacity of 1.9 mg∙g -1 in acetonitrile-water (20:80), and an imprinting factor of 1.85. The MIP particles were successfully applied to the extraction of MG from fish samples spiked with MG and the other interfering substances prior to its determination of MG by HPLC. Spiked samples gave recoveries of MG that ranged from 86 to 104 %, much higher than that of the other interfering substance. (author)

  10. Fish assemblages

    Science.gov (United States)

    McGarvey, Daniel J.; Falke, Jeffrey A.; Li, Hiram W.; Li, Judith; Hauer, F. Richard; Lamberti, G.A.

    2017-01-01

    Methods to sample fishes in stream ecosystems and to analyze the raw data, focusing primarily on assemblage-level (all fish species combined) analyses, are presented in this chapter. We begin with guidance on sample site selection, permitting for fish collection, and information-gathering steps to be completed prior to conducting fieldwork. Basic sampling methods (visual surveying, electrofishing, and seining) are presented with specific instructions for estimating population sizes via visual, capture-recapture, and depletion surveys, in addition to new guidance on environmental DNA (eDNA) methods. Steps to process fish specimens in the field including the use of anesthesia and preservation of whole specimens or tissue samples (for genetic or stable isotope analysis) are also presented. Data analysis methods include characterization of size-structure within populations, estimation of species richness and diversity, and application of fish functional traits. We conclude with three advanced topics in assemblage-level analysis: multidimensional scaling (MDS), ecological networks, and loop analysis.

  11. Modeling the fish community population dynamics and forecasting the eradication success of an exotic fish from an alpine stream

    Science.gov (United States)

    Laplanche, Christophe; Elger, Arnaud; Santoul, Frédéric; Thiede, Gary P.; Budy, Phaedra

    2018-01-01

    Management actions aimed at eradicating exotic fish species from riverine ecosystems can be better informed by forecasting abilities of mechanistic models. We illustrate this point with an example of the Logan River, Utah, originally populated with endemic cutthroat trout (Oncorhynchus clarkii utah), which compete with exotic brown trout (Salmo trutta). The coexistence equilibrium was disrupted by a large scale, experimental removal of the exotic species in 2009–2011 (on average, 8.2% of the stock each year), followed by an increase in the density of the native species. We built a spatially-explicit, reaction-diffusion model encompassing four key processes: population growth in heterogeneous habitat, competition, dispersal, and a management action. We calibrated the model with detailed long-term monitoring data (2001–2016) collected along the 35.4-km long river main channel. Our model, although simple, did a remarkable job reproducing the system steady state prior to the management action. Insights gained from the model independent predictions are consistent with available knowledge and indicate that the exotic species is more competitive; however, the native species still occupies more favorable habitat upstream. Dynamic runs of the model also recreated the observed increase of the native species following the management action. The model can simulate two possible distinct long-term outcomes: recovery or eradication of the exotic species. The processing of available knowledge using Bayesian methods allowed us to conclude that the chance for eradication of the invader was low at the beginning of the experimental removal (0.7% in 2009) and increased (20.5% in 2016) by using more recent monitoring data. We show that accessible mathematical and numerical tools can provide highly informative insights for managers (e.g., outcome of their conservation actions), identify knowledge gaps, and provide testable theory for researchers.

  12. Population preference of net texture prior to bed net trial in Kala-Azar-endemic areas.

    Directory of Open Access Journals (Sweden)

    Murari L Das

    Full Text Available Prior to a community-based efficacy trial of long-lasting insecticidal nets (LLINs in the prevention of visceral leishmaniasis (VL; also called kala-azar, a pilot study on preference of tools was held in endemic areas of India and Nepal in September 2005.LLINs made of polyester and polyethylene were distributed to 60 participants, who used the nets sequentially for 7 d. Acceptability and preference were evaluated via indirect indicators through questionnaires at three defined time points before and after use of the LLINs and through focus group discussions (FGDs. In the latter, preferences for color and size were also assessed. Untreated bed nets were owned by 87% of the households prior to the study. All users liked textures of both LLIN types after 7 d of use, but had a slight preference for those made of polyester if they were to recommend a LLIN to relatives or friends (p<0.05, mainly because of their relatively greater softness in comparison to polyethylene LLINs. Users reported that both net types reduced mosquito bites and number of insects, including sand fly (bhusana; genus Phlebotomus, inside the house. Side effects were minor and disappeared quickly.The large-scale intervention trial considered the preferences of the study population to decide on the best tool of intervention--light-blue, rectangular, polyester LLINs of different sizes.

  13. Proximate analysis of female population of wild feather back fish ...

    African Journals Online (AJOL)

    User

    2011-05-09

    May 9, 2011 ... Key words: Body composition, Notopterus notopterus, condition factor, wild fish. INTRODUCTION. Proximate body composition is the analysis of water, fat, protein and ash contents of the fish (Love, 1980). Proximate composition is a good indicator of physiology which is needed for routine analysis of ...

  14. Fish collagen is an important panallergen in the Japanese population.

    Science.gov (United States)

    Kobayashi, Y; Akiyama, H; Huge, J; Kubota, H; Chikazawa, S; Satoh, T; Miyake, T; Uhara, H; Okuyama, R; Nakagawara, R; Aihara, M; Hamada-Sato, N

    2016-05-01

    Collagen was identified as a fish allergen in early 2000s. Although its allergenic potential has been suggested to be low, risks associated with collagen as a fish allergen have not been evaluated to a greater extent. In this study, we aimed to clarify the importance of collagen as a fish allergen. Our results showed that 50% of Japanese patients with fish allergy had immunoglobulin E (IgE) against mackerel collagen, whereas 44% had IgE against mackerel parvalbumin. IgE inhibition assay revealed high cross-reactivity of mackerel collagen to 22 fish species (inhibition rates: 87-98%). Furthermore, a recently developed allergy test demonstrated that collagen triggered IgE cross-linking on mast cells. These data indicate that fish collagen is an important and very common panallergen in fish consumed in Japan. The high rate of individuals' collagen allergy may be attributable to the traditional Japanese custom of raw fish consumption. © 2016 John Wiley & Sons A/S. Published by John Wiley & Sons Ltd.

  15. Correlation set analysis: detecting active regulators in disease populations using prior causal knowledge

    Directory of Open Access Journals (Sweden)

    Huang Chia-Ling

    2012-03-01

    Full Text Available Abstract Background Identification of active causal regulators is a crucial problem in understanding mechanism of diseases or finding drug targets. Methods that infer causal regulators directly from primary data have been proposed and successfully validated in some cases. These methods necessarily require very large sample sizes or a mix of different data types. Recent studies have shown that prior biological knowledge can successfully boost a method's ability to find regulators. Results We present a simple data-driven method, Correlation Set Analysis (CSA, for comprehensively detecting active regulators in disease populations by integrating co-expression analysis and a specific type of literature-derived causal relationships. Instead of investigating the co-expression level between regulators and their regulatees, we focus on coherence of regulatees of a regulator. Using simulated datasets we show that our method performs very well at recovering even weak regulatory relationships with a low false discovery rate. Using three separate real biological datasets we were able to recover well known and as yet undescribed, active regulators for each disease population. The results are represented as a rank-ordered list of regulators, and reveals both single and higher-order regulatory relationships. Conclusions CSA is an intuitive data-driven way of selecting directed perturbation experiments that are relevant to a disease population of interest and represent a starting point for further investigation. Our findings demonstrate that combining co-expression analysis on regulatee sets with a literature-derived network can successfully identify causal regulators and help develop possible hypothesis to explain disease progression.

  16. STRUCTURE, GROWTH AND MORPHOLOGY OF FISH POPULATIONS FROM GRAVEL-PIT VUKOVINA

    Directory of Open Access Journals (Sweden)

    Ivan Jakovlić

    2001-12-01

    Full Text Available After the structure of fish populations from gravel-pit Vukovina was determined, those populations were checked for 10 morphometric and 4 meristic parameters, as well as for length-mass relationship. For chub (Leuciscus cephalus and pumpkinseed (Lepomis gibbosus some meristic characters expressed the values beyond those mentioned in the standard key for the freshwater fish species determination. When compared to other locations, length-mass relationship and condition factor (CF were significantly lower for all checked populations. This indicates that gravel-pit Vukovina is extremely oligotrophic and has very poor fish production.

  17. Monitoring of fish species in the Lamone river: distribution and morphometric measures of the populations

    Directory of Open Access Journals (Sweden)

    Riccardo Bozzi

    2010-01-01

    Full Text Available Fish samplings were carried out monthly from spring to autumn during 2008, on the Lamone river and the Campigno stream by an electrofishing, in order to verify the presence of fish populations and the most common species represented. Barb, Barbus plebejus, Blageon, Leuciscus muticellus, Chub, Leuciscus cephalus, South European Nase, Chondrostoma genei were identified. A small population of Brown trout, Salmo trutta fario was also recognized. Barb is the most represented species in all the sites. The samplings highlight that Lamone river presented conditions suitable to fully guarantee the life of the fish populations.

  18. Bottom-up effects of climate on fish populations: data from the Continuous Plankton Recorder

    DEFF Research Database (Denmark)

    Pitois, S.G.; Lynam, C.P.; Jansen, Teunis

    2012-01-01

    The Continuous Plankton Recorder (CPR) dataset on fish larvae has an extensive spatio-temporal coverage that allows the responses of fish populations to past changes in climate variability, including abrupt changes such as regime shifts, to be investigated. The newly available dataset offers...... in the plankton ecosystem, while the larvae of migratory species such as Atlantic mackerel responded more to hydrographic changes. Climate variability seems more likely to influence fish populations through bottom-up control via a cascading effect from changes in the North Atlantic Oscillation (NAO) impacting...... with fishing effects interacting with climate effects and this study supports furthering our under - standing of such interactions before attempting to predict how fish populations respond to climate variability...

  19. Climate change effects on North American inland fish populations and assemblages

    Science.gov (United States)

    Lynch, Abigail J.; Myers, Bonnie; Chu, Cindy; Eby, Lisa A.; Falke, Jeffrey A.; Kovach, Ryan P.; Krabbenhoft, Trevor J.; Kwak, Thomas J.; Lyons, John; Paukert, Craig P.; Whitney, James E.

    2016-01-01

    Climate is a critical driver of many fish populations, assemblages, and aquatic communities. However, direct observational studies of climate change impacts on North American inland fishes are rare. In this synthesis, we (1) summarize climate trends that may influence North American inland fish populations and assemblages, (2) compile 31 peer-reviewed studies of documented climate change effects on North American inland fish populations and assemblages, and (3) highlight four case studies representing a variety of observed responses ranging from warmwater systems in the southwestern and southeastern United States to coldwater systems along the Pacific Coast and Canadian Shield. We conclude by identifying key data gaps and research needs to inform adaptive, ecosystem-based approaches to managing North American inland fishes and fisheries in a changing climate.

  20. Marine foraging and annual fish consumption of a south polar Skua population in the maritime Antarctic

    NARCIS (Netherlands)

    Hahn, S.M.; Ritz, M.S.; Reinhardt, K.

    2008-01-01

    Pelagic fish are an important component of Antarctic food webs but few quantitative data exist on energy transfer from fish to seabirds for the Seasonal Pack-ice Zone. We studied a local population of south polar, skuas Catharacta maccormicki during a whole breeding cycle and estimated its entire

  1. Circulating rotavirus genotypes in the Irish paediatric population prior to the introduction of the vaccination programme.

    Science.gov (United States)

    Yandle, Z; Coughlan, S; Drew, R J; O'Flaherty, N; O'Gorman, J; De Gascun, C

    2017-11-01

    Rotavirus is the leading cause of viral gastroenteritis in children, and it is anticipated that the introduction of the Rotarix™ vaccine (GlaxoSmithKline Biologicals S.A., Rixensart, Belgium) into the Irish immunisation schedule will result in a significant reduction of rotavirus-associated disease. In the pre- and post-vaccination eras, it is important to determine circulating strains of rotavirus to assess vaccine effectiveness, to monitor vaccine failures, and to detect potential emerging strains. This study was a collaboration between the Temple Street Children's University Hospital (TSCUH), Dublin, and the National Virus Reference Laboratory (NVRL), Dublin, to determine the then circulating rotavirus strains in a paediatric hospital. In the 2015/2016 period (July 2015-June 2016) 89 faecal samples from paediatric patients (53 from TSCUH, 36 from other hospitals) were characterised. The results showed G1P[8] to be the predominant genotype (57%), followed by G9P[8] (34%), G4P[8] (6%), G2P[4] (2%), and G12P[8] (1%). This distribution of genotypes is comparable to those found in other European countries prior to vaccination suggesting that the vaccine should be highly efficacious in the Irish population.

  2. Report of the Workshop on Population Characteristics and Change in Coastal Fishing Communities: Madras, India, 10-14 March 1997

    National Research Council Canada - National Science Library

    1997-01-01

    This workshop brought together 23 fisheries scientists/socio-economists and population experts with experience in demographic and population research on fishing communities and in fisheries management...

  3. First genealogy for a wild marine fish population reveals multigenerational philopatry

    KAUST Repository

    Salles, Océ ane C.; Pujol, Benoit; Maynard, Jeffrey A.; Almany, Glenn R.; Berumen, Michael L.; Jones, Geoffrey P.; Saenz-Agudelo, Pablo; Srinivasan, Maya; Thorrold, Simon R.; Planes, Serge

    2016-01-01

    Natal philopatry, the return of individuals to their natal area for reproduction, has advantages and disadvantages for animal populations. Natal philopatry may generate local genetic adaptation, but it may also increase the probability of inbreeding that can compromise persistence. Although natal philopatry is well documented in anadromous fishes, marine fish may also return to their birth site to spawn. How philopatry shapes wild fish populations is, however, unclear because it requires constructing multigenerational pedigrees that are currently lacking for marine fishes. Here we present the first multigenerational pedigree for a marine fish population by repeatedly genotyping all individuals in a population of the orange clownfish (Amphiprion percula) at Kimbe Island (Papua New Guinea) during a 10-y period. Based on 2927 individuals, our pedigree analysis revealed that longitudinal philopatry was recurrent over five generations. Progeny tended to settle close to their parents, with related individuals often sharing the same colony. However, successful inbreeding was rare, and genetic diversity remained high, suggesting occasional inbreeding does not impair local population persistence. Local reproductive success was dependent on the habitat larvae settled into, rather than the habitat they came from. Our study suggests that longitudinal philopatry can influence both population replenishment and local adaptation of marine fishes. Resolving multigenerational pedigrees during a relatively short period, as we present here, provides a framework for assessing the ability of marine populations to persist and adapt to accelerating climate change.

  4. First genealogy for a wild marine fish population reveals multigenerational philopatry

    KAUST Repository

    Salles, Océane C.

    2016-11-01

    Natal philopatry, the return of individuals to their natal area for reproduction, has advantages and disadvantages for animal populations. Natal philopatry may generate local genetic adaptation, but it may also increase the probability of inbreeding that can compromise persistence. Although natal philopatry is well documented in anadromous fishes, marine fish may also return to their birth site to spawn. How philopatry shapes wild fish populations is, however, unclear because it requires constructing multigenerational pedigrees that are currently lacking for marine fishes. Here we present the first multigenerational pedigree for a marine fish population by repeatedly genotyping all individuals in a population of the orange clownfish (Amphiprion percula) at Kimbe Island (Papua New Guinea) during a 10-y period. Based on 2927 individuals, our pedigree analysis revealed that longitudinal philopatry was recurrent over five generations. Progeny tended to settle close to their parents, with related individuals often sharing the same colony. However, successful inbreeding was rare, and genetic diversity remained high, suggesting occasional inbreeding does not impair local population persistence. Local reproductive success was dependent on the habitat larvae settled into, rather than the habitat they came from. Our study suggests that longitudinal philopatry can influence both population replenishment and local adaptation of marine fishes. Resolving multigenerational pedigrees during a relatively short period, as we present here, provides a framework for assessing the ability of marine populations to persist and adapt to accelerating climate change.

  5. Paleoecological studies on variability in marine fish populations: A long-term perspective on the impacts of climatic change on marine ecosystems

    Science.gov (United States)

    Finney, Bruce P.; Alheit, Jürgen; Emeis, Kay-Christian; Field, David B.; Gutiérrez, Dimitri; Struck, Ulrich

    2010-02-01

    The use of historical fishing records to understand relationships between climatic change and fish abundance is limited by the relatively short duration of these records, and complications due to the strong influence of human activity in addition to climatic change. Sedimentary records containing scales, bones or geochemical proxies of variability in fish populations provide unique insights on long-term ecosystem dynamics and relationships with climatic change. Available records from Holocene sediments are summarized and synthesized. The records are from several widespread locations near or along the continental margins of the South Atlantic and Pacific oceans, including Alaska, USA (Pacific salmon), Saanich and Effingham Inlets, British Columbia, Canada (pelagic fish), Santa Barbara Basin, California, USA (Northern anchovies and Pacific sardines), Gulf of California, Mexico (Pacific sardines, Northern anchovies and Pacific hake), Peru upwelling system (sardines, anchovies and hake), and Benguela Current System, South Africa (sardines, anchovies and hake). These records demonstrate that fish population sizes are not constant, and varied significantly over a range of time scales prior to the advent of large-scale commercial fishing. In addition to the decadal-scale variability commonly observed in historical records, the long-term records reveal substantial variability over centennial and millennial time scales. Shifts in abundance are often, but not always, correlated with regional and/or global climatic changes. The long-term perspective reveals different patterns of variability in fish populations, as well as fish-climate relationships, than suggested by analysis of historical records. Many records suggest prominent changes in fish abundance at ca. 1000-1200 AD, during the Little Ice Age, and during the transition at the end of the Little Ice Age in the 19th century that may be correlative, and that were likely driven by major hemispheric or global

  6. Distribution of 137Cs among individuals in fish and mammal populations in Chornobyl

    International Nuclear Information System (INIS)

    Smith, M.; Glenn, T.; Oleksyk, T.; Gashchak, S.; Zalissky, A.

    2001-01-01

    The frequency distribution of 137 Cs in populations of fish and mammals is not normal, because there is a strong relationship between the standard deviation and the mean of the distributions for both fish and mammals. The distribution for mammals is more skewed than for fish. These two types of vertebrates probably use their environment in fundamentally different ways and/or 137 Cs is distributed more heterogeneously in terrestrial than in aquatic environments. The greatest risk from the contaminant is confined to a few individuals in each population

  7. Coral reef fish populations can persist without immigration

    KAUST Repository

    Salles, Océ ane C.; Maynard, Jeffrey A.; Joannides, Marc; Barbu, Corentin M.; Saenz-Agudelo, Pablo; Almany, Glenn R.; Berumen, Michael L.; Thorrold, Simon R.; Jones, Geoffrey P.; Planes, Serge

    2015-01-01

    and this was stable through the sampling period. Stability in the proportion of local and immigrant settlers is likely due to: low annual mortality rates and stable egg production rates, and the short larval stages and sensory capacities of reef fish larvae. Biannual

  8. Spatially resolved fish population analysis for designing MPAs

    DEFF Research Database (Denmark)

    Christensen, Asbjørn; Mosegaard, Henrik; Jensen, Henrik

    2009-01-01

    demonstrated that ecosystem self-regulation must be included when modelling the efficiency of MPAs, and for lesser sandeel, that self-regulation partially counteracts the benefits of a fishing sanctuary. The use of realistic habitat connectivity is critical for both qualitative and quantitative MPA assessment...

  9. Recovery of a wild fish population from whole-lake additions of a synthetic estrogen.

    Science.gov (United States)

    Blanchfield, Paul J; Kidd, Karen A; Docker, Margaret F; Palace, Vince P; Park, Brad J; Postma, Lianne D

    2015-03-03

    Despite widespread recognition that municipal wastewaters contain natural and synthetic estrogens, which interfere with development and reproduction of fishes in freshwaters worldwide, there are limited data on the extent to which natural populations of fish can recover from exposure to these compounds. We conducted whole-lake additions of an active component of the birth control pill (17α-ethynylestradiol; EE2) that resulted in the collapse of the fathead minnow (Pimephales promelas) population. Here we quantify physiological, population, and genetic characteristics of this population over the 7 years after EE2 additions stopped to determine if complete recovery was possible. By 3 years post-treatment, whole-body vitellogenin concentrations in male fathead minnow had returned to baseline, and testicular abnormalities were absent. In the spring of the fourth year, adult size-frequency distribution and abundance had returned to pretreatment levels. Microsatellite analyses clearly showed that postrecovery fish were descendants of the original EE2-treated population. Results from this whole-lake experiment demonstrate that fish can recover from EE2 exposure at the biochemical through population levels, although the timelines to do so are long for multigenerational exposures. These results suggest that wastewater treatment facilities that reduce discharges of estrogens and their mimics can improve the health of resident fish populations in their receiving environments.

  10. Fish Habitat and Fish Populations in a Southern Appalachian Watershed before and after Hurricane Hugo

    Science.gov (United States)

    C. Andrew Dolloff; Patricia A. Flebbe; Michael D. Owen

    1994-01-01

    Habitat features and relative abundance of all fish species were estimated in 8.4 km of a small mountain stream system before and 11 months after Hurricane Hugo crossed the southern Appalachians in September 1989. There was no change in the total amount (area) of each habitat type but the total number of habitat units decreased and average size and depth of habitat...

  11. Temporal variation of blood and hair mercury levels in pregnancy in relation to fish consumption history in a population living along the St. Lawrence River

    International Nuclear Information System (INIS)

    Morrissette, Joeelle; Takser, Larissa; St-Amour, Genevieve; Smargiassi, Audrey; Lafond, Julie; Mergler, Donna

    2004-01-01

    Fish consumption from the Great Lakes and the St. Lawrence River has been decreasing over the last years due to advisories and increased awareness of the presence of several contaminants. Methylmercury (MeHg), a well-established neurotoxicant even at low levels of exposure, bioaccumulates to differing degrees in various fish species and can have serious adverse effects on the development and functioning of the human central nervous system, especially during prenatal exposure. Most studies on MeHg exposure have focussed on high-level consumers from local fish sources, although mercury (Hg) is also present in fresh, frozen, and canned market fish. Moreover, little information exists on the temporal variation of blood and hair Hg in pregnant women, particularly in populations with low levels of Hg. The aim of the present study was to characterize the temporal variation of Hg during pregnancy and to investigate the relation between fish consumption from various sources prior to and during pregnancy and maternal cord blood and mother's hair Hg levels. We recruited 159 pregnant women from Southwest Quebec through two prenatal clinics of the Quebec Public Health System. All women completed two detailed questionnaires concerning their fish consumption (species and frequency) prior to and during pregnancy. The women also provided blood samples for all three trimesters of pregnancy and hair samples after delivery of up to 9 cm in length. Blood and hair Hg levels were analyzed by cold-vapor atomic-absorption and -fluorescence spectrometry methods, respectively. Results showed that maternal blood and hair Hg levels decreased significantly between the second and third trimesters of pregnancy. However, cord blood Hg was significantly higher than maternal blood at birth. Maternal hair was correlated with Hg blood concentration and was highly predictive of the organic fraction in cord blood. A strong dose relation was observed between the frequency of fish consumption before and

  12. Genetic evidence of population structuring in the neotropical freshwater fish Brycon hilarii (Valenciennes, 1850

    Directory of Open Access Journals (Sweden)

    A Sanches

    Full Text Available Brycon hilarii is a migratory fish widely distributed throughout the Paraguay River Basin. It is appreciated in sport fishing and for its superior meat quality. It is also the main species for tourist attraction in the Bonito region (State of Mato Grosso do Sul, Brazil. Considering the lack of information on the genetic structure of the fish of this species, the aim of the present study was to detect the genetic variability of Brycon hilarii through RAPD markers. A total of eighty specimens collected in different seasons at four sites of the Miranda River sub-basin (Paraguay River Basin, Brazil were used for analysis. The results of genetic similarity, Shannon diversity, and AMOVA revealed differences between the sampling sites. Through AMOVA, differences between populations were more evident among the animals collected during the non-reproductive season, corresponding to a time of less movement of these fish. A population structuring model in which B. hilarii appears organized into genetically differentiated reproductive units that coexist and co-migrate through the studied system was suggested, contrasting the currently accepted idea that freshwater migratory fish form large panmictic populations in a determined hydrographic system. Despite the lack of a complete picture regarding the distribution of B. hilarii in the studied region, this initial idea on its population genetic structure could be an important contribution to providing aid for management and conservation programs of these fish.

  13. Ocean Acidification Effects on Atlantic Cod Larval Survival and Recruitment to the Fished Population.

    Science.gov (United States)

    Stiasny, Martina H; Mittermayer, Felix H; Sswat, Michael; Voss, Rüdiger; Jutfelt, Fredrik; Chierici, Melissa; Puvanendran, Velmurugu; Mortensen, Atle; Reusch, Thorsten B H; Clemmesen, Catriona

    2016-01-01

    How fisheries will be impacted by climate change is far from understood. While some fish populations may be able to escape global warming via range shifts, they cannot escape ocean acidification (OA), an inevitable consequence of the dissolution of anthropogenic carbon dioxide (CO2) emissions in marine waters. How ocean acidification affects population dynamics of commercially important fish species is critical for adapting management practices of exploited fish populations. Ocean acidification has been shown to impair fish larvae's sensory abilities, affect the morphology of otoliths, cause tissue damage and cause behavioural changes. Here, we obtain first experimental mortality estimates for Atlantic cod larvae under OA and incorporate these effects into recruitment models. End-of-century levels of ocean acidification (~1100 μatm according to the IPCC RCP 8.5) resulted in a doubling of daily mortality rates compared to present-day CO2 concentrations during the first 25 days post hatching (dph), a critical phase for population recruitment. These results were consistent under different feeding regimes, stocking densities and in two cod populations (Western Baltic and Barents Sea stock). When mortality data were included into Ricker-type stock-recruitment models, recruitment was reduced to an average of 8 and 24% of current recruitment for the two populations, respectively. Our results highlight the importance of including vulnerable early life stages when addressing effects of climate change on fish stocks.

  14. Influence of inocula with prior hydrocarbon exposure on biodegradation rates of diesel, synthetic diesel, and fish-biodiesel in soil.

    Science.gov (United States)

    Horel, Agota; Schiewer, Silke

    2014-08-01

    To achieve effective bioremediation within short warm seasons of cold climates, microbial adaptation periods to the contaminant should be brief. The current study investigated growth phases for soil spiked with diesel, Syntroleum, or fish biodiesel, using microbial inocula adapted to the specific substrates. For modeling hydrocarbon degradation, multi-phase first order kinetics was assumed, comparing linear regression with nonlinear parameter optimization of rate constants and phase durations. Lag phase periods of 5 to >28d were followed by short and intense exponential growth phases with high rate constants (e.g. from kFish=0.0013±0.0002 to kSyntr=0.015±0.001d(-1)). Hydrocarbon mineralization was highest for Syntroleum contamination, where up to three times higher cumulative CO2 production was achieved than for diesel fuel, with fish biodiesel showing initially the slowest degradation. The amount of hydrocarbons recovered from the soil by GC-MS decreased in the order fish biodiesel>diesel>Syntroleum. During initial weeks, biodegradation was higher for microbial inocula adapted to a specific fuel type, whereby the main effect of the inoculum was to shorten the lag phase duration; however, the inoculum's importance diminished after daily respiration peaked. In conclusion, addition of an inoculum to increase biodegradation rates was not necessary. Copyright © 2014 Elsevier Ltd. All rights reserved.

  15. Knowledge about fish consumption advisories: a risk communication failure within a university population.

    Science.gov (United States)

    Burger, Joanna; Gochfeld, Michael

    2008-02-15

    Considerable attention has focused on whether people are aware of fish consumption advisories, particularly among fishermen and as a function of demographic variables. Yet little attention has been directed at the messages people are receiving from fish consumption advisories. This study examines knowledge about the benefits and risks of fish in relation to ethnicity and the degree of knowledge in a general university population in New Jersey. Subjects were asked open-ended questions about risks and benefits and responses were grouped into categories. A far greater percent of people had heard something about the risks and benefits of eating fish than could report specific information about the risks or benefits. While only 16% of subjects did not know what the benefits of eating fish were, 62% did not have any specific information about why there were warnings. However, for people who had some specific information, a higher proportion (57%) could identify the chemicals (PCBs, mercury) causing the risks, than could identify omega-3 fatty acids as contributing to benefits (40%). Much of the knowledge was very general, such as eating fish is "good for the heart", "good for you", or "brain food". Less than half of the subjects could name species of fish that were either high or low in contaminants. There were ethnic disparities in knowledge about both the benefits and the risks from fish consumption. A higher percentage of whites knew about both the benefits and risks of fish consumption than others; Asians knew the least about the risks, and blacks and hispanics knew the least about the benefits. There were also ethnic differences in ability to name fish that are low in contaminants, or high in contaminants. Minorities, particularly hispanics, were unable to list species that are high in contaminants. We identified three levels of knowledge about fish consumption: 1) whether people are aware of the risks or benefits of fish consumption, 2) whether they have any

  16. Assessing risks to fish populations near a proposed disposal facility for used nuclear fuel

    International Nuclear Information System (INIS)

    Hart, D.; Miesenheimer, P.; Hull, R.

    1995-01-01

    The concept of used nuclear fuel disposal in the Canadian Shield is currently undergoing a federal environmental assessment review process. As part of this review, potential risks to brook trout populations in the vicinity of such an underground repository were considered. Chemical fate, transport and exposure models have been utilized to estimate the dose rates from released radionuclides and other fuel constituents, and these likely will not be sufficient to harm fish in nearby streams. However, other stressors such as habitat alteration (e.g., loss of upwelling) and/or fishing pressure associated with increased public access could have significant population impacts if the site is located in a pristine northern region. Population models are utilized to explore the risks of local population reduction for different combinations of fishing pressure and habitat degradation

  17. Clinical epidemiology of reduced kidney function among elderly male fishing and agricultural population in Taipei, Taiwan.

    Science.gov (United States)

    Kuo, Chi-Mei; Chien, Wu-Hsiung; Shen, Hsi-Che; Hu, Yi-Chun; Chen, Yu-Fen; Tung, Tao-Hsin

    2013-01-01

    To quantify the prevalence of and associated factors for chronic kidney disease (CKD) among male elderly fishing and agricultural population in Taipei, Taiwan. Subjects (n = 2,766) aged 65 years and over voluntarily admitted to a teaching hospital for a physical checkup were collected in 2010. CKD was defined as an estimated glomerular filtration rate agricultural population.

  18. High-throughput telomere length quantification by FISH and its application to human population studies.

    Science.gov (United States)

    Canela, Andrés; Vera, Elsa; Klatt, Peter; Blasco, María A

    2007-03-27

    A major limitation of studies of the relevance of telomere length to cancer and age-related diseases in human populations and to the development of telomere-based therapies has been the lack of suitable high-throughput (HT) assays to measure telomere length. We have developed an automated HT quantitative telomere FISH platform, HT quantitative FISH (Q-FISH), which allows the quantification of telomere length as well as percentage of short telomeres in large human sample sets. We show here that this technique provides the accuracy and sensitivity to uncover associations between telomere length and human disease.

  19. It is the economy, stupid! Projecting the fate of fish populations using ecological-economic modeling.

    Science.gov (United States)

    Quaas, Martin F; Reusch, Thorsten B H; Schmidt, Jörn O; Tahvonen, Olli; Voss, Rudi

    2016-01-01

    Four marine fish species are among the most important on the world market: cod, salmon, tuna, and sea bass. While the supply of North American and European markets for two of these species - Atlantic salmon and European sea bass - mainly comes from fish farming, Atlantic cod and tunas are mainly caught from wild stocks. We address the question what will be the status of these wild stocks in the midterm future, in the year 2048, to be specific. Whereas the effects of climate change and ecological driving forces on fish stocks have already gained much attention, our prime interest is in studying the effects of changing economic drivers, as well as the impact of variable management effectiveness. Using a process-based ecological-economic multispecies optimization model, we assess the future stock status under different scenarios of change. We simulate (i) technological progress in fishing, (ii) increasing demand for fish, and (iii) increasing supply of farmed fish, as well as the interplay of these driving forces under different scenarios of (limited) fishery management effectiveness. We find that economic change has a substantial effect on fish populations. Increasing aquaculture production can dampen the fishing pressure on wild stocks, but this effect is likely to be overwhelmed by increasing demand and technological progress, both increasing fishing pressure. The only solution to avoid collapse of the majority of stocks is institutional change to improve management effectiveness significantly above the current state. We conclude that full recognition of economic drivers of change will be needed to successfully develop an integrated ecosystem management and to sustain the wild fish stocks until 2048 and beyond. © 2015 John Wiley & Sons Ltd.

  20. Mercury in fish from the Madeira River and health risk to Amazonian and riverine populations.

    Science.gov (United States)

    Soares, José Maria; Gomes, José M; Anjos, Marcelo R; Silveira, Josianne N; Custódio, Flavia B; Gloria, M Beatriz A

    2018-07-01

    The objective of this study was to quantify total mercury in highly popular Amazonian fish pacu, curimatã, jaraqui, and sardinha from the Madeira River and to estimate the exposure to methylmercury from fish consumption. The samples were obtained from two locations - Puruzinho Igarapé and Santa Rosa - near Humaitá, Amazonia, Brazil in two seasons of 2015 (high and low waters). The fish were identified, weighed and measured, and lipids were quantified. Total mercury was determined by gold amalgamation-atomic absorption spectrometry. Mean levels were used to calculate exposure of Amazonian and riverine populations. There was significant correlation (p < 0.05) between length × weight for all fish; length × lipid and weight × lipid were significant only for pacu. Total mercury levels varied along muscle tissue for the fish, except for sardinha; therefore muscle from the dorsal area along the fish were sampled, homogenized and used for analysis. The levels of total mercury varied from 0.01 to 0.46 mg/kg, with higher median levels in sardinha (0.24 mg/kg), followed by curimatã (0.16 mg/kg), jaraqui (0.13 mg/kg) and pacu (0.04 mg/kg), corresponding with the respective feeding habits along the trophic chain. Total mercury levels were not affected by the location of fish capture and by high and low waters seasons. Total mercury correlated significantly with length and weight for jaraqui and with length for sardinha (negative correlation). Total mercury levels in fish complied with legislation; however, exposures to methylmercury from fish consumption overpassed the safe intake reference dose for sardinha for Amazonians; however, for the riverine communities, all of the fish would cause potential health risk, mainly for children and women of childbearing age. Copyright © 2018 Elsevier Ltd. All rights reserved.

  1. Factors affecting the recovery of fish populations in an industrial river. [Brown trout

    Energy Technology Data Exchange (ETDEWEB)

    Turnpenny, A W.M.; Williams, R

    1981-01-01

    The river Ebbw Fawr, an industrial river of South-East Wales, was investigated over a three-year period to follow the re-establishment of fish populations as a result of pollution control measures at coal washeries and a steelworks on the river. These measures were effective in reducing levels of toxic materials and restoring dissolved oxygen levels and pH values acceptable for fish. Five freshwater fish species became established in parts of the river during the study period (1974-77). The brown trout Salmo trutta l. was the first to enter, followed by eel Anguilla anguilla l., stoneloach Noemacheilus barbatulus l., stickleback Gasterosteus aculeatus l. and bullhead Cottus gobio l., respectively. The flounder Platicthys flesus l., a euryhaline species, penetrated the river beyond the upper tidal limit. The minnow Phoxinus phoxinus l., a resident of other parts of the Ebbw system, did not recolonise during the study. Calculated toxicities and the results of fish caging tests indicated that water quality was satisfactory for fish populations throughout the river with the possible exception of a short reach immediately below the steelworks. The absence of fish from some upstream reaches with good water quality was due to the limited numbers of fish available for recolonisation and their restricted movements. Good growth and condition factors among the recolonising brown trout stock suggest that a sport fishery could be developed on the river, though constraints on spawning due to residual silt pollution indicate that stocking with hatchery reared fish will be necessary to maintain trout numbers.

  2. Fish population responses to hydrological variation in a seasonal wetland in southeast México

    Directory of Open Access Journals (Sweden)

    Luis H. Escalera-Vázquez

    2017-06-01

    Full Text Available ABSTRACT Hydrological variation differently affects fish species. In the present study, the response of local populations of 13 fish local species to hydrological variation in a tropical wetland was evaluated. The objectives were to analyze the abundance response of fish species with distinct life history strategies and to assess the role of hydrological variation on fish population patterns. We found that opportunistic strategists were favored by high hydrological variation in drought periods, the equilibrium strategists were related to stable habitats, and periodic strategists were regulated by floods and temperature. However, the life history strategies identified for some species in this study do not correspond to the classification reported in other studies. Our results highlight the importance to study the abundance responses of species at local and regional scales to identify variations in life-history strategies, which can reflect local adaptations of species to hydrological changes, this is useful in order to understand and predict the responses of fish populations to the local environment.

  3. Population dynamics of the invasive fish, Gambusia affinis , in ...

    African Journals Online (AJOL)

    Repeated-measures ANOVA analyses on the catch per unit effort (CPUE) of G. affinis between sampling events and dams revealed significant differences in population dynamics among dams, although an overall trend of rapid increase followed by plateau in summer, with a rapid decline in winter was seen in most dams.

  4. Assessing three fish species ecological status in Colorado River, Grand Canyon based on physical habitat and population models.

    Science.gov (United States)

    Yao, Weiwei; Chen, Yuansheng

    2018-04-01

    Colorado River is a unique ecosystem and provides important ecological services such as habitat for fish species as well as water power energy supplies. River management for this ecosystem requires assessment and decision support tools for fish which involves protecting, restoring as well as forecasting of future conditions. In this paper, a habitat and population model was developed and used to determine the levels of fish habitat suitability and population density in Colorado River between Lees Ferry and Lake Mead. The short term target fish populations are also predicted based on native fish recovery strategy. This model has been developed by combining hydrodynamics, heat transfer and sediment transport models with a habitat suitability index model and then coupling with habitat model into life stage population model. The fish were divided into four life stages according to the fish length. Three most abundant and typical native and non-native fish were selected as target species, which are rainbow trout (Oncorhynchus mykiss), brown trout (Salmo trutta) and flannelmouth sucker (Catostomus latipinnis). Flow velocity, water depth, water temperature and substrates were used as the suitability indicators in habitat model and overall suitability index (OSI) as well as weight usable area (WUA) was used as an indicator in population model. A comparison was made between simulated fish population alteration and surveyed fish number fluctuation during 2000 to 2009. The application of this habitat and population model indicates that this model can be accurate present habitat situation and targets fish population dynamics of in the study areas. The analysis also indicates the flannelmouth sucker population will steadily increase while the rainbow trout will decrease based on the native fish recovery scheme. Copyright © 2018. Published by Elsevier Inc.

  5. Impacts of invasive fish removal through angling on population characteristics and juvenile growth rate.

    Science.gov (United States)

    Evangelista, Charlotte; Britton, Robert J; Cucherousset, Julien

    2015-06-01

    Exploitation can modify the characteristics of fish populations through the selective harvesting of individuals, with this potentially leading to rapid ecological and evolutionary changes. Despite the well-known effects of invasive fishes on aquatic ecosystems generally, the potential effects of their selective removal through angling, a strategy commonly used to manage invasive fish, are poorly understood. The aim of this field-based study was to use the North American pumpkinseed Lepomis gibbosus as the model species to investigate the consequences of selective removal on their population characteristics and juvenile growth rates across 10 populations in artificial lakes in southern France. We found that the maximal individual mass in populations decreased as removal pressure through angling increased, whereas we did not observed any changes in the maximal individual length in populations as removal pressure increased. Total population abundance did not decrease as removal pressure increased; instead, here was a U-shaped relationship between removal pressure and the abundance of medium-bodied individuals. In addition, population biomass had a U-shaped curve response to removal pressure, implying that invasive fish populations can modulate their characteristics to compensate for the negative effects of selective removals. In addition, individual lengths at age 2 and juvenile growth rates decreased as removal pressure through angling increased, suggesting a shift toward an earlier size at maturity and an overall slower growing phenotype. Therefore, these outputs challenge the efficiency of selective management methods, suggesting the use of more proactive strategies to control invasive populations, and the need to investigate the potential ecological and evolutionary repercussions of nonrandom removal.

  6. Proxy measures of fitness suggest coastal fish farms can act as population sources and not ecological traps for wild gadoid fish.

    Directory of Open Access Journals (Sweden)

    Tim Dempster

    Full Text Available BACKGROUND: Ecological traps form when artificial structures are added to natural habitats and induce mismatches between habitat preferences and fitness consequences. Their existence in terrestrial systems has been documented, yet little evidence suggests they occur in marine environments. Coastal fish farms are widespread artificial structures in coastal ecosystems and are highly attractive to wild fish. METHODOLOGY/PRINCIPAL FINDINGS: To investigate if coastal salmon farms act as ecological traps for wild Atlantic cod (Gadus morhua and saithe (Pollachius virens, we compared proxy measures of fitness between farm-associated fish and control fish caught distant from farms in nine locations throughout coastal Norway, the largest coastal fish farming industry in the world. Farms modified wild fish diets in both quality and quantity, thereby providing farm-associated wild fish with a strong trophic subsidy. This translated to greater somatic (saithe: 1.06-1.12 times; cod: 1.06-1.11 times and liver condition indices (saithe: 1.4-1.8 times; cod: 2.0-2.8 times than control fish caught distant from farms. Parasite loads of farm-associated wild fish were modified from control fish, with increased external and decreased internal parasites, however the strong effect of the trophic subsidy overrode any effects of altered loads upon condition. CONCLUSIONS AND SIGNIFICANCE: Proxy measures of fitness provided no evidence that salmon farms function as ecological traps for wild fish. We suggest fish farms may act as population sources for wild fish, provided they are protected from fishing while resident at farms to allow their increased condition to manifest as greater reproductive output.

  7. An examination of the population dynamics of syngnathid fishes within Tampa Bay, Florida, USA

    Directory of Open Access Journals (Sweden)

    Heather D. MASONJONES, Emily ROSE, Lori Benson McRAE,Danielle L. DIXSON

    2010-02-01

    Full Text Available Seagrass ecosystems worldwide have been declining, leading to a decrease in associated fish populations, especially those with low mobility such as syngnathids (pipefish and seahorses. This two-year pilot study investigated seasonal patterns in density, growth, site fidelity, and population dynamics of Tampa Bay (FL syngnathid fishes at a site adjacent to two marinas under construction. Using a modified mark-recapture technique, fish were collected periodically from three closely located sites that varied in seagrass species (Thalassia spp., Syringodium spp., and mixed-grass sites and their distance from open water, but had consistent physical/chemical environmental characteristics. Fish were marked, photographed for body size and gender measurements, and released the same day at the capture site. Of the 5695 individuals surveyed, 49 individuals were recaptured, indicating a large, flexible population. Population density peaks were observed in July of both years, with low densities in late winter and late summer. Spatially, syngnathid densities were highest closest to the mouth of the bay and lowest near the shoreline. Seven species of syngnathid fishes were observed, and species-specific patterns of seagrass use emerged during the study. However, only two species, Syngnathus scovelli and Hippocampus zosterae, were observed at high frequencies. For these two species, body size decreased across the study period, but while S. scovelli’s population density decreased, H. zosterae’s increased. Across six of the seven species, population size declined over the course of this preliminary study; however, seasonal shifts were impossible to distinguish from potential anthropogenic effects of construction [Current Zoology 56 (1: 118–133, 2010].

  8. Population structure of fishes from an urban stream

    Directory of Open Access Journals (Sweden)

    Naiara Zanatta

    2017-05-01

    Full Text Available The aim of this study was to identify the population structure of the ichthyofauna in an urban stream within an environmental protection area in southern Brazil. Quarterly samplings were conducted between October 2009 and August 2010. Poecilia reticulata was the most abundant species, followed by Hypostomus ancistroides and Rhamdia quelen. It was found a higher proportion of adults instead of juveniles from P. reticulata and R. quelen populations, while the opposite was recorded for H. ancistroides. Sex ratio of 1:1 was found for H. ancistroides, but differed significantly for P. reticulata and R. quelen. Females of P. reticulata and R. quelen reached higher length than males in the smaller and higher length-classes, while H. ancistroides females were only longer in initial length-classes. It was recorded higher occurrence of mature and maturing individuals. Mature individuals of H. ancistroides were sampled in October, and P. reticulata and R. quelen throughout the sampling period. Despite adverse environmental conditions, the occurrence of juveniles indicates reproductive activity for these species. Population structure studies in degraded systems are urgent, since life-history features of species may suffer changes due to anthropic impacts. Providing such information contributes to decision making and management of degraded systems.

  9. Fish consumption, not fatty acid status, is related to quality of life in a healthy population

    NARCIS (Netherlands)

    Schiepers, Olga; De Groot, Renate; Jolles, Jelle; Van Boxtel, Martin

    2010-01-01

    Schiepers, O. J., De Groot, R. H. M., Jolles, J., & Van Boxtel, M. P. J. (2010). Fish consumption, not fatty acid status, is related to quality of life in a healthy population. Prostaglandins Leukot Essent Fatty Acids, 83(1), 31-35.

  10. Estuarine fish biodiversity of Socotra Island (N.W. Indian Ocean): from the fish community to the functioning of Terapon jarbua populations

    OpenAIRE

    Lavergne, Edouard

    2012-01-01

    Understanding connectivity between estuarine nurseries and marine habitats is fundamental to explore fish population dynamics and to the design of effective conservation and fisheries management strategies. The aim of this work was to provide the first faunistic and ecological baseline of Socotra Island (North-Western Indian Ocean) estuaries and lagoon fishes for governmental coastal managers and decision makers, with a particular focus on the population functioning of a sentinel species: Ter...

  11. Cell population structure prior to bifurcation predicts efficiency of directed differentiation in human induced pluripotent cells.

    Science.gov (United States)

    Bargaje, Rhishikesh; Trachana, Kalliopi; Shelton, Martin N; McGinnis, Christopher S; Zhou, Joseph X; Chadick, Cora; Cook, Savannah; Cavanaugh, Christopher; Huang, Sui; Hood, Leroy

    2017-02-28

    Steering the differentiation of induced pluripotent stem cells (iPSCs) toward specific cell types is crucial for patient-specific disease modeling and drug testing. This effort requires the capacity to predict and control when and how multipotent progenitor cells commit to the desired cell fate. Cell fate commitment represents a critical state transition or "tipping point" at which complex systems undergo a sudden qualitative shift. To characterize such transitions during iPSC to cardiomyocyte differentiation, we analyzed the gene expression patterns of 96 developmental genes at single-cell resolution. We identified a bifurcation event early in the trajectory when a primitive streak-like cell population segregated into the mesodermal and endodermal lineages. Before this branching point, we could detect the signature of an imminent critical transition: increase in cell heterogeneity and coordination of gene expression. Correlation analysis of gene expression profiles at the tipping point indicates transcription factors that drive the state transition toward each alternative cell fate and their relationships with specific phenotypic readouts. The latter helps us to facilitate small molecule screening for differentiation efficiency. To this end, we set up an analysis of cell population structure at the tipping point after systematic variation of the protocol to bias the differentiation toward mesodermal or endodermal cell lineage. We were able to predict the proportion of cardiomyocytes many days before cells manifest the differentiated phenotype. The analysis of cell populations undergoing a critical state transition thus affords a tool to forecast cell fate outcomes and can be used to optimize differentiation protocols to obtain desired cell populations.

  12. Overestimating fish counts by non-instantaneous visual censuses: consequences for population and community descriptions.

    Directory of Open Access Journals (Sweden)

    Christine Ward-Paige

    Full Text Available BACKGROUND: Increasingly, underwater visual censuses (UVC are used to assess fish populations. Several studies have demonstrated the effectiveness of protected areas for increasing fish abundance or provided insight into the natural abundance and structure of reef fish communities in remote areas. Recently, high apex predator densities (>100,000 individuals x km(-2 and biomasses (>4 tonnes x ha(-1 have been reported for some remote islands suggesting the occurrence of inverted trophic biomass pyramids. However, few studies have critically evaluated the methods used for sampling conspicuous and highly mobile fish such as sharks. Ideally, UVC are done instantaneously, however, researchers often count animals that enter the survey area after the survey has started, thus performing non-instantaneous UVC. METHODOLOGY/PRINCIPAL FINDINGS: We developed a simulation model to evaluate counts obtained by divers deploying non-instantaneous belt-transect and stationary-point-count techniques. We assessed how fish speed and survey procedure (visibility, diver speed, survey time and dimensions affect observed fish counts. Results indicate that the bias caused by fish speed alone is huge, while survey procedures had varying effects. Because the fastest fishes tend to be the largest, the bias would have significant implications on their biomass contribution. Therefore, caution is needed when describing abundance, biomass, and community structure based on non-instantaneous UVC, especially for highly mobile species such as sharks. CONCLUSIONS/SIGNIFICANCE: Based on our results, we urge that published literature state explicitly whether instantaneous counts were made and that survey procedures be accounted for when non-instantaneous counts are used. Using published density and biomass values of communities that include sharks we explore the effect of this bias and suggest that further investigation may be needed to determine pristine shark abundances and the

  13. Importance of the habitat choice behavior assumed when modeling the effects of food and temperature on fish populations

    Science.gov (United States)

    Wildhaber, Mark L.; Lamberson, Peter J.

    2004-01-01

    Various mechanisms of habitat choice in fishes based on food and/or temperature have been proposed: optimal foraging for food alone; behavioral thermoregulation for temperature alone; and behavioral energetics and discounted matching for food and temperature combined. Along with development of habitat choice mechanisms, there has been a major push to develop and apply to fish populations individual-based models that incorporate various forms of these mechanisms. However, it is not known how the wide variation in observed and hypothesized mechanisms of fish habitat choice could alter fish population predictions (e.g. growth, size distributions, etc.). We used spatially explicit, individual-based modeling to compare predicted fish populations using different submodels of patch choice behavior under various food and temperature distributions. We compared predicted growth, temperature experience, food consumption, and final spatial distribution using the different models. Our results demonstrated that the habitat choice mechanism assumed in fish population modeling simulations was critical to predictions of fish distribution and growth rates. Hence, resource managers who use modeling results to predict fish population trends should be very aware of and understand the underlying patch choice mechanisms used in their models to assure that those mechanisms correctly represent the fish populations being modeled.

  14. Fish population studies using parasites from the Southeastern Pacific Ocean: considering host population changes and species body size as sources of variability of parasite communities.

    Science.gov (United States)

    George-Nascimento, Mario; Oliva, Marcelo

    2015-01-01

    Research using parasites in fish population studies in the South Eastern Pacific (SEP) is summarized. There are 27 such studies (snapshots mainly) in single host species sampled at different geographic localities and at somewhat similar times. They have been devoted mainly to economically important species, though others on coastal and intertidal fish or on less- or non-commercial species provide insights on scales of temporal and spatial variation of parasite infracommunities. Later, we assess whether the probability of harbouring parasites depends on the host species body size. Our results indicate that a stronger tool for fish population studies may be developed under regular (long term) scrutiny of parasite communities, especially of small fish host species, due to their larger variability in richness, abundance and total biomass, than in large fish species. Finally, it might also be necessary to consider the effects of fishing on parasite communities as well as the natural oscillations (coupled or not) of host and parasite populations.

  15. Population persistence of stream fish in response to environmental change: integrating data and models across space

    Science.gov (United States)

    Letcher, B. H.; Schueller, P.; Bassar, R.; Coombs, J.; Rosner, A.; Sakrejda, K.; Kanno, Y.; Whiteley, A.; Nislow, K. H.

    2013-12-01

    For stream fishes, environmental variation is a key driver of individual body growth/movement/survival and, by extension, population dynamics. Identifying how stream fish respond to environmental variation can help clarify mechanisms responsible for population dynamics and can help provide tools to forecast relative resilience of populations across space. Forecasting dynamics across space is challenging, however, because it can be difficult to conduct enough studies with enough intensity to fully characterize broad-scale population response to environmental change. We have adopted a multi-scale approach, using detailed individual-based studies and analyses (integral projection matrix) to determine sensitivities of population growth to environmental variation combined with broad spatial data and analyses (occupancy and abundance models) to estimate patterns of population response across space. Population growth of brook trout was most sensitive to stream flow in the spring and winter, most sensitive to stream temperature in the fall and sensitive to both flow and temperature in the summer. High flow in the spring and winter had negative effects on population growth while high temperature had a negative effect in the fall. Flow had no effect when it was cold, but a positive effect when it was warm in the summer. Combined with occupancy and abundance models, these data give insight into the spatial structure of resilient populations and can help guide prioritization of management actions.

  16. Fish populations in a large group of acid-stressed lakes

    Energy Technology Data Exchange (ETDEWEB)

    Harvey, H H

    1975-01-01

    The purpose of this study was to determine the effects of environmental stress on the number and diversity of fish species in a group of acid-stressed lakes. The study area was the La Cloche Mountains, a series of quartzite ridges covering 1,300 km/sup 2/ along the north shore of Georgian Bay and north channel of Lake Huron. Within these ridges are 173 lakes; 68 of the largest of these made up the study sample. The lakes of the La Cloche Mountains are undergoing rapid acidification. Coincident with this there has been the loss of sport fishes from several lakes. Lakes such as Nellie, Lumsden, O.S.A., Acid and Killarney supported good sport fisheries for the lake trout, (Salvelinus namaycush) for many years, but have ceased to do so in the last 5 to 15 years. Other sport fishes, notably the walleye (Stizostedion vitreum) and smallmouth bass (micropterus dolomieu) have disappeared from some of the La Cloche Lakes. Thus recreational fishing alone could not have been the cause of the change. Beamish (1974) recorded the extreme sparcity of the three remaining fish species in O.S.A. Lake. Many of the lakes of the La Cloche mountains are accessible only with difficulty and little or no information exists for these lakes prior to this study. This precluded simple comparison of these lakes before and during acidification. This lack of historic data determined in part the approach taken in this study; a comparison of the fish communities of a group of lakes differing in degree of acid stress.

  17. GENETIC VARIABILITY OF THREE POPULATIONS OF FLYING FISH, Hirundichthy oxycephalus FROM MAKASSAR STRAIT

    Directory of Open Access Journals (Sweden)

    Andi Parenrengi

    2016-03-01

    Full Text Available Flying fish, Hirundichthy oxycephalus is one of economically important marine species to Indonesia, particularly in Makassar Strait and Flores Sea. However, there is a limited published data on genetic variation in molecular marker level of this species. Random Amplified Polymorphic DNA (RAPD was employed in this study to determine the genetic variability of three populations of flying fish collected from Takalar, Pare-Pare, and Majene in Makassar Strait. Genomic DNA was isolated from preserved muscle tissue using phenol-chloroform technique. Two selected arbitrary primers (CA-01 and P-40 were performed to generate RAPD finger printing of flying fish populations. The two primers generated a total of 81 fragments (loci and 50 polymorphic fragments with size ranging from 125 to 1,250 bp. There were no significant differences in number of fragment and number of polymorphic fragment among populations. The high polymorphism (63.5±7.4% was obtained from Takalar population followed by Pare-Pare (58.3±19.6% and Majene population (57.7±0.8%. Similarity index of individuals was 0.60±0.17 for Takalar, 0.63±0.17 for Majene and 0.75±0.21 for Pare-Pare population. Seven fragments were identified as species-specific markers of H. oxycephalus. The UPGMA cluster analysis showed that the Takalar population was genetically closer to Pare-Pare population (D= 0.0812 than to Majene population (D= 0.1873.

  18. Study of physiological and genotoxic status of fish populations of Azerbaijan shore of the Caspian sea

    International Nuclear Information System (INIS)

    Kasimov, R.Yu.; Palatnikov, G.M.; Mekhtiev, A.A.

    2005-01-01

    Full text : According to the studies conducted on Ecotox program of Caspian Ecological program, littoral waters of Azerbaijan and Iran are characterized with high content of heavy metals and organic compounds. Actually, all these substances are not just toxicants but mutagens as well. Taking into account these considerations, it appears important to be aware of physiological and genotoxic status of fish populations dwelling along Azerbaijan shore of the Caspian Sea for present time. The purpose of proposed project is collecting data concerning actual physiological and genotoxic status of fish populations dwelling in the littoral zone of Azerbaijan shore of the Caspian Sea. That will present the real picture of ecological status of ichtyofauna in Azerbaijan sector of the Caspian Sea and give grounds to conduct comparative analysis of changes while conducting all kinds of activities in the sea with the data provided within this project's frames. For this purpose we offer to conduct studies of fish populations along Azerbaijan littoral zone of the Caspian Sea beginning from north ones, sharing all shore into 5-6 points where fish catches should be done. Not less than 5 specimens of attached-dwelling fish, for instance gobies, are planned to catch in each of defined points. Blood samples for genotoxic analysis and samples of muscles, livers and gills for immunochemical and histopathological analysis will be taken. Along with this in these points the analysis of water - oxygen content, ph, salinity, temperature will be realized. Physiological status of fish will be evaluated by determination of serotonin-modulating protein content in ELISA-test. This analysis gives precise estimation of serotonergic system status that is very sensitive to adverse conditions. The second test - histopathological tissue studies gives grounds to determine functional status of internal organs of caught fish. The third test - micronuclei counting in erythrocytes. This technique allows

  19. Population Dynamic Of Rabbit Fish Siganus Canaliculatus In Gulf Of Bone Luwu Regency South Sulawesi

    Directory of Open Access Journals (Sweden)

    Irman Halid

    2015-08-01

    Full Text Available Rabbitfish Siganus canaliculatus is ones of coral reef inhabitants are exploited intensively and suspected population decline so the necessary management measures was needed. The study aims to analyze aspects of the dynamics of rabbit fish populations in the Bone Gulf Luwu waters. Data was collected by Staratied Random Sampling estimation of the size structure the number of age groups and average length of fish per age group use a column diagram and Bhattacharya method. Population growth is analyzed using the Von Bertalanffy equation exponential growth the value of L K by Ford and Walford method and t0 by Pauly method. The total mortality fishing mortality the rate of exploitation and Y R were estimated by methods of Beverton and Holt and natural mortality by method of Pauly. The results showed that the population of rabbit fish in the waters of the Gulf of Bone Luwu consists of five age groups has the average length and the lenth range of 8.0904 cm and 5.7 to 9.0 cm on the relative age of one year 10.9222 cm and 9.0 to 12.3 cm on the relative age of two years from 12.3 to 15.6 cm 14.1543 cm on the relative age of three years 16.8949 cm and 15.6 to 18.9 cm on the relative age four years and 19.4906 cm and 18.9 to 20.7 cm on the relative age of five years. Maximum length Lamp8734 of 30.5814 cm and the growth rate coefficient K of 0.1572 per year while the t0 value of -1.4815 ofyear. The total mortality Z of 1.6913 per year the mortality M of 0.6109 fishing mortality t 1.0804 per year the rate of exploitation E of 0.6388 and optimal exploitation rate Eopt of 0.50 the value of Y R is now 0.0127 and the value of Y R optimal 0.0150. The conclusion that the population is dominated medium sized fish slow population growth as a result of the high mortality rate of the capture and exploitation as well as the recruitment process is not optimal.

  20. A moving target--incorporating knowledge of the spatial ecology of fish into the assessment and management of freshwater fish populations.

    Science.gov (United States)

    Cooke, Steven J; Martins, Eduardo G; Struthers, Daniel P; Gutowsky, Lee F G; Power, Michael; Doka, Susan E; Dettmers, John M; Crook, David A; Lucas, Martyn C; Holbrook, Christopher M; Krueger, Charles C

    2016-04-01

    Freshwater fish move vertically and horizontally through the aquatic landscape for a variety of reasons, such as to find and exploit patchy resources or to locate essential habitats (e.g., for spawning). Inherent challenges exist with the assessment of fish populations because they are moving targets. We submit that quantifying and describing the spatial ecology of fish and their habitat is an important component of freshwater fishery assessment and management. With a growing number of tools available for studying the spatial ecology of fishes (e.g., telemetry, population genetics, hydroacoustics, otolith microchemistry, stable isotope analysis), new knowledge can now be generated and incorporated into biological assessment and fishery management. For example, knowing when, where, and how to deploy assessment gears is essential to inform, refine, or calibrate assessment protocols. Such information is also useful for quantifying or avoiding bycatch of imperiled species. Knowledge of habitat connectivity and usage can identify critically important migration corridors and habitats and can be used to improve our understanding of variables that influence spatial structuring of fish populations. Similarly, demographic processes are partly driven by the behavior of fish and mediated by environmental drivers. Information on these processes is critical to the development and application of realistic population dynamics models. Collectively, biological assessment, when informed by knowledge of spatial ecology, can provide managers with the ability to understand how and when fish and their habitats may be exposed to different threats. Naturally, this knowledge helps to better evaluate or develop strategies to protect the long-term viability of fishery production. Failure to understand the spatial ecology of fishes and to incorporate spatiotemporal data can bias population assessments and forecasts and potentially lead to ineffective or counterproductive management actions.

  1. THE EFFECT OF CUTANEOUS SECRETIONS OF CYPRINIDAE FISH ON PATHOGENIC BACTERIA ERYSIPELOTHRIX RHUSIOPATHIAE POPULATIONS

    Directory of Open Access Journals (Sweden)

    O. Gulay

    2014-09-01

    Full Text Available Purpose. To investigate the effect of cutaneous secretions of Cyprinidae fish on the populations of pathogenic bacteria Erysipelothrix rhusiopathiae. Methodology. Pieces of filter paper were placed on the skin of live fish. After a 1 min. exposure, they were removed and placed in glass tubes for the extraction of water-soluble components. Tap water was used as a solvent (previously settled for 48 hours; 0,1 cm3 of water were needed for 1 cm2 area of the filter paper. After extraction, the aqueous solution of fish cutaneous secretions was sterilized by filtering it through filters with pore diameter <0,2 µm. The test was carried out with cultures of E. rhusiopathiae bacteria, which were incubated on heart-brain broth at a temperature of +36,7 ± 0,3 °С for 48-hours. After adding the sterilized tap water and cultures of E. rhusiopathiae bacteria, test samples contained fish cutaneous secretions at following ratios: 1:10, 1:100, 1:1000, 1:10000. As a control, sterilized tap water and E. rhusiopathiae bacteria at ratios similar to test samples were used. In 48 hours, samples were taken from the specimens cultured at a temperature of +18...+20 °С for determination of cell density in E. rhusiopathiae populations. Findings. Aquatic environment, which contains the secretions of skin glands of certain Cyprinidae species, creates favorable conditions for the reproduction and increase in the density of pathogenic E. rhusiopathiae populations. In the conditions of freshwater ecosystems, direct topical biocenotical and trophic relations may be created between pathogenic E. rhusiopathiae bacteria and the studied fish species (рrussian carp Carassius auratus gibelio and wild carp Cyprinus. Originality. For the first time we obtained the quantitative data that demonstrate a stimulating effect of cutaneous secretions of certain fish species on pathogenic E. rhusiopathiae populations. Practical value. The stimulating effect of cutaneous secretions of some

  2. Distance, dams and drift: What structures populations of an endangered, benthic stream fish?

    Science.gov (United States)

    Roberts, James H.; Angermeier, Paul; Hallerman, Eric M.

    2013-01-01

    Spatial population structure plays an important role in species persistence, evolution and conservation. Benthic stream fishes are diverse and frequently imperilled, yet the determinants and spatial scaling of their population structure are understudied. We investigated the range-wide population genetic structure of Roanoke logperch (Percina rex), an endangered, benthic stream fish of the eastern United States. Fish were sampled from 35 sites and analysed at 11 microsatellite DNA loci. Clustering models were used to sort individuals into genetically cohesive groups and thereby estimate the spatial scaling of population structure. We then used Bayesian generalized linear mixed models (BGLMMs) to test alternative hypotheses about the environmental factors most responsible for generating structure, as measured by the differentiation statistic FST. Clustering models delineated seven discrete populations, whose boundaries coincided with agents of fragmentation, including hydroelectric dams and tailwaters. In the absence of hydrological barriers, gene flow was extensive throughout catchments, whereas there was no evidence for contemporary dispersal between catchments across barriers. In the best-supported BGLMM, FST was positively related to the spatial distance and degree of hydrological alteration between sites and negatively related to genetic diversity within sites. Whereas the effect of tailwaters was equivocal, dams strongly influenced differentiation: the effect of a dam on FST was comparable to that of a between-site distance of over 1200 km of unimpounded river. Overall, the effect of distance-mediated dispersal was negligible compared to the combined effects of fragmentation and genetic drift. The contemporary population structure of P. rex comprises a few geographically extensive ‘islands’ that are fragmented by hydroelectric projects. This information clarifies the importance of a catchment-scale perspective on conserving the species and

  3. The Impact of Marine Protected Areas on Reef-Wide Population Structure and Fishing-Induced Phenotypes in Coral-Reef Fishes

    Science.gov (United States)

    Fidler, Robert Young, III

    Overfishing and destructive fishing practices threaten the sustainability of fisheries worldwide. In addition to reducing population sizes, anthropogenic fishing effort is highly size-selective, preferentially removing the largest individuals from harvested stocks. Intensive, size-selective mortality induces widespread phenotypic shifts toward the predominance of smaller and earlier-maturing individuals. Fish that reach sexual maturity at smaller size and younger age produce fewer, smaller, and less viable larvae, severely reducing the reproductive capacity of exploited populations. These directional phenotypic alterations, collectively known as "fisheries-induced evolution" (FIE) are among the primary causes of the loss of harvestable fish biomass. Marine protected areas (MPAs) are one of the most widely utilized components of fisheries management programs around the world, and have been proposed as a potential mechanism by which the impacts of FIE may be mitigated. The ability of MPAs to buffer exploited populations against fishing pressure, however, remains debated due to inconsistent results across studies. Additionally, empirical evidence of phenotypic shifts in fishes within MPAs is lacking. This investigation addresses both of these issues by: (1) using a categorical meta-analysis of MPAs to standardize and quantify the magnitude of MPA impacts across studies; and (2) conducting a direct comparison of life-history phenotypes known to be influenced by FIE in six reef-fish species inside and outside of MPAs. The Philippines was used as a model system for analyses due to the country's significance in global marine biodiversity and reliance on MPAs as a fishery management tool. The quantitative impact of Philippine MPAs was assessed using a "reef-wide" meta-analysis. This analysis used pooled visual census data from 39 matched pairs of MPAs and fished reefs surveyed twice over a mean period of 3 years. In 17 of these MPAs, two additional surveys were conducted

  4. Higher freshwater fish and sea fish intake is inversely associated with colorectal cancer risk among Chinese population: a case-control study

    OpenAIRE

    Xu, Ming; Fang, Yu-Jing; Chen, Yu-Ming; Lu, Min-Shan; Pan, Zhi-Zhong; Yan, Bo; Zhong, Xiao; Zhang, Cai-Xia

    2015-01-01

    The association between specific fish intake and colorectal cancer risk remains controversial. This study aimed to examine the association between specific fish intake and colorectal cancer risk in Chinese population in a large case control study. During July 2010 to November 2014, 1189 eligible colorectal cancer cases and 1189 frequency-matched controls (age and sex) completed in-person interviews. A validated food frequency questionnaire was used to estimate dietary intake. Multivariate log...

