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Sample records for extinction coefficient profile

  1. Retrieval method of aerosol extinction coefficient profile by an integral lidar system and case study

    Science.gov (United States)

    Shan, Huihui; Zhang, Hui; Liu, Junjian; Wang, Shenhao; Ma, Xiaomin; Zhang, Lianqing; Liu, Dong; Xie, Chenbo; Tao, Zongming

    2018-02-01

    Aerosol extinction coefficient profile is an essential parameter for atmospheric radiation model. But it is difficult to get the full aerosol extinction profile from the ground to the tropopause especially in near ground precisely using backscattering lidar. A combined measurement of side-scattering, backscattering and Raman-scattering lidar is proposed to retrieve the aerosol extinction coefficient profile from the surface to the tropopause which covered a dynamic range of 5 orders. The side-scattering technique solves the dead zone and the overlap problem caused by the traditional lidar in the near range. Using the Raman-scattering the aerosol lidar ratio (extinction to backscatter ratio) can be obtained. The cases studies in this paper show the proposed method is reasonable and feasible.

  2. Determination of the particulate extinction-coefficient profile and the column-integrated lidar ratios using the backscatter-coefficient and optical-depth profiles

    Science.gov (United States)

    Vladimir A Kovalev; Wei Min Hao; Cyle Wold

    2007-01-01

    A new method is considered that can be used for inverting data obtained from a combined elastic-inelastic lidar or a high spectral resolution lidar operating in a one-directional mode, or an elastic lidar operating in a multiangle mode. The particulate extinction coefficient is retrieved from the simultaneously measured profiles of the particulate backscatter...

  3. Retrieval method of aerosol extinction coefficient profile based on backscattering, side-scattering and Raman-scattering lidar

    Science.gov (United States)

    Shan, Huihui; Zhang, Hui; Liu, Junjian; Tao, Zongming; Wang, Shenhao; Ma, Xiaomin; Zhou, Pucheng; Yao, Ling; Liu, Dong; Xie, Chenbo; Wang, Yingjian

    2018-03-01

    Aerosol extinction coefficient profile is an essential parameter for atmospheric radiation model. It is difficult to get higher signal to noise ratio (SNR) of backscattering lidar from the ground to the tropopause especially in near range. Higher SNR problem can be solved by combining side-scattering and backscattering lidar. Using Raman-scattering lidar, aerosol extinction to backscatter ratio (lidar ratio) can be got. Based on side-scattering, backscattering and Raman-scattering lidar system, aerosol extinction coefficient is retrieved precisely from the earth's surface to the tropopause. Case studies show this method is reasonable and feasible.

  4. Extinction Coefficient of Gold Nanostars

    OpenAIRE

    de Puig, Helena; Tam, Justina O.; Yen, Chun-Wan; Gehrke, Lee; Hamad-Schifferli, Kimberly

    2015-01-01

    Gold nanostars (NStars) are highly attractive for biological applications due to their surface chemistry, facile synthesis and optical properties. Here, we synthesize NStars in HEPES buffer at different HEPES/Au ratios, producing NStars of different sizes and shapes, and therefore varying optical properties. We measure the extinction coefficient of the synthesized NStars at their maximum surface plasmon resonances (SPR), which range from 5.7 × 108 to 26.8 × 108 M−1cm−1. Measured values correl...

  5. Extinction Coefficient of Gold Nanostars.

    Science.gov (United States)

    de Puig, Helena; Tam, Justina O; Yen, Chun-Wan; Gehrke, Lee; Hamad-Schifferli, Kimberly

    2015-07-30

    Gold nanostars (NStars) are highly attractive for biological applications due to their surface chemistry, facile synthesis and optical properties. Here, we synthesize NStars in HEPES buffer at different HEPES/Au ratios, producing NStars of different sizes and shapes, and therefore varying optical properties. We measure the extinction coefficient of the synthesized NStars at their maximum surface plasmon resonances (SPR), which range from 5.7 × 10 8 to 26.8 × 10 8 M -1 cm -1 . Measured values correlate with those obtained from theoretical models of the NStars using the discrete dipole approximation (DDA), which we use to simulate the extinction spectra of the nanostars. Finally, because NStars are typically used in biological applications, we conjugate DNA and antibodies to the NStars and calculate the footprint of the bound biomolecules.

  6. Molar extinction coefficients of some fatty acids

    DEFF Research Database (Denmark)

    Sandhu, G.K.; Singh, K.; Lark, B.S.

    2002-01-01

    ) and stearic acid (C18H36O2), has been measured at the photon energies 81, 356, 511, 662, 1173 and 1332 keV. Experimental values for the molar extinction coefficient, the effective atomic number and the electron density have been derived and compared with theoretical calculations. There is good agreement......The attenuation of gamma rays in some fatty acids, viz. formic acid (CH2O2), acetic acid (C2H4O2), propionic acid (C3H6O2), butyric acid (C4H8O2), n-hexanoic acid (C6H12O2), n-caprylic acid (C8H16O2), lauric acid (C12H24O2), myristic acid (C14H28O2), palmitic acid (C16H32O2), oleic acid (C18H34O2...

  7. Theoretical investigation of the extinction coefficient of magnetic fluid

    Energy Technology Data Exchange (ETDEWEB)

    Fang Xiaopeng; Xuan Yimin, E-mail: ymxuan@mail.njust.edu.cn; Li Qiang [Nanjing University of Science and Technology, School of Energy and Power Engineering (China)

    2013-05-15

    A new theoretical approach for calculating the extinction coefficient of magnetic fluid is proposed, which is based on molecular dynamics (MD) simulation and T-matrix method. By means of this approach, the influence of particle diameter, particle volume fraction, and external magnetic filed on the extinction coefficient of magnetic fluid is investigated. The results show that the extinction coefficient of the magnetic fluid linearly increases with increase in the particle volume fraction. For a given particle volume fraction, the extinction coefficient increases with increase in the particle diameter which varies from 5 to 20 nm. When a uniform external magnetic filed is applied to the magnetic fluid, the extinction coefficient of the magnetic fluid presents an anisotropic feature. These results agree well with the reported experimental results. The proposed approach is applicable to investigating the optical properties of magnetic fluids.

  8. Experimental Determination of Infrared Extinction Coefficients of Interplanetary Dust Particles

    Science.gov (United States)

    Spann, J. F., Jr.; Abbas, M. M.

    1998-01-01

    This technique is based on irradiating a single isolated charged dust particle suspended in balance by an electric field, and measuring the scattered radiation as a function of angle. The observed scattered intensity profile at a specific wavelength obtained for a dust particle of known composition is compared with Mie theory calculations, and the variable parameters relating to the particle size and complex refractive index are adjusted for a best fit between the two profiles. This leads to a simultaneous determination of the particle radius, the complex refractive index, and the scattering and extinction coefficients. The results of these experiments can be utilized to examine the IRAS and DIRBE (Diffuse Infrared Background Experiment) infrared data sets in order to determine the dust particle physical characteristics and distributions by using infrared models and inversion techniques. This technique may also be employed for investigation of the rotational bursting phenomena whereby large size cosmic and interplanetary particles are believed to fragment into smaller dust particles.

  9. Molar extinction coefficients of solutions of some organic compounds

    Indian Academy of Sciences (India)

    efficients of these compounds have been used to calculate effective atomic numbers and electron densities. The additivity ... Molar extinction coefficients; effective atomic numbers; electron density. PACS Nos 29.30. ... the radiation path and is linearly dependent on the concentration of the absorbing species. This is most ...

  10. Melanoidins extinction coefficient in the glucose/glycine Maillard reaction

    NARCIS (Netherlands)

    Martins, S.I.F.S.; Boekel, van M.A.J.S.

    2003-01-01

    Melanoidins (brown, nitrogenous polymers and co-polymers) are the final products of the Maillard reaction. The glucose/glycine melanoidins extinction coefficient was determined using C-14-labelled glucose at three different reaction conditions. The absorbance was measured at different wavelengths

  11. Molar extinction coefficients of solutions of some organic compounds

    Indian Academy of Sciences (India)

    (C4H8O2), succinimide (C4H5NO2) as estimated from the measured absorbance of. 7 radiations in their ... species in the solution and ε is called the molar absorptivity or extinction coefficient. (l mol-1cm-1 or ... Integration of eq. (4) leads to.

  12. Molar extinction coefficients of some carbohydrates in aqueous ...

    Indian Academy of Sciences (India)

    of plants and animals, both as structural elements and in the maintenance of functional ... In this paper we report the molar extinction coefficient ε, of carbohydrates ... as the area, which has to be hit by the photons in order to cause interaction.

  13. Simultaneous all-optical determination of molecular concentration and extinction coefficient.

    Science.gov (United States)

    Cho, Byungmoon; Tiwari, Vivek; Jonas, David M

    2013-06-04

    Absolute molecular number concentration and extinction coefficient are simultaneously determined from linear and nonlinear spectroscopic measurements. This method is based on measurements of absolute femtosecond pump-probe signals. Accounting for pulse propagation, we present a closed form expression for molecular number concentration in terms of absorbance, fluorescence, absolute pump-probe signal, and laser pulse parameters (pulse energy, spectrum, and spatial intensity profile); all quantities are measured optically. As in gravimetric and coulometric determinations of concentration, no standard samples are needed for calibration. The extinction coefficient can then be determined from the absorbance spectrum and the concentration. For fluorescein in basic methanol, the optically determined molar concentrations and extinction coefficients match gravimetric determinations to within 10% for concentrations from 0.032 to 0.540 mM, corresponding to absorbance from 0.06 to 1. In principle, this photonumeric method is extensible to transient chemical species for which other methods are not available.

  14. The empirical Gaia G-band extinction coefficient

    Science.gov (United States)

    Danielski, C.; Babusiaux, C.; Ruiz-Dern, L.; Sartoretti, P.; Arenou, F.

    2018-06-01

    Context. The first Gaia data release unlocked the access to photometric information for 1.1 billion sources in the G-band. Yet, given the high level of degeneracy between extinction and spectral energy distribution for large passbands such as the Gaia G-band, a correction for the interstellar reddening is needed in order to exploit Gaia data. Aims: The purpose of this manuscript is to provide the empirical estimation of the Gaia G-band extinction coefficient kG for both the red giants and main sequence stars in order to be able to exploit the first data release DR1. Methods: We selected two samples of single stars: one for the red giants and one for the main sequence. Both samples are the result of a cross-match between Gaia DR1 and 2MASS catalogues; they consist of high-quality photometry in the G-, J- and KS-bands. These samples were complemented by temperature and metallicity information retrieved from APOGEE DR13 and LAMOST DR2 surveys, respectively. We implemented a Markov chain Monte Carlo method where we used (G - KS)0 versus Teff and (J - KS)0 versus (G - KS)0, calibration relations to estimate the extinction coefficient kG and we quantify its corresponding confidence interval via bootstrap resampling. We tested our method on samples of red giants and main sequence stars, finding consistent solutions. Results: We present here the determination of the Gaia extinction coefficient through a completely empirical method. Furthermore we provide the scientific community with a formula for measuring the extinction coefficient as a function of stellar effective temperature, the intrinsic colour (G - KS)0, and absorption.

  15. Turbid Media Extinction Coefficient for Near-Infrared Laser Radiation

    International Nuclear Information System (INIS)

    Dreischuh, T; Gurdev, L; Vankov, O; Stoyanov, D; Avramov, L

    2015-01-01

    In this work, extended investigations are performed of the extinction coefficient of Intralipid-20% dilutions in distilled water depending on the Intralipid concentration, for laser radiation wavelengths in the red and near-infrared regions covering the so-called tissue optical window. The extinction is measured by using an approach we have developed recently based on the features of the spatial intensity distribution of laser-radiation beams propagating through semi-infinite turbid media. The measurements are conducted using separately two dilution- containing plexiglass boxes of different sizes and volumes, in order to prove the appropriateness of the assumption of semi-infinite turbid medium. The experimental results for the extinction are in agreement with our previous results and with empiric formulae found by other authors concerning the wavelength dependence of the scattering coefficient of Intralipid – 10% and Intralipid – 20%. They are also in agreement with known data of the water absorptance. It is estimated as well that the wavelengths around 1320 nm would be advantageous for deep harmless sensing and diagnostics of tissues

  16. Parameterization of the Extinction Coefficient in Ice and Mixed-Phase Arctic Clouds during the ISDAC Field Campaign

    Energy Technology Data Exchange (ETDEWEB)

    Korolev, A; Shashkov, A; Barker, H

    2012-03-06

    This report documents the history of attempts to directly measure cloud extinction, the current measurement device known as the Cloud Extinction Probe (CEP), specific problems with direct measurement of extinction coefficient, and the attempts made here to address these problems. Extinction coefficient is one of the fundamental microphysical parameters characterizing bulk properties of clouds. Knowledge of extinction coefficient is of crucial importance for radiative transfer calculations in weather prediction and climate models given that Earth's radiation budget (ERB) is modulated much by clouds. In order for a large-scale model to properly account for ERB and perturbations to it, it must ultimately be able to simulate cloud extinction coefficient well. In turn this requires adequate and simultaneous simulation of profiles of cloud water content and particle habit and size. Similarly, remote inference of cloud properties requires assumptions to be made about cloud phase and associated single-scattering properties, of which extinction coefficient is crucial. Hence, extinction coefficient plays an important role in both application and validation of methods for remote inference of cloud properties from data obtained from both satellite and surface sensors (e.g., Barker et al. 2008). While estimation of extinction coefficient within large-scale models is relatively straightforward for pure water droplets, thanks to Mie theory, mixed-phase and ice clouds still present problems. This is because of the myriad forms and sizes that crystals can achieve, each having their own unique extinction properties. For the foreseeable future, large-scale models will have to be content with diagnostic parametrization of crystal size and type. However, before they are able to provide satisfactory values needed for calculation of radiative transfer, they require the intermediate step of assigning single-scattering properties to particles. The most basic of these is extinction

  17. Molar extinction coefficients of some commonly used solvents

    International Nuclear Information System (INIS)

    Kumar, Ashok; Singh, Sukhpal; Singh Mudahar, Gurmel; Singh Thind, Kulwant

    2006-01-01

    Molar extinction coefficients of some commonly used solvents (ethanol (C 2 H 5 OH), methanol (CH 3 OH), propanol (C 3 H 7 OH), butanol (C 4 H 9 OH), water (H 2 O), toluene (C 7 H 8 ), benzene (C 6 H 6 ), carbontetrachloride (CCl 4 ), acetonitrile (C 4 H 3 N), chlorobenzene (C 6 H 5 Cl), diethylether (C 4 H 1 O) and dioxane (C 4 H 8 O 2 )) have been determined by a well-collimated narrow beam transmission geometry at 279, 356, 662, 1173, 1252 and 1332 keV γ rays. The total γ ray interaction cross sections of these solvents have also been determined. A good agreement has been obtained between the experimental results with the theoretical values evaluated through XCOM calculations

  18. HIRDLS/Aura Level 3 Extinction at 12.1 Microns Zonal Fourier Coefficients V007

    Data.gov (United States)

    National Aeronautics and Space Administration — The "HIRDLS/Aura Level 3 Extinction at 12.1 Microns Zonal Fourier Coefficients" version 7 data product (H3ZFC12MEXT) contains the entire mission (~3 years) of HIRDLS...

  19. Far infrared extinction coefficients of minerals of interest for astronomical observations

    International Nuclear Information System (INIS)

    Hasegawa, H.

    1984-01-01

    Far infrared extinction coefficients of mineral grains of interest for astronomical observations have been measured. The measured mineral species are: amorphous carbon, high temperature magnesium silicates, hydrous silicates, iron oxides, and amorphous silicates. (author)

  20. The Influence of Aerosol Hygroscopicity on Retrieving the Aerosol Extincting Coefficient from MPL Data

    Science.gov (United States)

    Zhao, G.; Zhao, C.

    2016-12-01

    Micro-pulse Lidar (MPL) measurements have been widely used to profile the ambient aerosol extincting coefficient(). Lidar Ratio (LR) ,which highly depends on the particle number size distribution (PNSD) and aerosol hygroscopicity, is the most important factor to retrieve the profile. A constant AOD constrained LR is usually used in current algorithms, which would lead to large bias when the relative humidity (RH) in the mixed layer is high. In this research, the influences of PNSD, aerosol hygroscopicity and RH profiles on the vertical variation of LR were investigated based on the datasets from field measurements in the North China Plain (NCP). Results show that LR can have an enhancement factor of more than 120% when the RH reaches to 92%. A new algorithm of retrieving the profile is proposed based on the variation of LR due to aerosol hygroscopicity. The magnitude and vertical structures of retrieved using this method can be significantly different to that of the fiexed LR method. The relative difference can reach up to 40% when the RH in the mixed layer is higher than 90% . Sensitivity studies show that RH profile and PNSD affect most on the retrieved by fiexed LR method. In view of this, a scheme of LR enhancement factor by RH is proposed in the NCP. The relative differnce of the calculated between using this scheme and the new algorithm with the variable LR can be less than 10%.

  1. An Improved Method of Predicting Extinction Coefficients for the Determination of Protein Concentration.

    Science.gov (United States)

    Hilario, Eric C; Stern, Alan; Wang, Charlie H; Vargas, Yenny W; Morgan, Charles J; Swartz, Trevor E; Patapoff, Thomas W

    2017-01-01

    Concentration determination is an important method of protein characterization required in the development of protein therapeutics. There are many known methods for determining the concentration of a protein solution, but the easiest to implement in a manufacturing setting is absorption spectroscopy in the ultraviolet region. For typical proteins composed of the standard amino acids, absorption at wavelengths near 280 nm is due to the three amino acid chromophores tryptophan, tyrosine, and phenylalanine in addition to a contribution from disulfide bonds. According to the Beer-Lambert law, absorbance is proportional to concentration and path length, with the proportionality constant being the extinction coefficient. Typically the extinction coefficient of proteins is experimentally determined by measuring a solution absorbance then experimentally determining the concentration, a measurement with some inherent variability depending on the method used. In this study, extinction coefficients were calculated based on the measured absorbance of model compounds of the four amino acid chromophores. These calculated values for an unfolded protein were then compared with an experimental concentration determination based on enzymatic digestion of proteins. The experimentally determined extinction coefficient for the native proteins was consistently found to be 1.05 times the calculated value for the unfolded proteins for a wide range of proteins with good accuracy and precision under well-controlled experimental conditions. The value of 1.05 times the calculated value was termed the predicted extinction coefficient. Statistical analysis shows that the differences between predicted and experimentally determined coefficients are scattered randomly, indicating no systematic bias between the values among the proteins measured. The predicted extinction coefficient was found to be accurate and not subject to the inherent variability of experimental methods. We propose the use of a

  2. Small-scale Scheimpflug lidar for aerosol extinction coefficient and vertical atmospheric transmittance detection.

    Science.gov (United States)

    Sun, Guodong; Qin, Laian; Hou, Zaihong; Jing, Xu; He, Feng; Tan, Fengfu; Zhang, Silong

    2018-03-19

    In this paper, a new prototypical Scheimpflug lidar capable of detecting the aerosol extinction coefficient and vertical atmospheric transmittance at 1 km above the ground is described. The lidar system operates at 532 nm and can be used to detect aerosol extinction coefficients throughout an entire day. Then, the vertical atmospheric transmittance can be determined from the extinction coefficients with the equation of numerical integration in this area. CCD flat fielding of the image data is used to mitigate the effects of pixel sensitivity variation. An efficient method of two-dimensional wavelet transform according to a local threshold value has been proposed to reduce the Gaussian white noise in the lidar signal. Furthermore, a new iteration method of backscattering ratio based on genetic algorithm is presented to calculate the aerosol extinction coefficient and vertical atmospheric transmittance. Some simulations are performed to reduce the different levels of noise in the simulated signal in order to test the precision of the de-noising method and inversion algorithm. The simulation result shows that the root-mean-square errors of extinction coefficients are all less than 0.02 km -1 , and that the relative errors of the atmospheric transmittance between the model and inversion data are below 0.56% for all cases. The feasibility of the instrument and the inversion algorithm have also been verified by an optical experiment. The average relative errors of aerosol extinction coefficients between the Scheimpflug lidar and the conventional backscattering elastic lidar are 3.54% and 2.79% in the full overlap heights of two time points, respectively. This work opens up new possibilities of using a small-scale Scheimpflug lidar system for the remote sensing of atmospheric aerosols.

  3. Three-dimensional measurement of the local extinction coefficient in a dense spray

    International Nuclear Information System (INIS)

    Wellander, Rikard; Berrocal, Edouard; Kristensson, Elias; Richter, Mattias; Aldén, Marcus

    2011-01-01

    Laser extinction, signal attenuation and multiple scattering are the three main phenomena limiting qualitative and quantitative measurements in planar laser imaging of sprays. In this paper, a method is presented where structured laser illumination planar imaging is used to remove the signal contribution from multiply scattered light. Based on this technique, data from side scattering and transmission measurements are obtained simultaneously. An algorithm, compensating for signal attenuation and laser extinction, is further applied to calculate the local extinction coefficient. The method is first demonstrated on a cuvette containing a homogeneous solution of scattering particles with an extinction coefficient μ-bar e = 0.13 mm −1 . Finally the procedure is applied on an air-assisted water spray with a maximum optical depth of OD ∼ 3, where the position-dependent extinction coefficient is extracted within the probed volume. To the best of our knowledge, this paper demonstrates for the first time a method to measure the local μ-bar e within the three dimensions of an inhomogeneous scattering medium using laser sheet illumination, after suppression of the multiple light scattering intensity

  4. Measurements of stratospheric Pinatubo aerosol extinction profiles by a Raman lidar

    International Nuclear Information System (INIS)

    Abo, Makoto; Nagasawa, Chikao.

    1992-01-01

    The Raman lidar has been used for remote measurements of water vapor, ozone and atmospheric temperature in the lower troposphere because the Raman cross section is three orders smaller than the Rayleigh cross section. The authors estimated the extinction coefficients of the Pinatubo volcanic aerosol in the stratosphere using a Raman lidar. If the precise aerosol extinction coefficients are derived, the backscatter coefficient of a Mie scattering lidar will be more accurately estimated. The Raman lidar has performed to measure density profiles of some species using Raman scattering. Here the authors used a frequency-doubled Nd:YAG laser for transmitter and received nitrogen vibrational Q-branch Raman scattering signal. Ansmann et al. (1990) derived tropospherical aerosol extinction profiles with a Raman lidar. The authors think that this method can apply to dense stratospheric aerosols such as Pinatubo volcanic aerosols. As dense aerosols are now accumulated in the stratosphere by Pinatubo volcanic eruption, the error of Ramen lidar signal regarding the fluctuation of air density can be ignored

  5. Atmospheric extinction coefficients and night sky brightness at the Xuyi Observation Station

    International Nuclear Information System (INIS)

    Zhang Hui-Hua; Liu Xiao-Wei; Zhang Hua-Wei; Xiang Mao-Sheng; Yuan Hai-Bo; Zhao Hai-Bin; Yao Jin-Sheng

    2013-01-01

    We present measurements of the optical broadband atmospheric extinction coefficients and the night sky brightness at the Xuyi Observation Station of Purple Mountain Observatory. The measurements are based on CCD imaging data taken in the Sloan Digital Sky Survey's g, r and i bands with the Xuyi 1.04/1.20 m Schmidt Telescope for the Xuyi Schmidt Telescope Photometric Survey of the Galactic Anti-center (XSTPS-GAC), the photometric part of the Digital Sky Survey of the Galactic Anti-center (DSS-GAC). The data were collected during more than 140 winter nights from 2009 to 2011. We find that the atmospheric extinction coefficients for the g, r and i bands are 0.69, 0.55 and 0.38 mag/airmass, respectively, based on observations taken on several photometric nights. The night sky brightness determined from images with good quality has median values of 21.7, 20.8 and 20.0 mag arcsec −2 and reaches 22.1, 21.2 and 20.4 mag arcsec −2 under the best observing conditions for the g, r and i bands, respectively. The relatively large extinction coefficients compared with other good astronomical observing sites are mainly due to the relatively low elevation (i.e. 180 m) and high humidity at the station.

  6. Precise determination of protein extinction coefficients under native and denaturing conditions using SV-AUC.

    Science.gov (United States)

    Hoffmann, Andreas; Grassl, Kerstin; Gommert, Janine; Schlesak, Christian; Bepperling, Alexander

    2018-04-17

    The accurate determination of protein concentration is an important though non-trivial task during the development of a biopharmaceutical. The fundamental prerequisite for this is the availability of an accurate extinction coefficient. Common approaches for the determination of an extinction coefficient for a given protein are either based on the theoretical prediction utilizing the amino acid sequence or the photometric determination combined with a measurement of absolute protein concentration. Here, we report on an improved SV-AUC based method utilizing an analytical ultracentrifuge equipped with absorbance and Rayleigh interference optics. Global fitting of datasets helped to overcome some of the obstacles encountered with the traditional method employing synthetic boundary cells. Careful calculation of dn/dc values taking glycosylation and solvent composition into account allowed the determination of the extinction coefficients of monoclonal antibodies and an Fc-fusion protein under native as well as under denaturing conditions. An intra-assay precision of 0.9% and an accuracy of 1.8% compared to the theoretical value was achieved for monoclonal antibodies. Due to the large number of data points of a single dataset, no meaningful difference between the ProteomeLab XL-I and the new Optima AUC platform could be observed. Thus, the AUC-based approach offers a precise, convenient and versatile alternative to conventional methods like total amino acid analysis (AAA).

  7. Determination of extinction coefficients of human hemoglobin in various redox states.

    Science.gov (United States)

    Meng, Fantao; Alayash, Abdu I

    2017-03-15

    The role of hemoglobin (Hb) redox forms in tissue and organ toxicities remain ambiguous despite the well-documented contribution of Hb redox reactivity to cellular and subcellular oxidative changes. Moreover, several recent studies, in which Hb toxicity were investigated, have shown conflicting outcomes. Uncertainties over the potential role of these species may in part be due to the protein preparation method of choice, the use of published extinction coefficients and the lack of suitable controls for Hb oxidation and heme loss. Highly purified and well characterized redox forms of human Hb were used in this study and the extinction coefficients of each Hb species (ferrous/oxy, ferric/met and ferryl) were determined. A new set of equations were established to improve accuracy in determining the transient ferryl Hb species. Additionally, heme concentrations in solutions and in human plasma were determined using a novel reversed phase HPLC method in conjugation with our photometric measurements. The use of more accurate redox-specific extinction coefficients and method calculations will be an invaluable tool for both in vitro and in vivo experiments aimed at determining the role of Hb-mediated vascular pathology in hemolytic anemias and when Hb is used as oxygen therapeutics. Published by Elsevier Inc.