  5. Assessment of fish populations and habitat on Oculina Bank, a deep-sea coral marine protected area off eastern Florida

    OpenAIRE

    Harter , Stacey L.; Ribera, Marta M.; Shepard, Andrew N.; Reed, John K.

    2009-01-01

    A portion of the Oculina Bank located off eastern Florida is a marine protected area (MPA) preserved for its dense populations of the ivory tree coral (Oculina varicosa), which provides important habitat for fish. Surveys of fish assemblages and benthic habitat were conducted inside and outside the MPA in 2003 and 2005 by using remotely operated vehicle video transects and digital still imagery. Fish species composition, biodiversity, and grouper densities were used to determine w...

  6. Serum apolipoproteins in relation to intakes of fish in population of Arkhangelsk County

    Directory of Open Access Journals (Sweden)

    Petrenya Natalia

    2012-06-01

    Full Text Available Abstract Background Diets rich in omega-3 fatty acids and low in saturated fat were found beneficially associated with blood lipids and cardio-vascular health. Lean reindeer meet and local cold water white-fish species high in omega-3 are among the main sources of nutrients in the rural area of the Nenets Autonomous Okrug (NAO in Russia and are not normally consumed by the urban population from the same region. The aims of the study were firstly, to compare serum lipid profiles of residents of urban (Arkhangelsk city and rural (NAO regions of Arkhangelsk County, and secondly, to investigate the effects of fish consumption on the predictor of cardiovascular events apolipoprotein (Apo B/ApoA-I ratio in these populations. Methods A cross-sectional study conducted in Arkhangelsk County, Russia. Sample size of 249 adults: 132 subjects from Arkhangelsk city, aged 21–70 and 117 subject (87% Ethnic Nenets from NAO, aged 18–69. Results We observed more favorable lipid levels in NAO compared to Arkhangelsk participants. Age-adjusted geometric means of ApoB/ApoA-I ratio were 1.02 and 0.98 in men and women from Arkhangelsk; 0.84 and 0.91 in men and women from NAO respectively. Age and consumption of animal fat were positively associated with ApoB/ApoA-I ratio in women (pooled samples from Arkhangelsk and NAO. Body mass index and low levels of physical activity were positively associated with ApoB/ApoA-I ratio in men (pooled samples from Arkhangelsk and NAO. Reported oily fish consumption was not significantly correlated with ApoB/ApoA-I ratio. Conclusion The population sample from rural NAO, consisting largely of the indigenous Arctic population Nenets with healthier dietary sources, had a relatively less atherogenic lipid profile compared to the urban Arkhangelsk group. Fish consumption had no effect on apolipoproteins profile.

  7. Master Middle Ware: A Tool to Integrate Water Resources and Fish Population Dynamics Models

    Science.gov (United States)

    Yi, S.; Sandoval Solis, S.; Thompson, L. C.; Kilduff, D. P.

    2017-12-01

    Linking models that investigate separate components of ecosystem processes has the potential to unify messages regarding management decisions by evaluating potential trade-offs in a cohesive framework. This project aimed to improve the ability of riparian resource managers to forecast future water availability conditions and resultant fish habitat suitability, in order to better inform their management decisions. To accomplish this goal, we developed a middleware tool that is capable of linking and overseeing the operations of two existing models, a water resource planning tool Water Evaluation and Planning (WEAP) model and a habitat-based fish population dynamics model (WEAPhish). First, we designed the Master Middle Ware (MMW) software in Visual Basic for Application® in one Excel® file that provided a familiar framework for both data input and output Second, MMW was used to link and jointly operate WEAP and WEAPhish, using Visual Basic Application (VBA) macros to implement system level calls to run the models. To demonstrate the utility of this approach, hydrological, biological, and middleware model components were developed for the Butte Creek basin. This tributary of the Sacramento River, California is managed for both hydropower and the persistence of a threatened population of spring-run Chinook salmon (Oncorhynchus tschawytscha). While we have demonstrated the use of MMW for a particular watershed and fish population, MMW can be customized for use with different rivers and fish populations, assuming basic data requirements are met. This model integration improves on ad hoc linkages for managing data transfer between software programs by providing a consistent, user-friendly, and familiar interface across different model implementations. Furthermore, the data-viewing capabilities of MMW facilitate the rapid interpretation of model results by hydrologists, fisheries biologists, and resource managers, in order to accelerate learning and management decision

  8. Artificial barriers prevent genetic recovery of small isolated populations of a low-mobility freshwater fish.

    Science.gov (United States)

    Coleman, R A; Gauffre, B; Pavlova, A; Beheregaray, L B; Kearns, J; Lyon, J; Sasaki, M; Leblois, R; Sgro, C; Sunnucks, P

    2018-01-12

    Habitat loss and fragmentation often result in small, isolated populations vulnerable to environmental disturbance and loss of genetic diversity. Low genetic diversity can increase extinction risk of small populations by elevating inbreeding and inbreeding depression, and reducing adaptive potential. Due to their linear nature and extensive use by humans, freshwater ecosystems are especially vulnerable to habitat loss and fragmentation. Although the effects of fragmentation on genetic structure have been extensively studied in migratory fishes, they are less understood in low-mobility species. We estimated impacts of instream barriers on genetic structure and diversity of the low-mobility river blackfish (Gadopsis marmoratus) within five streams separated by weirs or dams constructed 45-120 years ago. We found evidence of small-scale (barriers, as expected for a fish with low mobility. Genetic diversity was lower above barriers in small streams only, regardless of barrier age. In particular, one isolated population showed evidence of a recent bottleneck and inbreeding. Differentiation above and below the barrier (F ST  = 0.13) was greatest in this stream, but in other streams did not differ from background levels. Spatially explicit simulations suggest that short-term barrier effects would not be detected with our data set unless effective population sizes were very small (barriers is reduced and requires more genetic markers compared to panmictic populations. We also demonstrate the importance of accounting for natural population genetic structure in fragmentation studies.

  9. Fish population genetic structure shaped by hydroelectric power plants in the upper Rhine catchment.

    Science.gov (United States)

    Gouskov, Alexandre; Reyes, Marta; Wirthner-Bitterlin, Lisa; Vorburger, Christoph

    2016-02-01

    The Rhine catchment in Switzerland has been transformed by a chain of hydroelectric power stations. We addressed the impact of fragmentation on the genetic structure of fish populations by focusing on the European chub (Squalius cephalus). This fish species is not stocked and copes well with altered habitats, enabling an assessment of the effects of fragmentation per se. Using microsatellites, we genotyped 2133 chub from 47 sites within the catchment fragmented by 37 hydroelectric power stations, two weirs and the Rhine Falls. The shallow genetic population structure reflected drainage topology and was affected significantly by barriers to migration. The effect of power stations equipped with fishpasses on genetic differentiation was detectable, albeit weaker than that of man-made barriers without fishpasses. The Rhine Falls as the only long-standing natural obstacle (formed 14 000 to 17 000 years ago) also had a strong effect. Man-made barriers also exacerbated the upstream decrease in allelic diversity in the catchment, particularly when lacking fishpasses. Thus, existing fishpasses do have the desired effect of mitigating fragmentation, but barriers still reduce population connectivity in a fish that traverses fishpasses better than many other species. Less mobile species are likely to be affected more severely.

  10. Biomarkers in natural fish populations indicate adverse biological effects of offshore oil production.

    Directory of Open Access Journals (Sweden)

    Lennart Balk

    Full Text Available Despite the growing awareness of the necessity of a sustainable development, the global economy continues to depend largely on the consumption of non-renewable energy resources. One such energy resource is fossil oil extracted from the seabed at offshore oil platforms. This type of oil production causes continuous environmental pollution from drilling waste, discharge of large amounts of produced water, and accidental spills.Samples from natural populations of haddock (Melanogrammus aeglefinus and Atlantic cod (Gadus morhua in two North Sea areas with extensive oil production were investigated. Exposure to and uptake of polycyclic aromatic hydrocarbons (PAHs were demonstrated, and biomarker analyses revealed adverse biological effects, including induction of biotransformation enzymes, oxidative stress, altered fatty acid composition, and genotoxicity. Genotoxicity was reflected by a hepatic DNA adduct pattern typical for exposure to a mixture of PAHs. Control material was collected from a North Sea area without oil production and from remote Icelandic waters. The difference between the two control areas indicates significant background pollution in the North Sea.It is most remarkable to obtain biomarker responses in natural fish populations in the open sea that are similar to the biomarker responses in fish from highly polluted areas close to a point source. Risk assessment of various threats to the marine fish populations in the North Sea, such as overfishing, global warming, and eutrophication, should also take into account the ecologically relevant impact of offshore oil production.

  11. Evidence of population resistance to extreme low flows in a fluvial-dependent fish species

    Science.gov (United States)

    Katz, Rachel A.; Freeman, Mary C.

    2015-01-01

    Extreme low streamflows are natural disturbances to aquatic populations. Species in naturally intermittent streams display adaptations that enhance persistence during extreme events; however, the fate of populations in perennial streams during unprecedented low-flow periods is not well-understood. Biota requiring swift-flowing habitats may be especially vulnerable to flow reductions. We estimated the abundance and local survival of a native fluvial-dependent fish species (Etheostoma inscriptum) across 5 years encompassing historic low flows in a sixth-order southeastern USA perennial river. Based on capturemark-recapture data, the study shoal may have acted as a refuge during severe drought, with increased young-of-the-year (YOY) recruitment and occasionally high adult immigration. Contrary to expectations, summer and autumn survival rates (30 days) were not strongly depressed during low-flow periods, despite 25%-80% reductions in monthly discharge. Instead, YOY survival increased with lower minimum discharge and in response to small rain events that increased low-flow variability. Age-1+ fish showed the opposite pattern, with survival decreasing in response to increasing low-flow variability. Results from this population dynamics study of a small fish in a perennial river suggest that fluvial-dependent species can be resistant to extreme flow reductions through enhanced YOY recruitment and high survival

  12. Complex small pelagic fish population patterns arising from individual behavioral responses to their environment

    Science.gov (United States)

    Brochier, Timothée; Auger, Pierre-Amaël; Pecquerie, Laure; Machu, Eric; Capet, Xavier; Thiaw, Modou; Mbaye, Baye Cheikh; Braham, Cheikh-Baye; Ettahiri, Omar; Charouki, Najib; Sène, Ousseynou Ndaw; Werner, Francisco; Brehmer, Patrice

    2018-05-01

    Small pelagic fish (SPF) species are heavily exploited in eastern boundary upwelling systems (EBUS) as their transformation products are increasingly used in the world's food chain. Management relies on regular monitoring, but there is a lack of robust theories for the emergence of the populations' traits and their evolution in highly variable environments. This work aims to address existing knowledge gaps by combining physical and biogeochemical modelling with an individual life-cycle based model applied to round sardinella (Sardinella aurita) off northwest Africa, a key species for regional food security. Our approach focused on the processes responsible for seasonal migrations, spatio-temporal size-structure, and interannual biomass fluctuations. Emergence of preferred habitat resulted from interactions between natal homing behavior and environmental variability that impacts early life stages. Exploration of the environment by the fishes was determined by swimming capabilities, mesoscale to regional habitat structure, and horizontal currents. Fish spatio-temporal abundance variability emerged from a complex combination of distinct life-history traits. An alongshore gradient in fish size distributions is reported and validated by in situ measurements. New insights into population structure are provided, within an area where the species is abundant year-round (Mauritania) and with latitudinal migrations of variable (300-1200 km) amplitude. Interannual biomass fluctuations were linked to modulations of fish recruitment over the Sahara Bank driven by variability in alongshore current intensity. The identified processes constitute an analytical framework that can be implemented in other EBUS and used to explore impacts of regional climate change on SPF.

  13. Assessing the impact of power plant mortality on the compensatory reserve of fish populations

    International Nuclear Information System (INIS)

    Goodyear, C.P.

    1977-01-01

    A technique is presented to quantify the concepts of compensation and compensatory reserve in exploited fish populations. The technique was used to examine the impact of power plant mortality on a hypothetical striped bass population. Power plant mortality had a more severe impact on the compensation ratio and compensatory reserve for an exploited stock. The technique can be applied to determine a critical compensation ratio which could serve as a standard against which additional sources of mortality, such as those caused by power plants, could be measured

  14. Estimation of age structure of fish populations from length-frequency data

    International Nuclear Information System (INIS)

    Kumar, K.D.; Adams, S.M.

    1977-01-01

    A probability model is presented to determine the age structure of a fish population from length-frequency data. It is shown that when the age-length key is available, maximum-likelihood estimates of the age structure can be obtained. When the key is not available, approximate estimates of the age structure can be obtained. The model is used for determination of the age structure of populations of channel catfish and white crappie. Practical applications of the model to impact assessment are discussed

  15. Life cycle ecophysiology of small pelagic fish and climate-driven changes in populations

    Science.gov (United States)

    Peck, Myron A.; Reglero, Patricia; Takahashi, Motomitsu; Catalán, Ignacio A.

    2013-09-01

    Due to their population characteristics and trophodynamic role, small pelagic fishes are excellent bio-indicators of climate-driven changes in marine systems world-wide. We argue that making robust projections of future changes in the productivity and distribution of small pelagics will require a cause-and-effect understanding of historical changes based upon physiological principles. Here, we reviewed the ecophysiology of small pelagic (clupeiform) fishes including a matrix of abiotic and biotic extrinsic factors (e.g., temperature, salinity, light, and prey characteristics) and stage-specific vital rates: (1) adult spawning, (2) survival and development of eggs and yolk sac larvae, and (3) feeding and growth of larvae, post-larvae and juveniles. Emphasis was placed on species inhabiting Northwest Pacific and Northeast Atlantic (European) waters for which summary papers are particularly scarce compared to anchovy and sardine in upwelling systems. Our review revealed that thermal niches (optimal and sub-optimal ranges in temperatures) were species- and stage-specific but that temperature effects only partly explained observed changes in the distribution and/or productivity of populations in the Northwest Pacific and Northeast Atlantic; changes in temperature may be necessary but not sufficient to induce population-level shifts. Prey availability during the late larval and early juvenile period was a common, density-dependent mechanism linked to fluctuations in populations but recruitment mechanisms were system-specific suggesting that generalizations of climate drivers across systems should be avoided. We identified gaps in knowledge regarding basic elements of the growth physiology of each life stage that will require additional field and laboratory study. Avenues of research are recommended that will aid the development of models that provide more robust, physiological-based projections of the population dynamics of these and other small pelagic fish. In our

  16. Great Lakes prey fish populations: A cross-basin overview of status and trends in 2008

    Science.gov (United States)

    Gorman, Owen T.; Bunnell, David B.

    2009-01-01

    Assessments of prey fishes in the Great Lakes have been conducted annually since the 1970s by the Great Lakes Science Center, sometimes assisted by partner agencies. Prey fish assessments differ among lakes in the proportion of a lake covered, seasonal timing, bottom trawl gear used, sampling design, and the manner in which the trawl is towed (across or along bottom contours). Because each assessment is unique in one or more important aspects, a direct comparison of prey fish catches among lakes is problematic. All of the assessments, however, produce indices of abundance or biomass that can be standardized to facilitate comparisons of trends among lakes and to illustrate present status of the populations. We present indices of abundance for important prey fishes in the Great Lakes standardized to the highest value for a time series within each lake: cisco (Coregonus artedi), bloater (C. hoyi), rainbow smelt (Osmerus mordax), and alewife (Alosa pseudoharengus). We also provide indices for round goby (Neogobius melanostomus), an invasive fish presently spreading throughout the basin. Our intent is to provide a short, informal report emphasizing data presentation rather than synthesis; for this reason we intentionally avoid use of tables and cited references.For each lake, standardized relative indices for annual biomass and density estimates of important prey fishes were calculated as the fraction relative to the largest value observed in the times series. To determine whether basin-wide trends were apparent for each species, we first ranked standardized index values within each lake. When comparing ranked index values from three or more lakes, we calculated the Kendall coefficient of concordance (W), which can range from 0 (complete discordance or disagreement among trends) to 1 (complete concordance or agreement among trends). The P-value for W provides the probability of agreement across the lakes. When comparing ranked index values from two lakes, we calculated

  17. Development of fish populations in seismostrsss conditions of the south of Russia

    Directory of Open Access Journals (Sweden)

    P. V. Lyushvin

    2009-01-01

    Full Text Available The last decades communications between reproduction of many food fishes and traditionally considered factors are lost, is unpredictable time recessions food are observed. The purpose of thepresent work to show, that in the seismo-seas of the south of Russia where there is a unloading litosheric fluids, seismo factors often are defining in reproduction fishes. Earthquakes lead to shortterm unloadings on breaks of an earth's crust through the made active volcanos and griffins of hundreds tons litosheric waters and km³ gases (metane, hydrogen, hydrogen sulphide, radon, etc.. Presence of some of these fluids even in midget concentration (less than 0.1-1 ml/½ causes destruction young fishes, infringement of reproductive functions due to what the food base crabs grows, and after their reproduction and extraction. Landslide reductions of fish populations in current decade it is caused by passage of a maximum of century cyclicity of earthquakes.

  18. Expansion of Dreissena into offshore waters of Lake Michigan and potential impacts on fish populations

    Science.gov (United States)

    Bunnell, D.B.; Madenjian, C.P.; Holuszko, J.D.; Adams, J.V.; French, J. R. P.

    2009-01-01

    Lake Michigan was invaded by zebra mussels (Dreissena polymorpha) in the late 1980s and then followed by quagga mussels (D. bugensis) around 1997. Through 2000, both species (herein Dreissena) were largely restricted to depths less than 50??m. Herein, we provide results of an annual lake-wide bottom trawl survey in Lake Michigan that reveal the relative biomass and depth distribution of Dreissena between 1999 and 2007 (although biomass estimates from a bottom trawl are biased low). Lake-wide mean biomass density (g/m2) and mean depth of collection revealed no trend between 1999 and 2003 (mean = 0.7??g/m2 and 37??m, respectively). Between 2004 and 2007, however, mean lake-wide biomass density increased from 0.8??g/m2 to 7.0??g/m2, because of increased density at depths between 30 and 110??m, and mean depth of collection increased from 42 to 77??m. This pattern was confirmed by a generalized additive model. Coincident with the Dreissena expansion that occurred beginning in 2004, fish biomass density (generally planktivores) declined 71% between 2003 and 2007. Current understanding of fish population dynamics, however, indicates that Dreissena expansion is not the primary explanation for the decline of fish, and we provide a species-specific account for more likely underlying factors. Nonetheless, future sampling and research may reveal a better understanding of the potential negative interactions between Dreissena and fish in Lake Michigan and elsewhere.

  19. Status and trends of prey fish populations in Lake Michigan, 2013

    Science.gov (United States)

    Madenjian, Charles P.; Bunnell, David B.; Desorcie, Timothy J.; Kostich, Melissa Jean; Armenio, Patricia M.; Adams, Jean V.

    2015-01-01

    The U.S. Geological Survey Great Lakes Science Center has conducted lake-wide surveys of the fish community in Lake Michigan each fall since 1973 using standard 12-m bottom trawls towed along contour at depths of 9 to 110 m at each of seven index transects. The resulting data on relative abundance, size and age structure, and condition of individual fishes are used to estimate various population parameters that are in turn used by state and tribal agencies in managing Lake Michigan fish stocks. All seven established index transects of the survey were completed in 2013. The survey provides relative abundance and biomass estimates between the 5-m and 114-m depth contours of the lake (herein, lake-wide) for prey fish populations, as well as burbot, yellow perch, and the introduced dreissenid mussels. Lake-wide biomass of alewives in 2013 was estimated at 29 kilotonnes (kt, 1 kt = 1000 metric tonnes), which was more than three times the 2012 estimate. However, the unusually high standard error associated with the 2013 estimate indicated no significant increase in lake-wide biomass between 2012 and 2013. Moreover, the age distribution of alewives remained truncated with no alewife exceeding an age of 5. The population of age-1 and older alewives was dominated (i.e., 88%) by the 2010 and 2012 year-classes. Record low biomass was observed for deepwater sculpin (1.3 kt) and ninespine stickleback (0.004 kt) in 2013, while bloater (1.6 kt) and rainbow smelt (0.2 kt) biomasses remained at low levels. Slimy sculpin lake-wide biomass was 0.32 kt in 2013, marking the fourth consecutive year of a decline. The 2013 biomass of round goby was estimated at 10.9 kt, which represented the peak estimate to date. Burbot lake-wide biomass (0.4 kt in 2013) has remained below 3 kt since 2001. Numeric density of age-0 yellow perch (i.e., fish per ha, which is indicative of a relatively poor year-class. Lake-wide biomass estimate of dreissenid mussels in 2013 was 23.2 kt. Overall, the total

  20. Fish and fire: Post-wildfire sediment dynamics and implications for the viability of trout populations

    Science.gov (United States)

    Murphy, B. P.; Czuba, J. A.; Belmont, P.; Budy, P.; Finch, C.

    2017-12-01

    Episodic events in steep landscapes, such as wildfire and mass wasting, contribute large pulses of sediment to rivers and can significantly alter the quality and connectivity of fish habitat. Understanding where these sediment inputs occur, how they are transported and processed through the watershed, and their geomorphic effect on the river network is critical to predicting the impact on ecological aquatic communities. The Tushar Mountains of southern Utah experienced a severe wildfire in 2010, resulting in numerous debris flows and the extirpation of trout populations. Following many years of habitat and ecological monitoring in the field, we have developed a modeling framework that links post-wildfire debris flows, fluvial sediment routing, and population ecology in order to evaluate the impact and response of trout to wildfire. First, using the Tushar topographic and wildfire parameters, as well as stochastic precipitation generation, we predict the post-wildfire debris flow probabilities and volumes of mainstem tributaries using the Cannon et al. [2010] model. This produces episodic hillslope sediment inputs, which are delivered to a fluvial sediment, river-network routing model (modified from Czuba et al. [2017]). In this updated model, sediment transport dynamics are driven by time-varying discharge associated with the stochastic precipitation generation, include multiple grain sizes (including gravel), use mixed-size transport equations (Wilcock & Crowe [2003]), and incorporate channel slope adjustments with aggradation and degradation. Finally, with the spatially explicit adjustments in channel bed elevation and grain size, we utilize a new population viability analysis (PVA) model to predict the impact and recovery of fish populations in response to these changes in habitat. Our model provides a generalizable framework for linking physical and ecological models and for evaluating the extirpation risk of isolated fish populations throughout the

  1. The scaling of population persistence with carrying capacity does not asymptote in populations of a fish experiencing extreme climate variability.

    Science.gov (United States)

    White, Richard S A; Wintle, Brendan A; McHugh, Peter A; Booker, Douglas J; McIntosh, Angus R

    2017-06-14

    Despite growing concerns regarding increasing frequency of extreme climate events and declining population sizes, the influence of environmental stochasticity on the relationship between population carrying capacity and time-to-extinction has received little empirical attention. While time-to-extinction increases exponentially with carrying capacity in constant environments, theoretical models suggest increasing environmental stochasticity causes asymptotic scaling, thus making minimum viable carrying capacity vastly uncertain in variable environments. Using empirical estimates of environmental stochasticity in fish metapopulations, we showed that increasing environmental stochasticity resulting from extreme droughts was insufficient to create asymptotic scaling of time-to-extinction with carrying capacity in local populations as predicted by theory. Local time-to-extinction increased with carrying capacity due to declining sensitivity to demographic stochasticity, and the slope of this relationship declined significantly as environmental stochasticity increased. However, recent 1 in 25 yr extreme droughts were insufficient to extirpate populations with large carrying capacity. Consequently, large populations may be more resilient to environmental stochasticity than previously thought. The lack of carrying capacity-related asymptotes in persistence under extreme climate variability reveals how small populations affected by habitat loss or overharvesting, may be disproportionately threatened by increases in extreme climate events with global warming. © 2017 The Author(s).

  2. Global multi-decadal ocean climate and small-pelagic fish population

    International Nuclear Information System (INIS)

    Tourre, Yves M; Lluch-Cota, Salvador E; White, Warren B

    2007-01-01

    Ocean climate, environmental and biological conditions vary on several spatio-temporal scales. Besides climate change associated with anthropogenic activity, there is growing evidence of a natural global multi-decadal climate signal in the ocean-atmosphere-biosphere climate system. The spatio-temporal evolution of this signal is thus analyzed during the 20th century and compared to the variability of small-pelagic fish landings. It is argued that the low-frequency global ocean environment and plankton ecosystems must be modified such that small-pelagic populations vary accordingly. A small-pelagic global index or fishing 'regime indicator series' (RIS) (i.e. a small-pelagic abundance indicator) is used. RIS is derived from fish landings data in the four main fishing areas in the Pacific and Atlantic oceans. Global RIS changes phase (from positive to negative values) when SST multi-decadal anomalies are out-of-phase between the eastern Pacific and southern Atlantic. RIS also displays maxima during the mid-30s to early-40s and the late-70s to early-80s when the multi-decadal signal was approximately changing phases (Tourre and White 2006 Geophys. Res. Lett. 33 L06716). It is recognized that other factors may modulate fish stocks, including anthropogenic predation. Nevertheless it is proposed that variable climate and environment, and the low-frequency 'global synchrony' of small-pelagic landings (Schwartzlose et al 1999 S. Afr. J. Mar. Sci. 21 289-347), could be associated with the multi-decadal changes in global ocean climate conditions

  3. Monitoring of East Channel dredge areas benthic fish population and its implications

    International Nuclear Information System (INIS)

    Drabble, Ray

    2012-01-01

    Regional annual sampling of commercial fish stocks formed a high priority for monitoring studies attendant with the granting of aggregate dredging licenses in the Eastern Channel Region (ECR) which had previously not been dredged. An assessment of 4 m beam trawl sampling between 2005 and 2008 following the granting of licences in 2006 is provided. The majority of fish species have shown marked reductions in abundance since commencement of dredging. Draghead entrainment has been identified as a possible contributory cause based upon the known vulnerability of selected species (). Other environmental factors considered offer no explanation for the changes in abundance. Comparative analyses with ICES data for plaice and sole over the study period demonstrate that changes in the ECR do not result from seasonal flux in the wider populations. An alternative impact model and potential mitigation measures are suggested.

  4. Distribution and abundance of fish populations in the Middle Wabash River

    International Nuclear Information System (INIS)

    Teppen, T.C.; Gammon, J.R.

    1976-01-01

    A field investigation was made of the distribution and abundance of fish within a 161-km portion of the Wabash River to determine effects of heated effluents as well as changes in water quality on ichthyofaunal communities within the river. Twenty-six sampling stations were electrofished, sequentially, four times in 1974 with extended sampling efforts made in the vicinity of two power-generating stations studied since 1967 and 1968. During August an overall rise in river temperature of 4 0 C was observed from upstream to downstream, with several chemical factors also showing slight increases. Although the majority of species populations were influenced either negatively or positively by the gradient of river conditions available to them, the only statistically significant parameters found in the analysis of community structure involved a lower diversity by weight below Terre Haute and a greater abundance of fish above the Cayuga generating station. Decreases occurred downstream in populations of redhorse (Moxostoma sp.), sauger (Stizostedion canadense), longear sunfish (Lepomis megalotis), and gizzard shad (Dorosoma cepedianum), with increases downstream observed in flathead catfish (Pylodictis olivaris), shortnose gar (Lepisosteus platostomus), longnose gar (E. osseus), and bowfin (Amia calva) populations. Carp (Cyprinus carpio) were present in large numbers throughout the study area with a tremendous population increase evident in recent years. Although species associations were variable among the segments, overall community parameters remained relatively unaffected

  5. Comparing climate change and species invasions as drivers of coldwater fish population extirpations.

    Directory of Open Access Journals (Sweden)

    Sapna Sharma

    Full Text Available Species are influenced by multiple environmental stressors acting simultaneously. Our objective was to compare the expected effects of climate change and invasion of non-indigenous rainbow smelt (Osmerus mordax on cisco (Coregonus artedii population extirpations at a regional level. We assembled a database of over 13,000 lakes in Wisconsin, USA, summarising fish occurrence, lake morphology, water chemistry, and climate. We used A1, A2, and B1 scenarios from the Intergovernmental Panel on Climate Change (IPCC of future temperature conditions for 15 general circulation models in 2046-2065 and 2081-2100 totalling 78 projections. Logistic regression indicated that cisco tended to occur in cooler, larger, and deeper lakes. Depending upon the amount of warming, 25-70% of cisco populations are predicted to be extirpated by 2100. In addition, cisco are influenced by the invasion of rainbow smelt, which prey on young cisco. Projecting current estimates of rainbow smelt spread and impact into the future will result in the extirpation of about 1% of cisco populations by 2100 in Wisconsin. Overall, the effect of climate change is expected to overshadow that of species invasion as a driver of coldwater fish population extirpations. Our results highlight the potentially dominant role of climate change as a driver of biotic change.

  6. Low prevalence of reactive PPD prior to infliximab use: comparative study on a population sample of Hospital Geral de Fortaleza.

    Science.gov (United States)

    Callado, Maria Roseli Monteiro; Lima, José Rubens Costa; Nobre, Christiane Aguiar; Vieira, Walber Pinto

    2011-01-01

    To identify tuberculosis infection in rheumatic patients on infliximab by use of PPD testing prior to immunobiologic therapy. This study comprised 157 patients undergoing infliximab treatment and 734 other patients undergoing laboratory screening for tuberculosis infection originating from several services. The Mantoux technique was used for PPD testing, and an induration of at least 5 mm was considered reactive status. In the infliximab group, 13% of the patients reacted to PPD, while, in the other group, 27% of the patients reacted to PPD (χ² = 13; P = 0.0003). These patients were divided into categories: adults with chronic diseases, PPD reactivity of 22%; and other controls, PPD reactivity of 31%. This shows the heterogeneous response of that population (χ² = 7; P PPD reactivity in the RA subgroup (4%) was also lower as compared with that of the chronic patients group (22%) (OR = 0.16; CI: 0.05-0.49; χ² = 14; P = 0.0002), even when reclassified into four subgroups: rheumatology (OR = 0.19; CI: 0.04-0.72), kidney transplantation (OR = 0.16; CI: 0.05-0.51), infectology (OR = 0.21; CI: 0.05-0.75), and other conditions (OR = 0.13; CI: 0.04-0.44). The low prevalence of PPD reaction in this Brazilian population, mainly in chronic patients, with the worst performance among RA patients, showed that the test has limited value for diagnosis of tuberculosis infection in candidates to infliximab therapy.

  7. Population structure, fluctuating asymmetry and genetic variability in an endemic and highly isolated Astyanax fish population (Characidae

    Directory of Open Access Journals (Sweden)

    Maria Claudia Gross

    2004-01-01

    Full Text Available Morphological and chromosomal markers were used to infer the structure and genetic variability of a population of fish of the genus Astyanax, geographically isolated at sinkhole 2 of Vila Velha State Park, Paraná, Brazil. Two morphotypes types were observed, the standard phenotype I and phenotype II which showed an anatomical alteration probably due to an inbreeding process. Fluctuating asymmetry (FA analysis of different characters showed low levels of morphological variation among the population from sinkhole 2 and in another population from the Tibagi river (Paraná, Brazil. The Astyanax karyotype was characterized in terms of chromosomal morphology, constitutive heterochromatin and nucleolar organizer regions. Males and females presented similar karyotypes (2n=48, 6M+18SM+14ST+10A with no evidence of a sex chromosome system. One female from sinkhole 2 was a natural triploid with 2n=3x=72 chromosomes (9M+27SM+21ST+15A. The data are discussed regarding the maintenance of population structure and their evolutionary importance, our data suggesting that Astyanax from the Vila Velha State Park sinkhole 2 is a recently isolated population.

  8. Successional change in the Lake Superior fish community: population trends in ciscoes, rainbow smelt, and lake trout, 1958-2008

    Science.gov (United States)

    Gorman, Owen T.

    2012-01-01

    The Lake Superior fish community underwent massive changes in the second half of the 20th century. Those changes are largely reflected in changes in abundance of the adults of principal prey species, the ciscoes (Coregonus spp.), the invasive rainbow smelt (Osmerus mordax), and the principal predator, lake trout (Salvelinus namaycush). To better understand changes in species abundances, a comprehensive series of gillnet and bottom trawl data collected from 1958 to 2008 were examined. In the late 1950s/early 1960s, smelt abundance was at its maximum, wild lake trout was at its minimum, and an abundance of hatchery lake trout was increasing rapidly. The bloater (Coregonus hoyi) was the prevalent cisco in the lake; abundance was more than 300% greater than the next most abundant cisco, shortjaw cisco (C. zenithicus), followed by kiyi (C. kiyi) and lake cisco (C. artedi). By the mid-1960s, abundance of hatchery lake trout was nearing maximum, smelt abundance was beginning to decline, and abundances of all ciscoes declined, but especially that of shortjaw cisco and kiyi. By the late 1970s, recovery of wild lake trout stocks was well underway and abundances of hatchery lake trout and smelt were declining and the ciscoes were reaching their nadir. During 1980–1990, the fish community underwent a dramatic shift in organization and structure. The rapid increase in abundance of wild lake trout, concurrent with a rapid decline in hatchery lake trout, signaled the impending recovery. Rainbow smelt abundance dropped precipitously and within four years, lake cisco and bloater populations rebounded on the heels of a series of strong recruitment events. Kiyi populations showed signs of recovery by 1989, and shortjaw by 2000, though well below historic maximum abundances. High abundance of adult smelt prior to 1980 appears to be the only factor linked to recruitment failure in the ciscoes. Life history traits of the cisco species were examined to better understand their different

  9. DISPLACE: a dynamic, individual-based model for spatial fishing planning and effort displacement: Integrating underlying fish population models

    DEFF Research Database (Denmark)

    Bastardie, Francois; Nielsen, J. Rasmus; Miethe, Tanja

    or to the alteration of individual fishing patterns. We demonstrate that integrating the spatial activity of vessels and local fish stock abundance dynamics allow for interactions and more realistic predictions of fishermen behaviour, revenues and stock abundance......We previously developed a spatially explicit, individual-based model (IBM) evaluating the bio-economic efficiency of fishing vessel movements between regions according to the catching and targeting of different species based on the most recent high resolution spatial fishery data. The main purpose...... was to test the effects of alternative fishing effort allocation scenarios related to fuel consumption, energy efficiency (value per litre of fuel), sustainable fish stock harvesting, and profitability of the fisheries. The assumption here was constant underlying resource availability. Now, an advanced...

  10. Specific IgE to fish extracts does not predict allergy to specific species within an adult fish allergic population.

    Science.gov (United States)

    Schulkes, Karlijn Jg; Klemans, Rob Jb; Knigge, Lidy; de Bruin-Weller, Marjolein; Bruijnzeel-Koomen, Carla Afm; Marknell deWitt, Asa; Lidholm, Jonas; Knulst, André C

    2014-01-01

    Fish is an important cause of food allergy. Studies on fish allergy are scarce and in most cases limited to serological evaluation. Our objective was to study patterns of self-reported allergy and tolerance to different commonly consumed fish species and its correlation to IgE sensitization to the same species. Thirty-eight adult fish allergic patients completed a questionnaire regarding atopy, age of onset and symptoms to 13 commonly consumed fish species in the Netherlands (pangasius, cod, herring, eel, hake, pollock, mackerel, tilapia, salmon, sardine, tuna, plaice and swordfish). Specific IgE to these fish extracts were analyzed by ImmunoCAP. Median age of onset of fish allergy was 8.5 years. Severe reactions were reported by the majority of patients (n = 20 (53%) respiratory and of these 20 patients, 6 also had cardiovascular symptoms). After diagnosis, 66% of the patients had eliminated all fish from their diet. Allergy to all species ever tried was reported by 59%. In relation to species ever tried, cod (84%) and herring (79%) were the most frequently reported culprit species while hake (57%) and swordfish (55%) were the least frequent. A positive sIgE (value ≥ 0.35 kUA/L) to the culprit species ranged between 50% (swordfish) and 100% (hake). In tolerant patients, a negative sIgE (value allergy or tolerance was 82% and 25%, respectively. Sensitization to cod parvalbumin (Gad c 1) was present in 77% of all patients. Serological cross-reactivity between fish species is frequent, but in a significant proportion of patients, clinical relevance appears to be limited to only certain species. A well-taken history or food challenge is required for discrimination between allergy to the different fish species.

  11. Omics and Environmental Science Genomic Approaches With Natural Fish Populations From Polluted Environments

    Science.gov (United States)

    Bozinovic, Goran; Oleksiak, Marjorie F.

    2010-01-01

    Transcriptomics and population genomics are two complementary genomic approaches that can be used to gain insight into pollutant effects in natural populations. Transcriptomics identify altered gene expression pathways while population genomics approaches more directly target the causative genomic polymorphisms. Neither approach is restricted to a pre-determined set of genes or loci. Instead, both approaches allow a broad overview of genomic processes. Transcriptomics and population genomic approaches have been used to explore genomic responses in populations of fish from polluted environments and have identified sets of candidate genes and loci that appear biologically important in response to pollution. Often differences in gene expression or loci between polluted and reference populations are not conserved among polluted populations suggesting a biological complexity that we do not yet fully understand. As genomic approaches become less expensive with the advent of new sequencing and genotyping technologies, they will be more widely used in complimentary studies. However, while these genomic approaches are immensely powerful for identifying candidate gene and loci, the challenge of determining biological mechanisms that link genotypes and phenotypes remains. PMID:21072843

  12. Demography and genome divergence of lake and stream populations of an East African cichlid fish.

    Science.gov (United States)

    Egger, Bernd; Roesti, Marius; Böhne, Astrid; Roth, Olivia; Salzburger, Walter

    2017-10-01

    Disentangling the processes and mechanisms underlying adaptive diversification is facilitated by the comparative study of replicate population pairs that have diverged along a similar environmental gradient. Such a setting is realized in a cichlid fish from southern Lake Tanganyika, Astatotilapia burtoni, which occurs within the lake proper as well as in various affluent rivers. Previously, we demonstrated that independent lake and stream populations show similar adaptations to the two habitat regimes. However, little is known about the evolutionary and demographic history of the A. burtoni populations in question and the patterns of genome divergence among them. Here, we apply restriction site-associated DNA sequencing (RADseq) to examine the evolutionary history, the population structure and genomic differentiation of lake and stream populations in A. burtoni. A phylogenetic reconstruction based on genome-wide molecular data largely resolved the evolutionary relationships among populations, allowing us to re-evaluate the independence of replicate lake-stream population clusters. Further, we detected a strong pattern of isolation by distance, with baseline genomic divergence increasing with geographic distance and decreasing with the level of gene flow between lake and stream populations. Genome divergence patterns were heterogeneous and inconsistent among lake-stream population clusters, which is explained by differences in divergence times, levels of gene flow and local selection regimes. In line with the latter, we only detected consistent outlier loci when the most divergent lake-stream population pair was excluded. Several of the thus identified candidate genes have inferred functions in immune and neuronal systems and show differences in gene expression between lake and stream populations. © 2017 John Wiley & Sons Ltd.

  13. Higher freshwater fish and sea fish intake is inversely associated with colorectal cancer risk among Chinese population: a case-control study.

    Science.gov (United States)

    Xu, Ming; Fang, Yu-Jing; Chen, Yu-Ming; Lu, Min-Shan; Pan, Zhi-Zhong; Yan, Bo; Zhong, Xiao; Zhang, Cai-Xia

    2015-08-12

    The association between specific fish intake and colorectal cancer risk remains controversial. This study aimed to examine the association between specific fish intake and colorectal cancer risk in Chinese population in a large case control study. During July 2010 to November 2014, 1189 eligible colorectal cancer cases and 1189 frequency-matched controls (age and sex) completed in-person interviews. A validated food frequency questionnaire was used to estimate dietary intake. Multivariate logistical regression models were used to estimate the odds ratio (OR) and 95% confidence interval (95% CI) after adjusting for various confounders. A strong inverse association was found between freshwater fish intake and colorectal cancer risk. Compared with the lowest quartile, the highest quartile intake showed a risk reduction of 53% (OR 0.47, 95% CI = 0.36-0.60, Ptrend colorectal cancer risk. These results indicate that higher consumption of freshwater fish, sea fish and fresh fish is associated with a lower risk of colorectal caner.

  14. Population changes in a biofilm reactor for phosphorus removal as evidenced by the use of FISH

    DEFF Research Database (Denmark)

    Falkentoft, C.M.; Müller, E.; Arnz, P.

    2002-01-01

    as in the first run was seen after one month, although the phase lengths had not been varied. Hence, the decrease after 1 month in the first and second run should be seen as a start-up phenomenon. FISH could detect a noticeable shift in the microbial population mainly within the first 2 weeks ofoperation. Almost...... hybridised to the dominant bacterial groups in the reactors investigated. No noticeable changes were detected in the aerobic bench-scale reactor during this period, indicating that the observed changes in the lab-scale reactor were caused by the changed environment. r 2002 Elsevier Science Ltd. All rights...

  15. Does mobility explain variation in colonisation and population recovery among stream fishes?

    Science.gov (United States)

    Angermeier, Paul L.; Albanese, Brett; Peterson, James T.

    2009-01-01

    1. Colonisation and population recovery are crucial to species persistence in environmentally variable ecosystems, but are poorly understood processes. After documenting movement rates for several species of stream fish, we predicted that this variable would influence colonisation rates more strongly than local abundance, per cent occupancy, body size and taxonomic family. We also predicted that populations of species with higher movement rates would recover more rapidly than species with lower movement rates and that assemblage structure would change accordingly. 2. To test these predictions, we removed fishes from a headwater and a mainstem creek in southwest Virginia and monitored colonisation over a 2-year period. Using an information–theoretic approach, we evaluated the relative plausibility of 15 alternative models containing different combinations of our predictor variables. Our best-supported model contained movement rate and abundance and was 41 times more likely to account for observed patterns in colonisation rates than the next-best model. Movement rate and abundance were both positively related to colonisation rates and explained 88% of the variation in colonisation rates among species. 3. Population recovery, measured as the per cent of initial abundance restored, was also positively associated with movement rate. One species recovered within 3 months, most recovered within 2 years, but two species still had not recovered after 2 years. Despite high variation in recovery, the removal had only a slight impact on assemblage structure because species that were abundant in pre-removal samples were also abundant in post-removal samples. 4. The significance of interspecific variation in colonisation and recovery rates has been underappreciated because of the widely documented recovery of stream fish assemblages following fish kills and small-scale experimental defaunations. Our results indicate that recovery of the overall assemblage does not imply

  16. Visual Basic, Excel-based fish population modeling tool - The pallid sturgeon example

    Science.gov (United States)

    Moran, Edward H.; Wildhaber, Mark L.; Green, Nicholas S.; Albers, Janice L.

    2016-02-10

    The model presented in this report is a spreadsheet-based model using Visual Basic for Applications within Microsoft Excel (http://dx.doi.org/10.5066/F7057D0Z) prepared in cooperation with the U.S. Army Corps of Engineers and U.S. Fish and Wildlife Service. It uses the same model structure and, initially, parameters as used by Wildhaber and others (2015) for pallid sturgeon. The difference between the model structure used for this report and that used by Wildhaber and others (2015) is that variance is not partitioned. For the model of this report, all variance is applied at the iteration and time-step levels of the model. Wildhaber and others (2015) partition variance into parameter variance (uncertainty about the value of a parameter itself) applied at the iteration level and temporal variance (uncertainty caused by random environmental fluctuations with time) applied at the time-step level. They included implicit individual variance (uncertainty caused by differences between individuals) within the time-step level.The interface developed for the model of this report is designed to allow the user the flexibility to change population model structure and parameter values and uncertainty separately for every component of the model. This flexibility makes the modeling tool potentially applicable to any fish species; however, the flexibility inherent in this modeling tool makes it possible for the user to obtain spurious outputs. The value and reliability of the model outputs are only as good as the model inputs. Using this modeling tool with improper or inaccurate parameter values, or for species for which the structure of the model is inappropriate, could lead to untenable management decisions. By facilitating fish population modeling, this modeling tool allows the user to evaluate a range of management options and implications. The goal of this modeling tool is to be a user-friendly modeling tool for developing fish population models useful to natural resource

  17. Coalbed gas environmental resource information project : fish population and habitat study review : Similkameen and Tulameen coalfields : final report

    Energy Technology Data Exchange (ETDEWEB)

    NONE

    2006-03-15

    This paper provided an overview of fish and fish habitats in the Similkameen and Tulameen coalfields area. The report consisted of a literature review as well as the examination of a regional-specific database. Discussions and interviews were conducted with First Nations, members of the oil and gas industry, and various governmental and non-governmental organizations. The report identified fish species in the region, and provided details of fish distribution and habitat, and obstructions and constraints to fish populations. Information on sensitive species was also provided. Watershed and hydrological overviews were provided, as well as summary tables for all relevant data. Online mapping and resource databases were used to prepare a profile of fish and fish habitat studies. Sensitive species information was obtained from online governmental mapping resources. The acquired data were then used to produce resource lists and habitat tables for streams and rivers residing within or transiting through the area. Four fish species were identified as species at risk, and an additional fish species was considered to be endangered. It was concluded that a centralized and mandatory reporting system must be developed to ensure that all documents are deposited within a single central library. Approximately 80 per cent of the information gathered for the report did not exist in the Environmental Resources Information Project (ERIP) database. 16 refs., 11 tabs., 1 fig.

  18. Cost-constrained optimal sampling for system identification in pharmacokinetics applications with population priors and nuisance parameters.

    Science.gov (United States)

    Sorzano, Carlos Oscars S; Pérez-De-La-Cruz Moreno, Maria Angeles; Burguet-Castell, Jordi; Montejo, Consuelo; Ros, Antonio Aguilar

    2015-06-01

    Pharmacokinetics (PK) applications can be seen as a special case of nonlinear, causal systems with memory. There are cases in which prior knowledge exists about the distribution of the system parameters in a population. However, for a specific patient in a clinical setting, we need to determine her system parameters so that the therapy can be personalized. This system identification is performed many times by measuring drug concentrations in plasma. The objective of this work is to provide an irregular sampling strategy that minimizes the uncertainty about the system parameters with a fixed amount of samples (cost constrained). We use Monte Carlo simulations to estimate the average Fisher's information matrix associated to the PK problem, and then estimate the sampling points that minimize the maximum uncertainty associated to system parameters (a minimax criterion). The minimization is performed employing a genetic algorithm. We show that such a sampling scheme can be designed in a way that is adapted to a particular patient and that it can accommodate any dosing regimen as well as it allows flexible therapeutic strategies. © 2015 Wiley Periodicals, Inc. and the American Pharmacists Association.

  19. Impact of entrainment and impingement on fish populations in the Hudson River estuary. Volume I. Entrainment-impact estimates for six fish populations inhabiting the Hudson River estuary

    International Nuclear Information System (INIS)

    Boreman, J.; Barnthouse, L.W.; Vaughn, D.S.; Goodyear, C.P.; Christensen, S.W.; Kumar, K.D.; Kirk, B.L.; Van Winkle, W.

    1982-01-01

    This volume is concerned with the estimation of the direct (or annual) entrainment impact of power plants on populations of striped bass, white perch, Alosa spp. (blueback herring and alewife), American shad, Atlantic tomcod, and bay anchovy in the Hudson River estuary. Entrainment impact results from the killing of fish eggs, larvae, and young juveniles that are contained in the cooling water cycled through a power plant. An Empirical Transport Model (ETM) is presented as the means of estimating a conditional entrainment mortality rate (defined as the fraction of a year class which would be killed due to entrainment in the absence of any other source of mortality). Most of this volume is concerned with the estimation of several parameters required by the ETM: physical input parameters (e.g., power-plant withdrawal flow rates); the longitudinal distribution of ichthyoplankton in time and space; the duration of susceptibility of the vulnerable organisms; the W-factors, which express the ratios of densities of organisms in power plant intakes to densities of organisms in the river; and the entrainment mortality factors (f-factors), which express the probability that an organism will be killed if it is entrained. Once these values are obtained, the ETM is used to estimate entrainment impact for both historical and projected conditions

  20. Impact of climate change on fish population dynamics in the baltic sea: a dynamical downscaling investigation

    DEFF Research Database (Denmark)

    Mackenzie, Brian R; Meier, H E Markus; Lindegren, Martin

    2012-01-01

    Understanding how climate change, exploitation and eutrophication will affect populations and ecosystems of the Baltic Sea can be facilitated with models which realistically combine these forcings into common frameworks. Here, we evaluate sensitivity of fish recruitment and population dynamics...... and the temperature have influenced recruitment for at least 50 years. The three Baltic Sea models estimate relatively similar developments (increases) in biomass and fishery yield during twenty-first century climate change (ca. 28 % range among models). However, this uncertainty is exceeded by the one associated...... to past and future environmental forcings provided by three ocean-biogeochemical models of the Baltic Sea. Modeled temperature explained nearly as much variability in reproductive success of sprat (Sprattus sprattus; Clupeidae) as measured temperatures during 1973-2005, and both the spawner biomass...

  1. Embryonic IGF2 expression is not associated with offspring size among populations of a placental fish.

    Directory of Open Access Journals (Sweden)

    Matthew Schrader

    Full Text Available In organisms that provision young between fertilization and birth, mothers and their developing embryos are expected to be in conflict over embryonic growth. In mammalian embryos, the expression of Insulin-like growth factor II (IGF2 plays a key role in maternal-fetal interactions and is thought to be a focus of maternal-fetal conflict. Recent studies have suggested that IGF2 is also a focus of maternal-fetal conflict in placental fish in the family Poeciliidae. However, whether the expression of IGF2 influences offspring size, the trait over which mothers and embryos are likely to be in conflict, has not been assessed in a poeciliid. We tested whether embryonic IGF2 expression varied among four populations of a placental poeciliid that display large and consistent differences in offspring size at birth. We found that IGF2 expression varied significantly among embryonic stages with expression being 50% higher in early stage embryos than late stage embryos. There were no significant differences among populations in IGF2 expression; small differences in expression between population pairs with different offspring sizes were comparable in magnitude to those between population pairs with the same offspring sizes. Our results indicate that variation in IGF2 transcript abundance does not contribute to differences in offspring size among H. formosa populations.

  2. Density regulation in Northeast Atlantic fish populations: Density dependence is stronger in recruitment than in somatic growth.

    Science.gov (United States)

    Zimmermann, Fabian; Ricard, Daniel; Heino, Mikko

    2018-05-01

    Population regulation is a central concept in ecology, yet in many cases its presence and the underlying mechanisms are difficult to demonstrate. The current paradigm maintains that marine fish populations are predominantly regulated by density-dependent recruitment. While it is known that density-dependent somatic growth can be present too, its general importance remains unknown and most practical applications neglect it. This study aimed to close this gap by for the first time quantifying and comparing density dependence in growth and recruitment over a large set of fish populations. We fitted density-dependent models to time-series data on population size, recruitment and age-specific weight from commercially exploited fish populations in the Northeast Atlantic Ocean and the Baltic Sea. Data were standardized to enable a direct comparison within and among populations, and estimated parameters were used to quantify the impact of density regulation on population biomass. Statistically significant density dependence in recruitment was detected in a large proportion of populations (70%), whereas for density dependence in somatic growth the prevalence of density dependence depended heavily on the method (26% and 69%). Despite age-dependent variability, the density dependence in recruitment was consistently stronger among age groups and between alternative approaches that use weight-at-age or weight increments to assess growth. Estimates of density-dependent reduction in biomass underlined these results: 97% of populations with statistically significant parameters for growth and recruitment showed a larger impact of density-dependent recruitment on population biomass. The results reaffirm the importance of density-dependent recruitment in marine fishes, yet they also show that density dependence in somatic growth is not uncommon. Furthermore, the results are important from an applied perspective because density dependence in somatic growth affects productivity and

  3. Lessons learned from practical approaches to reconcile mismatches between biological population structure and stock units of marine fish

    DEFF Research Database (Denmark)

    Kerr, Lisa A.; Hintzen, Niels T.; Cadrin, Steven X.

    2017-01-01

    for overexploitation of unique spawning components, which can lead to loss of productivity and reduced biodiversity along with destabilization of local and regional stock dynamics. Furthermore, ignoring complex population structure and stock connectivity can lead to misperception of the magnitude of fish productivity......, which can translate to suboptimal utilization of the resource. We describe approaches that are currently being applied to improve the assessment and management process for marine fish in situations where complex spatial structure has led to an observed mismatch between the scale of biological...... and resilience of fish species....

  4. Long-term changes in deep-water fish populations in the northeast Atlantic: a deeper reaching effect of fisheries?

    OpenAIRE

    Bailey, D.M.; Collins, M.A.; Gordon, J.D.M.; Zuur, A.F.; Priede, I.G.

    2009-01-01

    A severe scarcity of life history and population data for deep-water fishes is a major impediment to successful fisheries management. Long-term data for non-target species and those living deeper than the fishing grounds are particularly rare. We analysed a unique dataset of scientific trawls made from 1977 to 1989 and from 1997 to 2002, at depths from 800 to 4800 m. Over this time, overall fish abundance fell significantly at all depths from 800 to 2500 m, considerably deeper than the maximu...

  5. The impacts of mobile fishing gear on seafloor habitats in the Gulf of Maine (Northwest Atlantic): implications for conservation of fish populations

    Science.gov (United States)

    Auster, Peter J.; Malatesta, Richard J.; Langton, Richard W.; Watting, Les; Valentine, Page C.; Donaldson, Carol Lee S.; Langton, Elizabeth W.; Shepard, Andrew N.; Babb, War G.

    1997-01-01

    Fishing gear alters seafloor habitats, but the extent of these alterations, and their effects, have not been quantified extensively in the northwest Atlantic. Understanding the extent of these impacts, and their effects on populations of living marine resources, is needed to properly manage current and future levels of fishing effort and fishing power. For example, the entire U.S. side of the Gulf of Maine was impacted annually by mobile fishing gear between 1984 and 1990, based on calculations of area swept by trawl and dredge gear. Georges Bank was imparted three to nearly four times annually during the same period. Studies at three sites in the Gulf of Maine (off Swans Island, Jeffreys Bank, and Stellwagen Bank) showed that mobile fishing gear altered the physical structure (=complexity) of benthic habitats. Complexity was reduced by direct removal of biogenic (e.g., sponges, hydrozoans, bryozoans, amphipod tubes, holothurians, shell aggregates) and‐ sedimentary (e.g., sand waves, depressions) structures. Also, removal of organisms that create.structures (e.g., crabs, scallops) indirectly reduced complexity. Reductions in habitat complexity may lead to increased predation on juveniles of harvested species and ultimately recruitment to the harvestable stock. Because of a lack of reference sites, where use of mobile fishing is prohibited, no empirical studies have yet been conducted on a scale that could demonstrate population level effects of habitat‐management options. If marine fisheries management is to evolve toward an ecosystem or habitat management approach, experiments are required on the effects of habitat change, both anthropogenic and natural.

  6. Changing Levels of Predation on Benthos as a Result of Exploitation of Fish Populations

    NARCIS (Netherlands)

    Hansson, S.; Frid, C.L.J.; Ragnarsson, S.A.; Rijnsdorp, A.; Steingrimsson, S.A.

    1999-01-01

    In many coastal areas fishing constitutes the dominant anthropogenic impact on coastal ecosystems. That fishing has altered the abundance and size spectra of fish communities is beyond doubt. We use time series of the abundance, in the North Sea, of 8 demersal fish species and data on food

  7. Potential population and assemblage influences of non-native trout on native nongame fish in Nebraska headwater streams

    Science.gov (United States)

    Turek, Kelly C.; Pegg, Mark A.; Pope, Kevin L.; Schainost, Steve

    2014-01-01

    Non-native trout are currently stocked to support recreational fisheries in headwater streams throughout Nebraska. The influence of non-native trout introductions on native fish populations and their role in structuring fish assemblages in these systems is unknown. The objectives of this study were to determine (i) if the size structure or relative abundance of native fish differs in the presence and absence of non-native trout, (ii) if native fish-assemblage structure differs in the presence and absence of non-native trout and (iii) if native fish-assemblage structure differs across a gradient in abundances of non-native trout. Longnose dace Rhinichthys cataractae were larger in the presence of brown trout Salmo trutta and smaller in the presence of rainbow trout Oncorhynchus mykiss compared to sites without trout. There was also a greater proportion of larger white suckers Catostomus commersonii in the presence of brown trout. Creek chub Semotilus atromaculatus and fathead minnow Pimephales promelas size structures were similar in the presence and absence of trout. Relative abundances of longnose dace, white sucker, creek chub and fathead minnow were similar in the presence and absence of trout, but there was greater distinction in native fish-assemblage structure between sites with trout compared to sites without trout as trout abundances increased. These results suggest increased risk to native fish assemblages in sites with high abundances of trout. However, more research is needed to determine the role of non-native trout in structuring native fish assemblages in streams, and the mechanisms through which introduced trout may influence native fish populations.

  8. Projected risk of population declines for native fish species in the Upper Mississippi River

    Science.gov (United States)

    Crimmins, S.M.; Boma, P.; Thogmartin, W.E.

    2015-01-01

    Conservationists are in need of objective metrics for prioritizing the management of habitats. For individual species, the threat of extinction is often used to prioritize what species are in need of conservation action. Using long-term monitoring data, we applied a Bayesian diffusion approximation to estimate quasi-extinction risk for 54 native fish species within six commercial navigation reaches along a 1350-km gradient of the upper Mississippi River system. We found a strong negative linear relationship between quasi-extinction risk and distance upstream. For some species, quasi-extinction estimates ranged from nearly zero in some reaches to one in others, suggesting substantial variability in threats facing individual river reaches. We found no evidence that species traits affected quasi-extinction risk across the entire system. Our results indicate that fishes within the upper Mississippi River system face localized threats that vary across river impact gradients. This suggests that conservation actions should be focused on local habitat scales but should also consider the additive effects on downstream conditions. We also emphasize the need for identification of proximate mechanisms behind observed and predicted population declines, as conservation actions will require mitigation of such mechanisms. Published 2014. This article is a U.S. Government work and is in the public domain in the USA.

  9. Comparison of sampling methodologies and estimation of population parameters for a temporary fish ectoparasite

    Directory of Open Access Journals (Sweden)

    J.M. Artim

    2016-08-01

    Full Text Available Characterizing spatio-temporal variation in the density of organisms in a community is a crucial part of ecological study. However, doing so for small, motile, cryptic species presents multiple challenges, especially where multiple life history stages are involved. Gnathiid isopods are ecologically important marine ectoparasites, micropredators that live in substrate for most of their lives, emerging only once during each juvenile stage to feed on fish blood. Many gnathiid species are nocturnal and most have distinct substrate preferences. Studies of gnathiid use of habitat, exploitation of hosts, and population dynamics have used various trap designs to estimate rates of gnathiid emergence, study sensory ecology, and identify host susceptibility. In the studies reported here, we compare and contrast the performance of emergence, fish-baited and light trap designs, outline the key features of these traps, and determine some life cycle parameters derived from trap counts for the Eastern Caribbean coral-reef gnathiid, Gnathia marleyi. We also used counts from large emergence traps and light traps to estimate additional life cycle parameters, emergence rates, and total gnathiid density on substrate, and to calibrate the light trap design to provide estimates of rate of emergence and total gnathiid density in habitat not amenable to emergence trap deployment.

  10. Multi-decadal responses of a cod (Gadus morhua) population to human-induced trophic changes, fishing, and climate

    DEFF Research Database (Denmark)

    Eero, Margit; MacKenzie, Brian; Köster, Fritz

    2011-01-01

    to changes in fish populations can be analyzed with empirical data. In this study we investigate how climate variability and multiple human impacts (fishing, marine mammal hunting, eutrophication) have affected multi-decadal scale dynamics of cod in the Baltic Sea during the 20th century.We document...... significant climate-driven variations in cod recruitment production at multi-annual timescales, which had major impacts on population dynamics and the yields to commercial fisheries. We also quantify the roles of marine mammal predation, eutrophication, and exploitation on the development of the cod...

  11. Body size and geographic range do not explain long term variation in fish populations: a Bayesian phylogenetic approach to testing assembly processes in stream fish assemblages.

    Directory of Open Access Journals (Sweden)

    Stephen J Jacquemin

    Full Text Available We combine evolutionary biology and community ecology to test whether two species traits, body size and geographic range, explain long term variation in local scale freshwater stream fish assemblages. Body size and geographic range are expected to influence several aspects of fish ecology, via relationships with niche breadth, dispersal, and abundance. These traits are expected to scale inversely with niche breadth or current abundance, and to scale directly with dispersal potential. However, their utility to explain long term temporal patterns in local scale abundance is not known. Comparative methods employing an existing molecular phylogeny were used to incorporate evolutionary relatedness in a test for covariation of body size and geographic range with long term (1983 - 2010 local scale population variation of fishes in West Fork White River (Indiana, USA. The Bayesian model incorporating phylogenetic uncertainty and correlated predictors indicated that neither body size nor geographic range explained significant variation in population fluctuations over a 28 year period. Phylogenetic signal data indicated that body size and geographic range were less similar among taxa than expected if trait evolution followed a purely random walk. We interpret this as evidence that local scale population variation may be influenced less by species-level traits such as body size or geographic range, and instead may be influenced more strongly by a taxon's local scale habitat and biotic assemblages.

  12. Use of population viability analysis to evaluate CITES trade-management options for threatened marine fishes.

    Science.gov (United States)

    Curtis, Janelle M R; Vincent, Amanda C J

    2008-10-01

    Achieving multiple conservation objectives can be challenging, particularly under high uncertainty. Having agreed to limit seahorse (Hippocampus) exports to sustainable levels, signatories to the Convention on International Trade in Endangered Species of Wild Fauna and Flora (CITES) were offered the option of a single 10-cm minimum size limit (MSL) as an interim management measure for all Hippocampus species (> or =34). Although diverse stakeholders supported the recommended MSL, its biological and socioeconomic implications were not assessed quantitatively. We combined population viability analysis, model sensitivity analysis, and economic information to evaluate the trade-off between conservation threat to and long-term cumulative income from these exploited marine fishes of high conservation concern. We used the European long-snouted seahorse (Hippocampus guttulatus) as a representative species to compare the performance of MSLs set at alternative biological reference points. Our sensitivity analyses showed that in most of our scenarios, setting the MSL just above size at maturity (9.7 cm in H. guttulatus) would not prevent exploited populations from becoming listed as vulnerable. By contrast, the relative risk of decline and extinction were almost halved--at a cost of only a 5.6% reduction in long-term catches--by increasing the MSL to the size reached after at least one full reproductive season. On the basis of our analysis, a precautionary increase in the MSL could be compatible with sustaining fishers' livelihoods and international trade. Such management tactics that aid species conservation and have minimal effects on long term catch trends may help bolster the case for CITES trade management of other valuable marine fishes.

  13. Mercury concentrations in China's coastal waters and implications for fish consumption by vulnerable populations

    International Nuclear Information System (INIS)

    Tong, Yindong; Wang, Mengzhu; Bu, Xiaoge; Guo, Xin; Lin, Yan; Lin, Huiming; Li, Jing; Zhang, Wei; Wang, Xuejun

    2017-01-01

    We assessed mercury (Hg) pollution in China's coastal waters, including the Bohai Sea, the Yellow Sea, the East China Sea and the South China Sea, based on a nationwide dataset from 301 sampling sites. A methylmercury (MeHg) intake model for humans based on the marine food chain and human fish consumption was established to determine the linkage between water pollutants and the pollutant intake by humans. The predicted MeHg concentration in fish from the Bohai Sea was the highest among the four seas included in the study. The MeHg intake through dietary ingestion was dominant for the fish and was considerably higher than the MeHg intake through water respiration. The predicted MeHg concentrations in human blood in the coastal regions of China ranged from 1.37 to 2.77 μg/L for pregnant woman and from 0.43 to 1.00 μg/L for infants, respectively, based on different diet sources. The carnivorous fish consumption advisory for pregnant women was estimated to be 288–654 g per week to maintain MeHg concentrations in human blood at levels below the threshold level (4.4 μg/L established by the US Environmental Protection Agency). With a 50% increase in Hg concentrations in water in the Bohai Sea, the bioaccumulated MeHg concentration (4.5 μg/L) in the fish consumers will be higher than the threshold level. This study demonstrates the importance in controlling Hg pollution in China's coastal waters. An official recommendation guideline for the fish consumption rate and its sources will be necessary for vulnerable populations in China. - Graphical abstract: MeHg transfer route from the marine food chain to vulnerable population. - Highlights: • Predicted MeHg concentrations in pregnant woman and infant’s blood in China’s coastal regions are below threshold level. • The carnivorous fish consumption advisory for pregnant women is estimated to be 288–654 g per week. g • If with a 50% increase in Hg in Bohai Sea, the bioaccumulated MeHg concentration in

  14. Environmental Assessment: Lake Yankton Fish Population Renovation Project Yankton County, South Dakota and Cedar County, Nebraska

    Science.gov (United States)

    2014-08-01

    respiration in fish, mammals, birds, insects, reptiles , amphibians , and plants. However, at concentrations used in fisheries management, rotenone is...prey upon fish, rodents, and small game. Lake Yankton supports many species of fish, reptiles , and amphibians . The Preferred Alternative is not...3‐4  3.2.1.3.  Amphibians

  15. Diagnostic methodology is critical for accurately determining the prevalence of Ichthyophonus infections in wild fish populations.

    Science.gov (United States)

    Kocan, Richard; Dolan, Heather; Hershberger, Paul

    2011-04-01

    Several different techniques have been employed to detect and identify Ichthyophonus spp. in infected fish hosts; these include macroscopic observation, microscopic examination of tissue squashes, histological evaluation, in vitro culture, and molecular techniques. Examination of the peer-reviewed literature revealed that when more than 1 diagnostic method is used, they often result in significantly different results; for example, when in vitro culture was used to identify infected trout in an experimentally exposed population, 98.7% of infected trout were detected, but when standard histology was used to confirm known infected tissues from wild salmon, it detected ~50% of low-intensity infections and ~85% of high-intensity infections. Other studies on different species reported similar differences. When we examined a possible mechanism to explain the disparity between different diagnostic techniques, we observed non-random distribution of the parasite in 3-dimensionally visualized tissue sections from infected hosts, thus providing a possible explanation for the different sensitivities of commonly used diagnostic techniques. Based on experimental evidence and a review of the peer-reviewed literature, we have concluded that in vitro culture is currently the most accurate diagnostic technique for determining infection prevalence of Ichthyophonus , particularly when the exposure history of the population is not known.

  16. Relationship between snail population density and infection status of snails and fish with zoonotic trematodes in Vietnamese carp nurseries

    DEFF Research Database (Denmark)

    Clausen, Jesper Hedegaard; Madsen, Henry; Murrell, Kenneth Darwin

    2012-01-01

    ponds. Previous risk assessment on FZT transmission in the Red River Delta of Vietnam identified carp nursery ponds as major sites of transmission. In this study, we analyzed the association between snail population density and heterophyid trematode infection in snails with the rate of FZT transmission...... to juvenile fish raised in carp nurseries....

  17. Bioaccumulation of trace metals and total petroleum and genotoxicity responses in an edible fish population as indicators of marine pollution.

    Science.gov (United States)

    D'Costa, Avelyno; Shyama, S K; Praveen Kumar, M K

    2017-08-01

    The present study reports the genetic damage and the concentrations of trace metals and total petroleum hydrocarbons prevailing in natural populations of an edible fish, Arius arius in different seasons along the coast of Goa, India as an indicator of the pollution status of coastal water. Fish were collected from a suspected polluted site and a reference site in the pre-monsoon, monsoon and post-monsoon seasons. Physico-chemical parameters as well as the concentrations of total petroleum hydrocarbons (TPH) and trace metals in the water and sediment as well as the tissues of fish collected from these sites were recorded. The genotoxicity status of the fish was assessed employing the micronucleus test and comet assay. A positive correlation (p<0.001) was observed between the tail DNA and micronuclei in all the fish collected. Multiple regression analysis revealed that tissue and environmental pollutant concentrations and genotoxicity were positively associated and higher in the tissues of the fish collected from the polluted site. Pollution indicators and genotoxicity tests, combined with other physiological or biochemical parameters represent an essential integrated approach for efficient monitoring of aquatic ecosystems in Goa. Copyright © 2017 Elsevier Inc. All rights reserved.

  18. The dynamics of fish populations in the Palancar stream, a small tributary of the river Guadalquivir, Spain

    OpenAIRE

    Bravo, R.; Soriguer, M.C.; Villar, N.; Hernando, J.A.

    2000-01-01

    The relationship between flooding and changes in the size distribution of fish populations in the Palancar stream confirms observations in other rivers. On average, density decreased by 36.2 % and biomass increased by 14.5 %, passing from a period of severe drought to one of heavier than normal rains. Precipitation is the most important of the many factors affecting the populations of the Palancar stream; the most evident changes all occurred after the drought. During the drought per...

  19. Combination of genetics and spatial modelling highlights the sensitivity of cod (Gadus morhua) population diversity in the North Sea to distributions of fishing

    DEFF Research Database (Denmark)

    Heath, Michael R.; Culling, Mark A.; Crozier, Walter W.

    2014-01-01

    Conserving genetic diversity in animal populations is important for sustaining their ability to respond to environmental change. However, the “between-population” component of genetic diversity (biocomplexity) is threatened in many exploited populations, particularly marine fish, where harvest ma...

  20. Determination of a site-specific reference dose for methylmercury for fish-eating populations.

    Science.gov (United States)

    Shipp, A M; Gentry, P R; Lawrence, G; Van Landingham, C; Covington, T; Clewell, H J; Gribben, K; Crump, K

    2000-11-01

    methylmercury, the exposures of concern for the Point Comfort site are from the chronic consumption of relatively low concentrations of methylmercury in fish. Since the publication of the USEPA RfD, several analyses of chronic exposure to methylmercury in fish-eating populations have been reported. The purpose of the analysis reported here was to evaluate the possibility of deriving an RfD for methylmercury, specifically for the case of fish ingestion, on the basis of these new studies. In order to better support the risk-management decisions associated with developing a remediation approach for the site in question, the analysis was designed to provide information on the distribution of acceptable ingestion rates across a population, which could reasonably be expected to be consistent with the results of the epidemiological studies of other fish-eating populations. Based on a review of the available literature on the effects of methylmercury, a study conducted with a population in the Seychelles Islands was selected as the critical study for this analysis. The exposures to methylmercury in this population result from chronic, multigenerational ingestion of contaminated fish. This prospective study was carefully conducted and analyzed, included a large cohort of mother-infant pairs, and was relatively free of confounding factors. The results of this study are essentially negative, and a no-observed-adverse-effect level (NOAEL) derived from the estimated exposures has recently been used by the Agency for Toxic Substances and Disease Registry (ATSDR) as the basis for a chronic oral minimal risk level (MRL) for methylmercury. In spite of the fact that no statistically significant effects were observed in this study, the data as reported are suitable for dose-response analysis using the BMD method. Evaluation of the BMD method used in this analysis, as well as in the current USEPA RfD, has demonstrated that the resulting 95% lower bound on the 10% benchmark dose (BMDL) represents a

  1. Can Intrapartum Cardiotocography Predict Uterine Rupture among Women with Prior Caesarean Delivery?: A Population Based Case-Control Study.

    Directory of Open Access Journals (Sweden)

    Malene M Andersen

    Full Text Available To compare cardiotocographic abnormalities recorded during labour in women with prior caesarean delivery (CD and complete uterine rupture with those recorded in controls with prior CD without uterine rupture.Women with complete uterine rupture during labour between 1997 and 2008 were identified in the Danish Medical Birth Registry (n = 181. Cases were validated by review of medical records and 53 cases with prior CD, trial of labour, available cardiotocogram (CTG and complete uterine rupture were included and compared with 43 controls with prior CD, trial of labour and available CTG. The CTG tracings were assessed by 19 independent experts divided into groups of three different experts for each tracing. The assessors were blinded to group, outcome and clinical data. They analyzed occurrence of defined abnormalities and classified the traces as normal, suspicious, pathological or pre-terminal according to international guidelines (FIGO.A pathological CTG during the first stage of labour was present in 77% of cases and in 53% of the controls (OR 2.58 [CI: 0.96-6.94] P = 0.066. Fetal tachycardia was more frequent in cases with uterine rupture (OR 2.50 [CI: 1.0-6.26] P = 0.053. Significantly more cases showed more than 10 severe variable decelerations compared with controls (OR 22 [CI: 1.54-314.2] P = 0.022. Uterine tachysystole was not correlated with the presence of uterine rupture.A pathological cardiotocogram should lead to particular attention on threatening uterine rupture but cannot be considered a strong predictor as it is common in all women with trial of labour after caesarean delivery.

  2. Development of an autonomous treatment planning strategy for radiation therapy with effective use of population-based prior data.

    Science.gov (United States)

    Wang, Huan; Dong, Peng; Liu, Hongcheng; Xing, Lei

    2017-02-01

    Current treatment planning remains a costly and labor intensive procedure and requires multiple trial-and-error adjustments of system parameters such as the weighting factors and prescriptions. The purpose of this work is to develop an autonomous treatment planning strategy with effective use of prior knowledge and in a clinically realistic treatment planning platform to facilitate radiation therapy workflow. Our technique consists of three major components: (i) a clinical treatment planning system (TPS); (ii) a formulation of decision-function constructed using an assemble of prior treatment plans; (iii) a plan evaluator or decision-function and an outer-loop optimization independent of the clinical TPS to assess the TPS-generated plan and to drive the search toward a solution optimizing the decision-function. Microsoft (MS) Visual Studio Coded UI is applied to record some common planner-TPS interactions as subroutines for querying and interacting with the TPS. These subroutines are called back in the outer-loop optimization program to navigate the plan selection process through the solution space iteratively. The utility of the approach is demonstrated by using clinical prostate and head-and-neck cases. An autonomous treatment planning technique with effective use of an assemble of prior treatment plans is developed to automatically maneuver the clinical treatment planning process in the platform of a commercial TPS. The process mimics the decision-making process of a human planner and provides a clinically sensible treatment plan automatically, thus reducing/eliminating the tedious manual trial-and-errors of treatment planning. It is found that the prostate and head-and-neck treatment plans generated using the approach compare favorably with that used for the patients' actual treatments. Clinical inverse treatment planning process can be automated effectively with the guidance of an assemble of prior treatment plans. The approach has the potential to

  3. Diabetes patients requiring glucose-lowering therapy and nondiabetics with a prior myocardial infarction carry the same cardiovascular risk: a population study of 3.3 million people

    DEFF Research Database (Denmark)

    Schramm, Tina Ken; Gislason, Gunnar H; Køber, Lars

    2008-01-01

    BACKGROUND: Previous studies reveal major differences in the estimated cardiovascular risk in diabetes mellitus, including uncertainty about the risk in young patients. Therefore, large studies of well-defined populations are needed. METHODS AND RESULTS: All residents in Denmark > or = 30 years...... of age were followed up for 5 years (1997 to 2002) by individual-level linkage of nationwide registers. Diabetes patients receiving glucose-lowering medications and nondiabetics with and without a prior myocardial infarction were compared. At baseline, 71 801 (2.2%) had diabetes mellitus and 79 575 (2.......4%) had a prior myocardial infarction. Regardless of age, age-adjusted Cox proportional-hazard ratios for cardiovascular death were 2.42 (95% confidence interval [CI], 2.35 to 2.49) in men with diabetes mellitus without a prior myocardial infarction and 2.44 (95% CI, 2.39 to 2.49) in nondiabetic men...

  4. A model describing the effect of sex-reversed YY fish in an established wild population: The use of a Trojan Y chromosome to cause extinction of an introduced exotic species.

    Science.gov (United States)

    Gutierrez, Juan B; Teem, John L

    2006-07-21

    A novel means of inducing extinction of an exotic fish population is proposed using a genetic approach to shift the ratio of male to females within a population. In the proposed strategy, sex-reversed fish containing two Y chromosomes are introduced into a normal fish population. These YY fish result in the production of a disproportionate number of male fish in subsequent generations. Mathematical modeling of the system following introduction of YY fish at a constant rate reveals that female fish decline in numbers over time, leading to eventual extinction of the population.

  5. Population Structure and Adaptive Divergence in a High Gene Flow Marine Fish: The Small Yellow Croaker (Larimichthys polyactis.

    Directory of Open Access Journals (Sweden)

    Bing-Jian Liu

    Full Text Available The spatial distribution of genetic diversity has been long considered as a key component of policy development for management and conservation of marine fishes. However, unraveling the population genetic structure of migratory fish species is challenging due to high potential for gene flow. Despite the shallow population differentiation revealed by putatively neutral loci, the higher genetic differentiation with panels of putatively adaptive loci could provide greater resolution for stock identification. Here, patterns of population differentiation of small yellow croaker (Larimichthys polyactis were investigated by genotyping 15 highly polymorphic microsatellites in 337 individuals of 15 geographic populations collected from both spawning and overwintering grounds. Outlier analyses indicated that the locus Lpol03 might be under directional selection, which showed a strong homology with Grid2 gene encoding the glutamate receptor δ2 protein (GluRδ2. Based on Lpol03, two distinct clusters were identified by both STRUCTURE and PCoA analyses, suggesting that there were two overwintering aggregations of L. polyactis. A novel migration pattern was suggested for L. polyactis, which was inconsistent with results of previous studies based on historical fishing yield statistics. These results provided new perspectives on the population genetic structure and migratory routes of L. polyactis, which could have significant implications for sustainable management and utilization of this important fishery resource.

  6. Large-scale, multidirectional larval connectivity among coral reef fish populations in the Great Barrier Reef Marine Park

    KAUST Repository

    Williamson, David H.

    2016-11-15

    Larval dispersal is the key process by which populations of most marine fishes and invertebrates are connected and replenished. Advances in larval tagging and genetics have enhanced our capacity to track larval dispersal, assess scales of population connectivity, and quantify larval exchange among no-take marine reserves and fished areas. Recent studies have found that reserves can be a significant source of recruits for populations up to 40 km away, but the scale and direction of larval connectivity across larger seascapes remain unknown. Here, we apply genetic parentage analysis to investigate larval dispersal patterns for two exploited coral reef groupers (Plectropomus maculatus and Plectropomus leopardus) within and among three clusters of reefs separated by 60–220 km within the Great Barrier Reef Marine Park, Australia. A total of 69 juvenile P. maculatus and 17 juvenile P. leopardus (representing 6% and 9% of the total juveniles sampled, respectively) were genetically assigned to parent individuals on reefs within the study area. We identified both short-distance larval dispersal within regions (200 m to 50 km) and long-distance, multidirectional dispersal of up to ~250 km among regions. Dispersal strength declined significantly with distance, with best-fit dispersal kernels estimating median dispersal distances of ~110 km for P. maculatus and ~190 km for P. leopardus. Larval exchange among reefs demonstrates that established reserves form a highly connected network and contribute larvae for the replenishment of fished reefs at multiple spatial scales. Our findings highlight the potential for long-distance dispersal in an important group of reef fishes, and provide further evidence that effectively protected reserves can yield recruitment and sustainability benefits for exploited fish populations.

  7. Large-scale, multidirectional larval connectivity among coral reef fish populations in the Great Barrier Reef Marine Park

    KAUST Repository

    Williamson, David H.; Harrison, Hugo B.; Almany, Glenn R.; Berumen, Michael L.; Bode, Michael; Bonin, Mary C.; Choukroun, Severine; Doherty, Peter J.; Frisch, Ashley J.; Saenz-Agudelo, Pablo; Jones, Geoffrey P.

    2016-01-01

    Larval dispersal is the key process by which populations of most marine fishes and invertebrates are connected and replenished. Advances in larval tagging and genetics have enhanced our capacity to track larval dispersal, assess scales of population connectivity, and quantify larval exchange among no-take marine reserves and fished areas. Recent studies have found that reserves can be a significant source of recruits for populations up to 40 km away, but the scale and direction of larval connectivity across larger seascapes remain unknown. Here, we apply genetic parentage analysis to investigate larval dispersal patterns for two exploited coral reef groupers (Plectropomus maculatus and Plectropomus leopardus) within and among three clusters of reefs separated by 60–220 km within the Great Barrier Reef Marine Park, Australia. A total of 69 juvenile P. maculatus and 17 juvenile P. leopardus (representing 6% and 9% of the total juveniles sampled, respectively) were genetically assigned to parent individuals on reefs within the study area. We identified both short-distance larval dispersal within regions (200 m to 50 km) and long-distance, multidirectional dispersal of up to ~250 km among regions. Dispersal strength declined significantly with distance, with best-fit dispersal kernels estimating median dispersal distances of ~110 km for P. maculatus and ~190 km for P. leopardus. Larval exchange among reefs demonstrates that established reserves form a highly connected network and contribute larvae for the replenishment of fished reefs at multiple spatial scales. Our findings highlight the potential for long-distance dispersal in an important group of reef fishes, and provide further evidence that effectively protected reserves can yield recruitment and sustainability benefits for exploited fish populations.

  8. Upper Caraş River (Danube watershed fish populations fragmentation – technical rehabilitation proposal

    Directory of Open Access Journals (Sweden)

    Voicu Răzvan

    2018-01-01

    Full Text Available We propose a technical solution for fish movement based on the flow of water over a spill threshold. Such barriers are common in the Danube system. The proposed system has a range of operating components which are easily detachable from the spill threshold, are resistant to corrosion and will not harm the fish. In fact, if designed to complement swimming abilities of target fish, it should provide adequate passage for both adults and juveniles. If implemented correctly, the design may offer a solution to help displaced fish recolonize upstream habitats.

  9. Ancient DNA reveals substantial genetic diversity in the California Condor (Gymnogyps californianus) prior to a population bottleneck

    Science.gov (United States)

    D'Elia, Jesse; Haig, Susan M.; Mullins, Thomas D.; Miller, Mark P.

    2016-01-01

    Critically endangered species that have undergone severe population bottlenecks often have little remaining genetic variation, making it difficult to reconstruct population histories to apply in reintroduction and recovery strategies. By using ancient DNA techniques, it is possible to combine genetic evidence from the historical population with contemporary samples to provide a more complete picture of a species' genetic variation across its historical range and through time. Applying this approach, we examined changes in the mitochondrial DNA (mtDNA) control region (526 base pairs) of the endangered California Condor (Gymnogyps californianus). Results showed a >80% reduction in unique haplotypes over the past 2 centuries. We found no spatial sorting of haplotypes in the historical population; the periphery of the range contained haplotypes that were common throughout the historical range. Direct examination of mtDNA from California Condor museum specimens provided a new window into historical population connectivity and genetic diversity showing: (1) a substantial loss of haplotypes, which is consistent with the hypothesis that condors were relatively abundant in the nineteenth century, but declined rapidly as a result of human-caused mortality; and (2) no evidence of historical population segregation, meaning that the available genetic data offer no cause to avoid releasing condors in unoccupied portions of their historical range.

  10. Activity concentration and population dose from natural occurring radionuclide (40K) due to consumption of fresh water fish

    International Nuclear Information System (INIS)

    Jha, M.K.; Patra, A.K.; Jaison, T.J.; Ravi, P.M.; Tripathi, R.M.

    2015-01-01

    The objective of this study was to measure the concentration of natural occurring radionuclide ( 40 K) in different fresh water fish collected from Moticher lake near Kakrapar, Gujarat. The three types of commonly available fresh water fish in Moticher lake are Notopterus sps, Ophiocephalus sps. and Tor sps. The 40 K activity (Bq/kg flesh wt.) was found to be in the range of 38-100 (Notopterus sps.), 33-123 (Ophiocephalus sps.) and 80-116 (Tor sps.) respectively. The ingestion dose (μSv/y) to the adult population around Kakrapar was estimated due to the consumption of fresh water fish and found to be in the range of 7.7-20.5 (Notopterus sps.), 6.8-25.0 (Ophiocephalus sps.) and 16.0-24.0 (Tor sps.) respectively. (author)

  11. Differences in the metabolic rates of exploited and unexploited fish populations: a signature of recreational fisheries induced evolution?

    Directory of Open Access Journals (Sweden)

    Jan-Michael Hessenauer

    Full Text Available Non-random mortality associated with commercial and recreational fisheries have the potential to cause evolutionary changes in fish populations. Inland recreational fisheries offer unique opportunities for the study of fisheries induced evolution due to the ability to replicate study systems, limited gene flow among populations, and the existence of unexploited reference populations. Experimental research has demonstrated that angling vulnerability is heritable in Largemouth Bass Micropterus salmoides, and is correlated with elevated resting metabolic rates (RMR and higher fitness. However, whether such differences are present in wild populations is unclear. This study sought to quantify differences in RMR among replicated exploited and unexploited populations of Largemouth Bass. We collected age-0 Largemouth Bass from two Connecticut drinking water reservoirs unexploited by anglers for almost a century, and two exploited lakes, then transported and reared them in the same pond. Field RMR of individuals from each population was quantified using intermittent-flow respirometry. Individuals from unexploited reservoirs had a significantly higher mean RMR (6% than individuals from exploited populations. These findings are consistent with expectations derived from artificial selection by angling on Largemouth Bass, suggesting that recreational angling may act as an evolutionary force influencing the metabolic rates of fishes in the wild. Reduced RMR as a result of fisheries induced evolution may have ecosystem level effects on energy demand, and be common in exploited recreational populations globally.

  12. Sex Differences in the Relationship between Sleep Behavior, Fish Consumption, and Depressive Symptoms in the General Population of South Korea.

    Science.gov (United States)

    Supartini, Atin; Oishi, Taro; Yagi, Nobuyuki

    2017-07-14

    Sleep, fish consumption, and depression have a close relationship; however, the role of sex differences in sleep, fish consumption, and depression research is not yet well-established. This study aimed to examine whether the impact of bedtime, sleep-onset latency, sleep duration, sleep quality, and fish consumption on depressive symptoms differed in women and men. An online survey was conducted in South Korea with a stratified random sample of 600 participants between the ages of 20 and 69, whose gender and age were proportional to estimates of Korea's general population. The 20-item Center for Epidemiologic Studies Depression Scale was used to measure depressive symptoms with a cut-off score of 16. The Pittsburgh Sleep Quality Index (PSQI) was applied to evaluate sleep timing, sleep-onset latency, sleep duration, and sleep quality. Our results indicated that late bedtime and short sleep duration were independently associated with depressive symptoms in women. Sleep-onset latency and poor sleep quality were independently associated with increased prevalence of depressive symptoms in both men and women. Higher fish consumption was significantly associated with decreased prevalence of depressive symptoms in men only. Our findings suggested the importance of a different approach for men and women in terms of promoting healthy sleep habits. In addition, higher fish consumption may be beneficial in the primary prevention of depression in Korean men. Further research is needed to confirm the findings from this cross-sectional study.

  13. The diet of otters ( Lutra lutra L.) in Danish freshwater habitats : comparisons of prey fish populations

    DEFF Research Database (Denmark)

    Taastrom, H.M.; Jacobsen, Lene

    1999-01-01

    Otter spraints from five Danish freshwater localities were analysed. In all localities fish was the main prey (76-99% of estimated bulk), especially in winter. Depending on locality, the prey fish mainly consisted of cyprinids (Cyprinidae), percids (Percidae) or salmonids (Salmonidae). Seasonal v...

  14. Fish consumption and plasma levels of organochlorines in a female population in Northern Norway.

    Science.gov (United States)

    Furberg, Anne-Sofie; Sandanger, Torkjel; Thune, Inger; Burkow, Ivan C; Lun, Eiliv

    2002-02-01

    Increased cancer incidence and mortality have been found among humans exposed to high levels of organochlorines (OCs), either accidentally or as industrial workers. In order to assess levels of OCs in Norwegian women north of the Arctic Circle and validate self-reported fish consumption as a surrogate measure of organochlorine body burden, concentrations of seven polychlorinated biphenyl (PCB) congeners [IUPAC Nos. CB-105, CB-118, CB-138 (+ CB-163), CB-153, CB-180, CB-183, CB-187], beta-hexachlorocyclohexane (beta-HCH), 2,2'-bis(p-chlorophenyl)-1,1-dichloroethylene (p,p'-DDE) and cis- and trains-chlordane (c-CD and t-CD) were examined in plasma samples of middle-aged women attending for health screening. Altogether, 47 of those invited (81%) completed a questionnaire and donated a suitable blood sample. The ability of questionnaire data to predict plasma levels of OCs was tested in linear and logistic regression analyses. Measured plasma concentrations were in the range reported for the general female population of other Western countries and the relative amounts of PCBs were similar to the circumpolar pattern. Intake of seagulls' eggs was a predictor of PCB congeners CB-138 (+CB-163) (p<0.05) and CB-153 (p<0.01). No other food category was positively associated with any compound. In contrast, duration of residence in the study municipality, body mass index (BMI) and lifetime lactation (months) were the best univariate predictors. There was an increase in beta-HCH, p,p'-DDE and most of the PCBs (p<0.05 for all) with increasing length of time a subject had lived in the municipality. BMI was a positive predictor for beta-HCH (OR=3.10, 95% CI 1.50-6.43, per 5 kgm(-2)), chlordane (OR=2.13, 95% CI 1.12-4.05, per 5 kgm(-2)) and CB-105 and CB-153 (p<0.05 for both). Lactation was negatively associated with all OCs (p<0.05), except chlordane and two of the PCB congeners. Time living in the municipality and lactation explained 34%, of the variance in concentration of total

  15. Consequences of the size structure of fish populations for their effects on a generalist avian predator.

    Science.gov (United States)

    Kloskowski, Janusz

    2011-06-01

    Size-structured interspecific interactions can shift between predation and competition, depending on ontogenetic changes in size relationships. I examined the effects of common carp (Cyprinus carpio), an omnivorous fish, on the reproductive success of the red-necked grebe (Podiceps grisegena), an avian gape-limited predator, along a fish size gradient created by stocking distinct age-cohorts in seminatural ponds. Young-of-the-year (0+) carp were an essential food source for young grebes. Only adult birds were able to consume 1-year-old (1+) fish, while 2-year-old (2+) fish attained a size refuge from grebes. Amphibian larvae were the principal alternative prey to fish, followed by macroinvertebrates, but the abundance of both dramatically decreased along the carp size gradient. Fledging success was 2.8 times greater in ponds with 0+ versus 1+ carp; in ponds with 1+ carp, chicks received on average 2.6-3 times less prey biomass from their parents, and over 1/3 of broods suffered total failure. Breeding birds avoided settling on 2+ ponds. These results show that changes in prey fish size structure can account for shifts from positive trophic effects on the avian predator to a negative impact on the predator's alternative resources. However, competition did not fully explain the decrease in grebe food resources in the presence of large fish, as carp and grebes overlapped little in diet. In experimental cages, 1+ carp totally eliminated young larvae of amphibians palatable to fish. In field conditions, breeding adults of palatable taxa avoided ponds with 1+ and older carp. Non-trophic interactions such as habitat selection by amphibians or macroinvertebrates to avoid large fish may provide an indirect mechanism strengthening the adverse bottom-up effects of fish on birds.

  16. Fish populations under stress. The example of the Lower Neckar river; Fischpopulationen unter Stress. Das Beispiel des Unteren Neckars

    Energy Technology Data Exchange (ETDEWEB)

    Braunbeck, Thomas; Brauns, Annika; Keiter, Steffen [Sektion Aquatische Oekologie und Toxikologie, Univ. Heidelberg (Germany); Hollert, Henner [Inst. fuer Umweltforschung (Biologie V), Lehr- und Forschungsgebiet Oekosystemanalyse, Rheinisch-Westfaelische Technische Hochschule Aachen, Aachen (Germany); Schwartz, Patrick [Basel Univ. (CH). Mensch-Gesellschaft-Umwelt (MGU)

    2009-04-15

    Background, aim, and scope: Reports about declines or unusual structures of fish populations in native aquatic systems in Central Europe and North America are in sharp contrast to an obvious improvement of general water quality. The Neckar River may serve as an example of a formerly severely contaminated freshwater system in Southern Germany, the ecological situation of which could be substantially improved over the last three decades. Nevertheless, there are still deficits in the composition of the fish fauna, which cannot be explained by conventional chemical-analytical, hydromorphological and limnological methodologies. Therefore, in search of explanations for ecological deficits, ecotoxicological investigations with an increasing focus on sediment contamination have been performed along the Lower Neckar River over a period of 10 years. In addition to sediment tests, fish populations were screened for genotoxic and embryotoxic effects as well as alterations in the structure of central metabolic organs such as the liver. Materials and methods: Roach (Rutilus rutilus) and gudgeon (Gobio gobio) from the Lower Neckar River were studied with respect to histo- and cytological alterations of the liver as well as the induction of genotoxicity in liver, gut, gills and blood cells by means of the comet and micronucleus assays. At the same time, both native sediments and acetonic sediment extracts were tested for toxicity to zebrafish (Danio rerio) embryos and permanent fish cell cultures. Results: Massive disturbances of the liver ultrastructure indicate severe stress in the fish from the Lower Neckar River despite good supply of nutrition. Both cyto- and embryotoxicity tests document a considerable toxic potential of sediments from the Lower Neckar River, and results of both the comet assay and the micronucleus test provide evidence of the presence of genotoxic agents in the sediments and their effects in fish. There has been no decrease of genotoxicity over the last 10

  17. Mercury exposure through fish consumption in riparian populations at reservoir Guri, using nuclear techniques, Bolivar State, Venezuela

    Energy Technology Data Exchange (ETDEWEB)

    Bermudez, Dario; Gali, Gladys; Carneiro, Flor; Paolini, Jorge; Venegas, Gladys; Marquez, Oscar

    2001-07-01

    The reservoir Guri located at the south of Venezuela in Bolivar State arose from damming the Caroni river and its main tributary, the Paraguay river. It was built between the years 1963 and 1986. The reservoir, whose primary use is the electric power generation followed by others beneficial uses such as water supply and recreation, was opened to commercial fishing recently. The riparian population is about 8,030 inhabitants: 7,389 toward the left side (west) and 641 toward the right side (cast) and it is distributed in populated centers, villages and in dispersed areas. The young population is the most conspicuous: 46 % and 52% on the right and left sides, respectively, with predominance of the masculine sex (86%). The reservoir Guri, the same as some reservoirs from other countries has shown what has been called 'dam effect', a term used to designate the occurrence of bioaccumulation process in reservoirs due to the high mercury levels found mainly in piscivorous fish species which are the most preferred by fish consumers. In a sample of 42 specimens of the carnivorous trophic level, the average value of total mercury was 1. 90 ppm, with a maximum value of 6.04 ppm. For the detritivorous trophic level, in a sample of 17 specimens, the average value of total mercury was 0.27 ppm, with a maximum value of 0.69 ppm, while for the omnivorous trophic level, in a sample of 6 specimens, the average value of total mercury was 0.55 ppm, with a maximum value of 0.99 ppm. The source of mercury in fishes from reservoir Guri has not been determined; however, in some sectors of the flooded area activities were carried out of exploitation of aluvional gold using metallic mercury for gold recovery and burning the amalgam at open ceiling. The objective of this research project is to determine the relationship among the ingestion of fish coming from reservoir Guri, the levels of organic mercury in hair and the appearance of signs and symptoms of neurotoxicity in a sample

  18. Mercury exposure through fish consumption in riparian populations at reservoir Guri, using nuclear techniques, Bolivar State, Venezuela

    International Nuclear Information System (INIS)

    Bermudez, Dario; Gali, Gladys; Carneiro, Flor; Paolini, Jorge; Venegas, Gladys; Marquez, Oscar

    2001-01-01

    The reservoir Guri located at the south of Venezuela in Bolivar State arose from damming the Caroni river and its main tributary, the Paraguay river. It was built between the years 1963 and 1986. The reservoir, whose primary use is the electric power generation followed by others beneficial uses such as water supply and recreation, was opened to commercial fishing recently. The riparian population is about 8,030 inhabitants: 7,389 toward the left side (west) and 641 toward the right side (cast) and it is distributed in populated centers, villages and in dispersed areas. The young population is the most conspicuous: 46 % and 52% on the right and left sides, respectively, with predominance of the masculine sex (86%). The reservoir Guri, the same as some reservoirs from other countries has shown what has been called 'dam effect', a term used to designate the occurrence of bioaccumulation process in reservoirs due to the high mercury levels found mainly in piscivorous fish species which are the most preferred by fish consumers. In a sample of 42 specimens of the carnivorous trophic level, the average value of total mercury was 1. 90 ppm, with a maximum value of 6.04 ppm. For the detritivorous trophic level, in a sample of 17 specimens, the average value of total mercury was 0.27 ppm, with a maximum value of 0.69 ppm, while for the omnivorous trophic level, in a sample of 6 specimens, the average value of total mercury was 0.55 ppm, with a maximum value of 0.99 ppm. The source of mercury in fishes from reservoir Guri has not been determined; however, in some sectors of the flooded area activities were carried out of exploitation of aluvional gold using metallic mercury for gold recovery and burning the amalgam at open ceiling. The objective of this research project is to determine the relationship among the ingestion of fish coming from reservoir Guri, the levels of organic mercury in hair and the appearance of signs and symptoms of neurotoxicity in a sample

  19. Selective exploitation of large pike Esox lucius-Effects on mercury concentrations in fish populations

    International Nuclear Information System (INIS)

    Sharma, Chhatra Mani; Borgstrom, Reidar; Huitfeldt, Jorgen Sinkaberg; Rosseland, Bjorn Olav

    2008-01-01

    The present study outlines two main trends of mercury transfer patterns through the fish community: 1) the Hg concentrations increase with increase in the trophic level, with top predators having the highest concentrations, and 2) a fast growth rate may dilute the concentrations of Hg in fish muscle tissue (growth biodilution). In 2004, an extensive reduction in number of large pike (Esox lucius L.), was initiated by selective gillnet fishing in Lake Arungen, Norway, in order to increase the pike recruitment due to an expected reduction in cannibalism. In this connection, total mercury (THg) concentrations in the fish community were studied both before (2003) and after (2005) the removal of large pike. The δ 15 N signatures and stomach content analyses indicated that pike and perch (Perca fluviatilis L.) occupied the highest trophic position, while roach (Rutilus rutilus (L.)) was at the lower level, and rudd (Scardinius erythrophthalmus L.) at the lowest. The piscivores, pike and perch, had the highest concentrations of THg. The biomagnification rate of THg through the food web in the fish community was 0.163 ( per milleδ 15 N), with the highest uptake rate (0.232) in perch. A significant decrease in THg concentrations was found in all fish species in 2005 compared to 2003. Removal of the top predators in an Hg contaminated lake might thus be an important management tool for reducing Hg levels in fish, thereby reducing health risk to humans

  20. Importance of floodplain connectivity to fish populations in the Apalachicola River, Florida

    Science.gov (United States)

    Burgess, O.T.; Pine, William E.; Walsh, S.J.

    2013-01-01

    Floodplain habitats provide critical spawning and rearing habitats for many large-river fishes. The paradigm that floodplains are essential habitats is often a key reason for restoring altered rivers to natural flow regimes. However, few studies have documented spatial and temporal utilization of floodplain habitats by adult fish of sport or commercial management interest or assessed obligatory access to floodplain habitats for species' persistence. In this study, we applied telemetry techniques to examine adult fish movements between floodplain and mainstem habitats, paired with intensive light trap sampling of larval fish in these same habitats, to assess the relationships between riverine flows and fish movement and spawning patterns in restored and unmodified floodplain distributaries of the Apalachicola River, Florida. Our intent is to inform resource managers on the relationships between the timing, magnitude and duration of flow events and fish spawning as part of river management actions. Our results demonstrate spawning by all study species in floodplain and mainstem river habitat types, apparent migratory movements of some species between these habitats, and distinct spawning events for each study species on the basis of fish movement patterns and light trap catches. Additionally, Micropterus spp., Lepomis spp. and, to a lesser degree, Minytrema melanops used floodplain channel habitat that was experimentally reconnected to the mainstem within a few weeks of completing the restoration. This result is of interest to managers assessing restoration activities to reconnect these habitats as part of riverine restoration programmes globally.

  1. The Bifurcation and Control of a Single-Species Fish Population Logistic Model with the Invasion of Alien Species

    OpenAIRE

    Zhang, Yi; Zhang, Qiaoling; Li, Jinghao; Zhang, Qingling

    2014-01-01

    The objective of this paper is to study systematically the bifurcation and control of a single-species fish population logistic model with the invasion of alien species based on the theory of singular system and bifurcation. It regards Spartina anglica as an invasive species, which invades the fisheries and aquaculture. Firstly, the stabilities of equilibria in this model are discussed. Moreover, the sufficient conditions for existence of the trans-critical bifurcation and the singularity ind...

  2. Self-recruitment in a coral reef fish population in a marine reserve

    KAUST Repository

    Herrera Sarrias, Marcela

    2014-12-01

    Marine protected areas (MPAs) have proliferated in the past decades to protect biodiversity and sustain fisheries. However, most of the MPA networks have been designed without taking into account a critical factor: the larval dispersal patterns of populations within and outside the reserves. The scale and predictability of larval dispersal, however, remain unknown due to the difficulty of measuring dispersal when larvae are minute (~ cm) compared to the potential scale of dispersal (~ km). Nevertheless, genetic approaches can now be used to make estimates of larval dispersal. The following thesis describes self-recruitment and connectivity patterns of a coral reef fish species (Centropyge bicolor) in Kimbe Bay, Papua New Guinea. To do this, microsatellite markers were developed to evaluate fine-scale genetics and recruit assignment via genetic parentage analysis. In this method, offspring are assigned to potential parents, so that larval dispersal distances can then be inferred for each individual larvae. From a total of 255 adults and 426 juveniles collected only 2 parentoffspring pairs were assigned, representing less than 1% self-recruitment. Previous data from the same study system showed that both Chaetodon vagagundus and Amphiprion percula have consistent high self-recuitment rates (~ 60%), despite having contrasting life history traits. Since C. bicolor and C. vagabundus have similar characteristics (e.g. reproductive mode, pelagic larval duration), comparable results were expected. On the contrary, the results of this study showed that dispersal patterns cannot be generalized across species. Hence the importance of studying different species and seascapes to better understand the patterns of larval dispersal. This, in turn, will be essential to improve the design and implementation of MPAs as conservation and management tools.

  3. Population connectivity among geographic variants within the Lutjanidae (Pisces of the Mexican Pacific coast through fish scale shape recognition

    Directory of Open Access Journals (Sweden)

    Ana L. Ibáñez

    2012-11-01

    Full Text Available Fish scale shape was used to identify geographic variants among Lutjanidae (Lutjanus argentiventris, L. guttatus and L. peru. Specimens were collected from three different geographic areas, north to south of the tropical Pacific coast of Mexico: Puerto Vallarta (PV, Manzanillo (MA and Caleta de Campos (CC. Configuration of landmark coordinates of fish scales were scaled, translated and rotated using generalized procrustes analysis, followed by principal components analysis of resulting shape coordinates. Principal component scores were submitted to cross-validated discriminant analysis to determine the efficacy of scale landmarks for discrimination by geographic variants. This was done with shape and form (shape plus size. PV and MA were recognized as one population different from the CC sampling area. Using only shape (without size, identification rates predicted geographic variant membership much better than chance (91.3%, 70.6% and 85.4% for L. argentiventris, L. guttatus and L. peru, respectively, and taking size into account, classification is somewhat improved (90.6%, 80.1% and 87.5% for L. argentiventris, L. guttatus and L. peru, respectively. Consistency of the two populations for the three species shows non-fortuitous events. Population discrimination confirmed previous genetic studies that show a zoogeographic barrier between the North Equatorial Current and the California Current. The method is non-destructive, fast and less expensive than genetic analysis, thus allowing screening of many individuals for traceability of fish.

  4. Population snapshot of Streptococcus pneumoniae causing invasive disease in South Africa prior to introduction of pneumococcal conjugate vaccines.

    Directory of Open Access Journals (Sweden)

    Kedibone M Ndlangisa

    Full Text Available We determined the sequence types of isolates that caused invasive pneumococcal disease (IPD prior to routine use of pneumococcal conjugate vaccines (PCV in South Africa. PCV-13 serotypes and 6C isolates collected in 2007 (1 461/2 437, 60% from patients of all ages as part of on-going, national, laboratory-based surveillance for IPD, were selected for genetic characterization. In addition, all 134 non-PCV isolates from children <2 years were selected for characterization. Sequence type diversity by serotype and age category (children <5 years vs. individuals ≥5 years was assessed for PCV serotypes using Simpson's index of diversity. Similar genotypes circulated among isolates from children and adults and the majority of serotypes were heterogeneous. While globally disseminated clones were common among some serotypes (e.g., serotype 1 [clonal complex (CC 217, 98% of all serotype 1] and 14 [CC230, 43%], some were represented mainly by clonal complexes rarely reported elsewhere (e.g., serotype 3 [CC458, 60%] and 19A [CC2062, 83%]. In children <2 years, serotype 15B and 8 were the most common serotypes among non-PCV isolates (16% [22/134] and 15% [20/134] isolates, respectively. Sequence type 7052 and 53 were most common among serotypes 15B and 8 isolates and accounted for 58% (7/12 and 64% (9/14 of the isolates, respectively. Serotype 19F, 14, 19A and 15B had the highest proportions of penicillin non-susceptible isolates. Genotypes rarely reported in other parts of the world but common among some of our serotypes highlight the importance of our data as these genotypes may emerge post PCV introduction.

  5. Characterization of reef fish populations within St. Thomas East End Reserve (STEER), USVI

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — NCCOS' Center for Coastal Monitoring and Assessment (CCMA) is working closely with a number of divisions in the USVI DPNR (e.g., Divisions of Fish and Wildlife and...

  6. Reduced Spill at Hydropower Dams: Opportunities for More Generation and Increased Fish Population

    Energy Technology Data Exchange (ETDEWEB)

    Coutant, Charles C [ORNL; Mann, Roger [RMecon, Davis, California; Sale, Michael J [ORNL

    2006-09-01

    This report indicates that reduction of managed spill at hydropower dams can speed implementation of technologies for fish protection and achieve economic goals. Spill of water over spillways is managed in the Columbia River basin to assist downstream-migrating juvenile salmon, and is generally believed to be the most similar to natural migration, benign and effective passage route; other routes include turbines, intake screens with bypasses, and surface bypasses. However, this belief may be misguided, because spill is becoming recognized as less than natural, with deep intakes below normal migration depths, and likely causing physical damages from severe shear on spillways, high turbulence in tail waters, and collisions with baffle blocks that lead to disorientation and predation. Some spillways induce mortalities comparable to turbines. Spill is expensive in lost generation, and controversial. Fish-passage research is leading to more fish-friendly turbines, screens and bypasses that are more effective and less damaging, and surface bypasses that offer passage of more fish per unit water volume than does spill (leaving more water for generation). Analyses by independent economists demonstrated that goals of increased fish survival over the long term and net gain to the economy can be obtained by selectively reducing spill and diverting some of the income from added power generation to research, development, and installation of fish-passage technologies. Such a plan would selectively reduce spill when and where least damaging to fish, increase electricity generation using the water not spilled and use innovative financing to direct monetary gains to improving fish passage.

  7. Population Aspects of Fishes in Geba and Sor Rivers, White Nile System in Ethiopia, East Africa

    Directory of Open Access Journals (Sweden)

    Simagegnew Melaku

    2017-01-01

    Full Text Available This study was carried out to assess the diversity, condition factor, length-weight relationship, and sex ratio of fishes in Geba and Sor Rivers located in Baro-Akobo Basin, White Nile system within Ethiopia. Fish samples were collected in one wet and one dry season. The length-weight relationships were fitted using power equation for the most abundant species. A total of 348 fish specimens were collected using gillnets and hooks. These were identified into eight species and one Garra sp. representing seven genera and four families. Family Cyprinidae was the most dominant with six species (66.7%. Labeobarbus intermedius, Labeobarbus nedgia, and Labeo cylindricus were the most abundant fish species, respectively, with 60.72%, 16.83%, and 14.66% index of relative importance (IRI. The diversity index was higher for Geba River (H′ = 1.50 than for Sor River (H′ = 1.10. All the three most abundant species had negative allometric growth. Seasonal variations in the mean Fulton condition factor (FCF were statistically significant for L. cylindricus (p<0.05. There was variation in the sex ratio with the females dominating in all the three most abundant species. Further investigation into the fish diversity, food, feeding, and reproductive behaviors of fish species especially in the tributaries of these rivers and their socioeconomic aspects is recommended.

  8. Effect and consequences of the reactor-accident in Chernobyl on the fish population in Bavaria

    Energy Technology Data Exchange (ETDEWEB)

    Luensmann, Wulf [Bayerische Landesanstalt fuer Wasserforschung, Munich (Germany)

    1986-07-01

    After the reactor-accident in Chernobyl radioactive fission products reached during the night on April 30, 1986, the south Bavarian region. They were washed out by heavy rains in the early hours of the afternoon, causing a contamination of the total biosphere. It is known from radio-ecological studies, that radionuclides concentrate in fish meat. Ionising radiation may lead to an internal radiation exposition of human beings via food chains. It was for that reason necessary to follow up the temporal development in order to prevent injuries through ionising radiation. The Bavarian Institute for Water Research started on May 5, a project in connection with fish consumption and investigated fish meat for radioactivity, originated from 3 different biotopes: a) rivers b) fish-farms c) lakes in the prealpine region. Altogether approximately 700 fishes were examined until the end of October. Fish-meat contained until the middle of May besides Cs134 and Cs137 also the short-living radionuclides J131 and Te132 (20-30 Bq/kg fresh meat). After that date could only Cs134 and Cs137 be demonstrated. Since both cesium-isotopes in the Chernobyl-fallout occur in a 1:2 ratio, only the result of Cs137 are reported.

  9. Effect and consequences of the reactor-accident in Chernobyl on the fish population in Bavaria

    International Nuclear Information System (INIS)

    Luensmann, Wulf

    1986-01-01

    After the reactor-accident in Chernobyl radioactive fission products reached during the night on April 30, 1986, the south Bavarian region. They were washed out by heavy rains in the early hours of the afternoon, causing a contamination of the total biosphere. It is known from radio-ecological studies, that radionuclides concentrate in fish meat. Ionising radiation may lead to an internal radiation exposition of human beings via food chains. It was for that reason necessary to follow up the temporal development in order to prevent injuries through ionising radiation. The Bavarian Institute for Water Research started on May 5, a project in connection with fish consumption and investigated fish meat for radioactivity, originated from 3 different biotopes: a) rivers b) fish-farms c) lakes in the prealpine region. Altogether approximately 700 fishes were examined until the end of October. Fish-meat contained until the middle of May besides Cs134 and Cs137 also the short-living radionuclides J131 and Te132 (20-30 Bq/kg fresh meat). After that date could only Cs134 and Cs137 be demonstrated. Since both cesium-isotopes in the Chernobyl-fallout occur in a 1:2 ratio, only the result of Cs137 are reported

  10. Population Variation in the Life History of a Land Fish, Alticus arnoldorum, and the Effects of Predation and Density.

    Directory of Open Access Journals (Sweden)

    Edward R M Platt

    Full Text Available Life history variation can often reflect differences in age-specific mortality within populations, with the general expectation that reproduction should be shifted away from ages experiencing increased mortality. Investigators of life history in vertebrates frequently focus on the impact of predation, but there is increasing evidence that predation may have unexpected impacts on population density that in turn prompt unexpected changes in life history. There are also other reasons why density might impact life history independently of predation or mortality more generally. We investigated the consequences of predation and density on life history variation among populations of the Pacific leaping blenny, Alticus arnoldorum. This fish from the island of Guam spends its adult life out of the water on rocks in the splash zone, where it is vulnerable to predation and can be expected to be sensitive to changes in population density that impact resource availability. We found populations invested more in reproduction as predation decreased, while growth rate varied primarily in response to population density. These differences in life history among populations are likely plastic given the extensive gene flow among populations revealed by a previous study. The influence of predation and density on life history was unlikely to have operated independently of each other, with predation rate tending to be associated with reduced population densities. Taken together, our results suggest predation and density can have complex influences on life history, and that plastic life history traits could allow populations to persist in new or rapidly changing environments.

  11. Geometric and morphometric analysis of fish scales to identity genera, species and populations case study: the Cyprinid family

    Directory of Open Access Journals (Sweden)

    Seyedeh Narjes Tabatabei

    2014-01-01

    Full Text Available Using fish scale to identity species and population is a rapid, safe and low cost method. Hence, this study was carried out to investigate the possibility of using geometric and morphometric methods in fish scales for rapid identification of species and populations and compare the efficiency of applying few and/or high number of landmark points. For this purpose, scales of one population of Luciobarbus capito, four populations of Alburnoides eichwaldii and two populations of Rutilus frisii kutum, all belonging to cyprinid family, were examined. On two-dimensional images of the scales 7 and 23 landmark points were digitized in two separate times using TpsDig2, respectively. Landmark data after generalized procrustes analysis were analyzed using Principal Component Analysis (PCA, Canonical Variate Analysis (CVA and Cluster Analysis. The results of both methods (using 7 and 23 landmark points showed significant differences of the shape of scales among the three species studied (P0.05. The results also showed that few number of landmarks could display the differences between scale shapes. According to the results of this study, it could be stated that the scale of each species had unique shape patterns which could be utilized as a species identification key.

  12. The dynamics of fish populations in the Palancar stream,a small tributary of the river Guadalquivir, Spain

    Science.gov (United States)

    Bravo, Ramón; Soriguer, Mila C.; Villar, Noelia; Hernando, José A.

    2001-02-01

    The relationship between flooding and changes in the size distribution of fish populations in the Palancar stream confirms observations in other rivers. On average, density decreased by 36.2 % and biomass increased by 14.5 %, passing from a period of severe drought to one of heavier than normal rains. Precipitation is the most important of the many factors affecting the populations of the Palancar stream; the most evident changes all occurred after the drought. During the drought period, the marked seasonal fluctuation in flow was the most important factor regulating the population dynamics. Fish density and biomass varied in proportion to the water volume. During the rainy period, the studied section of the river was found to be an important reproduction and nursery area, with juveniles and individuals of reproduction age dominating. The presence of Micropterus salmoides, an introduced piscivorous species, is another factor affecting the population dynamics in the Palancar stream. The observed absence of age 0+ individuals of the dominant populations is considered a direct effect of predation.

  13. The Impacts of Recently Established Fish Populations on Zooplankton Communities in a Desert Spring, and Potential Conflicts in Setting Conservation Goals

    Directory of Open Access Journals (Sweden)

    Sujan M. Henkanaththegedara

    2015-01-01

    Full Text Available Desert springs, which harbor diverse and endemic invertebrate assemblages, are often used as refuge habitats for protected fish species. Additionally, many of these springs have been colonized by invasive fish species. However, the potential impacts of recently established fish populations on invertebrate communities in desert springs have been relatively unexplored. We conducted a mesocosm experiment to assess the impact of both protected and invasive fish on community structure of spring-dwelling invertebrates focusing on zooplankton. Experimental populations of spring zooplankton communities were established and randomly assigned to one of three treatments, (1 invasive western mosquitofish (Gambusia affinis; (2 endangered Mohave tui chub (Siphateles bicolor mohavensis; and (3 fishless control. Final populations of zooplankton and fish were sampled, sorted, identified and counted. The treatment differences of zooplankton communities were analyzed by comparing the densities of six major zooplankton taxa. Further, we performed nonmetric multidimensional scaling (NMDS to visualize the patterns of zooplankton community assemblages. Four zooplankton taxa, crustacean nauplii, cladocera, calanoid and cyclopoid copepods had significantly lower densities in fish treatments compared to fishless control. Overall, invasive mosquitofish caused a 78.8% reduction in zooplankton density, while Mohave tui chub caused a 65.1% reduction. Both protected and invasive fish had similar effects on zooplankton except for cladocerans where tui chub caused a 60% reduction in density, whereas mosquitofish virtually eliminated cladocerans. The presence of fish also had a significant effect on zooplankton community structure due to population declines and local extirpations presumably due to fish predation. This work shows that conservation-translocations undertaken to conserve protected fish species may impact spring-dwelling invertebrate communities, and such impacts are

  14. Variation in Rapa Nui (Easter Island) land use indicates production and population peaks prior to European contact.

    Science.gov (United States)

    Stevenson, Christopher M; Puleston, Cedric O; Vitousek, Peter M; Chadwick, Oliver A; Haoa, Sonia; Ladefoged, Thegn N

    2015-01-27

    Many researchers believe that prehistoric Rapa Nui society collapsed because of centuries of unchecked population growth within a fragile environment. Recently, the notion of societal collapse has been questioned with the suggestion that extreme societal and demographic change occurred only after European contact in AD 1722. Establishing the veracity of demographic dynamics has been hindered by the lack of empirical evidence and the inability to establish a precise chronological framework. We use chronometric dates from hydrated obsidian artifacts recovered from habitation sites in regional study areas to evaluate regional land-use within Rapa Nui. The analysis suggests region-specific dynamics including precontact land use decline in some near-coastal and upland areas and postcontact increases and subsequent declines in other coastal locations. These temporal land-use patterns correlate with rainfall variation and soil quality, with poorer environmental locations declining earlier. This analysis confirms that the intensity of land use decreased substantially in some areas of the island before European contact.

  15. Genetic population structure of European sprat (Sprattus sprattus L.): differentiation across a steep environmental gradient in a small pelagic fish

    DEFF Research Database (Denmark)

    Limborg, Morten; Pedersen, Jes S.; Hansen, Jakob Hemmer

    2009-01-01

    locations in and around the North- and Baltic Sea area and from a geographically distant population from the Adriatic Sea. Analyses of nine microsatellite loci revealed a sharp genetic division separating samples from the Northeastern Atlantic and the Baltic Sea (pairwise θ = 0.019–0.035), concurring...... with a steep salinity gradient. We found, at most, weak structure among samples within the Northeastern Atlantic region and within the Baltic Sea (pairwise θ = 0.001–0.009). The Adriatic Sea population was highly differentiated from all northern samples (pairwise θ = 0.071–0.092). Overall, the observed...... population structure resembles that of most other marine fishes studied in the North/Baltic Sea areas. Nevertheless, spatially explicit differences are observed among species, likely reflecting specific life-histories. Such fine-scale population structure should be taken into account, e.g. in ecosystem...

  16. Argument supporting the reality of compensation in fish populations and a plea to let them exercise it

    International Nuclear Information System (INIS)

    McFadden, J.T.

    1977-01-01

    Approaching population processes of fish from the perspective of compensation one envisions an established population as one in which survival or reproduction (or both) have been vastly suppressed for the reason that the population has become large. The natural factors that operate to suppress the biotic potential are many and are complexly intertwined, including availability of food, predators, disease, and physical factors such as temperature. Many of them have greater suppressive effect when the population is large than when it is small. If some new effect that kills off part of the population is introduced, it reduces the suppressive effect of many factors in the population's environment. As a consequence, survival rate or reproductive rate becomes higher and the population compensates in part for the reduction in size. When something causes a population to either increase or decrease in size, there is a tendency for eventual return to average size when the perturbation is removed. Populations do not usually become extinct or increase to infinity, but maintain the balance of nature

  17. Serosurvey Reveals Exposure to West Nile Virus in Asymptomatic Horse Populations in Central Spain Prior to Recent Disease Foci.

    Science.gov (United States)

    Abad-Cobo, A; Llorente, F; Barbero, M Del Carmen; Cruz-López, F; Forés, P; Jiménez-Clavero, M Á

    2017-10-01

    West Nile fever/encephalitis (WNF) is an infectious disease affecting horses, birds and humans, with a cycle involving birds as natural reservoirs and mosquitoes as transmission vectors. It is a notifiable disease, re-emerging in Europe. In Spain, it first appeared in horses in the south (Andalusia) in 2010, where outbreaks occur every year since. However, in 2014, an outbreak was declared in horses in central Spain, approximately 200 km away from the closest foci in Andalusia. Before that, evidence of West Nile virus (WNV) circulation in central Spain had been obtained only from wildlife, but never in horses. The purpose of this work was to perform a serosurvey to retrospectively detect West Nile virus infections in asymptomatic horses in central Spain from 2011 to 2013, that is before the occurrence of the first outbreaks in the area. For that, serum samples from 369 horses, collected between September 2011 and November 2013 in central Spain, were analysed by ELISA (blocking and IgM) and confirmed by virus neutralization, proving its specificity using parallel titration with another flavivirus (Usutu virus). As a result, 10 of 369 horse serum samples analysed gave positive results by competitive ELISA, 5 of which were confirmed as positive to WNV by virus neutralization (seropositivity rate: 1.35%). One of these WNV seropositive samples was IgM-positive. Chronologically, the first positive samples, including the IgM-positive, corresponded to sera collected in 2012 in Madrid province. From these results, we concluded that WNV circulated in asymptomatic equine populations of central Spain at least since 2012, before the first disease outbreak reported in this area. © 2016 Blackwell Verlag GmbH.

  18. Source Array Support for Continuous Monitoring of Fish Population and Behavior by Instantaneous Continental-Shelf-Scale Imaging Using Ocean-Waveguide Acoustics

    National Research Council Canada - National Science Library

    Rynne, Ed; Gillette, David

    2006-01-01

    ...) Multistatic ASW Capability Enhancement Program (MACE) as the source of underwater sounds to support active bi-static sonar capabilities for monitoring fish populations and behaviors during a September/October 2006 sea test off the coast of Maine...

  19. Mercury exposure in a high fish eating Bolivian Amazonian population with intense small-scale gold-mining activities.

    Science.gov (United States)

    Barbieri, Flavia Laura; Cournil, Amandine; Gardon, Jacques

    2009-08-01

    Methylmercury exposure in Amazonian communities through fish consumption has been widely documented in Brazil. There is still a lack of data in other Amazonian countries, which is why we conducted this study in the Bolivian Amazon basin. Simple random sampling was used from a small village located in the lower Beni River, where there is intense gold mining and high fish consumption. All participants were interviewed and hair samples were taken to measure total mercury concentrations. The hair mercury geometric mean in the general population was 3.02 microg/g (CI: 2.69-3.37; range: 0.42-15.65). Age and gender were not directly associated with mercury levels. Fish consumption showed a positive relation and so did occupation, especially small-scale gold mining. Hair mercury levels were lower than those found in Brazilian studies, but still higher than in non-exposed populations. It is necessary to assess mercury exposure in the Amazonian regions where data is still lacking, using a standardized indicator.

  20. Apportioning bacterial carbon source utilization in soil using 14 C isotope analysis of FISH-targeted bacterial populations sorted by fluorescence activated cell sorting (FACS): 14 C-FISH-FACS.

    Science.gov (United States)

    Gougoulias, Christos; Meade, Andrew; Shaw, Liz J

    2018-02-19

    An unresolved need in microbial ecology is methodology to enable quantitative analysis of in situ microbial substrate carbon use at the population level. Here, we evaluated if a novel combination of radiocarbon-labelled substrate tracing, fluorescence in situ hybridisation (FISH) and fluorescence-activated cell sorting (FACS) to sort the FISH-targeted population for quantification of incorporated radioactivity ( 14 C-FISH-FACS) can address this need. Our test scenario used FISH probe PSE1284 targeting Pseudomonas spp. (and some Burkholderia spp.) and salicylic acid added to rhizosphere soil. We examined salicylic acid- 14 C fate (mineralized, cell-incorporated, extractable and non-extractable) and mass balance (0-24 h) and show that the PSE1284 population captured ∼ 50% of the Nycodenz extracted biomass 14 C. Analysis of the taxonomic distribution of the salicylic acid biodegradation trait suggested that PSE1284 population success was not due to conservation of this trait but due to competitiveness for the added carbon. Adding 50KBq of 14 C sample -1 enabled detection of 14 C in the sorted population at ∼ 60-600 times background; a sensitivity which demonstrates potential extension to analysis of rarer/less active populations. Given its sensitivity and compatibility with obtaining a C mass balance, 14 C-FISH-FACS allows quantitative dissection of C flow within the microbial biomass that has hitherto not been achieved. © 2018 Society for Applied Microbiology and John Wiley & Sons Ltd.

  1. Macrodissection prior to closed system RT-qPCR is not necessary for estrogen receptor and HER2 concordance with IHC/FISH in breast cancer.

    Science.gov (United States)

    Gupta, Swati; Mani, Navin R; Carvajal-Hausdorf, Daniel E; Bossuyt, Veerle; Ho, Kenneth; Weidler, Jodi; Wong, Wendy; Rhees, Brian; Bates, Michael; Rimm, David L

    2018-06-01

    An on-demand, closed RT-qPCR, the GeneXpert (GX) system, has the potential to provide biomarker information in low-resourced settings and elsewhere. We used this system with a research use only version of the Breast Cancer STRAT4 cartridge that measures the mRNA expression levels of ERBB2, ESR1, PGR, and MKi67. Here we evaluated the impact of non-macrodissected (non m-d) versus macrodissected (m-d) samples using STRAT4 on formalin-fixed, paraffin-embedded (FFPE) core needle biopsies. Two cohorts were assessed: (1) 60 FFPE infiltrating ductal carcinoma (IDCA) cases and (2) 20 FFPE IDCA cases with ductal carcinoma in situ (DCIS) with a range of HER2 expression as determined by clinical immunohistochemistry and fluorescence in situ hybridization (IHC/FISH). We observed about half of the core needle biopsy area as invasive tumor in both IDCA (mean = 51.5%) and IDCA with DCIS (mean = 53.5%) cohorts, but also found the mRNA levels were independent of tumor area. We found excellent agreement of the mRNA transcript level between the paired samples, m-d versus non m-d, for ERBB2, ESR1, PGR, and MKi67 for both the IDCA and IDCA with DCIS cohorts. No significant difference (P > 0.99) was observed when we compared the mRNA transcript level between the paired samples m-d versus non m-d. In addition, we noted a significant concordance (P < 0.001) between RT-qPCR and IHC/FISH for HER2-positivity, ER-positivity, and PR-positivity, independent of specimen dissection. These data suggest that mRNA expression for ERBB2, ESR, and PGR is sufficiently low in surrounding tissue cells such that macrodissection is not required for assessment of key breast cancer mRNA markers and is independent of the amount of input tumor. This approach may be valuable in settings lacking pathology expertise or using specimen types, such as fine-needle aspirates, where it may be challenging to separate non-tumor from tumor tissue.

  2. Linking temporal changes in the demographic structure and individual growth to the decline in the population of a tropical fish

    Science.gov (United States)

    Sirot, Charlotte; Darnaude, Audrey M.; Guilhaumon, François; Ramos-Miranda, Julia; Flores-Hernandez, Domingo; Panfili, Jacques

    2015-11-01

    The exceptional biodiversity and productivity of tropical coastal lagoons can only be preserved by identifying the causes for the decline in the populations living in these vulnerable ecosystems. The Terminos lagoon in Mexico provided an opportunity for studying this issue as some of its fish populations, in particular the Silver Perch (Bairdiella chrysoura), have declined significantly since the 1980s. Fish sampling campaigns carried out over the whole lagoon area in 1979-81 and again in 2006-2011 revealed the mechanisms which may have been responsible for this decline. Based on biometrical data for 295 juveniles and adults from the two periods and on somatic growth derived from 173 otoliths, a study of the temporal changes in the demographic structure and life history traits (individual growth and body condition) made it possible to distinguish the causes of the decline in the B. chrysoura population. Growth models for the lagoon in 1980-1981 and 2006-2011 showed no significant change in the growth parameters of the population over the last 30 years with a logistic model giving an accurate estimate (R2 = 0.66) of the size-at-age for both periods. The decline in the B. chrysoura population could not be explained by an overall decrease in individual size and condition in the lagoon, the average standard length (SL) and Fulton index (FI) having increased slightly since 1980-1981 (4.6 mm and 0.02 for juveniles and 5.42 mm and 0.07 for adults). However, the size structure of the population in the lagoon has changed, with a significant shift in the size distribution of juveniles with a marked reduction in the proportion of juveniles ≤ 60 mm in the captures (90.9% fewer than in 1980-1981). As the otolith growth rate of fish during the first 4 months also decreased significantly between the two sampling periods (-15%), it is suggested that the main reason for the decline in the abundance and biomass of B. chrysoura within this system may be that its habitats are less

  3. Novel mobbing strategies of a fish population against a sessile annelid predator.

    Science.gov (United States)

    Lachat, Jose; Haag-Wackernagel, Daniel

    2016-09-12

    When searching for food, foraging fishes expose themselves to hidden predators. The strategies that maximize the survival of foraging fishes are not well understood. Here, we describe a novel type of mobbing behaviour displayed by foraging Scolopsis affinis. The fish direct sharp water jets towards the hidden sessile annelid predator Eunice aphroditois (Bobbit worm). We recognized two different behavioural roles for mobbers (i.e., initiator and subsequent participants). The first individual to exhibit behaviour indicating the discovery of the Bobbit directed, absolutely and per time unit, more water jets than the subsequent individuals that joined the mobbing. We found evidence that the mobbing impacted the behaviour of the Bobbit, e.g., by inducing retraction. S. affinis individuals either mob alone or form mobbing groups. We speculate that this behaviour may provide social benefits for its conspecifics by securing foraging territories for S. affinis. Our results reveal a sophisticated and complex behavioural strategy to protect against a hidden predator.

  4. Estimating the size of juvenile fish populations in southeastern coastal-plain estuaries

    International Nuclear Information System (INIS)

    Kjelson, M.A.

    1977-01-01

    Understanding the ecological significance of man's activities upon fishery resources requires information on the size of affected fish stocks. The objective of this paper is to provide information to evaluate and plan sampling programs designed to obtain accurate and precise estimates of fish abundance. Nursery habitats, as marsh--tidal creeks and submerged grass beds, offer the optimal conditions for estimating natural mortality rates for young-of-the-year fish in Atlantic and Gulf of Mexico coast estuaries. The area-density method of abundance estimation using quantitative gears is more feasible than either mark-recapture or direct-count techniques. The blockage method provides the most accurate estimates, while encircling devices enable highly mobile species found in open water to be captured. Drop nets and lift nets allow samples to be taken in obstructed sites, but trawls and seines are the most economical gears. Replicate samples are necessary to improve the precision of density estimates, while evaluation and use of gear-catch efficiencies is feasible and required to improve the accuracy of density estimates. Coefficients of variation for replicate trawl samples range from 50 to 150 percent, while catch efficiencies for both trawls and seines for many juvenile fishes range from approximately 30 to 70 percent

  5. Recent changes in the deep-water fish populations of Lake Michigan

    Science.gov (United States)

    Moffett, James W.

    1957-01-01

    The deep-water fish fauna of Lake Michigan consisted of lake trout (Salvelinus namaycush), burbot (Lota lota maculosa), seven species of chubs or deep-water ciscoes (Leucichthys spp.), and the deep-water sculpin (Myoxocephalus quadricornis). Other species occupied the deep-water zone but were not typically part of the fauna.

  6. Mercury concentrations in lentic fish populations related to ecosystem and watershed characteristics

    Science.gov (United States)

    Andrew L. Rypel

    2010-01-01

    Predicting mercury (Hg) concentrations of fishes at large spatial scales is a fundamental environmental challenge with the potential to improve human health. In this study, mercury concentrations were examined for five species across 161 lakes and ecosystem, and watershed parameters were investigated as explanatory variables in statistical models. For all species, Hg...

  7. Connectivity, persistence, and loss of high abundance areas of a recovering marine fish population in the Northwest Atlantic Ocean.

    Science.gov (United States)

    Boudreau, Stephanie A; Shackell, Nancy L; Carson, Stuart; den Heyer, Cornelia E

    2017-11-01

    In the early 1990s, the Northwest Atlantic Ocean underwent a fisheries-driven ecosystem shift. Today, the iconic cod ( Gadus morhua ) remains at low levels, while Atlantic halibut ( Hippoglossus hippoglossus ) has been increasing since the mid-2000s, concomitant with increasing interest from the fishing industry. Currently, our knowledge about halibut ecology is limited, and the lack of recovery in other collapsed groundfish populations has highlighted the danger of overfishing local concentrations. Here, we apply a Bayesian hierarchical spatiotemporal approach to model the spatial structure of juvenile Atlantic halibut over 36 years and three fisheries management regimes using three model parameters to characterize the resulting spatiotemporal abundance structure: persistence (similarity of spatial structure over time), connectivity (coherence of temporal pattern over space), and spatial variance (variation across the seascape). Two areas of high juvenile abundance persisted through three decades whereas two in the northeast are now diminished, despite the increased abundance and landings throughout the management units. The persistent areas overlap with full and seasonal area closures, which may act as refuges from fishing. Connectivity was estimated to be 250 km, an order of magnitude less than the distance assumed by the definition of the Canadian management units (~2,000 km). The underlying question of whether there are distinct populations within the southern stock unit cannot be answered with this model, but the smaller ~250 km scale of coherent temporal patterns suggests more complex population structure than previously thought, which should be taken into consideration by fishery management.

  8. Relationship between mercury levels in hair and fish consumption in a population living near a hydroelectric tropical dam.