  8. Determination of the molar extinction coefficient for the ferric reducing/antioxidant power assay.

    Science.gov (United States)

    Hayes, William A; Mills, Daniel S; Neville, Rachel F; Kiddie, Jenna; Collins, Lisa M

    2011-09-15

    The FRAP reagent contains 2,4,6-tris(2-pyridyl)-s-triazine, which forms a blue-violet complex ion in the presence of ferrous ions. Although the FRAP (ferric reducing/antioxidant power) assay is popular and has been in use for many years, the correct molar extinction coefficient of this complex ion under FRAP assay conditions has never been published, casting doubt on the validity of previous calibrations. A previously reported value of 19,800 is an underestimate. We determined that the molar extinction coefficient was 21,140. The value of the molar extinction coefficient was also shown to depend on the type of assay and was found to be 22,230 under iron assay conditions, in good agreement with published data. Redox titration indicated that the ferrous sulfate heptahydrate calibrator recommended by Benzie and Strain, the FRAP assay inventors, is prone to efflorescence and, therefore, is unreliable. Ferrous ammonium sulfate hexahydrate in dilute sulfuric acid was a more stable alternative. Few authors publish their calibration data, and this makes comparative analyses impossible. A critical examination of the limited number of examples of calibration data in the published literature reveals only that Benzie and Strain obtained a satisfactory calibration using their method. Copyright © 2011 Elsevier Inc. All rights reserved.

  9. Evaluating Nighttime CALIOP 0.532 micron Aerosol Optical Depth and Extinction Coefficient Retrievals

    Science.gov (United States)

    Campbell, J. R.; Tackett, J. L.; Reid, J. S.; Zhang, J.; Curtis, C. A.; Hyer, E. J.; Sessions, W. R.; Westphal, D. L.; Prospero, J. M.; Welton, E. J.; hide

    2012-01-01

    NASA Cloud Aerosol Lidar with Orthogonal Polarization (CALIOP) Version 3.01 5-km nighttime 0.532 micron aerosol optical depth (AOD) datasets from 2007 are screened, averaged and evaluated at 1 deg X 1 deg resolution versus corresponding/co-incident 0.550 micron AOD derived using the US Navy Aerosol Analysis and Prediction System (NAAPS), featuring two-dimensional variational assimilation of quality-assured NASA Moderate Resolution Imaging Spectroradiometer (MODIS) and Multi-angle Imaging Spectroradiometer (MISR) AOD. In the absence of sunlight, since passive radiometric AOD retrievals rely overwhelmingly on scattered radiances, the model represents one of the few practical global estimates available from which to attempt such a validation. Daytime comparisons, though, provide useful context. Regional-mean CALIOP vertical profiles of night/day 0.532 micron extinction coefficient are compared with 0.523/0.532 micron ground-based lidar measurements to investigate representativeness and diurnal variability. In this analysis, mean nighttime CALIOP AOD are mostly lower than daytime (0.121 vs. 0.126 for all aggregated data points, and 0.099 vs. 0.102 when averaged globally per normalised 1 deg. X 1 deg. bin), though the relationship is reversed over land and coastal regions when the data are averaged per normalised bin (0.134/0.108 vs. 0140/0.112, respectively). Offsets assessed within single bins alone approach +/- 20 %. CALIOP AOD, both day and night, are higher than NAAPS over land (0.137 vs. 0.124) and equal over water (0.082 vs. 0.083) when averaged globally per normalised bin. However, for all data points inclusive, NAAPS exceeds CALIOP over land, coast and ocean, both day and night. Again, differences assessed within single bins approach 50% in extreme cases. Correlation between CALIOP and NAAPS AOD is comparable during both day and night. Higher correlation is found nearest the equator, both as a function of sample size and relative signal magnitudes inherent at

  10. Studying the extinction coefficient due to aerosol particles at different spectral bands in some regions at great Cairo

    International Nuclear Information System (INIS)

    Shaltout, M.A. Mosalam; Tadros, M.T.Y.; El-Metwally, M.

    2000-01-01

    Extinction coefficient due to aerosol has been estimated by Pyrheliometric and Gorgie type Actinometric measurements in the industrial, urban areas and compared with agricultural areas. The measurements distributed over one year from June 1992 to May 1993 were made under clear sky for five spectral bands. The results show two maxima in hot wet and spring months and minimum in winter months, but there is a fluctuation in urban area. Diurnal variations show maximum at noon especially in the industrial area. Level of extinction coefficient in the industrial and urban area is greater that that of the agricultural area, except for hot wet months is due to the increase of water vapor content in agricultural area. Spectral distribution of the extinction coefficient decreases monotonically with wavelength. Size of particles in industrial area is greater than in urban and agricultural areas. The temperature and water vapor content have important rules in increasing the extinction coefficient of aerosols. (Author)

  11. The determination of extinction coefficient of CuInS2, and ZnCuInS3 multinary nanocrystals.

    Science.gov (United States)

    Qin, Lei; Li, Dongze; Zhang, Zhuolei; Wang, Kefei; Ding, Hong; Xie, Renguo; Yang, Wensheng

    2012-10-21

    A pioneering work for determining the extinction coefficient of colloidal semiconductor nanocrystals (NCs) has been cited over 1500 times (W. Yu, W. Guo, X. G. Peng, Chem. Mater., 2003, 15, 2854-2860), indicating the importance of calculating NC concentration for further research and applications. In this study, the size-dependent nature of the molar extinction coefficient of "greener" CuInS(2) and ZnCuInS(3) NCs with emission covering the whole visible to near infrared (NIR) is presented. With the increase of NC size, the resulting quantitative values of the extinction coefficients of ternary CuInS(2) and quaternary ZnCuInS(3) NCs are found to follow a power function with exponents of 2.1 and 2.5, respectively. Obviously, a larger value of extinction coefficient is observed in quaternary NCs for the same size of particles. The difference of the extinction coefficient from both samples is clearly demonstrated due to incorporating ZnS with a much larger extinction coefficient into CuInS(2) NCs.

  12. Evaluation of the Extinction Coefficient, Radiation Absorption and Use Efficiency of Saffron (Crocus sativus L.

    Directory of Open Access Journals (Sweden)

    Seyyedeh Maliheh Mirhashemi

    2015-10-01

    Full Text Available Leaf area index, light extinction coefficient and radiation use efficiency are important eco-physiological characteristics for realization of crops growth, development and radiation absorption. In order to determine the leaf area index (LAI, light extinction coefficient (K and radiation use efficiency (RUE of saffron during the first and second growing seasons, four experiments were started in 2011 and ended in 2014, at the Research Farm of the Agriculture Faculty, the Ferdowsi University of Mashhad, Iran. Saffron corms with weights between 13 to15 g and density of 50 plant.m2 were cultivated in 2011 and 2012. In all experimental years during the growing season, crop sampling was taken for required measurements including the leaf area index and shoot dry weight of saffron once every 14 days. The results showed that by increasing the age of saffron from 1 year to two years, the maximum LAI of saffron increased from 0.33 to 1.81, and light extinction coefficient decreased from 1.20 to 0.54. The increasing trend of LAI was coincident with fraction of absorbed radiation for all four years of the experiment. In the first and the second growing seasons, the amount of fraction of absorbed radiation gradually increased with increasing LAI and at 1083 and 1034 GDD reached its maximum value, respectively. In saffron farms when the plant was one year old and two years old, the mean value of RUE was 0.68 and 1.73 g.MJ-1 PAR, respectively. These results indicate that by increasing the saffron age and LAI, the value of K decreases and consequently radiation absorption and use efficiency will‎ increase.

  13. Molar extinction coefficients and other properties of an improved reaction center preparation from Rhodopseudomonas viridis

    Energy Technology Data Exchange (ETDEWEB)

    Clayton, R.K.; Clayton, B.J.

    1978-01-01

    Reaction centers have been purified from chromatophores of Rhodopseudomonas viridis by treatment with lauryl dimethyl amine oxide followed by hydroxyapatite chromatography and precipitation with ammonium sulfate. The absorption spectrum at low temperature shows bands at 531 and 543 nm, assigned to two molecules of bacteriopheophytin b. The 600 nm band of bacteriochlorophyll b is resolved at low temperature into components at 601 and 606.5 nm. At room temperature the light-induced difference spectrum shows a negative band centered at 615 nm, where the absorption spectrum shows only a week shoulder adjacent to the 600 nm band. The fluorescence spectrum shows a band at 1000 nm and no fluorescence corresponding to the 830 nm absorption band. Two molecules of cytochrome 558 and three of cytochrome 552 accompany each reaction center. The differential extinction coefficient (reduced minus oxidized) of cytochrome 558 nm was estimated as 20 +- 2 mM/sup -1/.cm/sup -1/ through a coupled reaction with equine cytochrome c. The extinction coefficient of reaction centers at 960 nm was determined to be 123 +- 25 mM/sup -1/.cm/sup -1/ by measuring the light-induced bleaching of P-960 and the coupled oxidation of cytochrome 558. The corresponding extinction coefficient at 830 nm is 300 +- 65 mM/sup -1/.cm/sup -1/. The absorbance ratio ..cap alpha../sub 280nm/..cap alpha../sub 830nm/ in our preparations was 2.1, and there was 190 kg protein per mol of reaction centers. Sodium dodecyl sulfate-polyacrylamide gel electrophoresis showed three major components of apparent molecular weights 31,000, 37,000, and 41,000.

  14. Row spacing effects on light extinction coefficients of corn, sorghum, soybean, and sunflower

    International Nuclear Information System (INIS)

    Flénet, F.; Kiniry, J.R.; Board, J.E.; Westgate, M.E.; Reicosky, D.C.

    1996-01-01

    In many crop models, light intercepted by a canopy (IPAR) is calculated from a Beer's Law equation: IPAR = PAR x [1- exp(-k x LAI)], where k is the extinction coefficient, PAR the photosynthetically active radiation, and LAI the leaf area index. The first objective of this study was to investigate the effect of row spacing on k for corn (Zea mays L.), sorghum [Sorghum bicolor (L.) Moench], soybean [Glycine max (L.) Merr.], and sunflower (Helianthus annuus L.) to provide information for modeling. Data from literature and from an experiment conducted at Temple, TX, were evaluated. The second objective was to investigate effects of time of day and stage of crop development on k for different row spacings. Seeds of all four species were sown in rows 0.35, 0.66, or 1.00 m apart. Measurements of canopy light interception were taken near solar noon on two dates before anthesis. At anthesis, extinction coefficients were determined at 0845, 1015, and 1145 h (solar time). The extinction coefficient showed a linear decrease as row spacing increased. For each crop, the effect of row spacing on k was described by one linear regression for most data. Stage of crop development and stage of development x row spacing interaction did not significantly affect k during the period of measurements. The effect of time of day was significant for all four crops, and the time of day x row spacing interaction was significant for soybean and sunflower. Thus, modeling light interception for different row spacings should account for these effects

  15. The functional correlation between rainfall rate and extinction coefficient for frequencies from 3 to 10 GHz

    Science.gov (United States)

    Jameson, A. R.

    1990-01-01

    The relationship between the rainfall rate (R) obtained from radiometric brightness temperatures and the extinction coefficient (k sub e) is investigated by computing the values of k sub e over a wide range of rainfall rates, for frequencies from 3 to 25 GHz. The results show that the strength of the relation between the R and the k sub e values exhibits considerable variation for frequencies at this range. Practical suggestions are made concerning the selection of particular frequencies for rain measurements to minimize the error in R determinations.

  16. Research on bimodal particle extinction coefficient during Brownian coagulation and condensation for the entire particle size regime

    International Nuclear Information System (INIS)

    Tang Hong; Lin Jianzhong

    2011-01-01

    The extinction coefficient of atmospheric aerosol particles influences the earth’s radiation balance directly or indirectly, and it can be determined by the scattering and absorption characteristics of aerosol particles. The problem of estimating the change of extinction coefficient due to time evolution of bimodal particle size distribution is studied, and two improved methods for calculating the Brownian coagulation coefficient and the condensation growth rate are proposed, respectively. Through the improved method based on Otto kernel, the Brownian coagulation coefficient can be expressed simply in powers of particle volume for the entire particle size regime based on the fitted polynomials of the mean enhancement function. Meanwhile, the improved method based on Fuchs–Sutugin kernel is developed to obtain the condensation growth rate for the entire particle size regime. And then, the change of the overall extinction coefficient of bimodal distributions undergoing Brownian coagulation and condensation can be estimated comprehensively for the entire particle size regime. Simulation experiments indicate that the extinction coefficients obtained with the improved methods coincide fairly well with the true values, which provide a simple, reliable, and general method to estimate the change of extinction coefficient for the entire particle size regime during the bimodal particle dynamic processes.

  17. Effect of Nitrogen Fertilizer on Light Interception and Light Extinction Coefficient in Different Wheat Cultivars

    Directory of Open Access Journals (Sweden)

    F Samadiyan

    2016-07-01

    Full Text Available Introduction Wheat (Triticum aestivum is a cereal grain, originated from the levant region of the near east and Ethiopian highlands, currently cultivated worldwide. Light extinction coefficient K is a coefficient that represents the amount of light reduced by the plant. Light or radiation extinction coefficient is a concept that expresses the light penetration decrease into the canopy in the way the upper leaves of the canopy with less angles have lower amount of K in comparison with the horizontal leaves. Green et al., (2003 stated that nitrogen fertilizer increased light absorption by plant leaves; and affects the yield. The distribution patterns of nitrogen allocation in leaves are more exposed therefore photosynthesis rate per unit leaf area and canopy were optimized. Differences in canopy structure by the light extinction coefficient (k of the Act Lambert - Beer is described, along LAI differing due to different species and genotypes which are important factors in absorption and light use efficiency. This experiment was performed to evaluate the maximum light absorption and light extinction coefficient in different levels of nitrogen usage and wheat cultivars. Materials and Methods An experiment was conducted during 2011-2012 on a research farm of Islamic Azad University, Isfahan Branch, located in Khatoon Abad Village (northern latitude of 320 and 40´ and eastern longitude of 510 and 48´ with altitude of 1555 m above sea level. A split plot layout within randomized complete block design was used with three replications. Main plots were consisted in four levels of N fertilizer (0, 50, 100 and 150 kg ha-1 from an urea source in main plots and different cultivars of wheat included Pishtaz, Sepahan and SW-486 in sub plots. Planting was performed on 14 November 2011 and at a density of 400 plants per square meter. In order to strengthen the land and required elements for plant regarding soil test and treatments based on the test plan, the

  18. Comparison of ambient aerosol extinction coefficients obtained from in-situ, MAX-DOAS and LIDAR measurements at Cabauw

    Directory of Open Access Journals (Sweden)

    P. Zieger

    2011-03-01

    Full Text Available In the field, aerosol in-situ measurements are often performed under dry conditions (relative humidity RH<30–40%. Since ambient aerosol particles experience hygroscopic growth at enhanced RH, their microphysical and optical properties – especially the aerosol light scattering – are also strongly dependent on RH. The knowledge of this RH effect is of crucial importance for climate forcing calculations or for the comparison of remote sensing with in-situ measurements. Here, we will present results from a four-month campaign which took place in summer 2009 in Cabauw, The Netherlands. The aerosol scattering coefficient σsp(λ was measured dry and at various, predefined RH conditions between 20 and 95% with a humidified nephelometer. The scattering enhancement factor f(RH,λ is the key parameter to describe the effect of RH on σsp(λ and is defined as σsp(RH,λ measured at a certain RH divided by the dry σsp(dry,λ. The measurement of f(RH,λ together with the dry absorption measurement (assumed not to change with RH allows the determination of the actual extinction coefficient σep(RH,λ at ambient RH. In addition, a wide range of other aerosol properties were measured in parallel. The measurements were used to characterize the effects of RH on the aerosol optical properties. A closure study showed the consistency of the aerosol in-situ measurements. Due to the large variability of air mass origin (and thus aerosol composition a simple parameterization of f(RH,λ could not be established. If f(RH,λ needs to be predicted, the chemical composition and size distribution need to be known. Measurements of four MAX-DOAS (multi-axis differential optical absorption spectroscopy instruments were used to retrieve vertical profiles of σep(λ. The values of the lowest layer were compared to the in-situ values after conversion of the latter ones to ambient

  19. Atmospheric Profile Imprint in Firewall Ablation Coefficient

    Science.gov (United States)

    Ceplecha, Z.; Pecina, P.

    1984-01-01

    A general formula which expresses the distance along the meteoric fireball trajectory 1 as a function of t is discussed. Differential equations which include the motion and ablation of a single nonfragmenting meteor body are presented. The importance of the atmospheric density profile in the meteor formula is emphasized.

  20. Using Airborne High Spectral Resolution Lidar Data to Evaluate Combined Active Plus Passive Retrievals of Aerosol Extinction Profiles

    Science.gov (United States)

    Burton, S. P.; Ferrare, R. A.; Hostetler, C. A.; Hair, J. W.; Kittaka, C.; Vaughn, M. A.; Remer, L. A.

    2010-01-01

    We derive aerosol extinction profiles from airborne and space-based lidar backscatter signals by constraining the retrieval with column aerosol optical thickness (AOT), with no need to rely on assumptions about aerosol type or lidar ratio. The backscatter data were acquired by the NASA Langley Research Center airborne High Spectral Resolution Lidar (HSRL) and by the Cloud-Aerosol Lidar with Orthogonal Polarization (CALIOP) instrument on the Cloud-Aerosol Lidar and Infrared Pathfinder Satellite Observation (CALIPSO) satellite. The HSRL also simultaneously measures aerosol extinction coefficients independently using the high spectral resolution lidar technique, thereby providing an ideal data set for evaluating the retrieval. We retrieve aerosol extinction profiles from both HSRL and CALIOP attenuated backscatter data constrained with HSRL, Moderate-Resolution Imaging Spectroradiometer (MODIS), and Multiangle Imaging Spectroradiometer column AOT. The resulting profiles are compared with the aerosol extinction measured by HSRL. Retrievals are limited to cases where the column aerosol thickness is greater than 0.2 over land and 0.15 over water. In the case of large AOT, the results using the Aqua MODIS constraint over water are poorer than Aqua MODIS over land or Terra MODIS. The poorer results relate to an apparent bias in Aqua MODIS AOT over water observed in August 2007. This apparent bias is still under investigation. Finally, aerosol extinction coefficients are derived from CALIPSO backscatter data using AOT from Aqua MODIS for 28 profiles over land and 9 over water. They agree with coincident measurements by the airborne HSRL to within +/-0.016/km +/- 20% for at least two-thirds of land points and within +/-0.028/km +/- 20% for at least two-thirds of ocean points.

  1. Variation of haemoglobin extinction coefficients can cause errors in the determination of haemoglobin concentration measured by near-infrared spectroscopy

    International Nuclear Information System (INIS)

    Kim, J G; Liu, H

    2007-01-01

    Near-infrared spectroscopy or imaging has been extensively applied to various biomedical applications since it can detect the concentrations of oxyhaemoglobin (HbO 2 ), deoxyhaemoglobin (Hb) and total haemoglobin (Hb total ) from deep tissues. To quantify concentrations of these haemoglobin derivatives, the extinction coefficient values of HbO 2 and Hb have to be employed. However, it was not well recognized among researchers that small differences in extinction coefficients could cause significant errors in quantifying the concentrations of haemoglobin derivatives. In this study, we derived equations to estimate errors of haemoglobin derivatives caused by the variation of haemoglobin extinction coefficients. To prove our error analysis, we performed experiments using liquid-tissue phantoms containing 1% Intralipid in a phosphate-buffered saline solution. The gas intervention of pure oxygen was given in the solution to examine the oxygenation changes in the phantom, and 3 mL of human blood was added twice to show the changes in [Hb total ]. The error calculation has shown that even a small variation (0.01 cm -1 mM -1 ) in extinction coefficients can produce appreciable relative errors in quantification of Δ[HbO 2 ], Δ[Hb] and Δ[Hb total ]. We have also observed that the error of Δ[Hb total ] is not always larger than those of Δ[HbO 2 ] and Δ[Hb]. This study concludes that we need to be aware of any variation in haemoglobin extinction coefficients, which could result from changes in temperature, and to utilize corresponding animal's haemoglobin extinction coefficients for the animal experiments, in order to obtain more accurate values of Δ[HbO 2 ], Δ[Hb] and Δ[Hb total ] from in vivo tissue measurements

  2. Variation of haemoglobin extinction coefficients can cause errors in the determination of haemoglobin concentration measured by near-infrared spectroscopy

    Science.gov (United States)

    Kim, J. G.; Liu, H.

    2007-10-01

    Near-infrared spectroscopy or imaging has been extensively applied to various biomedical applications since it can detect the concentrations of oxyhaemoglobin (HbO2), deoxyhaemoglobin (Hb) and total haemoglobin (Hbtotal) from deep tissues. To quantify concentrations of these haemoglobin derivatives, the extinction coefficient values of HbO2 and Hb have to be employed. However, it was not well recognized among researchers that small differences in extinction coefficients could cause significant errors in quantifying the concentrations of haemoglobin derivatives. In this study, we derived equations to estimate errors of haemoglobin derivatives caused by the variation of haemoglobin extinction coefficients. To prove our error analysis, we performed experiments using liquid-tissue phantoms containing 1% Intralipid in a phosphate-buffered saline solution. The gas intervention of pure oxygen was given in the solution to examine the oxygenation changes in the phantom, and 3 mL of human blood was added twice to show the changes in [Hbtotal]. The error calculation has shown that even a small variation (0.01 cm-1 mM-1) in extinction coefficients can produce appreciable relative errors in quantification of Δ[HbO2], Δ[Hb] and Δ[Hbtotal]. We have also observed that the error of Δ[Hbtotal] is not always larger than those of Δ[HbO2] and Δ[Hb]. This study concludes that we need to be aware of any variation in haemoglobin extinction coefficients, which could result from changes in temperature, and to utilize corresponding animal's haemoglobin extinction coefficients for the animal experiments, in order to obtain more accurate values of Δ[HbO2], Δ[Hb] and Δ[Hbtotal] from in vivo tissue measurements.

  3. Variation of haemoglobin extinction coefficients can cause errors in the determination of haemoglobin concentration measured by near-infrared spectroscopy

    Energy Technology Data Exchange (ETDEWEB)

    Kim, J G; Liu, H [Joint Graduate Program in Biomedical Engineering, University of Texas at Arlington/University of Texas Southwestern Medical Center at Dallas, Arlington, TX 76019 (United States)

    2007-10-21

    Near-infrared spectroscopy or imaging has been extensively applied to various biomedical applications since it can detect the concentrations of oxyhaemoglobin (HbO{sub 2}), deoxyhaemoglobin (Hb) and total haemoglobin (Hb{sub total}) from deep tissues. To quantify concentrations of these haemoglobin derivatives, the extinction coefficient values of HbO{sub 2} and Hb have to be employed. However, it was not well recognized among researchers that small differences in extinction coefficients could cause significant errors in quantifying the concentrations of haemoglobin derivatives. In this study, we derived equations to estimate errors of haemoglobin derivatives caused by the variation of haemoglobin extinction coefficients. To prove our error analysis, we performed experiments using liquid-tissue phantoms containing 1% Intralipid in a phosphate-buffered saline solution. The gas intervention of pure oxygen was given in the solution to examine the oxygenation changes in the phantom, and 3 mL of human blood was added twice to show the changes in [Hb{sub total}]. The error calculation has shown that even a small variation (0.01 cm{sup -1} mM{sup -1}) in extinction coefficients can produce appreciable relative errors in quantification of {delta}[HbO{sub 2}], {delta}[Hb] and {delta}[Hb{sub total}]. We have also observed that the error of {delta}[Hb{sub total}] is not always larger than those of {delta}[HbO{sub 2}] and {delta}[Hb]. This study concludes that we need to be aware of any variation in haemoglobin extinction coefficients, which could result from changes in temperature, and to utilize corresponding animal's haemoglobin extinction coefficients for the animal experiments, in order to obtain more accurate values of {delta}[HbO{sub 2}], {delta}[Hb] and {delta}[Hb{sub total}] from in vivo tissue measurements.

  4. Molecular extinction coefficients of lead sulfide and polymerized diaminobenzidine as final reaction products of histochemical phosphatase reactions

    NARCIS (Netherlands)

    van Noorden, C. J.; Jonges, G. N.

    1992-01-01

    Molar extinction coefficients of precipitated lead sulfide (PbS) and polymerized diaminobenzidine (polyDAB) have been determined at wavelengths of 450 nm and 480 nm, respectively, for quantitative histochemical analysis of phosphatase reactions. These values are essential for the conversion of

  5. Toward a Combined SAGE II-HALOE Aerosol Climatology: An Evaluation of HALOE Version 19 Stratospheric Aerosol Extinction Coefficient Observations

    Science.gov (United States)

    Thomason, L. W.

    2012-01-01

    Herein, the Halogen Occultation Experiment (HALOE) aerosol extinction coefficient data is evaluated in the low aerosol loading period after 1996 as the first necessary step in a process that will eventually allow the production of a combined HALOE/SAGE II (Stratospheric Aerosol and Gas Experiment) aerosol climatology of derived aerosol products including surface area density. Based on these analyses, it is demonstrated that HALOE's 3.46 microns is of good quality above 19 km and suitable for scientific applications above that altitude. However, it is increasingly suspect at lower altitudes and should not be used below 17 km under any circumstances after 1996. The 3.40 microns is biased by about 10% throughout the lower stratosphere due to the failure to clear NO2 but otherwise appears to be a high quality product down to 15 km. The 2.45 and 5.26 micron aerosol extinction coefficient measurements are clearly biased and should not be used for scientific applications after the most intense parts of the Pinatubo period. Many of the issues in the aerosol data appear to be related to either the failure to clear some interfering gas species or doing so poorly. For instance, it is clear that the 3.40micronaerosol extinction coefficient measurements can be improved through the inclusion of an NO2 correction and could, in fact, end up as the highest quality overall HALOE aerosol extinction coefficient measurement. It also appears that the 2.45 and 5.26 micron channels may be improved by updating the Upper Atmosphere Pilot Database which is used as a resource for the removal of gas species otherwise not available from direct HALOE measurements. Finally, a simple model to demonstrate the promise of mixed visible/infrared aerosol extinction coefficient ensembles for the retrieval of bulk aerosol properties demonstrates that a combined HALOE/SAGE II aerosol climatology is feasible and may represent a substantial improvement over independently derived data sets.