    Science.gov (United States)

    Marrugo-Negrete, José Luis; Ruiz-Guzmán, Javier Alonso; Díez, Sergi

    2013-02-01

    In the present study, total mercury (T-Hg) concentrations were assessed in human hair samples (n = 76) and fish muscle (n = 33) collected at Urrá dam, upstream Sinú river, northwestern Colombia. Based on interviews with study participants, weekly intakes of total mercury (WIT-Hg) and methylmercury (WIMeHg) by fish consumption were also estimated. T-Hg concentrations in hair samples ranged from 0.40 to 24.56 μg/g dw. The highest concentrations were recorded in children (CH) (2-15 years old, n = 24) with significant differences (p < 0.05) with respect to women of childbearing age (WCHA) (16-49 years old, n = 29) and the rest of the population (RP) (n = 23), which were not significantly different. The highest T-Hg concentrations in muscle tissue were recorded in the carnivorous fish (0.65-2.25 μg/g wet weight, ww), with significant differences (p < 0.05) compared to non-carnivorous fish (0.16-0.54 μg/g ww). WIT-Hg recorded the highest values in CH (2.18-50.41 μg/kg/week), with significant differences (p < 0.05) with respect to WCHA (2.02-23.54 μg/kg/week) and RP (1.09-24.71 μg/kg/week), which were not significantly different. Correlation analysis showed a significant relationship between weekly fish consumption and hair T-Hg in CH (r = 0.37, p < 0.05) and WCHA (r = 0.44, p < 0.05). This association was also observed with the number of days per week with fish consumption in CH (r = 0.37, p < 0.05) and WCHA (r = 0.45, p < 0.05). These results suggest that Hg exposure in people inhabiting the Urrá dam should be carefully monitored, particularly in vulnerable groups such as CH and WCHA.

  9. Elucidating dynamic responses of North Pacific fish populations to climatic forcing: Influence of life-history strategy

    Science.gov (United States)

    Yatsu, A.; Aydin, K. Y.; King, J. R.; McFarlane, G. A.; Chiba, S.; Tadokoro, K.; Kaeriyama, M.; Watanabe, Y.

    2008-05-01

    In order to explore mechanistic linkages between low-frequency ocean/climate variability, and fish population responses, we undertook comparative studies of time-series of recruitment-related productivity and the biomass levels of fish stocks representing five life-history strategies in the northern North Pacific between the 1950s and the present. We selected seven species: Japanese sardine ( Sardinopus melanostictus) and California sardine ( Sardinopus sagax) (opportunistic strategists), walleye pollock ( Theragra chalcogramma, intermediate strategist), pink salmon ( Oncorhynchus gorbuscha, salmonic strategist), sablefish ( Anoplopoma fimbria) and Pacific halibut ( Hippoglossus stenolepis) (periodic strategists) and spiny dogfish ( Squalus acanthias, equilibrium strategist). The responses in terms of productivity of sardine, pink salmon, sablefish and halibut to climatic regime shifts were generally immediate, delayed, or no substantial responses depending on the particular regime shift year and fish stock (population). In walleye pollock, there were some periods of high productivity and low productivity, but not coincidental to climatic regime shifts, likely due to indirect climate forcing impacts on both bottom-up and top-down processes. Biomass of zooplankton and all fish stocks examined, except for spiny dogfish whose data were limited, indicated a decadal pattern with the most gradual changes in periodic strategists and most intensive and rapid changes in opportunistic strategists. Responses of sardine productivity to regime shifts were the most intense, probably due to the absence of density-dependent effects and the availability of refuges from predators when sardine biomass was extremely low. Spiny dogfish were least affected by environmental variability. Conversely, spiny dogfish are likely to withstand only modest harvest rates due to their very low intrinsic rate of increase. Thus, each life-history strategy type had a unique response to climatic

  10. Effects of changes in food supply at the time of sex differentiation on the gonadal transcriptome of juvenile fish. Implications for natural and farmed populations.

    Directory of Open Access Journals (Sweden)

    Noelia Díaz

    Full Text Available Food supply is a major factor influencing growth rates in animals. This has important implications for both natural and farmed fish populations, since food restriction may difficult reproduction. However, a study on the effects of food supply on the development of juvenile gonads has never been transcriptionally described in fish.This study investigated the consequences of growth on gonadal transcriptome of European sea bass in: 1 4-month-old sexually undifferentiated fish, comparing the gonads of fish with the highest vs. the lowest growth, to explore a possible link between transcriptome and future sex, and 2 testis from 11-month-old juveniles where growth had been manipulated through changes in food supply. The four groups used were: i sustained fast growth, ii sustained slow growth, iii accelerated growth, iv decelerated growth. The transcriptome of undifferentiated gonads was not drastically affected by initial natural differences in growth. Further, changes in the expression of genes associated with protein turnover were seen, favoring catabolism in slow-growing fish and anabolism in fast-growing fish. Moreover, while fast-growing fish took energy from glucose, as deduced from the pathways affected and the analysis of protein-protein interactions examined, in slow-growing fish lipid metabolism and gluconeogenesis was favored. Interestingly, the highest transcriptomic differences were found when forcing initially fast-growing fish to decelerate their growth, while accelerating growth of initially slow-growing fish resulted in full transcriptomic convergence with sustained fast-growing fish.Food availability during sex differentiation shapes the juvenile testis transcriptome, as evidenced by adaptations to different energy balances. Remarkably, this occurs in absence of major histological changes in the testis. Thus, fish are able to recover transcriptionally their testes if they are provided with enough food supply during sex

  11. Effects of changes in food supply at the time of sex differentiation on the gonadal transcriptome of juvenile fish. Implications for natural and farmed populations.

    Science.gov (United States)

    Díaz, Noelia; Ribas, Laia; Piferrer, Francesc

    2014-01-01

    Food supply is a major factor influencing growth rates in animals. This has important implications for both natural and farmed fish populations, since food restriction may difficult reproduction. However, a study on the effects of food supply on the development of juvenile gonads has never been transcriptionally described in fish. This study investigated the consequences of growth on gonadal transcriptome of European sea bass in: 1) 4-month-old sexually undifferentiated fish, comparing the gonads of fish with the highest vs. the lowest growth, to explore a possible link between transcriptome and future sex, and 2) testis from 11-month-old juveniles where growth had been manipulated through changes in food supply. The four groups used were: i) sustained fast growth, ii) sustained slow growth, iii) accelerated growth, iv) decelerated growth. The transcriptome of undifferentiated gonads was not drastically affected by initial natural differences in growth. Further, changes in the expression of genes associated with protein turnover were seen, favoring catabolism in slow-growing fish and anabolism in fast-growing fish. Moreover, while fast-growing fish took energy from glucose, as deduced from the pathways affected and the analysis of protein-protein interactions examined, in slow-growing fish lipid metabolism and gluconeogenesis was favored. Interestingly, the highest transcriptomic differences were found when forcing initially fast-growing fish to decelerate their growth, while accelerating growth of initially slow-growing fish resulted in full transcriptomic convergence with sustained fast-growing fish. Food availability during sex differentiation shapes the juvenile testis transcriptome, as evidenced by adaptations to different energy balances. Remarkably, this occurs in absence of major histological changes in the testis. Thus, fish are able to recover transcriptionally their testes if they are provided with enough food supply during sex differentiation; however

  12. A prospective monitoring of natural and anthropical fish populations in the basin of the Trotus river

    Directory of Open Access Journals (Sweden)

    URECHE Dorel

    2006-09-01

    Full Text Available As a major part of the Siret river hidrography, though less known ichthyologically, the Trotus has a series of tributaries worth mentioning for their natural sources of water pollution (the Slanic River for sodium chloride, the Tazlau River for potassium chloride and the Tazlaul Sarat for petroleum derivatives as well as for the chemical pollution from the plants in Darmanesti and Onesti. All these in mind the impact of the pollution over the fish fauna of the above mentioned area was determined. The basinal analysis of the ichthyocenosis was performed in three locations the selection of which was based on the particulars of the habitat: upper Trotus free of chemical and urban waste, the Tazlau and middle and downstream Trotus – an area affected by chemical and urban waste upstream Comanesti. A total number of sampling stations was chosen so as to cover all particular fish breeding associations and changes in spreading of the species.

  13. Methylmercury determination in fish and seafood products and estimated daily intake for the Spanish population.

    Science.gov (United States)

    Sahuquillo, I; Lagarda, M J; Silvestre, M D; Farré, R

    2007-08-01

    The mercury content of 25 samples of fish and seafood products most frequently consumed in Spain was determined. A simple method comprising cold vapour and atomic absorption spectrometry was used to determine separately inorganic and organic mercury. In all samples inorganic mercury content was below 50 microg kg(-1). There was wide variability, among not only the mercury levels of different fish species, but also for different samples of the same species - with the methylmercury content ranging from below 54 to 662 microg kg(-1). The highest mean methylmercury content was found in fresh tuna. Based on an average total fish consumption of 363 g/person week(-1), the methylmercury intake was estimated to be 46.2 microg/person week(-1). Therefore, the mercury intake of Spanish people with a body weight Food Additives (JECFA) provisional tolerable weekly intake (PTWI) of 1.6 microg kg(-1) body weight, but exceeds the US National Research Council (NRC) limit of 0.7 microg kg(-1) body weight week(-1) based on a benchmark dose.

  14. Increased extinction potential of insular fish populations with reduced life history variation and low genetic diversity.

    Science.gov (United States)

    Hellmair, Michael; Kinziger, Andrew P

    2014-01-01

    Theoretical work has shown that reduced phenotypic heterogeneity leads to population instability and can increase extinction potential, yet few examples exist of natural populations that illustrate how varying levels expressed diversity may influence population persistence, particularly during periods of stochastic environmental fluctuation. In this study, we assess levels of expressed variation and genetic diversity among demographically independent populations of tidewater goby (Eucyclogobius newberryi), show that reductions in both factors typically coincide, and describe how low levels of diversity contribute to the extinction risk of these isolated populations. We illustrate that, for this annual species, continuous reproduction is a safeguard against reproductive failure by any one population segment, as natural, stochastically driven salinity increases frequently result in high mortality among juvenile individuals. Several study populations deviated from the natural pattern of year-round reproduction typical for the species, rendering those with severely truncated reproductive periods vulnerable to extinction in the event of environmental fluctuation. In contrast, demographically diverse populations are more likely to persist through such periods through the continuous presence of adults with broader physiological tolerance to abrupt salinity changes. Notably, we found a significant correlation between genetic diversity and demographic variation in the study populations, which could be the result of population stressors that restrict both of these diversity measures simultaneously, or suggestive of a causative relationship between these population characteristics. These findings demonstrate the importance of biocomplexity at the population level, and assert that the maintenance of diversity contributes to population resilience and conservation of this endangered species.

  15. Increased extinction potential of insular fish populations with reduced life history variation and low genetic diversity.

    Directory of Open Access Journals (Sweden)

    Michael Hellmair

    Full Text Available Theoretical work has shown that reduced phenotypic heterogeneity leads to population instability and can increase extinction potential, yet few examples exist of natural populations that illustrate how varying levels expressed diversity may influence population persistence, particularly during periods of stochastic environmental fluctuation. In this study, we assess levels of expressed variation and genetic diversity among demographically independent populations of tidewater goby (Eucyclogobius newberryi, show that reductions in both factors typically coincide, and describe how low levels of diversity contribute to the extinction risk of these isolated populations. We illustrate that, for this annual species, continuous reproduction is a safeguard against reproductive failure by any one population segment, as natural, stochastically driven salinity increases frequently result in high mortality among juvenile individuals. Several study populations deviated from the natural pattern of year-round reproduction typical for the species, rendering those with severely truncated reproductive periods vulnerable to extinction in the event of environmental fluctuation. In contrast, demographically diverse populations are more likely to persist through such periods through the continuous presence of adults with broader physiological tolerance to abrupt salinity changes. Notably, we found a significant correlation between genetic diversity and demographic variation in the study populations, which could be the result of population stressors that restrict both of these diversity measures simultaneously, or suggestive of a causative relationship between these population characteristics. These findings demonstrate the importance of biocomplexity at the population level, and assert that the maintenance of diversity contributes to population resilience and conservation of this endangered species.

  16. A fully-stochasticized, age-structured population model for population viability analysis of fish: Lower Missouri River endangered pallid sturgeon example

    Science.gov (United States)

    Wildhaber, Mark L.; Albers, Janice; Green, Nicholas; Moran, Edward H.

    2017-01-01

    We develop a fully-stochasticized, age-structured population model suitable for population viability analysis (PVA) of fish and demonstrate its use with the endangered pallid sturgeon (Scaphirhynchus albus) of the Lower Missouri River as an example. The model incorporates three levels of variance: parameter variance (uncertainty about the value of a parameter itself) applied at the iteration level, temporal variance (uncertainty caused by random environmental fluctuations over time) applied at the time-step level, and implicit individual variance (uncertainty caused by differences between individuals) applied within the time-step level. We found that population dynamics were most sensitive to survival rates, particularly age-2+ survival, and to fecundity-at-length. The inclusion of variance (unpartitioned or partitioned), stocking, or both generally decreased the influence of individual parameters on population growth rate. The partitioning of variance into parameter and temporal components had a strong influence on the importance of individual parameters, uncertainty of model predictions, and quasiextinction risk (i.e., pallid sturgeon population size falling below 50 age-1+ individuals). Our findings show that appropriately applying variance in PVA is important when evaluating the relative importance of parameters, and reinforce the need for better and more precise estimates of crucial life-history parameters for pallid sturgeon.

  17. Fish Rhabdoviruses

    Science.gov (United States)

    Kurath, G.; Winton, J.

    2008-01-01

    Many important viral pathogens of fish are members of the family Rhabdoviridae. The viruses in this large group cause significant losses in populations of wild fish as well as among fish reared in aquaculture. Fish rhabdoviruses often have a wide host and geographic range, and infect aquatic animals in both freshwater and seawater. The fish rhabdoviruses comprise a diverse collection of isolates that can be placed in one of two quite different groups: isolates that are members of the established genusNovirhabdovirus, and those that are most similar to members of the genus Vesiculovirus. Because the diseases caused by fish rhabdoviruses are important to aquaculture, diagnostic methods for their detection and identification are well established. In addition to regulations designed to reduce the spread of fish viruses, a significant body of research has addressed methods for the control or prevention of diseases caused by fish rhabdoviruses, including vaccination. The number of reported fish rhabdoviruses continues to grow as a result of the expansion of aquaculture, the increase in global trade, the development of improved diagnostic methods, and heightened surveillance activities. Fish rhabdoviruses serve as useful components of model systems to study vertebrate virus disease, epidemiology, and immunology.

  18. Connectivity between Migrating and Landlocked Populations of a Diadromous fish Species Investigated Using Otolith Microchemistry

    NARCIS (Netherlands)

    Tulp, I.Y.M.; Keller, A.M.; Navez, J.; Winter, H.V.; Graaf, de M.; Baeyens, W.

    2013-01-01

    Smelt Osmerus eperlanus has two different life history strategies in the Netherlands. The migrating population inhabits the Wadden Sea and spawns in freshwater areas. After the closure of the Afsluitdijk in 1932, part of the smelt population became landlocked. The fresh water smelt population has

  19. The Bifurcation and Control of a Single-Species Fish Population Logistic Model with the Invasion of Alien Species

    Directory of Open Access Journals (Sweden)

    Yi Zhang

    2014-01-01

    Full Text Available The objective of this paper is to study systematically the bifurcation and control of a single-species fish population logistic model with the invasion of alien species based on the theory of singular system and bifurcation. It regards Spartina anglica as an invasive species, which invades the fisheries and aquaculture. Firstly, the stabilities of equilibria in this model are discussed. Moreover, the sufficient conditions for existence of the trans-critical bifurcation and the singularity induced bifurcation are obtained. Secondly, the state feedback controller is designed to eliminate the unexpected singularity induced bifurcation by combining harvested effort with the purification capacity. It obviously inhibits the switch of population and makes the system stable. Finally, the numerical simulation is proposed to show the practical significance of the bifurcation and control from the biological point of view.

  20. Impact of black rhinoceros (Diceros bicornis minor) on a local population of Euphorbia bothae in the Great Fish River Reserve, South Africa

    NARCIS (Netherlands)

    Luske, B.L.; Mertens, T.; Lent, P.C.; Boer, de W.F.; Prins, H.H.T.

    2009-01-01

    In the Great Fish River Reserve, South Africa, black rhinoceros (Diceros bicornis minor) feed extensively on a local population of Euphorbia bothae. Maintaining the endangered black rhinoceros and the protected E. bothae population are both conservation priorities of the reserve. Therefore, the

  1. Impacts of golden alga Prymnesium parvum on fish populations in reservoirs of the upper Colorado River and Brazos River basins, Texas

    Science.gov (United States)

    VanLandeghem, Matthew M.; Farooqi, Mukhtar; Farquhar, B.; Patino, Reynaldo

    2013-01-01

    Several reservoirs in the upper Colorado River and Brazos River basins in Texas have experienced toxic blooms of golden alga Prymnesium parvum and associated fish kills since 2001. There is a paucity of information, however, regarding the population-level effects of such kills in large reservoirs, species-specific resistance to or recovery from kills, or potential differences in the patterns of impacts among basins. We used multiple before-after, control-impact analysis to determine whether repeated golden alga blooms have led to declines in the relative abundance and size structure of fish populations. Sustained declines were noted for 9 of 12 fish species surveyed in the upper Colorado River, whereas only one of eight species was impacted by golden alga in the Brazos River. In the upper Colorado River, White Bass Morone chrysops, White Crappie Pomoxis annularis, Largemouth Bass Micropterus salmoides, Bluegill Lepomis macrochirus, River Carpsucker Carpiodes carpio, Freshwater Drum Aplodinotus grunniens, Channel Catfish Ictalurus punctatus, Flathead Catfish Pylodictis olivaris, and Blue Catfish I. furcatus exhibited sustained declines in relative abundance, size structure, or both; Gizzard Shad Dorosoma cepedianum, Longnose Gar Lepisosteus osseus, and Common Carp Cyprinus carpio did not exhibit those declines. In the Brazos River, only the relative abundance of Blue Catfish was impacted. Overall, toxic golden alga blooms can negatively impact fish populations over the long-term, but the patterns of impact can vary considerably among river basins and species. In the Brazos River, populations of most fish species appear to be healthy, suggesting a positive angling outlook for this basin. In the upper Colorado River, fish populations have been severely impacted, and angling opportunities have been reduced. Basin-specific management plans aimed at improving water quality and quantity will likely reduce bloom intensity and allow recovery of fish populations to the

  2. Effects of Changes in Food Supply at the Time of Sex Differentiation on the Gonadal Transcriptome of Juvenile Fish. Implications for Natural and Farmed Populations

    OpenAIRE

    Díaz, Noelia; Ribas, Laia; Piferrer, Francesc

    2014-01-01

    Background: Food supply is a major factor influencing growth rates in animals. This has important implications for both natural and farmed fish populations, since food restriction may difficult reproduction. However, a study on the effects of food supply on the development of juvenile gonads has never been transcriptionally described in fish. Methods and Findings: This study investigated the consequences of growth on gonadal transcriptome of European sea bass in: 1) 4-month-old sexually undif...

  3. Strong population genetic structuring in an annual fish, Nothobranchius furzeri, suggests multiple savannah refugia in southern Mozambique.

    Science.gov (United States)

    Bartáková, Veronika; Reichard, Martin; Janko, Karel; Polačik, Matej; Blažek, Radim; Reichwald, Kathrin; Cellerino, Alessandro; Bryja, Josef

    2013-09-12

    Intraspecific genetic variation of African fauna has been significantly affected by pronounced climatic fluctuations in Plio-Pleistocene, but, with the exception of large mammals, very limited empirical data on diversity of natural populations are available for savanna-dwelling animals. Nothobranchius furzeri is an annual fish from south-eastern Africa, inhabiting discrete temporary savannah pools outside main river alluvia. Their dispersal is limited and population processes affecting its genetic structure are likely a combination of those affecting terrestrial and aquatic taxa. N. furzeri is a model taxon in ageing research and several populations of known geographical origin are used in laboratory studies. Here, we analysed the genetic structure, diversity, historical demography and temporal patterns of divergence in natural populations of N. furzeri across its entire distribution range. Genetic structure and historical demography of N. furzeri were analysed using a combination of mitochondrial (partial cytochrome b sequences, 687 bp) and nuclear (13 microsatellites) markers in 693 fish from 36 populations. Genetic markers consistently demonstrated strong population structuring and suggested two main genetic groups associated with river basins. The split was dated to the Pliocene (>2 Mya). The northern group inhabits savannah pools across the basin of the intermittent river Chefu in south-western Mozambique and eastern Zimbabwe. The southern group (from southernmost Mozambique) is subdivided, with the River Limpopo forming a barrier (maximum divergence time 1 Mya). A strong habitat fragmentation (isolated temporary pools) is reflected in significant genetic structuring even between adjacent pools, with a major influence of genetic drift and significant isolation-by-distance. Analysis of historical demography revealed that the expansion of both groups is ongoing, supported by frequent founder effects in marginal parts of the range and evidence of secondary

  4. The Use of Advanced Hydroelectric Turbines to Improve Water Quality and Fish Populations

    International Nuclear Information System (INIS)

    Brookshier, P.A.; Cada, G.F.; Flynn, J.V.; Rinehart, B.N.; Sale, M.J.; Sommers, G.L.

    1999-01-01

    Hydroelectric power contributes about 10 percent of the electrical energy generated in the United States, and nearly 20 percent of the worlds electrical energy. It is a renewable energy source that can contribute significantly to reduction of greenhouse gases by offsetting conventional carbon-based electricity generation. However, rather than growing in importance, hydroelectric generation has actually declined in recent years, often as a consequence of environmental concerns centering around (1) restriction of upstream and downstream fish passage by the dam, and (2) alteration of water quality and river flows by the impoundment. The Advanced Hydropower Turbine System (AHTS) Program of the U.S. Department of Energy is developing turbine technology which would help to maximize global hydropower resources while minimizing adverse environmental effects. Major technical goals for the Program are (1) the reduction of mortality among turbine-passed fish to 2 percent or less, compared to current levels ranging up to 30 percent or greater; and (2) development of aerating turbines that would ensure that water discharged from reservoirs has a dissolved oxygen concentration of at least 6 mg/L. These advanced, environmentally friendly turbines would be suitable both for new hydropower installations and for retrofitting at existing dams. Several new turbine designs that have been developed in the initial phases of the AHTS program are described

  5. Connectivity between migrating and landlocked populations of a diadromous fish species investigated using otolith microchemistry.

    Directory of Open Access Journals (Sweden)

    Ingrid Tulp

    Full Text Available Smelt Osmerus eperlanus has two different life history strategies in The Netherlands. The migrating population inhabits the Wadden Sea and spawns in freshwater areas. After the closure of the Afsluitdijk in 1932, part of the smelt population became landlocked. The fresh water smelt population has been in severe decline since 1990, and has strongly negatively impacted the numbers of piscivorous water birds relying on smelt as their main prey. The lakes that were formed after the dike closure, IJsselmeer and Markermeer have been assigned as Natura 2000 sites, based on their importance for (among others piscivorous water birds. Because of the declining fresh water smelt population, the question arose whether this population is still supported by the diadromous population. Opportunities for exchange between fresh water and the sea are however limited to discharge sluices. The relationship between the diadromous and landlocked smelt population was analysed by means of otolith microchemistry. Our interpretation of otolith strontium ((88Sr patterns from smelt specimens collected in the fresh water area of Lake IJsselmeer and Markermeer, compared to those collected in the nearby marine environment, is that there is currently no evidence for a substantial contribution from the diadromous population to the spawning stock of the landlocked population.

  6. Wavelet-based resolution recovery using an anatomical prior provides quantitative recovery for human population phantom PET [11C]raclopride data

    International Nuclear Information System (INIS)

    Shidahara, M; Tamura, H; Tsoumpas, C; McGinnity, C J; Hammers, A; Turkheimer, F E; Kato, T; Watabe, H

    2012-01-01

    The objective of this study was to evaluate a resolution recovery (RR) method using a variety of simulated human brain [ 11 C]raclopride positron emission tomography (PET) images. Simulated datasets of 15 numerical human phantoms were processed by a wavelet-based RR method using an anatomical prior. The anatomical prior was in the form of a hybrid segmented atlas, which combined an atlas for anatomical labelling and a PET image for functional labelling of each anatomical structure. We applied RR to both 60 min static and dynamic PET images. Recovery was quantified in 84 regions, comparing the typical ‘true’ value for the simulation, as obtained in normal subjects, simulated and RR PET images. The radioactivity concentration in the white matter, striatum and other cortical regions was successfully recovered for the 60 min static image of all 15 human phantoms; the dependence of the solution on accurate anatomical information was demonstrated by the difficulty of the technique to retrieve the subthalamic nuclei due to mismatch between the two atlases used for data simulation and recovery. Structural and functional synergy for resolution recovery (SFS-RR) improved quantification in the caudate and putamen, the main regions of interest, from −30.1% and −26.2% to −17.6% and −15.1%, respectively, for the 60 min static image and from −51.4% and −38.3% to −27.6% and −20.3% for the binding potential (BP ND ) image, respectively. The proposed methodology proved effective in the RR of small structures from brain [ 11 C]raclopride PET images. The improvement is consistent across the anatomical variability of a simulated population as long as accurate anatomical segmentations are provided. (paper)

  7. Geographic coupling of juvenile and adult habitat shapes spatial population dynamics of a coral reef fish

    NARCIS (Netherlands)

    Huijbers, C.M.; Nagelekerken, I.; Debrot, A.O.; Jongejans, E.

    2013-01-01

    Marine spatial population dynamics are often addressed with a focus on larval dispersal, without taking into account movement behavior of individuals in later life stages. Processes occurring during demersal life stages may also drive spatial population dynamics if habitat quality is perceived

  8. Portfolio theory as a management tool to guide conservation and restoration of multi-stock fish populations

    Science.gov (United States)

    DuFour, Mark R.; May, Cassandra J.; Roseman, Edward F.; Ludsin, Stuart A.; Vandergoot, Christopher S.; Pritt, Jeremy J.; Fraker, Michael E.; Davis, Jeremiah J.; Tyson, Jeffery T.; Miner, Jeffery G.; Marschall, Elizabeth A.; Mayer, Christine M.

    2015-01-01

    Habitat degradation and harvest have upset the natural buffering mechanism (i.e., portfolio effects) of many large-scale multi-stock fisheries by reducing spawning stock diversity that is vital for generating population stability and resilience. The application of portfolio theory offers a means to guide management activities by quantifying the importance of multi-stock dynamics and suggesting conservation and restoration strategies to improve naturally occurring portfolio effects. Our application of portfolio theory to Lake Erie Sander vitreus (walleye), a large population that is supported by riverine and open-lake reef spawning stocks, has shown that portfolio effects generated by annual inter-stock larval fish production are currently suboptimal when compared to potential buffering capacity. Reduced production from riverine stocks has resulted in a single open-lake reef stock dominating larval production, and in turn, high inter-annual recruitment variability during recent years. Our analyses have shown (1) a weak average correlation between annual river and reef larval production (ρ̄ = 0.24), suggesting that a natural buffering capacity exists in the population, and (2) expanded annual production of larvae (potential recruits) from riverine stocks could stabilize the fishery by dampening inter-annual recruitment variation. Ultimately, our results demonstrate how portfolio theory can be used to quantify the importance of spawning stock diversity and guide management on ecologically relevant scales (i.e., spawning stocks) leading to greater stability and resilience of multi-stock populations and fisheries.

  9. Disease associated population effects of commercial fish and shellfish species (ToR g)

    DEFF Research Database (Denmark)

    Lang, T.; Alfjorden, A.; Feist, S.W.

    2015-01-01

    of the combined effects of the pathogen, host and environmental factors. Diseases may be one of several biological and non-biological factors regulating the abundance and composition of stocks or populations of aquatic organisms. Here we review evidence for population effects associated with diseases in wild......Pathogens are increasingly reported from populations of aquatic animals. Variations in the frequency and abundance of pathogens depend on spatial or temporal factors as well as those related to host effects such as age or condition. Similarly, the devel-opment of a disease is a function...... and references to key publications are pro-vided. The overview shows that the effects of diseases may occur at various life stages of affected hosts. The extent to which these effects lead to measurable popula-tion changes (e.g., in growth, reproduction, mortality, recruitment, population de...

  10. Within and between population variation in epidermal club cell investment in a freshwater prey fish: a cautionary tale for evolutionary ecologists.

    Directory of Open Access Journals (Sweden)

    Aditya K Manek

    Full Text Available Many prey fishes possess large club cells in their epidermis. The role of these cells has garnered considerable attention from evolutionary ecologists. These cells likely form part of the innate immune system of fishes, however, they also have an alarm function, releasing chemical cues that serve to warn nearby conspecifics of danger. Experiments aimed at understanding the selection pressures leading to the evolution of these cells have been hampered by a surprisingly large intraspecific variation in epidermal club cell (ECC investment. The goal of our current work was to explore the magnitude and nature of this variation in ECC investment. In a field survey, we documented large differences in ECC investment both within and between several populations of minnows. We then tested whether we could experimentally reduce variation in mean ECC number by raising fish under standard laboratory conditions for 4 weeks. Fish from different populations responded very differently to being held under standard laboratory conditions; some populations showed an increase in ECC investment while others remained unchanged. More importantly, we found some evidence that we could reduce within population variation in ECC investment through time, but could not reduce among-population variation in mean ECC investment. Given the large variation we observed in wild fish and our limited ability to converge mean cell number by holding the fish under standard conditions, we caution that future studies may be hard pressed to find subtle effects of various experimental manipulations; this will make elucidating the selection pressures leading to the evolution of the cells challenging.

  11. Impact of climate change and population growth on a risk assessment for endocrine disruption in fish due to steroid estrogens in England and Wales

    International Nuclear Information System (INIS)

    Keller, V.D.J.; Lloyd, P.; Terry, J.A.; Williams, R.J.

    2015-01-01

    In England and Wales, steroid estrogens: estrone, estradiol and ethinylestradiol have previously been identified as the main chemicals causing endocrine disruption in male fish. A national risk assessment is already available for intersex in fish arising from estrogens under current flow conditions. This study presents, to our knowledge, the first set of national catchment-based risk assessments for steroid estrogen under future scenarios. The river flows and temperatures were perturbed using three climate change scenarios (ranging from relatively dry to wet). The effects of demographic changes on estrogen consumption and human population served by sewage treatment works were also included. Compared to the current situation, the results indicated increased future risk:the percentage of high risk category sites, where endocrine disruption is more likely to occur, increased. These increases were mainly caused by changes in human population. This study provides regulators with valuable information to prepare for this potential increased risk. - Highlights: • Risk assessment for the 2050's including climate change and population changes. • Three climate scenarios considered (changes in river flow and river temperature). • Increased risk from fish intersex across all scenarios in England and Wales. • Population is the main factor causing the risk increase for the 2050's. - The predicted increase in risk of endocrine disruption in fish due to steroid estrogens in England and Wales in the 2050's is mainly due to human population increase rather than climate change

  12. Diverse juvenile life-history behaviours contribute to the spawning stock of an anadromous fish population

    Science.gov (United States)

    Walsworth, Timothy E.; Schindler, Daniel E.; Griffiths, Jennifer R.; Zimmerman, Christian E.

    2015-01-01

    Habitat quality often varies substantially across space and time, producing a shifting mosaic of growth and mortality trade-offs across watersheds. Traditional studies of juvenile habitat use have emphasised the evolution of single optimal strategies that maximise recruitment to adulthood and eventual fitness. However, linking the distribution of individual behaviours that contribute to recruitment at the population level has been elusive, particularly for highly fecund aquatic organisms. We examined juvenile habitat use within a population of sockeye salmon (Oncorhynchus nerka) that spawn in a watershed consisting of two interconnected lakes and a marine lagoon. Otolith microchemical analysis revealed that the productive headwater lake accounted for about half of juvenile growth for those individuals surviving to spawn in a single river in the upper watershed. However, 47% of adults had achieved more than half of their juvenile growth in the downstream less productive lake, and 3% of individuals migrated to the estuarine environment during their first summer and returned to freshwater to overwinter before migrating back to sea. These results describe a diversity of viable habitat-use strategies by juvenile sockeye salmon that may buffer the population against poor conditions in any single rearing environment, reduce density-dependent mortality and have implications for the designation of critical habitat for conservation purposes. A network of accessible alternative habitats providing trade-offs in growth and survival may be important for long-term viability of populations.

  13. The Effect on Selenium Concentrations of a Randomized Intervention with Fish and Mussels in a Population with Relatively Low Habitual Dietary Selenium Intake

    DEFF Research Database (Denmark)

    Outzen, Malene; Tjønneland, Anne; Larsen, Erik Huusfeldt

    2015-01-01

    Selenium status of the Danish population is below that assumed optimal for the suggested protective effects against chronic diseases, including certain cancers. Fish and shellfish are important dietary sources of selenium in Denmark. We investigated the effect of increased fish and mussel intake...... on selenium blood concentrations in a population with relatively low habitual dietary selenium intake. We randomly assigned 102 healthy men and women (all non-smokers) aged 48-76 years to an intervention group (n = 51) or a control group (n = 51). Intervention participants received 1000 g fish and mussels....../week for 26 weeks (similar to 50 mu g selenium/day). Controls received no intervention. Non-fasting blood samples were taken and whole blood selenium was determined using inductively coupled plasma-mass spectrometry (ICP-MS), and plasma selenoprotein P (SelP) was determined by high performance liquid...

  14. Individual-specific transgenerational marking of fish populations based on a barium dual-isotope procedure.

    Science.gov (United States)

    Huelga-Suarez, Gonzalo; Moldovan, Mariella; Garcia-Valiente, America; Garcia-Vazquez, Eva; Alonso, J Ignacio Garcia

    2012-01-03

    The present study focuses on the development and evaluation of an individual-specific transgenerational marking procedure using two enriched barium isotopes, (135)Ba and (137)Ba, mixed at a given and selectable molar ratio. The method is based on the deconvolution of the isotope patterns found in the sample into four molar contribution factors: natural xenon (Xe nat), natural barium (Ba nat), Ba135, and Ba137. The ratio of molar contributions between Ba137 and Ba135 is constant and independent of the contribution of natural barium in the sample. This procedure was tested in brown trout ( Salmo trutta ) kept in captivity. Trout were injected with three different Ba137/Ba135 isotopic signatures ca. 7 months and 7 days before spawning to compare the efficiency of the marking procedure at long and short term, respectively. The barium isotopic profiles were measured in the offspring by means of inductively coupled plasma mass spectrometry. Each of the three different isotopic signatures was unequivocally identified in the offspring in both whole eggs and larvae. For 9 month old offspring, the characteristic barium isotope signatures could also be detected in the otoliths even in the presence of a high and variable amount of barium of natural isotope abundance. In conclusion, it can be stated that the proposed dual-isotope marking is inheritable and can be detected after both long-term and short-term marking. Furthermore, the dual-isotope marking can be made individual-specific, so that it allows identification of offspring from a single individual or a group of individuals within a given fish group. © 2011 American Chemical Society

  15. Adoption Of Improved Fish Technologies Among Fish Farmers In ...

    African Journals Online (AJOL)

    A shortfall exists between fish supply and fish demand in the country despite the introduction of improved technology to fish farmers. This led to huge wage bill on the importation of fish to meet the protein need of the ever increasing population. This prompted this study with focus on adoption of improved fish technologies ...

  16. One Fish, Two Fish, Redfish, You Fish!

    Science.gov (United States)

    White, Katherine; Timmons, Maryellen; Medders, Paul

    2011-01-01

    The recreational fishing activity presented in this article provides a hands-on, problem-based experience for students; it unites biology, math, economics, environmental policy, and population dynamics concepts. In addition, the activity allows students to shape environmental policy in a realistic setting and evaluate their peers' work. By…

  17. Ecological dynamics of age selective harvesting of fish population: Maximum sustainable yield and its control strategy

    International Nuclear Information System (INIS)

    Jana, Debaldev; Agrawal, Rashmi; Upadhyay, Ranjit Kumar; Samanta, G.P.

    2016-01-01

    Highlights: • Age-selective harvesting of prey and predator are considered by multi-delayed prey-predator system. • System experiences stable coexistence to oscillatory mode and vice versa via Hopf-bifurcation depending upon the parametric restrictions. • MSY, bionomic equilibrium and optimal harvesting policy are also depending upon the age-selection of prey and predator. • All the analytic results are delay dependent. • Numerical examples support the analytical findings. - Abstract: Life history of ecological resource management and empirical studies are increasingly documenting the impact of selective harvesting process on the evolutionary stable strategy of both aquatic and terrestrial ecosystems. In the present study, the interaction between population and their independent and combined selective harvesting are framed by a multi-delayed prey-predator system. Depending upon the age selection strategy, system experiences stable coexistence to oscillatory mode and vice versa via Hopf-bifurcation. Economic evolution of the system which is mainly featured by maximum sustainable yield (MSY), bionomic equilibrium and optimal harvesting vary largely with the commensurate age selections of both population because equilibrium population abundance becomes age-selection dependent. Our study indicates that balance between harvesting delays and harvesting intensities should be maintained for better ecosystem management. Numerical examples support the analytical findings.

  18. Health and human rights in eastern Myanmar prior to political transition: a population-based assessment using multistaged household cluster sampling.

    Science.gov (United States)

    Parmar, Parveen K; Benjamin-Chung, Jade; Smith, Linda S; Htoo, Saw Nay; Laeng, Sai; Lwin, Aye; Mahn, Mahn; Maung, Cynthia; Reh, Daniel; Shwe Oo, Eh Kalu; Lee, Thomas; Richards, Adam K

    2014-05-05

    Myanmar/Burma has received increased development and humanitarian assistance since the election in November 2010. Monitoring the impact of foreign assistance and economic development on health and human rights requires knowledge of pre-election conditions. From October 2008-January 2009, community-based organizations conducted household surveys using three-stage cluster sampling in Shan, Kayin, Bago, Kayah, Mon and Tanintharyi areas of Myanmar. Data was collected from 5,592 heads of household on household demographics, reproductive health, diarrhea, births, deaths, malaria, and acute malnutrition of children 6-59 months and women aged 15-49 years. A human rights focused survey module evaluated human rights violations (HRVs) experienced by household members during the previous year. Estimated infant and under-five rates were 77 (95% CI 56 to 98) and 139 (95% CI 107 to 171) deaths per 1,000 live births; and the crude mortality rate was 13 (95% CI 11 to 15) deaths per thousand persons. The leading respondent-reported cause of death was malaria, followed by acute respiratory infection and diarrhea, causing 21.2% (95% CI 16.5 to 25.8), 16.6% (95% CI 11.8 to 21.4), and 12.3% (95% CI 8.7 to 15.8), respectively. Over a third of households suffered at least one human rights violation in the preceding year (36.2%; 30.7 to 41.7). Household exposure to forced labor increased risk of death among infants (rate ratio (RR) = 2.2; 95% CI 1.1 to 4.4) and children under five (RR = 2.1; 95% CI 1.3 to 3.6). The proportion of children suffering from moderate to severe acute malnutrition was higher among households that were displaced (prevalence ratio (PR) = 3.3; 95% CI 1.9 to 5.6). Prior to the 2010 election, populations of eastern Myanmar experienced high rates of disease and death and high rates of HRVs. These population-based data provide a baseline that can be used to monitor national and international efforts to improve the health and human rights situation in the

  19. Environmental gradients predict the genetic population structure of a coral reef fish in the Red Sea

    KAUST Repository

    Nanninga, Gerrit B.

    2014-01-20

    The relatively recent fields of terrestrial landscape and marine seascape genetics seek to identify the influence of biophysical habitat features on the spatial genetic structure of populations or individuals. Over the last few years, there has been accumulating evidence for the effect of environmental heterogeneity on patterns of gene flow and connectivity in marine systems. Here, we investigate the population genetic patterns of an anemonefish, Amphiprion bicinctus, along the Saudi Arabian coast of the Red Sea. We collected nearly one thousand samples from 19 locations, spanning approximately 1500 km, and genotyped them at 38 microsatellite loci. Patterns of gene flow appeared to follow a stepping-stone model along the northern and central Red Sea, which was disrupted by a distinct genetic break at a latitude of approximately 19°N. The Red Sea is characterized by pronounced environmental gradients along its axis, roughly separating the northern and central from the southern basin. Using mean chlorophyll-a concentrations as a proxy for this gradient, we ran tests of isolation by distance (IBD, R2 = 0.52) and isolation by environment (IBE, R2 = 0.64), as well as combined models using partial Mantel tests and multiple matrix regression with randomization (MMRR). We found that genetic structure across our sampling sites may be best explained by a combined model of IBD and IBE (Mantel: R2 = 0.71, MMRR: R2 = 0.86). Our results highlight the potential key role of environmental patchiness in shaping patterns of gene flow in species with pelagic larval dispersal. We support growing calls for the integration of biophysical habitat characteristics into future studies of population genetic structure. © 2014 John Wiley & Sons Ltd.

  20. Environmental gradients predict the genetic population structure of a coral reef fish in the Red Sea

    KAUST Repository

    Nanninga, Gerrit B.; Saenz Agudelo, Pablo; Manica, Andrea; Berumen, Michael L.

    2014-01-01

    The relatively recent fields of terrestrial landscape and marine seascape genetics seek to identify the influence of biophysical habitat features on the spatial genetic structure of populations or individuals. Over the last few years, there has been accumulating evidence for the effect of environmental heterogeneity on patterns of gene flow and connectivity in marine systems. Here, we investigate the population genetic patterns of an anemonefish, Amphiprion bicinctus, along the Saudi Arabian coast of the Red Sea. We collected nearly one thousand samples from 19 locations, spanning approximately 1500 km, and genotyped them at 38 microsatellite loci. Patterns of gene flow appeared to follow a stepping-stone model along the northern and central Red Sea, which was disrupted by a distinct genetic break at a latitude of approximately 19°N. The Red Sea is characterized by pronounced environmental gradients along its axis, roughly separating the northern and central from the southern basin. Using mean chlorophyll-a concentrations as a proxy for this gradient, we ran tests of isolation by distance (IBD, R2 = 0.52) and isolation by environment (IBE, R2 = 0.64), as well as combined models using partial Mantel tests and multiple matrix regression with randomization (MMRR). We found that genetic structure across our sampling sites may be best explained by a combined model of IBD and IBE (Mantel: R2 = 0.71, MMRR: R2 = 0.86). Our results highlight the potential key role of environmental patchiness in shaping patterns of gene flow in species with pelagic larval dispersal. We support growing calls for the integration of biophysical habitat characteristics into future studies of population genetic structure. © 2014 John Wiley & Sons Ltd.

  1. Modelling population effects of juvenile offshore fish displacement towards adult habitat

    DEFF Research Database (Denmark)

    van de Wolfshaar, K.E.; Tulp, I.; Wennhage, H.

    2015-01-01

    consequences on population dynamics through changes in resource use and competition. To explore this, a conceptual stage-structured model was developed with 3 stages and 2 resources and allowing a move of large juveniles from the shallow to the deep habitat. Large juveniles compete with small juveniles...... in shallow waters and with adults in deeper waters. Alternative stable states occur, with one state dominated by small juvenile biomass and the other dominated by adult biomass. The model results show for both states that while large juvenile biomass responds to a change in time spent in the deep habitat...

  2. Fish –based diet- correlations between metabolism of carbohydrates, lipidis and proteins. Study case population of the Sulina Town, Danube Delta

    Directory of Open Access Journals (Sweden)

    Georgiana ENE

    2016-06-01

    Full Text Available According to literature data, the normal values of biochemical parameters in blood vary by sex, age, geographical region, and type of diet. The aim of this study was to analyze the benefits of a fish-based diet among the population of Sulina, in the Danube Delta (3,663 individuals, by performing a comparative hepatic evaluation, lipid profile, serum glucose levels and total protein profile of these patients. Fish is an important source of protein with high biological value, containing all essential aminoacids and low lipid levels. The novelty of the research is represented by the analyzed geographical area. The Danube Delta had no medical analysis laboratory until 2010, when the RoutineMed Sulina laboratory was opened. Patients had a set of biochemical tests in the RoutineMed Sulina laboratory and declared they eat fish or fish-based products at least once a week. Tests were performed on 200 patients for the evaluation of the liver of these patients: Aspartate Amino Transferase, alanine amino transferase, de Ritis ratio, High Density Lipoprotein, Low Density Lipoprotein, total lipids, total cholesterol, triglycerides and 200 tests for the evaluation of the serum glucose levels and total protein. Both women and men were involved in the research and patients were grouped into age ranges: 20-40 years, 40-60 years, > 60 years. The values obtained were statistically analyzed using the SPSS v. 20 software and then compared to the ranges considered normal for these parameters. The results obtained showed that patients with a fish-based diet seem to be healthier than those with a diet in which fish meat is scarce, as their blood biochemical parameters values are closer to normal, which leads to the conclusion that including fish and fish products in people's regular diet is beneficial in preventing lipid, protein and carbohydrate metabolism disorders and preserving the overall health of the body.

  3. Mercury exposure through fish consumption in riparian populations at reservoir Guri, using nuclear techniques, Bolivar State, Venezuela. Highlights and achievements

    International Nuclear Information System (INIS)

    Bermudez, Dario

    2002-01-01

    Full text: Highlights and achievements: At present, according to our results so far, we have teamed that this project has an important social component which we have to take into account. The characteristics of the population in the nearby of reservoir Guri and the changes in the circumstances economic, politic and social of this country are causing quickly and severely modifications on the living conditions of that people. It is a reality that these changes can occur in a sensible manner between the time we collect the information and when the data arrives finally to the institutions. The communities included in this project are represented by social groups consolidated for more than 200 years so even if we may observe changes in their living conditions, it is intrinsic to them the presence of subjective structures that impose both individual and group behaviors that some time do not agree with the planner interest. On the other hand we believe that was obtained a very important information related to the socioeconomic situation of the two populated centers sampled and on the habits of fish consuming. In addition, we did an approximation of the total population in these localities. In the future we have to do the same with the other communities because of the lack information up to date. The 2001 census will be available next year. We have now the selected homes and individuals to start working with the next steps of the project. In the framework of the project we promote several meeting in order to design an intercalibration program among different laboratories for metal analysis. Actually these labs are filling in a simple questionnaire to harmonize the program. This activity has had the acceptance of the Pan-American Sanitary Office, Regional Office of the World Health Organization in Venezuela. (author)

  4. Relationship between obesity, metabolic syndrome, and nonalcoholic fatty liver disease in the elderly agricultural and fishing population of Taiwan.

    Science.gov (United States)

    Shen, Hsi-Che; Zhao, Zi-Hao; Hu, Yi-Chun; Chen, Yu-Fen; Tung, Tao-Hsin

    2014-01-01

    The purpose of this study was to explore the relationship between obesity, the metabolic syndrome, and nonalcoholic fatty liver disease (NAFLD) in the elderly agricultural and fishing population of Taipei, Taiwan. The study participants comprised 6,511 (3,971 male and 2,540 female) healthy elderly subjects voluntarily attending a teaching hospital for a physical check-up in 2010. Blood samples and real-time ultrasound-proven fatty liver sonography results were collected. The prevalence of NAFLD in this elderly population was 27.2%, including mild NAFLD (16.0%), moderate NAFLD (10.3%), and severe NAFLD (0.9%). The prevalence of moderate or severe NAFLD for metabolic syndrome proved to be substantially greater (P<0.0001, χ(2) test) for one or two metabolic factors. Using multinomial logistic regression analysis, age, sex, metabolic syndrome, and higher body mass index had a statistically significant association with mild NAFLD. Age, sex, metabolic syndrome, higher body mass index, and higher alanine aminotransferase were significantly related to moderate NAFLD. In addition, higher body mass index, higher uric acid, and higher alanine aminotransferase levels were significantly related to severe NAFLD. The sensitivity and specificity of body mass index and waist circumference as markers of NAFLD were estimated to be 81% and 84%, respectively, and 77% and 69%, respectively. The prevalence of mild or moderate NAFLD was related to obesity and metabolic syndrome. Higher body mass index was also related to severe NAFLD but not to metabolic syndrome. Targeting this population for control of obesity and improved metabolic function is important.

  5. Benthic and fish population monitoring associated with a marine protected area in the nearshore waters of Grenada, Eastern Caribbean

    Directory of Open Access Journals (Sweden)

    Robert Anderson

    2012-03-01

    Full Text Available Annual benthic and fish population surveys were completed at five locations in the nearshore waters along Grenada´s southwest coast during 2008-2010. Two survey sites are located in a newly launched Marine Protected Area (MPA. Photo Quadrat (PQ and Point Line Intercept (PLI surveys were used to determine substrate cover. Algae was the primary live cover increasing significantly from 45.9% in 2008 to 52.7% in 2010 (PLI. Algae was also predominant (61.0%-59.3% in the PQ surveys although annual variation was not significant. Hard coral cover ranged from 16.5% to 15.4% (PLI and 11.4% to12.0% (PQ with no significant differences between years. Branching and encrusting corals occurred more frequently than massive corals. In the three annual surveys neither algal cover nor hard coral varied significantly between MPA and non-protected areas (PLI. Relative abundance of fishes along 30x2m belt transects did not vary significantly among years however density of fishes decreased significantly across years for most major groups. Chromis spp. dominated the survey sites at 65.2% in 2008 and 49.8% in 2010, followed by territorial damselfish,11.1% and 15.5%, wrasse increased from 7.3% to 15.5%. Both the substrate cover and fish survey data analyses indicated a stable but degraded community. Annual surveys are planned at these sites for the foreseeable future. Existing and future data from this project will be valuable in determining the efficacy of MPA management, guiding resource management decisions and monitoring the health status of Grenada’s valuable reef systemsUn estudio sobre poblaciones bentónicas y de peces fue realizado en cinco localidades en la zona costera en el suroeste de Grenada entre 2008 y 2010. Dos sitios se ubicaron en una Área Marina Portegida (AMP recientemente creada. Para determinar la cobertura se utilizaron foto-cuadrantes (FQ y transectos de intersección de puntos (TIP. Las algas fueron el principal componente del bentos

  6. Population Genetic Structure and Genetic Diversity in Twisted-Jaw Fish, Belodontichthys truncatus Kottelat & Ng, 1999 (Siluriformes: Siluridae, from Mekong Basin

    Directory of Open Access Journals (Sweden)

    Surapon Yodsiri

    2017-01-01

    Full Text Available The Mekong River and its tributaries possess the second highest diversity in fish species in the world. However, the fish biodiversity in this river is threatened by several human activities, such as hydropower plant construction. Understanding the genetic diversity and genetic structure of the species is important for natural resource management. Belodontichthys truncatus Kottelat & Ng is endemic to the Mekong River basin and is an important food source for people in this area. In this study, the genetic diversity, genetic structure, and demographic history of the twisted-jaw fish, B. truncatus, were investigated using mitochondrial cytochrome b gene sequences. A total of 124 fish specimens were collected from 10 locations in the Mekong and its tributaries. Relatively high genetic diversity was found in populations of B. truncatus compared to other catfish species in the Mekong River. The genetic structure analysis revealed that a population from the Chi River in Thailand was genetically significantly different from other populations, which is possibly due to the effect of genetic drift. Demographic history analysis indicated that B. truncatus has undergone recent demographic expansion dating back to the end of the Pleistocene glaciation.

  7. Immigration Rates during Population Density Reduction in a Coral Reef Fish

    Science.gov (United States)

    Turgeon, Katrine; Kramer, Donald L.

    2016-01-01

    Although the importance of density-dependent dispersal has been recognized in theory, few empirical studies have examined how immigration changes over a wide range of densities. In a replicated experiment using a novel approach allowing within-site comparison, we examined changes in immigration rate following the gradual removal of territorial damselfish from a limited area within a much larger patch of continuous habitat. In all sites, immigration occurred at intermediate densities but did not occur before the start of removals and only rarely as density approached zero. In the combined data and in 5 of 7 sites, the number of immigrants was a hump-shaped function of density. This is the first experimental evidence for hump-shaped, density-dependent immigration. This pattern may be more widespread than previously recognized because studies over more limited density ranges have identified positive density dependence at low densities and negative density dependence at high densities. Positive density dependence at low density can arise from limits to the number of potential immigrants and from behavioral preferences for settling near conspecifics. Negative density dependence at high density can arise from competition for resources, especially high quality territories. The potential for non-linear effects of local density on immigration needs to be recognized for robust predictions of conservation reserve function, harvest impacts, pest control, and the dynamics of fragmented populations. PMID:27271081

  8. A populational survey of 45S rDNA polymorphism in the Jefferson salamander Ambystoma jeffersonianum revealed by fluorescence in situ hybridization (FISH

    Directory of Open Access Journals (Sweden)

    Jinzhong FU

    2009-04-01

    Full Text Available The chromosomal localization of 45S ribosomal RNA genes in Ambystoma jeffersonianum was determined by fluorescence in situ hybridization with 18S rDNA fragment as a probe (FISH-rDNA. Our results revealed the presence of rDNA polymorphism among A.jeffersonianum populations in terms of number, location and FISH signal intensity on the chromosomes. Nine rDNA cytotypes were found in ten geographically isolated populations and most of them contained derivative rDNA sites. Our preliminary study provides strong indication of karyotypic diversification of A.jeffersonianum that is demonstrated by intraspecific variation of 45S rDNA cytotypes. rDNA cytotype polymorphism has been described in many other caudate amphibians. We predict that habitat isolation, low dispersal ability and decline of effective population size could facilitate the fixation and accumulation of variable rDNA cytotypes during their chromosome evolution.

  9. An Evaluation of Parametric and Nonparametric Models of Fish Population Response.

    Energy Technology Data Exchange (ETDEWEB)

    Haas, Timothy C.; Peterson, James T.; Lee, Danny C.

    1999-11-01

    Predicting the distribution or status of animal populations at large scales often requires the use of broad-scale information describing landforms, climate, vegetation, etc. These data, however, often consist of mixtures of continuous and categorical covariates and nonmultiplicative interactions among covariates, complicating statistical analyses. Using data from the interior Columbia River Basin, USA, we compared four methods for predicting the distribution of seven salmonid taxa using landscape information. Subwatersheds (mean size, 7800 ha) were characterized using a set of 12 covariates describing physiography, vegetation, and current land-use. The techniques included generalized logit modeling, classification trees, a nearest neighbor technique, and a modular neural network. We evaluated model performance using out-of-sample prediction accuracy via leave-one-out cross-validation and introduce a computer-intensive Monte Carlo hypothesis testing approach for examining the statistical significance of landscape covariates with the non-parametric methods. We found the modular neural network and the nearest-neighbor techniques to be the most accurate, but were difficult to summarize in ways that provided ecological insight. The modular neural network also required the most extensive computer resources for model fitting and hypothesis testing. The generalized logit models were readily interpretable, but were the least accurate, possibly due to nonlinear relationships and nonmultiplicative interactions among covariates. Substantial overlap among the statistically significant (P<0.05) covariates for each method suggested that each is capable of detecting similar relationships between responses and covariates. Consequently, we believe that employing one or more methods may provide greater biological insight without sacrificing prediction accuracy.

  10. Fewer but not smaller schools in declining fish and krill populations.

    Science.gov (United States)

    Brierley, Andrew S; Cox, Martin J

    2015-01-05

    Many pelagic species (species that live in the water column), including herring and krill, aggregate to form schools, shoals, or swarms (hereafter simply "schools," although the words are not synonyms). Schools provide benefits to individual members, including locomotory economy and protection from predators that prey on individuals, but paradoxically make schooling species energetically viable and commercially attractive targets for predators of groups and for fishers. Large schools are easier to find and yield greater prey/catch than small schools, and there is a requirement from fields as diverse as theoretical ecology and fisheries management to understand whether and how aggregation sizes change with changing population size. We collated data from vertical echosounder surveys of taxonomically diverse pelagic stocks from geographically diverse ecosystems. The data contain common significant positive linear stock-biomass to school-number relationships. They show that the numbers of schools in the stocks change with changing stock biomass and suggest that the distributions of school sizes do not change with stock biomass. New data that we collected using a multibeam sonar, which can image entire schools, contained the same stock-biomass to school-number relationship and confirm that the distribution of school sizes is not related to changing stock size: put simply, as stocks decline, individuals are distributed among fewer schools, not smaller schools. Since school characteristics affect catchability (the ease or difficulty with which fishers can capture target species) and availability of prey to predators, our findings have commercial and ecological implications, particularly within the aspirational framework of ecosystem-based management of marine systems. Copyright © 2015 Elsevier Ltd. All rights reserved.

  11. Tolga power plant. Assessment of impacts on the evertebrate population and fish; Tolga kraftverk. Utredning av konsekvenser for bunndyr og fisk

    Energy Technology Data Exchange (ETDEWEB)

    Museth, J.; Johnsen, S.I.; Sandlund, O.T.; Arnekleiv, J.V.; Kjaerstad, G.; Kraaboel, M.

    2012-07-01

    Based on existing literature and conducted investigations of influence to the various development options for Tolga power plant estimated to comprise between Glomma Hoeyegga south of Alvdal and Rost waterfall in Os. This is a river length of about 85 km. The value of the specific areas that will be directly affected by the various development options are assessed based on the relative importance of these for the maintenance of fish / Benthic production and preservation of life history variation in the impact area as a whole. These assessments are made on the basis of the area's size and the presence of key habitats (Eg. Spawning grounds, wintering grounds, nursery areas) in the affected areas. Assessment of the effect of the various development options are made regardless of valuation. Of influence today viable populations of both trout and grayling. These two species are In addition to the stone fill and partly minnows dominant in sections with high water speed, while the proportion of species like whitefish, perch, burbot, pike and bekkenioeye increases the more the floating parties. Grayling population in the area is considered very large compared with other rivers in eastern Norway. Telemetry and genetics studies showed that there are significant fish migrations in the impact and the stretch that will be directly affected by the various development options. An overall assessment of the consequences for grayling, trout, other fish species and benthic considered to medium negative (-) for option 3A, medium / small negative (- (-) for alternative 3B and 2A and small negative (-) for Alternative 2B. This assessment assumes that the bidirectional fish walks past the dam and upstream migrations past the tunnel outlet is maintained at a high level on a problem given high priority in planning, building and the action-oriented after studies. The assessment also requires measures to reduce scope and consequences of failures of the power plant implemented. If bi fish

  12. [Further information on fish parasites from Lake Trasimeno. II. Observations on the population of Scardinius erythrophthalmus L].

    Science.gov (United States)

    Aisa, E; Desideri, L; Guerrieri, P; Bonelli, P

    1983-09-30

    An investigation was carried out to identify the actual state of parasitism in the Scardinius erythrophthalmus L. population of Trasimeno lake (Umbria, Italy). Seasonal samples of fishes were taken in different points of the litoral and pelagic zones. The parasites found, together with the somatometric values and the characteristics of their localizations are reported. It has been found: a high number of infested specimens; eleven species of parasites, of which five were not yet known to be in the lake; frequency variations of certain species. The species of parasites observed are distributed in the Paleartic region. The five species, whose presence was not known in the lake, are considered to be allochtonous. The organs most frequently involved were, in descending order, the gills, the ureters, the gonads, the intestinal and mesenteric serous membranes, the liver. The most marked histologic alterations and reactions were observed as a consequence of Ergasilus sieboldi Nord. action and, in several cases, with the presence of Ligula intestinalis L. larvae.

  13. Three sympatric karyomorphs in the fish Astyanax fasciatus (Teleostei, Characidae do not seem to hybridize in natural populations

    Directory of Open Access Journals (Sweden)

    Maressa Ferreira-Neto

    2012-01-01

    Full Text Available Ninety individuals of the characid fish Astyanax fasciatus (Cuvier, 1819 were collected at Água da Madalena stream (Botucatu, São Paulo, Brazil and analyzed for diploid chromosome number 2n and karyotype composition as well as for the chromosomal location of the 5S and 18S ribosomal DNA (rDNA. Whereas no chromosome differences were associated with sex, three different karyomorphs with diploid chromosome numbers 2n=46, 2n=48 and 2n=50 were found. No intermediate 2n numbers were discovered. The 2n=50 karyomorph showed some differences in 18S rDNA location compared to the two other karyomorphs. Finally, all specimens with the 2n=46 karyomorph showed the presence of a partly heterochromatic macro supernumerary chromosome, which was absent in all individuals with the two other karyomorphs. All these results suggest that indviduals of the three different karyomorphs are not likely to hybridize in the examined populations. Our findings strongly suggest the presence of three separate species (sensu biological species concept easily diagnosed on the basis of differences in the diploid chromosome numbers and other chromosomal markers.

  14. Great lakes prey fish populations: a cross-basin overview of status and trends based on bottom trawl surveys, 1978-2012

    Science.gov (United States)

    Gorman, Owen T.

    2012-01-01

    The assessment of prey fish stocks in the Great Lakes have been conducted annually with bottom trawls since the 1970s by the Great Lakes Science Center, sometimes assisted by partner agencies. These stock assessments provide data on the status and trends of prey fish that are consumed by important commercial and recreational fishes. Although all these annual surveys are conducted using bottom trawls, they differ among the lakes in the proportion of the lake covered, seasonal timing, bottom trawl gear used, and the manner in which the trawl is towed (across or along bottom contours). Because each assessment is unique in one or more important aspects, direct comparison of prey fish catches among lakes is not straightforward. However, all of the assessments produce indices of abundance or biomass that can be standardized to facilitate comparisons of status and trends across all the Great Lakes. In this report, population indices were standardized to the highest value for a time series within each lake for the following principal prey species: cisco (Coregonus artedi), bloater (C. hoyi), rainbow smelt (Osmerus mordax), and alewife (Alosa pseudoharengus). Indices were also provided for round goby (Neogobius melanostomus), an invasive fish that has proliferated throughout the basin over the past 18 years. These standardized indices represent the best available long-term indices of relative abundance for these fishes across all of the Great Lakes. In this report, standardized indices are presented in graphical form along with synopses to provide a short, informal cross-basin summary of the status and trends of principal prey fishes. In keeping with this intent, tables, references, and a detailed discussion were omitted.

  15. Trajectories of metabolic risk factors and biochemical markers prior to the onset of type 2 diabetes : the population-based longitudinal Doetinchem study

    NARCIS (Netherlands)

    Hulsegge, G; Spijkerman, A M W; van der Schouw, Y T; Bakker, Stephan J. L.; Gansevoort, R T; Smit, H A; Verschuren, W M M

    2017-01-01

    BACKGROUND: Risk factors often develop at young age and are maintained over time, but it is not fully understood how risk factors develop over time preceding type 2 diabetes. We examined how levels and trajectories of metabolic risk factors and biochemical markers prior to diagnosis differ between

  16. SE Asian freshwater fish population and networks: the impacts of climatic and environmental change on a vital resource

    Science.gov (United States)

    Santos, Rita; Parsons, Daniel; Cowx, Ian

    2016-04-01

    The Mekong River is the 10th largest freshwater river in the world, with the second highest biodiversity wealth, behind the much larger Amazon basin. The fisheries activity in the Lower Mekong countries counts for 2.7 million tons of fish per year, with an estimated value worth up to US 7 billion. For the 60 million people living in the basin, fish represent their primary source of economic income and protein intake, with an average per capita consumption estimated at 45.4 Kg. The proposed hydropower development in the basin is threatening its sustainability and resilience. Such developments affect fish migration patterns, hydrograph flood duration and magnitudes and sediment flux. Climate change is also likely to impact the basin, exacerbating the issues created by development. As a monsoonal system, the Mekong River's pronounced annual flood pulse cycle is important in creating variable habitat for fish productivity. Moreover, the annual flood also triggers fish migration and provides vital nutrients carried by the sediment flux. This paper examines the interactions between both dam development and climate change scenarios on fish habitat and habitat connectivity, with the aim of predicting how these will affect fish species composition and fisheries catch. The project will also employ Environmental DNA (eDNA) to quantify and understand the species composition of this complex and large freshwater system. By applying molecular analysis, it is possible to trace species abundance and migration patterns of fish and evaluate the ecological networks establish between an inland system. The aim of this work is to estimate, using process-informed models, the impacts of the proposed dam development and climate change scenarios on the hydrological and hydraulic conditions of habitat availability for fish. Furthermore, it will evaluate the connectivity along the Mekong and its tributaries, and the importance of maintaining these migration pathways, used by a great diversity

  17. Invasive cyprinid fish in Europe originate from the single introduction of an admixed source population followed by a complex pattern of spread.

    Directory of Open Access Journals (Sweden)

    Andrea Simon

    Full Text Available The Asian cyprinid fish, the topmouth gudgeon (Pseudorasbora parva, was introduced into Europe in the 1960s. A highly invasive freshwater fish, it is currently found in at least 32 countries outside its native range. Here we analyse a 700 base pair fragment of the mitochondrial cytochrome b gene to examine different models of colonisation and spread within the invasive range, and to investigate the factors that may have contributed to their invasion success. Haplotype and nucleotide diversity of the introduced populations from continental Europe was higher than that of the native populations, although two recently introduced populations from the British Isles showed low levels of variability. Based on coalescent theory, all introduced and some native populations showed a relative excess of nucleotide diversity compared to haplotype diversity. This suggests that these populations are not in mutation-drift equilibrium, but rather that the relative inflated level of nucleotide diversity is consistent with recent admixture. This study elucidates the colonisation patterns of P. parva in Europe and provides an evolutionary framework of their invasion. It supports the hypothesis that their European colonisation was initiated by their introduction to a single location or small geographic area with subsequent complex pattern of spread including both long distance and stepping-stone dispersal. Furthermore, it was preceded by, or associated with, the admixture of genetically diverse source populations that may have augmented its invasive-potential.

  18. Effects of coconut and fish oils on ruminal methanogenesis, fermentation, and abundance and diversity of microbial populations in vitro.

    Science.gov (United States)

    Patra, A K; Yu, Z

    2013-03-01

    Coconut (CO) and fish (FO) oils were previously shown to inhibit rumen methanogenesis and biohydrogenation, which mitigates methane emission and helps improve beneficial fatty acids in meat and milk. This study aimed at investigating the comparative effects of CO and FO on the methanogenesis, fermentation, and microbial abundances and diversity in vitro rumen cultures containing different doses (0, 3.1, and 6.2 mL/L) of each oil and 400mg feed substrate using rumen fluid from lactating dairy cows as inocula. Increasing doses of CO and FO quadratically decreased concentrations of methane, but hydrogen concentrations were only increased quadratically by CO. Both oils linearly decreased dry matter and neutral detergent fiber digestibility of feeds but did not affect the concentration of total volatile fatty acids. However, CO reduced acetate percentage and acetate to propionate ratio and increased the percentages of propionate and butyrate to a greater extent than FO. Ammonia concentration was greater for CO than FO. As determined by quantitative real-time PCR, FO had greater inhibition to methanogens than CO, but the opposite was true for protozoal, Ruminococcus flavefaciens, and Fibrobacter succinogenes. Ruminococcus albus was not affected by either oil. Denaturing gradient gel electrophoresis (DGGE) profiles revealed that bacterial and archaeal community composition were changed differently by oil type. Based on Pareto-Lorenz evenness curve analysis of the DGGE profiles, CO noticeably changed the functional organization of archaea compared with FO. In conclusion, although both CO and FO decreased methane concentrations to a similar extent, the mode of reduction and the effect on abundances and diversity of archaeal and bacterial populations differed between the oils. Thus, the use of combination of CO and FO at a low dose may additively lower methanogenesis in the rumen while having little adverse effect on rumen fermentation. Copyright © 2013 American Dairy

  19. Estimating the effect of lay knowledge and prior contact with pulmonary TB patients, on health-belief model in a high-risk pulmonary TB transmission population.

    Science.gov (United States)

    Zein, Rizqy Amelia; Suhariadi, Fendy; Hendriani, Wiwin

    2017-01-01

    The research aimed to investigate the effect of lay knowledge of pulmonary tuberculosis (TB) and prior contact with pulmonary TB patients on a health-belief model (HBM) as well as to identify the social determinants that affect lay knowledge. Survey research design was conducted, where participants were required to fill in a questionnaire, which measured HBM and lay knowledge of pulmonary TB. Research participants were 500 residents of Semampir, Asemrowo, Bubutan, Pabean Cantian, and Simokerto districts, where the risk of pulmonary TB transmission is higher than other districts in Surabaya. Being a female, older in age, and having prior contact with pulmonary TB patients significantly increase the likelihood of having a higher level of lay knowledge. Lay knowledge is a substantial determinant to estimate belief in the effectiveness of health behavior and personal health threat. Prior contact with pulmonary TB patients is able to explain the belief in the effectiveness of a health behavior, yet fails to estimate participants' belief in the personal health threat. Health authorities should prioritize males and young people as their main target groups in a pulmonary TB awareness campaign. The campaign should be able to reconstruct people's misconception about pulmonary TB, thereby bringing around the health-risk perception so that it is not solely focused on improving lay knowledge.

  20. Genetic structure of winter populations of the endangered Indiana bat (Myotis sodalis) prior to the white nose syndrome epidemic: implications for the risk of disease spread

    Science.gov (United States)

    Maarten J. Vonhof; Sybill K. Amelon; Robert R. Currie; Gary F. McCracken

    2016-01-01

    The spread of white nose syndrome raises serious concerns about the long-term viability of affected bat species. Here we examine the geographic distribution of genetic variation, levels of population connectivity that may influence the spatial spread of WNS, and the likelihood that recent population declines in regions affected by WNS have led to the loss of unique...

  1. Fish Allergy

    Science.gov (United States)

    ... Cause Blog Vision Awards Common Allergens Fish Allergy Fish Allergy Learn about fish allergy, how to read ... that you must avoid both. Allergic Reactions to Fish Finned fish can cause severe and potentially life- ...

  2. Assess/monitor effects of MPA status on reef fish populations and spawning aggregations in the Tortugas Ecological Reserves

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — We supply abundance information of fish species along multiple randomly oriented transects at the lowest possible taxonomic level. This information is collected from...

  3. Variation in size frequency distribution of coral populations under different fishing pressures in two contrasting locations in the Indian Ocean.

    Science.gov (United States)

    Grimsditch, G; Pisapia, C; Huck, M; Karisa, J; Obura, D; Sweet, M

    2017-10-01

    This study aimed to assess how the size-frequency distributions of coral genera varied between reefs under different fishing pressures in two contrasting Indian Ocean locations (the Maldives and East Africa). Using generalized linear mixed models, we were able to demonstrate that complex interactions occurred between coral genera, coral size class and fishing pressure. In both locations, we found Acropora coral species to be more abundant in non-fished compared to fished sites (a pattern which was consistent for nearly all the assessed size classes). Coral genera classified as 'stress tolerant' showed a contrasting pattern i.e. were higher in abundance in fished compared to non-fished sites. Site specific variations were also observed. For example, Maldivian reefs exhibited a significantly higher abundance in all size classes of 'competitive' corals compared to East Africa. This possibly indicates that East African reefs have already been subjected to higher levels of stress and are therefore less suitable environments for 'competitive' corals. This study also highlights the potential structure and composition of reefs under future degradation scenarios, for example with a loss of Acropora corals and an increase in dominance of 'stress tolerant' and 'generalist' coral genera. Copyright © 2017. Published by Elsevier Ltd.

  4. Fish-allergic patients may be able to eat fish.

    Science.gov (United States)

    Mourad, Ahmad A; Bahna, Sami L

    2015-03-01

    Reported fish allergy prevalence varies widely, with an estimated prevalence of 0.2% in the general population. Sensitization to fish can occur by ingestion, skin contact or inhalation. The manifestations can be IgE or non-IgE mediated. Several fish allergens have been identified, with parvalbumins being the major allergen in various species. Allergenicity varies among fish species and is affected by processing or preparation methods. Adverse reactions after eating fish are often claimed to be 'allergy' but could be a reaction to hidden food allergen, fish parasite, fish toxins or histamine in spoiled fish. Identifying such causes would allow free consumption of fish. Correct diagnosis of fish allergy, including the specific species, might provide the patient with safe alternatives. Patients have been generally advised for strict universal avoidance of fish. However, testing with various fish species or preparations might identify one or more forms that can be tolerated.

  5. The total body length and body weight examination among gabus Sentani fish population, Oxyeleotris heterodon, Weber 1907 (Pisces: Eleotridae) of Sentani lake, Papua, Indonesia

    Science.gov (United States)

    Sriyani, E. D.; Abinawanto, Bowolaksono, A.

    2017-07-01

    The gabus Sentani fish lived in the Sentani Lake, Papua, since million years ago. Nowadays, the population of those species is getting extinct because of the overexploitation, whereas the culture effort of this species has not been developed, yet. The purpose of the study was to examine the total body length and body weight collected from some villages surrounding Sentani Lake such as Ifar village, Sosiri village, and Putali village. The body weight average of gabus fish from Ifar village, Sosiri village, and Putali village were 373.53 g, 426.86 g, and 118.34 g respectively. While the total body length average of gabus Sentani fish from Ifar village, Sosiri village, and Putali village were 279.30 mm, 223.30 mm and 222.06 mm, respectively. The growth model was W = 0.021067L3.086 with R2 value was 35.8 %, and r value was 0.598. Gabus Sentani fish, Oxyeleotris heterodon (Weber 1907) exhibited positive allometric (b > 3).

  6. Diet, reproduction and population structure of the introduced Amazonian fish Cichla piquiti (Perciformes: Cichlidae) in the Cachoeira Dourada reservoir (Paranaíba River, central Brazil).

    Science.gov (United States)

    Luiz, Tatiane Ferraz; Velludo, Marcela Roquetti; Peret, Alberto Carvalho; Rodrigues Filho, Jorge Luiz; Peret, André Moldenhauer

    2011-06-01

    The Blue Peacock Bass (Cichla piquiti), native to the Tocantins-Araguaia river basin of the Amazon system, was introduced into the basin of the Paranaíba River, Paraná River system. Cachoeira Dourada reservoir is one of a series of dams on the Paranaíba River in central Brazil, where this fish has become established. A study of its feeding spectrum, combined with information about its reproductive characteristics and population structure, would enable the current state of this species in the reservoir to be assessed and might provide useful data for the management of other species native to this habitat. This study showed that the peacock bass has no predators or natural competitors in the reservoir and that reproduces continuously, with high reproductive rates, and has a smaller median length at first maturity (L50) than other species of Cichla. Its successful establishment in habitats strongly affected by human activity should cause changes in the whole structure of the local fish communities. Nonetheless, in this reservoir, there appears to be some sharing of the functions of this species with native carnivorous fish, a situation that may be sustained by the presence of a wide variety of foraging fish.

  7. On the relevance of genotoxicity for fish populations I: effects of a model genotoxicant on zebrafish (Danio rerio) in a complete life-cycle test.

    Science.gov (United States)

    Diekmann, Markus; Hultsch, Veit; Nagel, Roland

    2004-05-28

    Genotoxicity may be detected in surface waters by means of various genotoxicity assays. In order to enable an ecotoxicological assessment of the consequences of such genotoxic potential for fish populations, a complete life-cycle test with zebrafish (Danio rerio) and the model genotoxicant 4-nitroquinoline-1-oxide (NQO) was conducted. Zebrafish (f1) were continuously exposed to NQO (i.e. 0.1, 0.3, 1.1, 2.9, and 14.6 microg/l, respectively) from fertilised eggs until sexual maturity. In addition to reproduction studies in the f1-generation, f2-fish were exposed to NQO during the first 6 weeks of development. Up to 2.9 microg/l NQO, fish did not display differences in survival and growth (P < 0.05). A NQO concentration of 14.6 microg/l, however, was lethal. Female fish exposed to all NQO concentrations up to 2.9 microg/l displayed a significant reduction in egg production (P < 0.05). A mathematical simulation revealed that exposure to weak concentrations of NQO is leading to an elevated extinction risk. Copyright 2004 Elsevier B.V.

  8. Diet, reproduction and population structure of the introduced Amazonian fish Cichla piquiti (Perciformes: Cichlidae in the Cachoeira Dourada reservoir (Paranaíba River, central Brazil

    Directory of Open Access Journals (Sweden)

    Tatiane Ferraz Luiz

    2011-06-01

    Full Text Available The Blue Peacock Bass (Cichla piquiti, native to the Tocantins-Araguaia river basin of the Amazon system, was introduced into the basin of the Paranaíba River, Paraná River system. Cachoeira Dourada reservoir is one of a series of dams on the Paranaíba River in central Brazil, where this fish has become established. A study of its feeding spectrum, combined with information about its reproductive characteristics and population structure, would enable the current state of this species in the reservoir to be assessed and might provide useful data for the management of other species native to this habitat. This study showed that the peacock bass has no predators or natural competitors in the reservoir and that reproduces continuously, with high reproductive rates, and has a smaller median length at first maturity (L50 than other species of Cichla. Its successful establishment in habitats strongly affected by human activity should cause changes in the whole structure of the local fish communities. Nonetheless, in this reservoir, there appears to be some sharing of the functions of this species with native carnivorous fish, a situation that may be sustained by the presence of a wide variety of foraging fish. Rev. Biol. Trop. 59 (2: 727-741. Epub 2011 June 01.

  9. The Application of Traits-Based Assessment Approaches to Estimate the Effects of Hydroelectric Turbine Passage on Fish Populations

    Energy Technology Data Exchange (ETDEWEB)

    Cada, Glenn F [ORNL; Schweizer, Peter E [ORNL

    2012-04-01

    One of the most important environmental issues facing the hydropower industry is the adverse impact of hydroelectric projects on downstream fish passage. Fish that migrate long distances as part of their life cycle include not only important diadromous species (such as salmon, shads, and eels) but also strictly freshwater species. The hydropower reservoirs that downstream-moving fish encounter differ greatly from free-flowing rivers. Many of the environmental changes that occur in a reservoir (altered water temperature and transparency, decreased flow velocities, increased predation) can reduce survival. Upon reaching the dam, downstream-migrating fish may suffer increased mortality as they pass through the turbines, spillways and other bypasses, or turbulent tailraces. Downstream from the dam, insufficient environmental flow releases may slow downstream fish passage rates or decrease survival. There is a need to refine our understanding of the relative importance of causative factors that contribute to turbine passage mortality (e.g., strike, pressure changes, turbulence) so that turbine design efforts can focus on mitigating the most damaging components. Further, present knowledge of the effectiveness of turbine improvements is based on studies of only a few species (mainly salmon and American shad). These data may not be representative of turbine passage effects for the hundreds of other fish species that are susceptible to downstream passage at hydroelectric projects. For example, there are over 900 species of fish in the United States. In Brazil there are an estimated 3,000 freshwater fish species, of which 30% are believed to be migratory (Viana et al. 2011). Worldwide, there are some 14,000 freshwater fish species (Magurran 2009), of which significant numbers are susceptible to hydropower impacts. By comparison, in a compilation of fish entrainment and turbine survival studies from over 100 hydroelectric projects in the United States, Winchell et al. (2000

  10. Effects of landscape features on population genetic variation of a tropical stream fish, Stone lapping minnow, Garra cambodgiensis, in the upper Nan River drainage basin, northern Thailand

    Directory of Open Access Journals (Sweden)

    Chaowalee Jaisuk

    2018-03-01

    Full Text Available Spatial genetic variation of river-dwelling freshwater fishes is typically affected by the historical and contemporary river landscape as well as life-history traits. Tropical river and stream landscapes have endured extended geological change, shaping the existing pattern of genetic diversity, but were not directly affected by glaciation. Thus, spatial genetic variation of tropical fish populations should look very different from the pattern observed in temperate fish populations. These data are becoming important for designing appropriate management and conservation plans, as these aquatic systems are undergoing intense development and exploitation. This study evaluated the effects of landscape features on population genetic diversity of Garra cambodgiensis, a stream cyprinid, in eight tributary streams in the upper Nan River drainage basin (n = 30–100 individuals/location, Nan Province, Thailand. These populations are under intense fishing pressure from local communities. Based on 11 microsatellite loci, we detected moderate genetic diversity within eight population samples (average number of alleles per locus = 10.99 ± 3.00; allelic richness = 10.12 ± 2.44. Allelic richness within samples and stream order of the sampling location were negatively correlated (P < 0.05. We did not detect recent bottleneck events in these populations, but we did detect genetic divergence among populations (Global FST = 0.022, P < 0.01. The Bayesian clustering algorithms (TESS and STRUCTURE suggested that four to five genetic clusters roughly coincide with sub-basins: (1 headwater streams/main stem of the Nan River, (2 a middle tributary, (3 a southeastern tributary and (4 a southwestern tributary. We observed positive correlation between geographic distance and linearized FST (P < 0.05, and the genetic differentiation pattern can be moderately explained by the contemporary stream network (STREAMTREE analysis, R2 = 0.75. The MEMGENE analysis

  11. Predicting the effects of copper on local population decline of 2 marine organisms, cobia fish and whiteleg shrimp, based on avoidance response.

    Science.gov (United States)

    Araújo, Cristiano V M; Cedeño-Macías, Luís A; Vera-Vera, Victoria C; Salvatierra, David; Rodríguez, Elizabeth N V; Zambrano, Ufredo; Kuri, Samir

    2016-02-01

    The present study focuses on avoidance response to predict population decline of the marine fish Rachycentron canadum (cobia) and larvae of the estuarine shrimp Litopenaeus vannamei (whiteleg shrimp). Avoidance of approximately 60% was recorded for the cobia fry exposed to 1.0 mg Cu/L, 1.60 mg Cu/L, and 1.80 mg Cu/L. For the shrimp larvae, avoidance was approximately 80% for all Cu concentrations. The population decline of cobia fry was conditioned by avoidance in lower concentrations. However, in higher concentrations mortality begins to play an important role. The displacement toward uncontaminated habitats might determine shrimp population decline. A Cu-contaminated environment can determine the habitat selection of both species and, therefore, their local population decline. © 2015 SETAC.

  12. The Effect on Selenium Concentrations of a Randomized Intervention with Fish and Mussels in a Population with Relatively Low Habitual Dietary Selenium Intake

    Science.gov (United States)

    Outzen, Malene; Tjønneland, Anne; Larsen, Erik H.; Andersen, Klaus K.; Christensen, Jane; Overvad, Kim; Olsen, Anja

    2015-01-01

    Selenium status of the Danish population is below that assumed optimal for the suggested protective effects against chronic diseases, including certain cancers. Fish and shellfish are important dietary sources of selenium in Denmark. We investigated the effect of increased fish and mussel intake on selenium blood concentrations in a population with relatively low habitual dietary selenium intake. We randomly assigned 102 healthy men and women (all non-smokers) aged 48–76 years to an intervention group (n = 51) or a control group (n = 51). Intervention participants received 1000 g fish and mussels/week for 26 weeks (~50 μg selenium/day). Controls received no intervention. Non-fasting blood samples were taken and whole blood selenium was determined using inductively coupled plasma-mass spectrometry (ICP-MS), and plasma selenoprotein P (SelP) was determined by high performance liquid chromatography coupled to ICP-MS. All available observations were included in linear multiple regression analysis to evaluate the effect of the intervention. The difference in mean change for intervention compared with control persons was 14.9 ng/mL (95% CI: 10.2, 19.7) for whole blood selenium, and 7.0 ng/mL (95% CI: 3.1, 10.9) for plasma SelP (Weeks 0–26). Selenium concentrations were significantly increased after 26 weeks of intervention, albeit to a lower degree than expected. PMID:25599275

  13. Population parameters and dynamic pool models of commercial fishes in the Beibu Gulf, northern South China Sea

    Science.gov (United States)

    Wang, Xuehui; Qiu, Yongsong; Du, Feiyan; Lin, Zhaojin; Sun, Dianrong; Huang, Shuolin

    2012-01-01

    Length-frequency data of eight commercial fish species in the Beibu Gulf (Golf of Tonkin), northern South China Sea, were collected during 2006-2007. Length-weight relationships and growth and mortality parameters were analyzed using FiSAT II software. Five species had isometric growth, two species had negative allometric growth, and one species had positive allometric growth. Overall, the exploitation rates of the eight species were lower in 2006-2007 than in 1997-1999: for four species ( Saurida tumbil, Saurida undosquamis, Argyrosomus macrocephalus, and Nemipterus virgatus) it was lower in 2006-2007 than in 1997-1999, for two species ( Parargyrops edita and Trichiurus haumela) it remained the same, and for the other two species ( Trachurus japonicus and Decapterus maruadsi) it was higher in 2006-2007 than in 1997-1999. The exploitation rates might have declined because of the decline in fishing intensity caused by high crude oil prices. The optimum exploitation rate, estimated using Beverton-Holt dynamic pool models, indicated that although fishes in the Beibu Gulf could sustain high exploitation rates, the under-size fishes at first capture resulted in low yields. To increase the yield per recruitment, it is more effective to increase the size at first capture than to control fishing effort.

  14. FRESHWATER FISH AND DECAPOD CRUSTACEAN POPULATIONS ON RÉUNION ISLAND, WITH AN ASSESSMENT OF SPECIES INTRODUCTIONS.

    Directory of Open Access Journals (Sweden)

    KEITH P.

    2002-01-01

    Full Text Available Streams of Réunion Island shelter with 26 fish species and 11 decapod crustacean species. Some species have been introduced (18%, some other are endemic to the island or to the Madagascar-Mascarenes region (16.2%, are originated from Indo-Pacific area (35.2% or from Indo-African area (27%. Gobiidae and Palaemonidae are the prevailing family in freshwaters, with the highest number of species. 16 species were introduced, mainly fishes, beginning at the turn of the 19th century, but only 4 of those have become acclimatised, while 7 have disappeared and the status of the other is uncertain.

  15. Population dynamics of calanoid copepods and the implications of their predation by clupeid fish in the Central Baltic Sea

    DEFF Research Database (Denmark)

    Möllmann, C.; Köster, Fritz

    2002-01-01

    . Additionally this study investigated the effect of predation by the major planktivorous fish species herring (Clupea harengus) and sprat (Sprattus sprattus) for the period 1977-1996 in the Gotland Basin (Central Baltic Sea). Examination of consumption by these fish species in relation to copepod production...... by sprat on CV/CVI of both copepod species in spring resulted in higher copepod mortality rates. In consequence, based on these results we suggest that the increase in the sprat stock since the late 1980s contributed to a decline of P. elongatus, and additionally prevented an even more pronounced...

  16. Thermal and maternal environments shape the value of early hatching in a natural population of a strongly cannibalistic freshwater fish

    DEFF Research Database (Denmark)

    Pagel, T.; Bekkevold, Dorte; Pohlmeier, S.

    2015-01-01

    Hatching early in the season is often assumed to elevate fitness, particularly in cannibalistic fish in which size-dependent predation mortality is a major selective force. While the importance of the thermal environment for the growth of fish is undisputed, the relevance of maternal effects...... represented by juvenile growth rate), but not female total length, to jointly contribute to explain within- and among-season size variation in juvenile pike. While there was no statistical evidence for maternal effects on offspring growth rate, fast female juvenile growth positively correlated...... in the wild and that early hatching does not generally produce size advantages in light of stochastically varying temperature conditions...

  17. Risk, treatment duration, and recurrence risk of postpartum affective disorder in women with no prior psychiatric history: A population-based cohort study.

    Directory of Open Access Journals (Sweden)

    Marie-Louise H Rasmussen

    2017-09-01

    Full Text Available Some 5%-15% of all women experience postpartum depression (PPD, which for many is their first psychiatric disorder. The purpose of this study was to estimate the incidence of postpartum affective disorder (AD, duration of treatment, and rate of subsequent postpartum AD and other affective episodes in a nationwide cohort of women with no prior psychiatric history.Linking information from several Danish national registers, we constructed a cohort of 457,317 primiparous mothers with first birth (and subsequent births from 1 January 1996 to 31 December 2013 (a total of 789,068 births and no prior psychiatric hospital contacts and/or use of antidepressants. These women were followed from 1 January 1996 to 31 December 2014. Postpartum AD was defined as use of antidepressants and/or hospital contact for PPD within 6 months after childbirth. The main outcome measures were risk of postpartum AD, duration of treatment, and recurrence risk. We observed 4,550 (0.6% postpartum episodes of AD. The analyses of treatment duration showed that 1 year after the initiation of treatment for their first episode, 27.9% of women were still in treatment; after 4 years, 5.4%. The recurrence risk of postpartum AD for women with a PPD hospital contact after first birth was 55.4 per 100 person-years; for women with postpartum antidepressant medication after first birth, it was 35.0 per 100 person-years. The rate of postpartum AD after second birth for women with no history of postpartum AD was 1.2 per 100 person-years. After adjusting for year of birth and mother's age, women with PPD hospital contact after first birth had a 46.4 times higher rate (95% CI 31.5-68.4 and women with postpartum antidepressant medication after their first birth had a 26.9 times higher rate (95% CI 21.9-33.2 of a recurrent postpartum episode after their second birth compared to women with no postpartum AD history. Limitations include the use of registry data to identify cases and limited

  18. The effect of nuclear facilities operation on fish populations and the Dukovany-Dalesice power complex under construction

    International Nuclear Information System (INIS)

    Penaz, M.

    1979-01-01

    The scope and the main results are described of the hydrobiological and ichthyological research into the Jihlava river in the neighbourhood of the Dukovany - Dalesice power plant complex. The effect of the power plant complex on the ecosystem of the affected river stretch is predicted, mainly on the fish community. (author)

  19. A Multiple Watershed Approach to Assessing the Effects of Habitat Restoration Actions on Anadromous and Resident Fish Populations, Technical Report 2003-2004.

    Energy Technology Data Exchange (ETDEWEB)

    Marmorek, David

    2004-03-01

    Habitat protection and restoration is a cornerstone of current strategies to restore ecosystems, recover endangered fish species, and rebuild fish stocks within the Columbia River Basin. Strategies featuring habitat restoration include the 2000 Biological Opinion on operation of the Federal Columbia River Power System (FCRPS BiOp) developed by the National Marine Fisheries Service (NMFS), the 2000 Biological Opinion on Bull Trout developed by the US Fish and Wildlife Service (USFWS), and Sub-Basin Plans developed under the Fish and Wildlife Program of the Northwest Power and Conservation Council (NWPCC). There is however little quantitative information about the effectiveness of different habitat restoration techniques. Such information is crucial for helping scientists and program managers allocate limited funds towards the greatest benefits for fish populations. Therefore, it is critical to systematically test the hypotheses underlying habitat restoration actions for both anadromous and resident fish populations. This pilot project was developed through a proposal to the Innovative Projects fund of the NWPCC (ESSA 2002). It was funded by the Bonneville Power Administration (BPA) following reviews by the Independent Scientific Review Panel (ISRP 2002), the Columbia Basin Fish and Wildlife Authority (CBFWA 2002), the NWPCC and BPA. The study was designed to respond directly to the above described needs for information on the effectiveness of habitat restoration actions, including legal measures specified in the 2000 FCRPS BiOp (RPA 183, pg. 9-133, NMFS 2000). Due to the urgency of addressing these measures, the timeline of the project was accelerated from a duration of 18 months to 14 months. The purpose of this pilot project was to explore methods for evaluating past habitat restoration actions and their effects on fish populations. By doing so, the project will provide a foundation of retrospective analyses, on which to build prospective, multi-watershed designs

  20. Which Fish Should I Eat? Perspectives Influencing Fish Consumption Choices

    Science.gov (United States)

    Choi, Anna L.; Karagas, Margaret R.; Mariën, Koenraad; Rheinberger, Christoph M.; Schoeny, Rita; Sunderland, Elsie; Korrick, Susan

    2012-01-01

    Background: Diverse perspectives have influenced fish consumption choices. Objectives: We summarized the issue of fish consumption choice from toxicological, nutritional, ecological, and economic points of view; identified areas of overlap and disagreement among these viewpoints; and reviewed effects of previous fish consumption advisories. Methods: We reviewed published scientific literature, public health guidelines, and advisories related to fish consumption, focusing on advisories targeted at U.S. populations. However, our conclusions apply to groups having similar fish consumption patterns. Discussion: There are many possible combinations of matters related to fish consumption, but few, if any, fish consumption patterns optimize all domains. Fish provides a rich source of protein and other nutrients, but because of contamination by methylmercury and other toxicants, higher fish intake often leads to greater toxicant exposure. Furthermore, stocks of wild fish are not adequate to meet the nutrient demands of the growing world population, and fish consumption choices also have a broad economic impact on the fishing industry. Most guidance does not account for ecological and economic impacts of different fish consumption choices. Conclusion: Despite the relative lack of information integrating the health, ecological, and economic impacts of different fish choices, clear and simple guidance is necessary to effect desired changes. Thus, more comprehensive advice can be developed to describe the multiple impacts of fish consumption. In addition, policy and fishery management inter-ventions will be necessary to ensure long-term availability of fish as an important source of human nutrition. PMID:22534056

  1. Life-history diversity and its importance to population stability and persistence of a migratory fish: steelhead in two large North American watersheds.

    Science.gov (United States)

    Moore, Jonathan W; Yeakel, Justin D; Peard, Dean; Lough, Jeff; Beere, Mark

    2014-09-01

    Life-history strategies can buffer individuals and populations from environmental variability. For instance, it is possible that asynchronous dynamics among different life histories can stabilize populations through portfolio effects. Here, we examine life-history diversity and its importance to stability for an iconic migratory fish species. In particular, we examined steelhead (Oncorhynchus mykiss), an anadromous and iteroparous salmonid, in two large, relatively pristine, watersheds, the Skeena and Nass, in north-western British Columbia, Canada. We synthesized life-history information derived from scales collected from adult steelhead (N = 7227) in these watersheds across a decade. These migratory fishes expressed 36 different manifestations of the anadromous life-history strategy, with 16 different combinations of freshwater and marine ages, 7·6% of fish performing multiple spawning migrations, and up to a maximum of four spawning migrations per lifetime. Furthermore, in the Nass watershed, various life histories were differently prevalent through time - three different life histories were the most prevalent in a given year, and no life history ever represented more than 45% of the population. These asynchronous dynamics among life histories decreased the variability of numerical abundance and biomass of the aggregated population so that it was > 20% more stable than the stability of the weighted average of specific life histories: evidence of a substantial portfolio effect. Year of ocean entry was a key driver of dynamics; the median correlation coefficient of abundance of life histories that entered the ocean the same year was 2·5 times higher than the median pairwise coefficient of life histories that entered the ocean at different times. Simulations illustrated how different elements of life-history diversity contribute to stability and persistence of populations. This study provides evidence that life-history diversity can dampen fluctuations in

  2. Analysis of hepatic deiodinase 2 mRNA levels in natural fish lake populations exposed to different levels of putative thyroid disrupters

    International Nuclear Information System (INIS)

    Jarque, Sergio; Bosch, Carme; Casado, Marta; Grimalt, Joan O.; Raldúa, Demetrio; Piña, Benjamin

    2014-01-01

    Hepatic mRNA levels of the dio2 gene (deiodinase 2), implicated in thyroid hormone homeostasis, were analyzed in trout from six remote lakes in the Pyrenees (Spain) and the Tatra Mountains (Slovakia). Highest levels corresponded to fish from the two coldest lakes in Pyrenees, whereas relatively low levels were found in the Tatra lakes. These values correlated with the presence of highly-brominated polybrominated diphenyl ethers (PBDE) congeners in the muscle of the same animals, reflecting the distribution of these compounds across European mountain ranges. In contrast, cyp1a expression levels, diagnostic for the presence of dioxin-like pollutants, mirrored the distribution of semi-volatile organochlorine compounds, indicating the specificity of the two types of biological responses. Exposure to PDBEs is known to increase transcription of dio2 and other thyroid-related genes in laboratory experiments; we propose that our data reflects the same phenomenon in natural populations, driven by anthropogenic pollutants at the environmental concentrations. - Highlights: • Hepatic deiodinase 2 (dio2) mRNA levels vary among mountain lake trout populations. • High dio2 expression correlated with elevated levels of PBDE 153 and 154 in muscle. • Expression patterns of dio2 and cyp1a diverge among the same fish populations. • Elevated biological responses associated to high loads of specific pollutants. • These data indicate that thyroid disruption may occur in remote ecosystems. - Deionidase dio2 expression as a marker for exposure to putative thyroid disruptors in mountain lake trout

  3. Population connectivity and the effectiveness of marine protected areas to protect vulnerable, exploited and endemic coral reef fishes at an endemic hotspot

    KAUST Repository

    Van Der Meer, Martin H.

    2014-12-23

    Marine protected areas (MPAs) aim to mitigate anthropogenic impacts by conserving biodiversity and preventing overfishing. The effectiveness of MPAs depends on population connectivity patterns between protected and non-protected areas. Remote islands are endemism hotspots for coral reef fishes and provide rare examples of coral reefs with limited fishing pressure. This study explored population genetic connectivity across a network of protected and non-protected areas for the endemic wrasse, Coris bulbifrons, which is listed as “vulnerable” by the IUCN due to its small, decreasing geographic range and declining abundance. Mitochondrial DNA (mtDNA) and microsatellite DNA (msatDNA) markers were used to estimate historic and contemporary gene flow to determine the level of population self-replenishment and to measure genetic and genotypic diversity among all four locations in the species range (south-west Pacific Ocean)—Middleton Reef (MR), Elizabeth Reef (ER), Lord Howe Island (LHI) and Norfolk Island (NI). MPAs exist at MR and LHI and are limited or non-existent at ER and NI, respectively. There was no obvious differentiation in mtDNA among locations, however, msatDNA revealed differentiation between the most peripheral (NI) and all remaining locations (MR, ER and LHI). Despite high mtDNA connectivity (M = 259–1,144), msatDNA connectivity was limited (M = 3–9) with high self-replenishment (68–93 %) at all locations. NI is the least connected and heavily reliant on self-replenishment, and the absence of MPAs at NI needs to be rectified to ensure the persistence of endemic species at this location. Other endemic fishes exhibit similar patterns of high self-replenishment across the four locations, indicating that a single spatial management approach consisting of a MPA network protecting part of each location could provide reasonable protection for these species. Thus, the existing network of MPAs at this endemic hotspot appears adequate at some locations

  4. Population connectivity and the effectiveness of marine protected areas to protect vulnerable, exploited and endemic coral reef fishes at an endemic hotspot

    Science.gov (United States)

    van der Meer, M. H.; Berumen, M. L.; Hobbs, J.-P. A.; van Herwerden, L.

    2015-06-01

    Marine protected areas (MPAs) aim to mitigate anthropogenic impacts by conserving biodiversity and preventing overfishing. The effectiveness of MPAs depends on population connectivity patterns between protected and non-protected areas. Remote islands are endemism hotspots for coral reef fishes and provide rare examples of coral reefs with limited fishing pressure. This study explored population genetic connectivity across a network of protected and non-protected areas for the endemic wrasse, Coris bulbifrons, which is listed as "vulnerable" by the IUCN due to its small, decreasing geographic range and declining abundance. Mitochondrial DNA (mtDNA) and microsatellite DNA (msatDNA) markers were used to estimate historic and contemporary gene flow to determine the level of population self-replenishment and to measure genetic and genotypic diversity among all four locations in the species range (south-west Pacific Ocean)—Middleton Reef (MR), Elizabeth Reef (ER), Lord Howe Island (LHI) and Norfolk Island (NI). MPAs exist at MR and LHI and are limited or non-existent at ER and NI, respectively. There was no obvious differentiation in mtDNA among locations, however, msatDNA revealed differentiation between the most peripheral (NI) and all remaining locations (MR, ER and LHI). Despite high mtDNA connectivity ( M = 259-1,144), msatDNA connectivity was limited ( M = 3-9) with high self-replenishment (68-93 %) at all locations. NI is the least connected and heavily reliant on self-replenishment, and the absence of MPAs at NI needs to be rectified to ensure the persistence of endemic species at this location. Other endemic fishes exhibit similar patterns of high self-replenishment across the four locations, indicating that a single spatial management approach consisting of a MPA network protecting part of each location could provide reasonable protection for these species. Thus, the existing network of MPAs at this endemic hotspot appears adequate at some locations, but not

  5. Diet, reproduction and population structure of the introduced Amazonian fish Cichla piquiti (Perciformes: Cichlidae) in the Cachoeira Dourada reservoir (Paranaíba River, central Brazil)

    OpenAIRE

    Ferraz Luiz, Tatiane; Roquetti Velludo, Marcela; Carvalho Peret, Alberto; Rodrigues Filho, Jorge Luiz; Moldenhauer Peret, André

    2011-01-01

    The Blue Peacock Bass (Cichla piquiti), native to the Tocantins-Araguaia river basin of the Amazon system, was introduced into the basin of the Paranaíba River, Paraná River system. Cachoeira Dourada reservoir is one of a series of dams on the Paranaíba River in central Brazil, where this fish has become established. A study of its feeding spectrum, combined with information about its reproductive characteristics and population structure, would enable the current state of this species in the ...

  6. How systematic age underestimation can impede understanding of fish population dynamics: Lessons learned from a Lake Superior cisco stock

    Science.gov (United States)

    Yule, D.L.; Stockwell, J.D.; Black, J.A.; Cullis, K.I.; Cholwek, G.A.; Myers, J.T.

    2008-01-01

    Systematic underestimation of fish age can impede understanding of recruitment variability and adaptive strategies (like longevity) and can bias estimates of survivorship. We suspected that previous estimates of annual survival (S; range = 0.20-0.44) for Lake Superior ciscoes Coregonus artedi developed from scale ages were biased low. To test this hypothesis, we estimated the total instantaneous mortality rate of adult ciscoes from the Thunder Bay, Ontario, stock by use of cohort-based catch curves developed from commercial gill-net catches and otolith-aged fish. Mean S based on otolith ages was greater for adult females (0.80) than for adult males (0.75), but these differences were not significant. Applying the results of a study of agreement between scale and otolith ages, we modeled a scale age for each otolith-aged fish to reconstruct catch curves. Using modeled scale ages, estimates of S (0.42 for females, 0.36 for males) were comparable with those reported in past studies. We conducted a November 2005 acoustic and midwater trawl survey to estimate the abundance of ciscoes when the fish were being harvested for roe. Estimated exploitation rates were 0.085 for females and 0.025 for males, and the instantaneous rates of fishing mortality were 0.089 for females and 0.025 for males. The instantaneous rates of natural mortality were 0.131 and 0.265 for females and males, respectively. Using otolith ages, we found that strong year-classes at large during November 2005 were caught in high numbers as age-1 fish in previous annual bottom trawl surveys, whereas weak or absent year-classes were not. For decades, large-scale fisheries on the Great Lakes were allowed to operate because ciscoes were assumed to be short lived and to have regular recruitment. We postulate that the collapse of these fisheries was linked in part to a misunderstanding of cisco biology driven by scale-ageing error. ?? Copyright by the American Fisheries Society 2008.

  7. Mercury exposure through fish consumption in riparian populations at reservoir Guri, using nuclear techniques, Bolivar State, Venezuela

    International Nuclear Information System (INIS)

    Bermudez, Dario; Gali, Gladys; Milano, S.; Paolini, J.; Venegas, Gladys; Carvajal, M.; Marquez, Oscar

    2002-01-01

    In the reservoir Guri located at the south of Venezuela in Bolivar State has occurred the bioaccumulation process. Several studies have demonstrated it. In samples of 42 specimens of carnivorous trophic level, the average value of total mercury was 1.90 mg/g with a maximum of 6.04 mg/g. As first job it was necessary to identify and classify the infrastructures of each town according to their use due to the lack of updated demographic information. In this investigation is described the home characteristics with relation to its residence conditions and work status of home bosses through the design and application of a survey by home in two communities nearby reservoir Guri: 'La Paragua' and 'El Manteco'. A simple questionnaire was also designed and applied where home bosses were asked for the weekly frequency of consumption of fish, especially those of carnivorous habits as well as the quantity in grams consumed per week. Homes were better structured at 'La Paragua' than at 'El Manteco' but in the latest the monthly income by home was bigger nevertheless, it does not meet the requirements of the basic basket in Venezuela of US $ 323 for a four people family. The overall consumption of fish per week was twice higher at 'El Manteco' (1,485 kg) than at 'La Paragua' (678 kg). The fish specie consumed as first priority at 'La Paragua' was Prochilodus rubrotaeniatus ('Coporo') which is of detritivorous alimentary habits while the second more consumed was Cichla ocellaris ('Pavon') of carnivorous alimentary habits. On the opposite side, at 'El Manteco' the first priority of fish was Cichla ocellaris ('Pavon') while the second one was for Prochilodus rubrotaeniatus ('Coporo'). Next step will be the organic mercury analysis in hair samples and the nutritional profile in individuals from the selected homes: 36 at 'La Paragua' and 50 at 'El Manteco' towns. (author)

  8. Life history inhomogeneity in Baltic Sea whitefish populations revealed by otolith strontium signatures – identification of stocked fish

    Directory of Open Access Journals (Sweden)

    Henry Hägerstrand

    2015-11-01

    The strontium concentrations in the otolith cores of whitefish from River Tornionjoki were higher than that of the four otoliths with low core strontium from fishes caught at sea (Table 1. Supposing that this latter group represent stocked fish raised in freshwater ponds, the vast majority of River Tornionjoki whitefish is naturally reproduced fish. This is plausible because in River Tornionjoki, the major whitefish spawning river in Finland, no larger stocking have been made since 1990s (Jokikokko and Huhmarniemi 2014. In conclusion, the concentration of otolith core strontium differs in whitefish hatched in fresh-water and in whitefish hatched in river water or in brackish Baltic Sea water. This difference can be used to reveal stocked whitefish. Barium concentration may be an even better indicator in this respect than strontium, as previous results indicate (Hägerstrand et al., 2015. Stocked river spawning whitefish appear in large amount at the southern feeding grounds around the Åland Islands, as already indicated by e.g. Leskelä et al. (2009.

  9. Dietary exposure to perfluoroalkyl acids of specific French adult sub-populations: High seafood consumers, high freshwater fish consumers and pregnant women

    International Nuclear Information System (INIS)

    Yamada, A.; Bemrah, N.; Veyrand, B.; Pollono, C.; Merlo, M.; Desvignes, V.; Sirot, V.

    2014-01-01

    Perfluoroalkyl acids (PFAAs) are globally found in various media, including food and especially fishery products. In the present study, the dietary exposure to 15 perfluoroalkyl acids was assessed for 3 French adult populations, namely high seafood consumers, high freshwater fish consumers, and pregnant women. Purified food extracts were analysed by LC–MS/MS and PFBA, PFPA, PFHxA, PFHpA, PFOA, PFNA, PFDA, PFUnA, PFTrDA, PFTeDA, PFBS, PFHxS, PFHpS, PFOS and PFDS were monitored and quantified according to the isotope dilution principle. Under lower bound (LB) hypothesis (i.e. contamination values < LOD considered as 0), high freshwater fish consumers appear as the most exposed to PFOS (7.5 ng.kg −1 bw.d −1 ), PFUnA (1.3 ng.kg −1 bw.d −1 ), PFDA (0.4 ng.kg −1 bw.d −1 ) and PFHpS (0.03 ng.kg −1 bw.d −1 ) while high seafood consumers appear as the most exposed to PFOA (1.2 ng.kg −1 bw.d −1 ), PFNA (0.2 ng.kg −1 bw.d −1 ) and PFHxS (0.06 ng.kg −1 bw.d −1 ). For all considered populations, the major exposure contributors are fish, seafood and water under LB hypothesis, while dairy products, bread and crispbread are the main contributors under upper bound (UB) hypothesis. Besides this food exposure assessment, further studies are needed to assess the more global PFAA exposure, taking into account indoor and outdoor air, dust and cutaneous contact, which could be other important contributors for this particular class of chemicals. - Highlights: • The dietary exposure was estimated for 15 perfluoroalkyl acids. • Despite the overestimation, the FFQ remains useful to evaluate the whole diet. • The high fish consumers are the most dietary exposed population. • Fishery products are the main exposure contributors under LB hypothesis

  10. Dietary exposure to perfluoroalkyl acids of specific French adult sub-populations: High seafood consumers, high freshwater fish consumers and pregnant women

    Energy Technology Data Exchange (ETDEWEB)

    Yamada, A., E-mail: ami.s.yamada@gmail.com [Risk Assessment Directorate, French Agency for Food, Environmental and Occupational Health and Safety (ANSES), 27-31 avenue du Général Leclerc, Maisons-Alfort 94701 (France); Bemrah, N., E-mail: nawel.bemrah@anses.fr [Risk Assessment Directorate, French Agency for Food, Environmental and Occupational Health and Safety (ANSES), 27-31 avenue du Général Leclerc, Maisons-Alfort 94701 (France); Veyrand, B., E-mail: bruno.veyrand@oniris-nantes.fr [LUNAM Université, Oniris, Laboratoire d' Etude des Résidus et Contaminants dans les Aliments (LABERCA), USC INRA 1329, Nantes 44307 (France); Pollono, C., E-mail: charles.pollono@oniris-nantes.fr [LUNAM Université, Oniris, Laboratoire d' Etude des Résidus et Contaminants dans les Aliments (LABERCA), USC INRA 1329, Nantes 44307 (France); Merlo, M., E-mail: mathilde.merlo@anses.fr [Risk Assessment Directorate, French Agency for Food, Environmental and Occupational Health and Safety (ANSES), 27-31 avenue du Général Leclerc, Maisons-Alfort 94701 (France); Desvignes, V., E-mail: virginie.desvignes@anses.fr [Risk Assessment Directorate, French Agency for Food, Environmental and Occupational Health and Safety (ANSES), 27-31 avenue du Général Leclerc, Maisons-Alfort 94701 (France); Sirot, V., E-mail: sirotv@gmail.com [Risk Assessment Directorate, French Agency for Food, Environmental and Occupational Health and Safety (ANSES), 27-31 avenue du Général Leclerc, Maisons-Alfort 94701 (France); and others

    2014-09-01

    Perfluoroalkyl acids (PFAAs) are globally found in various media, including food and especially fishery products. In the present study, the dietary exposure to 15 perfluoroalkyl acids was assessed for 3 French adult populations, namely high seafood consumers, high freshwater fish consumers, and pregnant women. Purified food extracts were analysed by LC–MS/MS and PFBA, PFPA, PFHxA, PFHpA, PFOA, PFNA, PFDA, PFUnA, PFTrDA, PFTeDA, PFBS, PFHxS, PFHpS, PFOS and PFDS were monitored and quantified according to the isotope dilution principle. Under lower bound (LB) hypothesis (i.e. contamination values < LOD considered as 0), high freshwater fish consumers appear as the most exposed to PFOS (7.5 ng.kg{sup −1} bw.d{sup −1}), PFUnA (1.3 ng.kg{sup −1} bw.d{sup −1}), PFDA (0.4 ng.kg{sup −1} bw.d{sup −1}) and PFHpS (0.03 ng.kg{sup −1} bw.d{sup −1}) while high seafood consumers appear as the most exposed to PFOA (1.2 ng.kg{sup −1} bw.d{sup −1}), PFNA (0.2 ng.kg{sup −1} bw.d{sup −1}) and PFHxS (0.06 ng.kg{sup −1} bw.d{sup −1}). For all considered populations, the major exposure contributors are fish, seafood and water under LB hypothesis, while dairy products, bread and crispbread are the main contributors under upper bound (UB) hypothesis. Besides this food exposure assessment, further studies are needed to assess the more global PFAA exposure, taking into account indoor and outdoor air, dust and cutaneous contact, which could be other important contributors for this particular class of chemicals. - Highlights: • The dietary exposure was estimated for 15 perfluoroalkyl acids. • Despite the overestimation, the FFQ remains useful to evaluate the whole diet. • The high fish consumers are the most dietary exposed population. • Fishery products are the main exposure contributors under LB hypothesis.

  11. Data-Limited Population-Status Evaluation of Two Coastal Fishes in Southern Angola Using Recreational Catch Length-Frequency Data.

    Science.gov (United States)

    Beckensteiner, Jennifer; Kaplan, David M; Potts, Warren M; Santos, Carmen V; O'Farrell, Michael R

    2016-01-01

    Excessive truncation of a population's size structure is often identified as an important deleterious effect of exploitation, yet the effect on population persistence of size-structure truncation caused by exploitation is often not quantified due to data limitations. In this study, we estimate changes in eggs per recruit (EPR) using annual length-frequency samples over a 9 year period to assess persistence of the two most important recreational fishes in southern Angola: west coast dusky kob (Argyrosomus coronus) and leerfish (Lichia amia). Using a length- and age-structured model, we improve on an existing method to fit this type of model to length-frequency data and estimate EPR. The objectives of the methodological changes are to add flexibility and robustness to the approach for assessing population status in data-limited situations. Results indicate that dusky kob presents very low levels of EPR (5%-10% of the per recruit reproductive capacity in the absence of fishing) in 2013, whereas large inter-annual variability in leerfish estimates suggest caution must be applied when drawing conclusions about its exploitation status. Using simulated length frequency data with known parameter values, we demonstrate that recruitment decline due to overexploitation leads to overestimation of EPR values. Considering the low levels of EPR estimated for the study species, recruitment limitation is not impossible and true EPR values may be even lower than our estimates. It is, therefore, likely that management action, such as the creation of Marine Protected Areas, is needed to reconstitute the west coast dusky kob population.

  12. Fish allergy: in review.

    Science.gov (United States)

    Sharp, Michael F; Lopata, Andreas L

    2014-06-01

    Globally, the rising consumption of fish and its derivatives, due to its nutritional value and divergence of international cuisines, has led to an increase in reports of adverse reactions to fish. Reactions to fish are not only mediated by the immune system causing allergies, but are often caused by various toxins and parasites including ciguatera and Anisakis. Allergic reactions to fish can be serious and life threatening and children usually do not outgrow this type of food allergy. The route of exposure is not only restricted to ingestion but include manual handling and inhalation of cooking vapors in the domestic and occupational environment. Prevalence rates of self-reported fish allergy range from 0.2 to 2.29 % in the general population, but can reach up to 8 % among fish processing workers. Fish allergy seems to vary with geographical eating habits, type of fish processing, and fish species exposure. The major fish allergen characterized is parvalbumin in addition to several less well-known allergens. This contemporary review discusses interesting and new findings in the area of fish allergy including demographics, novel allergens identified, immunological mechanisms of sensitization, and innovative approaches in diagnosing and managing this life-long disease.

  13. Water-level fluctuations and metapopulation dynamics as drivers of genetic diversity in populations of three Tanganyikan cichlid fish species.

    Science.gov (United States)

    Nevado, B; Mautner, S; Sturmbauer, C; Verheyen, E

    2013-08-01

    Understanding how genetic variation is generated and maintained in natural populations, and how this process unfolds in a changing environment, remains a central issue in biological research. In this work, we analysed patterns of genetic diversity from several populations of three cichlid species from Lake Tanganyika in parallel, using the mitochondrial DNA control region. We sampled populations inhabiting the littoral rocky habitats in both very deep and very shallow areas of the lake. We hypothesized that the former would constitute relatively older, more stable and genetically more diverse populations, because they should have been less severely affected by the well-documented episodes of dramatic water-level fluctuations. In agreement with our predictions, populations of all three species sampled in very shallow shorelines showed traces of stronger population growth than populations of the same species inhabiting deep shorelines. However, contrary to our working hypothesis, we found a significant trend towards increased genetic diversity in the younger, demographically less stable populations inhabiting shallow areas, in comparison with the older and more stable populations inhabiting the deep shorelines. We interpret this finding as the result of the establishment of metapopulation dynamics in the former shorelines, by the frequent perturbation and reshuffling of individuals between populations due to the lake-level fluctuations. The repeated succession of periods of allopatric separation and secondary contact is likely to have further increased the rapid pace of speciation in lacustrine cichlids. © 2013 John Wiley & Sons Ltd.

  14. Gendered Disparities in Quality of Cataract Surgery in a Marginalised Population in Pakistan: The Karachi Marine Fishing Communities Eye and General Health Survey.

    Directory of Open Access Journals (Sweden)

    Khabir Ahmad

    Full Text Available Marine fishing communities are among the most marginalised and hard-to-reach groups and have been largely neglected in health research. We examined the quality of cataract surgery and its determinants, with an emphasis on gender, in marine fishing communities in Karachi, Pakistan, using multiple indicators of performance.The Karachi Marine Fishing Communities Eye and General Health Survey was a door-to-door, cross-sectional study conducted between March 2009 and April 2010 in fishing communities living on 7 islands and in coastal areas in Keamari, Karachi, located on the Arabian Sea. A population-based sample of 638 adults, aged ≥ 50 years, was studied. A total of 145 eyes (of 97 persons had undergone cataract surgery in this sample. Cataract surgical outcomes assessed included vision (presenting and best-corrected with a reduced logMAR chart, satisfaction with surgery, astigmatism, and pupil shape. Overall, 65.5% of the operated eyes had some form of visual loss (presenting visual acuity [PVA] < 6/12. 55.2%, 29.0%, and 15.9% of these had good, borderline, and poor visual outcomes based on presenting vision; with best correction, these values were: 68.3 %, 18.6%, and 13.1%, respectively. Of 7 covariates evaluated in the multivariable generalized estimating equations (GEE analyses, gender was the only significant independent predictor of visual outcome. Women's eyes were nearly 4.38 times more likely to have suboptimal visual outcome (PVA<6/18 compared with men's eyes (adjusted odds ratio 4.38, 95% CI 1.96-9.79; P<0.001 after adjusting for the effect of household financial status. A higher proportion of women's than men's eyes had an irregular pupil (26.5% vs. 14.8% or severe/very severe astigmatism (27.5% vs. 18.2%. However, these differences did not reach statistical significance. Overall, more than one fourth (44/144 of cataract surgeries resulted in dissatisfaction. The only significant predictor of satisfaction was visual outcome (P <0

  15. Fish Commoditization: Sustainability Strategies to Protect Living Fish

    Science.gov (United States)

    Lam, Mimi E.; Pitcher, Tony J.

    2012-01-01

    The impacts of early fishing on aquatic ecosystems were minimal, as primitive technologies were used to harvest fish primarily for food. As fishing technology grew more sophisticated and human populations dispersed and expanded, local economies transitioned from subsistence to barter and trade. Expanded trade networks and mercantilization led to…

  16. Fish and hydroelectricity

    International Nuclear Information System (INIS)

    Zorpette, G.

    1990-01-01

    This paper reports on the problems that hydroelectric plants have regarding fish populations. The utilities that operate these plants are finding that accommodating migrating fish presents unique engineering challenges, not the least of which involves designing and building systems to protect fish species whose migratory behavior remains something of a mystery. Where such systems cannot be built, the status of hydroelectric dams may be in doubt, as is now the case with several dams in the United States. A further twist in some regions in the possibility that certain migratory fish will be declared threatened or endangered-a development that could wreak havoc on the hydroelectric energy supply in those regions

  17. Constrained noninformative priors

    International Nuclear Information System (INIS)

    Atwood, C.L.

    1994-10-01

    The Jeffreys noninformative prior distribution for a single unknown parameter is the distribution corresponding to a uniform distribution in the transformed model where the unknown parameter is approximately a location parameter. To obtain a prior distribution with a specified mean but with diffusion reflecting great uncertainty, a natural generalization of the noninformative prior is the distribution corresponding to the constrained maximum entropy distribution in the transformed model. Examples are given

  18. Why fishing magnifies fluctuations in fish abundance.

    Science.gov (United States)

    Anderson, Christian N K; Hsieh, Chih-hao; Sandin, Stuart A; Hewitt, Roger; Hollowed, Anne; Beddington, John; May, Robert M; Sugihara, George

    2008-04-17

    It is now clear that fished populations can fluctuate more than unharvested stocks. However, it is not clear why. Here we distinguish among three major competing mechanisms for this phenomenon, by using the 50-year California Cooperative Oceanic Fisheries Investigations (CalCOFI) larval fish record. First, variable fishing pressure directly increases variability in exploited populations. Second, commercial fishing can decrease the average body size and age of a stock, causing the truncated population to track environmental fluctuations directly. Third, age-truncated or juvenescent populations have increasingly unstable population dynamics because of changing demographic parameters such as intrinsic growth rates. We find no evidence for the first hypothesis, limited evidence for the second and strong evidence for the third. Therefore, in California Current fisheries, increased temporal variability in the population does not arise from variable exploitation, nor does it reflect direct environmental tracking. More fundamentally, it arises from increased instability in dynamics. This finding has implications for resource management as an empirical example of how selective harvesting can alter the basic dynamics of exploited populations, and lead to unstable booms and busts that can precede systematic declines in stock levels.

  19. Enzymes in Fermented Fish.

    Science.gov (United States)

    Giyatmi; Irianto, H E

    Fermented fish products are very popular particularly in Southeast Asian countries. These products have unique characteristics, especially in terms of aroma, flavor, and texture developing during fermentation process. Proteolytic enzymes have a main role in hydrolyzing protein into simpler compounds. Fermentation process of fish relies both on naturally occurring enzymes (in the muscle or the intestinal tract) as well as bacteria. Fermented fish products processed using the whole fish show a different characteristic compared to those prepared from headed and gutted fish. Endogenous enzymes like trypsin, chymotrypsin, elastase, and aminopeptidase are the most involved in the fermentation process. Muscle tissue enzymes like cathepsins, peptidases, transaminases, amidases, amino acid decarboxylases, glutamic dehydrogenases, and related enzymes may also play a role in fish fermentation. Due to the decreased bacterial number during fermentation, contribution of microbial enzymes to proteolysis may be expected prior to salting of fish. Commercial enzymes are supplemented during processing for specific purposes, such as quality improvement and process acceleration. In the case of fish sauce, efforts to accelerate fermentation process and to improve product quality have been studied by addition of enzymes such as papain, bromelain, trypsin, pepsin, and chymotrypsin. © 2017 Elsevier Inc. All rights reserved.

  20. Spatio-temporal dynamics of a fish predator: Density-dependent and hydrographic effects on Baltic Sea cod population.

    Directory of Open Access Journals (Sweden)

    Valerio Bartolino

    Full Text Available Understanding the mechanisms of spatial population dynamics is crucial for the successful management of exploited species and ecosystems. However, the underlying mechanisms of spatial distribution are generally complex due to the concurrent forcing of both density-dependent species interactions and density-independent environmental factors. Despite the high economic value and central ecological importance of cod in the Baltic Sea, the drivers of its spatio-temporal population dynamics have not been analytically investigated so far. In this paper, we used an extensive trawl survey dataset in combination with environmental data to investigate the spatial dynamics of the distribution of the Eastern Baltic cod during the past three decades using Generalized Additive Models. The results showed that adult cod distribution was mainly affected by cod population size, and to a minor degree by small-scale hydrological factors and the extent of suitable reproductive areas. As population size decreases, the cod population concentrates to the southern part of the Baltic Sea, where the preferred more marine environment conditions are encountered. Using the fitted models, we predicted the Baltic cod distribution back to the 1970s and a temporal index of cod spatial occupation was developed. Our study will contribute to the management and conservation of this important resource and of the ecosystem where it occurs, by showing the forces shaping its spatial distribution and therefore the potential response of the population to future exploitation and environmental changes.

  1. Application of fisheries management techniques to assessing impacts: task I report. [Assessment of chemical, radiological, and thermal impacts of nuclear power plants on fish populations

    Energy Technology Data Exchange (ETDEWEB)

    McKenzie, D.H.; Baker, K.S.; Fickeisen, D.H.; Metzger, R.M.; Skalski, J.R.

    1979-03-01

    Task I efforts examined the available fisheries management techniques and assessed their potential application in a confirmatory monitoring program. The objective of such monitoring programs is to confirm that the prediction of an insignificant impact (usually made in the FES) was correct. Fisheries resource managers have developed several tools for assessing the fish population response to stress (exploitation) and they were thought potentially useful for detecting nuclear power plant impacts. Techniques in three categories were examined; catch removal, population dynamics, and nondestructive censuses, and the report contains their description, examples of application, advantages, and disadvantages. The techniques applied at nuclear power plant sites were examined in detail to provide information on implementation and variability of specific approaches. The most suitable techniques to incorporate into a monitoring program confirming no impact appear to be those based on Catch Per Unity Effort (CPUE) and hydroacoustic data. In some specific cases, age and growth studies and indirect census techniques may be beneficial. Recommendations for task II efforts to incorporate these techniques into monitoring program designs are presented. These include development of guidelines for; (1) designing and implementing a data collection program; (2) interpreting these data and assessing the occurrence of impact, and (3) establishment of the monitoring program's ability to detect changes in the affected populations.

  2. Population distribution of flexible molecules from maximum entropy analysis using different priors as background information: application to the Φ, Ψ-conformational space of the α-(1-->2)-linked mannose disaccharide present in N- and O-linked glycoproteins.

    Science.gov (United States)

    Säwén, Elin; Massad, Tariq; Landersjö, Clas; Damberg, Peter; Widmalm, Göran

    2010-08-21

    The conformational space available to the flexible molecule α-D-Manp-(1-->2)-α-D-Manp-OMe, a model for the α-(1-->2)-linked mannose disaccharide in N- or O-linked glycoproteins, is determined using experimental data and molecular simulation combined with a maximum entropy approach that leads to a converged population distribution utilizing different input information. A database survey of the Protein Data Bank where structures having the constituent disaccharide were retrieved resulted in an ensemble with >200 structures. Subsequent filtering removed erroneous structures and gave the database (DB) ensemble having three classes of mannose-containing compounds, viz., N- and O-linked structures, and ligands to proteins. A molecular dynamics (MD) simulation of the disaccharide revealed a two-state equilibrium with a major and a minor conformational state, i.e., the MD ensemble. These two different conformation ensembles of the disaccharide were compared to measured experimental spectroscopic data for the molecule in water solution. However, neither of the two populations were compatible with experimental data from optical rotation, NMR (1)H,(1)H cross-relaxation rates as well as homo- and heteronuclear (3)J couplings. The conformational distributions were subsequently used as background information to generate priors that were used in a maximum entropy analysis. The resulting posteriors, i.e., the population distributions after the application of the maximum entropy analysis, still showed notable deviations that were not anticipated based on the prior information. Therefore, reparameterization of homo- and heteronuclear Karplus relationships for the glycosidic torsion angles Φ and Ψ were carried out in which the importance of electronegative substituents on the coupling pathway was deemed essential resulting in four derived equations, two (3)J(COCC) and two (3)J(COCH) being different for the Φ and Ψ torsions, respectively. These Karplus relationships are denoted

  3. Population-specific gene expression in the plant pathogenic nematode Heterodera glycines exists prior to infection and during the onset of a resistant or susceptible reaction in the roots of the Glycine max genotype Peking

    Directory of Open Access Journals (Sweden)

    Alkharouf Nadim W

    2009-03-01

    Full Text Available Abstract Background A single Glycine max (soybean genotype (Peking reacts differently to two different populations of Heterodera glycines (soybean cyst nematode within the first twelve hours of infection during resistant (R and susceptible (S reactions. This suggested that H. glycines has population-specific gene expression signatures. A microarray analysis of 7539 probe sets representing 7431 transcripts on the Affymetrix® soybean GeneChip® were used to identify population-specific gene expression signatures in pre-infective second stage larva (pi-L2 prior to their infection of Peking. Other analyses focused on the infective L2 at 12hours post infection (i-L212h, and the infective sedentary stages at 3days post infection (i-L23d and 8days post infection (i-L2/L38d. Results Differential expression and false discovery rate (FDR analyses comparing populations of pi-L2 (i.e., incompatible population, NL1-RHg to compatible population, TN8 identified 71 genes that were induced in NL1-RHg as compared to TN8. These genes included putative gland protein G23G12, putative esophageal gland protein Hgg-20 and arginine kinase. The comparative analysis of pi-L2 identified 44 genes that were suppressed in NL1-RHg as compared to TN8. These genes included a different Hgg-20 gene, an EXPB1 protein and a cuticular collagen. By 12 h, there were 7 induced genes and 0 suppressed genes in NL1-RHg. By 3d, there were 9 induced and 10 suppressed genes in NL1-RHg. Substantial changes in gene expression became evident subsequently. At 8d there were 13 induced genes in NL1-RHg. This included putative gland protein G20E03, ubiquitin extension protein, putative gland protein G30C02 and β-1,4 endoglucanase. However, 1668 genes were found to be suppressed in NL1-RHg. These genes included steroid alpha reductase, serine proteinase and a collagen protein. Conclusion These analyses identify a genetic expression signature for these two populations both prior to and subsequently

  4. Fishing down the largest coral reef fish species.

    Science.gov (United States)

    Fenner, Douglas

    2014-07-15

    Studies on remote, uninhabited, near-pristine reefs have revealed surprisingly large populations of large reef fish. Locations such as the northwestern Hawaiian Islands, northern Marianas Islands, Line Islands, U.S. remote Pacific Islands, Cocos-Keeling Atoll and Chagos archipelago have much higher reef fish biomass than islands and reefs near people. Much of the high biomass of most remote reef fish communities lies in the largest species, such as sharks, bumphead parrots, giant trevally, and humphead wrasse. Some, such as sharks and giant trevally, are apex predators, but others such as bumphead parrots and humphead wrasse, are not. At many locations, decreases in large reef fish species have been attributed to fishing. Fishing is well known to remove the largest fish first, and a quantitative measure of vulnerability to fishing indicates that large reef fish species are much more vulnerable to fishing than small fish. The removal of large reef fish by fishing parallels the extinction of terrestrial megafauna by early humans. However large reef fish have great value for various ecological roles and for reef tourism. Copyright © 2014 Elsevier Ltd. All rights reserved.

  5. Joint genome-wide prediction in several populations accounting for randomness of genotypes: A hierarchical Bayes approach. I: Multivariate Gaussian priors for marker effects and derivation of the joint probability mass function of genotypes.

    Science.gov (United States)

    Martínez, Carlos Alberto; Khare, Kshitij; Banerjee, Arunava; Elzo, Mauricio A

    2017-03-21

    It is important to consider heterogeneity of marker effects and allelic frequencies in across population genome-wide prediction studies. Moreover, all regression models used in genome-wide prediction overlook randomness of genotypes. In this study, a family of hierarchical Bayesian models to perform across population genome-wide prediction modeling genotypes as random variables and allowing population-specific effects for each marker was developed. Models shared a common structure and differed in the priors used and the assumption about residual variances (homogeneous or heterogeneous). Randomness of genotypes was accounted for by deriving the joint probability mass function of marker genotypes conditional on allelic frequencies and pedigree information. As a consequence, these models incorporated kinship and genotypic information that not only permitted to account for heterogeneity of allelic frequencies, but also to include individuals with missing genotypes at some or all loci without the need for previous imputation. This was possible because the non-observed fraction of the design matrix was treated as an unknown model parameter. For each model, a simpler version ignoring population structure, but still accounting for randomness of genotypes was proposed. Implementation of these models and computation of some criteria for model comparison were illustrated using two simulated datasets. Theoretical and computational issues along with possible applications, extensions and refinements were discussed. Some features of the models developed in this study make them promising for genome-wide prediction, the use of information contained in the probability distribution of genotypes is perhaps the most appealing. Further studies to assess the performance of the models proposed here and also to compare them with conventional models used in genome-wide prediction are needed. Copyright © 2017 Elsevier Ltd. All rights reserved.

  6. Puerto Rico Commercial Fishermen Census (2008): This dataset contains demographic, fishing practices and fishing boat and gear data about the population of active commercial fishermen in Puerto Rico (CRCP).

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Data contains information on demographics, fishing practices and vessel gear characteristics of Puerto Rican commercial fishermen

  7. Fish Allergy

    Science.gov (United States)

    ... Safe Videos for Educators Search English Español Fish Allergy KidsHealth / For Parents / Fish Allergy What's in this ... Print en español Alergia al pescado About Fish Allergy A fish allergy is not exactly the same ...

  8. Lessons learned from practical approaches to reconcile mismatches between biological population structure and stock units of marine fish

    NARCIS (Netherlands)

    Kerr, Lisa A.; Hintzen, Niels T.; Cadrin, Steven X.; Clausen, Lotte Worsøe; Dickey-Collas, Mark; Goethel, Daniel R.; Hatfield, Emma M.C.; Kritzer, Jacob P.; Nash, Richard D.M.

    2016-01-01

    Recent advances in the application of stock identification methods have revealed inconsistencies between the spatial structure of biological populations and the definition of stock units used in assessment and management. From a fisheries management perspective, stocks are typically assumed to be

  9. Evolutionary mechanisms shaping the genetic population structure of marine fishes; lessons from the European flounder ( Platichthys flesus L.)

    DEFF Research Database (Denmark)

    Hansen, Jakob Hemmer; Eg Nielsen, Einar; Grønkjær, P.

    2007-01-01

    with the extreme isolation of the island population at the Faroe Islands. A sharp genetic break was associated with a change in life history from pelagic to benthic spawners in the Baltic Sea. Partial Mantel tests showed that geographical distance per se was not related with genetic structuring among Atlantic...

  10. Strong population genetic structuring in an annual fish, Nothobranchius furzeri, suggests multiple savannah refugia in southern Mozambique

    Czech Academy of Sciences Publication Activity Database

    Bartáková, V.; Reichard, M.; Janko, Karel; Polačik, M.; Blažek, R.; Reichwald, K.; Cellerino, A.; Bryja, J.