  6. Determination of a refractive index and an extinction coefficient of standard production of CVD-graphene.

    Science.gov (United States)

    Ochoa-Martínez, Efraín; Gabás, Mercedes; Barrutia, Laura; Pesquera, Amaia; Centeno, Alba; Palanco, Santiago; Zurutuza, Amaia; Algora, Carlos

    2015-01-28

    The refractive index and extinction coefficient of chemical vapour deposition grown graphene are determined by ellipsometry analysis. Graphene films were grown on copper substrates and transferred as both monolayers and bilayers onto SiO2/Si substrates by using standard manufacturing procedures. The chemical nature and thickness of residual debris formed after the transfer process were elucidated using photoelectron spectroscopy. The real layered structure so deduced has been used instead of the nominal one as the input in the ellipsometry analysis of monolayer and bilayer graphene, transferred onto both native and thermal silicon oxide. The effect of these contamination layers on the optical properties of the stacked structure is noticeable both in the visible and the ultraviolet spectral regions, thus masking the graphene optical response. Finally, the use of heat treatment under a nitrogen atmosphere of the graphene-based stacked structures, as a method to reduce the water content of the sample, and its effect on the optical response of both graphene and the residual debris layer are presented. The Lorentz-Drude model proposed for the optical response of graphene fits fairly well the experimental ellipsometric data for all the analysed graphene-based stacked structures.

  7. A High Molar Extinction Coefficient Mono-Anthracenyl Bipyridyl Heteroleptic Ruthenium(II Complex: Synthesis, Photophysical and Electrochemical Properties

    Directory of Open Access Journals (Sweden)

    Peter A. Ajibade

    2011-06-01

    Full Text Available In our quest to develop good materials as photosensitizers for photovoltaic dye-sensitized solar cells (DSSCs, cis-dithiocyanato-4-(2,3-dimethylacrylic acid-2,2'-bipyridyl-4-(9-anthracenyl-(2,3-dimethylacrylic-2,2'-bipyridyl ruthenium(II complex, a high molar extinction coefficient charge transfer sensitizer, was designed, synthesized and characterized by spectroscopy and electrochemical techniques. Earlier studies on heteroleptic ruthenium(II complex analogues containing functionalized oligo-anthracenyl phenanthroline ligands have been reported and documented. Based on a general linear correlation between increase in the length of π-conjugation bond and the molar extinction coefficients, herein, we report the photophysical and electrochemical properties of a Ru(II bipyridyl complex analogue with a single functionalized anthracenyl unit. Interestingly, the complex shows better broad and intense metal-to ligand charge transfer (MLCT band absorption with higher molar extinction coefficient (λmax = 518 nm, e = 44900 M−1cm−1, and appreciable photoluminescence spanning the visible region than those containing higher anthracenyl units. It was shown that molar absorption coefficient of the complexes may not be solely depended on the extended π-conjugation but are reduced by molecular aggregation in the molecules.

  8. Toward a combined SAGE II-HALOE aerosol climatology: an evaluation of HALOE version 19 stratospheric aerosol extinction coefficient observations

    Directory of Open Access Journals (Sweden)

    L. W. Thomason

    2012-09-01

    Full Text Available Herein, the Halogen Occultation Experiment (HALOE aerosol extinction coefficient data is evaluated in the low aerosol loading period after 1996 as the first necessary step in a process that will eventually allow the production of a combined HALOE/SAGE II (Stratospheric Aerosol and Gas Experiment aerosol climatology of derived aerosol products including surface area density. Based on these analyses, it is demonstrated that HALOE's 3.46 μm is of good quality above 19 km and suitable for scientific applications above that altitude. However, it is increasingly suspect at lower altitudes and should not be used below 17 km under any circumstances after 1996. The 3.40 μm is biased by about 10% throughout the lower stratosphere due to the failure to clear NO2 but otherwise appears to be a high quality product down to 15 km. The 2.45 and 5.26 μm aerosol extinction coefficient measurements are clearly biased and should not be used for scientific applications after the most intense parts of the Pinatubo period. Many of the issues in the aerosol data appear to be related to either the failure to clear some interfering gas species or doing so poorly. For instance, it is clear that the 3.40 μm aerosol extinction coefficient measurements can be improved through the inclusion of an NO2 correction and could, in fact, end up as the highest quality overall HALOE aerosol extinction coefficient measurement. It also appears that the 2.45 and 5.26 μm channels may be improved by updating the Upper Atmosphere Pilot Database which is used as a resource for the removal of gas species otherwise not available from direct HALOE measurements. Finally, a simple model to demonstrate the promise of mixed visible/infrared aerosol extinction coefficient ensembles for the retrieval of bulk aerosol properties demonstrates that a combined HALOE/SAGE II aerosol climatology is feasible and may represent a substantial improvement over independently derived

  9. Radiative and thermodynamic responses to aerosol extinction profiles during the pre-monsoon month over South Asia

    Energy Technology Data Exchange (ETDEWEB)

    Feng, Y.; Kotamarthi, V. R.; Coulter, R.; Zhao, C.; Cadeddu, M.

    2016-01-01

    Aerosol radiative effects and thermodynamic responses over South Asia are examined with the Weather Research and Forecasting model coupled with Chemistry (WRF-Chem) for March 2012. Model results of aerosol optical depths (AODs) and extinction profiles are analyzed and compared to satellite retrievals and two ground-based lidars located in northern India. The WRF-Chem model is found to heavily underestimate the AOD during the simulated pre-monsoon month and about 83 % of the model's low bias is due to aerosol extinctions below ~2 km. Doubling the calculated aerosol extinctions below 850 hPa generates much better agreement with the observed AOD and extinction profiles averaged over South Asia. To separate the effect of absorption and scattering properties, two runs were conducted: in one run (Case I), the calculated scattering and absorption coefficients were increased proportionally, while in the second run (Case II) only the calculated aerosol scattering coefficient was increased. With the same AOD and extinction profiles, the two runs produce significantly different radiative effects over land and oceans. On the regional mean basis, Case I generates 48 % more heating in the atmosphere and 21 % more dimming at the surface than Case II. Case I also produces stronger cooling responses over the land from the longwave radiation adjustment and boundary layer mixing. These rapid adjustments offset the stronger radiative heating in Case I and lead to an overall lower-troposphere cooling up to -0.7 K day−1, which is smaller than that in Case II. Over the ocean, direct radiative effects dominate the heating rate changes in the lower atmosphere lacking such surface and lower atmosphere adjustments due to fixed sea surface temperature, and the strongest atmospheric warming is obtained in Case I. Consequently, atmospheric dynamics (boundary layer heights and meridional circulation) and thermodynamic processes (water vapor and cloudiness) are shown to

  10. Radiative and thermodynamic responses to aerosol extinction profiles during the pre-monsoon month over South Asia

    Directory of Open Access Journals (Sweden)

    Y. Feng

    2016-01-01

    Full Text Available Aerosol radiative effects and thermodynamic responses over South Asia are examined with the Weather Research and Forecasting model coupled with Chemistry (WRF-Chem for March 2012. Model results of aerosol optical depths (AODs and extinction profiles are analyzed and compared to satellite retrievals and two ground-based lidars located in northern India. The WRF-Chem model is found to heavily underestimate the AOD during the simulated pre-monsoon month and about 83 % of the model's low bias is due to aerosol extinctions below  ∼  2 km. Doubling the calculated aerosol extinctions below 850 hPa generates much better agreement with the observed AOD and extinction profiles averaged over South Asia. To separate the effect of absorption and scattering properties, two runs were conducted: in one run (Case I, the calculated scattering and absorption coefficients were increased proportionally, while in the second run (Case II only the calculated aerosol scattering coefficient was increased. With the same AOD and extinction profiles, the two runs produce significantly different radiative effects over land and oceans. On the regional mean basis, Case I generates 48 % more heating in the atmosphere and 21 % more dimming at the surface than Case II. Case I also produces stronger cooling responses over the land from the longwave radiation adjustment and boundary layer mixing. These rapid adjustments offset the stronger radiative heating in Case I and lead to an overall lower-troposphere cooling up to −0.7 K day−1, which is smaller than that in Case II. Over the ocean, direct radiative effects dominate the heating rate changes in the lower atmosphere lacking such surface and lower atmosphere adjustments due to fixed sea surface temperature, and the strongest atmospheric warming is obtained in Case I. Consequently, atmospheric dynamics (boundary layer heights and meridional circulation and thermodynamic processes (water vapor and

  11. Aerosol Extinction Profile Mapping with Lognormal Distribution Based on MPL Data

    Science.gov (United States)

    Lin, T. H.; Lee, T. T.; Chang, K. E.; Lien, W. H.; Liu, G. R.; Liu, C. Y.

    2017-12-01

    This study intends to challenge the profile mapping of aerosol vertical distribution by mathematical function. With the similarity in distribution pattern, lognormal distribution is examined for mapping the aerosol extinction profile based on MPL (Micro Pulse LiDAR) in situ measurements. The variables of lognormal distribution are log mean (μ) and log standard deviation (σ), which will be correlated with the parameters of aerosol optical depht (AOD) and planetary boundary layer height (PBLH) associated with the altitude of extinction peak (Mode) defined in this study. On the base of 10 years MPL data with single peak, the mapping results showed that the mean error of Mode and σ retrievals are 16.1% and 25.3%, respectively. The mean error of σ retrieval can be reduced to 16.5% under the cases of larger distance between PBLH and Mode. The proposed method is further applied to MODIS AOD product in mapping extinction profile for the retrieval of PM2.5 in terms of satellite observations. The results indicated well agreement between retrievals and ground measurements when aerosols under 525 meters are well-mixed. The feasibility of proposed method to satellite remote sensing is also suggested by the case study. Keyword: Aerosol extinction profile, Lognormal distribution, MPL, Planetary boundary layer height (PBLH), Aerosol optical depth (AOD), Mode

  12. Cowpea, Common Bean And Mung Bean Radiation Use Efficiency, Light Extinction Coefficient And Radiation Interception In Double Cropping

    International Nuclear Information System (INIS)

    Alimadadi, A.; Rostamza, M.; Jahansooz, M.R.; Ahmadi, A.; Tavakol Afshari, R.

    2006-01-01

    Crop growth modeling for forecasting various plant's functions and their contribution to yield, is one of the ways to improve field management. This trial was set up to evaluate radiation use efficiency of mung bean, common bean and cowpea cultivars in a double cropping system. Field experiment was conducted at Research Farm of College of Agriculture, University of Tehran, Karaj. A 4-replicate group balanced block field experiment was set up. Results showed that the differences among three pulses were significant in terms of biomass (p0.05). Cowpea, producing 5876.8 Kg/ha, had the highest yield among the species used in this study. Comparison of grain yield observed in this experiment with mono crop yield potential, showed that cowpea, common bean and mung bean produced 40%, 37% and 58% of their mono crop grain yield potential, respectively. In the late vegetative growth period, cowpea, mung bean and common bean absorbed 90%, 33% and 36% of photosynthetic active radiation, respectively. There was a significant difference among pulses, in terms of their radiation use efficiency and light extinction coefficient (p0.05 and p0.01, respectively). Cowpea, common bean and mung bean had radiation use efficiencies of 0.84, 0.82 and 0.99, g/MJ and light extinction coefficients of 0.605, 0.344 and 0.458, respectively. Results indicated that in some cultivars, when K decreases and LAI increases, LUE might be increased twice

  13. A better coefficient of determination for genetic profile analysis.

    Science.gov (United States)

    Lee, Sang Hong; Goddard, Michael E; Wray, Naomi R; Visscher, Peter M

    2012-04-01

    Genome-wide association studies have facilitated the construction of risk predictors for disease from multiple Single Nucleotide Polymorphism markers. The ability of such "genetic profiles" to predict outcome is usually quantified in an independent data set. Coefficients of determination (R(2) ) have been a useful measure to quantify the goodness-of-fit of the genetic profile. Various pseudo-R(2) measures for binary responses have been proposed. However, there is no standard or consensus measure because the concept of residual variance is not easily defined on the observed probability scale. Unlike other nongenetic predictors such as environmental exposure, there is prior information on genetic predictors because for most traits there are estimates of the proportion of variation in risk in the population due to all genetic factors, the heritability. It is this useful ability to benchmark that makes the choice of a measure of goodness-of-fit in genetic profiling different from that of nongenetic predictors. In this study, we use a liability threshold model to establish the relationship between the observed probability scale and underlying liability scale in measuring R(2) for binary responses. We show that currently used R(2) measures are difficult to interpret, biased by ascertainment, and not comparable to heritability. We suggest a novel and globally standard measure of R(2) that is interpretable on the liability scale. Furthermore, even when using ascertained case-control studies that are typical in human disease studies, we can obtain an R(2) measure on the liability scale that can be compared directly to heritability. © 2012 Wiley Periodicals, Inc.

  14. A subtle calculation method for nanoparticle’s molar extinction coefficient: The gift from discrete protein-nanoparticle system on agarose gel electrophoresis

    Science.gov (United States)

    Zhong, Ruibo; Yuan, Ming; Gao, Haiyang; Bai, Zhijun; Guo, Jun; Zhao, Xinmin; Zhang, Feng

    2016-03-01

    Discrete biomolecule-nanoparticle (NP) conjugates play paramount roles in nanofabrication, in which the key is to get the precise molar extinction coefficient of NPs. By making best use of the gift from a specific separation phenomenon of agarose gel electrophoresis (GE), amphiphilic polymer coated NP with exact number of bovine serum albumin (BSA) proteins can be extracted and further experimentally employed to precisely calculate the molar extinction coefficient of the NPs. This method could further benefit the evaluation and extraction of any other dual-component NP-containing bio-conjugates.

  15. Spectro-ellipsometric studies of sputtered amorphous Titanium dioxide thin films: simultaneous determination of refractive index, extinction coefficient, and void distribution

    CERN Document Server

    Lee, S I; Oh, S G

    1999-01-01

    Amorphous titanium dioxide thin films were deposited onto silicon substrates by using RF magnetron sputtering, and the index of refraction, the extinction coefficient, and the void distribution of these films were simultaneously determined from the analyses of there ellipsometric spectra. In particular, our novel strategy, which combines the merits of multi-sample fitting, the dual dispersion function, and grid search, was proven successful in determining optical constants over a wide energy range, including the energy region where the extinction coefficient was large. Moreover, we found that the void distribution was dependent on the deposition conditions, such as the sputtering power, the substrate temperature, and the substrate surface.

  16. Determination of refractive index, extinction coefficient and thickness of thin films by the method of waveguide mode excitation

    Energy Technology Data Exchange (ETDEWEB)

    Sokolov, V I; Marusin, N V; Panchenko, V Ya; Savelyev, A G; Seminogov, V N; Khaydukov, E V [Institute on Laser and Information Technologies, Russian Academy of Sciences, Shatura, Moscow Region (Russian Federation)

    2013-12-31

    We propose a method for measuring simultaneously the refractive index n{sub f}, extinction coefficient m{sub f} and thickness H{sub f} of thin films. The method is based on the resonant excitation of waveguide modes in the film by a TE- or a TM-polarised laser beam in the geometry of frustrated total internal reflection. The values of n{sub f}, m{sub f} and H{sub f} are found by minimising the functional φ = [N{sup -1}Σ{sup N}{sub i=1}(R{sub exp}(θ{sub i}) – R{sub thr}(θ{sub i})){sup 2}]{sup 1/2}, where R{sub exp}(θ{sub i}) and R{sub thr}(θ{sub i}) are the experimental and theoretical coefficients of reflection of the light beam from the interface between the measuring prism and the film at an angle of incidence θ{sub i}. The errors in determining n{sub f}, m{sub f} and H{sub f} by this method are ±2 × 10{sup -4}, ±1 × 10{sup -3} and ±0.5%, respectively. (fiber and integrated optics)

  17. Digital Cover Photography for Estimating Leaf Area Index (LAI in Apple Trees Using a Variable Light Extinction Coefficient

    Directory of Open Access Journals (Sweden)

    Carlos Poblete-Echeverría

    2015-01-01

    Full Text Available Leaf area index (LAI is one of the key biophysical variables required for crop modeling. Direct LAI measurements are time consuming and difficult to obtain for experimental and commercial fruit orchards. Devices used to estimate LAI have shown considerable errors when compared to ground-truth or destructive measurements, requiring tedious site-specific calibrations. The objective of this study was to test the performance of a modified digital cover photography method to estimate LAI in apple trees using conventional digital photography and instantaneous measurements of incident radiation (Io and transmitted radiation (I through the canopy. Leaf area of 40 single apple trees were measured destructively to obtain real leaf area index (LAID, which was compared with LAI estimated by the proposed digital photography method (LAIM. Results showed that the LAIM was able to estimate LAID with an error of 25% using a constant light extinction coefficient (k = 0.68. However, when k was estimated using an exponential function based on the fraction of foliage cover (ff derived from images, the error was reduced to 18%. Furthermore, when measurements of light intercepted by the canopy (Ic were used as a proxy value for k, the method presented an error of only 9%. These results have shown that by using a proxy k value, estimated by Ic, helped to increase accuracy of LAI estimates using digital cover images for apple trees with different canopy sizes and under field conditions.

  18. Digital cover photography for estimating leaf area index (LAI) in apple trees using a variable light extinction coefficient.

    Science.gov (United States)

    Poblete-Echeverría, Carlos; Fuentes, Sigfredo; Ortega-Farias, Samuel; Gonzalez-Talice, Jaime; Yuri, Jose Antonio

    2015-01-28

    Leaf area index (LAI) is one of the key biophysical variables required for crop modeling. Direct LAI measurements are time consuming and difficult to obtain for experimental and commercial fruit orchards. Devices used to estimate LAI have shown considerable errors when compared to ground-truth or destructive measurements, requiring tedious site-specific calibrations. The objective of this study was to test the performance of a modified digital cover photography method to estimate LAI in apple trees using conventional digital photography and instantaneous measurements of incident radiation (Io) and transmitted radiation (I) through the canopy. Leaf area of 40 single apple trees were measured destructively to obtain real leaf area index (LAI(D)), which was compared with LAI estimated by the proposed digital photography method (LAI(M)). Results showed that the LAI(M) was able to estimate LAI(D) with an error of 25% using a constant light extinction coefficient (k = 0.68). However, when k was estimated using an exponential function based on the fraction of foliage cover (f(f)) derived from images, the error was reduced to 18%. Furthermore, when measurements of light intercepted by the canopy (Ic) were used as a proxy value for k, the method presented an error of only 9%. These results have shown that by using a proxy k value, estimated by Ic, helped to increase accuracy of LAI estimates using digital cover images for apple trees with different canopy sizes and under field conditions.

  19. Digital Cover Photography for Estimating Leaf Area Index (LAI) in Apple Trees Using a Variable Light Extinction Coefficient

    Science.gov (United States)

    Poblete-Echeverría, Carlos; Fuentes, Sigfredo; Ortega-Farias, Samuel; Gonzalez-Talice, Jaime; Yuri, Jose Antonio

    2015-01-01

    Leaf area index (LAI) is one of the key biophysical variables required for crop modeling. Direct LAI measurements are time consuming and difficult to obtain for experimental and commercial fruit orchards. Devices used to estimate LAI have shown considerable errors when compared to ground-truth or destructive measurements, requiring tedious site-specific calibrations. The objective of this study was to test the performance of a modified digital cover photography method to estimate LAI in apple trees using conventional digital photography and instantaneous measurements of incident radiation (Io) and transmitted radiation (I) through the canopy. Leaf area of 40 single apple trees were measured destructively to obtain real leaf area index (LAID), which was compared with LAI estimated by the proposed digital photography method (LAIM). Results showed that the LAIM was able to estimate LAID with an error of 25% using a constant light extinction coefficient (k = 0.68). However, when k was estimated using an exponential function based on the fraction of foliage cover (ff) derived from images, the error was reduced to 18%. Furthermore, when measurements of light intercepted by the canopy (Ic) were used as a proxy value for k, the method presented an error of only 9%. These results have shown that by using a proxy k value, estimated by Ic, helped to increase accuracy of LAI estimates using digital cover images for apple trees with different canopy sizes and under field conditions. PMID:25635411

  20. Calculation extinction cross sections and molar attenuation coefficient of small gold nanoparticles and experimental observation of their UV-vis spectral properties

    Science.gov (United States)

    Tang, Junqi; Gao, Kunpeng; Ou, Quanhong; Fu, Xuewen; Man, Shi-Qing; Guo, Jie; Liu, Yingkai

    2018-02-01

    Gold nanoparticles (AuNPs) have been researched extensively, such as applied in various biosensors, biomedical imaging and diagnosis, catalysis and physico-chemical analysis. These applications usually required to know the nanoparticle size or concentration. Researchers have been studying a simply and quick way to estimate the concentration or size of nanoparticles from their optical spectra and SPR feature for several years. The extinction cross-sections and the molar attenuation coefficient were one of the key parameters. In this study, we calculated the extinction cross-sections and molar attenuation coefficient (decadic molar extinction coefficient) of small gold nanoparticles by dipole approximation method and modified Beer-Lambert law. The theoretical result showed that the surface plasmon resonance peak of small gold nanoparticles was blueshift with an increase size. Moreover, small AuNPs (sub-10 nm) were prepared by using of dextran or trisodium citrate as reducing agent and capping agent. The experimental synthesized AuNPs was also shows a blueshift as increasing particle size in a certain range. And the concentration of AuNPs was calculated based on the obtained molar attenuation coefficient. For small nanoparticles, the size of nanoparticles and surface plasmon resonance property was not showed a positive correlation compared to larger nanoparticles. These results suggested that SPR peak depended not only on the nanoparticle size and shape but also on the nanoparticles environment.

  1. High Molar Extinction Coefficient Ru(II-Mixed Ligand Polypyridyl Complexes for Dye Sensitized Solar Cell Application

    Directory of Open Access Journals (Sweden)

    Malapaka Chandrasekharam

    2011-01-01

    Full Text Available Two new ruthenium(II mixed ligand terpyridine complexes, “Ru(Htcterpy(NCS(L1 (N(C4H94, mLBD1” and Ru(Htcterpy(NCS(L2(N(C4H94, mLBD2 were synthesized and fully characterized by UV-Vis, emission, cyclic voltammogram, and other spectroscopic means, and the structures of the compounds are confirmed by 1H-NMR, ESI-MASS, and FT-IR spectroscopes. The influence of the substitution of L1 and L2 on solar-to-electrical energy conversion efficiency (η of dye-sensitized solar cells (DSSCs was evaluated relative to reference black dye. The dyes showed molar extinction coefficients of 17600 M−1 cm−1 for mLBD1 and 21300 M−1 cm−1 for mLBD2 both at λ maximum of 512 nm, while black dye has shown 8660 M−1 cm−1 at λ maximum of 615 nm. The monochromatic incident photon-to-collected electron conversion efficiencies of 60.71% and 75.89% were obtained for mLBD1 and mLBD2 dyes, respectively. The energy conversion efficiencies of mLBD1 and mLBD2 dyes are 3.15% (SC=11.86 mA/cm2, OC=613 mV, ff=0.4337 and 3.36% (SC=12.71 mA/cm2, OC=655 mV, ff=0.4042, respectively, measured at the AM1.5G conditions, the reference black dye-sensitized solar cell, fabricated and evaluated under identical conditions exhibited η-value of 2.69% (SC=10.95 mA/cm2, OC=655 mV, ff=0.3750.

  2. Different trends in extreme and median surface aerosol extinction coefficients over China inferred from quality-controlled visibility data

    Science.gov (United States)

    Li, Jing; Li, Chengcai; Zhao, Chunsheng

    2018-03-01

    Although the temporal changes in aerosol properties have been widely investigated, the majority of studies has focused on average conditions without much emphasis on the extremes. However, the latter can be more important in terms of human health and climate change. This study uses a previously validated, quality-controlled visibility dataset to investigate the long-term trends (expressed in terms of relative changes) in extreme surface aerosol extinction coefficient (AEC) over China and compares them with the median trends. Two methods are used to independently evaluate the trends, which arrive at consistent results. The signs of extreme and median trends are generally coherent, whereas their magnitudes show distinct spatial and temporal differences. In the 1980s, an overall positive trend is found throughout China with the extreme trend exceeding the mean trend, except for northwest China and the North China Plain. In the 1990s, AEC over northeast and northwest China started to decline while the rest of the country still exhibited an increase. The extreme trends continued to dominate in the south while they yielded to the mean trend in the north. After the year 2000, the extreme trend became weaker than the mean trend overall in terms of both the magnitude and significance level. The annual trend can be primarily attributed to winter and fall trends. The results suggest that the decadal changes in pollution in China may be governed by different mechanisms. Synoptic conditions that often result in extreme air quality changes might have dominated in the 1980s, whereas emission increase might have been the main factor for the 2000s.

  3. Atmospheric Extinction Coefficients in the Ic Band for Several Major International Observatories: Results from the BiSON Telescopes, 1984-2016

    Science.gov (United States)

    Hale, S. J.; Chaplin, W. J.; Davies, G. R.; Elsworth, Y. P.; Howe, R.; Lund, M. N.; Moxon, E. Z.; Thomas, A.; Pallé, P. L.; Rhodes, E. J., Jr.

    2017-09-01

    Over 30 years of solar data have been acquired by the Birmingham Solar Oscillations Network (BiSON), an international network of telescopes used to study oscillations of the Sun. Five of the six BiSON telescopes are located at major observatories. The observational sites are, in order of increasing longitude: Mount Wilson (Hale) Observatory (MWO), California, USA; Las Campanas Observatory, Chile; Observatorio del Teide, Izaña, Tenerife, Canary Islands; the South African Astronomical Observatory, Sutherland, South Africa; Carnarvon, Western Australia; and the Paul Wild Observatory, Narrabri, New South Wales, Australia. The BiSON data may be used to measure atmospheric extinction coefficients in the {{{I}}}{{c}} band (approximately 700-900 nm), and presented here are the derived atmospheric extinction coefficients from each site over the years 1984-2016.

  4. A Profile-Based Framework for Factorial Similarity and the Congruence Coefficient.

    Science.gov (United States)

    Hartley, Anselma G; Furr, R Michael

    2017-01-01

    We present a novel profile-based framework for understanding factorial similarity in the context of exploratory factor analysis in general, and for understanding the congruence coefficient (a commonly used index of factor similarity) specifically. First, we introduce the profile-based framework articulating factorial similarity in terms of 3 intuitive components: general saturation similarity, differential saturation similarity, and configural similarity. We then articulate the congruence coefficient in terms of these components, along with 2 additional profile-based components, and we explain how these components resolve ambiguities that can be-and are-found when using the congruence coefficient. Finally, we present secondary analyses revealing that profile-based components of factorial are indeed linked to experts' actual evaluations of factorial similarity. Overall, the profile-based approach we present offers new insights into the ways in which researchers can examine factor similarity and holds the potential to enhance researchers' ability to understand the congruence coefficient.

  5. DFT-INDO/S modeling of new high molar extinction coefficient charge-transfer sensitizers for solar cell applications.

    Science.gov (United States)

    Nazeeruddin, Mohammad K; Wang, Qing; Cevey, Le; Aranyos, Viviane; Liska, Paul; Figgemeier, Egbert; Klein, Cedric; Hirata, Narukuni; Koops, Sara; Haque, Saif A; Durrant, James R; Hagfeldt, Anders; Lever, A B P; Grätzel, Michael

    2006-01-23

    A new ruthenium(II) complex, tetrabutylammonium [ruthenium (4-carboxylic acid-4'-carboxylate-2,2'-bipyridine)(4,4'-di(2-(3,6-dimethoxyphenyl)ethenyl)-2,2'-bipyridine)(NCS)(2)] (N945H), was synthesized and characterized by analytical, spectroscopic, and electrochemical techniques. The absorption spectrum of the N945H sensitizer is dominated by metal-to-ligand charge-transfer (MLCT) transitions in the visible region, with the lowest allowed MLCT bands appearing at 25 380 and 18 180 cm(-1). The molar extinction coefficients of these bands are 34 500 and 18 900 M(-1) cm(-1), respectively, and are significantly higher when compared to than those of the standard sensitizer cis-dithiocyanatobis(4,4'-dicarboxylic acid-2,2'-bipyridine)ruthenium(II). An INDO/S and density functional theory study of the electronic and optical properties of N945H and of N945 adsorbed on TiO(2) was performed. The calculations point out that the top three frontier-filled orbitals have essentially ruthenium 4d (t(2g) in the octahedral group) character with sizable contribution coming from the NCS ligand orbitals. Most critically the calculations reveal that, in the TiO(2)-bound N945 sensitizer, excitation directs charge into the carboxylbipyridine ligand bound to the TiO(2) surface. The photovoltaic data of the N945 sensitizer using an electrolyte containing 0.60 M butylmethylimidazolium iodide, 0.03 M I(2), 0.10 M guanidinium thiocyanate, and 0.50 M tert-butylpyridine in a mixture of acetonitrile and valeronitrile (volume ratio = 85:15) exhibited a short-circuit photocurrent density of 16.50 +/- 0.2 mA cm(-2), an open-circuit voltage of 790 +/- 30 mV, and a fill factor of 0.72 +/- 0.03, corresponding to an overall conversion efficiency of 9.6% under standard AM (air mass) 1.5 sunlight, and demonstrated a stable performance under light and heat soaking at 80 degrees C.

  6. Monte Carlo simulation of diffuse attenuation coefficient in presence of non uniform profiles

    Digital Repository Service at National Institute of Oceanography (India)

    Desa, E; Desai, R.G.P.; Desa, B.A.E

    This paper presents a Monte Carlo simulation of the vertical depth structure of the downward attenuation coefficient (K sub(d)), and the irradiance reflectance (R) for a given profile of chlorophyll. The results are in quantitaive agreement...

  7. Seasonal atmospheric extinction

    International Nuclear Information System (INIS)

    Mikhail, J.S.

    1979-01-01

    Mean monochromatic extinction coefficients at various wavelengths at the Kottamia Observatory site have shown the existence of a seasonal variation of atmospheric extinction. The extinction of aerosol compontnts with wavelengths at winter represent exceedingly good conditions. Spring gives the highest extinction due to aerosol. (orig.)

  8. Aerosol extinction profiles at 525 nm and 1020 nm derived from ACE imager data: comparisons with GOMOS, SAGE II, SAGE III, POAM III, and OSIRIS

    Directory of Open Access Journals (Sweden)

    F. Vanhellemont

    2008-04-01

    Full Text Available The Canadian ACE (Atmospheric Chemistry Experiment mission is dedicated to the retrieval of a large number of atmospheric trace gas species using the solar occultation technique in the infrared and UV/visible spectral domain. However, two additional solar disk imagers (at 525 nm and 1020 nm were added for a number of reasons, including the retrieval of aerosol and cloud products. In this paper, we present first comparison results for these imager aerosol/cloud optical extinction coefficient profiles, with the ones derived from measurements performed by 3 solar occultation instruments (SAGE II, SAGE III, POAM III, one stellar occultation instrument (GOMOS and one limb sounder (OSIRIS. The results indicate that the ACE imager profiles are of good quality in the upper troposphere/lower stratosphere, although the aerosol extinction for the visible channel at 525 nm contains a significant negative bias at higher altitudes, while the relative differences indicate that ACE profiles are almost always too high at 1020 nm. Both problems are probably related to ACE imager instrumental issues.

  9. Characterizing the Vertical Profile of Aerosol Particle Extinction and Linear Depolarization over Southeast Asia and the Maritime Continent: The 2007-2009 View from CALIOP

    Science.gov (United States)

    Campbell, James R.; Reid, Jeffrey S.; Westphal, Douglas L.; Zhang, Jianglong; Tackett, Jason L.; Chew, Boon Ning; Welton, Ellsworth J.; Shimizu, Atsushi; Sugimoto, Nobuo; Aoki, Kazuma; hide

    2012-01-01

    Vertical profiles of 0.532 µm aerosol particle extinction coefficient and linear volume depolarization ratio are described for Southeast Asia and the Maritime Continent. Quality-screened and cloud-cleared Version 3.01 Level 2 NASA Cloud Aerosol Lidar with Orthogonal Polarization (CALIOP) 5-km Aerosol Profile datasets are analyzed from 2007 to 2009. Numerical simulations from the U.S. Naval Aerosol Analysis and Predictive System (NAAPS), featuring two-dimensional variational assimilation of NASA Moderate Resolution Imaging Spectroradiometer and Multi-angle Imaging Spectro- Radiometer quality-assured datasets, combined with regional ground-based lidar measurements, are considered for assessing CALIOP retrieval performance, identifying bias, and evaluating regional representativeness. CALIOP retrievals of aerosol particle extinction coefficient and aerosol optical depth (AOD) are high over land and low over open waters relative to NAAPS (0.412/0.312 over land for all data points inclusive, 0.310/0.235 when the per bin average is used and each is treated as single data points; 0.102/0.151 and 0.086/0.124, respectively, over ocean). Regional means, however, are very similar (0.180/0.193 for all data points and 0.155/0.159 when averaged per normalized bin), as the two factors offset one another. The land/ocean offset is investigated, and discrepancies attributed to interpretation of particle composition and a-priori assignment of the extinction-to-backscatter ratio ("lidar ratio") necessary for retrieving the extinction coefficient from CALIOP signals. Over land, NAAPS indicates more dust present than CALIOP algorithms are identifying, indicating a likely assignment of a higher lidar ratio representative of more absorptive particles. NAAPS resolvesmore smoke overwater than identified with CALIOP, indicating likely usage of a lidar ratio characteristic of less absorptive particles to be applied that biases low AOD there. Over open waters except within the Bay of Bengal

  10. On-site ocean horizontal aerosol extinction coefficient inversion under different weather conditions on the Bo-hai and Huang-hai Seas

    Science.gov (United States)

    Zeng, Xianjiang; Xia, Min; Ge, Yinghui; Guo, Wenping; Yang, Kecheng

    2018-03-01

    In this paper, we explore the horizontal extinction characteristics under different weather conditions on the ocean surface with on-site experiments on the Bo-hai and Huang-hai Seas in the summer of 2016. An experimental lidar system is designed to collect the on-site experimental data. By aiming at the inhomogeneity and uncertainty of the horizontal aerosol in practice, a joint retrieval method is proposed to retrieve the aerosol extinction coefficients (AEC) from the raw data along the optical path. The retrieval results of both the simulated and the real signals demonstrate that the joint retrieval method is practical. Finally, the sequence observation results of the on-site experiments under different weather conditions are reported and analyzed. These results can provide the attenuation information to analyze the atmospheric aerosol characteristics on the ocean surface.

  11. Accelerated and Decelerated Flows in a Circular Pipe : 1st Report, Velocity Profile and Friction Coefficient

    OpenAIRE

    Kurokawa, Junichi; Morikawa, Masahiro

    1986-01-01

    In order to determine the flow characteristics of a transient flow in a circular pipe, an accelerated and a decelerated flow are studied, and effects of acceleration upon the formation of a velocity profile, transition and a friction coefficient are determined for a wide range of accelerations. The results of the accelerated flow show that there are two patterns in the formation of a sectional velocity profile and transition, one of which is observed when the acceleration is relatively large ...

  12. Evaluation of diffusion coefficients from composition profiles - the influence of trapping

    DEFF Research Database (Denmark)

    Christiansen, Thomas; Somers, Marcel A. J.

    2006-01-01

    The applicability of the Boltzmann-Matano method for evaluation of a diffusion coefficient and its concentration dependency by line profile analysis is tested on three different (model) systems. All systems involve interstitial diffusion. It is shown that the occurrence of trapping corrupts...... the applicability of the Boltzmann-Matano method....

  13. Prediction of Molar Extinction Coefficients of Proteins and Peptides Using UV Absorption of the Constituent Amino Acids at 214 nm To Enable Quantitative Reverse Phase High-Performance Liquid Chromatography-Mass Spectrometry Analysis

    NARCIS (Netherlands)

    Kuipers, B.J.H.; Gruppen, H.

    2007-01-01

    The molar extinction coefficients of 20 amino acids and the peptide bond were measured at 214 nm in the presence of acetonitrile and formic acid to enable quantitative comparison of peptides eluting from reversed-phase high-performance liquid chromatography, once identified with mass spectrometry

  14. Calculating the heat transfer coefficient of frame profiles with internal cavities

    DEFF Research Database (Denmark)

    Noyé, Peter Anders; Laustsen, Jacob Birck; Svendsen, Svend

    2004-01-01

    . The heat transfer coefficient is determined by two-dimensional numerical calculations and by measurements. Calculations are performed in Therm (LBNL (2001)), which is developed at Lawrence Berkeley National Laboratory, USA. The calculations are performed in accordance with the future European standards...... correspondence between measured and calculated values. Hence, when determining the heat transfer coefficient of frame profiles with internal cavities by calculations, it is necessary to apply a more detailed radiation exchange model than described in the prEN ISO 10077-2 standard. The ISO-standard offers......Determining the energy performance of windows requires detailed knowledge of the thermal properties of their different elements. A series of standards and guidelines exist in this area. The thermal properties of the frame can be determined either by detailed two-dimensional numerical methods...

  15. Spectral line profile analysis for evaluation of Gaussian and Lorentzian widths and collisional broadening coefficient

    International Nuclear Information System (INIS)

    Nakhate, S.G.; Ahmad, S.A.; Pushpa; Rao, M.; Saksena, G.D.

    1991-01-01

    Deconvolution of atomic line profiles, recorded on PC interfaced recording Fabry-Perot spectrometer, into its Lorentzian and Gaussian component has been carried out. Effect of various parameters of hollow cathode discharge lamp (light source) such as discharge current, bath temperature and gas pressure on Lorentzian and Gaussian width has been studied. The value of the self-broadening coefficient for neon-neon atomic interaction for the transition 2p 5 4P-2P 5 3s (λ=3472.571 A) has been determined. (author). 15 refs., 6 figs., 4 tabs

  16. An improved procedure for determining grain boundary diffusion coefficients from averaged concentration profiles

    Science.gov (United States)

    Gryaznov, D.; Fleig, J.; Maier, J.

    2008-03-01

    Whipple's solution of the problem of grain boundary diffusion and Le Claire's relation, which is often used to determine grain boundary diffusion coefficients, are examined for a broad range of ratios of grain boundary to bulk diffusivities Δ and diffusion times t. Different reasons leading to errors in determining the grain boundary diffusivity (DGB) when using Le Claire's relation are discussed. It is shown that nonlinearities of the diffusion profiles in lnCav-y6/5 plots and deviations from "Le Claire's constant" (-0.78) are the major error sources (Cav=averaged concentration, y =coordinate in diffusion direction). An improved relation (replacing Le Claire's constant) is suggested for analyzing diffusion profiles particularly suited for small diffusion lengths (short times) as often required in diffusion experiments on nanocrystalline materials.

  17. Vertical profiles of aerosol absorption coefficient from micro-Aethalometer data and Mie calculation over Milan.

    Science.gov (United States)

    Ferrero, L; Mocnik, G; Ferrini, B S; Perrone, M G; Sangiorgi, G; Bolzacchini, E

    2011-06-15

    Vertical profiles of aerosol number-size distribution and black carbon (BC) concentration were measured between ground-level and 500m AGL over Milan. A tethered balloon was fitted with an instrumentation package consisting of the newly-developed micro-Aethalometer (microAeth® Model AE51, Magee Scientific, USA), an optical particle counter, and a portable meteorological station. At the same time, PM(2.5) samples were collected both at ground-level and at a high altitude sampling site, enabling particle chemical composition to be determined. Vertical profiles and PM(2.5) data were collected both within and above the mixing layer. Absorption coefficient (b(abs)) profiles were calculated from the Aethalometer data: in order to do so, an optical enhancement factor (C), accounting for multiple light-scattering within the filter of the new microAeth® Model AE51, was determined for the first time. The value of this parameter C (2.05±0.03 at λ=880nm) was calculated by comparing the Aethalometer attenuation coefficient and aerosol optical properties determined from OPC data along vertical profiles. Mie calculations were applied to the OPC number-size distribution data, and the aerosol refractive index was calculated using the effective medium approximation applied to aerosol chemical composition. The results compare well with AERONET data. The BC and b(abs) profiles showed a sharp decrease at the mixing height (MH), and fairly constant values of b(abs) and BC were found above the MH, representing 17±2% of those values measured within the mixing layer. The BC fraction of aerosol volume was found to be lower above the MH: 48±8% of the corresponding ground-level values. A statistical mean profile was calculated, both for BC and b(abs), to better describe their behaviour; the model enabled us to compute their average behaviour as a function of height, thus laying the foundations for valid parametrizations of vertical profile data which can be useful in both remote sensing

  18. The effect of recombination and attachment on meteor radar diffusion coefficient profiles

    Science.gov (United States)

    Lee, C. S.; Younger, J. P.; Reid, I. M.; Kim, Y. H.; Kim, J.-H.

    2013-04-01

    Estimates of the ambipolar diffusion coefficient producedusing meteor radar echo decay times display an increasing trend below 80-85 km, which is inconsistent with a diffusion-only theory of the evolution of meteor trails. Data from the 33 MHz meteor radar at King Sejong Station, Antarctica, have been compared with observations from the Aura Earth Observing System Microwave Limb Sounder satellite instrument. It has been found that the height at which the diffusion coefficient gradient reverses follows the height of a constant neutral atmospheric density surface. Numerical simulations of meteor trail diffusion including dissociative recombination with atmospheric ions and three-body attachment of free electrons to neutral molecules indicate that three-body attachment is responsible for the distortion of meteor radar diffusion coefficient profiles at heights below 90 km, including the gradient reversal below 80-85 km. Further investigation has revealed that meteor trails with low initial electron line density produce decay times more consistent with a diffusion-only model of meteor trail evolution.

  19. Significant Differences Characterise the Correlation Coefficients between Biocide and Antibiotic Susceptibility Profiles in Staphylococcus aureus.

    Science.gov (United States)

    Oggioni, Marco R; Coelho, Joana Rosado; Furi, Leonardo; Knight, Daniel R; Viti, Carlo; Orefici, Graziella; Martinez, Jose-Luis; Freitas, Ana Teresa; Coque, Teresa M; Morrissey, Ian

    2015-01-01

    There is a growing concern by regulatory authorities for the selection of antibiotic resistance caused by the use of biocidal products. We aimed to complete the detailed information on large surveys by investigating the relationship between biocide and antibiotic susceptibility profiles of a large number of Staphylococcus aureus isolates using four biocides and antibiotics commonly used in clinical practice. The minimal inhibitory concentration (MIC) for most clinically-relevant antibiotics was determined according to the standardized methodology for over 1600 clinical S. aureus isolates and compared to susceptibility profiles of benzalkonium chloride, chlorhexidine, triclosan, and sodium hypochlorite. The relationship between antibiotic and biocide susceptibility profiles was evaluated using non-linear correlations. The main outcome evidenced was an absence of any strong or moderate statistically significant correlation when susceptibilities of either triclosan or sodium hypochlorite were compared for any of the tested antibiotics. On the other hand, correlation coefficients for MICs of benzalkonium chloride and chlorhexidine were calculated above 0.4 for susceptibility to quinolones, beta-lactams, and also macrolides. Our data do not support any selective pressure for association between biocides and antibiotics resistance and furthermore do not allow for a defined risk evaluation for some of the compounds. Importantly, our data clearly indicate that there does not involve any risk of selection for antibiotic resistance for the compounds triclosan and sodium hypochlorite. These data hence infer that biocide selection for antibiotic resistance has had so far a less significant impact than feared.

  20. Mis-estimation and bias of hyperpolarized apparent diffusion coefficient measurements due to slice profile effects.

    Science.gov (United States)

    Gordon, Jeremy W; Milshteyn, Eugene; Marco-Rius, Irene; Ohliger, Michael; Vigneron, Daniel B; Larson, Peder E Z

    2017-09-01

    The purpose of this work was to explore the impact of slice profile effects on apparent diffusion coefficient (ADC) mapping of hyperpolarized (HP) substrates. Slice profile effects were simulated using a Gaussian radiofrequency (RF) pulse with a variety of flip angle schedules and b-value ordering schemes. A long T 1 water phantom was used to validate the simulation results, and ADC mapping of HP [ 13 C, 15 N 2 ]urea was performed on the murine liver to assess these effects in vivo. Slice profile effects result in excess signal after repeated RF pulses, causing bias in HP measurements. The largest error occurs for metabolites with small ADCs, resulting in up to 10-fold overestimation for metabolites that are in more-restricted environments. A mixed b-value scheme substantially reduces this bias, whereas scaling the slice-select gradient can mitigate it completely. In vivo, the liver ADC of hyperpolarized [ 13 C, 15 N 2 ]urea is nearly 70% lower (0.99 ± 0.22 vs 1.69 ± 0.21 × 10 -3 mm 2 /s) when slice-select gradient scaling is used. Slice profile effects can lead to bias in HP ADC measurements. A mixed b-value ordering scheme can reduce this bias compared to sequential b-value ordering. Slice-select gradient scaling can also correct for this deviation, minimizing bias and providing more-precise ADC measurements of HP substrates. Magn Reson Med 78:1087-1092, 2017. © 2016 International Society for Magnetic Resonance in Medicine. © 2016 International Society for Magnetic Resonance in Medicine.

  1. The opacity of spiral galaxy disks. IV. Radial extinction profiles from counts of distant galaxies seen through foreground disks

    NARCIS (Netherlands)

    Holwerda, BW; Gonzalez, RA; Allen, RJ; van der Kruit, PC

    Dust extinction can be determined from the number of distant field galaxies seen through a spiral disk. To calibrate this number for the crowding and confusion introduced by the foreground image, Gonzalez et al. and Holwerda et al. developed the Synthetic Field Method (SFM), which analyzes synthetic

  2. Evaluations on Profiles of the Eddy Diffusion Coefficients through Simulations of Super Typhoons in the Northwestern Pacific

    Directory of Open Access Journals (Sweden)

    Jimmy Chi Hung Fung

    2016-01-01

    Full Text Available The modeling of the eddy diffusion coefficients (also known as eddy diffusivity in the first-order turbulence closure schemes is important for the typhoon simulations, since the coefficients control the magnitude of the sensible heat flux and the latent heat flux, which are energy sources for the typhoon intensification. Profiles of the eddy diffusion coefficients in the YSU planetary boundary layer (PBL scheme are evaluated in the advanced research WRF (ARW system. Three versions of the YSU scheme (original, K025, and K200 are included in this study. The simulation results are compared with the observational data from track, center sea-level pressure (CSLP, and maximum surface wind speed (MWSP. Comparing with the original version, the K200 improves the averaged mean absolute errors (MAE of track, CSLP, and MWSP by 6.0%, 3.7%, and 23.1%, respectively, while the K025 deteriorates the averaged MAEs of track, CSLP, and MWSP by 25.1%, 19.0%, and 95.0%, respectively. Our results suggest that the enlarged eddy diffusion coefficients may be more suitable for super typhoon simulations.

  3. Rethinking Extinction

    Science.gov (United States)

    Dunsmoor, Joseph E.; Niv, Yael; Daw, Nathaniel; Phelps, Elizabeth A.

    2015-01-01

    Extinction serves as the leading theoretical framework and experimental model to describe how learned behaviors diminish through absence of anticipated reinforcement. In the past decade, extinction has moved beyond the realm of associative learning theory and behavioral experimentation in animals and has become a topic of considerable interest in the neuroscience of learning, memory, and emotion. Here, we review research and theories of extinction, both as a learning process and as a behavioral technique, and consider whether traditional understandings warrant a re-examination. We discuss the neurobiology, cognitive factors, and major computational theories, and revisit the predominant view that extinction results in new learning that interferes with expression of the original memory. Additionally, we reconsider the limitations of extinction as a technique to prevent the relapse of maladaptive behavior, and discuss novel approaches, informed by contemporary theoretical advances, that augment traditional extinction methods to target and potentially alter maladaptive memories. PMID:26447572

  4. Rethinking Extinction

    OpenAIRE

    Dunsmoor, Joseph E.; Niv, Yael; Daw, Nathaniel; Phelps, Elizabeth A.

    2015-01-01

    Extinction serves as the leading theoretical framework and experimental model to describe how learned behaviors diminish through absence of anticipated reinforcement. In the past decade, extinction has moved beyond the realm of associative learning theory and behavioral experimentation in animals and has become a topic of considerable interest in the neuroscience of learning, memory, and emotion. Here, we review research and theories of extinction, both as a learning process and as a behavior...

  5. Determination of the radial profile of the photoelastic coefficient of polymer optical fibers

    Science.gov (United States)

    Acheroy, Sophie; Merken, Patrick; Geernaert, Thomas; Ottevaere, Heidi; Thienpont, Hugo; Berghmans, Francis

    2016-04-01

    We determine the radial profile of the photoelastic constant C(r) in two single mode and one multimode polymer optical fibers (POFs), all fabricated from polymethylmethacrylate (PMMA). To determine C(r) we first determine the retardance of the laterally illuminated fiber submitted to a known tensile stress uniformly distributed over the fiber cross-section. Then we determine the inverse Abel transform of the measured retardance to finally obtain C(r). We compare two algorithms based on the Fourier theory to perform the inverse transform. We obtain disparate distributions of C(r) in the three fibers. The mean value of C(r) varies from -7.6×10-14 to 5.4×10-12 Pa-1. This indicates that, in contrast to glass fibers, the radial profile of the photoelastic constant can considerable vary depending on the type and treatment of POFs, even when made from similar materials, and hence the photoelastic constant should be measured for each type of POF.

  6. Traumatic stress causes distinctive effects on fear circuit catecholamines and the fear extinction profile in a rodent model of posttraumatic stress disorder.

    Science.gov (United States)

    Lin, Chen-Cheng; Tung, Che-Se; Lin, Pin-Hsuan; Huang, Chuen-Lin; Liu, Yia-Ping

    2016-09-01

    Central catecholamines regulate fear memory across the medial prefrontal cortex (mPFC), amygdala (AMYG), and hippocampus (HPC). However, inadequate evidence exists to address the relationships among these fear circuit areas in terms of the fear symptoms of posttraumatic stress disorder (PTSD). By examining the behavioral profile in a Pavlovian fear conditioning paradigm together with tissue/efflux levels of dopamine (DA) and norepinephrine (NE) and their reuptake abilities across the fear circuit areas in rats that experienced single prolonged stress (SPS, a rodent model of PTSD), we demonstrated that SPS-impaired extinction retrieval was concomitant with the changes of central DA/NE in a dissociable manner. For tissue levels, diminished DA and increased NE were both observed in the mPFC and AMYG. DA efflux and synaptosomal DA transporter were consistently reduced in the AMYG/vHPC, whereas SPS reduced NE efflux in the infralimbic cortex and synaptosomal NE transporter in the mPFC. Furthermore, a lower expression of synaptosomal VMAT2 was observed in the mPFC, AMYG, and vHPC after SPS. Finally, negative correlations were observed between retrieval freezing and DA in the mPFC/AMYG; nevertheless, the phenomena became invalid after SPS. Our results suggest that central catecholamines are crucially involved in the retrieval of fear extinction in which DA and NE play distinctive roles across the fear circuit areas. Copyright © 2016 Elsevier B.V. and ECNP. All rights reserved.

  7. A differential evolution algorithm for tooth profile optimization with respect to balancing specific sliding coefficients of involute cylindrical spur and helical gears

    Directory of Open Access Journals (Sweden)

    Hammoudi Abderazek

    2015-09-01

    Full Text Available Profile shift has an immense effect on the sliding, load capacity, and stability of involute cylindrical gears. Available standards such as ISO/DIS 6336 and BS 436 DIN/3990 currently give the recommendation for the selection of profile shift coefficients. It is, however, very approximate and usually given in the form of implicit graphs or charts. In this article, the optimal selection values of profile shift coefficients for cylindrical involute spur and helical gears are described, using a differential evolution algorithm. The optimization procedure is developed specifically for exact balancing specific sliding coefficients at extremes of contact path and account for gear design constraints. The obtained results are compared with those of standards and research of other authors. They demonstrate the effectiveness and robustness of the applied method. A substantial improvement in balancing specific sliding coefficients is found in this work.

  8. THE SECONDARY EXTINCTION CORRECTION

    Energy Technology Data Exchange (ETDEWEB)

    Zachariasen, W. H.

    1963-03-15

    It is shown that Darwin's formula for the secondary extinction correction, which has been universally accepted and extensively used, contains an appreciable error in the x-ray diffraction case. The correct formula is derived. As a first order correction for secondary extinction, Darwin showed that one should use an effective absorption coefficient mu + gQ where an unpolarized incident beam is presumed. The new derivation shows that the effective absorption coefficient is mu + 2gQ(1 + cos/sup 4/2 theta )/(1 plus or minus cos/sup 2/2 theta )/s up 2/, which gives mu + gQ at theta =0 deg and theta = 90 deg , but mu + 2gQ at theta = 45 deg . Darwin's theory remains valid when applied to neutron diffraction. (auth)

  9. Validation of CALIPSO space-borne-derived attenuated backscatter coefficient profiles using a ground-based lidar in Athens, Greece

    Directory of Open Access Journals (Sweden)

    R. E. Mamouri

    2009-09-01

    Full Text Available We present initial aerosol validation results of the space-borne lidar CALIOP -onboard the CALIPSO satellite- Level 1 attenuated backscatter coefficient profiles, using coincident observations performed with a ground-based lidar in Athens, Greece (37.9° N, 23.6° E. A multi-wavelength ground-based backscatter/Raman lidar system is operating since 2000 at the National Technical University of Athens (NTUA in the framework of the European Aerosol Research LIdar NETwork (EARLINET, the first lidar network for tropospheric aerosol studies on a continental scale. Since July 2006, a total of 40 coincidental aerosol ground-based lidar measurements were performed over Athens during CALIPSO overpasses. The ground-based measurements were performed each time CALIPSO overpasses the station location within a maximum distance of 100 km. The duration of the ground–based lidar measurements was approximately two hours, centred on the satellite overpass time. From the analysis of the ground-based/satellite correlative lidar measurements, a mean bias of the order of 22% for daytime measurements and of 8% for nighttime measurements with respect to the CALIPSO profiles was found for altitudes between 3 and 10 km. The mean bias becomes much larger for altitudes lower that 3 km (of the order of 60% which is attributed to the increase of aerosol horizontal inhomogeneity within the Planetary Boundary Layer, resulting to the observation of possibly different air masses by the two instruments. In cases of aerosol layers underlying Cirrus clouds, comparison results for aerosol tropospheric profiles become worse. This is attributed to the significant multiple scattering effects in Cirrus clouds experienced by CALIPSO which result in an attenuation which is less than that measured by the ground-based lidar.