    2013-01-01

    Roč. 13, č. 196 (2013), s. 1-15 ISSN 1471-2148 Institutional support: RVO:67985904 Keywords : temporary pool * pyhlogeography * population genetics Subject RIV: EG - Zoology Impact factor: 3.407, year: 2013 http://www.biomedcentral.com/1471-2148/13/196

  11. Fishing effects on energy use by North Sea fishes

    NARCIS (Netherlands)

    Jennings, S.; Hal, van R.; Hiddink, J.G.; Maxwell, T.A.D.

    2008-01-01

    Fishing affects patterns of energy use in fish populations, as demonstrated by changes in population energy consumption and the size and age when energy demands are greatest. We compare theoretical predictions and observed patterns of energy use (expressed as the primary production required to

  12. What is the carrying capacity for fish in the ocean? A meta analysis of population dynamics of North Atlantic cod

    DEFF Research Database (Denmark)

    Myers, R.A.; MacKenzie, Brian; Bowen, K.G.

    2001-01-01

    used empirical Bayes techniques to estimate the maximum reproductive rate and carrying capacity of each stock. In all cases, the empirical Bayes estimates were biologically reasonable, whereas a stock by stock analysis occasionally yielded nonsensical parameter estimates (e.g., infinite values). Our...... analysis showed that the carrying capacity per unit area varied by more than 20-fold among populations and that much of this variation was related to temperature. That is, the carrying capacity per square kilometre declines as temperature increases....

  13. Assessing power plant impacts on fish populations at Northeast Utilities sites: winter flounder studies at Millstone Nuclear Power Station

    International Nuclear Information System (INIS)

    Lorda, E.; Danila, D.J.; Miller, J.D.; Bireley, L.E.; Jacobsen, P.M.

    1987-01-01

    An historical view is presented of the various impact assessment approaches used to study the winter flounder, including efforts to identify and quantify compensation and to model its population dynamics. This review illustrates the need for unbiased estimates of basic life history parameters and power plant related mortalities if compensatory mechanisms are to be understood and if impact assessments are to be meaningful. 67 references, 19 figures, 10 tables

  14. Locally adapted fish populations maintain small-scale genetic differentiation despite perturbation by a catastrophic flood event.

    Science.gov (United States)

    Plath, Martin; Hermann, Bernd; Schröder, Christiane; Riesch, Rüdiger; Tobler, Michael; García de León, Francisco J; Schlupp, Ingo; Tiedemann, Ralph

    2010-08-23

    Local adaptation to divergent environmental conditions can promote population genetic differentiation even in the absence of geographic barriers and hence, lead to speciation. Perturbations by catastrophic events, however, can distort such parapatric ecological speciation processes. Here, we asked whether an exceptionally strong flood led to homogenization of gene pools among locally adapted populations of the Atlantic molly (Poecilia mexicana, Poeciliidae) in the Cueva del Azufre system in southern Mexico, where two strong environmental selection factors (darkness within caves and/or presence of toxic H2S in sulfidic springs) drive the diversification of P. mexicana. Nine nuclear microsatellites as well as heritable female life history traits (both as a proxy for quantitative genetics and for trait divergence) were used as markers to compare genetic differentiation, genetic diversity, and especially population mixing (immigration and emigration) before and after the flood. Habitat type (i.e., non-sulfidic surface, sulfidic surface, or sulfidic cave), but not geographic distance was the major predictor of genetic differentiation. Before and after the flood, each habitat type harbored a genetically distinct population. Only a weak signal of individual dislocation among ecologically divergent habitat types was uncovered (with the exception of slightly increased dislocation from the Cueva del Azufre into the sulfidic creek, El Azufre). By contrast, several lines of evidence are indicative of increased flood-induced dislocation within the same habitat type, e.g., between different cave chambers of the Cueva del Azufre. The virtual absence of individual dislocation among ecologically different habitat types indicates strong natural selection against migrants. Thus, our current study exemplifies that ecological speciation in this and other systems, in which extreme environmental factors drive speciation, may be little affected by temporary perturbations, as adaptations

  15. Strong population genetic structuring in an annual fish, Nothobranchius furzeri, suggests multiple savannah refugia in southern Mozambique

    Czech Academy of Sciences Publication Activity Database

    Bartáková, Veronika; Reichard, Martin; Janko, Karel; Polačik, Matej; Blažek, Radim; Reichwald, K.; Cellerino, A.; Bryja, Josef

    2013-01-01

    Roč. 13, č. 196 (2013), s. 196 ISSN 1471-2148 R&D Projects: GA ČR GA206/09/0815; GA ČR GBP505/12/G112 Institutional support: RVO:68081766 Keywords : Temporary pool * Phylogeography * Population genetics * Cyprinodontiformes * Senescence * Pluvials * Pleistocene climate changes * Dispersal * Founder effect * Killifish Subject RIV: EG - Zoology Impact factor: 3.407, year: 2013 http://www.biomedcentral.com/1471-2148/13/196

  16. Genetic population structure of turbot ( Scophthalmus maximus L.) supports the presence of multiple hybrid zones for marine fishes in the transition zone between the Baltic Sea and the North Sea

    DEFF Research Database (Denmark)

    Eg Nielsen, Einar; Nielsen, P.H.; Meldrup, Dorte

    2004-01-01

    Sea, suggesting high gene flow among populations in these areas. In contrast, there was a sharp cline in genetic differentiation going from the low saline Baltic Sea to the high saline North Sea. The data were explained best by two divergent populations connected by a hybrid zone; however......, a mechanical mixing model could not be ruled out. A significant part of the genetic variance could be ascribed to variation among years within locality. Nevertheless, the population structure was relatively stable over time, suggesting that the observed pattern of genetic differentiation is biologically...... significant. This study suggests that hybrid zones are a common phenomenon for marine fishes in the transition area between the North Sea and the Baltic Sea and highlights the importance of using interspecific comparisons for inferring population structure in high gene flow species such as most marine fishes....

  17. Climate Change and Genetic Structure of Leading Edge and Rear End Populations in a Northwards Shifting Marine Fish Species, the Corkwing Wrasse (Symphodus melops).

    Science.gov (United States)

    Knutsen, Halvor; Jorde, Per Erik; Gonzalez, Enrique Blanco; Robalo, Joana; Albretsen, Jon; Almada, Vitor

    2013-01-01

    One mechanism by which marine organisms may respond to climate shifts is range shifts. The corkwing wrasse (Symphodus melops) is a temperate fish species, inhabiting the coasts of Europe, that show strong indications of current as well as historical (ice-age) range shifts towards the north. Nine neutral microsatellite DNA markers were screened to study genetic signatures and spatial population structure over the entire geographic and thermal gradient of the species from Portugal to Norway. A major genetic break (F ST  = 0.159 average among pairs) was identified between Scandinavian and more southern populations, with a marked reduction (30% or more) in levels of genetic variability in Scandinavia. The break is probably related to bottleneck(s) associated with post-glacial colonization of the Scandinavian coasts, and indicates a lack of present gene flow across the North Sea. The lack of gene flow can most likely be attributed to the species' need for rocky substrate for nesting and a relatively short pelagic larval phase, limiting dispersal by ocean currents. These findings demonstrate that long-distance dispersal may be severely limited in the corkwing wrasse, and that successful range-shifts following present climate change may be problematic for this and other species with limited dispersal abilities, even in the seemingly continuous marine environment.

  18. Fish allergy and fish allergens

    DEFF Research Database (Denmark)

    Kuehn, A; Hilger, Christiane; Ollert, Markus

    2016-01-01

    Fish is one of the main elicitors for food allergies. For a long time, the clinical picture of fish allergy was reduced to the following features. First, fish-allergic patients suffer from a high IgE cross-reactivity among fishes so that they have to avoid all species. Second, clinically relevant...... symptoms are linked to the presence of IgE-antibodies recognizing parvalbumin, the fish panallergen. This view was challenged by results from recent studies as follows. 1. Allergic reactions which are limited to single or several fish species (mono-or oligosensitisations) apply not only to single cases...... but patients with this phenotype constitute an important sub-group among fish-allergic individuals. 2. Newly identified fish allergens, enolases, aldolases, and fish gelatin, are of high relevance as the majority of the fish-allergic individuals seem to develop specific IgE against these proteins. The present...

  19. Guidelines for use of fishes in research

    Science.gov (United States)

    Use of Fishes in Research Committee (joint committee of the American Fisheries Society, the American Institute of Fishery Research Biologists

    2014-01-01

    The 2004 and 2014 Guidelines were developed to provide a structure that advances appropriate attention toward valid experimental designs and procedures with aquatic animals while ensuring humane treatment of the experimental subjects. At a practical level, the Guidelines are intended to provide general recommendations on field and laboratory endeavors, such as sampling, holding, and handling fishes; to offer information on administrative matters, including regulations and permits; and to address typical ethical concerns, such as perceptions of pain or discomfort experienced by experimental subjects. These Guidelines must be recognized as guidelines. They are not intended to provide detailed instructions but rather to alert investigators to a broad array of topics and concerns to consider prior to initiating study. At a comprehensive level, the principles upon which these Guidelines are based are broadly applicable, and many of the described practices and approaches can be adapted to situations involving other aquatic animal species and conditions. Understanding the differences between fishes and other vertebrates, especially mammals, is critically important to conducting scientifically sound research with fishes. Disparities in life histories and mortality rates in fishes versus other vertebrates are critical in designing sustainable sampling levels in fish populations. The UFR Committee points out that (1) compared to mammalian populations, adult populations of many fish species persist despite very high natural mortality rates in juvenile stages by virtue of the fact that most species lay thousands or tens of thousands of eggs; (2) because of these mortality patterns, research on fishes, especially field research or research on early life stages, can involve, and often requires, much larger numbers of research subjects than does research on mammals; and (3) the animal handling and husbandry requirements for fishes are fundamentally different from those for

  20. The Prior-project

    DEFF Research Database (Denmark)

    Engerer, Volkmar Paul; Roued-Cunliffe, Henriette; Albretsen, Jørgen

    digitisation of Arthur Prior’s Nachlass kept in the Bodleian Library, Oxford. The DH infrastructure in question is the Prior Virtual Lab (PVL). PVL was established in 2011 in order to provide researchers in the field of temporal logic easy access to the papers of Arthur Norman Prior (1914-1969), and officially......In this paper, we present a DH research infrastructure which relies heavily on a combination of domain knowledge with information technology. The general goal is to develop tools to aid scholars in their interpretations and understanding of temporal logic. This in turn is based on an extensive...

  1. Arthur Prior and 'Now'

    DEFF Research Database (Denmark)

    Blackburn, Patrick Rowan; Jørgensen, Klaus Frovin

    2016-01-01

    ’s search led him through the work of Castañeda, and back to his own work on hybrid logic: the first made temporal reference philosophically respectable, the second made it technically feasible in a modal framework. With the aid of hybrid logic, Prior built a bridge from a two-dimensional UT calculus...

  2. Prior Knowledge Assessment Guide

    Science.gov (United States)

    2014-12-01

    assessment in a reasonable amount of time. Hands-on assessments can be extremely diverse in makeup and administration depending on the subject matter...DEVELOPING AND USING PRIOR KNOWLEDGE ASSESSMENTS TO TAILOR TRAINING D-3 ___ Brush and scrub ___ Orchards ___ Rice

  3. Great Lakes prey fish populations: a cross-basin overview of status and trends based on bottom trawl surveys, 1978-2013

    Science.gov (United States)

    Gorman, Owen T.; Weidel, Brian C.

    2014-01-01

    The assessment of Great Lakes prey fish stocks have been conducted annually with bottom trawls since the 1970s by the Great Lakes Science Center, sometimes assisted by partner agencies. These stock assessments provide data on the status and trends of prey fish that are consumed by important commercial and recreational fishes. Although all these annual surveys are conducted using bottom trawls, they differ among the lakes in the proportion of the lake covered, seasonal timing, trawl gear used, and the manner in which the trawl is towed (across or along bottom contours). Because each assessment is unique, population indices were standardized to the highest value for a time series within each lake for the following prey species: Cisco (Coregonus artedi), Bloater (C. hoyi), Rainbow Smelt (Osmerus mordax), Alewife (Alosa pseudoharengus), and Round Goby (Neogobius melanostomus). In this report, standardized indices are presented in graphical form along with synopses to provide a short, informal cross-basin summary of the status and trends of principal prey fishes. There was basin-wide agreement in the trends of age-1 and older biomass for all prey species, with the highest concordance occurring for coregonids and Rainbow Smelt, and weaker concordance for Alewife. For coregonids, the highest biomass occurred from the mid-1980s to the mid-1990s. Rainbow Smelt biomass declined slowly and erratically during the last quarter century. Alewife biomass was generally higher from the early 1980s through 1990s across the Great Lakes, but since the early 1990s, trends have been divergent across the lakes, though there has been a downward trend in all lakes since 2005. Recently, Lake Huron has shown resurgence in biomass of Bloater, achieving 75% of its maximum record in 2012 due to recruitment of a succession of strong and moderate year classes that appeared in 2005-2011. Also, strong recruitment of the 2010 year class of Alewife has led to a sharp increase in biomass of Alewife in

  4. Diet, reproduction and population structure of the introduced Amazonian fish Cichla piquiti (Perciformes: Cichlidae in the Cachoeira Dourada reservoir (Paranaíba River, central Brazil

    Directory of Open Access Journals (Sweden)

    Tatiane Ferraz Luiz

    2011-06-01

    Full Text Available The Blue Peacock Bass (Cichla piquiti, native to the Tocantins-Araguaia river basin of the Amazon system, was introduced into the basin of the Paranaíba River, Paraná River system. Cachoeira Dourada reservoir is one of a series of dams on the Paranaíba River in central Brazil, where this fish has become established. A study of its feeding spectrum, combined with information about its reproductive characteristics and population structure, would enable the current state of this species in the reservoir to be assessed and might provide useful data for the management of other species native to this habitat. This study showed that the peacock bass has no predators or natural competitors in the reservoir and that reproduces continuously, with high reproductive rates, and has a smaller median length at first maturity (L50 than other species of Cichla. Its successful establishment in habitats strongly affected by human activity should cause changes in the whole structure of the local fish communities. Nonetheless, in this reservoir, there appears to be some sharing of the functions of this species with native carnivorous fish, a situation that may be sustained by the presence of a wide variety of foraging fish. Rev. Biol. Trop. 59 (2: 727-741. Epub 2011 June 01.El pez tucunaré (Cichla piquiti, nativo del sistema de la cuenca del rio Tocantins-Araguaia, fue introducido en la cuenca del río Paranaíba, parte del sistema del río Paraná. En este ecosistema trófico de planicie aluvial, las relaciones entre comunidades de peces están definidas por diferentes factores que pueden ser modificados debido a la represa del río, y da como resultado grandes cambios en la interacción biológica en éstos hábitats. La represa de Cachoeira Dourada forma parte de una serie de represas en el río Paranaíba en el Brasil central, donde el tucunaré se ha establecido. Una investigación sobre su espectro alimentario, combinado con información sobre sus caracter

  5. 2005 Annual Synthesis Report, Pallid Sturgeon Population Assessment Program and Associated Fish Community Monitoring for the Missouri River

    Energy Technology Data Exchange (ETDEWEB)

    Oldenburg, Eric W.; Hanrahan, Timothy P.; Harnish, Ryan A.; Bellgraph, Brian J.; Duncan, Joanne P.; Allwardt, Craig H.

    2008-08-12

    Pallid sturgeon, Scaphirhynchus albus, have declined throughout the Missouri River since dam construction and inception of the Bank Stabilization and Navigation Project in 1912. Their decline likely is due to the loss and degradation of their natural habitat as a result of changes in the river’s structure and function, as well as the pallid sturgeon’s inability to adapt to these changes. The U. S. Army Corps of Engineers has been working with state and federal agencies to develop and conduct a Pallid Sturgeon Monitoring and Assessment Program (Program), with the goal of recovering pallid sturgeon populations. The Program has organized the monitoring and assessment efforts into distinct geographic segments, with state and federal resource management agencies possessing primary responsibility for one or more segment. To date, the results from annual monitoring have been reported for individual Program segments. However, monitoring results have not been summarized or evaluated for larger spatial scales, encompassing more than one Program segment. This report describes a summary conducted by the Pacific Northwest National Laboratory (PNNL) that synthesizes the 2005 sampling year monitoring results from individual segments.

  6. 2006 Annual Synthesis Report, Pallid Sturgeon Population Assessment Program and Associated Fish Community Monitoring for the Missouri River

    Energy Technology Data Exchange (ETDEWEB)

    Oldenburg, Eric W.; Hanrahan, Timothy P.; Harnish, Ryan A.; Bellgraph, Brian J.; Duncan, Joanne P.; Allwardt, Craig H.

    2008-08-12

    Pallid sturgeon, Scaphirhynchus albus, have declined throughout the Missouri River since dam construction and inception of the Bank Stabilization and Navigation Project in 1912. Their decline likely is due to the loss and degradation of their natural habitat as a result of changes in the river’s structure and function, as well as the pallid sturgeon’s inability to adapt to these changes. The U. S. Army Corps of Engineers has been working with state and federal agencies to develop and conduct a Pallid Sturgeon Monitoring and Assessment Program (Program), with the goal of recovering pallid sturgeon populations. The Program has organized the monitoring and assessment efforts into distinct geographic segments, with state and federal resource management agencies possessing primary responsibility for one or more segment. To date, the results from annual monitoring have been reported for individual Program segments. However, monitoring results have not been summarized or evaluated for larger spatial scales, encompassing more than one Program segment. This report describes a summary conducted by the Pacific Northwest National Laboratory (PNNL) that synthesizes the 2006 sampling year monitoring results from individual segments.

  7. Biochemical genetics of some Indian fishes

    Digital Repository Service at National Institute of Oceanography (India)

    Menezes, M.R.; Qasim, S.Z.

    similarities in their protein make up, whereas these taxonomically apart showed striking differences. Thus, the usefulness of employing this method was clearly demonstrated in fish taxonomy. The study of genetic struture of fish populations through the analysis...

  8. At the forefront: evidence of the applicability of using environmental DNA to quantify the abundance of fish populations in natural lentic waters with additional sampling considerations

    Science.gov (United States)

    Klobucar, Stephen L.; Rodgers, Torrey W.; Budy, Phaedra

    2017-01-01

    Environmental DNA (eDNA) sampling has proven to be a valuable tool for detecting species in aquatic ecosystems. Within this rapidly evolving field, a promising application is the ability to obtain quantitative estimates of relative species abundance based on eDNA concentration rather than traditionally labor-intensive methods. We investigated the relationship between eDNA concentration and Arctic char (Salvelinus alpinus) abundance in five well-studied natural lakes; additionally, we examined the effects of different temporal (e.g., season) and spatial (e.g., depth) scales on eDNA concentration. Concentrations of eDNA were linearly correlated with char population estimates ( = 0.78) and exponentially correlated with char densities ( = 0.96 by area; 0.82 by volume). Across lakes, eDNA concentrations were greater and more homogeneous in the water column during mixis; however, when stratified, eDNA concentrations were greater in the hypolimnion. Overall, our findings demonstrate that eDNA techniques can produce effective estimates of relative fish abundance in natural lakes. These findings can guide future studies to improve and expand eDNA methods while informing research and management using rapid and minimally invasive sampling.

  9. Population growth, trophic level, and reproductive biology of two congeneric archer fishes (Toxotes chatareus, Hamilton 1822 and Toxotes jaculatrix, Pallas 1767) inhabiting Malaysian coastal waters.

    Science.gov (United States)

    Simon, K D; Bakar, Y; Samat, A; Zaidi, C C; Aziz, A; Mazlan, A G

    2009-12-01

    Population growth, trophic level, and some aspects of reproductive biology of two congeneric archer fish species, Toxotes chatareus and Toxotes jaculatrix, collected from Johor coastal waters, Malaysia, were studied. Growth pattern by length-weight relationship (W=aL(b)) for the sexes differed, and exhibited positive allometric growth (male, female and combined sexes of T. chatareus; female and combined sexes of T. jaculatrix) and isometric growth (male samples of T. jaculatrix only). Trophic levels of both species were analyzed based on 128 specimens. The results show that, in both species, crustaceans and insects were the most abundant prey items, and among crustaceans the red clawed crab Sesarma bidens and Formicidae family insects were the most represented taxa. The estimated mean trophic levels for T. chatareus and T. jaculatrix were 3.422+/-0.009 and 3.420+/-0.020, respectively, indicating that they are largely carnivores. Fecundity of T. chatareus ranged from 38 354 to 147 185 eggs for females with total length ranging from 14.5 to 22.5 cm and total body weight from 48.7 to 270.2 g, and T. jaculatrix 25 251 to 150 456 eggs for females with total length ranging from 12.2 to 23.0 cm and total body weight from 25.7 to 275.0 g. Differences in values of gonadosomatic and hepatosomatic indexes calculated for both species in this study may have resulted from uneven sample size ranges.

  10. A randomized trial of fish oil omega-3 fatty acids on arterial health, inflammation, and metabolic syndrome in a young healthy population

    Science.gov (United States)

    2013-01-01

    Background Long chain omega-3 fatty acids from fish oils (O3) are known to have beneficial effects on a number of vascular risk factors in at-risk populations. The effects of a highly bioavailable emulsified preparation on an overweight young adult population are less well known. Methods Young adults, age 18–30, with body mass indices (BMIs) greater than 23 (average = 28.1) were administered 1.7 g of O3 per day (N = 30) or safflower oil placebo (N = 27) in an emulsified preparation (Coromega, Inc.) for 4 weeks in a double-blind randomized design. Blood was drawn and anthropometric measurements taken before and after dosing. Hemodynamic measures (central pulse wave velocity, augmentation index, and aortic systolic blood pressure), inflammatory cytokines (IL-6, IL-8, IL-10, and tumor necrosis factor-α), red blood cell and plasma phospholipid fatty acid profiles, fasting serum lipids, glucose, and C-reactive protein were measured. Results Red cell and plasma phospholipid eicosapentaenoic acid and docosahexaenoic acid concentrations increased over the four weeks of dosing in the O3 group. Dosing with O3 did not affect central pulse wave velocity, augmentation index, or aortic systolic blood pressure. None of the five American Heart Association metabolic syndrome components improved over the dosing period. None of the inflammatory cytokines, C-reactive protein, or lipids (total or LDL cholesterol) improved over the dosing period. Conclusions No salutary effects of O3 were observed in hemodynamic, metabolic syndrome criteria or inflammatory markers as a result of this relatively short period of administration in this relatively overweight, but healthy young adult cohort. PMID:23565815

  11. Body growth and reproduction of individuals of the sciaenid fish Stellifer rastrifer in a shallow tropical bight: A cautionary tale for assumptions regarding population parameters

    Science.gov (United States)

    Pombo, Maíra; Denadai, Márcia Regina; Turra, Alexander

    2013-05-01

    Knowledge of population parameters and the ability to predict their responses to environmental changes are useful tools to aid in the appropriate management and conservation of natural resources. Samples of the sciaenid fish Stellifer rastrifer were taken from August 2003 through October 2004 in shallow areas of Caraguatatuba Bight, southeastern Brazil. The results showed a consistent presence of length-frequency classes throughout the year and low values of the gonadosomatic index of this species, indicating that the area is not used for spawning or residence of adults, but rather shelters individuals in late stages of development. The results may serve as a caveat for assessments of transitional areas such as the present one, the nursery function of which is neglected compared to estuaries and mangroves. The danger of mismanaging these areas by not considering their peculiarities is emphasized by using these data as a study case for the development of some broadly used population-parameter analyses. The individuals' body growth parameters from the von Bertalanffy model were estimated based on the most common approaches, and the best values obtained from traditional quantification methods of selection were very prone to bias. The low gonadosomatic index (GSI) estimated during the period was an important factor in stimulating us to select more reliable parameters of body growth (L∞ = 20.9, K = 0.37 and Z = 2.81), which were estimated based on assuming the existence of spatial segregation by size. The data obtained suggest that the estimated mortality rate included a high rate of migration of older individuals to deeper areas, where we assume that they completed their development.

  12. Assessments of fish catch composition of marine artisanal fishery in ...

    African Journals Online (AJOL)

    Fish is a major source of protein in human diets. Fish demand has been on the increase due to increase in human population which has resulted to wide gap between fish demand and supply. This study was carried out to elucidate the major fish species that are economically important in the study area. Assessment of fish ...

  13. Fishing degrades size structure of coral reef fish communities.

    Science.gov (United States)

    Robinson, James P W; Williams, Ivor D; Edwards, Andrew M; McPherson, Jana; Yeager, Lauren; Vigliola, Laurent; Brainard, Russell E; Baum, Julia K

    2017-03-01

    Fishing pressure on coral reef ecosystems has been frequently linked to reductions of large fishes and reef fish biomass. Associated impacts on overall community structure are, however, less clear. In size-structured aquatic ecosystems, fishing impacts are commonly quantified using size spectra, which describe the distribution of individual body sizes within a community. We examined the size spectra and biomass of coral reef fish communities at 38 US-affiliated Pacific islands that ranged in human presence from near pristine to human population centers. Size spectra 'steepened' steadily with increasing human population and proximity to market due to a reduction in the relative biomass of large fishes and an increase in the dominance of small fishes. Reef fish biomass was substantially lower on inhabited islands than uninhabited ones, even at inhabited islands with the lowest levels of human presence. We found that on populated islands size spectra exponents decreased (analogous to size spectra steepening) linearly with declining biomass, whereas on uninhabited islands there was no relationship. Size spectra were steeper in regions of low sea surface temperature but were insensitive to variation in other environmental and geomorphic covariates. In contrast, reef fish biomass was highly sensitive to oceanographic conditions, being influenced by both oceanic productivity and sea surface temperature. Our results suggest that community size structure may be a more robust indicator than fish biomass to increasing human presence and that size spectra are reliable indicators of exploitation impacts across regions of different fish community compositions, environmental drivers, and fisheries types. Size-based approaches that link directly to functional properties of fish communities, and are relatively insensitive to abiotic variation across biogeographic regions, offer great potential for developing our understanding of fishing impacts in coral reef ecosystems. © 2016

  14. Selective analysis of power plant operation on the Hudson River with emphasis on the Bowline Point Generating Station. Volume 2. [Multiple impact of power plant once-through cooling systems on fish populations

    Energy Technology Data Exchange (ETDEWEB)

    Barnthouse, L. W.; Cannon, J. B.; Christensen, S. G.

    1977-07-01

    Because of the location of the Bowline, Roseton, and Indian Point power generating facilities in the low-salinity zone of the Hudson estuary, operation of these plants with the present once-through cooling systems will adversely influence the fish populations that use the area for spawning and initial periods of growth and development. Recruitment rates and standing crops of several fish species may be lowered in response to the increased mortality caused by entrainment of nonscreenable eggs and larvae and by impingement of screenable young of the year. Entrainment and impingement data are particularly relevant for assessing which fish species have the greatest potential for being adversely affected by operation of Bowline, Roseton, and Indian Point with once-through cooling. These data from each of these three plants suggest that the six species that merit the greatest consideration are striped bass, white perch, tomcod, alewife, blueback herring, and bay anchovy. Two points of view are available for assessing the relative importance of the fish species in the Hudson River. From the fisheries point of view, the only two species of major importance are striped bass and shad. From the fish-community and ecosystem point of view, the dominant species, as determined by seasonal and regional standing crops (in numbers and biomass per hectare), are the six species most commonly entrained and impinged, namely, striped bass, white perch, tomcod, alewife, blueback herring, and anchovy.

  15. Effect of dietary fish oil supplements alone or in combination with sunflower and linseed oil on ruminal lipid metabolism and bacterial populations in lactating cows.

    Science.gov (United States)

    Kairenius, P; Leskinen, H; Toivonen, V; Muetzel, S; Ahvenjärvi, S; Vanhatalo, A; Huhtanen, P; Wallace, R J; Shingfield, K J

    2018-04-01

    Fish oil (FO) alters ruminal biohydrogenation causing trans fatty acid (FA) intermediates to accumulate, but the effects of 18-carbon polyunsaturated FA supply on ruminal long-chain FA metabolism and microbial communities in cattle fed FO are not well established. Four cows fitted with rumen cannula were used in a 4 × 4 Latin square with 21-d experimental periods to evaluate the effects of FO alone or in combination with plant oils high in 18:2n-6 or 18:3n-3 on rumen microbial ecology and flow of FA at the omasum. Treatments comprised a basal grass silage-based diet containing no additional oil (control) or supplements of FO (200 g/d) or FO (200 g/d) plus 500 g/d of sunflower oil (SFO) or linseed oil (LFO). Flow of FA was determined using the omasal sampling technique. The relative abundance of key biohydrogenating bacteria was assessed by quantitative PCR on 16S rRNA genes in omasal digesta. Fish oil-supplemented treatments increased the amounts of trans-18:1, trans-18:2, and 20- to 22-carbon polyunsaturated FA escaping the rumen. Relative to the control, oil supplements had no effect on the amount of 18:0 leaving the rumen, but LFO decreased the flow of 18:0 at the omasum compared with SFO. Both SFO and LFO increased trans-18:1 relative to FO, whereas LFO resulted in the highest trans-18:2 and 20- to 22-carbon FA flow. Supplements of FO plus plant oils shifted biohydrogenation toward trans-10 18:1 formation. Compared with FO alone, the ruminal metabolism of 22:6n-3 in the rumen of lactating cows is more extensive on diets containing higher amounts of 18-carbon polyunsaturated FA. However, the biohydrogenation of 22:5n-3 was less extensive in LFO than SFO, but showed no difference between FO and diets containing plant oils. Ruminal outflow of 20:5n-3 was not altered when plant oils were added to FO. Alterations in the amount of intermediates at the omasum or ruminal biohydrogenation pathways were not accompanied by major changes in analyzed bacterial populations

  16. ANALYSIS OF GENETIC DIVERSITY OF GALICIAN CARP POPULATION ON THE BASE OF FISH FARM "VELYKYY LYUBIN´” WITH USING MICROSATELLITE MARKERS

    Directory of Open Access Journals (Sweden)

    I. Yarova

    2017-09-01

    Full Text Available Purpose. To investigate the genetic structure of the Galician carp population using microsatellite DNA markers. Methodology. Blood samples taken from the caudal vein of the specimens of the Galician carp farm "Velykyy Lyubin", Lviv region. (N = 15 persons. When landing, they were labeled with electronic chips of the brand Aqua Pump and A-CHIP. The total DNA was isolated using the standard method, using the Gene JET Whole Blood Genomik DNA Purification Mini Kit (USA. The concentration and quality of DNA were determined on an Eppendorf Bio Photometr biophotometer. To study the genetic structure of the Galician carp population, four microsatellite markers were used: MFW 06, MFW 15, MFW 23, MFW 31. Findings. Blood samples taken from the tail vein of fish (n = 15 oz. Were used as research material. In the course of work, optimal conditions for SSR-PCR analysis have been selected. The conducted studies allowed to determine the factors that have the greatest impact on the amplification efficiency, namely: the concentration of the DNA preparation, the concentration of the primer in the reaction mixture and the number of amplification cycles. In the study group, for all 4 microsatellite loci, only 18 alleles with a molecular weight of 130-343 ng were detected. The number of alleles per locus varied from 3 to 6. The most polymorphous was the locus MFW 23 (6 alleles were detected, and the least polymorphic was the locus MFW 31 (3 alleles were detected. The effective number of alleles in the sample of genotypes studied varied from 2.14 (MFW 31 to 5.23 (MFW 23. According to calculations of allelic frequencies, the main indicators of genetic variability are determined. The maximum level of available heterozygosity is fixed for the MFW 23 locus, the lowest for the MFW locus 31. Originality. For the first time in 65 years the genetic structure of the Galician carp population has been investigated. Practical value. The results will be used in further studies of

  17. Sets of priors reflecting prior-data conflict and agreement

    NARCIS (Netherlands)

    Walter, G.M.; Coolen, F.P.A.; Carvalho, J.P.; Lesot, M.-J.; Kaymak, U.; Vieira, S.; Bouchon-Meunier, B.; Yager, R.R.

    2016-01-01

    Bayesian inference enables combination of observations with prior knowledge in the reasoning process. The choice of a particular prior distribution to represent the available prior knowledge is, however, often debatable, especially when prior knowledge is limited or data are scarce, as then

  18. Population characteristics of channel catfish near the northern edge of their distribution: implications for management

    Science.gov (United States)

    Carter-Lynn, K. P.; Quist, Michael C.

    2015-01-01

    Channel catfish, Ictalurus punctatus (Rafinesque), populations in six lakes in northern Idaho, USA, were sampled to describe their population characteristics. During the summers of 2011 and 2012, 4864 channel catfish were sampled. Channel catfish populations had low to moderate catch rates, and length structure was dominated by fish Channel catfish were in good body condition. All populations were maintained by stocking age-1 or age-2 fish. Growth of fish reared in thermally enriched environments prior to stocking was fast compared to other North American channel catfish populations. After stocking, growth of channel catfish declined rapidly. Once stocked, cold water temperatures, prey resources and (or) genetic capabilities limited growth. Total annual mortality of age 2 and older channel catfish was generally channel catfish population dynamics and highlights important considerations associated with their ecology and management.

  19. Dietary intake of fish, omega-3, omega-6 polyunsaturated fatty acids and vitamin D and the prevalence of psychotic-like symptoms in a cohort of 33,000 women from the general population.

    Science.gov (United States)

    Hedelin, Maria; Löf, Marie; Olsson, Marita; Lewander, Tommy; Nilsson, Björn; Hultman, Christina M; Weiderpass, Elisabete

    2010-05-26

    Low intake of fish, polyunsaturated fatty acids (PUFA) and vitamin D deficiency has been suggested to play a role in the development of schizophrenia. Our aim was to evaluate the association between the intake of different fish species, PUFA and vitamin D and the prevalence of psychotic-like symptoms in a population-based study among Swedish women. Dietary intake was estimated using a food frequency questionnaire among 33,623 women aged 30-49 years at enrollment (1991/92). Information on psychotic-like symptoms was derived from a follow-up questionnaire in the years 2002/03. Participants were classified into three predefined levels: low, middle and high frequency of symptoms. The association between diet and psychotic-like symptoms was summarized in terms of relative risks (RR) and corresponding 95% confidence intervals and was evaluated by energy-adjusted multinomial logistic regression. 18,411 women were classified as having a low level of psychotic-like symptoms, 14 395 as middle and 817 as having a high level. The risk of high level symptoms was 53% (95% CI, 30-69%) lower among women who ate fish 3-4 times per week compared to women who never ate fish. The risk was also lower for women with a high intake of omega-3 and omega-6 PUFA compared to women with a lower intake of these fatty acids. The effect was most pronounced for omega-6 PUFAs. The RR comparing the highest to the lowest quartile of omega-6 PUFAs intake was 0.78 (95% CI, 0.64-0.97). The associations were J-shaped with the strongest reduced risk for an intermediate intake of fish or PUFA. For fatty fish (herring/mackerel, salmon-type fish), the strongest inverse association was found for an intermediate intake (RR: 0.81, 95% CI, 0.66-0.98), whereas a high intake of fatty fish was associated with an increased risk of psychotic-like symptoms (RR: 1.90, 95% CI, 1.34-2.70). Women in the highest compared with the lowest quartile of vitamin D consumption experienced a 37% (95% CI, 22-50%) lower risk of

  20. Dietary intake of fish, omega-3, omega-6 polyunsaturated fatty acids and vitamin D and the prevalence of psychotic-like symptoms in a cohort of 33 000 women from the general population

    Directory of Open Access Journals (Sweden)

    Lewander Tommy

    2010-05-01

    Full Text Available Abstract Background Low intake of fish, polyunsaturated fatty acids (PUFA and vitamin D deficiency has been suggested to play a role in the development of schizophrenia. Our aim was to evaluate the association between the intake of different fish species, PUFA and vitamin D and the prevalence of psychotic-like symptoms in a population-based study among Swedish women. Methods Dietary intake was estimated using a food frequency questionnaire among 33 623 women aged 30-49 years at enrolment (1991/92. Information on psychotic-like symptoms was derived from a follow-up questionnaire in the years 2002/03. Participants were classified into three predefined levels: low, middle and high frequency of symptoms. The association between diet and psychotic-like symptoms was summarized in terms of relative risks (RR and corresponding 95% confidence intervals and was evaluated by energy-adjusted multinomial logistic regression. Results 18 411 women were classified as having a low level of psychotic-like symptoms, 14 395 as middle and 817 as having a high level. The risk of high level symptoms was 53% (95% CI, 30-69% lower among women who ate fish 3-4 times per week compared to women who never ate fish. The risk was also lower for women with a high intake of omega-3 and omega-6 PUFA compared to women with a lower intake of these fatty acids. The effect was most pronounced for omega-6 PUFAs. The RR comparing the highest to the lowest quartile of omega-6 PUFAs intake was 0.78 (95% CI, 0.64-0.97. The associations were J-shaped with the strongest reduced risk for an intermediate intake of fish or PUFA. For fatty fish (herring/mackerel, salmon-type fish, the strongest inverse association was found for an intermediate intake (RR: 0.81, 95% CI, 0.66-0.98, whereas a high intake of fatty fish was associated with an increased risk of psychotic-like symptoms (RR: 1.90, 95% CI, 1.34-2.70. Women in the highest compared with the lowest quartile of vitamin D consumption

  1. Prior indigenous technological species

    Science.gov (United States)

    Wright, Jason T.

    2018-01-01

    One of the primary open questions of astrobiology is whether there is extant or extinct life elsewhere the solar system. Implicit in much of this work is that we are looking for microbial or, at best, unintelligent life, even though technological artefacts might be much easier to find. Search for Extraterrestrial Intelligence (SETI) work on searches for alien artefacts in the solar system typically presumes that such artefacts would be of extrasolar origin, even though life is known to have existed in the solar system, on Earth, for eons. But if a prior technological, perhaps spacefaring, species ever arose in the solar system, it might have produced artefacts or other technosignatures that have survived to present day, meaning solar system artefact SETI provides a potential path to resolving astrobiology's question. Here, I discuss the origins and possible locations for technosignatures of such a prior indigenous technological species, which might have arisen on ancient Earth or another body, such as a pre-greenhouse Venus or a wet Mars. In the case of Venus, the arrival of its global greenhouse and potential resurfacing might have erased all evidence of its existence on the Venusian surface. In the case of Earth, erosion and, ultimately, plate tectonics may have erased most such evidence if the species lived Gyr ago. Remaining indigenous technosignatures might be expected to be extremely old, limiting the places they might still be found to beneath the surfaces of Mars and the Moon, or in the outer solar system.

  2. Accidental close-down of the Trollheim hydropower plant in July 2008. Effects on the fish populations in the river Surna; Utfall av Trollheim kraftverk i juli 2008. Effekter av fiskebestandene i Surna

    Energy Technology Data Exchange (ETDEWEB)

    Forseth, T.; Stickler, M.; Ugedal, O.; Sundt, H.; Bremset, G.; Linnansaari, T.; Hvidsten, N.A.; Harby, A.; Bongard, T.; Alfredsen, K.

    2009-01-15

    An accidental stop in the turbine in the Trollheim Hydropower Plant on 27th July 2008 caused a drop in downstream discharge in the River Surna from 21 to 3 m3/s during 100 min. River discharge was reestablished after three hours. The drop caused large dewatered areas (26 % of total wet area before the drop), but HEC-RAS simulations indicated that the ramping rates were relatively low (less than 20 cm per hour for the whole drop period in the modeled transects). Thus, a high proportion of the fish may have avoided stranding. Stranding mortality was estimated at approximately 14.000 0+ salmon and 3.600 older juveniles (70 % 1+), or the equivalent of approximately 3000 smolts. The loss constitutes less than 3% of the future smolt production downstream the power station (estimated by up-scaling from densities at electrofishing station, via mesohabitats to the whole river stretch) during 2009-2012. About one third of the smolts in the River Surna has been estimated to be produced in areas below the power plant. Between 3000 and 15 000 0+, and an unknown number of older brown trout likely also died from stranding, and the effect was probably larger for the juvenile population of brown trout than Atlantic salmon. All the above estimates are uncertain. Additional releases of water from the reservoir during, and one week after the drop, likely had no effects on the fish populations. The diversity of the zoobenthos communities in the river below the outlet of the power plant is low, likely due to large and frequent variation in discharge. The accidental stop in 2008 was probably particularly damaging, due to the large dewatered areas and low minimum discharge (far below the minimum allowed residual flow at 15 m3/s). This may temporarily reduce biomass and diversity of zoobenthos and thus prey availability for fish. Analysis of discharge data during the period from 2000 to 2008, show that despite measures implemented in the power plant (from 2006), there are several events

  3. Effect of increased intake of fish and mussels on exposure to toxic trace elements in a healthy, middle-aged population

    DEFF Research Database (Denmark)

    Outzen, Malene; Tjønneland, Anne; Larsen, Erik Huusfeldt

    2015-01-01

    Fish and shellfish are rich in essential nutrients, but are also a source of exposure to environmental contaminants. We aimed to investigate the effect of increased fish and mussel intake on mercury, arsenic, lead and cadmium blood concentrations. We randomly assigned 102 healthy men and women (all...... non-smokers) aged 48-76 years to an intervention group (n = 51) or a control group (n = 51). Intervention participants received a high amount of fish and mussels for 26 weeks (1 kg week(-1)). Controls received no intervention and were expected to eat less than 300 g of fish and mussels per week. Whole...

  4. Genome position specific priors for genomic prediction

    DEFF Research Database (Denmark)

    Brøndum, Rasmus Froberg; Su, Guosheng; Lund, Mogens Sandø

    2012-01-01

    casual mutation is different between the populations but affects the same gene. Proportions of a four-distribution mixture for SNP effects in segments of fixed size along the genome are derived from one population and set as location specific prior proportions of distributions of SNP effects...... for the target population. The model was tested using dairy cattle populations of different breeds: 540 Australian Jersey bulls, 2297 Australian Holstein bulls and 5214 Nordic Holstein bulls. The traits studied were protein-, fat- and milk yield. Genotypic data was Illumina 777K SNPs, real or imputed Results...

  5. Fish health and fish quality

    DEFF Research Database (Denmark)

    Ingerslev, Hans-Christian

    Aquaculture is an expanding worldwide industry producing an increasing amount of fish every year. The quality of the fish meat is dependent upon many biological and non-biological factors. Infectious diseases are known to cause bleedings and damage of the muscle tissue that may lead to scarring...... are poorly described in fish. The present work in this thesis focused on: 1) examination of potential changes in the quality regarding texture of the muscle tissue in rainbow trout (Oncorhynchus mykiss) after previous infection with the bacterial pathogens Yersinia ruckeri and Vibrio anguillarum; 2...... of these studies showed that previous infections by Yersinia ruckeri and Vibrio anguillarum gave rise to subsequent changes regarding textural quality parameters in fresh fish meat, while no differences were seen for cold-smoked meat from the same fish. The texture in previous infected fish was less flaky and less...

  6. Population trends, bend use relative to available habitat and within-river-bend habitat use of eight indicator species of Missouri and Lower Kansas River benthic fishes: 15 years after baseline assessment

    Science.gov (United States)

    Wildhaber, Mark L.; Yang, Wen-Hsi; Arab, Ali

    2016-01-01

    A baseline assessment of the Missouri River fish community and species-specific habitat use patterns conducted from 1996 to 1998 provided the first comprehensive analysis of Missouri River benthic fish population trends and habitat use in the Missouri and Lower Yellowstone rivers, exclusive of reservoirs, and provided the foundation for the present Pallid Sturgeon Population Assessment Program (PSPAP). Data used in such studies are frequently zero inflated. To address this issue, the zero-inflated Poisson (ZIP) model was applied. This follow-up study is based on PSPAP data collected up to 15 years later along with new understanding of how habitat characteristics among and within bends affect habitat use of fish species targeted by PSPAP, including pallid sturgeon. This work demonstrated that a large-scale, large-river, PSPAP-type monitoring program can be an effective tool for assessing population trends and habitat usage of large-river fish species. Using multiple gears, PSPAP was effective in monitoring shovelnose and pallid sturgeons, sicklefin, shoal and sturgeon chubs, sand shiner, blue sucker and sauger. For all species, the relationship between environmental variables and relative abundance differed, somewhat, among river segments suggesting the importance of the overall conditions of Upper and Middle Missouri River and Lower Missouri and Kansas rivers on the habitat usage patterns exhibited. Shoal and sicklefin chubs exhibited many similar habitat usage patterns; blue sucker and shovelnose sturgeon also shared similar responses. For pallid sturgeon, the primary focus of PSPAP, relative abundance tended to increase in Upper and Middle Missouri River paralleling stocking efforts, whereas no evidence of an increasing relative abundance was found in the Lower Missouri River despite stocking.

  7. Fish pelleting

    African Journals Online (AJOL)

    PUBLICATIONS1

    fish meal pelletizing machine utilized 4kg of ingredients to produce 3.77kg pellets at an effi- ciency of .... Design and fabrication of fish meal pellet processing machine ... 53 ... horsepower for effective torque application on .... two edges were tacked with a spot weld to hold ... then welded on to the shaft making sure that the.

  8. Fish parasites

    DEFF Research Database (Denmark)

    This book contains 22 chapters on some of the most important parasitic diseases in wild and farmed fish. International experts give updated reviews and provide solutions to the problems......This book contains 22 chapters on some of the most important parasitic diseases in wild and farmed fish. International experts give updated reviews and provide solutions to the problems...

  9. Fish reproduction

    National Research Council Canada - National Science Library

    Rocha, Maria João; Arukwe, Augustine; Kapoor, B. G

    2008-01-01

    ... of reproductive systems is essential for such studies. Fishes comprise over 28,000 species, with a remarkable variability in morphology, physiology and environmental adaptation. Knowledge on fish reproduction is scattered across numerous sources that shows a dynamic research field. The Editors believe it to be an opportune moment for a...

  10. Identification of sole parvalbumin as a major allergen: study of cross-reactivity between parvalbumins in a Spanish fish-allergic population.

    Science.gov (United States)

    Perez-Gordo, M; Cuesta-Herranz, J; Maroto, A S; Cases, B; Ibáñez, M D; Vivanco, F; Pastor-Vargas, C

    2011-05-01

    Fish allergy is becoming an important health problem in Spain, a country with the third highest level of fish consumption after Japan and Portugal. The most common fish allergens are parvalbumins. In our area, the most widely consumed fish species are lean, such as whiff (Lepidorhombus whiffiagonis) and sole (Solea solea). Adverse reactions to fish are usually related to these species, a fact that is largely unknown to allergists in other countries. The aim of this study was to identify and purify the major allergen implicated in allergic response to sole and evaluate the IgE cross-reactivity of purified parvalbumins from whiff and sole, which are phylogenetically close, and more distant species (i.e. cod and salmon). Eighteen Spanish fish-allergic patients with a positive history of type I allergy to fish were recruited from the clinic. Total protein extracts and purified parvalbumins from whiff and sole were tested for their IgE-binding properties by combining two-dimensional Western blotting and mass spectrometry. The extent of cross-reactivity between these parvalbumins along with cod and salmon parvalbumins was investigated by IgE ELISA inhibition assay. An IgE-binding spot of approximately 14 kDa was identified as parvalbumin and confirmed as a major allergen in sole extract, which is recognized by almost 70% of the patients. Whiff parvalbumin was recognized by 83.4% of the patients. High cross-reactivity was determined for all purified parvalbumins by IgE inhibition assay. Sole and whiff parvalbumin were confirmed as major allergens. The parvalbumins of sole, whiff, cod and salmon were highly cross-reactive, thus suggesting a high amino acid sequence identity between them. © 2011 Blackwell Publishing Ltd.

  11. Fishing-gear restrictions and biomass gains for coral reef fishes in marine protected areas.

    Science.gov (United States)

    Campbell, Stuart J; Edgar, Graham J; Stuart-Smith, Rick D; Soler, German; Bates, Amanda E

    2018-04-01

    Considerable empirical evidence supports recovery of reef fish populations with fishery closures. In countries where full exclusion of people from fishing may be perceived as inequitable, fishing-gear restrictions on nonselective and destructive gears may offer socially relevant management alternatives to build recovery of fish biomass. Even so, few researchers have statistically compared the responses of tropical reef fisheries to alternative management strategies. We tested for the effects of fishery closures and fishing gear restrictions on tropical reef fish biomass at the community and family level. We conducted 1,396 underwater surveys at 617 unique sites across a spatial hierarchy within 22 global marine ecoregions that represented 5 realms. We compared total biomass across local fish assemblages and among 20 families of reef fishes inside marine protected areas (MPAs) with different fishing restrictions: no-take, hook-and-line fishing only, several fishing gears allowed, and sites open to all fishing gears. We included a further category representing remote sites, where fishing pressure is low. As expected, full fishery closures, (i.e., no-take zones) most benefited community- and family-level fish biomass in comparison with restrictions on fishing gears and openly fished sites. Although biomass responses to fishery closures were highly variable across families, some fishery targets (e.g., Carcharhinidae and Lutjanidae) responded positively to multiple restrictions on fishing gears (i.e., where gears other than hook and line were not permitted). Remoteness also positively affected the response of community-level fish biomass and many fish families. Our findings provide strong support for the role of fishing restrictions in building recovery of fish biomass and indicate important interactions among fishing-gear types that affect biomass of a diverse set of reef fish families. © 2017 Society for Conservation Biology.

  12. Intake of mercury through fish consumption

    International Nuclear Information System (INIS)

    Sarmani, S.B.; Kiprawi, A.Z.; Ismail, R.B.; Hassan, R.B.; Wood, A.K.; Rahman, S.A.

    1995-01-01

    Fish has been known as a source of non-occupational mercury exposure to fish consuming population groups, and this is shown by the high hair mercury levels. In this study, hair samples collected from fishermen and their families, and commercial marine fishes were analyzed for mercury and methylmercury by neutron activation and gas chromatography. The results showed a correlation between hair mercury levels and fish consumption patterns. The levels of mercury found in this study were similar to those reported by other workers for fish consuming population groups worldwide. (author)

  13. THE CLASSIC WAY OF FISH PROCESSING

    Directory of Open Access Journals (Sweden)

    Đurica Kalember

    1998-04-01

    Full Text Available Today's population faces great difficulties in fish marketing, although it is very valuable food. The classic supply with fresh fish has little influence on its consumption, which is not remarkable anyhow. Therefore one shulud be reminded on the classic, almost forgotten, ways of fish processing that can substantially increase fish assortment and improve its distribution. After cleaning and cutting the fish (primary procedures in its processing, comes salting, after which the salted fish can become an end-product or it can be one of many semi-products in the fish production chain. The most common methods of fish salting are dry-salting, dry-wet-salting (Greek-Dalmatian and wet-salting (pickling. The aim of fish drying is its dehydratation. Our country has the experience of traditional drying, sun-drying and natural drying of fish. Each of these has its own special qualities, depending on the fish species and the drying temperature. Smoked fish gets a very distinctive and spicy aroma and a specific colour. There are two kinds of smoking - cold and warm - based on the smoke derived from burning some special trees or, lately, from smoke preparations. Marinades are old procedures of fish processing in acetic acid and specific spices which can be prepared cold, fried or cooked. Fish-roe of some specific fish species has a special value and is considered a delicacy. The most precious black caviar is derived from the sturgeon roe and some of its related species.

  14. Forecasting Tools Point to Fishing Hotspots

    Science.gov (United States)

    2009-01-01

    Private weather forecaster WorldWinds Inc. of Slidell, Louisiana has employed satellite-gathered oceanic data from Marshall Space Flight Center to create a service that is every fishing enthusiast s dream. The company's FishBytes system uses information about sea surface temperature and chlorophyll levels to forecast favorable conditions for certain fish populations. Transmitting the data to satellite radio subscribers, FishBytes provides maps that guide anglers to the areas they are most likely to make their favorite catch.

  15. Prior Elicitation, Assessment and Inference with a Dirichlet Prior

    Directory of Open Access Journals (Sweden)

    Michael Evans

    2017-10-01

    Full Text Available Methods are developed for eliciting a Dirichlet prior based upon stating bounds on the individual probabilities that hold with high prior probability. This approach to selecting a prior is applied to a contingency table problem where it is demonstrated how to assess the prior with respect to the bias it induces as well as how to check for prior-data conflict. It is shown that the assessment of a hypothesis via relative belief can easily take into account what it means for the falsity of the hypothesis to correspond to a difference of practical importance and provide evidence in favor of a hypothesis.

  16. Use of black carp (Mylopharyngodon piceus) in biological control of intermediate host snails of fish-borne zoonotic trematodes in nursery ponds in the Red River Delta, Vietnam

    DEFF Research Database (Denmark)

    Hung, Nguyen M.; Duc, Nguyen V.; Stauffer, Jay R.

    2013-01-01

    is often thought to be linked to fish culture in areas where the habit of eating raw fish is common. Juvenile fish produced in nurseries are often heavily infected with FZT and since fishes are sold to aquaculture facilities for growth, control of FZT in these fishes should be given priority. Controlling....... Here we report the first trials using it for biological control of intermediate host snails in nursery ponds stocked with 1-week old fry (10-12 mm in length) of Indian carp, Labeo rohita. Methods. Semi-field and field experiments were set up to test the effect of black carp on snail populations....... In the semi-field experiment a known quantity of snails was initially introduced into a pond which was subsequently stocked with black carp. In the field trial in nursery ponds, density of snails was estimated prior to a nursing cycle and at the end of the cycle (after 9 weeks). Results: The results showed...

  17. Impact of prior authorization on the use and costs of lipid-lowering medications among Michigan and Indiana dual enrollees in Medicaid and Medicare: results of a longitudinal, population-based study.

    Science.gov (United States)

    Lu, Christine Y; Law, Michael R; Soumerai, Stephen B; Graves, Amy Johnson; LeCates, Robert F; Zhang, Fang; Ross-Degnan, Dennis; Adams, Alyce S

    2011-01-01

    Some Medicaid programs have adopted prior-authorization (PA) policies that require prescribers to request approval from Medicaid before prescribing drugs not included on a preferred drug list. This study examined the association between PA policies for lipid-lowering agents in Michigan and Indiana and the use and cost of this drug class among dual enrollees in Medicare and Medicaid. Michigan and Indiana claims data from the Centers for Medicare and Medicaid Services were assessed. Michigan Medicaid instituted a PA requirement for several lipid-lowering medications in March 2002; Indiana implemented a PA policy for drugs in this class in September 2002. Although the PA policies affected some statins, they predominantly targeted second-line treatments, including bile acid sequestrants, fibrates, and niacins. Individuals aged ≥18 years who were continuously dually enrolled in both Medicare and Medicaid from July 2000 through September 2003 were included in this longitudinal, population-based study, which included a 20-month observation period before the implementation of PA in Michigan and a 12-month follow-up period after the Indiana PA policy was initiated. Interrupted time series analysis was used to examine changes in prescription rates and pharmacy costs for lipid-lowering drugs before and after policy implementation. A total of 38,684 dual enrollees in Michigan and 29,463 in Indiana were included. Slightly more than half of the cohort were female (Michigan, 53.3% [20,614/38,684]; Indiana, 56.3% [16,595/29,463]); nearly half were aged 45 to 64 years (Michigan, 43.7% [16,921/38,684]; Indiana, 45.2% [13,321/29,463]). Most subjects were white (Michigan, 77.4% [29,957/38,684]; Indiana: 84.9% [25,022/29,463]). The PA policy was associated with an immediate 58% reduction in prescriptions for nonpreferred medications in Michigan and a corresponding increase in prescriptions for preferred agents. However, the PA policy had no apparent effect in Indiana, where there had

  18. [Speech by Oscar Julian Bardeci, director of the Centro Latinoamericano de Demografia (CELADE), at the Latinamerican Regional Meeting prior to the International Conference on Population in recognition of the Second Meeting on Population by the Committee of Upper-Level Government Experts (CEGAN), Havana, Cuba, November 16-19, 1983].

    Science.gov (United States)

    Bardeci, O J

    1983-12-01

    This work examines the relationship between population growth and economic development in Latin America and assesses progress in the 10 years since the Bucharest World Population Conference. The Latin American population increased from about 159 million in 1950 to 275 million in 1970 and around 325 million in 1980. The rate of growth reached a maximum of 2.8%/year in the early 1970s and has now declined to about 2.3%/year. The regional growth rate is a product of population dynamics that differ greatly in individual countries. Crude birth rates declined in every country of Latin America between 1975-80, but still exceeded 40/1000 in 1980-85 in Bolivia, Ecuador, El Salvador, Haiti, Honduras, and Nicaragua. Current fertility is the result of the different trajectories of the demographic transition in different countries. While fertility in Argentina, Cuba, and Uruguay underwent a slow but sustained decline that began prior to 1960, other countries including Colombia, Costa Rica, Chile, and Venezuela began an accelerated fertility decline in the 1960s that diffused rapidly through all age and social groups. Other countries have still not entered a definite phase of fertility decline. Mortality rates have declined appreciably in Latin America in the past few decades although they remain high in some countries. After the end of World War II and until the mid-1970s, most countries of the region experienced rapid economic growth coupled with profound changes in the productive structure. The industrial labor force grew in almost all countries along with urbanization, the decline of agricultural employment, and the increase of the tertiary sector. These and other important economic advances through the mid-1970s occurred despite rapid population growth, and the beginning of the fertility decline coincided with slowing economic growth that saw negative rates in 1981-82. Various studies have shown that not all population sectors were incorporated in the process of economic

  19. Do fish have rights in artisanal fisheries?

    Directory of Open Access Journals (Sweden)

    Mustapha MK

    2013-09-01

    Full Text Available Artisanal fishers in developing world are unaware that fish are capable of suffering or discomfort, though researches have shown that fish do feel pain. Five fish welfare domains have been identified which constitute their rights in their environment. The needs of wild fish are usually provided in their natural, undisturbed and unperturbed aquatic environment, of which the fish will prefer. However, various anthropogenic activities by humans (including artisanal fisheries itself and some natural perturbations in the watershed, riparian zone, water body of the fish habitat and on the fish tend to take away these needs thereby compromising the fish welfare. These activities include environmental degradation, boat/canoe building, use of motorized engine boats/canoes, use of active and passive fishing gears, obnoxious cultural, religious and social fishing practices, fish harvesting, handling and processing among others. One way to understand the welfare needs of an individual fish is to understand its biology. Poor welfare conditions could then be assessed by how far the individual fish has deviated from the normal conditions. Non-intrusive signs based on the health, behavior, morphological anomalies, swimming, reduction in population and growth, outbreak of parasitic infections, injuries and loss of condition can be used to assess fish whose welfare has been compromised. Artisanal fishers should not only be concerned with catch, but, also the welfare of the fish being caught. This is because if the welfare of the fish is compromised, it is going to definitely affect the catch. As indispensable as fish is to humans, humans should not derive its pleasure at the expense of fish suffering. Human activities that impinge on the welfare of wild fish may not necessarily be stopped, but at least minimized in order to have continued sustainable artisanal exploitation of the fisheries.

  20. Kalispel Non-Native Fish Suppression Project 2007 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    Wingert, Michele; Andersen, Todd [Kalispel Natural Resource Department

    2008-11-18

    Non-native salmonids are impacting native salmonid populations throughout the Pend Oreille Subbasin. Competition, hybridization, and predation by non-native fish have been identified as primary factors in the decline of some native bull trout (Salvelinus confluentus) and westslope cutthroat trout (Oncorhynchus clarki lewisi) populations. In 2007, the Kalispel Natural Resource Department (KNRD) initiated the Kalispel Nonnative Fish Suppression Project. The goal of this project is to implement actions to suppress or eradicate non-native fish in areas where native populations are declining or have been extirpated. These projects have previously been identified as critical to recovering native bull trout and westslope cutthroat trout (WCT). Lower Graham Creek was invaded by non-native rainbow (Oncorhynchus mykiss) and brook trout (Salvelinus fontinalis) after a small dam failed in 1991. By 2003, no genetically pure WCT remained in the lower 700 m of Graham Creek. Further invasion upstream is currently precluded by a relatively short section of steep, cascade-pool stepped channel section that will likely be breached in the near future. In 2008, a fish management structure (barrier) was constructed at the mouth of Graham Creek to preclude further invasion of non-native fish into Graham Creek. The construction of the barrier was preceded by intensive electrofishing in the lower 700 m to remove and relocate all captured fish. Westslope cutthroat trout have recently been extirpated in Cee Cee Ah Creek due to displacement by brook trout. We propose treating Cee Cee Ah Creek with a piscicide to eradicate brook trout. Once eradication is complete, cutthroat trout will be translocated from nearby watersheds. In 2004, the Washington Department of Fish and Wildlife (WDFW) proposed an antimycin treatment within the subbasin; the project encountered significant public opposition and was eventually abandoned. However, over the course of planning this 2004 project, little public

  1. Gestational age dependent changes of the fetal brain, liver and adipose tissue fatty acid compositions in a population with high fish intakes

    NARCIS (Netherlands)

    Kuipers, Remko S.; Luxwolda, Martine F.; Offringa, Pieter J.; Boersma, E. Rudy; Dijck-Brouwer, D. A. Janneke; Muskiet, Frits A. J.

    2012-01-01

    Introduction: There are no data on the intrauterine fatty acid (FA) compositions of brain, liver and adipose tissue of infants born to women with high fish intakes. Subjects and methods: We analyzed the brain (n = 18), liver (n = 14) and adipose tissue (n = 11) FA compositions of 20 stillborn

  2. Population connectivity and the effectiveness of marine protected areas to protect vulnerable, exploited and endemic coral reef fishes at an endemic hotspot

    KAUST Repository

    Van Der Meer, Martin H.; Berumen, Michael L.; Hobbs, Jean Paul Adrian; Van Herwerden, Lynne Van

    2014-01-01

    -replenishment, and the absence of MPAs at NI needs to be rectified to ensure the persistence of endemic species at this location. Other endemic fishes exhibit similar patterns of high self-replenishment across the four locations, indicating that a single spatial management

  3. Effects of streamflow diversion on a fish population: combining empirical data and individual-based models in a site-specific evaluation

    Science.gov (United States)

    Bret C. Harvey; Jason L. White; Rodney J. Nakamoto; Steven F. Railsback

    2014-01-01

    Resource managers commonly face the need to evaluate the ecological consequences of specific water diversions of small streams. We addressed this need by conducting 4 years of biophysical monitoring of stream reaches above and below a diversion and applying two individual-based models of salmonid fish that simulated different levels of behavioral complexity. The...

  4. Immunity to fish rhabdoviruses

    Science.gov (United States)

    Purcell, Maureen K.; Laing, Kerry J.; Winton, James R.

    2012-01-01

    Members of the family Rhabdoviridae are single-stranded RNA viruses and globally important pathogens of wild and cultured fish and thus relatively well studied in their respective hosts or other model systems. Here, we review the protective immune mechanisms that fish mount in response to rhabdovirus infections. Teleost fish possess the principal components of innate and adaptive immunity found in other vertebrates. Neutralizing antibodies are critical for long-term protection from fish rhabdoviruses, but several studies also indicate a role for cell-mediated immunity. Survival of acute rhabdoviral infection is also dependent on innate immunity, particularly the interferon (IFN) system that is rapidly induced in response to infection. Paradoxically, rhabdoviruses are sensitive to the effects of IFN but virulent rhabdoviruses can continue to replicate owing to the abilities of the matrix (M) protein to mediate host-cell shutoff and the non-virion (NV) protein to subvert programmed cell death and suppress functional IFN. While many basic features of the fish immune response to rhabdovirus infections are becoming better understood, much less is known about how factors in the environment affect the ecology of rhabdovirus infections in natural populations of aquatic animals.

  5. Immunity to fish rhabdoviruses.

    Science.gov (United States)

    Purcell, Maureen K; Laing, Kerry J; Winton, James R

    2012-01-01

    Members of the family Rhabdoviridae are single-stranded RNA viruses and globally important pathogens of wild and cultured fish and thus relatively well studied in their respective hosts or other model systems. Here, we review the protective immune mechanisms that fish mount in response to rhabdovirus infections. Teleost fish possess the principal components of innate and adaptive immunity found in other vertebrates. Neutralizing antibodies are critical for long-term protection from fish rhabdoviruses, but several studies also indicate a role for cell-mediated immunity. Survival of acute rhabdoviral infection is also dependent on innate immunity, particularly the interferon (IFN) system that is rapidly induced in response to infection. Paradoxically, rhabdoviruses are sensitive to the effects of IFN but virulent rhabdoviruses can continue to replicate owing to the abilities of the matrix (M) protein to mediate host-cell shutoff and the non‑virion (NV) protein to subvert programmed cell death and suppress functional IFN. While many basic features of the fish immune response to rhabdovirus infections are becoming better understood, much less is known about how factors in the environment affect the ecology of rhabdovirus infections in natural populations of aquatic animals.

  6. Immunity to Fish Rhabdoviruses

    Directory of Open Access Journals (Sweden)

    Maureen K. Purcell

    2012-01-01

    Full Text Available Members of the family Rhabdoviridae are single-stranded RNA viruses and globally important pathogens of wild and cultured fish and thus relatively well studied in their respective hosts or other model systems. Here, we review the protective immune mechanisms that fish mount in response to rhabdovirus infections. Teleost fish possess the principal components of innate and adaptive immunity found in other vertebrates. Neutralizing antibodies are critical for long-term protection from fish rhabdoviruses, but several studies also indicate a role for cell-mediated immunity. Survival of acute rhabdoviral infection is also dependent on innate immunity, particularly the interferon (IFN system that is rapidly induced in response to infection. Paradoxically, rhabdoviruses are sensitive to the effects of IFN but virulent rhabdoviruses can continue to replicate owing to the abilities of the matrix (M protein to mediate host-cell shutoff and the non‑virion (NV protein to subvert programmed cell death and suppress functional IFN. While many basic features of the fish immune response to rhabdovirus infections are becoming better understood, much less is known about how factors in the environment affect the ecology of rhabdovirus infections in natural populations of aquatic animals.

  7. Population genetic structure revealed by a school of the freshwatermigratory fish, Brycon hilarii Estructura genética poblacional revelada por un cardumen del pez migratorio de agua dulce, Brycon hilarii

    Directory of Open Access Journals (Sweden)

    Alexandra Sanches

    2012-07-01

    Full Text Available It is believed that different genetic populations of migratory fishes can co-exist in a single hydrographic system. Although different populations may occupy and explore the river together, they segregate during the spawning season and consequently the population genetic structuring is maintained. Genetic variation of a Brycon hilarii spawning school and samples from different collection sites in the Miranda River basin were surveyed using seven microsatellites. Population structuring was revealed by a significant differentiation of the spawning school related to the supposed local populations. The genetic differentiation detected may be supported by behavior during the reproductive season that promotes the maintenance of the genetic integrity of different populations. These data may contribute toward the understanding of the behavior and biology of these fish as well as fishery management and species conservation programs.Se ha documentado que diferentes poblaciones genéticas de peces migratorios pueden coexistir en un único sistema hidrográfico. Diferentes poblaciones pueden ocupar y explorar el río juntas, pero se segregan durante la temporada de desove y consecuentemente la estructuración genética poblacional se mantiene. La diversidad genética de un cardumen reproductivo de Brycon hilarii y muestras de diferentes sitios en la cuenca del Río Miranda fueron analizadas mediante siete microsatélites. La estructura poblacional fue revelada por una diferenciación genética significativa del cardumen reproductivo con las muestras de las poblaciones locales. La diferenciación genética detectada puede ser resultado de un probable comportamiento durante la temporada reproductiva, que promueve el mantenimiento de la integridad genética de las diferentes poblaciones. Estos datos pueden contribuir a la comprensión del comportamiento y biología de estos peces, así como amparar programas de gestión de la pesca y conservación de las

  8. Integrated Quality Assurance of Chilled Food Fish at Sea

    DEFF Research Database (Denmark)

    Frederiksen, Marco Thorup; Olsen, Karsten Bæk; Popescu, Valeriu

    1997-01-01

    The aim of the IQAS project is to improve the quality of fresh fish (white fish and flat fish) landed by the Community vessels significantly and to increase the proportion of the fish caught used for food purposes, as well as to improve the on-board working conditions. This will be achieved by sp......, container labelling and data storage system has been developed to specify the quality of the fish to the buyer at the point of sale by reference to the actual time/temperature history of the fish prior to the sale and to the measurements of length and weight......The aim of the IQAS project is to improve the quality of fresh fish (white fish and flat fish) landed by the Community vessels significantly and to increase the proportion of the fish caught used for food purposes, as well as to improve the on-board working conditions. This will be achieved...

  9. Kalispel Resident Fish Project : Annual Report, 2002.

    Energy Technology Data Exchange (ETDEWEB)

    Andersen, Todd; Olson, Jason

    2003-03-01

    In 2002 the Kalispel Natural Resource Department (KNRD) continued monitoring enhancement projects (implemented from 1996 to 1998) for bull trout (Salvelinus confluentus), westslope cutthroat (Oncorhynchus clarki lewisi) and largemouth bass (Micropterus salmoides). Additional baseline fish population and habitat assessments were conducted, in 2002, in tributaries to the Pend Oreille River. Further habitat and fish population enhancement projects were also implemented in 2002.

  10. Alabama ESI: FISH (Fish Polygons)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — This data set contains sensitive biological resource data for marine, estuarine, and freshwater fish species in Alabama. Vector polygons in this data set represent...

  11. Maryland ESI: FISH (Fish Polygons)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — This data set contains sensitive biological resource data for marine, estuarine, anadromous, and freshwater fish species in Maryland. Vector polygons in this data...

  12. Hawaii ESI: FISH (Fish Polygons)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — This data set contains sensitive biological resource data for reef, marine, estuarine, and native stream fish species in coastal Hawaii. Vector polygons in this data...

  13. Virginia ESI: FISH (Fish Polygons)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — This data set contains sensitive biological resource data for marine, estuarine, anadromous, and brackishwater fish species in Virginia. Vector polygons in this data...

  14. Louisiana ESI: FISH (Fish Polygons)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — This data set contains sensitive biological resource data for freshwater (inland) fish species in coastal Louisiana. Vector polygons represent water-bodies and other...

  15. Bayesian Prior Probability Distributions for Internal Dosimetry

    Energy Technology Data Exchange (ETDEWEB)

    Miller, G.; Inkret, W.C.; Little, T.T.; Martz, H.F.; Schillaci, M.E

    2001-07-01

    The problem of choosing a prior distribution for the Bayesian interpretation of measurements (specifically internal dosimetry measurements) is considered using a theoretical analysis and by examining historical tritium and plutonium urine bioassay data from Los Alamos. Two models for the prior probability distribution are proposed: (1) the log-normal distribution, when there is some additional information to determine the scale of the true result, and (2) the 'alpha' distribution (a simplified variant of the gamma distribution) when there is not. These models have been incorporated into version 3 of the Bayesian internal dosimetric code in use at Los Alamos (downloadable from our web site). Plutonium internal dosimetry at Los Alamos is now being done using prior probability distribution parameters determined self-consistently from population averages of Los Alamos data. (author)

  16. Tendency in fishing development and fish consumption in Serbia

    Directory of Open Access Journals (Sweden)

    Tešić Milan

    2013-01-01

    Full Text Available Production and catch of fish in Serbia increases from year to year, while in the world it reached its peak at the beginning of this century. Serbia has all the favorable natural and economic conditions for further development of fishing. Out of total production, that is, annual fish catch in Serbia, the greatest part is sold by organized purchase, lower part is exported, and the reminder goes to the market through retail. It is well known that food consumption, therefore fish consumption, depends on several factors such as the production level, retail price, consumers purchasing power and their eating habits. Therefore, when analyzing the tendency of production and consumption of fish in Serbia, it is important to investigate the influence of production, price and purchasing power of consumers on it. In order to investigate the set objective, there were used corresponding quantitative data obtained by Statistical Office of the Republic of Serbia. On the basis of the original data, there were determined certain parameters, which were used as variables for calculation of correlational-regressive and maginal analysis for determining the elasticity of demand and consummation of fish per capita in Serbia. Production and catch of fish in Serbia tended to increase during the observed period, with annual growth rate of 17.4%. Beside the fact that annual growth rate is 4.8%, fish consumption per capita in Serbia is still quite small (X=4.89kg, what is a consequence of population habit to consume predominantly meat. In our study we have found out that fish consumption in Serbia mostly depend on fish production per capita (rxy=0.6364, as well as on groos (rxy=0.6045 and net (rxy=0.5969 earnings. Also, it is determined that consumption elasticity has the highest growth in regard to fish production per capita. [Projekat Ministarstva nauke Republike Srbije, br. TR 31011

  17. Accommodating Uncertainty in Prior Distributions

    Energy Technology Data Exchange (ETDEWEB)

    Picard, Richard Roy [Los Alamos National Lab. (LANL), Los Alamos, NM (United States); Vander Wiel, Scott Alan [Los Alamos National Lab. (LANL), Los Alamos, NM (United States)

    2017-01-19

    A fundamental premise of Bayesian methodology is that a priori information is accurately summarized by a single, precisely de ned prior distribution. In many cases, especially involving informative priors, this premise is false, and the (mis)application of Bayes methods produces posterior quantities whose apparent precisions are highly misleading. We examine the implications of uncertainty in prior distributions, and present graphical methods for dealing with them.

  18. 62 years of population dynamics of European perch (Perca fluviatilis) in a mesotrophic lake tracked using angler diaries: The role of commercial fishing, predation and temperature

    DEFF Research Database (Denmark)

    Skov, Christian; Jansen, Teunis; Arlinghaus, Robert

    2017-01-01

    (abundance, mean size and record size) of European perch (Perca fluviatilis L.) in relation to the impact of three commercial fishers with different fishing strategies, pike (Esox lucius L.) predation and temperature. We found that anglers’ harvest rates of perch varied by a factor of 10 over time......, but it also underlines the need for supplementary data on biotic and abiotic factors to reach the full potential of angler diary data...

  19. Fishing Access Areas

    Data.gov (United States)

    Vermont Center for Geographic Information — The Vermont Fish & Wildlife Department maintains developed fishing access areas. These sites provide public access to waters in Vermont for shore fishing...

  20. Statistical modelling of fish stocks

    DEFF Research Database (Denmark)

    Kvist, Trine

    1999-01-01

    for modelling the dynamics of a fish population is suggested. A new approach is introduced to analyse the sources of variation in age composition data, which is one of the most important sources of information in the cohort based models for estimation of stock abundancies and mortalities. The approach combines...... and it is argued that an approach utilising stochastic differential equations might be advantagous in fish stoch assessments....

  1. Bottom trawl assessment of Lake Ontario prey fishes

    Science.gov (United States)

    Weidel, Brian C.; Connerton, Michael J.; Holden, Jeremy

    2018-01-01

    Managing Lake Ontario fisheries in an ecosystem-context requires prey fish community and population data. Since 1978, multiple annual bottom trawl surveys have quantified prey fish dynamics to inform management relative to published Fish Community Objectives. In 2017, two whole-lake surveys collected 341 bottom trawls (spring: 204, fall: 137), at depths from 8-225m, and captured 751,350 fish from 29 species. Alewife were 90% of the total fish catch while Deepwater Sculpin, Round Goby, and Rainbow Smelt comprised the majority of the remaining total catch (3.8, 3.1, and 1.1% respectively). The adult Alewife abundance index for US waters increased in 2017 relative to 2016, however the index for Canadian waters declined. Adult Alewife condition, assessed by the predicted weight of a 165 mm fish (6.5 inches), declined in 2017 from record high values observed in spring 2016. Spring 2017 Alewife condition was slightly less than the 10-year average, but the fall value was well below the 10-year average, likely due to increased Age-1 Alewife abundance. The Age-1 Alewife abundance index was the highest observed in 40 years, and 8-times higher than the previous year. The Age-1 index estimates Alewife reproductive success the preceding year. The warm summer and winter of 2016 likely contributed to the large year class. In contrast the relatively cool 2017 spring and cold winter may result in a lower than average 2017 year class. Abundance indices for Rainbow Smelt, Cisco, and Emerald Shiner either declined or remained at low levels in 2017. Pelagic prey fish diversity continues to be low since a single species, Alewife, dominates the catch. Deepwater Sculpin were the most abundant benthic prey fish in 2017 because Round Goby abundance declined sharply from 2016. Slimy Sculpin density continued to decline and the 2017 biomass index for US waters was the lowest ever observed. Prior to Round Goby proliferation, juvenile Slimy Sculpin comprised ~10% of the Slimy Sculpin catch, but

  2. The Prior Internet Resources 2017

    DEFF Research Database (Denmark)

    Engerer, Volkmar Paul; Albretsen, Jørgen

    2017-01-01

    The Prior Internet Resources (PIR) are presented. Prior’s unpublished scientific manuscripts and his wast letter correspondence with fellow researchers at the time, his Nachlass, is now subject to transcription by Prior-researchers worldwide, and form an integral part of PIR. It is demonstrated...

  3. The Importance of Prior Knowledge.

    Science.gov (United States)

    Cleary, Linda Miller

    1989-01-01

    Recounts a college English teacher's experience of reading and rereading Noam Chomsky, building up a greater store of prior knowledge. Argues that Frank Smith provides a theory for the importance of prior knowledge and Chomsky's work provided a personal example with which to interpret and integrate that theory. (RS)

  4. Colville Tribal Fish Hatchery, annual report 2001

    International Nuclear Information System (INIS)

    2001-01-01

    Federal hydropower projects as well as private power utility systems have had a devastating impact upon anadromous fish resources that once flourished in the Columbia River and it's tributaries. Several areas were completely blocked to anadromous fish by dams, causing the native people who's number one food resource was salmon to rely entirely upon resident fish to replace lost fisheries resources. The Colville Tribal Fish Hatchery is an artificial production program to partially mitigate for anadromous fish losses in the ''Blocked Area'' above Chief Joseph and Grand Coulee Dams pursuant to Resident Fish Substitution Policy of the Northwest Power Planning Councils Fish and Wildlife Program. The hatchery was accepted into the Council's Fish and Wildlife Program in 1984 as a resident fish substitution measure and the hatchery was completed in 1990. The minimum production quota for this facility is 22,679 kg (50,000 lbs.) of trout. To achieve this quota the Colville Tribal Hatchery was scheduled to produce 174,000 fingerling rainbow trout (5 grams/fish), 330,000 sub-yearling rainbow trout (15 grams/fish), 80,000 legal size rainbow trout (90 grams/fish), 196,000 fingerling brook trout (5 grams/fish), 330,000 subyearling brook trout (15 grams/fish) and 60,000 lahontan cutthroat trout (15 grams/fish) in 2001. All fish produced are released into reservation waters, including boundary waters in an effort to provide a successful subsistence /recreational fishery for Colville Tribal members as well as a successful non-member sport fishery. The majority of the fish distributed from the facility are intended to provide a ''carry-over'' fishery. Fish produced at the facility are intended to be capable of contributing to the natural production component of the reservation fish populations. Contribution to the natural production component will be achieved by producing and releasing fish of sufficient quality and quantity for fish to survive to spawning maturity, to spawn

  5. Using 137Cs as a tool for the assessment and the management of erosion/sedimentation risks in view of the restoration of the Rainbow Smelt (Osmerus mordax) fish population in the Boyer River basin (Quebec, Canada)

    International Nuclear Information System (INIS)

    Bernard, C.; Laverdiere, M.R.

    2000-01-01

    The Boyer River (Quebec, Canada) drains a 217 km 2 watershed that is under cultivation at 60%. The last 2 km of the river bed has always been used as a spawning ground by Rainbow Smelts (Osmerus mordax). This fish population, which plays an important ecological role in the St. Lawrence River estuary, has dramatically declined over the last decades. Siltation and excessive algal growth in the spawning area were identified as the most probable causes of the fish population decline; suggesting that soil erosion, nutrient and sediment transport are major factors underlying the environmental problem. In this context, 137 Cs provides an effective tool for investigating the magnitude and spatial distribution of long-term soil redistribution taking place in the watershed. Sampling of cultivated fields, riverbanks, bottom sediments and forested sites were thus undertaken to help understand the erosive behaviour of the watershed. Results obtained so far suggest in-field erosion rates of up to 13 t ha -1 yr -1 with net outputs reaching 11 t ha -1 yr -1 . These results agree well with estimates obtained from the USLE. The 137 Cs data indicate that fields located in the upstream half of the basin produce smaller sediment loadings than those in the downstream portion, despite higher soil erodibilities and more frequent use for annual crops. They also suggest that more than 75% of the sediment deposited in the spawning area originates from cultivated fields, and less than 25% from streambanks. (author)

  6. Do bacteria, not fish, produce 'fish kairomone'?

    NARCIS (Netherlands)

    Ringelberg, J.; Van Gool, E.

    1998-01-01

    Fish-associated chemicals enhance phototactic downward swimming in Daphnia. If perch were treated with the antibiotic ampicillin, this enhancement was significantly decreased. Therefore, not fish, but bacteria associated with fish, seem to produce this kairomone. [KEYWORDS: Diel vertical migration;

  7. Drought-associated absence of alien invasive anchorworm, Lernaea cyprinacea (Copepoda: Lernaeidae, is related to changes in fish health

    Directory of Open Access Journals (Sweden)

    Rachel L. Welicky

    2017-12-01

    Full Text Available Recently, Mozambique tilapia (Oreochromis mossambicus Peters, 1852 were listed on the IUCN Red List as near-threatened as their populations are at risk due to hybridization. Another factor that potentially contributes to their population decline is that they are regularly infected by the invasive parasitic copepod anchorworm, Lernaea cyprinacea Linnaeus, 1758. Considering anchorworm-infected Mozambique tilapia are common, understanding their condition with respect to infection is difficult as uninfected fish from the same localities have been unavailable for comparison. A severe drought in southern Africa has created hypersaline environments in the Phongolo River floodplain of north-eastern South Africa, such that freshwater parasites cannot survive and uninfected fish are now found. To determine how infection influences host health, infected and uninfected Mozambique tilapia were collected before and during drought conditions, from Nyamiti pan of the Phongolo River floodplain. Anchorworm-infected fish prevalence was recorded, and anchorworms were collected from hosts and identified to the species level using molecular data of the 18S rRNA gene. For each fish, intensity of anchorworm infection, total length, and weights of the gutted body, liver, spleen, and gonads were recorded. Gutted condition factor, hepato-, spleeno-, and gonado-somatic index values per fish, and prevalence of infection per collection were determined. A rapid health assessment was also conducted to determine a health score for each fish. Molecular analyses confirmed the anchorworm studied was L. cyprinacea. Prior to and during drought, prevalence of infection was 100%, and 0%, respectively. Before drought, fish had significantly reduced hepato-, spleeno-, and gonado-somatic index values, and higher health assessment scores, yet significantly higher gutted condition. Anchorworm intensity was indirectly correlated with fish liver and gonad condition. This study demonstrates

  8. Fish irradiation

    International Nuclear Information System (INIS)

    Kovacs, J.; Tengumnuay, C.; Juangbhanich, C.

    1970-01-01

    Chub-mackerel was chosen for the study because they are the most common fish in Thailand. Preliminary investigations were conducted to determine the maximum radiation dose of gamma-rays by organoleptic tests. The samples were subjected to radiation at various doses up to 4 Mrad. Many experiments were conducted using other kinds of fish. The results showed that 1 Mrad would be the maximum acceptable dose for fish. Later, the influence of the radiation dose from 0.1-1 Mrad was studied in order to find the optimum acceptable dose for preservation of fish without off-flavour. For this purpose, the Hedonic scale was used. It was found that 0.2 and 0.5 Mrad gave the best result on Chub mackerel. The determinations of optimum dose, organoleptic, microbiological and trimethylamine content changes were done. The results showed that Chub mackerel irradiated at 0.2, 0.5 and 1 Mrad stored at 3 0 C for 71 days were still acceptable, on the contrary the untreated samples were found unacceptable at 14 days. The trimethylamine increment was significantly higher in the untreated samples. At 15 days storage, trimethylamine in the non-irradiated Chub-mackerel was about 10 times higher than the irradiated ones. At 51 and 79 days storage, about 13 times higher in the control samples than the irradiated samples except 0.1 Mrad. Only 2 times higher was found for the 0.1 Mrad. The microbiological results showed that the irradiation above 0.2 Mrad gave favorable extension of shelf-life of fish

  9. Broad-scale sampling of primary freshwater fish populations reveals the role of intrinsic traits, inter-basin connectivity, drainage area and latitude on shaping contemporary patterns of genetic diversity

    Directory of Open Access Journals (Sweden)

    Carla Sousa-Santos

    2016-02-01

    Full Text Available Background. Worldwide predictions suggest that up to 75% of the freshwater fish species occurring in rivers with reduced discharge could be extinct by 2070 due to the combined effect of climate change and water abstraction. The Mediterranean region is considered to be a hotspot of freshwater fish diversity but also one of the regions where the effects of climate change will be more severe. Iberian cyprinids are currently highly endangered, with over 68% of the species raising some level of conservation concern. Methods. During the FISHATLAS project, the Portuguese hydrographical network was extensively covered (all the 34 river basins and 47 sub-basins in order to contribute with valuable data on the genetic diversity distribution patterns of native cyprinid species. A total of 188 populations belonging to 16 cyprinid species of Squalius, Luciobarbus, Achondrostoma, Iberochondrostoma, Anaecypris and Pseudochondrostoma were characterized, for a total of 3,678 cytochrome b gene sequences. Results. When the genetic diversity of these populations was mapped, it highlighted differences among populations from the same species and between species with identical distribution areas. Factors shaping the contemporary patterns of genetic diversity were explored and the results revealed the role of latitude, inter-basin connectivity, migratory behaviour, species maximum size, species range and other species intrinsic traits in determining the genetic diversity of sampled populations. Contrastingly, drainage area and hydrological regime (permanent vs. temporary seem to have no significant effect on genetic diversity. Species intrinsic traits, maximum size attained, inter-basin connectivity and latitude explained over 30% of the haplotype diversity variance and, generally, the levels of diversity were significantly higher for smaller sized species, from connected and southerly river basins. Discussion. Targeting multiple co-distributed species of primary

  10. Influence of the water quality improvement on fish population in the Seine River (Paris, France) over the 1990-2013 period.

    Science.gov (United States)

    Azimi, Sam; Rocher, Vincent

    2016-01-15

    Over the past 20 years, rules concerning wastewater treatment and quality of water discharged into the environment have changed considerably. Huge investments have been made in Paris conurbation to improve waste water treatment processes in accordance with the European Water Framework Directive. The interdepartmental association for sewage disposal in Paris conurbation (SIAAP) carried out a monitoring of both fish assemblages and water quality in the Seine River around the Paris conurbation (France) since the early 90's. The main goal of this study was to estimate the influence of the water quality improvement on fish. On one hand, the study confirmed the improvement of the water quality (dissolved oxygen, ammonia nitrogen, organic matter) in the Seine River, mostly focused downstream of Paris conurbation. On the other hand, an increase of the number of species occurred from 1990 (14) to 2013 (21). Moreover, changes in the river Seine assemblages happened over that 23-year period with emergence of sensitive species (ruffe, scalpin and pike-perch). The improvement of the water quality was also reported with respect to the Index of Biotic Integrity (IBI). However, no variation of pollutant concentrations in roach, eel and chub muscles has been observed. An exceedance of the environmental quality standards have even been reported all over this period as regards mercury and organochlorine.

  11. Cooperative Game for Fish Harvesting and Pollution Control

    KAUST Repository

    Dia, Ben Mansour

    2015-01-07

    We study fishery strategies in a shallow river subject to agricultural and industrial pollution. The flowing pollutants in the river are modeled by a nonlinear stochastic differential equation in a general manner. The logistic growth model for the fish population is modified to cover the pollution impact on the fish growth rate. A stochastic cooperative game is formulated to design strategies for preserving the fish population by controlling the pollution as well as the harvesting fish.

  12. Microbiological spoilage of fish and fish products

    DEFF Research Database (Denmark)

    Gram, Lone; Huss, Hans Henrik

    1996-01-01

    Spoilage of fresh and lightly preserved fish products is caused by microbial action. This paper reviews the current knowledge in terms of the microbiology of fish and fish products with particular emphasis on identification of specific spoilage bacteria and the qualitative and quantitative...... biochemical indicators of spoilage. Shewanzella putrefaciens and Pseudomonas spp. are the specific spoilage bacteria of iced fresh fish regardless of the origin of the fish. Modified atmosphere stored marine fish from temperate waters are spoiled by the CO2 resistant Photobacterium phosphoreum whereas Gram......- positive bacteria are likely spoilers of CO2 packed fish from fresh or tropical waters. Fish products with high salt contents may spoil due to growth of halophilic bacteria (salted fish) or growth of anaerobic bacteria and yeasts (barrel salted fish). Whilst the spoilage of fresh and highly salted fish...

  13. Recruiting for Prior Service Market

    Science.gov (United States)

    2008-06-01

    perceptions, expectations and issues for re-enlistment • Develop potential marketing and advertising tactics and strategies targeted to the defined...01 JUN 2008 2. REPORT TYPE N/A 3. DATES COVERED - 4. TITLE AND SUBTITLE Recruiting for Prior Service Market 5a. CONTRACT NUMBER 5b. GRANT...Command First Handshake to First Unit of Assignment An Army of One Proud to Be e e to Serve Recruiting for Prior Service Market MAJ Eric Givens / MAJ Brian

  14. Can natural selection encode Bayesian priors?

    Science.gov (United States)

    Ramírez, Juan Camilo; Marshall, James A R

    2017-08-07

    The evolutionary success of many organisms depends on their ability to make decisions based on estimates of the state of their environment (e.g., predation risk) from uncertain information. These decision problems have optimal solutions and individuals in nature are expected to evolve the behavioural mechanisms to make decisions as if using the optimal solutions. Bayesian inference is the optimal method to produce estimates from uncertain data, thus natural selection is expected to favour individuals with the behavioural mechanisms to make decisions as if they were computing Bayesian estimates in typically-experienced environments, although this does not necessarily imply that favoured decision-makers do perform Bayesian computations exactly. Each individual should evolve to behave as if updating a prior estimate of the unknown environment variable to a posterior estimate as it collects evidence. The prior estimate represents the decision-maker's default belief regarding the environment variable, i.e., the individual's default 'worldview' of the environment. This default belief has been hypothesised to be shaped by natural selection and represent the environment experienced by the individual's ancestors. We present an evolutionary model to explore how accurately Bayesian prior estimates can be encoded genetically and shaped by natural selection when decision-makers learn from uncertain information. The model simulates the evolution of a population of individuals that are required to estimate the probability of an event. Every individual has a prior estimate of this probability and collects noisy cues from the environment in order to update its prior belief to a Bayesian posterior estimate with the evidence gained. The prior is inherited and passed on to offspring. Fitness increases with the accuracy of the posterior estimates produced. Simulations show that prior estimates become accurate over evolutionary time. In addition to these 'Bayesian' individuals, we also

  15. Training shortest-path tractography: Automatic learning of spatial priors

    DEFF Research Database (Denmark)

    Kasenburg, Niklas; Liptrot, Matthew George; Reislev, Nina Linde

    2016-01-01

    Tractography is the standard tool for automatic delineation of white matter tracts from diffusion weighted images. However, the output of tractography often requires post-processing to remove false positives and ensure a robust delineation of the studied tract, and this demands expert prior...... knowledge. Here we demonstrate how such prior knowledge, or indeed any prior spatial information, can be automatically incorporated into a shortest-path tractography approach to produce more robust results. We describe how such a prior can be automatically generated (learned) from a population, and we...

  16. Fish gelatin.

    Science.gov (United States)

    Boran, Gokhan; Regenstein, Joe M

    2010-01-01

    Gelatin is a multifunctional ingredient used in foods, pharmaceuticals, cosmetics, and photographic films as a gelling agent, stabilizer, thickener, emulsifier, and film former. As a thermoreversible hydrocolloid with a narrower gap between its melting and gelling temperatures, both of which are below human body temperature, gelatin provides unique advantages over carbohydrate-based gelling agents. Gelatin is mostly produced from pig skin, and cattle hides and bones. Some alternative raw materials have recently gained attention from both researchers and the industry not just because they overcome religious concerns shared by Jews and Muslims but also because they provide, in some cases, technological advantages over mammalian gelatins. Fish skins from a number of fish species are among the other sources that have been comprehensively studied as sources for gelatin production. Fish skins have a significant potential for the production of high-quality gelatin with different melting and gelling temperatures over a much wider range than mammalian gelatins, yet still have a sufficiently high gel strength and viscosity. Gelatin quality is industrially determined by gel strength, viscosity, melting or gelling temperatures, the water content, and microbiological safety. For gelatin manufacturers, yield from a particular raw material is also important. Recent experimental studies have shown that these quality parameters vary greatly depending on the biochemical characteristics of the raw materials, the manufacturing processes applied, and the experimental settings used for quality control tests. In this review, the gelatin quality achieved from different fish species is reviewed along with the experimental procedures used to determine gelatin quality. In addition, the chemical structure of collagen and gelatin, the collagen-gelatin conversion, the gelation process, and the gelatin market are discussed. Copyright © 2010 Elsevier Inc. All rights reserved.

  17. Fish Immunoglobulins

    OpenAIRE

    Sara Mashoof; Michael F. Criscitiello

    2016-01-01

    The B cell receptor and secreted antibody are at the nexus of humoral adaptive immunity. In this review, we summarize what is known of the immunoglobulin genes of jawed cartilaginous and bony fishes. We focus on what has been learned from genomic or cDNA sequence data, but where appropriate draw upon protein, immunization, affinity and structural studies. Work from major aquatic model organisms and less studied comparative species are both included to define what is the rule for an immunoglob...

  18. Fish cognition

    OpenAIRE

    Bshary, Redouan; Brown, Culum

    2017-01-01

    The central nervous system, and the brain in particular, is one of the most remarkable products of evolution. This system allows an individual to acquire, process, store and act on information gathered from the environment. The resulting flexibility in behavior beyond genetically coded strategies is a prime adaptation in animals. The field of animal cognition examines the underlying processes and mechanisms. Fishes are a particularly interesting group of vertebrates to study cognition for two...

  19. Fish hemoglobins

    OpenAIRE

    Souza,P.C. de; Bonilla-Rodriguez,G.O.

    2007-01-01

    Vertebrate hemoglobin, contained in erythrocytes, is a globular protein with a quaternary structure composed of 4 globin chains (2 alpha and 2 beta) and a prosthetic group named heme bound to each one. Having myoglobin as an ancestor, hemoglobin acquired the capacity to respond to chemical stimuli that modulate its function according to tissue requirements for oxygen. Fish are generally submitted to spatial and temporal O2 variations and have developed anatomical, physiological and biochemica...

  20. Population dynamics of the migratory fish Prochilodus lineatus in a neotropical river: the relationships with river discharge, flood pulse, El Niño and fluvial megafan behaviour

    Directory of Open Access Journals (Sweden)

    Marinke J. M. Stassen

    Full Text Available The relative importance of flood pulse dynamics and megafan behaviour for the Sábalo (Prochilodus lineatus catches in the neotropical Pilcomayo River is studied. The Sábalo catches can mainly be explained by decreased river discharges in the preceding years resulting in smaller inundated areas during rainy season floods and thereby in a decreased area of feeding grounds for the fishes. The decreased river discharges and the related decline of Sábalo catches in the 1990's can be linked to the 90-95 El Niño event. In 2007 the Sábalo catches were comparable to the catches before the "El Niño" event. The connectivity (continuity between the main river and flood plain areas, which is influenced by sedimentation processes, is also of great importance and very probably plays a more important role since the late 1990's.

  1. Fish hemoglobins

    Directory of Open Access Journals (Sweden)

    P.C. de Souza

    2007-06-01

    Full Text Available Vertebrate hemoglobin, contained in erythrocytes, is a globular protein with a quaternary structure composed of 4 globin chains (2 alpha and 2 beta and a prosthetic group named heme bound to each one. Having myoglobin as an ancestor, hemoglobin acquired the capacity to respond to chemical stimuli that modulate its function according to tissue requirements for oxygen. Fish are generally submitted to spatial and temporal O2 variations and have developed anatomical, physiological and biochemical strategies to adapt to the changing environmental gas availability. Structurally, most fish hemoglobins are tetrameric; however, those from some species such as lamprey and hagfish dissociate, being monomeric when oxygenated and oligomeric when deoxygenated. Fish blood frequently possesses several hemoglobins; the primary origin of this finding lies in the polymorphism that occurs in the globin loci, an aspect that may occasionally confer advantages to its carriers or even be a harmless evolutionary remnant. On the other hand, the functional properties exhibit different behaviors, ranging from a total absence of responses to allosteric regulation to drastic ones, such as the Root effect.

  2. Dietary α-Linolenic Acid, Marine ω-3 Fatty Acids, and Mortality in a Population With High Fish Consumption: Findings From the PREvención con DIeta MEDiterránea (PREDIMED) Study.

    Science.gov (United States)

    Sala-Vila, Aleix; Guasch-Ferré, Marta; Hu, Frank B; Sánchez-Tainta, Ana; Bulló, Mònica; Serra-Mir, Mercè; López-Sabater, Carmen; Sorlí, Jose V; Arós, Fernando; Fiol, Miquel; Muñoz, Miguel A; Serra-Majem, Luis; Martínez, J Alfredo; Corella, Dolores; Fitó, Montserrat; Salas-Salvadó, Jordi; Martínez-González, Miguel A; Estruch, Ramón; Ros, Emilio; B

    2016-01-26

    Epidemiological evidence suggests a cardioprotective role of α-linolenic acid (ALA), a plant-derived ω-3 fatty acid. It is unclear whether ALA is beneficial in a background of high marine ω-3 fatty acids (long-chain n-3 polyunsaturated fatty acids) intake. In persons at high cardiovascular risk from Spain, a country in which fish consumption is customarily high, we investigated whether meeting the International Society for the Study of Fatty Acids and Lipids recommendation for dietary ALA (0.7% of total energy) at baseline was related to all-cause and cardiovascular disease mortality. We also examined the effect of meeting the society's recommendation for long-chain n-3 polyunsaturated fatty acids (≥500 mg/day). We longitudinally evaluated 7202 participants in the PREvención con DIeta MEDiterránea (PREDIMED) trial. Multivariable-adjusted Cox regression models were fitted to estimate hazard ratios. ALA intake correlated to walnut consumption (r=0.94). During a 5.9-y follow-up, 431 deaths occurred (104 cardiovascular disease, 55 coronary heart disease, 32 sudden cardiac death, 25 stroke). The hazard ratios for meeting ALA recommendation (n=1615, 22.4%) were 0.72 (95% CI 0.56-0.92) for all-cause mortality and 0.95 (95% CI 0.58-1.57) for fatal cardiovascular disease. The hazard ratios for meeting the recommendation for long-chain n-3 polyunsaturated fatty acids (n=5452, 75.7%) were 0.84 (95% CI 0.67-1.05) for all-cause mortality, 0.61 (95% CI 0.39-0.96) for fatal cardiovascular disease, 0.54 (95% CI 0.29-0.99) for fatal coronary heart disease, and 0.49 (95% CI 0.22-1.01) for sudden cardiac death. The highest reduction in all-cause mortality occurred in participants meeting both recommendations (hazard ratio 0.63 [95% CI 0.45-0.87]). In participants without prior cardiovascular disease and high fish consumption, dietary ALA, supplied mainly by walnuts and olive oil, relates inversely to all-cause mortality, whereas protection from cardiac mortality is limited to

  3. 36 CFR 2.3 - Fishing.

    Science.gov (United States)

    2010-07-01

    ... impact populations of native species adversely, and park management plans do not call for elimination of... time of catching the person did not possess the legal limit of fish. (8) Fishing from motor road bridges, from or within 200 feet of a public raft or float designated for water sports, or within the...

  4. A synthesis of ecological and fish-community changes in Lake Ontario, 1970-2000

    Science.gov (United States)

    Mills, E.L.; Casselman, J.M.; Dermott, R.; Fitzsimons, J.D.; Gal, G.; Holeck, K. T.; Hoyle, J.A.; Johannsson, O.E.; Lantry, B.F.; Makarewicz, J.C.; Millard, E.S.; Munawar, I.F.; Munawar, M.; O'Gorman, R.; Owens, R.W.; Rudstam, L. G.; Schaner, T.; Stewart, T.J.

    2005-01-01

    We assessed stressors associated with ecological and fishcommunity changes in Lake Ontario since 1970, when the first symposium on Salmonid Communities in Oligotrophic Lakes (SCOL I) was held (J. Fish. Res. Board Can. 29: 613-616). Phosphorus controls implemented in the early 1970s were undeniably successful; lower food-web studies showed declines in algal abundance and epilimnetic zooplankton production and a shift in pelagic primary productivity toward smaller organisms. Stressors on the fish community prior to 1970 such as exploitation, sea lamprey (Petromyzon marinus) predation, and effects of nuisance populations of alewife (Alosa pseudoharengus) were largely ameliorated by the 1990s. The alewife became a pivotal species supporting a multi-million-dollar salmonid sport fishery, but alewife-induced thiamine deficiency continued to hamper restoration and sustainability of native lake trout (Salvelinus namaycush). Expanding salmonine populations dependent on alewife raised concerns about predator demand and prey supply, leading to reductions in salmonine stocking in the early 1990s. Relaxation of the predation impact by alewives and their shift to deeper water allowed recovery of native fishes such as threespine stickleback (Gasterosteus aculeatus) and emerald shiner (Notropis atherinoides). The return of the Lake Ontario ecosystem to historical conditions has been impeded by unplanned introductions. Establishment of Dreissena spp. led to increased water clarity and increased vectoring of lower trophic-level production to benthic habitats and contributed to the collapse of Diporeia spp. populations, behavioral modifications of key fish species, and the decline of native lake whitefish (Coregonus clupeaformis). Despite reduced productivity, exotic-species introductions, and changes in the fish community, offshore Mysis relicta populations remained relatively stable. The effects of climate and climate change on the population abundance and dynamics of Lake Ontario

  5. scale fish- eries: a comparison of two fishing settlements in ...

    African Journals Online (AJOL)

    is widely recognised as having a major influence on marine ecosystems ... sanal and small - scale fisheries can be difficult due to geographi- ... ever - growing coastal populations, the number of small - scale ... northern Madagascar near the city of Antsiranana, ... increasingly becoming a tourist destination, and some fish-.

  6. Fish Tales

    International Nuclear Information System (INIS)

    McLerran, L.

    2010-01-01

    This talk is about fishing and the friendships that have resulted in its pursuit. It is also about theoretical physics, and the relationship of imagination and fantasy to the establishment of ideas about nature. Fishermen, like theoretical physicists, are well known for their inventive imaginations. Perhaps neither are as clever as sailors, who conceived of the mermaid. If one doubts the power of this fantasy, one should remember the ghosts of the many sailors who drowned pursuing these young nymphs. An extraordinary painting by J. Waterhouse is shown as Fig. 1. The enchantment of a mermaid must reflect an extraordinary excess of imagination on the part of the sailor, perhaps together with an impractical turn of mind. A consummated relationship with a mermaid is after all, by its very nature a fantasy incapable of realization. To a theoretical physicist, she is symbolic of many ideas we develop. There are many truths known to fisherman in which one might also find parallels to the goals of scientists: (1) A fish is the only animal that keeps growing after its death; (2) Nothing makes a fish bigger than almost being caught; (3) ''...of all the liars among mankind, the fisherman is the most trustworthy.'' (William Sherwood Fox, in Silken Lines and Silver Hooks); and (4) Men and fish are alike. They both get into trouble when they open their mouths. These quotes may be interpreted as reflecting skepticism regarding the honesty of fisherman, and probably do not reflect adequate admiration for a creative imagination. Is it fair to criticize a person for believing a falsehood that he or she sincerely believes to be true? The fisherman simultaneously invents the lie, and believes in it himself. The parallel with theoretical physics is perhaps only approximate, although we physicists may invent stories that we come to believe, on some rare occasions our ideas actually correspond to a more or less true descriptions of nature. These minor philosophical differences are not

  7. Fish Tales

    Energy Technology Data Exchange (ETDEWEB)

    McLerran, L.

    2010-07-06

    This talk is about fishing and the friendships that have resulted in its pursuit. It is also about theoretical physics, and the relationship of imagination and fantasy to the establishment of ideas about nature. Fishermen, like theoretical physicists, are well known for their inventive imaginations. Perhaps neither are as clever as sailors, who conceived of the mermaid. If one doubts the power of this fantasy, one should remember the ghosts of the many sailors who drowned pursuing these young nymphs. An extraordinary painting by J. Waterhouse is shown as Fig. 1. The enchantment of a mermaid must reflect an extraordinary excess of imagination on the part of the sailor, perhaps together with an impractical turn of mind. A consummated relationship with a mermaid is after all, by its very nature a fantasy incapable of realization. To a theoretical physicist, she is symbolic of many ideas we develop. There are many truths known to fisherman in which one might also find parallels to the goals of scientists: (1) A fish is the only animal that keeps growing after its death; (2) Nothing makes a fish bigger than almost being caught; (3) ''...of all the liars among mankind, the fisherman is the most trustworthy.'' (William Sherwood Fox, in Silken Lines and Silver Hooks); and (4) Men and fish are alike. They both get into trouble when they open their mouths. These quotes may be interpreted as reflecting skepticism regarding the honesty of fisherman, and probably do not reflect adequate admiration for a creative imagination. Is it fair to criticize a person for believing a falsehood that he or she sincerely believes to be true? The fisherman simultaneously invents the lie, and believes in it himself. The parallel with theoretical physics is perhaps only approximate, although we physicists may invent stories that we come to believe, on some rare occasions our ideas actually correspond to a more or less true descriptions of nature. These minor philosophical

  8. Distribution, population biology, and trophic ecology of the deepwater demersal fish Halosauropsis macrochir (Pisces: Halosauridae on the mid-Atlantic Ridge.

    Directory of Open Access Journals (Sweden)

    Odd Aksel Bergstad

    Full Text Available Halosauropsis macrochir ranked amongst the most abundant and widespread demersal fishes on the mid-Atlantic Ridge of the North Atlantic (Iceland-Azores with greatest abundance at 1700-3500 m. All sizes, ranging from 10-76 cm total length, occurred in the area without any apparent spatial pattern or depth trend. Using otolith sections displaying growth increments assumed to represent annuli, the age range recorded was 2-36 years, but most individuals were <20 years. Length and weight at age data were used to fit growth models. No differences between sexes in length and weight at age were observed. The majority of samples had a surplus of males. Diet analysis showed that H. macrochir feeds on Crustacea, Teleostei, Polychaeta, and Cephalopoda, but few prey could be identified to lower taxonomical levels. The mid-Atlantic Ridge constitutes a major portion of the North Atlantic living space of the abyssal halosaur where it completes its full life cycle, primarily as an actively foraging euryophagous micronekton/epibenthos and infauna feeder, becoming a partial piscivore with increasing size.

  9. Biological dosimetric studies in the Chernobyl radiation accident, on populations living in the contaminated areas (Gomel regions) and in Estonian clean-up workers, using FISH technique

    International Nuclear Information System (INIS)

    Darroudi, F.; Natarajan, A.T.

    1996-01-01

    In order to perform retrospective estimations of radiation doses seven years after the nuclear accident in Chernobyl, the frequencies of chromosomal aberrations in the peripheral blood lymphocytes of individuals living in contaminated areas around Chernobyl and the Estonian clean-up workers were determined. The first study group composed of 45 individuals living in four areas (i.e. Rechitsa, Komsomolski, Choiniki and Zaspa) in the vicinity (80-125 km) of Chernobyl and 20 individuals living in Minsk (control group - 340 km from Chernobyl). The second study group (Estonian clean-up workers) composed of 26 individuals involved in cleaning up the Chernobyl for a different period of time (up to 7 months) and a matched control group consisting of 9 probands. Unstable aberrations (dicentrics and rings) were scored in Giemsa stained preparations and stable aberrations (translocations) were analyzed using chromosome specific DNA libraries and fluorescence in situ hybridization (FISH) technique. For both study groups the estimated average dose is between 0,1-0,4 Gy. Among the people living in the contaminated areas in the vicinity of Chernobyl, a higher frequency of numerical aberrations (i.e. trisomy, hyper diploidy) was evident

  10. Duration of pregnancy in relation to fish oil supplementation and habitual fish intake: a randomised clinical trial with fish oil

    DEFF Research Database (Denmark)

    Olsen, Sjurdur Frodi; Østerdal, M L; Salvig, J D

    2007-01-01

    OBJECTIVE: To examine the effect of fish oil supplementation on duration of pregnancy, conditional on the woman's habitual fish intake. DESIGN: Multicentre 1:1 randomised clinical trial of effect of fish oil in a high-risk population of pregnant women in whom habitual fish intake was assessed...... at randomisation. SETTING: Nineteen university delivery wards in seven European countries. SUBJECTS: Pregnant women with preterm delivery, intrauterine growth retardation (IUGR), or pregnancy-induced hypertension (PIH) in a previous pregnancy (group 1, n=495); with twin pregnancies (group 2, n=367......); or with suspicion of IUGR or threatening preeclampsia in the current pregnancy (group 3, n=106). Women were stratified into low, middle, or high fish consumers. METHODS: The intervention group received fish oil capsules providing 2.7 g long-chain n-3 fatty acids per day (n-3 poly unsaturated fatty acids (PUFA...

  11. Fish introductions in the former Soviet Union: The Sevan trout (Salmo ischchan - 80 years later.

    Directory of Open Access Journals (Sweden)

    Wiesław Bogdanowicz

    Full Text Available The Soviet Union played the leading role in fish introductions in Eurasia. However, only 3% of all introductions prior to 1978 gave a commercial benefit. One of the noteworthy examples appears to be the Sevan trout (Salmo ischchan Kessler, 1877-an endemic salmonid of Lake Sevan in Armenia. This species has been introduced to Kirghizstan, Kazakhstan, and Uzbekistan, however, only the Kirghiz population has persisted in relatively high numbers. In this paper we provide the first extensive molecular study of S. ischchan using samples from the native population from Lake Sevan and three hatcheries in Armenia, as well as from the population introduced to Lake Issyk Kul in Kirghizstan. The Kirghiz population has been isolated since the introductions took place in 1930 and 1936. Our results, based on 11 nuclear microsatellites and a 905 bp fragment of the mitochondrial control region suggest that hatcheries have maintained genetic variability by way of ongoing translocations of individuals from Lake Sevan. Simultaneously, significant Garza-Williamson M-values suggest that bottlenecks could have reduced the genetic variability of the wild populations in the past. This hypothesis is supported by historical data, indicating highly manipulated water-level regulations and poaching as two main factors that dramatically impact fish abundance in the lake. On the other hand, a similar situation has been observed in Kirghizstan, but this population likely rebounded from small population size faster than the other populations examined. The Kirghiz population is significantly genetically differentiated from the other groups and have morphological features and biological attributes not observed in the source population. Genetic data imply that the effective population size in the native population is lower than that found in the introduced population, suggesting that some active protection of the Lake Sevan population may be needed urgently.

  12. Fatty acid compositions of preterm and term colostrum, transitional and mature milks in a sub-Saharan population with high fish intakes

    NARCIS (Netherlands)

    Kuipers, Remko S.; Luxwolda, Martine F.; Dijck-Brouwer, D. A. Janneke; Muskiet, Frits A. J.

    2012-01-01

    Background: There are no data on the fatty acid (FA) compositions of preterm and term milks for sub-Saharan African populations with advancing lactation. However, it is generally acknowledged that our ancestors evolved in sub-Saharan East-Africa, where they inhabited the land-water ecosystems.

  13. Fishing activities

    Science.gov (United States)

    Oberle, Ferdinand; Puig, Pere; Martin, Jacobo; Micallef, Aaron; Krastel, Sebastian; Savini, Alessandra

    2018-01-01

    Unlike the major anthropogenic changes that terrestrial and coastal habitats underwent during the last centuries such as deforestation, river engineering, agricultural practices or urbanism, those occurring underwater are veiled from our eyes and have continued nearly unnoticed. Only recent advances in remote sensing and deep marine sampling technologies have revealed the extent and magnitude of the anthropogenic impacts to the seafloor. In particular, bottom trawling, a fishing technique consisting of dragging a net and fishing gear over the seafloor to capture bottom-dwelling living resources has gained attention among the scientific community, policy makers and the general public due to its destructive effects on the seabed. Trawling gear produces acute impacts on biota and the physical substratum of the seafloor by disrupting the sediment column structure, overturning boulders, resuspending sediments and imprinting deep scars on muddy bottoms. Also, the repetitive passage of trawling gear over the same areas creates long-lasting, cumulative impacts that modify the cohesiveness and texture of sediments. It can be asserted nowadays that due to its recurrence, mobility and wide geographical extent, industrial trawling has become a major force driving seafloor change and affecting not only its physical integrity on short spatial scales but also imprinting measurable modifications to the geomorphology of entire continental margins.

  14. Marine Fish Hybridization

    KAUST Repository

    He, Song

    2017-04-01

    Natural hybridization is reproduction (without artificial influence) between two or more species/populations which are distinguishable from each other by heritable characters. Natural hybridizations among marine fishes were highly underappreciated due to limited research effort; it seems that this phenomenon occurs more often than is commonly recognized. As hybridization plays an important role in biodiversity processes in the marine environment, detecting hybridization events and investigating hybridization is important to understand and protect biodiversity. The first chapter sets the framework for this disseration study. The Cohesion Species Concept was selected as the working definition of a species for this study as it can handle marine fish hybridization events. The concept does not require restrictive species boundaries. A general history and background of natural hybridization in marine fishes is reviewed during in chapter as well. Four marine fish hybridization cases were examed and documented in Chapters 2 to 5. In each case study, at least one diagnostic nuclear marker, screened from among ~14 candidate markers, was found to discriminate the putative hybridizing parent species. To further investigate genetic evidence to support the hybrid status for each hybrid offspring in each case, haploweb analysis on diagnostic markers (nuclear and/or mitochondrial) and the DAPC/PCA analysis on microsatellite data were used. By combining the genetic evidences, morphological traits, and ecological observations together, the potential reasons that triggered each hybridization events and the potential genetic/ecology effects could be discussed. In the last chapter, sequences from 82 pairs of hybridizing parents species (for which COI barcoding sequences were available either on GenBank or in our lab) were collected. By comparing the COI fragment p-distance between each hybridizing parent species, some general questions about marine fish hybridization were discussed: Is

  15. A preliminary quantitative assessment of gillnet fishing in subtropical ...

    African Journals Online (AJOL)

    Between January 1998 and January 1999 a quantitative investigation was done on the fish populations of Lake Tzaneen, Northern Province, South Africa. Two graded series of multi-filament gillnets were set overnight every six weeks capturing 14 species of fish. Of the 2 692 fish caught, Schilbe intermedius was most ...

  16. The Extent of Immature Fish Harvesting by the Commercial Fishery ...

    African Journals Online (AJOL)

    The sustainability of a given fishery is a function of the number of sexually matured fish present in water. If there is intensive immature fishing, the population of fish reaching the stage of recruitment will decrease, which in turn results in lower yield and biomass. The present study was conducted to estimate the extent of ...

  17. Hunting and fishing trends in the U.S.

    Science.gov (United States)

    J. John Charbonneau; James R. Lyons

    1980-01-01

    Trends in hunting and fishing participation are evaluated on the basis of responses to a telephone survey of the U.S. population conducted as a part of the 1975 National Hunting and Fishing Survey. Probability of participation in hunting and fishing is a function of the respondent's age, sex, income, place of residence, and a number of supply characteristics. The...

  18. A Review on hematology and hemoglobin of fish

    Directory of Open Access Journals (Sweden)

    Ebru YILMAZ

    2015-01-01

    Full Text Available Determination of hematological parameters of fish living in natüre helps to recognize population and to determinate of pollutants in the aquatic environment. In this review, hematological parameters of fish, fish hemoglobin and the Bohr effect were given information.

  19. Research/Evaluate Restoration of NE Oregon Streams: Effects of Livestock Exclosures (Corridor Fencing) on Riparian Vegetation, Stream Geomorphic Features and Fish Populations; Final Report 2002.

    Energy Technology Data Exchange (ETDEWEB)

    Kauffman, J. Boone

    2002-09-17

    The Pacific Northwest Electric Power Planning and Conservation Act of 1980 indicated ''The council shall properly develop and adopt a program to protect, mitigate, and enhance fish and wildlife, including related spawning grounds and habitat on the Columbia River and its tributaries.'' As a result, the Bonneville Power Administration (BPA) has spent millions of dollars on various instream projects throughout the Columbia Basin with the goal of increasing system-wide production of anadromous fisheries through a combination of habitat restoration and enhancement measures. For two decades, numerous BPA-funded projects have been initiated in the upper Columbia River Basin for the express intent of improving the aquatic habitats of anadromous salmonids. Largely missing from most of these projects has been any rigorous evaluation of project success or failure. Some field reviews of some habitat projects have been undertaken (e.g., Beschta et al. 1991, Kauffman et al. 1993) and provide an overview of major problems and opportunities associated with selected projects. However, there continues to be a lack of quantifiable information, collected in a systematic manner that could be used as the basis for scientifically assessing the effects of individual projects on riparian/aquatic habitats, functions, or processes. Recent publications (e.g., NRC 1992, ISG 1996, NRC 1996, Beschta 1997, and Kauffman et al. 1997) have identified and summarized important concepts associated with the restoration and improvement of aquatic ecosystems. While such conceptual approaches provide an important structure for those undertaking restoration efforts, there remains a paucity of basic information throughout the upper Columbia Basin on the hydrologic, geomorphic, and biologic responses that occur from various enhancement approaches. Basic data on the spatial and temporal responses of restoration approaches would provide: (1) a better understanding of project effects upon

  20. Monitoring fish distributions along electrofishing segments

    Science.gov (United States)

    Miranda, Leandro E.

    2014-01-01

    Electrofishing is widely used to monitor fish species composition and relative abundance in streams and lakes. According to standard protocols, multiple segments are selected in a body of water to monitor population relative abundance as the ratio of total catch to total sampling effort. The standard protocol provides an assessment of fish distribution at a macrohabitat scale among segments, but not within segments. An ancillary protocol was developed for assessing fish distribution at a finer scale within electrofishing segments. The ancillary protocol was used to estimate spacing, dispersion, and association of two species along shore segments in two local reservoirs. The added information provided by the ancillary protocol may be useful for assessing fish distribution relative to fish of the same species, to fish of different species, and to environmental or habitat characteristics.

  1. Fish tapeworm infection

    Science.gov (United States)

    Fish tapeworm infection is an intestinal infection with a parasite found in fish. ... The fish tapeworm ( Diphyllobothrium latum ) is the largest parasite that infects humans. Humans become infected when they eat raw ...

  2. Quantum steganography using prior entanglement

    International Nuclear Information System (INIS)

    Mihara, Takashi

    2015-01-01

    Steganography is the hiding of secret information within innocent-looking information (e.g., text, audio, image, video, etc.). A quantum version of steganography is a method based on quantum physics. In this paper, we propose quantum steganography by combining quantum error-correcting codes with prior entanglement. In many steganographic techniques, embedding secret messages in error-correcting codes may cause damage to them if the embedded part is corrupted. However, our proposed steganography can separately create secret messages and the content of cover messages. The intrinsic form of the cover message does not have to be modified for embedding secret messages. - Highlights: • Our steganography combines quantum error-correcting codes with prior entanglement. • Our steganography can separately create secret messages and the content of cover messages. • Errors in cover messages do not have affect the recovery of secret messages. • We embed a secret message in the Steane code as an example of our steganography

  3. Quantum steganography using prior entanglement

    Energy Technology Data Exchange (ETDEWEB)

    Mihara, Takashi, E-mail: mihara@toyo.jp

    2015-06-05

    Steganography is the hiding of secret information within innocent-looking information (e.g., text, audio, image, video, etc.). A quantum version of steganography is a method based on quantum physics. In this paper, we propose quantum steganography by combining quantum error-correcting codes with prior entanglement. In many steganographic techniques, embedding secret messages in error-correcting codes may cause damage to them if the embedded part is corrupted. However, our proposed steganography can separately create secret messages and the content of cover messages. The intrinsic form of the cover message does not have to be modified for embedding secret messages. - Highlights: • Our steganography combines quantum error-correcting codes with prior entanglement. • Our steganography can separately create secret messages and the content of cover messages. • Errors in cover messages do not have affect the recovery of secret messages. • We embed a secret message in the Steane code as an example of our steganography.

  4. Prior information in structure estimation

    Czech Academy of Sciences Publication Activity Database

    Kárný, Miroslav; Nedoma, Petr; Khailova, Natalia; Pavelková, Lenka

    2003-01-01

    Roč. 150, č. 6 (2003), s. 643-653 ISSN 1350-2379 R&D Projects: GA AV ČR IBS1075102; GA AV ČR IBS1075351; GA ČR GA102/03/0049 Institutional research plan: CEZ:AV0Z1075907 Keywords : prior knowledge * structure estimation * autoregressive models Subject RIV: BC - Control Systems Theory Impact factor: 0.745, year: 2003 http://library.utia.cas.cz/separaty/historie/karny-0411258.pdf

  5. Fish welfare: Fish capacity to experience pain

    Directory of Open Access Journals (Sweden)

    Vučinić Marijana

    2009-01-01

    Full Text Available Teleost fish possess similar nociceptive processing systems to those found in terrestrial vertebrates. It means that they react to potential painful stimuli in a similar manner as mammals and birds. However, the welfare of fish has been the focus of less research than that of higher vertebrates. Humans may affect the welfare of fish through fisheries, aquaculture and a number of other activities. There is scientific evidence to support the assumption that fish have the capacity to experience pain because they possess functional nociceptors, endogenous opioids and opioid receptors, brain structures involved in pain processing and pathways leading from nociceptors to higher brain structures. Also, it is well documented that some anaesthetics and analgesics may reduce nociceptive responses in fish. Behavioural indicators in fish such as lip-rubbing and rocking behaviours are the best proof that fish react to potential painful stimuli. This paper is an overview of some scientific evidence on fish capacity to experience pain.

  6. Inter-population thermal variability and physiological response in the intertidal fish Scartichthys viridis (Blenniidae Variabilidad térmica intrapoblacional y respuesta fisiológica en el pez intermareal Scartichthys viridis (Blenniidae

    Directory of Open Access Journals (Sweden)

    JOSÉ M PULGAR

    2007-12-01

    Full Text Available Determining habitat conditions that generate individual physiological variability represents key basic knowledge to understand the direction of animal's responses to habitat change. The coastal fish Scartichthys viridis inhabits low intertidal pools along the Chilean coast. Because seawater in the low intertidal is renewed during every tidal cycle, this zone is characterized by a low thermal variation and abundant food within and between localities. We evaluated whether seawater thermal conditions and food availability of low intertidal pools registered in three localities of Chilean coast are sufficient to generate physiological and energetic differences in individuals of S. viridis captured from three geographic separate populations spanning approximately 1,200 km. Southern fishes acclimatized to 25 °C showed higher metabolic rates than those from other localities and thermal treatments. On the other hand, southern fishes in natural conditions showed higher condition factor than northern fishes. This evidence is sufficient to indicate that slight latitudinal differences in tidepool seawater temperature associated to differential food availability induced an energetic constraint in this species. Moreover, southern population of S. viridis may suffer important effects on energetic allocation if seawater temperature increases slightly, with repercussions on its geographic distribution in southern Pacific OceanDeterminar las condiciones del ambiente que generan variabilidad fisiológica, representa un conocimiento básico para comprender el sentido de la respuesta de los animales a los cambios en su habitat. El pez costero Scartichthys viridis habita las pozas bajas del intermareal a lo largo de la costa chilena. Debido a que el agua de mar se renueva en cada ciclo de marea en las pozas bajas, esta zona está caracterizada por una baja variación térmica y abundante alimento entre localidades. Nosotros evaluamos si las condiciones térmicas y la

  7. Clinical implications in the prevalence and associated cardiovascular factors of elevated serum alanine aminotransferase levels among elderly agricultural and fishing population in Taipei, Taiwan: experience at a teaching hospital.

    Science.gov (United States)

    Chen, Yu-Fen; Hu, Yi-Chun; Shen, Hsi-Che; Chang, Hui-Te; Tung, Tao-Hsin

    2014-01-01

    To discuss the prevalence and associated factors related to an elevated serum alanine aminotransferase (ALT) level among the elderly agricultural and fishing population. A total of 6542 (3989 males and 2553 females) healthy adults voluntarily admitted to a teaching hospital for a physical checkup in 2010 in Taipei, Taiwan. Fasting blood samples were drawn via venipuncture, and clinical nurses interviewed the study participants using a structured questionnaire from. The overall prevalence of an elevated serum ALT level was 18.2% and revealed a statistically significant decrease with increasing age (P < 0.001). The men exhibited a higher prevalence than the women (19.7% vs 15.9%; P < 0.001). Male sex; younger age; and presence of obesity, hypertension, hyperuricemia, and hypoalbuminemia were significantly associated with an elevated serum ALT level. Sex-related differences were also revealed. For the men, type 2 diabetes (odds ratio [OR], 1.23; 95% confidence interval [CI], 1.02-1.57), hypercholesterolemia (OR, 1.78; 95% CI, 1.22-2.83), hypertriglyceridemia (OR, 1.32; 95% CI, 1.04-1.73), and low high-density lipoprotein (OR, 1.26; 95% CI, 1.05-1.51) were significantly related to an elevated serum ALT level, but this was not so for the women. The disparity of ALT in age groups was revealed. Several sex-related differences were indicated pertaining to the prevalence of an elevated serum ALT level among elderly specific occupational population.

  8. Fish for Feed vs Fish for Food

    OpenAIRE

    Allan, Geoff L.

    2004-01-01

    Aquaculture is the fastest-growing food producing industry sector in the world. Demand for feed ingredients, particularly for preferred protein sources such as fishmeal, fish oil and ‘trash fish’, has also increased, raising questions about sustainability and uses of fish for aquaculture feeds or directly as human food. Approximately 30 million metric tonnes (MMT) of fish from capture fisheries are used each year to produce fishmeal and fish oil. The species used are not usually consumed dire...

  9. Microbiological spoilage of fish and fish products.

    Science.gov (United States)

    Gram, L; Huss, H H

    1996-11-01

    Spoilage of fresh and lightly preserved fish products is caused by microbial action. This paper reviews the current knowledge in terms of the microbiology of fish and fish products with particular emphasis on identification of specific spoilage bacteria and the qualitative and quantitative biochemical indicators of spoilage. Shewanella putrefaciens and Pseudomonas spp. are the specific spoilage bacteria of iced fresh fish regardless of the origin of the fish. Modified atmosphere stored marine fish from temperate waters are spoiled by the CO2 resistant Photobacterium phosphoreum whereas Gram-positive bacteria are likely spoilers of CO2 packed fish from fresh or tropical waters. Fish products with high salt contents may spoil due to growth of halophilic bacteria (salted fish) or growth of anaerobic bacteria and yeasts (barrel salted fish). Whilst the spoilage of fresh and highly salted fish is well understood, much less is known about spoilage of lightly preserved fish products. It is concluded that the spoilage is probably caused by lactic acid bacteria, certain psychotrophic Enterobacteriaceae and/or Photobacterium phosphoreum. However, more work is needed in this area.

  10. Fishing Fish Stem Cells and Nuclear Transplants

    OpenAIRE

    Hong, Yunhan

    2011-01-01

    Fish has been the subject of various research fields, ranging from ecology, evolution, physiology and toxicology to aquaculture. In the past decades fish has attracted considerable attention for functional genomics, cancer biology and developmental genetics, in particular nuclear transfer for understanding of cytoplasmic-nuclear relationship. This special issue reports on recent progress made in fish stem cells and nuclear transfer.

  11. A test of genetic association among male nuptial coloration, female mating preference, and male aggression bias within a polymorphic population of cichlid fish

    Directory of Open Access Journals (Sweden)

    Inke van der SLUIJS, Peter D. DIJKSTRA, Charlotte M. LINDEYER et al.

    2013-04-01

    Full Text Available Both inter- and intrasexual selection have been implicated in the origin and maintenance of species-rich taxa with diverse sexual traits. Simultaneous disruptive selection by female mate choice and male-male competition can, in theory, lead to speciation without geographical isolation if both act on the same male trait. Female mate choice can generate discontinuities in gene flow, while male-male competition can generate negative frequency-dependent selection stabilizing the male trait polymorphism. Speciation may be facilitated when mating preference and/or aggression bias are physically linked to the trait they operate on. We tested for genetic associations among female mating preference, male aggression bias and male coloration in the Lake Victoria cichlid Pundamilia. We crossed females from a phenotypically variable population with males from both extreme ends of the phenotype distribution in the same population (blue or red. Male offspring of a red sire were significantly redder than males of a blue sire, indicating that intra-population variation in male coloration is heritable. We tested mating preferences of female offspring and aggression biases of male offspring using binary choice tests. There was no evidence for associations at the family level between female mating preferences and coloration of sires, but dam identity had a significant effect on female mate preference. Sons of the red sire directed significantly more aggression to red than blue males, whereas sons of the blue sire did not show any bias. There was a positive correlation among individuals between male aggression bias and body coloration, possibly due to pleiotropy or physical linkage, which could facilitate the maintenance of color polymorphism [Current Zoology 59 (2: 221-229, 2013].

  12. [Assessment of individual iodine intake by the adult population in the Potsdam region on the basis of sea fish and iodized salt consumption].

    Science.gov (United States)

    Pfaff, G; Georg, T

    1995-06-01

    Iodized salt has a high acceptance in the Potsdam region: 82% of the interviewed people use iodized salt, 13% do not use it, and only 5% of the probands were not able to make any statements. The current average iodine intake for adults is 76 micrograms/day. Only 5% of the adult population has an iodine intake of more than 100 micrograms/day. An efficient elimination of iodine deficiency in Germany requires a broad usage of iodized salt in the food industry.

  13. Relating fish health and reproductive metrics to contaminant bioaccumulation at the Tennessee Valley Authority Kingston coal ash spill site.

    Science.gov (United States)

    Pracheil, Brenda M; Marshall Adams, S; Bevelhimer, Mark S; Fortner, Allison M; Greeley, Mark S; Murphy, Cheryl A; Mathews, Teresa J; Peterson, Mark J

    2016-08-01

    A 4.1 million m(3) coal ash release into the Emory and Clinch rivers in December 2008 at the Tennessee Valley Authority's Kingston Fossil Plant in east Tennessee, USA, prompted a long-term, large-scale biological monitoring effort to determine if there are chronic effects of this spill on resident biota. Because of the magnitude of the ash spill and the potential for exposure to coal ash-associated contaminants [e.g., selenium (Se), arsenic (As), and mercury (Hg)] which are bioaccumulative and may present human and ecological risks, an integrative, bioindicator approach was used. Three species of fish were monitored-bluegill (Lepomis macrochirus), redear sunfish (L. microlophus), and largemouth bass (Micropterus salmoides)-at ash-affected and reference sites annually for 5 years following the spill. On the same individual fish, contaminant burdens were measured in various tissues, blood chemistry parameters as metrics of fish health, and various condition and reproduction indices. A multivariate statistical approach was then used to evaluate relationships between contaminant bioaccumulation and fish metrics to assess the chronic, sub-lethal effects of exposure to the complex mixture of coal ash-associated contaminants at and around the ash spill site. This study suggests that while fish tissue concentrations of some ash-associated contaminants are elevated at the spill site, there was no consistent evidence of compromised fish health linked with the spill. Further, although relationships between elevated fillet burdens of ash-associated contaminants and some fish metrics were found, these relationships were not indicative of exposure to coal ash or spill sites. The present study adds to the weight of evidence from prior studies suggesting that fish populations have not incurred significant biological effects from spilled ash at this site: findings that are relevant to the current national discussions on the safe disposal of coal ash waste.

  14. Fish under exercise

    NARCIS (Netherlands)

    Palstra, A.P.; Planas, J.V.

    2011-01-01

    Improved knowledge on the swimming physiology of fish and its application to fisheries science and aquaculture (i.e., farming a fitter fish) is currently needed in the face of global environmental changes, high fishing pressures, increased aquaculture production as well as increased concern on fish

  15. Meet the surrogate fish

    International Nuclear Information System (INIS)

    Johnson, Bob; Neitzel, Duane; Moxon, Suzanne

    1999-01-01

    This article gives details of the US Department of Energy's innovative research into the development of a sensor system that will work as a surrogate fish to provide information to aid the design of fish-friendly turbines for hydroelectric power plants. The selection of the dams for the testing of sensor fish, the release and recovery of the sensor fish, the recording of the physical forces exerted on fish as they pass through the turbines, and use of the information gathered to build more sensor fish are discussed. Fish investigations conducted at the Pacific Northwest National Laboratory are briefly described. (UK)

  16. Plastic fish

    CERN Multimedia

    Antonella Del Rosso

    2015-01-01

    In terms of weight, the plastic pollution in the world’s oceans is estimated to be around 300,000 tonnes. This plastic comes from both land-based and ocean-based sources. A lecture at CERN by chemist Wolfgang Trettnak addressed this issue and highlighted the role of art in raising people’s awareness.   Artwork by Wolfgang Trettnak. Packaging materials, consumer goods (shoes, kids’ toys, etc.), leftovers from fishing and aquaculture activities… our oceans and beaches are full of plastic litter. Most of the debris from beaches is plastic bottles. “PET bottles have high durability and stability,” explains Wolfgang Trettnak, a chemist by education and artist from Austria, who gave a lecture on this topic organised by the Staff Association at CERN on 26 May. “PET degrades very slowly and the estimated lifetime of a bottle is 450 years.” In addition to the beach litter accumulated from human use, rivers bring several ki...