  10. A High Molar Extinction Coefficient Ru(II Complex Functionalized with cis-Dithiocyanato-bis-(9-anthracenyl-10-(2-methyl-2-butenoic acid-1,10-phenanthroline: Potential Sensitizer for Stable Dye-Sensitized Solar Cells

    Directory of Open Access Journals (Sweden)

    Adewale O. Adeloye

    2014-01-01

    Full Text Available New heteroleptic ruthenium(II complex was formulated as [Ru(L12(NCS2], where L1 = 9-anthracenyl-10-(2-methyl-2-butenoic acid-1,10-phenanthroline was synthesized and its photophysical properties were studied and compared to previously reported analogue complex containing no anthracene moiety [Ru(L22(NCS2], L2 = (2-methyl-2-butenoic acid-1,10-phenanthroline. The two complexes though exhibit very strong molar extinction coefficient values; however, [Ru(L12(NCS2] shows better characteristic broad and intense metal-to-ligand charge transfer (MLCT absorption band and higher molar absorptivity coefficient at (λmax=522 nm, ε=6.60×104 M−1 cm−1 than that of [Ru(L22(NCS2] complex, (λmax=446 nm, ε=4.82×104 M−1 cm−1. At room temperature, long wavelength emissions with strong intensity ratio centered at 660 nm were recorded for [Ru(L12(NCS2] complex with a bathochromic shift (λem=700 nm for [Ru(L22(NCS2] complex. It was shown that the luminescence wavelength characteristic of the complexes may be a function relating to the increasing length of π-conjugation and/or molecular weight. A preliminary cyclic voltammetry of [Ru(L12(NCS2] complex also exhibits good electroredox activity with oxidation potential of about 1.04 V, significantly better than other Ru(II polypyridine complexes containing bidentate ligands.

  11. ASOS Surface Extinction Coefficient by STI

    Data.gov (United States)

    Washington University St Louis — ASOS_STI represents a 250-station subset of the national ASOS SURF_MET dataset. The unique feature of this data is that the visibility sensor values are available in...

  12. Interstellar Extinction

    OpenAIRE

    Gontcharov, George

    2017-01-01

    This review describes our current understanding of interstellar extinction. This differ substantially from the ideas of the 20th century. With infrared surveys of hundreds of millions of stars over the entire sky, such as 2MASS, SPITZER-IRAC, and WISE, we have looked at the densest and most rarefied regions of the interstellar medium at distances of a few kpc from the sun. Observations at infrared and microwave wavelengths, where the bulk of the interstellar dust absorbs and radiates, have br...

  13. Lidar extinction measurement in the mid infrared

    Science.gov (United States)

    Mitev, Valentin; Babichenko, S.; Borelli, R.; Fiorani, L.; Grigorov, I.; Nuvoli, M.; Palucci, A.; Pistilli, M.; Puiu, Ad.; Rebane, Ott; Santoro, S.

    2014-11-01

    We present a lidar measurement of atmospheric extinction coefficient. The measurement is performed by inversion of the backscatter lidar signal at wavelengths 3'000nm and 3'500nm. The inversion of the backscatter lidar signal was performed with constant extinction-to-backscatter ration values of 104 and exponential factor 0.1.

  14. The atmospheric extinction of light

    International Nuclear Information System (INIS)

    Hughes, Stephen W; Powell, Sean; Carroll, Joshua; Cowley, Michael

    2016-01-01

    An experiment is described that enables students to understand the properties of atmospheric extinction due to Rayleigh scattering. The experiment requires the use of red, green and blue lasers attached to a travelling microscope or similar device. The laser beams are passed through an artificial atmosphere, made from milky water, at varying depths, before impinging on either a light meter or a photodiode integral to a Picotech Dr. DAQ ADC. A plot of measured spectral intensity verses depth reveals the contribution Rayleigh scattering has to the extinction coefficient. For the experiment with the light meter, the extinction coefficients for red, green and blue light in the milky sample of water were 0.27, 0.36 and 0.47 cm −1 respectively and 0.032, 0.037 and 0.092 cm −1 for the Picotech Dr. DAQ ADC. (paper)

  15. Study of MPLNET-Derived Aerosol Climatology over Kanpur, India, and Validation of CALIPSO Level 2 Version 3 Backscatter and Extinction Products

    Science.gov (United States)

    Misra, Amit; Tripathi, S. N.; Kaul, D. S.; Welton, Ellsworth J.

    2012-01-01

    The level 2 aerosol backscatter and extinction profiles from the NASA Micropulse Lidar Network (MPLNET) at Kanpur, India, have been studied from May 2009 to September 2010. Monthly averaged extinction profiles from MPLNET shows high extinction values near the surface during October March. Higher extinction values at altitudes of 24 km are observed from April to June, a period marked by frequent dust episodes. Version 3 level 2 Cloud Aerosol Lidar with Orthogonal Polarization (CALIOP) aerosol profile products have been compared with corresponding data from MPLNET over Kanpur for the above-mentioned period. Out of the available backscatter profiles, the16 profiles used in this study have time differences less than 3 h and distances less than 130 km. Among these profiles, four cases show good comparison above 400 m with R2 greater than 0.7. Comparison with AERONET data shows that the aerosol type is properly identified by the CALIOP algorithm. Cloud contamination is a possible source of error in the remaining cases of poor comparison. Another source of error is the improper backscatter-to-extinction ratio, which further affects the accuracy of extinction coefficient retrieval.

  16. Impossible Extinction

    Science.gov (United States)

    Cockell, Charles S.

    2003-03-01

    Every 225 million years the Earth, and all the life on it, completes one revolution around the Milky Way Galaxy. During this remarkable journey, life is influenced by calamitous changes. Comets and asteroids strike the surface of the Earth, stars explode, enormous volcanoes erupt, and, more recently, humans litter the planet with waste. Many animals and plants become extinct during the voyage, but humble microbes, simple creatures made of a single cell, survive this journey. This book takes a tour of the microbial world, from the coldest and deepest places on Earth to the hottest and highest, and witnesses some of the most catastrophic events that life can face. Impossible Extinction tells this remarkable story to the general reader by explaining how microbes have survived on Earth for over three billion years. Charles Cockell received his doctorate from the University of Oxford, and is currently a microbiologist with rhe Search for Extraterrestrial Intelligence Institute (SETI), based at the British Antarctic Survey in Cambridge, UK. His research focusses on astrobiology, life in the extremes and the human exploration of Mars. Cockell has been on expeditions to the Arctic, Antarctic, Mongolia, and in 1993 he piloted a modified insect-collecting ultra-light aircraft over the Indonesian rainforests. He is Chair of the Twenty-one Eleven Foundation for Exploration, a charity that supports expeditions that forge links between space exploration and environmentalism.

  17. Global minimum profile error (GMPE) - a least-squares-based approach for extracting macroscopic rate coefficients for complex gas-phase chemical reactions.

    Science.gov (United States)

    Duong, Minh V; Nguyen, Hieu T; Mai, Tam V-T; Huynh, Lam K

    2018-01-03

    Master equation/Rice-Ramsperger-Kassel-Marcus (ME/RRKM) has shown to be a powerful framework for modeling kinetic and dynamic behaviors of a complex gas-phase chemical system on a complicated multiple-species and multiple-channel potential energy surface (PES) for a wide range of temperatures and pressures. Derived from the ME time-resolved species profiles, the macroscopic or phenomenological rate coefficients are essential for many reaction engineering applications including those in combustion and atmospheric chemistry. Therefore, in this study, a least-squares-based approach named Global Minimum Profile Error (GMPE) was proposed and implemented in the MultiSpecies-MultiChannel (MSMC) code (Int. J. Chem. Kinet., 2015, 47, 564) to extract macroscopic rate coefficients for such a complicated system. The capability and limitations of the new approach were discussed in several well-defined test cases.

  18. The influence of friction coefficient and wheel/rail profiles on energy dissipation in the wheel/rail contact

    NARCIS (Netherlands)

    Idarraga Alarcon, G.A.; Burgelman, N.D.M.; Meza Meza, J.; Toro, A.; Li, Z.

    2015-01-01

    This work investigates the energy dissipation in a wheel/rail system through friction work modeling. In order to identify the effect of the friction coefficient on the energy dissipation in the wheel/rail contact, several simulations were performed using a 3D multibody model of a railway vehicle

  19. Improved profile fitting and quantification of uncertainty in experimental measurements of impurity transport coefficients using Gaussian process regression

    International Nuclear Information System (INIS)

    Chilenski, M.A.; Greenwald, M.; Howard, N.T.; White, A.E.; Rice, J.E.; Walk, J.R.; Marzouk, Y.

    2015-01-01

    The need to fit smooth temperature and density profiles to discrete observations is ubiquitous in plasma physics, but the prevailing techniques for this have many shortcomings that cast doubt on the statistical validity of the results. This issue is amplified in the context of validation of gyrokinetic transport models (Holland et al 2009 Phys. Plasmas 16 052301), where the strong sensitivity of the code outputs to input gradients means that inadequacies in the profile fitting technique can easily lead to an incorrect assessment of the degree of agreement with experimental measurements. In order to rectify the shortcomings of standard approaches to profile fitting, we have applied Gaussian process regression (GPR), a powerful non-parametric regression technique, to analyse an Alcator C-Mod L-mode discharge used for past gyrokinetic validation work (Howard et al 2012 Nucl. Fusion 52 063002). We show that the GPR techniques can reproduce the previous results while delivering more statistically rigorous fits and uncertainty estimates for both the value and the gradient of plasma profiles with an improved level of automation. We also discuss how the use of GPR can allow for dramatic increases in the rate of convergence of uncertainty propagation for any code that takes experimental profiles as inputs. The new GPR techniques for profile fitting and uncertainty propagation are quite useful and general, and we describe the steps to implementation in detail in this paper. These techniques have the potential to substantially improve the quality of uncertainty estimates on profile fits and the rate of convergence of uncertainty propagation, making them of great interest for wider use in fusion experiments and modelling efforts. (paper)

  20. An accuracy assessment of the CALIOP/CALIPSO version 2/version 3 daytime aerosol extinction product based on a detailed multi-sensor, multi-platform case study

    Directory of Open Access Journals (Sweden)

    M. Kacenelenbogen

    2011-04-01

    Full Text Available The Cloud Aerosol LIdar with Orthogonal Polarization (CALIOP, on board the CALIPSO platform, has measured profiles of total attenuated backscatter coefficient (level 1 products since June 2006. CALIOP's level 2 products, such as the aerosol backscatter and extinction coefficient profiles, are retrieved using a complex succession of automated algorithms. The goal of this study is to help identify potential shortcomings in the CALIOP version 2 level 2 aerosol extinction product and to illustrate some of the motivation for the changes that have been introduced in the next version of CALIOP data (version 3, released in June 2010. To help illustrate the potential factors contributing to the uncertainty of the CALIOP aerosol extinction retrieval, we focus on a one-day, multi-instrument, multiplatform comparison study during the CALIPSO and Twilight Zone (CATZ validation campaign on 4 August 2007. On that day, we observe a consistency in the Aerosol Optical Depth (AOD values recorded by four different instruments (i.e. space-borne MODerate Imaging Spectroradiometer, MODIS: 0.67 and POLarization and Directionality of Earth's Reflectances, POLDER: 0.58, airborne High Spectral Resolution Lidar, HSRL: 0.52 and ground-based AErosol RObotic NETwork, AERONET: 0.48 to 0.73 while CALIOP AOD is a factor of two lower (0.32 at 532 nm. This case study illustrates the following potential sources of uncertainty in the CALIOP AOD: (i CALIOP's low signal-to-noise ratio (SNR leading to the misclassification and/or lack of aerosol layer identification, especially close to the Earth's surface; (ii the cloud contamination of CALIOP version 2 aerosol backscatter and extinction profiles; (iii potentially erroneous assumptions of the aerosol extinction-to-backscatter ratio (Sa used in CALIOP's extinction retrievals; and (iv calibration coefficient biases in the CALIOP daytime attenuated backscatter coefficient profiles. The use of version 3 CALIOP extinction

  1. Modeling galactic extinction

    OpenAIRE

    Cecchi-Pestellini, C.; Mulas, G.; Casu, S.; Iatì, M. A.; Saija, R.; Cacciola, A.; Borghese, F.; Denti, P.

    2011-01-01

    We present a model for interstellar extinction dust, in which we assume a bimodal distribution of extinction carriers, a dispersion of core-mantle grains, supplemented by a collection of PAHs in free molecular form. We use state-of-the-art methods to calculate the extinction due to macroscopic dust particles, and the absorption cross-sections of PAHs in four different charge states. While successfull for most of observed Galactic extinction curves, in few cases the model cannot provide reliab...

  2. Modern examples of extinctions

    DEFF Research Database (Denmark)

    Lövei, Gabor L

    2013-01-01

    No species lives forever, and extinction is the ultimate fate of all living species. The fossil record indicates that a recent extinction wave affecting terrestrial vertebrates was parallel with the arrival of modern humans to areas formerly uninhabited by them. These modern instances of extinction...

  3. Local skin friction coefficients and boundary layer profiles obtained in flight from the XB-70-1 airplane at Mach numbers up to 2.5

    Science.gov (United States)

    Fisher, D. F.; Saltzman, E. J.

    1973-01-01

    Boundary-layer and local friction data for Mach numbers up to 2.5 and Reynolds numbers up to 3.6 x 10 to the 8th power were obtained in flight at three locations on the XB-70-1 airplane: the lower forward fuselage centerline (nose), the upper rear fuselage centerline, and the upper surface of the right wing. Local skin friction coefficients were derived at each location by using (1) a skin friction force balance, (2) a Preston probe, and (3) an adaptation of Clauser's method which derives skin friction from the rake velocity profile. These three techniques provided consistent results that agreed well with the von Karman-Schoenherr relationship for flow conditions that are quasi-two-dimensional. At the lower angles of attack, the nose-boom and flow-direction vanes are believed to have caused the momentum thickness at the nose to be larger than at the higher angles of attack. The boundary-layer data and local skin friction coefficients are tabulated. The wind-tunnel-model surface-pressure distribution ahead of the three locations and the flight surface-pressure distribution ahead of the wing location are included.

  4. Measuring Extinction with ALE

    Science.gov (United States)

    Zimmer, Peter C.; McGraw, J. T.; Gimmestad, G. G.; Roberts, D.; Stewart, J.; Smith, J.; Fitch, J.

    2007-12-01

    ALE (Astronomical LIDAR for Extinction) is deployed at the University of New Mexico's (UNM) Campus Observatory in Albuquerque, NM. It has begun a year-long testing phase prior deployment at McDonald Observatory in support of the CCD/Transit Instrument II (CTI-II). ALE is designed to produce a high-precision measurement of atmospheric absorption and scattering above the observatory site every ten minutes of every moderately clear night. LIDAR (LIght Detection And Ranging) is the VIS/UV/IR analog of radar, using a laser, telescope and time-gated photodetector instead of a radio transmitter, dish and receiver. In the case of ALE -- an elastic backscatter LIDAR -- 20ns-long, eye-safe laser pulses are launched 2500 times per second from a 0.32m transmitting telescope co-mounted with a 50mm short-range receiver on an alt-az mounted 0.67m long-range receiver. Photons from the laser pulse are scattered and absorbed as the pulse propagates through the atmosphere, a portion of which are scattered into the field of view of the short- and long-range receiver telescopes and detected by a photomultiplier. The properties of a given volume of atmosphere along the LIDAR path are inferred from both the altitude-resolved backscatter signal as well as the attenuation of backscatter signal from altitudes above it. We present ALE profiles from the commissioning phase and demonstrate some of the astronomically interesting atmospheric information that can be gleaned from these data, including, but not limited to, total line-of-sight extinction. This project is funded by NSF Grant 0421087.

  5. Determination of the profile of DO and its mass transferring coefficient in a biofilm reactor packed with semi-suspended bio-carriers.

    Science.gov (United States)

    Tang, Bing; Song, Haoliang; Bin, Liying; Huang, Shaosong; Zhang, Wenxiang; Fu, Fenglian; Zhao, Yiliang; Chen, Qianyu

    2017-10-01

    The work aims at illustrating the profile of DO and its mass transferring process in a biofilm reactor packed with a novel semi-suspended bio-carrier, and further revealing the main factors that influence the mass transferring coefficient of DO within the biofilm. Results showed that the biofilm was very easy to attach and grow on the semi-suspended bio-carrier, which obviously changed the DO profile inside and outside the biofilm. The semi-suspended bio-carrier caused three different mass transfer zones occurring in the bioreactor, including the zones of bulk solution, boundary layer and biofilm, in which, the boundary layer zone had an obvious higher mass transfer resistance. Increasing the aeration rate might improve the hydrodynamic conditions in the bioreactor and accelerate the mass transfer of DO, but it also detached the biofilm from the surface of bio-carrier, which reduced the consumption of DO, and accordingly, decreased the DO gradient in the bioreactor. Copyright © 2017 Elsevier Ltd. All rights reserved.

  6. Bimodal extinction without cross-modal extinction.

    OpenAIRE

    Inhoff, A W; Rafal, R D; Posner, M J

    1992-01-01

    Three patients with unilateral neurological injury were clinically examined. All showed consistent unilateral extinction in the tactile and visual modalities on simultaneous intramodal stimulation. There was virtually no evidence for cross-modal extinction, however, so that contralateral stimulation of one modality would have extinguished perception of ipsilateral stimuli in the other modality. It is concluded that the attentional system controlling the encoding of tactile and visual stimuli ...

  7. Spaceborne profiling of atmospheric temperature and particle extinction with pure rotational Raman lidar and of relative humidity in combination with differential absorption lidar: performance simulations

    International Nuclear Information System (INIS)

    Di Girolamo, Paolo; Behrendt, Andreas; Wulfmeyer, Volker

    2006-01-01

    The performance of a spaceborne temperature lidar based on the pure rotational Raman (RR) technique in the UV has been simulated. Results show that such a system deployed onboard a low-Earth-orbit satellite would provide global-scale clear-sky temperature measurements in the troposphere and lower stratosphere with precisions that satisfy World Meteorological Organization (WMO) threshold observational requirements for numerical weather prediction and climate research applications. Furthermore, nighttime temperature measurements would still be within the WMO threshold observational requirements in the presence of several cloud structures. The performance of aerosol extinction measurements from space, which can be carried out simultaneously with temperature measurements by RR lidar, is also assessed. Furthermore, we discuss simulations of relative humidity measurements from space obtained from RR temperature measurements and water-vapor data measured with the differential absorption lidar (DIAL) technique

  8. Precision Photometric Extinction Corrections from Direct Atmospheric Measurements

    Science.gov (United States)

    McGraw, John T.; Zimmer, P.; Linford, J.; Simon, T.; Measurement Astrophysics Research Group

    2009-01-01

    For decades astronomical extinction corrections have been accomplished using nightly mean extinction coefficients derived from Langley plots measured with the same telescope used for photometry. Because this technique results in lost time on program fields, observers only grudgingly made sporadic extinction measurements. Occasionally extinction corrections are not measured nightly but are made using tabulated mean monthly or even quarterly extinction coefficients. Any observer of the sky knows that Earth's atmosphere is an ever-changing fluid in which is embedded extinction sources ranging from Rayleigh (molecular) scattering to aerosol, smoke and dust scattering and absorption, to "just plain cloudy.” Our eyes also tell us that the type, direction and degree of extinction changes on time scales of minutes or less - typically shorter than many astronomical observations. Thus, we should expect that atmospheric extinction can change significantly during a single observation. Mean extinction coefficients might be well-defined nightly means, but those means have high variance because they do not accurately record the wavelength-, time-, and angle-dependent extinction actually affecting each observation. Our research group is implementing lidar measurements made in the direction of observation with one minute cadence, from which the absolute monochromatic extinction can be measured. Simultaneous spectrophotometry of nearby bright standard stars allows derivation and MODTRAN modeling atmospheric transmission as a function of wavelength for the atmosphere through which an observation is made. Application of this technique is demonstrated. Accurate real-time extinction measurements are an enabling factor for sub-1% photometry. This research is supported by NSF Grant 0421087 and AFRL Grant #FA9451-04-2-0355.

  9. Extinction with multiple excitors

    OpenAIRE

    McConnell, Bridget L.; Miguez, Gonzalo; Miller, Ralph R.

    2013-01-01

    Four conditioned suppression experiments with rats, using an ABC renewal design, investigated the effects of compounding the target conditioned excitor with additional, nontarget conditioned excitors during extinction. Experiment 1 showed stronger extinction, as evidenced by less renewal, when the target excitor was extinguished in compound with a second excitor, relative to when it was extinguished with associatively neutral stimuli. Critically, this deepened extinction effect was attenuated...

  10. On the trap of extinction and its elimination

    International Nuclear Information System (INIS)

    Vitanov, Nikolay K.; Dimitrova, Zlatinka I.; Kantz, Holger

    2006-01-01

    We investigate the dynamics of a system of three interacting populations in presence of extinction and substitution: each population whose number of individuals drops under some threshold value becomes extinct, and it is substituted by another population with different fitness and different coefficients of interaction with the other populations. We study the influence of extinction on the system states, which in the absence of extinction can be fixed points, limit cycles or chaotic attractors of Shilnikov kind. The extinction can destabilize each of these states. We observe two possible kinds of evolution in the destabilized system: (i) it can remain forever in the trap of extinction, i.e., the extinctions and substitutions of populations continue for indefinitely long time or (ii) it can avoid the trap of extinction by means of the substitution, i.e., the fitness and the coefficients of the interactions between the species move the system attractor away from the zone of the threshold values, the extinction stops, and the system settles on a new attractor. The obtained results are discussed from the point of view of products competing for the preference of buyers that can change their opinion

  11. End Ordovician extinctions

    DEFF Research Database (Denmark)

    Harper, David A. T.; Hammarlund, Emma; Rasmussen, Christian M. Ø.

    2014-01-01

    -global anoxia associated with a marked transgression during the Late Hirnantian. Most recently, however, new drivers for the extinctions have been proposed, including widespread euxinia together with habitat destruction caused by plate tectonic movements, suggesting that the end Ordovician mass extinctions were...

  12. Extinction of NGC 7027

    International Nuclear Information System (INIS)

    Seaton, M.J.

    1979-01-01

    Emission intensities of recombination lines in hydrogenic spectra are known accurately relative to intensities in the free-free radio continuum. For NGC 7027 intensities have been measured for the radio continuum and for H I and He II lines in the wavelength range from lambda = 2.17 μm to lambda = 1640 A: comparison with the calculated emission intensities gives the extinction. Determinations of the standard interstellar extinction function are critically discussed. The extinction deduced for the total radiation from NGC 7027 has a dependence on wavelength for 6563 A >= lambda >= 1640 A which is in excellent agreement with the adopted standard results, but there are some anomalies for longer wavelengths and for the ratio of total to selective extinction. These can be explained using a model which allows for a local contribution to the extinction which is variable over the surface of the nebula. (author)

  13. Interstellar extinction correlations

    International Nuclear Information System (INIS)

    Jones, A.P.; Williams, D.A.; Duley, W.W.

    1987-01-01

    A recently proposed model for interstellar grains in which the extinction arises from small silicate cores with mantles of hydrogenated amorphous carbon (HAC or α-C:H), and large, but thinly coated, silicate grains can successfully explain many of the observed properties of interstellar dust. The small silicate cores give rise to the 2200 A extinction feature. The extinction in the visual is produced by the large silicates and the HAC mantles on the small cores, whilst the far UV extinction arises in the HAC mantles with a small contribution form the silicate grains. The grain model requires that the silicate material is the more resilient component and that variations in the observed extinction from region to region are due to the nature and depletion of the carbon in the HAC mantles. (author)

  14. Visible and ultraviolet (800--130 nm) extinction of vapor-condensed silicate, carbon, and silicon carbide smokes and the interstellar extinction curve

    International Nuclear Information System (INIS)

    Stephens, J.R.

    1980-01-01

    The extinction curves from 800 to 130 nm (1.25--7.7 μm -1 ) of amorphous silicate smokes nominally of olivine and pyroxene composition, carbon smokes, and crystalline SiC smokes are presented. The SiC smoke occurred in the low-temperature (β) cubic structural form. The mean grain radius ranged from 5 to 13 nm. The extinction profiles of the amorphous olivine smokes were similar in the ultraviolet to the measured extinction curves of crystalline olivine of nearly the same grain size. The SiC smoke showed an absorption edge which occurred at significantly longer wavelengths than the calculated extinction profile of the hexagonal SiC form previously used to calculate the interstellar extinction profile. Neither SiC nor amorphous silicates show an extinction band similar to the observed 6.6 μm -1 astronomical extinction band

  15. Extinction and the fossil record

    Science.gov (United States)

    Sepkoski, J. J. Jr; Sepkoski JJ, ,. J. r. (Principal Investigator)

    1994-01-01

    The author examines evidence of mass extinctions in the fossil record and searches for reasons for such large extinctions. Five major mass extinctions eliminated at least 40 percent of animal genera in the oceans and from 65 to 95 percent of ocean species. Questions include the occurrence of gradual or catastrophic extinctions, causes, environment, the capacity of a perturbation to cause extinctions each time it happens, and the possibility and identification of complex events leading to a mass extinction.

  16. Is IR going extinct?

    Science.gov (United States)

    Mitchell, Audra

    2016-01-01

    A global extinction crisis may threaten the survival of most existing life forms. Influential discourses of ‘existential risk’ suggest that human extinction is a real possibility, while several decades of evidence from conservation biology suggests that the Earth may be entering a ‘sixth mass extinction event’. These conditions threaten the possibilities of survival and security that are central to most branches of International Relations. However, this discipline lacks a framework for addressing (mass) extinction. From notions of ‘nuclear winter’ and ‘omnicide’ to contemporary discourses on catastrophe, International Relations thinking has treated extinction as a superlative of death. This is a profound category mistake: extinction needs to be understood not in the ontic terms of life and death, but rather in the ontological context of be(com)ing and negation. Drawing on the work of theorists of the ‘inhuman’ such as Quentin Meillassoux, Claire Colebrook, Ray Brassier, Jean-Francois Lyotard and Nigel Clark, this article provides a pathway for thinking beyond existing horizons of survival and imagines a profound transformation of International Relations. Specifically, it outlines a mode of cosmopolitics that responds to the element of the inhuman and the forces of extinction. Rather than capitulating to narratives of tragedy, this cosmopolitics would make it possible to think beyond the restrictions of existing norms of ‘humanity’ to embrace an ethics of gratitude and to welcome the possibility of new worlds, even in the face of finitude.