  17. Muscle dynamics in fish during steady swimming

    DEFF Research Database (Denmark)

    Shadwick, RE; Steffensen, JF; Katz, SL

    1998-01-01

    SYNOPSIS. Recent research in fish locomotion has been dominated by an interest in the dynamic mechanical properties of the swimming musculature. Prior observations have indicated that waves of muscle activation travel along the body of an undulating fish faster than the resulting waves of muscular...... position in swimming fish. Quantification of muscle contractile properties in cyclic contractions relies on in vitro experiments using strain and activation data collected in vivo. In this paper we discuss the relation between these parameters and body kinematics. Using videoradiographic data from swimming...... constant cross-section of red muscle along much of the body suggests that positive power for swimming is generated fairly uniformly along the length of the fish....

  18. Three Kinds of Fish

    DEFF Research Database (Denmark)

    Høst, Jeppe Engset

    2012-01-01

    There are three kinds of fish. Fish you were given, fish you bought and fish you lease. This might sound a bit odd, but it is nevertheless the basis for the activities of Danish commercial fishers since the introduction of transferable fishing concessions (TFCs) in 2007. In the current 2012 reform...... of market based systems are wild speculation, concentration and monopolization of fishing access and subsequent leasing with fishing communities and new entrants very likely being worse off (see for example the chapter “From fishing rights to financial derivatives” is this volume or Olson 2011; Sumaila 2010...... will examine five Danish fishing operations and discuss how they have reacted in different ways to the newly introduced system of transferable fishing concessions. By introducing TFCs as a solution to fleet overcapacity, the EU Commission will also be introducing a system where buying, selling and leasing...

  19. Habitat degradation and fishing effects on the size structure of coral reef fish communities.

    Science.gov (United States)

    Wilson, S K; Fisher, R; Pratchett, M S; Graham, N A J; Dulvy, N K; Turner, R A; Cakacaka, A; Polunin, N V C

    2010-03-01

    Overfishing and habitat degradation through climate change pose the greatest threats to sustainability of marine resources on coral reefs. We examined how changes in fishing pressure and benthic habitat composition influenced the size spectra of island-scale reef fish communities in Lau, Fiji. Between 2000 and 2006 fishing pressure declined in the Lau Islands due to declining human populations and reduced demand for fresh fish. At the same time, coral cover declined and fine-scale architectural complexity eroded due to coral bleaching and outbreaks of crown-of-thorns starfish, Acanthaster planci. We examined the size distribution of reef fish communities using size spectra analysis, the linearized relationship between abundance and body size class. Spatial variation in fishing pressure accounted for 31% of the variation in the slope of the size spectra in 2000, higher fishing pressure being associated with a steeper slope, which is indicative of fewer large-bodied fish and/or more small-bodied fish. Conversely, in 2006 spatial variation in habitat explained 53% of the variation in the size spectra slopes, and the relationship with fishing pressure was much weaker (approximately 12% of variation) than in 2000. Reduced cover of corals and lower structural complexity was associated with less steep size spectra slopes, primarily due to reduced abundance of fish < 20 cm. Habitat degradation will compound effects of fishing on coral reefs as increased fishing reduces large-bodied target species, while habitat loss results in fewer small-bodied juveniles and prey that replenish stocks and provide dietary resources for predatory target species. Effective management of reef resources therefore depends on both reducing fishing pressure and maintaining processes that encourage rapid recovery of coral habitat.

  20. THREATENED FISHES OF THE WORLD: Chondrostoma kinzelbachi KRUPP, 1985 (CYPRINIDAE

    Directory of Open Access Journals (Sweden)

    Gulnaz Özcan

    2013-01-01

    Full Text Available Orontes nase, Chondrostoma kinzelbachi is an endangered freshwater fish species in Turkey and Syria. Populations are declining due to dam construction and water pollution. Orontes nase populations should be completely protected.

  1. Semiquantitative mercury determination in fish: a tool for poisoning prevention

    Directory of Open Access Journals (Sweden)

    YALLOUZ ALLEGRA V.

    2002-01-01

    Full Text Available Human exposure to mercury intoxication through contaminated fish ingestion has been well studied, mainly among Japanese population. The Brazilian population, particulaly in the Amazon region, is now in focus due to findings of fish contamination. Major health impacts caused by mercury affect mostly people who have a regular fish diet. A continuous checking for mercury content in the most consumed fish could prevent human intoxication. A simple, non-instrumental method to allow a continuous checking of the mercury content in fish was developed. Based on this method, we are proposing a prevention action where community agents can be trained to perform fish analysis. Technical Schools and Universities located nearby the affected areas would be in charge of quality control programs for the fish analysis as well as for the selection, training and update for operators.

  2. Effects of fish oil type, lipid antioxidants and presence of rapeseed oil on oxidative flavour stability of fish oil enriched milk

    DEFF Research Database (Denmark)

    Bruni Let, Mette; Jacobsen, Charlotte; Meyer, Anne S.

    2004-01-01

    As a part of our ongoing experiments on optimization of the oxidative stability of fish oils in genuine food systems, this study investigated the oxidative deterioration of fish oil enriched milk emulsions during cold storage. The experimental data showed that addition of rapeseed oil to fish oil...... (1:1) prior to emulsification into milk significantly protected the emulsions against oxidative deterioration. Addition of propyl gallate and a citric acid ester to the fish oil prior to emulsification also protected the fish oil enriched milk during storage. Emulsions containing a rapeseed:fish oil...... mixture were oxidatively stable during 11 d at 2 øC. Thus, no additional inhibitory effect of the added antioxidants was observed. The peroxide value and concentrations of five selected volatiles derived from n- 3 PUFA degradation in rapeseed:fish oil mixture emulsions were not significantly different...

  3. The utility of transcriptomics in fish conservation.

    Science.gov (United States)

    Connon, Richard E; Jeffries, Ken M; Komoroske, Lisa M; Todgham, Anne E; Fangue, Nann A

    2018-01-29

    There is growing recognition of the need to understand the mechanisms underlying organismal resilience (i.e. tolerance, acclimatization) to environmental change to support the conservation management of sensitive and economically important species. Here, we discuss how functional genomics can be used in conservation biology to provide a cellular-level understanding of organismal responses to environmental conditions. In particular, the integration of transcriptomics with physiological and ecological research is increasingly playing an important role in identifying functional physiological thresholds predictive of compensatory responses and detrimental outcomes, transforming the way we can study issues in conservation biology. Notably, with technological advances in RNA sequencing, transcriptome-wide approaches can now be applied to species where no prior genomic sequence information is available to develop species-specific tools and investigate sublethal impacts that can contribute to population declines over generations and undermine prospects for long-term conservation success. Here, we examine the use of transcriptomics as a means of determining organismal responses to environmental stressors and use key study examples of conservation concern in fishes to highlight the added value of transcriptome-wide data to the identification of functional response pathways. Finally, we discuss the gaps between the core science and policy frameworks and how thresholds identified through transcriptomic evaluations provide evidence that can be more readily used by resource managers. © 2018. Published by The Company of Biologists Ltd.

  4. Perfluoroalkyl substances and fish consumption.

    Science.gov (United States)

    Christensen, Krista Y; Raymond, Michelle; Blackowicz, Michael; Liu, Yangyang; Thompson, Brooke A; Anderson, Henry A; Turyk, Mary

    2017-04-01

    Perfluoroalkyl substances (PFAS) are an emerging class of contaminants. Certain PFAS are regulated or voluntarily limited due to concern about environmental persistence and adverse health effects, including thyroid disease and dyslipidemia. The major source of PFAS exposure in the general population is thought to be consumption of seafood. In this analysis we examine PFAS levels and their determinants, as well as associations between PFAS levels and self-reported fish and shellfish consumption, using a representative sample of the U.S. Data on PFAS levels and self-reported fish consumption over the past 30 days were collected from the 2007-2008, 2009-2010, 2011-2012, and 2013-2014 cycles of the National Health and Nutrition Examination Survey. Twelve different PFAS were measured in serum samples from participants. Ordinary least squares regression models were used to identify factors (demographic characteristics and fish consumption habits) associated with serum PFAS concentrations. Additional models were further adjusted for other potential exposures including military service and consumption of ready-to-eat and fast foods. Seven PFAS were detected in at least 30% of participants and were examined in subsequent analyses (PFDA, PFOA, PFOS, PFHxS, MPAH, PFNA, PFUA). The PFAS with the highest concentrations were PFOS, followed by PFOA, PFHxS and PFNA (medians of 8.3, 2.7, 1.5 and 1.0ng/mL). Fish consumption was generally low, with a median of 1.2 fish meals and 0.14 shellfish meals, reported over the past 30 days. After adjusting for demographic characteristics, total fish consumption was associated with reduced MPAH, and with elevated PFDE, PFNA and PFuDA. Shellfish consumption was associated with elevations of all PFAS examined except MPAH. Certain specific fish and shellfish types were also associated with specific PFAS. Adjustment for additional exposure variables resulted in little to no change in effect estimates for seafood variables. PFAS are emerging

  5. Temporal and spatial changes in the copepod community during the 1974-1998 spring seasons in the Kuroshio region; a time period of profound changes in pelagic fish populations

    Science.gov (United States)

    Miyamoto, Hiroomi; Itoh, Hiroshi; Okazaki, Yuji

    2017-10-01

    The long-term change (1974-1998) of the pelagic copepod community in the Kuroshio region, western Pacific was examined in archival samples collected both day and night in April/May in a time period of profound changes in the pelagic fish populations. A total of 162 adult copepod species was found. The community analysis based on species composition and abundance of adult copepods identified five assemblages (A-E) by cluster analysis. These assemblages were distributed in the north-frontal area of the Kuroshio Current within the slope area (A), the Kuroshio axis area (B), the subtropical area (C, D), and the coastal area within the slope area (E), indicating that such diverse communities were formed to correspond with the gradual change in the oceanic environment across the Kuroshio Current. The abundance of copepods in the north-frontal area of the Kuroshio Current (A) was 1.6 times greater than that of the other assemblages. Kuroshio/subtropical species were abundant in the assemblage, suggesting that these species that were transported from the Kuroshio and/or subtropical regions increased in the slope region. Abundance and species richness of two assemblages (C, D), which were found in the subtropical areas were higher at night (C) than during the day (D), suggesting that diel vertical migration of copepods is one of the most important factors affecting changes in the community. Furthermore, a generalized additive model revealed that the most dominant subtropical/Kuroshio species increased in years in which the Kuroshio Current flowed further south, with the Kuroshio axis located far from the Japanese coast. In contrast, the model showed that the lower latitude of the Kuroshio axis positioned negatively affected coastal-dominant species, such as Paracalanus parvus sensu lato (s.l.). These results indicate that onshore-offshore shifts of the Kuroshio axis caused by Kuroshio meandering was an important factor involved in the inter-annual change in the copepod

  6. On the prior probabilities for two-stage Bayesian estimates

    International Nuclear Information System (INIS)

    Kohut, P.

    1992-01-01

    The method of Bayesian inference is reexamined for its applicability and for the required underlying assumptions in obtaining and using prior probability estimates. Two different approaches are suggested to determine the first-stage priors in the two-stage Bayesian analysis which avoid certain assumptions required for other techniques. In the first scheme, the prior is obtained through a true frequency based distribution generated at selected intervals utilizing actual sampling of the failure rate distributions. The population variability distribution is generated as the weighed average of the frequency distributions. The second method is based on a non-parametric Bayesian approach using the Maximum Entropy Principle. Specific features such as integral properties or selected parameters of prior distributions may be obtained with minimal assumptions. It is indicated how various quantiles may also be generated with a least square technique

  7. Impact of entrainment and impingement on fish populations in the Hudson River Estuary. Volume II. Impingement impact analyses, evaluations of alternative screening devices, and critiques of utility testimony relating to density-dependent growth, the age-composition of the striped bass spawning stock, and the LMS real-time life cycle model

    International Nuclear Information System (INIS)

    Barnthouse, L.W.; Van Winkle, W.; Golumbek, J.; Cada, G.F.; Goodyear, C.P.; Christensen, S.W.; Cannon, J.B.; Lee, D.W.

    1982-04-01

    This volume includes a series of four exhibits relating to impacts of impingement on fish populations, together with a collection of critical evaluations of testimony prepared for the utilities by their consultants. The first exhibit is a quantitative evaluation of four sources of bias (collection efficiency, reimpingement, impingement on inoperative screens, and impingement survival) affecting estimates of the number of fish killed at Hudson River power plants. The two following exhibits contain, respectively, a detailed assessment of the impact of impingement on the Hudson River white perch population and estimates of conditional impingement mortality rates for seven Hudson River fish populations. The fourth exhibit is an evaluation of the engineering feasibility and potential biological effectiveness of several types of modified intake structures proposed as alternatives to cooling towers for reducing impingement impacts. The remainder of Volume II consists of critical evaluations of the utilities' empirical evidence for the existence of density-dependent growth in young-of-the-year striped bass and white perch, of their estimate of the age-composition of the striped bass spawning stock in the Hudson River, and of their use of the Lawler, Matusky, and Skelly (LMS) Real-Time Life Cycle Model to estimate the impact of entrainment and impingement on the Hudson River striped bass population

  8. The Bacterial Microflora of Fish, Revised

    Directory of Open Access Journals (Sweden)

    B. Austin

    2006-01-01

    Full Text Available The results of numerous studies indicate that fish possess bacterial populations on or in their skin, gills, digestive tract, and light-emitting organs. In addition, the internal organs (kidney, liver, and spleen of healthy fish may contain bacteria, but there is debate about whether or not muscle is actually sterile. Using traditional culture-dependent techniques, the numbers and taxonomic composition of the bacterial populations generally reflect those of the surrounding water. More modern culture-independent approaches have permitted the recognition of previously uncultured bacteria. The role of the organisms includes the ability to degrade complex molecules (therefore exercising a potential benefit in nutrition, to produce vitamins and polymers, and to be responsible for the emission of light by the light-emitting organs of deep-sea fish. Taxa, including Pseudomonas, may contribute to spoilage by the production of histamines in fish tissue.

  9. Sub-indicator: Prey fish

    Science.gov (United States)

    Weidel, Brian C.; Dunlop, Erin

    2017-01-01

    , native species in Lake Huron comprised less than 10% of the community in 1970, but since alewife have declined, now represent nearly 80% of the community (Figure 2). Prey fish data are most consistent for in-lake populations, which are reported here; data from connecting channels was not consistently available across the basin. Abundance was not used to judge prey fish status since successful, basin-wide management actions, including mineral nutrient input reductions and piscivore restoration, both inherently reduce prey fish abundance. However, recent abundance trends as they relate to predator prey balance are referenced, such as in Lakes Michigan and Huron where piscivore stocking is being reduced to lower predation demand on prey fish populations and maintain sport fisheries.

  10. Contribution of conservation genetics in assessing neotropical freshwater fish biodiversity

    Directory of Open Access Journals (Sweden)

    NM. Piorski

    Full Text Available Human activities have a considerable impact on hydrographic systems and fish fauna. The present review on conservation genetics of neotropical freshwater fish reveals that DNA analyses have been promoting increased knowledge on the genetic structure of fish species and their response to environmental changes. This knowledge is fundamental to the management of wild fish populations and the establishment of Evolutionary Significant Units capable of conserving genetic integrity. While population structuring can occur even in long-distance migratory fish, isolated populations can show reduced genetic variation and be at greater risk of extinction. Phylogeography and phylogeny have been powerful tools in understanding the evolution of fish populations, species and communities in distinct neotropic environments. Captive fish can be used to introduce new individuals and genes into the wild and their benefits and disadvantages can be monitored through genetic analysis. Understanding how fish biodiversity in neotropical freshwaters is generated and maintained is highly important, as these habitats are transformed by human development and fish communities are increasingly exploited as food sources to sustain a growing human population.

  11. Prior experience, cognitive perceptions and psychological skills of ...

    African Journals Online (AJOL)

    The objective of this study was to investigate the interaction between the prior experience, cognitive perceptions and psychological skills of senior rugby players in South Africa. The study population included 139 trans-national players, 106 provincial players and 95 club rugby players (N=340). A cross-sectional design was ...

  12. Fish, seafood and food from inland waters

    International Nuclear Information System (INIS)

    Feldt, A.

    1985-01-01

    Systematic monitoring of fish for radioactive nuclides yields data on the radiation exposure of the population as a consequence of fish consumption, and information on radioecological parameters (uptake by ingestion). Radioecological investigations have been made in the environment of nuclear installations and in marine regions where dumping of radioactive solid wastes was known to have been done. The paper reports on whole-fish monitoring for contamination with Sr-90 and Cs-137, and on examinations of pikes in the Kolksee of Northern Germany, for Cs-137 contamination. (DG) [de

  13. Colville Tribal Fish Hatchery, 2000-2001 Annual Report.

    Energy Technology Data Exchange (ETDEWEB)

    Arteburn, John; Christensen, David (Colville Confederated Tribes, Nespelem, WA)

    2003-03-01

    Federal hydropower projects as well as private power utility systems have had a devastating impact upon anadromous fish resources that once flourished in the Columbia River and it's tributaries. Several areas were completely blocked to anadromous fish by dams, causing the native people who's number one food resource was salmon to rely entirely upon resident fish to replace lost fisheries resources. The Colville Tribal Fish Hatchery is an artificial production program to partially mitigate for anadromous fish losses in the ''Blocked Area'' above Chief Joseph and Grand Coulee Dams pursuant to Resident Fish Substitution Policy of the Northwest Power Planning Councils Fish and Wildlife Program. The hatchery was accepted into the Council's Fish and Wildlife Program in 1984 as a resident fish substitution measure and the hatchery was completed in 1990. The minimum production quota for this facility is 22,679 kg (50,000 lbs.) of trout. To achieve this quota the Colville Tribal Hatchery was scheduled to produce 174,000 fingerling rainbow trout (5 grams/fish), 330,000 sub-yearling rainbow trout (15 grams/fish), 80,000 legal size rainbow trout (90 grams/fish), 196,000 fingerling brook trout (5 grams/fish), 330,000 subyearling brook trout (15 grams/fish) and 60,000 lahontan cutthroat trout (15 grams/fish) in 2001. All fish produced are released into reservation waters, including boundary waters in an effort to provide a successful subsistence /recreational fishery for Colville Tribal members as well as a successful non-member sport fishery. The majority of the fish distributed from the facility are intended to provide a ''carry-over'' fishery. Fish produced at the facility are intended to be capable of contributing to the natural production component of the reservation fish populations. Contribution to the natural production component will be achieved by producing and releasing fish of sufficient quality and quantity for

  14. No impact of fish oil supplements on bleeding risk

    DEFF Research Database (Denmark)

    Begtrup, Katrine Munk; Krag, Andreas Engel; Hvas, Anne-Mette

    2017-01-01

    Abstract Introduction: Fish oil supplementation may inhibit platelet aggregation and can potentially increase the risk of bleeding. The aim of the present systematic review was to evaluate the effect of fish oil supplements on haemostasis and bleeding risk, and to provide recommendations on whether...... of the included studies were randomised controlled trials or included a control group. Overall, fish oil supplements reduced platelet aggregation in healthy subjects. Fish oil exposure in surgical patients did not increase bleeding or blood transfusions either during or after surgery. Conclusion: Fish oil...... supplements reduced platelet aggregation in healthy subjects. This biochemical effect was not reflected in increased bleeding risk during or after surgery evaluated in randomised controlled trials. Consequently, this systematic review does not support the need for discontinuation of fish oil supplements prior...

  15. Evaluation of Application Space Expansion for the Sensor Fish

    Energy Technology Data Exchange (ETDEWEB)

    DeRolph, Christopher R. [Oak Ridge National Lab. (ORNL), Oak Ridge, TN (United States); Bevelhimer, Mark S. [Oak Ridge National Lab. (ORNL), Oak Ridge, TN (United States)

    2014-02-01

    The Pacific Northwest National Laboratory has developed an instrument known as the sensor fish that can be released into downstream passage routes at hydropower facilities to collect data on the physical conditions that a fish might be exposed to during passage through a turbine. The US Department of Energy Wind and Water Power Program sees value in expanding the sensor fish application space beyond large Kaplan turbines in the northwest United States to evaluate conditions to which a greater variety of fish species are exposed. Development of fish-friendly turbines requires an understanding of both physical passage conditions and biological responses to those conditions. Expanding the use of sensor fish into other application spaces will add to the knowledge base of physical passage conditions and could also enhance the use of sensor fish as a site-specific tool in mitigating potential impacts to fish populations from hydropower. The Oak Ridge National Laboratory (ORNL) National Hydropower Assessment Program (NHAAP) database contains hydropower facility characteristics that, along with national fish distribution data, were used to evaluate potential interactions between fish species and project characteristics related to downstream passage issues. ORNL developed rankings for the turbine types in the NHAAP database in terms of their potential to impact fish through injury or mortality during downstream turbine passage. National-scale fish distributions for 31 key migratory species were spatially intersected with hydropower plant locations to identify facilities where turbines with a high threat to fish injury or mortality overlap with the potential range of a sensitive fish species. A dataset was produced that identifies hydropower facilities where deployment of the sensor fish technology might be beneficial in addressing issues related to downstream fish passage. The dataset can be queried to target specific geographic regions, fish species, license expiration

  16. Hawaiian Fish Distributors Data

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — This is proprietary sales data from one Kona-based fish dealer for August 1986 to Decemeber 1988. Fishing was generally around Kona. This is Dealer Data and is...

  17. Pittsburgh Fish Fry Locations

    Data.gov (United States)

    Allegheny County / City of Pittsburgh / Western PA Regional Data Center — Lenten Fish Fry records for the Greater Pittsburgh region. Data is collected before and during the Lenten fish fry season each year by Code for Pittsburgh. Data is...

  18. Fishing fleet profiling methodology

    National Research Council Canada - National Science Library

    Ferraris, Jocelyne

    2002-01-01

    A fishing fleet profile aims tho assist in understanding the complexity and structure of fisheries from a technical and socio-economic point of view, or from the point of view of fishing strategies...

  19. Poisoning - fish and shellfish

    Science.gov (United States)

    Fish poisoning; Dinoflagellate poisoning; Seafood contamination; Paralytic shellfish poisoning; Ciguatera poisoning ... algae and algae-like organisms called dinoflagellates. Small fish that eat the algae become contaminated. If larger ...

  20. Scorpion fish sting

    Science.gov (United States)

    ... page: //medlineplus.gov/ency/article/002849.htm Scorpion fish sting To use the sharing features on this page, please enable JavaScript. Scorpion fish are members of the family Scorpaenidae, which includes ...

  1. Fish Rejections in the Marine Aquarium Trade: An Initial Case Study Raises Concern for Village-Based Fisheries.

    Directory of Open Access Journals (Sweden)

    Thane A Militz

    Full Text Available A major difficulty in managing wildlife trade is the reliance on trade data (rather than capture data to monitor exploitation of wild populations. Collected organisms that die or are rejected before a point of sale often go unreported. For the global marine aquarium trade, identifying the loss of collected fish from rejection, prior to export, is a first step in assessing true collection levels. This study takes a detailed look at fish rejections by buyers before export using the Papua New Guinea marine aquarium fishery as a case study. Utilizing collection invoices detailing the species and quantity of fish (Actinopteri and Elasmobranchii accepted or rejected by the exporting company it was determined that, over a six month period, 24.2% of the total fish catch reported (n = 13,886 was rejected. Of the ten most collected fish families, rejection frequency was highest for the Apogonidae (54.2%, Chaetodontidae (26.3%, and Acanthuridae (18.2% and lowest for Labridae (6.6% and Hemiscylliidae (0.7%. The most frequently cited reasons for rejection were fin damage (45.6% of cases, undersized fish (21.8%, and fish deemed too thin (11.1%. Despite fishers receiving feedback on invoices explaining rejections, there was no improvement in rejection frequencies over time (r = -0.33, P = 0.15 with weekly rejection frequencies being highly inconsistent (range: 2.8% to 79.4%; s = 16.3%. These findings suggest that export/import statistics can greatly underestimate collection for the marine aquarium trade as additional factors such as fisher discards, escapees, post-collection mortalities, and unregulated domestic trade would further contribute to this disparity.

  2. Effects of enhanced hydrological connectivity on Mediterranean salt marsh fish assemblages with emphasis on the endangered Spanish toothcarp (Aphanius iberus

    Directory of Open Access Journals (Sweden)

    Patricia Prado

    2017-02-01

    Full Text Available The hydrological connectivity between the salt marsh and the sea was partially restored in a Mediterranean wetland containing isolated ponds resulting from former salt extraction and aquaculture activities. A preliminary assessment provided evidence that ponds farther from the sea hosted very large numbers of the endangered Spanish toothcarp, Aphanius iberus, suggesting that individuals had been trapped and consequently reach unnaturally high densities. In order to achieve both habitat rehabilitation and toothcarp conservation, efforts were made to create a gradient of hydrologically connected areas, including isolated fish reservoirs, semi-isolated, and connected salt marsh-sea areas that could allow migratory movements of fish and provide some protection for A. iberus. The fish community was monitored prior to, and for three years after rehabilitation. Results showed an increase in the number of fish species within semi-isolated areas (Zone A, whereas areas adjacent to the sea (Zone B increased the number of marine species and decreased that of estuarine species (ES. Yet overall differences in fish assemblages were much higher between zones than among study years. Generalized linear models (GLMs evidenced that distance to the sea was the most important variable explaining the local diversity of the fish community after restoration, with occasional influence of other factors such as temperature, and depth. The abundance of A. iberus was consistently higher in semi-isolated areas at greater distances from the sea, but a decline occurred in both zones and in isolated reservoir ponds after restoration efforts, which may be attributable to interannual differences in recruitment success and, to a lesser extent, to dispersal into adjacent habitats. A negative effect of restoration works on fish population cannot be excluded, but the final outcome of the intervention likely needs a longer period.

  3. Immunity to Fish Rhabdoviruses

    OpenAIRE

    Purcell, Maureen K.; Laing, Kerry J.; Winton, James R.

    2012-01-01

    Members of the family Rhabdoviridae are single-stranded RNA viruses and globally important pathogens of wild and cultured fish and thus relatively well studied in their respective hosts or other model systems. Here, we review the protective immune mechanisms that fish mount in response to rhabdovirus infections. Teleost fish possess the principal components of innate and adaptive immunity found in other vertebrates. Neutralizing antibodies are critical for long-term protection from fish rhabd...

  4. Variability in the distribution of planktonic fish eggs and larvae in the nearshore waters off Bombay

    Digital Repository Service at National Institute of Oceanography (India)

    Gajbhiye, S.N.; Nair, V.R.; Desai, B.N.

    represented different environmental conditions. Fish eggs and larvae were common in the area of study with maximum abundance in December 1979 and April/ August 1980. Mean density of fish eggs was maximum along the Mahim transect while population of larvae...

  5. Evaluating genetic traceability methods for captive-bred marine fish and their applications in fisheries management and wildlife forensics

    OpenAIRE

    Bylemans, Jonas; Maes, Gregory E.; Diopere, Eveline; Cariani, Alessia; Senn, Helen; Taylor, Martin I.; Helyar, Sarah; Bargelloni, Luca; Bonaldo, Alessio; Carvalho, Gary; Guarniero, Ilaria; Komen, Hans; Martinsohn, Jann Th; Eg Nielsen, Einar; Tinti, Fausto

    2016-01-01

    Growing demands for marine fish products is leading to increased pressure on already depleted wild populations and a rise in aquaculture production. Consequently, more captive-bred fish are released into the wild through accidental escape or deliberate releases. The increased mixing of captive-bred and wild fish may affect the ecological and/or genetic integrity of wild fish populations. Unambiguous identification tools for captive-bred fish will be highly valuable to manage risks (fisheries ...

  6. Divergent Priors and well Behaved Bayes Factors

    NARCIS (Netherlands)

    R.W. Strachan (Rodney); H.K. van Dijk (Herman)

    2011-01-01

    textabstractDivergent priors are improper when defined on unbounded supports. Bartlett's paradox has been taken to imply that using improper priors results in ill-defined Bayes factors, preventing model comparison by posterior probabilities. However many improper priors have attractive properties

  7. Fish eye optics

    Science.gov (United States)

    Hudec, R.; Michalova, S.

    2017-07-01

    We report on small student (high—school) project of the Czech Academy of Sciences dealing with animal (fish) eyes and possible application in science and technology. Albeit most fishes have refractive eyes, the recent discoveries confirm that some fishes have reflective eyes with strange arrangements as well.

  8. Organotin intake through fish consumption in Finland

    Energy Technology Data Exchange (ETDEWEB)

    Airaksinen, Riikka, E-mail: Riikka.Airaksinen@thl.fi [National Institute for Health and Welfare, Department of Environmental Health, P.O. Box 95, FI-70701 Kuopio (Finland); Rantakokko, Panu; Turunen, Anu W.; Vartiainen, Terttu [National Institute for Health and Welfare, Department of Environmental Health, P.O. Box 95, FI-70701 Kuopio (Finland); Vuorinen, Pekka J.; Lappalainen, Antti; Vihervuori, Aune [Finnish Game and Fisheries Research Institute, Helsinki (Finland); Mannio, Jaakko [Finnish Environment Institute, Helsinki (Finland); Hallikainen, Anja [Finnish Food Safety Authority Evira, Helsinki (Finland)

    2010-08-15

    Background: Organotin compounds (OTCs) are a large class of synthetic chemicals with widely varying properties. Due to their potential adverse health effects, their use has been restricted in many countries. Humans are exposed to OTCs mostly through fish consumption. Objectives: The aim of this study was to describe OTC exposure through fish consumption and to assess the associated potential health risks in a Finnish population. Methods: An extensive sampling of Finnish domestic fish was carried out in the Baltic Sea and freshwater areas in 2005-2007. In addition, samples of imported seafood were collected in 2008. The chemical analysis was performed in an accredited testing laboratory during 2005-2008. Average daily intake of the sum of dibutyltin (DBT), tributyltin (TBT), triphenyltin (TPhT) and dioctyltin (DOT) ({Sigma}OTCs) for the Finnish population was calculated on the basis of the measured concentrations and fish consumption rates. Results: The average daily intake of {Sigma}OTCs through fish consumption was 3.2 ng/kg bw day{sup -1}, which is 1.3% from the Tolerable Daily Intake (TDI) of 250 ng/kg bw day{sup -1} set by the European Food Safety Authority. In total, domestic wild fish accounted for 61% of the {Sigma}OTC intake, while the intake through domestic farmed fish was 4.0% and the intake through imported fish was 35%. The most important species were domestic perch and imported salmon and rainbow trout. Conclusions: The Finnish consumers are not likely to exceed the threshold level for adverse health effects due to OTC intake through fish consumption.

  9. Organotin intake through fish consumption in Finland

    International Nuclear Information System (INIS)

    Airaksinen, Riikka; Rantakokko, Panu; Turunen, Anu W.; Vartiainen, Terttu; Vuorinen, Pekka J.; Lappalainen, Antti; Vihervuori, Aune; Mannio, Jaakko; Hallikainen, Anja

    2010-01-01

    Background: Organotin compounds (OTCs) are a large class of synthetic chemicals with widely varying properties. Due to their potential adverse health effects, their use has been restricted in many countries. Humans are exposed to OTCs mostly through fish consumption. Objectives: The aim of this study was to describe OTC exposure through fish consumption and to assess the associated potential health risks in a Finnish population. Methods: An extensive sampling of Finnish domestic fish was carried out in the Baltic Sea and freshwater areas in 2005-2007. In addition, samples of imported seafood were collected in 2008. The chemical analysis was performed in an accredited testing laboratory during 2005-2008. Average daily intake of the sum of dibutyltin (DBT), tributyltin (TBT), triphenyltin (TPhT) and dioctyltin (DOT) (ΣOTCs) for the Finnish population was calculated on the basis of the measured concentrations and fish consumption rates. Results: The average daily intake of ΣOTCs through fish consumption was 3.2 ng/kg bw day -1 , which is 1.3% from the Tolerable Daily Intake (TDI) of 250 ng/kg bw day -1 set by the European Food Safety Authority. In total, domestic wild fish accounted for 61% of the ΣOTC intake, while the intake through domestic farmed fish was 4.0% and the intake through imported fish was 35%. The most important species were domestic perch and imported salmon and rainbow trout. Conclusions: The Finnish consumers are not likely to exceed the threshold level for adverse health effects due to OTC intake through fish consumption.

  10. A resilience approach can improve anadromous fish restoration

    Science.gov (United States)

    Waldman, John R.; Wilson, Karen A.; Mather, Martha E.; Snyder, Noah P.

    2016-01-01

    Most anadromous fish populations remain at low levels or are in decline despite substantial investments in restoration. We explore whether a resilience perspective (i.e., a different paradigm for understanding populations, communities, and ecosystems) is a viable alternative framework for anadromous fish restoration. Many life history traits have allowed anadromous fish to thrive in unimpacted ecosystems but have become contemporary curses as anthropogenic effects increase. This contradiction creates a significant conservation challenge but also makes these fish excellent candidates for a resilience approach. A resilience approach recognizes the need to maintain life history, population, and habitat characteristics that increase the ability of a population to withstand and recover from multiple disturbances. To evaluate whether a resilience approach represents a viable strategy for anadromous fish restoration, we review four issues: (1) how resilience theory can inform anadromous fish restoration, (2) how a resilience-based approach is fundamentally different than extant anadromous fish restoration strategies, (3) ecological characteristics that historically benefited anadromous fish persistence, and (4) examples of how human impacts harm anadromous fish and how a resilience approach might produce more successful outcomes. We close by suggesting new research and restoration directions for implementation of a resilience-based approach.

  11. Fishing, fish consumption and advisory awareness among Louisiana's recreational fishers.

    Science.gov (United States)

    Katner, Adrienne; Ogunyinka, Ebenezer; Sun, Mei-Hung; Soileau, Shannon; Lavergne, David; Dugas, Dianne; Suffet, Mel

    2011-11-01

    This paper presents results from the first known population-based survey of recreational fishers in Louisiana (n=1774). The ultimate goal of this study was to obtain data in support of the development of regional advisories for a high exposure population with unique seafood consumption patterns. Between July and August of 2008, a survey was mailed to a random sample of licensed recreational fishers to characterize local fishing habits, sportfish consumption, and advisory awareness. Eighty-eight percent of respondents reported eating sportfish. Respondents ate an estimated mean of four fish meals per month, of which, approximately half were sportfish. Over half of all sportfish meals (54%) were caught in the Gulf of Mexico or bordering brackish areas. Sportfish consumption varied by license and gender; and was highest among Sportsman's Paradise license holders (2.8±0.2 meals per month), and males (2.2±0.1 meals per month). The most frequently consumed sportfish species were red drum, speckled trout, catfish, bass, crappie and bream. Advisory awareness rates varied by gender, ethnicity, geographic area, license type, age and education; and were lowest among women (53%), African-Americans (43%), fishers from the southeast of Louisiana (50%), holders of Senior Hunting and Fishing licenses (51%), individuals between 15 and 19 years of age (41%), and individuals with less than a high school education (43%). Results were used to identify ways to optimize monitoring, advisory development and outreach activities. Copyright © 2011 Elsevier Inc. All rights reserved.

  12. Use of Mathematical Optimization Models to Derive Healthy and Safe Fish Intake

    DEFF Research Database (Denmark)

    Persson, Maria; Fagt, Sisse; Pires, Sara Monteiro

    2018-01-01

    Recommended fish intake differs substantially from observed fish intake. In Denmark, ∼15% of the population consumes the state-recommended fish intake. How much fish individuals eat varies greatly, and this variation cannot be captured by considering the fish intake of the average population. We...... and 55 g/wk, respectively. Using fish intake as an example, we show how quadratic programming models may be used to advise individual consumers how to optimize their diet, taking both benefits and risks into account. This approach has the potential to increase compliance with dietary guidelines...

  13. Fecundity regulation in relation to habitat utilisation of two sympatric flounder (Platichtys flesus) populations in the brackish water Baltic Sea

    Science.gov (United States)

    Nissling, Anders; Thorsen, Anders; da Silva, Filipa F. G.

    2015-01-01

    Two populations of flounder (Platichtys flesus) with different life history traits inhabit the brackish water Baltic Sea. Both types share feeding areas in coastal waters during summer-autumn but utilise different habitats for spawning in spring, namely offshore spawning with pelagic eggs and coastal spawning with demersal eggs respectively. Fecundity regulation by atresia was assessed as prevalence (portion of fish with atresia) and intensity (calculated as the average intensity of atresia in these fish) during the reproductive cycle following start of gonad development in the autumn up to spawning in spring, and evaluated in relation to fish condition (Fulton's condition factor reflecting energy reserves of the fish) and feeding incidence of the respective population. Peaking in winter (December-February), fecundity regulation was significantly higher for coastal spawning flounder than for flounder spawning offshore. For coastal spawners, the prevalence was 45-90% with an intensity of 6.4-9.3% vs. 0-25% and an intensity of 2.1-3.4% for offshore spawners during winter. Further, fecundity regulation ceased prior to spawning for offshore spawners but continued for coastal spawners. For coastal spawners, the prevalence was 12-29% and an intensity of 2.5-6.1% during spawning. The change in fish condition was strongly related to feeding incidence and differed between populations. As feeding ceased, condition of offshore spawners decreased during winter up to spawning, whereas condition of coastal spawners decreased during autumn but was maintained as feeding started again prior to spawning. Thus, habitat utilisation according to spawning strategy affects the timing of fecundity down-regulation reflecting availability of resources, namely limited food resources in deep areas and higher availability in coastal areas. Offshore spawning flounder display characteristics typical for a capital spawner with ceasing of feeding and oocyte down-regulation well before spawning

  14. Viral replication in excised fin tissues (VREFT) corresponds with prior exposure of Pacific herring, Clupea pallasii (Valenciennes), to viral haemorrhagic septicaemia virus (VHSV)

    Science.gov (United States)

    Grady, C.A.; Gregg, J.L.; Wade, R.M.; Winton, J.R.; Hershberger, P.K.

    2011-01-01

    Procedures for a viral replication in excised fin tissue (VREFT) assay were adapted to Pacific herring, Clupea pallasii, and optimized both to reduce processing time and to provide the greatest resolution between na??ve herring and those previously exposed to viral haemorrhagic septicaemia virus (VHSV), Genogroup IVa. The optimized procedures included removal of the left pectoral fin from a euthanized fish, inoculation of the fin with >105 plaque-forming units (PFU) mL-1 VHSV for 1 h, rinsing the fin in fresh medium six times to remove unadsorbed virions, incubation of the fin in fresh medium for 4 days and enumeration of the viral titre in a sample of the incubation medium by plaque assay. The optimized VREFT assay was effective at identifying the prior exposure history of laboratory-reared Pacific herring to VHSV. The geometric mean VREFT value was significantly greater (P < 0.01) among na??ve herring (1.2 ?? 103 PFU mL-1) than among groups that survived exposure to VHSV (1.0-2.9 ?? 102 PFU mL-1); additionally, the proportion of cultures with no detectable virus was significantly greater (P = 0.0002) among fish that survived exposure to VHSV (39-47%) than among na??ve fish (3.3%). The optimized VREFT assay demonstrates promise for identifying VHSV exposure history and forecasting disease potential in populations of wild Pacific herring. ?? 2010 Blackwell Publishing Ltd.

  15. Iterated random walks with shape prior

    DEFF Research Database (Denmark)

    Pujadas, Esmeralda Ruiz; Kjer, Hans Martin; Piella, Gemma

    2016-01-01

    the parametric probability density function. Then, random walks is performed iteratively aligning the prior with the current segmentation in every iteration. We tested the proposed approach with natural and medical images and compared it with the latest techniques with random walks and shape priors......We propose a new framework for image segmentation using random walks where a distance shape prior is combined with a region term. The shape prior is weighted by a confidence map to reduce the influence of the prior in high gradient areas and the region term is computed with k-means to estimate....... The experiments suggest that this method gives promising results for medical and natural images....

  16. Changes in population structures of the major species in selected ...

    African Journals Online (AJOL)

    The study was carried out in six satellite lakes by making investigations on fish collected from experimental and artisanal fisheries. The fishes were analysed for length frequencies, weight and numbers caught to determine the population structure of the fishes. Indiscriminate fishing by deploying illegal gears and increased ...

  17. Turbine related fish mortality

    International Nuclear Information System (INIS)

    Eicher, G.J.

    1993-01-01

    A literature review was conducted to assess the factors affecting turbine-related fish mortality. The mechanics of fish passage through a turbine is outlined, and various turbine related stresses are described, including pressure and shear effects, hydraulic head, turbine efficiency, and tailwater level. The methodologies used in determining the effects of fish passage are evaluated. The necessity of adequate controls in each test is noted. It is concluded that mortality is the result of several factors such as hardiness of study fish, fish size, concentrations of dissolved gases, and amounts of cavitation. Comparisons between Francis and Kaplan turbines indicate little difference in percent mortality. 27 refs., 5 figs

  18. Do Fish Resist?

    Directory of Open Access Journals (Sweden)

    Dinesh Joseph Wadiwel

    2016-03-01

    Full Text Available There have been a number of scientific studies on the question of whether fish feel pain. Some have suggested that some fish indeed do feel pain and that this has significant welfare implications (2003. Others have argued that fish do not have the brain development necessary to feel pain. In terms of number of animals killed, the slaughter of sea animals for human consumption significantly exceeds that of any land animals that we use for food, and sea animal slaughter practices frequently lack any basic welfare protections. If fish can be shown to feel pain—or more importantly, if humans can agree that fish feel pain—then this would place a significant question mark over many contemporary fishing practices.  This article substitutes the question 'Do Fish Feel Pain?' with an alternative: 'Do Fish Resist?' It explores the conceptual problems of understanding fish resistance, and the politics of epistemology that surrounds and seeks to develop a conceptual framework for understanding fish resistance to human capture by exploring the development of fishing technologies - the hook, the net and contemporary aquaculture.

  19. Augmented fish health monitoring

    International Nuclear Information System (INIS)

    Michak, P.; Rogers, R.; Amos, K.

    1991-05-01

    The Bonneville Power Administration (BPA) initiated the Augmented Fish Health Monitoring project in 1986. This project was a five year interagency project involving fish rearing agencies in the Columbia Basin. Historically, all agencies involved with fish health in the Columbia Basin were conducting various levels of fish health monitoring, pathogen screening and collection. The goals of this project were; to identify, develop and implement a standardized level of fish health methodologies, develop a common data collection and reporting format in the area of artificial production, evaluate and monitor water quality, improve communications between agencies and provide annual evaluation of fish health information for production of healthier smolts. This completion report will contain a project evaluation, review of the goals of the project, evaluation of the specific fish health analyses, an overview of highlights of the project and concluding remarks. 8 refs., 1 fig., 4 tabs

  20. Endangered river fish: factors hindering conservation and restoration

    Science.gov (United States)

    Cooke, Steven J.; Paukert, Craig P.; Hogan, Zeb

    2012-01-01

    Globally, riverine fish face many anthropogenic threats including riparian and flood plain habitat degradation, altered hydrology, migration barriers, fisheries exploitation, environmental (climate) change, and introduction of invasive species. Collectively, these threats have made riverine fishes some of the most threatened taxa on the planet. Although much effort has been devoted to identifying the threats faced by river fish, there has been less effort devoted to identifying the factors that may hinder our ability to conserve and restore river fish populations and their watersheds. Therefore, we focus our efforts on identifying and discussing 10 general factors (can also be viewed as research and implementation needs) that constrain or hinder effective conservation action for endangered river fish: (1) limited basic natural history information; (2) limited appreciation for the scale/extent of migrations and the level of connectivity needed to sustain populations; (3) limited understanding of fish/river-flow relationships; (4) limited understanding of the seasonal aspects of river fish biology, particularly during winter and/or wet seasons; (5) challenges in predicting the response of river fish and river ecosystems to both environmental change and various restoration or management actions; (6) limited understanding of the ecosystem services provided by river fish; (7) the inherent difficulty in studying river fish; (8) limited understanding of the human dimension of river fish conservation and management; (9) limitations of single species approaches that often fail to address the broader-scale problems; and (10) limited effectiveness of governance structures that address endangered river fish populations and rivers that cross multiple jurisdictions. We suggest that these issues may need to be addressed to help protect, restore, or conserve river fish globally, particularly those that are endangered.

  1. Febrile seizures prior to sudden cardiac death

    DEFF Research Database (Denmark)

    Stampe, Niels Kjær; Glinge, Charlotte; Jabbari, Reza

    2018-01-01

    Aims: Febrile seizure (FS) is a common disorder affecting 2-5% of children up to 5 years of age. The aim of this study was to determine whether FS in early childhood are over-represented in young adults dying from sudden cardiac death (SCD). Methods and results: We included all deaths (n = 4595...... with FS was sudden arrhythmic death syndrome (5/8; 62.5%). Conclusion: In conclusion, this study demonstrates a significantly two-fold increase in the frequency of FS prior to death in young SCD cases compared with the two control groups, suggesting that FS could potentially contribute in a risk......) nationwide and through review of all death certificates, we identified 245 SCD in Danes aged 1-30 years in 2000-09. Through the usage of nationwide registries, we identified all persons admitted with first FS among SCD cases (14/245; 5.7%) and in the corresponding living Danish population (71 027/2 369 785...

  2. Fish innate immunity against intestinal helminths.

    Science.gov (United States)

    Dezfuli, B S; Bosi, G; DePasquale, J A; Manera, M; Giari, L

    2016-03-01

    Most individual fish in farmed and wild populations are infected with parasites. Upon dissection of fish, helminths from gut are often easily visible. Enteric helminths include several species of digeneans, cestodes, acanthocephalans and nematodes. Some insights into biology, morphology and histopathological effects of the main fish enteric helminths taxa will be described here. The immune system of fish, as that of other vertebrates, can be subdivided into specific and aspecific types, which in vivo act in concert with each other and indeed are interdependent in many ways. Beyond the small number of well-described models that exist, research focusing on innate immunity in fish against parasitic infections is lacking. Enteric helminths frequently cause inflammation of the digestive tract, resulting in a series of chemical and morphological changes in the affected tissues and inducing leukocyte migration to the site of infection. This review provides an overview on the aspecific defence mechanisms of fish intestine against helminths. Emphasis will be placed on the immune cellular response involving mast cells, neutrophils, macrophages, rodlet cells and mucous cells against enteric helminths. Given the relative importance of innate immunity in fish, and the magnitude of economic loss in aquaculture as a consequence of disease, this area deserves considerable attention and support. Copyright © 2016 Elsevier Ltd. All rights reserved.

  3. Eutropiichthys vacha (Hamilton, 1822), a threatened fish of Indian subcontinent

    OpenAIRE

    Sandipan Gupta; Samir Banerjee

    2016-01-01

    Eutropiichthys vacha (Batchwa vacha) is a freshwater catfish species having high economic value. It is a very popular table fish among the consumers due to high nutritional value and taste. Just recently small specimens of this species have also made their entry in ornamental fish markets. Recently due to number of reasons, populations of this fish species are facing the threat of extinction. It has already been documented as Endangered in India and Critically Endangered in Bangladesh. The pr...

  4. Larval traits carry over to affect post-settlement behaviour in a common coral reef fish.

    Science.gov (United States)

    Dingeldein, Andrea L; White, J Wilson

    2016-07-01

    Most reef fishes begin life as planktonic larvae before settling to the reef, metamorphosing and entering the benthic adult population. Different selective forces determine survival in the planktonic and benthic life stages, but traits established in the larval stage may carry over to affect post-settlement performance. We tested the hypothesis that larval traits affect two key post-settlement fish behaviours: social group-joining and foraging. Certain larval traits of reef fishes are permanently recorded in the rings in their otoliths. In the bluehead wrasse (Thalassoma bifasciatum), prior work has shown that key larval traits recorded in otoliths (growth rate, energetic condition at settlement) carry over to affect post-settlement survival on the reef, with higher-larval-condition fish experiencing less post-settlement mortality. We hypothesized that this selective mortality is mediated by carry-over effects on post-settlement antipredator behaviours. We predicted that better-condition fish would forage less and be more likely to join groups, both behaviours that would reduce predation risk. We collected 550 recently settled bluehead wrasse (Thalassoma bifasciatum) from three reef sites off St. Croix (USVI) and performed two analyses. First, we compared each settler's larval traits to the size of its social group to determine whether larval traits influenced group-joining behaviour. Secondly, we observed foraging behaviour in a subset of grouped and solitary fish (n = 14) for 1-4 days post-settlement. We then collected the fish and tested whether larval traits influenced the proportion of time spent foraging. Body length at settlement, but not condition, affected group-joining behaviour; smaller fish were more likely to remain solitary or in smaller groups. However, both greater length and better condition were associated with greater proportions of time spent foraging over four consecutive days post-settlement. Larval traits carry over to affect post

  5. North Slope, Alaska ESI: FISH (Fish Polygons)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — This data set contains sensitive biological resource data for marine, estuarine, anadromous, and freshwater fish species for the North Slope of Alaska. Vector...

  6. Columbia River ESI: FISH (Fish Polygons)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — This data set contains sensitive biological resource data for marine, estuarine, anadromous, and freshwater fish species in Columbia River. Vector polygons in this...

  7. Western Alaska ESI: FISH (Fish Polygons)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — This data set contains sensitive biological resource data for marine, estuarine, and anadromous fish species in Western Alaska. Vector polygons in this data set...

  8. Health effects of fish and fish oils

    National Research Council Canada - National Science Library

    Chandra, Ranjit Kumar

    1989-01-01

    .... Based on epidemiologic data, it has been suggested that a fish-containing diet is beneficial in the prevention and management of a variety of disorders including coronary heart disease, hypertension, and psoriasis...

  9. Southeast Alaska ESI: FISH (Fish Polygons)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — This data set contains biological resource data for estuarine, benthic, and pelagic fish in Southeast Alaska. Vector polygons in this data set represent locations of...

  10. Individual differences in cognition among teleost fishes.

    Science.gov (United States)

    Lucon-Xiccato, Tyrone; Bisazza, Angelo

    2017-08-01

    Individual differences in cognitive abilities have been thoroughly investigated in humans and to a lesser extent in other mammals. Despite the growing interest in studying cognition in other taxonomic groups, data on individual differences are scarce for non-mammalian species. Here, we review the literature on individual differences in cognitive abilities in teleost fishes. Relatively few studies have directly addressed this topic and have provided evidence of consistent and heritable individual variation in cognitive abilities in fish. We found much more evidence of individual cognitive differences in other research areas, namely sex differences, personality differences, cerebral lateralisation and comparison between populations. Altogether, these studies suggest that individual differences in cognition are as common in fish as in warm-blooded vertebrates. Based on the example of research on mammals, we suggest directions for future investigation in fish. Copyright © 2017 Elsevier B.V. All rights reserved.

  11. Acetylcholinesterase inhibition and gill lesions in Rasbora caverii, an indigenous fish inhabiting rice field associated waterbodies in Sri Lanka.

    Science.gov (United States)

    Wijeyaratne, W M D N; Pathiratne, Asoka

    2006-10-01

    The present study was aimed at applying condition factor (CF), brain acetylcholinesterase (AChE) and gill histology as biomarkers for detecting possible exposure/effect induced by pesticides in fish residing rice field associated waterbodies in Sri Lanka. Biomarkers of an indigenous fish, Rasbora caverii collected from five sampling sites including canals near rice fields, a river and a reservoir (the reference site) were evaluated at four sampling stages covering pesticide application periods during rice cultivation season in 2004. Results indicated that CF of the fish did not show significant alterations regardless of the sampling sites or sampling stages. Site specific differences in AChE activities of the fish were not evident either prior to application of pesticides or at 7 days after Paraquat application to the rice fields. Two days after the application of a mixture of Fenthion and Phenthoate to the rice fields, AChE activity of the fish collected from canals near rice fields was significantly depressed (65-75%) compared to the fish in the reference site. The activities remain depressed to 50-56% even at 65 days after the insecticides application. Laboratory studies showed that prior exposure of R. caverii to Paraquat (2 microg l(-1), 7 days) enhanced the extent of inhibition of brain AChE activity induced by Fenthion (3 microg l(-1)) or a mixture of Fenthion (3 microg l(-1)) and Phenthoate (5 microg l(-1)). Gills of fish collected from canals near rice fields exhibited abnormal multiple divisions at the tips of some secondary lamellae in addition to hyperplasia, hypertrophy and club shaped deformities. Results indicate that application of pesticides in rice culture could manifest a threat to native fish populations residing rice field associated waterbodies. The response of brain AChE and histological changes in the gills of R. caverii allowed differentiating sampling sites after insecticide applications to the rice fields. Hence, R. caverii may be

  12. Testing animal-assisted cleaning prior to transplantation in coral reef restoration.

    Science.gov (United States)

    Frias-Torres, Sarah; van de Geer, Casper

    2015-01-01

    Rearing coral fragments in nurseries and subsequent transplantation onto a degraded reef is a common approach for coral reef restoration. However, if barnacles and other biofouling organisms are not removed prior to transplantation, fish will dislodge newly cemented corals when feeding on biofouling organisms. This behavior can lead to an increase in diver time due to the need to reattach the corals. Thus, cleaning nurseries to remove biofouling organisms such as algae and invertebrates is necessary prior to transplantation, and this cleaning constitutes a significant time investment in a restoration project. We tested a novel biomimicry technique of animal-assisted cleaning on nursery corals prior to transplantation at a coral reef restoration site in Seychelles, Indian Ocean. To determine whether animal-assisted cleaning was possible, preliminary visual underwater surveys were performed to quantify the fish community at the study site. Then, cleaning stations consisting of nursery ropes carrying corals and biofouling organisms, set at 0.3 m, 2 m, 4 m, 6 m and 8 m from the seabed, were placed at both the transplantation (treatment) site and the nursery (control) site. Remote GoPro video cameras recorded fish feeding at the nursery ropes without human disturbance. A reef fish assemblage of 32 species from 4 trophic levels (18.8% herbivores, 18.8% omnivores, 59.3% secondary consumers and 3.1% carnivores) consumed 95% of the barnacles on the coral nursery ropes placed 0.3 m above the seabed. Using this cleaning station, we reduced coral dislodgement from 16% to zero. This cleaning station technique could be included as a step prior to coral transplantation worldwide on the basis of location-specific fish assemblages and during the early nursery phase of sexually produced juvenile corals.

  13. Testing animal-assisted cleaning prior to transplantation in coral reef restoration

    Directory of Open Access Journals (Sweden)

    Sarah Frias-Torres

    2015-09-01

    Full Text Available Rearing coral fragments in nurseries and subsequent transplantation onto a degraded reef is a common approach for coral reef restoration. However, if barnacles and other biofouling organisms are not removed prior to transplantation, fish will dislodge newly cemented corals when feeding on biofouling organisms. This behavior can lead to an increase in diver time due to the need to reattach the corals. Thus, cleaning nurseries to remove biofouling organisms such as algae and invertebrates is necessary prior to transplantation, and this cleaning constitutes a significant time investment in a restoration project. We tested a novel biomimicry technique of animal-assisted cleaning on nursery corals prior to transplantation at a coral reef restoration site in Seychelles, Indian Ocean. To determine whether animal-assisted cleaning was possible, preliminary visual underwater surveys were performed to quantify the fish community at the study site. Then, cleaning stations consisting of nursery ropes carrying corals and biofouling organisms, set at 0.3 m, 2 m, 4 m, 6 m and 8 m from the seabed, were placed at both the transplantation (treatment site and the nursery (control site. Remote GoPro video cameras recorded fish feeding at the nursery ropes without human disturbance. A reef fish assemblage of 32 species from 4 trophic levels (18.8% herbivores, 18.8% omnivores, 59.3% secondary consumers and 3.1% carnivores consumed 95% of the barnacles on the coral nursery ropes placed 0.3 m above the seabed. Using this cleaning station, we reduced coral dislodgement from 16% to zero. This cleaning station technique could be included as a step prior to coral transplantation worldwide on the basis of location-specific fish assemblages and during the early nursery phase of sexually produced juvenile corals.

  14. Testing animal-assisted cleaning prior to transplantation in coral reef restoration

    Science.gov (United States)

    van de Geer, Casper

    2015-01-01

    Rearing coral fragments in nurseries and subsequent transplantation onto a degraded reef is a common approach for coral reef restoration. However, if barnacles and other biofouling organisms are not removed prior to transplantation, fish will dislodge newly cemented corals when feeding on biofouling organisms. This behavior can lead to an increase in diver time due to the need to reattach the corals. Thus, cleaning nurseries to remove biofouling organisms such as algae and invertebrates is necessary prior to transplantation, and this cleaning constitutes a significant time investment in a restoration project. We tested a novel biomimicry technique of animal-assisted cleaning on nursery corals prior to transplantation at a coral reef restoration site in Seychelles, Indian Ocean. To determine whether animal-assisted cleaning was possible, preliminary visual underwater surveys were performed to quantify the fish community at the study site. Then, cleaning stations consisting of nursery ropes carrying corals and biofouling organisms, set at 0.3 m, 2 m, 4 m, 6 m and 8 m from the seabed, were placed at both the transplantation (treatment) site and the nursery (control) site. Remote GoPro video cameras recorded fish feeding at the nursery ropes without human disturbance. A reef fish assemblage of 32 species from 4 trophic levels (18.8% herbivores, 18.8% omnivores, 59.3% secondary consumers and 3.1% carnivores) consumed 95% of the barnacles on the coral nursery ropes placed 0.3 m above the seabed. Using this cleaning station, we reduced coral dislodgement from 16% to zero. This cleaning station technique could be included as a step prior to coral transplantation worldwide on the basis of location-specific fish assemblages and during the early nursery phase of sexually produced juvenile corals. PMID:26468440

  15. A Mixed-Method Approach for Quantifying Illegal Fishing and Its Impact on an Endangered Fish Species.

    Science.gov (United States)

    Free, Christopher M; Jensen, Olaf P; Mendsaikhan, Bud

    2015-01-01

    Illegal harvest is recognized as a widespread problem in natural resource management. The use of multiple methods for quantifying illegal harvest has been widely recommended yet infrequently applied. We used a mixed-method approach to evaluate the extent, character, and motivations of illegal gillnet fishing in Lake Hovsgol National Park, Mongolia and its impact on the lake's fish populations, especially that of the endangered endemic Hovsgol grayling (Thymallus nigrescens). Surveys for derelict fishing gear indicate that gillnet fishing is widespread and increasing and that fishers generally use 3-4 cm mesh gillnet. Interviews with resident herders and park rangers suggest that many residents fish for subsistence during the spring grayling spawning migration and that some residents fish commercially year-round. Interviewed herders and rangers generally agree that fish population sizes are decreasing but are divided on the causes and solutions. Biological monitoring indicates that the gillnet mesh sizes used by fishers efficiently target Hovsgol grayling. Of the five species sampled in the monitoring program, only burbot (Lota lota) showed a significant decrease in population abundance from 2009-2013. However, grayling, burbot, and roach (Rutilus rutilus) all showed significant declines in average body size, suggesting a negative fishing impact. Data-poor stock assessment methods suggest that the fishing effort equivalent to each resident family fishing 50-m of gillnet 11-15 nights per year would be sufficient to overexploit the grayling population. Results from the derelict fishing gear survey and interviews suggest that this level of effort is not implausible. Overall, we demonstrate the ability for a mixed-method approach to effectively describe an illegal fishery and suggest that these methods be used to assess illegal fishing and its impacts in other protected areas.

  16. Fish elevator and method of elevating fish

    Energy Technology Data Exchange (ETDEWEB)

    Truebe, J.; Drooker, M.S.

    1984-02-14

    A means and method are disclosed for transporting fish from a lower body of water to a higher body of water. The means comprise a tubular lock with a gated entrance below the level of the lower body of water through which fish may enter the lock and a discharge passage above the level of the upper body of water. The fish raising means in the lock is a crowder pulled upward by a surface float as water from the upper body of water gravitationally flows into the closed lock filling it to the level of the upper body. Water is then pumped into the lock to raise the level to the discharge passage. The crowder is then caused to float upward the remaining distance through the water to the level of the discharge passage by the introduction of air into a pocket on the underside of the crowder. The fish are then automatically discharged from the lock into the discharge passage by the out of water position of the crowder. The movement of the fish into the discharge passage is aided by the continuous overflow of water still being pumped into the lock. A pipe may be connected to the discharge passage to deliver the fish to a selected location in the upper body of water. 6 figs.

  17. Fish elevator and method of elevating fish

    Science.gov (United States)

    Truebe, Jonathan; Drooker, Michael S.

    1984-01-01

    A means and method for transporting fish from a lower body of water to a higher body of water. The means comprises a tubular lock with a gated entrance below the level of the lower body of water through which fish may enter the lock and a discharge passage above the level of the upper body of water. The fish raising means in the lock is a crowder pulled upward by a surface float as water from the upper body of water gravitationally flows into the closed lock filling it to the level of the upper body. Water is then pumped into the lock to raise the level to the discharge passage. The crowder is then caused to float upward the remaining distance through the water to the level of the discharge passage by the introduction of air into a pocket on the underside of the crowder. The fish are then automatically discharged from the lock into the discharge passage by the out of water position of the crowder. The movement of the fish into the discharge passage is aided by the continuous overflow of water still being pumped into the lock. A pipe may be connected to the discharge passage to deliver the fish to a selected location in the upper body of water.

  18. Forestry practices and aquatic biodiversity: Fish

    Science.gov (United States)

    Gresswell, Robert E.

    2005-01-01

    In the Pacific Northwest, fish communities are found in a diverse array of aquatic habitats ranging from the large coastal rivers of the temperate rainforests, to the fragmented and sometimes ephemeral streams of the xeric interior basins, and high-elevation streams and lakes in the mountainous areas (Rieman et al. 2003). Only high-elevation lakes and streams isolated above barriers to fish passage remained historically devoid of fish because they were never invaded following Pleistocene glaciation (Smith 1981). Despite this widespread distribution and once great population abundances, taxonomic diversity of fishes in these forested systems is naturally lower than in aquatic habitats in the eastern U.S. (Reeves, Bisson, and Dambacher 1998). Interactions among factors that influence species richness in aquatic systems (e.g., basin size, long-term stability of habitat, and barriers to colonization; Smith 1981) continue to influence the occurrence and persistence of fishes in these systems today. Consequently, the larger low-elevation rivers and estuaries support the greatest variety of fish species. In the high-elevation tributary streams, fish communities are less complex because these aquatic systems were less climatically and geologically stable, and fish populations were smaller and more prone to local extirpation. Furthermore, barriers to fish passage inhibited dispersal and colonization (Smith 1981). Streams in forested landscapes generally support salmon and trout, Oncorhynchus spp., whitefish Prosopium spp., sculpins Cottus spp., suckers Catostomus spp., and minnows (Cyprinidae), but in some of the colder streams, chars (e.g., Salvelinus confluentus and Salvelinus malma) and lampreys (Petromyzontidae)may also occur (Rieman et al. 2003).Although biodiversity defined in terms of fish species richness is low in the Pacific Northwest, intraspecific variability is high, and polytypic fish species are common in the diverse aquatic habitats of the region. For

  19. Characteristics of Marine Recreational Fishing in the anakkale Strait (Turkey

    Directory of Open Access Journals (Sweden)

    V. UNAL

    2010-11-01

    Full Text Available The economic and harvest impacts of Marine Recreational Fishing (MRF in Çanakkale Strait were analysed along with fishing policy, sociology and habits of fishers. Data sources included field survey data carried out along the entire length of the Çanakkale strait and policy information gathered from published sources. MRF policy is commendable, even in the fishing tourism sector, and is better developed than that in many other European countries. In Çanakkale, 9.9% of the population is recreational fishers. Recreational fishers are typically men (90%, primarily those between the ages of 25 and 49 yrs. The occupation of the recreational fishers ranged from self-employed (28%, students (28%, retired persons (22% and public employees (15%, to currently-unemployed persons (7%. An analysis of diel behaviour showed that most recreational fishers preferred fishing during the day (56.1%, while the evening was the next most preferred time for fishing (18%, followed by the night-time (9.8%, while a substantial number of recreational fishers (16.1% reported that they fished at any time of day. The most popular type of fishing was shore-based (68%, followed by boat-based (21%, and underwater fishing (11%. The mean daily fishing times were 6.07 h d-1, 6.18 h d-1 4.75 d-1 for boat-based, underwater and shore-based fishing, respectively. Summer and autumn were the preferred seasons for shore-based and underwater fishing, while autumn and winter were preferred for boat-based fishing. The highest Catch per Unit Effort (CPUE was observed for boat-based fishing (2.77 kg h-1, followed by underwater (0.97 kg h-1 and shore-based fishing (0.81 kg h-1. The catch composition included 51 species, though the catch composition of each fishing type was mostly comprised of only 3 or 4 species. The impact of the MRF harvest was high (30% of commercial fishing, particularly for bluefish (Pomatomus saltatrix and picarel (Spicara smaris species. The economic impact of MRF was

  20. Challenges of transferring models of fish abundance between coral reefs.

    Science.gov (United States)

    Sequeira, Ana M M; Mellin, Camille; Lozano-Montes, Hector M; Meeuwig, Jessica J; Vanderklift, Mathew A; Haywood, Michael D E; Babcock, Russell C; Caley, M Julian

    2018-01-01

    Reliable abundance estimates for species are fundamental in ecology, fisheries, and conservation. Consequently, predictive models able to provide reliable estimates for un- or poorly-surveyed locations would prove a valuable tool for management. Based on commonly used environmental and physical predictors, we developed predictive models of total fish abundance and of abundance by fish family for ten representative taxonomic families for the Great Barrier Reef (GBR) using multiple temporal scenarios. We then tested if models developed for the GBR (reference system) could predict fish abundances at Ningaloo Reef (NR; target system), i.e., if these GBR models could be successfully transferred to NR. Models of abundance by fish family resulted in improved performance (e.g., 44.1% fish abundance (9% fish species richness from the GBR to NR, transferability for these fish abundance models was poor. When compared with observations of fish abundance collected in NR, our transferability results had low validation scores ( R 2   0.05). High spatio-temporal variability of patterns in fish abundance at the family and population levels in both reef systems likely affected the transferability of these models. Inclusion of additional predictors with potential direct effects on abundance, such as local fishing effort or topographic complexity, may improve transferability of fish abundance models. However, observations of these local-scale predictors are often not available, and might thereby hinder studies on model transferability and its usefulness for conservation planning and management.