  17. Temporal Dynamics of Recovery from Extinction Shortly after Extinction Acquisition

    Science.gov (United States)

    Archbold, Georgina E.; Dobbek, Nick; Nader, Karim

    2013-01-01

    Evidence suggests that extinction is new learning. Memory acquisition involves both short-term memory (STM) and long-term memory (LTM) components; however, few studies have examined early phases of extinction retention. Retention of auditory fear extinction was examined at various time points. Shortly (1-4 h) after extinction acquisition…

  18. Mass extinction efficiency and extinction hygroscopicity of ambient PM2.5 in urban China.

    Science.gov (United States)

    Cheng, Zhen; Ma, Xin; He, Yujie; Jiang, Jingkun; Wang, Xiaoliang; Wang, Yungang; Sheng, Li; Hu, Jiangkai; Yan, Naiqiang

    2017-07-01

    The ambient PM 2.5 pollution problem in China has drawn substantial international attentions. The mass extinction efficiency (MEE) and hygroscopicity factor (f(RH)) of PM 2.5 can be readily applied to study the impacts on atmospheric visibility and climate. The few previous investigations in China only reported results from pilot studies and are lack of spatial representativeness. In this study, hourly average ambient PM 2.5 mass concentration, relative humidity, and atmospheric visibility data from China national air quality and meteorological monitoring networks were retrieved and analyzed. It includes 24 major Chinese cities from nine city-clusters with the period of October 2013 to September 2014. Annual average extinction coefficient in urban China was 759.3±258.3Mm -1 , mainly caused by dry PM 2.5 (305.8.2±131.0Mm -1 ) and its hygroscopicity (414.6±188.1Mm -1 ). High extinction coefficient values were resulted from both high ambient PM 2.5 concentration (68.5±21.7µg/m 3 ) and high relative humidity (69.7±8.6%). The PM 2.5 mass extinction efficiency varied from 2.87 to 6.64m 2 /g with an average of 4.40±0.84m 2 /g. The average extinction hygroscopic factor f(RH=80%) was 2.63±0.45. The levels of PM 2.5 mass extinction efficiency and hygroscopic factor in China were in comparable range with those found in developed countries in spite of the significant diversities among all 24 cities. Our findings help to establish quantitative relationship between ambient extinction coefficient (visual range) and PM 2.5 & relative humidity. It will reduce the uncertainty of extinction coefficient estimation of ambient PM 2.5 in urban China which is essential for the research of haze pollution and climate radiative forcing. Copyright © 2017 Elsevier Inc. All rights reserved.

  19. Profiles

    International Nuclear Information System (INIS)

    2004-01-01

    Profiles is a synthetic overview of more than 100 national energy markets in the world, providing insightful facts and key energy statistics. A Profile is structured around 6 main items and completed by key statistics: Ministries, public agencies, energy policy are concerned; main companies in the oil, gas, electricity and coal sectors, status, shareholders; reserve, production, imports and exports, electricity and refining capacities; deregulation of prices, subsidies, taxes; consumption trends by sector, energy market shares; main energy projects, production and consumption prospects. Statistical Profiles are present in about 3 pages the main data and indicators on oil, gas, coal and electricity. (A.L.B.)

  20. Stress and Fear Extinction

    Science.gov (United States)

    Maren, Stephen; Holmes, Andrew

    2016-01-01

    Stress has a critical role in the development and expression of many psychiatric disorders, and is a defining feature of posttraumatic stress disorder (PTSD). Stress also limits the efficacy of behavioral therapies aimed at limiting pathological fear, such as exposure therapy. Here we examine emerging evidence that stress impairs recovery from trauma by impairing fear extinction, a form of learning thought to underlie the suppression of trauma-related fear memories. We describe the major structural and functional abnormalities in brain regions that are particularly vulnerable to stress, including the amygdala, prefrontal cortex, and hippocampus, which may underlie stress-induced impairments in extinction. We also discuss some of the stress-induced neurochemical and molecular alterations in these brain regions that are associated with extinction deficits, and the potential for targeting these changes to prevent or reverse impaired extinction. A better understanding of the neurobiological basis of stress effects on extinction promises to yield novel approaches to improving therapeutic outcomes for PTSD and other anxiety and trauma-related disorders. PMID:26105142

  1. Biological Extinction in Earth History

    Science.gov (United States)

    Raup, David M.

    1986-03-01

    Virtually all plant and animal species that have ever lived on the earth are extinct. For this reason alone, extinction must play an important role in the evolution of life. The five largest mass extinctions of the past 600 million years are of greatest interest, but there is also a spectrum of smaller events, many of which indicate biological systems in profound stress. Extinction may be episodic at all scales, with relatively long periods of stability alternating with short-lived extinction events. Most extinction episodes are biologically selective, and further analysis of the victims and survivors offers the greatest chance of deducing the proximal causes of extinction. A drop in sea level and climatic change are most frequently invoked to explain mass extinctions, but new theories of collisions with extraterrestrial bodies are gaining favor. Extinction may be constructive in a Darwinian sense or it may only perturb the system by eliminating those organisms that happen to be susceptible to geologically rare stresses.

  2. Biological extinction in earth history

    Science.gov (United States)

    Raup, D. M.

    1986-01-01

    Virtually all plant and animal species that have ever lived on the earth are extinct. For this reason alone, extinction must play an important role in the evolution of life. The five largest mass extinctions of the past 600 million years are of greatest interest, but there is also a spectrum of smaller events, many of which indicate biological systems in profound stress. Extinction may be episodic at all scales, with relatively long periods of stability alternating with short-lived extinction events. Most extinction episodes are biologically selective, and further analysis of the victims and survivors offers the greatest chance of deducing the proximal causes of extinction. A drop in sea level and climatic change are most frequently invoked to explain mass extinctions, but new theories of collisions with extraterrestrial bodies are gaining favor. Extinction may be constructive in a Darwinian sense or it may only perturb the system by eliminating those organisms that happen to be susceptible to geologically rare stresses.

  3. Interstellar dust and extinction

    International Nuclear Information System (INIS)

    Mathis, J.S.

    1990-01-01

    It is noted that the term interstellar dust refers to materials with rather different properties, and that the mean extinction law of Seaton (1979) or Savage and Mathis (1979) should be replaced by the expression given by Cardelli et al. (1989), using the appropriate value of total-to-selective extinction. The older laws were appropriate for the diffuse ISM but dust in clouds differs dramatically in its extinction law. Dust is heavily processed while in the ISM by being included within clouds and cycled back into the diffuse ISM many times during its lifetime. Hence, grains probably reflect only a trace of their origin, although meteoritic inclusions with isotopic anomalies demonstrate that some tiny particles survive intact from a supernova origin to the present. 186 refs

  4. Switchgrass leaf area index and light extinction coefficients

    Science.gov (United States)

    Biomass production simulation modeling for plant species is often dependent upon accurate simulation or measurement of canopy light interception and radiation use efficiency. With the recent interest in converting large tracts of land to biofuel species cropping, modeling vegetative yield with grea...

  5. Extinction of sodium fires

    International Nuclear Information System (INIS)

    Malet, J.C.; Spagna, F.

    1989-01-01

    This paper presents how, starting from a knowledge of sodium ignition and burning, principles for extinction (smothering catch trays, leak recuperation systems, powders) can be developed. These techniques applied in Superphenix 1 and PEC reactors have been tested in the ESMERALDA experimental program which is a joint French/Italian project. (author)

  6. MODELING GALACTIC EXTINCTION WITH DUST AND 'REAL' POLYCYCLIC AROMATIC HYDROCARBONS

    International Nuclear Information System (INIS)

    Mulas, Giacomo; Casu, Silvia; Cecchi-Pestellini, Cesare; Zonca, Alberto

    2013-01-01

    We investigate the remarkable apparent variety of galactic extinction curves by modeling extinction profiles with core-mantle grains and a collection of single polycyclic aromatic hydrocarbons. Our aim is to translate a synthetic description of dust into physically well-grounded building blocks through the analysis of a statistically relevant sample of different extinction curves. All different flavors of observed extinction curves, ranging from the average galactic extinction curve to virtually 'bumpless' profiles, can be described by the present model. We prove that a mixture of a relatively small number (54 species in 4 charge states each) of polycyclic aromatic hydrocarbons can reproduce the features of the extinction curve in the ultraviolet, dismissing an old objection to the contribution of polycyclic aromatic hydrocarbons to the interstellar extinction curve. Despite the large number of free parameters (at most the 54 × 4 column densities of each species in each ionization state included in the molecular ensemble plus the 9 parameters defining the physical properties of classical particles), we can strongly constrain some physically relevant properties such as the total number of C atoms in all species and the mean charge of the mixture. Such properties are found to be largely independent of the adopted dust model whose variation provides effects that are orthogonal to those brought about by the molecular component. Finally, the fitting procedure, together with some physical sense, suggests (but does not require) the presence of an additional component of chemically different very small carbonaceous grains.

  7. Extinction-to-Backscatter Ratios of Saharan Dust Layers Derived from In-Situ Measurements and CALIPSO Overflights During NAMMA

    Science.gov (United States)

    Omar, Ali H.; Liu, Zhaoyan; Vaughan, Mark A.; Hu, Yongxiang; Ismail, Syed; Powell, Kathleen A.; Winker, David M.; Trepte, Charles R.; Anderson, Bruce E.

    2010-01-01

    We determine the aerosol extinction-to-backscatter (Sa) ratios of dust using airborne in-situ measurements of microphysical properties, and CALIPSO observations during the NASA African Monsoon Multidisciplinary Analyses (NAMMA). The NAMMA field experiment was conducted from Sal, Cape Verde during Aug-Sept 2006. Using CALIPSO measurements of the attenuated backscatter of lofted Saharan dust layers, we apply the transmittance technique to estimate dust Sa ratios at 532 nm and a 2-color method to determine the corresponding 1064 nm Sa. Using this method, we found dust Sa ratios of 39.8 plus or minus 1.4 sr and 51.8 plus or minus 3.6 sr at 532 nm and 1064 nm, respectively. Secondly, Sa ratios at both wavelengths is independently calculated using size distributions measured aboard the NASA DC-8 and estimates of Saharan dust complex refractive indices applied in a T-Matrix scheme. We found Sa ratios of 39.1 plus or minus 3.5 sr and 50.0 plus or minus 4 sr at 532 nm and 1064 nm, respectively, using the T-Matrix calculations applied to measured size spectra. Finally, in situ measurements of the total scattering (550 nm) and absorption coefficients (532 nm) are used to generate an extinction profile that is used to constrain the CALIPSO 532 nm extinction profile.

  8. Metapopulation extinction risk: dispersal's duplicity.

    Science.gov (United States)

    Higgins, Kevin

    2009-09-01

    Metapopulation extinction risk is the probability that all local populations are simultaneously extinct during a fixed time frame. Dispersal may reduce a metapopulation's extinction risk by raising its average per-capita growth rate. By contrast, dispersal may raise a metapopulation's extinction risk by reducing its average population density. Which effect prevails is controlled by habitat fragmentation. Dispersal in mildly fragmented habitat reduces a metapopulation's extinction risk by raising its average per-capita growth rate without causing any appreciable drop in its average population density. By contrast, dispersal in severely fragmented habitat raises a metapopulation's extinction risk because the rise in its average per-capita growth rate is more than offset by the decline in its average population density. The metapopulation model used here shows several other interesting phenomena. Dispersal in sufficiently fragmented habitat reduces a metapopulation's extinction risk to that of a constant environment. Dispersal between habitat fragments reduces a metapopulation's extinction risk insofar as local environments are asynchronous. Grouped dispersal raises the effective habitat fragmentation level. Dispersal search barriers raise metapopulation extinction risk. Nonuniform dispersal may reduce the effective fraction of suitable habitat fragments below the extinction threshold. Nonuniform dispersal may make demographic stochasticity a more potent metapopulation extinction force than environmental stochasticity.

  9. Galactic dust and extinction

    International Nuclear Information System (INIS)

    Lyngaa, G.

    1979-01-01

    The ratio R between visual extinction and colour excess, is slightly larger than 3 and does not vary much throughout our part of the Galaxy. The distribution of dust in the galactic plane shows, on the large scale, a gradient with higher colour excesses towards l=50 0 than towards l=230 0 . On the smaller scale, much of the dust responsible for extinction is situated in clouds which tend to group together. The correlation between positions of interstellar dust clouds and positions of spiral tracers seems rather poor in our Galaxy. However, concentrated dark clouds as well as extended regions of dust show an inclined distribution similar to the Gould belt of bright stars. (Auth.)

  10. Analysis of extinction properties as a function of relative humidity using a κ-EC-Mie model in Nanjing

    Directory of Open Access Journals (Sweden)

    Z. Zhang

    2017-03-01

    coefficient in Nanjing was due to particles in the 0.2–1.0 µm size range. Under dry conditions, the higher mass fraction of particles in the 0.2–1.0 µm size range caused the higher extinction coefficient. An increase in RH led to a significant increase in the extinction coefficient, although the increases differed among the different size segments. For λ = 550 nm, the extinction coefficient from the 0.01–0.2, 0.2–0.5, and 1.0–2.0 µm size ranges increased significantly with the increase in RH, whereas the extinction contributions from the 0.5–1.0 and 2.0–10.0 µm size ranges to the extinction coefficient decreased slightly.

  11. The effect of experimental resolution on crystal reflectivity and secondary extinction in neutron diffraction

    DEFF Research Database (Denmark)

    Dietrich, O.W.; Als-Nielsen, Jens Aage

    1965-01-01

    The reflectivity for neutrons of a plane slab crystal is calculated in the transmission case when the crystal is placed between two Seller collimators. The calculations indicate that the crystal reflectivity, as well as the secondary extinction coefficient, depends signicantly on the angular...... resolution of the collimators. Curves are given for the extinction of the crystal with different crystal and collimator parameters....

  12. Measurement of mass attenuation coefficients of Rhizophora spp. binderless particleboards in the 16.59-25.26 keV photon energy range and their density profile using x-ray computed tomography

    Energy Technology Data Exchange (ETDEWEB)

    Marashdeh, M.W., E-mail: mwmarashdeh@yahoo.com [School of Physics, Universiti Sains Malaysia, 11800 USM, Penang (Malaysia); Bauk, S. [Physics Section, P.P.P. Jarak Jauh, Universiti Sains Malaysia, 11800 USM, Penang (Malaysia); Tajuddin, A.A. [School of Physics, Universiti Sains Malaysia, 11800 USM, Penang (Malaysia); Hashim, R. [Division of Bio-resource, Paper and Coatings Technology, School of Industrial Technology, Universiti Sains Malaysia, 11800 USM, Penang (Malaysia)

    2012-04-15

    The mass attenuation coefficients of Rhizophora spp. binderless particleboard with four different particle sizes (samples A, B, C and D) and natural raw Rhizophora spp. wood (sample E) were determined using single-beam photon transmission in the energy range between 16.59 and 25.26 keV. This was done by determining the attenuation of K{sub {alpha}1} X-ray fluorescent (XRF) photons from niobium, molybdenum, palladium, silver and tin targets. The results were compared with theoretical values of young-age breast (Breast 1) and water calculated using a XCOM computer program. It was found that the mass attenuation coefficient of Rhizophora spp. binderless particleboards to be close to the calculated XCOM values in water than natural Rhizophora spp. wood. Computed tomography (CT) scans were then used to determine the density profile of the samples. The CT scan results showed that the Rhizophora spp. binderless particleboard has uniform density compared to natural Rhizophora spp. wood. In general, the differences in the variability of the profile density decrease as the particle size of the pellet samples decreases. - Highlights: Black-Right-Pointing-Pointer Mass attenuation coefficients were determined by X-ray fluorescent photons. Black-Right-Pointing-Pointer Sample with smaller particle size found very close to calculated water XCOM. Black-Right-Pointing-Pointer X-ray computed tomography scanner was used to investigate the density distribution. Black-Right-Pointing-Pointer The density distribution profile is improved with the decrease in the particle size. Black-Right-Pointing-Pointer Rhizophora spp. binderless particleboard could be used as phantom material.

  13. Light extinction in metallic powder beds: Correlation with powder structure

    International Nuclear Information System (INIS)

    Rombouts, M.; Froyen, L.; Gusarov, A.V.; Bentefour, E.H.; Glorieux, C.

    2005-01-01

    A theoretical correlation between the effective extinction coefficient, the specific surface area, and the chord length distribution of powder beds is verified experimentally. The investigated powder beds consist of metallic particles of several tens of microns. The effective extinction coefficients are measured by a light-transmission technique at a wavelength of 540 nm. The powder structure is characterized by a quantitative image analysis of powder bed cross sections resulting in two-point correlation functions and chord length distributions. The specific surface area of the powders is estimated by laser-diffraction particle-size analysis and by the two-point correlation function. The theoretically predicted tendency of increasing extinction coefficient with specific surface area per unit void volume is confirmed by the experiments. However, a significant quantitative discrepancy is found for several powders. No clear correlation of the extinction coefficient with the powder material and particle size, and morphology is revealed, which is in line with the assumption of geometrical optics

  14. Extinction of radiant energy by large atmospheric crystals with different shapes

    International Nuclear Information System (INIS)

    Shefer, Olga

    2016-01-01

    The calculated results of extinction characteristics of visible and infrared radiation for large semi-transparent crystals are obtained by hybrid technique, which is a combination of the geometric optics method and the physical optics method. Energy and polarization characteristics of the radiation extinction in terms of the elements of the extinction matrix for individual large crystals and ensemble of crystals are discussed. Influences of particle shapes, aspect ratios, parameters of size distribution, complex refractive index, orientation of crystals, wavelength, and the polarization state of an incident radiation on the extinction are illustrated. It is shown that the most expressive and stable features of energy and polarization characteristics of the extinction are observed in the midinfrared region, despite the fact that the ice particles significantly absorb the radiant energy of this spectrum. It is demonstrated that the polarized extinction characteristics can reach several tens of percent at IR wavelengths. For the large crystals, the conditions of occurrence of the spectral behavior of the extinction coefficient in the visible, near-IR, and mid-IR wavelength ranges are determined. - Highlights: • Method of physical optics is used at coherent sum of diffracted and refracted fields. • The extinction characteristics in terms of elements of extinction matrix are obtained. • Influence of shapes and sizes of large particles on the extinction is evaluated. • Conditions of occurrence of extinction features are determined.

  15. Cavity Attenuated Phase Shift (CAPS) Method for Airborne Aerosol Light Extinction Measurement: Instrument Validation and First Results from Field Deployment

    Science.gov (United States)

    Petzold, A.; Perim de Faria, J.; Berg, M.; Bundke, U.; Freedman, A.

    2015-12-01

    Monitoring the direct impact of aerosol particles on climate requires the continuous measurement of aerosol optical parameters like the aerosol extinction coefficient on a regular basis. Remote sensing and ground-based networks are well in place (e.g., AERONET, ACTRIS), whereas the regular in situ measurement of vertical profiles of atmospheric aerosol optical properties remains still an important challenge in quantifying climate change. The European Research Infrastructure IAGOS (In-service Aircraft for a Global Observing System; www.iagos.org) responds to the increasing requests for long-term, routine in situ observational data by using commercial passenger aircraft as measurement platform. However, scientific instrumentation for the measurement of atmospheric constituents requires major modifications before being deployable aboard in-service passenger aircraft. Recently, a compact and robust family of optical instruments based on the cavity attenuated phase shift (CAPS) technique has become available for measuring aerosol light extinction. While this technique was successfully deployed for ground-based atmospheric measurements under various conditions, its suitability for operation aboard aircraft in the free and upper free troposphere still has to be demonstrated. In this work, the modifications of a CAPS PMex instrument for measuring aerosol light extinction on aircraft, the results from subsequent laboratory tests for evaluating the modified instrument prototype, and first results from a field deployment aboard a research aircraft will be covered. In laboratory studies, the instrument showed excellent agreement (deviation CAPS PMex instrument response within 10% deviation. During the field deployment, aerosol extinction coefficients and associated aerosol size distributions have been measured and will be presented as comparison studies between measured and calculated data.

  16. Modelling interstellar extinction: Pt. 1

    International Nuclear Information System (INIS)

    Jones, A.P.

    1988-01-01

    Several methods of calculating the extinction of porous silicate grains are discussed, these include effective medium theories and hollow spherical shells. Porous silicate grains are shown to produce enhanced infrared, ultraviolet and far-ultraviolet extinction and this effect can be used to reduce the abundance of carbon required to match the average interstellar extinction, however, matching the visual extinction is rather more problematical. We have shown that the enhanced extinction at long and short wavelengths have different origins, and have explained why the visual extinction is little affected by porosity. The implications of porous grains in the interstellar medium are discussed with particular reference to surface chemistry, the polarization of starlight, and their dynamical evolution. (author)

  17. Extinction Events Can Accelerate Evolution

    DEFF Research Database (Denmark)

    Lehman, Joel; Miikkulainen, Risto

    2015-01-01

    Extinction events impact the trajectory of biological evolution significantly. They are often viewed as upheavals to the evolutionary process. In contrast, this paper supports the hypothesis that although they are unpredictably destructive, extinction events may in the long term accelerate...... evolution by increasing evolvability. In particular, if extinction events extinguish indiscriminately many ways of life, indirectly they may select for the ability to expand rapidly through vacated niches. Lineages with such an ability are more likely to persist through multiple extinctions. Lending...... computational support for this hypothesis, this paper shows how increased evolvability will result from simulated extinction events in two computational models of evolved behavior. The conclusion is that although they are destructive in the short term, extinction events may make evolution more prolific...

  18. Rescuing Ecosystems from Extinction Cascades

    Science.gov (United States)

    Sahasrabudhe, Sagar; Motter, Adilson

    2010-03-01

    Food web perturbations stemming from climate change, overexploitation, invasive species, and natural disasters often cause an initial loss of species that results in a cascade of secondary extinctions. Using a predictive modeling framework, here we will present a systematic network-based approach to reduce the number of secondary extinctions. We will show that the extinction of one species can often be compensated by the concurrent removal of a second specific species, which is a counter-intuitive effect not previously tested in complex food webs. These compensatory perturbations frequently involve long-range interactions that are not a priori evident from local predator-prey relationships. Strikingly, in numerous cases even the early removal of a species that would eventually be extinct by the cascade is found to significantly reduce the number of cascading extinctions. Other nondestructive interventions based on partial removals and growth suppression and/or mortality increase are shown to sometimes prevent all secondary extinctions.

  19. Extinction correction in white X-ray and neutron diffraction

    International Nuclear Information System (INIS)

    Tomiyoshi, S.; Yamada, M.; Watanabe, H.

    1980-01-01

    Extinction effects in white-beam X-ray and neutron diffraction are considered. In white-beam diffraction, a small deviation of the wavelength from the Bragg condition Δlambda is a variable which represents the line profile of the diffraction peaks, so that by using the new parameter Δlambda the theory is converted to one in white-beam diffraction. It is shown that for a convex crystal, primary extinction agrees with the results calculated already for monochromatic diffraction. The same relation is shown to hold in secondary extinction. It is concluded that extinction theory derived for monochromatic diffraction is applicable without any modification in white-beam diffraction. (Auth.)

  20. Acoustic integrated extinction

    OpenAIRE

    Norris, Andrew N.

    2015-01-01

    The integrated extinction (IE) is defined as the integral of the scattering cross section as a function of wavelength. Sohl et al. (2007 J. Acoust. Soc. Am. 122, 3206–3210. (doi:10.1121/1.2801546)) derived an IE expression for acoustic scattering that is causal, i.e. the scattered wavefront in the forward direction arrives later than the incident plane wave in the background medium. The IE formula was based on electromagnetic results, for which scattering is causal by default. Here, we der...

  1. Mass extinctions of Earth

    International Nuclear Information System (INIS)

    Fernandez, B.; Fernandez, P.; Pereira, B.

    2015-01-01

    Throughout the history of our planet, there have been global phenomena which have led to the disappearance of a large number of species: It is what is known as mass or massive extinctions. This article will make a tour of these large events, from the most remote antiquity to the present day. Today we find ourselves immersed in a process unprecedented since we are eyewitnesses and, more important still, an active part in the decision-making process to try to mitigate their effects. (Author)

  2. Easy to use program “Simkine3” for simulating kinetic profiles of multi-step chemical Systems and optimisation of predictable rate coefficients therein

    Directory of Open Access Journals (Sweden)

    S.B. Jonnalagadda

    2012-08-01

    Full Text Available ‘Simkine3’, a Delphi based software is developed to simulate the kinetic schemes of complex reaction mechanisms involving multiple sequential and competitive elementary steps for homogeneous and heterogeneous chemical reactions. Simkine3 is designed to translate the user specified mechanism into chemical first-order differential equations (ODEs and optimise the estimated rate constants in such a way that simulated curves match the experimental kinetic profiles. TLSoda which uses backward differentiation method is utilised to solve resulting ODEs and Downhill Simplex method is used to optimise the estimated rate constants in a robotic way. An online help file is developed using HelpScrible Demo to guide the users of Simkine3. The versatility of the software is demonstrated by simulating the complex reaction between methylene violet and acidic bromate, a reaction which exhibits complex nonlinear kinetics. The new software is validated after testing it on a 19-step intricate mechanism involving 15 different species. The kinetic profiles of multiple simulated curves, illustrating the effect of initial concentrations of bromate, and bromide were matched with the corresponding experimental curves.DOI: http://dx.doi.org/10.4314/bcse.v26i2.10

  3. Mass extinctions and supernova explosions

    OpenAIRE

    Korschinek, Gunther

    2016-01-01

    A nearby supernova (SN) explosion could have negatively influenced life on Earth, maybe even been responsible for mass extinctions. Mass extinction poses a significant extinction of numerous species on Earth, as recorded in the paleontologic, paleoclimatic, and geological record of our planet. Depending on the distance between the Sun and the SN, different types of threats have to be considered, such as ozone depletion on Earth, causing increased exposure to the Sun's ultraviolet radiation, o...

  4. Extinction of H II regions

    International Nuclear Information System (INIS)

    Israel, F.P.; Kennicutt, R.C.

    1980-01-01

    Visual extinction of H II regions in nine nearby galaxies as derived from the ratio of the radio continuum emission to H-alpha emission is systematically larger than visual extinction deduced from the Balmer lines alone, if one assumes a value Av/E(B-V) 3. An optically-limited sample of about 30 extragalactic H II regions has a mean extinction of 1.7 m in the visual while about 1.2 m is not seen in the reddening of the Balmer lines. Both reddening and extinction decreases with increasing galactic radius, at least for M33 and M101

  5. A reconciliation of extinction theories

    International Nuclear Information System (INIS)

    Sabine, T.M.

    1988-01-01

    The differences between previous theoretical treatments of extinction based on the Darwin intensity equations arise because of the different functional form chosen for the coupling constant σ. When the same function is used these theories make closely similar predictions. It is shown that a limiting condition on integrated intensity as the crystal size increases puts restrictions on the functions which may be used. A Lorentzian or Fresnellian function can be used for primary extinction while secondary extinction requires a Gaussian, rectangular or triangular function. An analytical expression is given for the variation in the value of the extinction factor with scattering angle. (orig.)

  6. VLT/X-shooter GRBs: Individual extinction curves of star-forming regions★

    Science.gov (United States)

    Zafar, T.; Watson, D.; Møller, P.; Selsing, J.; Fynbo, J. PU; Schady, P.; Wiersema, K.; Levan, A. J.; Heintz, K. E.; Postigo, A. de Ugarte; D'Elia, V.; Jakobsson, P.; Bolmer, J.; Japelj, J.; Covino, S.; Gomboc, A.; Cano, Z.

    2018-05-01

    The extinction profiles in Gamma-Ray Burst (GRB) afterglow spectral energy distributions (SEDs) are usually described by the Small Magellanic Cloud (SMC)-type extinction curve. In different empirical extinction laws, the total-to-selective extinction, RV, is an important quantity because of its relation to dust grain sizes and compositions. We here analyse a sample of 17 GRBs (0.34a single or broken power-law together with a parametric extinction law is used to model the individual SEDs. We find 10 cases with significant dust, where the derived extinction, AV, ranges from 0.1-1.0 mag. In four of those, the inferred extinction curves are consistent with the SMC curve. The GRB individual extinction curves have a flat RV distribution with an optimal weighted combined value of RV = 2.61 ± 0.08 (for seven broad coverage cases). The `average GRB extinction curve' is similar to, but slightly steeper than the typical SMC, and consistent with the SMC Bar extinction curve at ˜95% confidence level. The resultant steeper extinction curves imply populations of small grains, where large dust grains may be destroyed due to GRB activity. Another possibility could be that young age and/or lower metallicities of GRBs environments are responsible for the steeper curves.

  7. Phenomenon of primary and secondary extinction in textured material

    International Nuclear Information System (INIS)

    Kryshtab, T.G.; Palacios G, J.; Mazin, M.O.

    2002-01-01

    A new X-ray diffraction method is proposed for a more exact calculation of pole figures to determine the crystallite orientation distribution function (CODF) in textured materials, by the introduction of a correction of the integrated intensity of the diffracted beam due to the phenomenon of extinction. Besides, for the case of a symmetrical Bragg reflection from an ''infinitely thick'' flat parallel plate textured sample a simple solution is developed for the problem of separation and determination of primary and secondary extinction parameters, which can be present simultaneously. The determination of these parameters gives additional information about crystallite structure and allows us to evaluate the average subgrains size and their disorientation, respectively. In this work according to the dynamic diffraction theory, it is shown that the extinction length, which is directly connected with the phenomenon of primary extinction, in the Bragg geometry for σ polarization (perpendicular) is independent on the wavelength used for a given reflection. On the other hand, the additional contribution from secondary extinction depends on X-ray wavelength due to the change of effective absorption coefficient. Considering this fact, the calculations of pole density and the parameters of primary and secondary extinction are performed using the same strong reflection for two different wavelengths and, for one of these wavelengths, a second order of reflection. For confirmation of the proposed method a partially cold rolled aluminium sample and an aluminium powder standard sample were measured. The corrected pole densities, the values of primary and secondary extinction and the average sizes of perfect coherent areas and average angle of disorientation of subgrains in the selected directions were obtained. The obtained results show that the precise X-ray diffraction characterization of textured materials requires the consideration, in general, of primary as well as secondary

  8. Global extinction in spiral galaxies

    NARCIS (Netherlands)

    Tully, RB; Pierce, MJ; Saunders, W; Verheijen, MAW; Witchalls, PL

    Magnitude-limited samples of spiral galaxies drawn from the Ursa Major and Pisces Clusters are used to determine their extinction properties as a function of inclination. Imaging photometry is available for 87 spirals in the B, R, I, and K' bands. Extinction causes systematic scatter in

  9. Evolution: Postponing Extinction by Polyandry

    OpenAIRE

    Wade, Michael J.

    2010-01-01

    Sex-ratio meiotic drive occurs when males produce a predominance of X-chromosome bearing sperm and an inordinate number of daughters. A driving X causes highly female-biased sex ratios and the risk of extinction. Polyandry can rescue a population from extinction.

  10. Optimising Extinction of Conditioned Disgust

    NARCIS (Netherlands)

    Bosman, Renske C.; Borg, Charmaine; de Jong, Peter J.

    2016-01-01

    Maladaptive disgust responses are tenacious and resistant to exposure-based interventions. In a similar vein, laboratory studies have shown that conditioned disgust is relatively insensitive to Conditioned Stimulus (CS)-only extinction procedures. The relatively strong resistance to extinction might

  11. Behavioral tagging of extinction learning.

    Science.gov (United States)

    de Carvalho Myskiw, Jociane; Benetti, Fernando; Izquierdo, Iván

    2013-01-15

    Extinction of contextual fear in rats is enhanced by exposure to a novel environment at 1-2 h before or 1 h after extinction training. This effect is antagonized by administration of protein synthesis inhibitors anisomycin and rapamycin into the hippocampus, but not into the amygdala, immediately after either novelty or extinction training, as well as by the gene expression blocker 5,6-dichloro-1-beta-D-ribofuranosylbenzimidazole administered after novelty training, but not after extinction training. Thus, this effect can be attributed to a mechanism similar to synaptic tagging, through which long-term potentiation can be enhanced by other long-term potentiations or by exposure to a novel environment in a protein synthesis-dependent fashion. Extinction learning produces a tag at the appropriate synapses, whereas novelty learning causes the synthesis of plasticity-related proteins that are captured by the tag, strengthening the synapses that generated this tag.

  12. Extinction of Harrington's mountain goat

    International Nuclear Information System (INIS)

    Mead, J.I.; Martin, P.S.; Euler, R.C.; Long, A.; Jull, A.J.T.; Toolin, L.J.; Donahue, D.J.; Linick, T.W.

    1986-01-01

    Keratinous horn sheaths of the extinct Harrington's mountain goat, Oreamnos harringtoni, were recovered at or near the surface of dry caves of the Grand Canyon, Arizona. Twenty-three separate specimens from two caves were dated nondestructively by the tandem accelerator mass spectrometer (TAMS). Both the TAMS and the conventional dates indicate that Harrington's mountain goat occupied the Grand Canyon for at least 19,000 years prior to becoming extinct by 11,160 +/- 125 radiocarbon years before present. The youngest average radiocarbon dates on Shasta ground sloths, Nothrotheriops shastensis, from the region are not significantly younger than those on extinct mountain goats. Rather than sequential extinction with Harrington's mountain goat disappearing from the Grand Canyon before the ground sloths, as one might predict in view of evidence of climatic warming at the time, the losses were concurrent. Both extinctions coincide with the regional arrival of Clovis hunters

  13. Extinction of metal fires

    International Nuclear Information System (INIS)

    Mellottee, H.

    1977-01-01

    The main points of a large bibliography on liquid and solid metal fires are set out. The various methods used to fight these fires are presented; covering by powders is specially emphasized. Since this method has promising results, the various possible techniques, extinction by cooling the metal, by blanketing, by formation of a continuous insulating layer (by fusion or pyrolysis of a powder) or by a surface reaction between powder and metal are studied. The conditions of conservation and use of powders are outlined, then the various powders are described: inert powders, powders undergoing a physical transformation (fusion or vitrification of an organic compound, fusion of eutectic inorganic mixtures), multiple effect powders. Precise examples are quoted [fr

  14. MEASUREMENTS OF DUST EXTINCTION IN HIGHLY INCLINED SPIRAL GALAXIES

    NARCIS (Netherlands)

    JANSEN, RA; KNAPEN, JH; BECKMAN, JE; PELETIER, RF; HES, R

    1994-01-01

    We study the extinction properties of dust in the well-defined dust lanes of four highly inclined galaxies, using U-, B-, V-, R- and I-band CCD and J- and K'-band near-infrared array images. For three of these galaxies, we could use the symmetry of the underlying light profile to obtain absolute

  15. Evaluation of Rock Joint Coefficients

    Science.gov (United States)

    Audy, Ondřej; Ficker, Tomáš

    2017-10-01

    A computer method for evaluation of rock joint coefficients is described and several applications are presented. The method is based on two absolute numerical indicators that are formed by means of the Fourier replicas of rock joint profiles. The first indicator quantifies the vertical depth of profiles and the second indicator classifies wavy character of profiles. The absolute indicators have replaced the formerly used relative indicators that showed some artificial behavior in some cases. This contribution is focused on practical computations testing the functionality of the newly introduced indicators.

  16. Comparison of inter-diffusion coefficients for Ni/Cu thin films determined from classical heating analysis and linear temperature ramping analysis by means of profile reconstruction and a numerical solution of Fick's law

    International Nuclear Information System (INIS)

    Joubert, H.D.; Terblans, J.J.; Swart, H.C.

    2009-01-01

    Classical inter-diffusion studies assume a constant time of annealing when samples are annealed in a furnace. It is assumed that the sample temperature reaches the annealing temperature immediately after insertion, while the sample temperature immediately drops to room temperature after removal, the annealing time being taken as the time between insertion and removal. Using the above assumption, the diffusion coefficient can be calculated in a number of ways. In reality, the sample temperature does not immediately reach the annealing temperature; instead it rises at a rate governed by several heat transfer mechanisms, depending on the annealing procedure. For short annealing times, the sample temperature may not attain the annealing temperature, while for extended annealing times the sample temperature may reach the annealing temperature only for a fraction of the annealing time. To eliminate the effect of heat transfer mechanisms, a linear temperature ramping regime is proposed. Used in conjunction with a suitable profile reconstructing technique and a numerical solution of Fick's second law, the inter-diffusion parameters obtained from a linear ramping of Ni/Cu thin film samples can be compared to those obtained from calculations performed with the so-called Mixing-Roughness-Information model or any other suitable method used to determine classical diffusion coefficients.

  17. Selection in a subdivided population with local extinction and recolonization.

    Science.gov (United States)

    Cherry, Joshua L

    2003-01-01

    In a subdivided population, local extinction and subsequent recolonization affect the fate of alleles. Of particular interest is the interaction of this force with natural selection. The effect of selection can be weakened by this additional source of stochastic change in allele frequency. The behavior of a selected allele in such a population is shown to be equivalent to that of an allele with a different selection coefficient in an unstructured population with a different size. This equivalence allows use of established results for panmictic populations to predict such quantities as fixation probabilities and mean times to fixation. The magnitude of the quantity N(e)s(e), which determines fixation probability, is decreased by extinction and recolonization. Thus deleterious alleles are more likely to fix, and advantageous alleles less likely to do so, in the presence of extinction and recolonization. Computer simulations confirm that the theoretical predictions of both fixation probabilities and mean times to fixation are good approximations. PMID:12807797

  18. Genetic sex determination and extinction.

    Science.gov (United States)

    Hedrick, Philip W; Gadau, Jürgen; Page, Robert E

    2006-02-01

    Genetic factors can affect the probability of extinction either by increasing the effect of detrimental variants or by decreasing the potential for future adaptive responses. In a recent paper, Zayed and Packer demonstrate that low variation at a specific locus, the complementary sex determination (csd) locus in Hymenoptera (ants, bees and wasps), can result in a sharply increased probability of extinction. Their findings illustrate situations in which there is a feedback process between decreased genetic variation at the csd locus owing to genetic drift and decreased population growth, resulting in an extreme type of extinction vortex for these ecologically important organisms.

  19. Reconsidering the extinction of ichthyosaurs

    OpenAIRE

    Fischer, Valentin

    2010-01-01

    Despite their extreme adaptation to life in open sea, ichthyosaurs were one of the first major groups of post-Triassic marine reptiles to disappear, at the end of Cenomanian, whereas plesiosaurs, mosasaurs and numerous families of marine crocodiles and sea turtles disappeared during the Cretaceous/Paleocene Extinction Event. It has been proposed that unique biological factors drove ichthyosaurs to extinction, namely a break in the food chain at the level of belemnites or a progressive ecologi...

  20. The Sixth Great Mass Extinction

    Science.gov (United States)

    Wagler, Ron

    2012-01-01

    Five past great mass extinctions have occurred during Earth's history. Humanity is currently in the midst of a sixth, human-induced great mass extinction of plant and animal life (e.g., Alroy 2008; Jackson 2008; Lewis 2006; McDaniel and Borton 2002; Rockstrom et al. 2009; Rohr et al. 2008; Steffen, Crutzen, and McNeill 2007; Thomas et al. 2004;…

  1. Activation of orexin/hypocretin neurons is associated with individual differences in cued fear extinction.

    Science.gov (United States)

    Sharko, Amanda C; Fadel, Jim R; Kaigler, Kris F; Wilson, Marlene A

    2017-09-01

    Identifying the neurobiological mechanisms that underlie differential sensitivity to stress is critical for understanding the development and expression of stress-induced disorders, such as post-traumatic stress disorder (PTSD). Preclinical studies have suggested that rodents display different phenotypes associated with extinction of Pavlovian conditioned fear responses, with some rodent populations being resistant to extinction. An emerging literature also suggests a role for orexins in the consolidation processes associated with fear learning and extinction. To examine the possibility that the orexin system might be involved in individual differences in fear extinction, we used a Pavlovian conditioning paradigm in outbred Long-Evans rats. Rats showed significant variability in the extinction of cue-conditioned freezing and extinction recall, and animals were divided into groups based on their extinction profiles based on a median split of percent freezing behavior during repeated exposure to the conditioned cue. Animals resistant to extinction (high freezers) showed more freezing during repeated cue presentations during the within trial and between trial extinction sessions compared with the group showing significant extinction (low freezers), although there were no differences between these groups in freezing upon return to the conditioned context or during the conditioning session. Following the extinction recall session, activation of orexin neurons was determined using dual label immunohistochemistry for cFos in orexin positive neurons in the hypothalamus. Individual differences in the extinction of cue conditioned fear were associated with differential activation of hypothalamic orexin neurons. Animals showing poor extinction of cue-induced freezing (high freezers) had significantly greater percentage of orexin neurons with Fos in the medial hypothalamus than animals displaying significant extinction and good extinction recall (low freezers). Further, the

  2. Thermal Transgressions and Phanerozoic Extinctions

    Science.gov (United States)

    Worsley, T. R.; Kidder, D. L.

    2007-12-01

    A number of significant Phanerozoic extinctions are associated with marine transgressions that were probably driven by rapid ocean warming. The conditions associated with what we call thermal transgressions are extremely stressful to life on Earth. The Earth system setting associated with end-Permian extinction exemplifies an end-member case of our model. The conditions favoring extreme warmth and sea-level increases driven by thermal expansion are also conducive to changes in ocean circulation that foster widespread anoxia and sulfidic subsurface ocean waters. Equable climates are characterized by reduced wind shear and weak surface ocean circulation. Late Permian and Early Triassic thermohaline circulation differs considerably from today's world, with minimal polar sinking and intensified mid-latitude sinking that delivers sulfate from shallow evaporative areas to deeper water where it is reduced to sulfide. Reduced nutrient input to oceans from land at many of the extinction intervals results from diminished silicate weathering and weakened delivery of iron via eolian dust. The falloff in iron-bearing dust leads to minimal nitrate production, weakening food webs and rendering faunas and floras more susceptible to extinction when stressed. Factors such as heat, anoxia, ocean acidification, hypercapnia, and hydrogen sulfide poisoning would significantly affect these biotas. Intervals of tectonic quiescence set up preconditions favoring extinctions. Reductions in chemical silicate weathering lead to carbon dioxide buildup, oxygen drawdown, nutrient depletion, wind and ocean current abatement, long-term global warming, and ocean acidification. The effects of extinction triggers such as large igneous provinces, bolide impacts, and episodes of sudden methane release are more potent against the backdrop of our proposed preconditions. Extinctions that have characteristics we call for in the thermal transgressions include the Early Cambrian Sinsk event, as well as

  3. Research and Development for the Mu2e Extinction Monitor

    International Nuclear Information System (INIS)

    Mott, Casey Benjamin

    2016-01-01

    Mu2e is a planned experiment to search for flavor-violating conversion from a muon to an electron. The experiment will use a pulsed 8 GeV proton beam to produce muons which will then stop in an aluminum target. Mu2e will search for the μ - + Al → e - + Al process. For Mu2e, an extinction rate of 10 -10 is required to reduce the backgrounds to an acceptable level. Extinction is the ratio of the amount of protons striking the production target between beam pulses to the number striking it during the beam pulse. One of the backgrounds, off-target interactions, was simulated using G4beamline and Fermilab's Grid setup to confirm that an extinction rate of 10 -10 is possible. The extinction level will be measured by the extinction monitor which will include scintillation counters read out by photomultiplier tubes. In order to build a beam time profile, low fake responses (after pulses) are needed in the photomultiplier tubes. This thesis determines the best combination of resistors, voltage, and other components that provide the lowest after pulse rate.

  4. Research and Development for the Mu2e Extinction Monitor

    Energy Technology Data Exchange (ETDEWEB)

    Mott, Casey Benjamin [Northern Illinois U.

    2016-01-01

    Mu2e is a planned experiment to search for flavor-violating conversion from a muon to an electron. The experiment will use a pulsed 8 GeV proton beam to produce muons which will then stop in an aluminum target. Mu2e will search for the $\\mu^- + Al \\rightarrow e^- + Al$ process. For Mu2e, an extinction rate of 10$^{-10}$ is required to reduce the backgrounds to an acceptable level. Extinction is the ratio of the amount of protons striking the production target between beam pulses to the number striking it during the beam pulse. One of the backgrounds, off-target interactions, was simulated using G4beamline and Fermilab's Grid setup to confirm that an extinction rate of 10$^{-10}$ is possible. The extinction level will be measured by the extinction monitor which will include scintillation counters read out by photomultiplier tubes. In order to build a beam time profile, low fake responses (after pulses) are needed in the photomultiplier tubes. This thesis determines the best combination of resistors, voltage, and other components that provide the lowest after pulse rate.

  5. The extinction of the dinosaurs.

    Science.gov (United States)

    Brusatte, Stephen L; Butler, Richard J; Barrett, Paul M; Carrano, Matthew T; Evans, David C; Lloyd, Graeme T; Mannion, Philip D; Norell, Mark A; Peppe, Daniel J; Upchurch, Paul; Williamson, Thomas E

    2015-05-01

    Non-avian dinosaurs went extinct 66 million years ago, geologically coincident with the impact of a large bolide (comet or asteroid) during an interval of massive volcanic eruptions and changes in temperature and sea level. There has long been fervent debate about how these events affected dinosaurs. We review a wealth of new data accumulated over the past two decades, provide updated and novel analyses of long-term dinosaur diversity trends during the latest Cretaceous, and discuss an emerging consensus on the extinction's tempo and causes. Little support exists for a global, long-term decline across non-avian dinosaur diversity prior to their extinction at the end of the Cretaceous. However, restructuring of latest Cretaceous dinosaur faunas in North America led to reduced diversity of large-bodied herbivores, perhaps making communities more susceptible to cascading extinctions. The abruptness of the dinosaur extinction suggests a key role for the bolide impact, although the coarseness of the fossil record makes testing the effects of Deccan volcanism difficult. © 2014 The Authors. Biological Reviews © 2014 Cambridge Philosophical Society.

  6. Infectious Disease, Endangerment, and Extinction

    Science.gov (United States)

    MacPhee, Ross D. E.; Greenwood, Alex D.

    2013-01-01

    Infectious disease, especially virulent infectious disease, is commonly regarded as a cause of fluctuation or decline in biological populations. However, it is not generally considered as a primary factor in causing the actual endangerment or extinction of species. We review here the known historical examples in which disease has, or has been assumed to have had, a major deleterious impact on animal species, including extinction, and highlight some recent cases in which disease is the chief suspect in causing the outright endangerment of particular species. We conclude that the role of disease in historical extinctions at the population or species level may have been underestimated. Recent methodological breakthroughs may lead to a better understanding of the past and present roles of infectious disease in influencing population fitness and other parameters. PMID:23401844

  7. Open-path, closed-path and reconstructed aerosol extinction at a rural site.

    Science.gov (United States)

    Gordon, Timothy D; Prenni, Anthony J; Renfro, James R; McClure, Ethan; Hicks, Bill; Onasch, Timothy B; Freedman, Andrew; McMeeking, Gavin R; Chen, Ping

    2018-04-09

    The Handix Scientific Open-Path Cavity Ringdown Spectrometer (OPCRDS) was deployed during summer 2016 in Great Smoky Mountains National Park (GRSM). Extinction coefficients from the relatively new OPCRDS and from a more well-established extinction instrument agreed to within 7%. Aerosol hygroscopic growth (f(RH)) was calculated from the ratio of ambient extinction measured by the OPCRDS to dry extinction measured by a closed-path extinction monitor (Aerodyne's Cavity Attenuated Phase Shift Particulate Matter Extinction Monitor, CAPS PMex). Derived hygroscopicity (RH 1995 at the same site and time of year, which is noteworthy given the decreasing trend for organics and sulfate in the eastern U.S. However, maximum f(RH) values in 1995 were less than half as large as those recorded in 2016-possibly due to nephelometer truncation losses in 1995. Two hygroscopicity parameterizations were investigated using high time resolution OPCRDS+CAPS PMex data, and the K ext model was more accurate than the γ model. Data from the two ambient optical instruments, the OPCRDS and the open-path nephelometer, generally agreed; however, significant discrepancies between ambient scattering and extinction were observed, apparently driven by a combination of hygroscopic growth effects, which tend to increase nephelometer truncation losses and decrease sensitivity to the wavelength difference between the two instruments as a function of particle size. There was not a statistically significant difference in the mean reconstructed extinction values obtained from the original and the revised IMPROVE (Interagency Monitoring of Protected Visual Environments) equations. On average IMPROVE reconstructed extinction was ~25% lower than extinction measured by the OPCRDS, which suggests that the IMPROVE equations and 24-hr aerosol data are moderately successful in estimating current haze levels at GRSM. However, this conclusion is limited by the coarse temporal resolution and the low dynamic range of

  8. Theory of invasion extinction dynamics in minimal food webs

    Science.gov (United States)

    Haerter, Jan O.; Mitarai, Namiko; Sneppen, Kim

    2018-02-01

    When food webs are exposed to species invasion, secondary extinction cascades may be set off. Although much work has gone into characterizing the structure of food webs, systematic predictions on their evolutionary dynamics are still scarce. Here we present a theoretical framework that predicts extinctions in terms of an alternating sequence of two basic processes: resource depletion by or competitive exclusion between consumers. We first propose a conceptual invasion extinction model (IEM) involving random fitness coefficients. We bolster this IEM by an analytical, recursive procedure for calculating idealized extinction cascades after any species addition and simulate the long-time evolution. Our procedure describes minimal food webs where each species interacts with only a single resource through the generalized Lotka-Volterra equations. For such food webs ex- tinction cascades are determined uniquely and the system always relaxes to a stable steady state. The dynamics and scale invariant species life time resemble the behavior of the IEM, and correctly predict an upper limit for trophic levels as observed in the field.

  9. Mass Extinctions and Supernova Explosions

    Science.gov (United States)

    Korschinek, Gunther

    A nearby supernova (SN) explosion could have negatively influenced life on Earth, maybe even been responsible for mass extinctions. Mass extinction poses a significant extinction of numerous species on Earth, as recorded in the paleontologic, paleoclimatic, and geological record of our planet. Depending on the distance between the Sun and the SN, different types of threats have to be considered, such as ozone depletion on Earth, causing increased exposure to the Sun's ultraviolet radiation or the direct exposure of lethal X-rays. Another indirect effect is cloud formation, induced by cosmic rays in the atmosphere which result in a drop in the Earth's temperature, causing major glaciations of the Earth. The discovery of highly intensive gamma-ray bursts (GRBs), which could be connected to SNe, initiated further discussions on possible life-threatening events in the Earth's history. The probability that GRBs hit the Earth is very low. Nevertheless, a past interaction of Earth with GRBs and/or SNe cannot be excluded and might even have been responsible for past extinction events.

  10. Modeling Population Growth and Extinction

    Science.gov (United States)

    Gordon, Sheldon P.

    2009-01-01

    The exponential growth model and the logistic model typically introduced in the mathematics curriculum presume that a population grows exclusively. In reality, species can also die out and more sophisticated models that take the possibility of extinction into account are needed. In this article, two extensions of the logistic model are considered,…

  11. New theories about ancient extinctions

    Science.gov (United States)

    Spall, H.

    1986-01-01

    The abrupt disappearance of all the dinosaurs about 65 million years ago, along with perhaps half the plant species and other animals, has been one of the great geological mysteries. Clues to the cause of these extinctions have been scarce and open to many interpretations.

  12. Extinction debt on oceanic islands

    DEFF Research Database (Denmark)

    Triantis, Kostas A.; Borges, Paulo A. V.; Ladle, Richard J.

    2010-01-01

    the magnitude of such future extinction events has been hampered by potentially inaccurate assumptions about the slope of species-area relationships, which are habitat- and taxon-specific. We overcome this challenge by applying a method that uses the historical sequence of deforestation in the Azorean Islands...

  13. The currency and tempo of extinction.

    Science.gov (United States)

    Regan, H M; Lupia, R; Drinnan, A N; Burgman, M A

    2001-01-01

    This study examines estimates of extinction rates for the current purported biotic crisis and from the fossil record. Studies that compare current and geological extinctions sometimes use metrics that confound different sources of error and reflect different features of extinction processes. The per taxon extinction rate is a standard measure in paleontology that avoids some of the pitfalls of alternative approaches. Extinction rates reported in the conservation literature are rarely accompanied by measures of uncertainty, despite many elements of the calculations being subject to considerable error. We quantify some of the most important sources of uncertainty and carry them through the arithmetic of extinction rate calculations using fuzzy numbers. The results emphasize that estimates of current and future rates rely heavily on assumptions about the tempo of extinction and on extrapolations among taxa. Available data are unlikely to be useful in measuring magnitudes or trends in current extinction rates.

  14. EARTH SCIENCE: Did Volcanoes Drive Ancient Extinctions?

    Science.gov (United States)

    Kerr, R A

    2000-08-18

    With the publication in recent weeks of two papers on a mass extinction 183 million years ago, researchers can add five suggestive cases to the list of extinctions with known causes. These extinctions coincide with massive outpourings of lava, accompanied by signs that global warming threw the ocean-atmosphere system out of whack. Although no one can yet pin any of these mass extinctions with certainty on the volcanic eruptions, scientists say it's unlikely that they're all coincidences.

  15. An investigation of the interstellar extinction

    International Nuclear Information System (INIS)

    Roche, P.F.; Aitken, D.K.; Melbourne Univ., Point Cook

    1984-01-01

    The 10 μm extinction towards six WC8 or WC9 Wolf-Rayet stars is investigated. All objects show smooth dust emission suffering silicate absorption with depths well correlated with the extinction in the visible. The de-reddened spectra are well represented by emission from featureless grain components, possibly from iron or carbon grains. The extinction to the stars is found to be dominantly interstellar in origin with little extinction from the circumstellar shell. (author)

  16. MODELING GALACTIC EXTINCTION WITH DUST AND 'REAL' POLYCYCLIC AROMATIC HYDROCARBONS

    Energy Technology Data Exchange (ETDEWEB)

    Mulas, Giacomo; Casu, Silvia; Cecchi-Pestellini, Cesare [INAF-Osservatorio Astronomico di Cagliari, Strada n.54, Loc. Poggio dei Pini, I-09012 Capoterra (Italy); Zonca, Alberto, E-mail: gmulas@oa-cagliari.inaf.it, E-mail: silvia@oa-cagliari.inaf.it, E-mail: ccp@oa-cagliari.inaf.it, E-mail: azonca@oa-cagliari.inaf.it [Dipartimento di Fisica, Universita di Cagliari, Strada Prov.le Monserrato-Sestu Km 0.700, I-09042 Monserrato (Italy)

    2013-07-01

    We investigate the remarkable apparent variety of galactic extinction curves by modeling extinction profiles with core-mantle grains and a collection of single polycyclic aromatic hydrocarbons. Our aim is to translate a synthetic description of dust into physically well-grounded building blocks through the analysis of a statistically relevant sample of different extinction curves. All different flavors of observed extinction curves, ranging from the average galactic extinction curve to virtually 'bumpless' profiles, can be described by the present model. We prove that a mixture of a relatively small number (54 species in 4 charge states each) of polycyclic aromatic hydrocarbons can reproduce the features of the extinction curve in the ultraviolet, dismissing an old objection to the contribution of polycyclic aromatic hydrocarbons to the interstellar extinction curve. Despite the large number of free parameters (at most the 54 Multiplication-Sign 4 column densities of each species in each ionization state included in the molecular ensemble plus the 9 parameters defining the physical properties of classical particles), we can strongly constrain some physically relevant properties such as the total number of C atoms in all species and the mean charge of the mixture. Such properties are found to be largely independent of the adopted dust model whose variation provides effects that are orthogonal to those brought about by the molecular component. Finally, the fitting procedure, together with some physical sense, suggests (but does not require) the presence of an additional component of chemically different very small carbonaceous grains.

  17. Further Evidence of Auditory Extinction in Aphasia

    Science.gov (United States)

    Marshall, Rebecca Shisler; Basilakos, Alexandra; Love-Myers, Kim

    2013-01-01

    Purpose: Preliminary research ( Shisler, 2005) suggests that auditory extinction in individuals with aphasia (IWA) may be connected to binding and attention. In this study, the authors expanded on previous findings on auditory extinction to determine the source of extinction deficits in IWA. Method: Seventeen IWA (M[subscript age] = 53.19 years)…

  18. Secondary extinction in cylindrical and spherical crystals for X-ray and neutron diffraction

    International Nuclear Information System (INIS)

    Hu Huachen; Li Zhaohuan; Yang Bin; Shen Caiwan

    2001-01-01

    The distribution of the reflection power ratio for a neutron or x-ray diffracted from a cylindrical crystal immersed in an homogenous incident beam is obtained by the numerical solution of the transfer equations for the first time. The profile well reflects all the physical properties of the absorption and extinction behaviour in the crystals. A systematic investigation of the secondary extinction for cylindrical and spherical crystals was carried out based on these results

  19. Predicting extinction rates in stochastic epidemic models

    International Nuclear Information System (INIS)

    Schwartz, Ira B; Billings, Lora; Dykman, Mark; Landsman, Alexandra

    2009-01-01

    We investigate the stochastic extinction processes in a class of epidemic models. Motivated by the process of natural disease extinction in epidemics, we examine the rate of extinction as a function of disease spread. We show that the effective entropic barrier for extinction in a susceptible–infected–susceptible epidemic model displays scaling with the distance to the bifurcation point, with an unusual critical exponent. We make a direct comparison between predictions and numerical simulations. We also consider the effect of non-Gaussian vaccine schedules, and show numerically how the extinction process may be enhanced when the vaccine schedules are Poisson distributed

  20. Ångström coefficient as a tracer of the continental aerosols

    NARCIS (Netherlands)

    Kuśmierczyk-Michulec, J.T.; Eijk, A.M.J. van

    2007-01-01

    The variation of the extinction coefficient with wavelength can be presented as a power law function with a constant (related to the power factor) known as the Ångström coefficient. When the particle size distribution is dominated by small particles, usually associated with pollution, the Ångström

  1. Extinction risk escalates in the tropics.

    Directory of Open Access Journals (Sweden)

    Jana C Vamosi

    Full Text Available The latitudinal biodiversity gradient remains one of the most widely recognized yet puzzling patterns in nature. Presently, the high level of extinction of tropical species, referred to as the "tropical biodiversity crisis", has the potential to erode this pattern. While the connection between species richness, extinction, and speciation has long intrigued biologists, these interactions have experienced increased poignancy due to their relevancy to where we should concentrate our conservation efforts. Natural extinction is a phenomenon thought to have its own latitudinal gradient, with lower extinction rates in the tropics being reported in beetles, birds, mammals, and bivalves. Processes that have buffered ecosystems from high extinction rates in the past may also buffer ecosystems against disturbance of anthropogenic origin. While potential parallels between historical and present-day extinction patterns have been acknowledged, they remain only superficially explored and plant extinction patterns have been particularly neglected. Studies on the disappearances of animal species have reached conflicting conclusions, with the rate of extinction appearing either higher or lower in species richness hotspots. Our global study of extinction risk in vascular plants finds disproportionately higher extinction risk in tropical countries, even when indicators of human pressure (GDP, population density, forest cover change are taken into account. Our results are at odds with the notion that the tropics represent a museum of plant biodiversity (places of historically lowered extinction and we discuss mechanisms that may reconcile this apparent contradiction.

  2. Extinction risk escalates in the tropics.

    Science.gov (United States)

    Vamosi, Jana C; Vamosi, Steven M

    2008-01-01

    The latitudinal biodiversity gradient remains one of the most widely recognized yet puzzling patterns in nature. Presently, the high level of extinction of tropical species, referred to as the "tropical biodiversity crisis", has the potential to erode this pattern. While the connection between species richness, extinction, and speciation has long intrigued biologists, these interactions have experienced increased poignancy due to their relevancy to where we should concentrate our conservation efforts. Natural extinction is a phenomenon thought to have its own latitudinal gradient, with lower extinction rates in the tropics being reported in beetles, birds, mammals, and bivalves. Processes that have buffered ecosystems from high extinction rates in the past may also buffer ecosystems against disturbance of anthropogenic origin. While potential parallels between historical and present-day extinction patterns have been acknowledged, they remain only superficially explored and plant extinction patterns have been particularly neglected. Studies on the disappearances of animal species have reached conflicting conclusions, with the rate of extinction appearing either higher or lower in species richness hotspots. Our global study of extinction risk in vascular plants finds disproportionately higher extinction risk in tropical countries, even when indicators of human pressure (GDP, population density, forest cover change) are taken into account. Our results are at odds with the notion that the tropics represent a museum of plant biodiversity (places of historically lowered extinction) and we discuss mechanisms that may reconcile this apparent contradiction.

  3. Rescaling of temporal expectations during extinction

    Science.gov (United States)

    Drew, Michael R.; Walsh, Carolyn; Balsam, Peter D

    2016-01-01

    Previous research suggests that extinction learning is temporally specific. Changing the CS duration between training and extinction can facilitate the loss of the CR within the extinction session but impairs long-term retention of extinction. In two experiments using conditioned magazine approach with rats, we examined the relation between temporal specificity of extinction and CR timing. In Experiment 1 rats were trained on a 12-s, fixed CS-US interval and then extinguished with CS presentations that were 6, 12, or 24 s in duration. The design of Experiment 2 was the same except rats were trained using partial rather than continuous reinforcement. In both experiments, extending the CS duration in extinction facilitated the diminution of CRs during the extinction session, but shortening the CS duration failed to slow extinction. In addition, extending (but not shortening) the CS duration caused temporal rescaling of the CR, in that the peak CR rate migrated later into the trial over the course of extinction training. This migration partially accounted for the faster loss of the CR when the CS duration was extended. Results are incompatible with the hypothesis that extinction is driven by cumulative CS exposure and suggest that temporally extended nonreinforced CS exposure reduces conditioned responding via temporal displacement rather than through extinction per se. PMID:28045291

  4. Dinasour extinction and volcanic activity

    Science.gov (United States)

    Gledhill, J. A.

    There is at present some controversy about the reason for the mass extinction of dinosaurs and other forms of life at the end of the Cretaceous. A suggestion by Alvarez et al. [1980] that this was due to the collision of the earth with a meteorite 10 km or so in diameter has excited considerable interest [Silver and Schultz, 1982] and also some criticism [Stanley, 1984]. A recent publication [Wood, 1984] describing the catastrophic effects of a relatively minor lava flow in Iceland suggests that intense volcanic activity could have played a large part in the extinctions. In this letter it is pointed out that the Deccan lava flows in India took place in the appropriate time and may well have been of sufficient magnitude to be a major factor in the Cretaceous-Tertiary (C-T) boundary catastrophe.

  5. [Extinction and Reconsolidation of Memory].

    Science.gov (United States)

    Zuzina, A B; Balaban, P M

    2015-01-01

    Retrieval of memory followed by reconsolidation can strengthen a memory, while retrieval followed by extinction results in a decrease of memory performance due to weakening of existing memory or formation of a competing memory. In our study we analyzed the behavior and responses of identified neurons involved in the network underlying aversive learning in terrestrial snail Helix, and made an attempt to describe the conditions in which the retrieval of memory leads either to extinction or reconsolidation. In the network underlying the withdrawal behavior, sensory neurons, premotor interneurons, motor neurons, and modulatory for this network serotonergic neurons are identified and recordings from representatives of these groups were made before and after aversive learning. In the network underlying feeding behavior, the premotor modulatory serotonergic interneurons and motor neurons involved in motor program of feeding are identified. Analysis of changes in neural activity after aversive learning showed that modulatory neurons of feeding behavior do not demonstrate any changes (sometimes a decrease of responses to food was observed), while responses to food in withdrawal behavior premotor interneurons changed qualitatively, from under threshold EPSPs to spike discharges. Using a specific for serotonergic neurons neurotoxin 5,7-DiHT it was shown previously that the serotonergic system is necessary for the aversive learning, but is not necessary for maintenance and retrieval of this memory. These results suggest that the serotonergic neurons that are necessary as part of a reinforcement for developing the associative changes in the network may be not necessary for the retrieval of memory. The hypothesis presented in this review concerns the activity of the "reinforcement" serotonergic neurons that is suggested to be the gate condition for the choice between extinction/reconsolidation triggered by memory retrieval: if these serotonergic neurons do not respond during the

  6. Optimising Extinction of Conditioned Disgust.

    Science.gov (United States)

    Bosman, Renske C; Borg, Charmaine; de Jong, Peter J

    2016-01-01

    Maladaptive disgust responses are tenacious and resistant to exposure-based interventions. In a similar vein, laboratory studies have shown that conditioned disgust is relatively insensitive to Conditioned Stimulus (CS)-only extinction procedures. The relatively strong resistance to extinction might be explained by disgust's adaptive function to motivate avoidance from contamination threats (pathogens) that cannot be readily detected and are invisible to the naked eye. Therefore, the mere visual presentation of unreinforced disgust eliciting stimuli might not be sufficient to correct a previously acquired threat value of the CS+. Following this, the current study tested whether the efficacy of CS-only exposure can be improved by providing additional safety information about the CS+. For the CSs we included two neutral items a pea soup and a sausage roll, whereas for the Unconditioned Stimulus (US) we used one video clip of a woman vomiting and a neutral one about glass blowing. The additional safety information was conveyed by allowing actual contact with the CS+ or by observing an actress eating the food items representing the CS+. When additional safety information was provided via allowing direct contact with the CS+, there was a relatively strong post-extinction increase in participants' willingness-to-eat the CS+. This beneficial effect was still evident at one-week follow up. Also self-reported disgust was lower at one-week follow up when additional safety information was provided. The current findings help explain why disgust is relatively insensitive to CS-only extinction procedures, and provide helpful starting points to improve interventions that are aimed to reduce distress in disgust-related psychopathology.

  7. Optimising Extinction of Conditioned Disgust.

    Directory of Open Access Journals (Sweden)

    Renske C Bosman

    Full Text Available Maladaptive disgust responses are tenacious and resistant to exposure-based interventions. In a similar vein, laboratory studies have shown that conditioned disgust is relatively insensitive to Conditioned Stimulus (CS-only extinction procedures. The relatively strong resistance to extinction might be explained by disgust's adaptive function to motivate avoidance from contamination threats (pathogens that cannot be readily detected and are invisible to the naked eye. Therefore, the mere visual presentation of unreinforced disgust eliciting stimuli might not be sufficient to correct a previously acquired threat value of the CS+. Following this, the current study tested whether the efficacy of CS-only exposure can be improved by providing additional safety information about the CS+. For the CSs we included two neutral items a pea soup and a sausage roll, whereas for the Unconditioned Stimulus (US we used one video clip of a woman vomiting and a neutral one about glass blowing. The additional safety information was conveyed by allowing actual contact with the CS+ or by observing an actress eating the food items representing the CS+. When additional safety information was provided via allowing direct contact with the CS+, there was a relatively strong post-extinction increase in participants' willingness-to-eat the CS+. This beneficial effect was still evident at one-week follow up. Also self-reported disgust was lower at one-week follow up when additional safety information was provided. The current findings help explain why disgust is relatively insensitive to CS-only extinction procedures, and provide helpful starting points to improve interventions that are aimed to reduce distress in disgust-related psychopathology.

  8. Extinction correction and synchrotron radiation

    International Nuclear Information System (INIS)

    Suortti, P.

    1983-01-01

    The primary extinction factor ysub(p) is defined as the ratio of the integrated reflection from a coherently diffracting domain to the integrated kinematical reflection from the same domain. When ysub(p) is larger than 0.5 it may be approximated by ysub(p)= exp[-(αdelta) 2 ], where α is about 0.5 and delta the average size of the coherent domain when measured in units of the extinction length Λ, delta = D/Λ. Transfer equations are applied to symmetrical Laue diffraction, and the reflectivity per unit length, sigma(epsilon) is solved from the measured reflecting ratio as a function of the rocking angle epsilon = theta -thetasub(B). Measurements with conventional x-ray sources are made on single crystal slabs of Be and Si using AgKβ, MoKα 1 and CuKα radiation. The primary extinction factor ysub(p)(epsilon) is solved from a point-by-point comparison of two measurements where the extinction length Λ is changed by varying the polarization and/or wavelength of the x-ray beam. The results show that primary and secondary extinction are strongly correlated, and that the customary assumption of independent size and orientation distributions of crystal mosaics is unjustified. The structure factors for Be and Si show close agreement with other recent measurements and calculations. The limitations of the method are discussed in length, particularly the effects of beam divergences and incoherence of the rays in the crystal. It is concluded that under typical experimental conditions the requirements of the theory are met. Practical limitations arising from the use of characteristic wavelengths and unpolarized radiation prohibit the use of the full potential of the method. The properties of a synchrotron radiation source are compared with a conventional x-ray source, and it is demonstrated that the experimental limitations can be removed by the use of synchrotron radiation. A diffraction experiment with synchrotron radiation is outlined, as well as generalization of the

  9. MODELING EXTRAGALACTIC EXTINCTION THROUGH GAMMA-RAY BURST AFTERGLOWS

    Energy Technology Data Exchange (ETDEWEB)

    Zonca, Alberto; Mulas, Giacomo; Casu, Silvia; Aresu, Giambattista [INAF—Osservatorio Astronomico di Cagliari, Via della Scienza 5, I-09047 Selargius (Italy); Cecchi-Pestellini, Cesare, E-mail: azonca@oa-cagliari.inaf.it, E-mail: gmulas@oa-cagliari.inaf.it, E-mail: silvia@oa-cagliari.inaf.it, E-mail: garesu@oa-cagliari.inaf.it, E-mail: cecchi-pestellini@astropa.inaf.it [INAF—Osservatorio Astronomico di Palermo, P.za Parlamento 1, I-90134 Palermo (Italy)

    2016-09-20

    We analyze extragalactic extinction profiles derived through gamma-ray burst afterglows, using a dust model specifically constructed on the assumption that dust grains are not immutable but respond, time-dependently, to the local physics. Such a model includes core-mantle spherical particles of mixed chemical composition (silicate core, sp{sup 2}, and sp{sup 3} carbonaceous layers), and an additional molecular component in the form of free-flying polycyclic aromatic hydrocarbons. We fit most of the observed extinction profiles. Failures occur for lines of sight, presenting remarkable rises blueward of the bump. We find a tendency for the carbon chemical structure to become more aliphatic with the galactic activity, and to some extent with increasing redshifts. Moreover, the contribution of the molecular component to the total extinction is more important in younger objects. The results of the fitting procedure (either successes and failures) may be naturally interpreted through an evolutionary prescription based on the carbon cycle in the interstellar medium of galaxies.

  10. Biological correlates of extinction risk in bats.

    Science.gov (United States)

    Jones, Kate E; Purvis, Andy; Gittleman, John L

    2003-04-01

    We investigated patterns and processes of extinction and threat in bats using a multivariate phylogenetic comparative approach. Of nearly 1,000 species worldwide, 239 are considered threatened by the International Union for Conservation of Nature and Natural Resources (IUCN) and 12 are extinct. Small geographic ranges and low wing aspect ratios are independently found to predict extinction risk in bats, which explains 48% of the total variance in IUCN assessments of threat. The pattern and correlates of extinction risk in the two bat suborders are significantly different. A higher proportion (4%) of megachiropteran species have gone extinct in the last 500 years than microchiropteran bats (0.3%), and a higher proportion is currently at risk of extinction (Megachiroptera: 34%; Microchiroptera: 22%). While correlates of microchiropteran extinction risk are the same as in the order as a whole, megachiropteran extinction is correlated more with reproductive rate and less with wing morphology. Bat extinction risk is not randomly distributed phylogenetically: closely related species have more similar levels of threat than would be expected if extinction risk were random. Given the unbalanced nature of the evolutionary diversification of bats, it is probable that the amount of phylogenetic diversity lost if currently threatened taxa disappear may be greater than in other clades with numerically more threatened species.

  11. The ethics of reviving long extinct species.

    Science.gov (United States)

    Sandler, Ronald

    2014-04-01

    There now appears to be a plausible pathway for reviving species that have been extinct for several decades, centuries, or even millennia. I conducted an ethical analysis of de-extinction of long extinct species. I assessed several possible ethical considerations in favor of pursuing de-extinction: that it is a matter of justice; that it would reestablish lost value; that it would create new value; and that society needs it as a conservation last resort. I also assessed several possible ethical arguments against pursuing de-extinction: that it is unnatural; that it could cause animal suffering; that it could be ecologically problematic or detrimental to human health; and that it is hubristic. There are reasons in favor of reviving long extinct species, and it can be ethically acceptable to do so. However, the reasons in favor of pursuing de-extinction do not have to do with its usefulness in species conservation; rather, they concern the status of revived species as scientific and technological achievements, and it would be ethically problematic to promote de-extinction as a significant conservation strategy, because it does not prevent species extinctions, does not address the causes of extinction, and could be detrimental to some species conservation efforts. Moreover, humanity does not have a responsibility or obligation to pursue de-extinction of long extinct species, and reviving them does not address any urgent problem. Therefore, legitimate ecological, political, animal welfare, legal, or human health concerns associated with a de-extinction (and reintroduction) must be thoroughly addressed for it to be ethically acceptable. © 2013 Society for Conservation Biology.

  12. Polarization extinction ratio of the polarization crosstalk caused by point pressure force in the polarization-maintaining fiber

    Science.gov (United States)

    Mukhtubayev, Azamat B.; Aksarin, Stanislav M.; Strigalev, Vladimir E.

    2017-11-01

    A study of the orthogonal polarization modes crosstalk changes in the point of different mechanical actions (pressure force) in the polarization-maintaining fiber with straining elliptical cladding is presented. It was found that by increasing of the pressure force the polarization extinction ratio increases nonlinearly. Also revealed the dependence of the extinction coefficient and the angle between vector of the mechanical action and polarization axes of the test fiber, which leads to change the extinction coefficient variable from -57 dB to -25 dB under the pressure force of 0.7 N. Also it was found that the cross angle of the fiber axes doesn't influence on the extinction ratio value of the mechanical induced polarization crosstalk.

  13. Extinction debt: a challenge for biodiversity conservation.

    Science.gov (United States)

    Kuussaari, Mikko; Bommarco, Riccardo; Heikkinen, Risto K; Helm, Aveliina; Krauss, Jochen; Lindborg, Regina; Ockinger, Erik; Pärtel, Meelis; Pino, Joan; Rodà, Ferran; Stefanescu, Constantí; Teder, Tiit; Zobel, Martin; Steffan-Dewenter, Ingolf

    2009-10-01

    Local extinction of species can occur with a substantial delay following habitat loss or degradation. Accumulating evidence suggests that such extinction debts pose a significant but often unrecognized challenge for biodiversity conservation across a wide range of taxa and ecosystems. Species with long generation times and populations near their extinction threshold are most likely to have an extinction debt. However, as long as a species that is predicted to become extinct still persists, there is time for conservation measures such as habitat restoration and landscape management. Standardized long-term monitoring, more high-quality empirical studies on different taxa and ecosystems and further development of analytical methods will help to better quantify extinction debt and protect biodiversity.

  14. Temporal specificity of extinction in autoshaping.

    Science.gov (United States)

    Drew, Michael R; Yang, Cynthia; Ohyama, Tatsuya; Balsam, Peter D

    2004-07-01

    Three experiments investigated the effects of varying the conditioned stimulus (CS) duration between training and extinction. Ring doves (Streptopelia risoria) were autoshaped on a fixed CS-unconditioned stimulus (US) interval and extinguished with CS presentations that were longer, shorter, or the same as the training duration. During a subsequent test session, the training CS duration was reintroduced. Results suggest that the cessation of responding during an extinction session is controlled by generalization of excitation between the training and extinction CSs and by the number of nonreinforced CS presentations. Transfer of extinction to the training CS is controlled by the similarity between the extinction and training CSs. Extinction learning is temporally specific. (c) 2004 APA, all rights reserved

  15. Open-field exposure facilitates consummatory extinction.

    Science.gov (United States)

    Justel, Nadia; Psyrdellis, Mariana; Pautassi, Ricardo M

    2016-12-07

    During extinction, the organism learns that a conditioned stimulus or a conditioned response is no longer associated with an unconditioned stimulus, and as a consequence, a decrement in the response is presented. The exposure to novel situations (e.g. exploration of a novel open field) has been used widely to modulate (i.e. either enhance or deteriorate) learning and memory. The aim of the present study was to test whether open-field exposure could modulate consummatory extinction. The results indicated that open-field exposure accelerated the extinction response (i.e. experimental animals provided novelty exposure had lower consummatory behavior than control animals) when applied before - but not after - the first extinction trial, or when applied before the second extinction trial. The results suggest that environmental treatments such as novelty exposure provide a valuable, nonpharmacological alternative to potentially modulate extinction processes.

  16. Light extinction in the atmosphere

    International Nuclear Information System (INIS)

    Laulainen, N.

    1992-06-01

    Atmospheric aerosol particles originating from natural sources, such as volcanos and sulfur-bearing gas emissions from the oceans, and from human sources, such as sulfur emissions from fossil fuel combustion and biomass burning, strongly affect visual air quality and are suspected to significantly affect radiative climate forcing of the planet. During the daytime, aerosols obscure scenic vistas, while at night they diminish our ability to observe stellar objects. Scattering of light is the main means by which aerosols attenuate and redistribute light in the atmosphere and by which aerosols can alter and reduce visibility and potentially modify the energy balance of the planet. Trends and seasonal variability of atmospheric aerosol loading, such as column-integrated light extinction or optical depth, and how they may affect potential climate change have been difficult to quantify because there have been few observations made of important aerosol optical parameters, such as optical depth, over the globe and over time and often these are of uneven quality. To address questions related to possible climate change, there is a pressing need to acquire more high-quality aerosol optical depth data. Extensive deployment of improved solar radiometers over the next few years will provide higher-quality extinction data over a wider variety of locations worldwide. An often overlooked source of turbidity data, however, is available from astronomical observations, particularly stellar photoelectric photometry observations. With the exception of the Project ASTRA articles published almost 20 years ago, few of these data ever appear in the published literature. This paper will review the current status of atmospheric extinction observations, as highlighted by the ASTRA work and augmented by more recent solar radiometry measurements

  17. Sexual selection protects against extinction.

    Science.gov (United States)

    Lumley, Alyson J; Michalczyk, Łukasz; Kitson, James J N; Spurgin, Lewis G; Morrison, Catriona A; Godwin, Joanne L; Dickinson, Matthew E; Martin, Oliver Y; Emerson, Brent C; Chapman, Tracey; Gage, Matthew J G

    2015-06-25

    Reproduction through sex carries substantial costs, mainly because only half of sexual adults produce offspring. It has been theorized that these costs could be countered if sex allows sexual selection to clear the universal fitness constraint of mutation load. Under sexual selection, competition between (usually) males and mate choice by (usually) females create important intraspecific filters for reproductive success, so that only a subset of males gains paternity. If reproductive success under sexual selection is dependent on individual condition, which is contingent to mutation load, then sexually selected filtering through 'genic capture' could offset the costs of sex because it provides genetic benefits to populations. Here we test this theory experimentally by comparing whether populations with histories of strong versus weak sexual selection purge mutation load and resist extinction differently. After evolving replicate populations of the flour beetle Tribolium castaneum for 6 to 7 years under conditions that differed solely in the strengths of sexual selection, we revealed mutation load using inbreeding. Lineages from populations that had previously experienced strong sexual selection were resilient to extinction and maintained fitness under inbreeding, with some families continuing to survive after 20 generations of sib × sib mating. By contrast, lineages derived from populations that experienced weak or non-existent sexual selection showed rapid fitness declines under inbreeding, and all were extinct after generation 10. Multiple mutations across the genome with individually small effects can be difficult to clear, yet sum to a significant fitness load; our findings reveal that sexual selection reduces this load, improving population viability in the face of genetic stress.

  18. Transport Coefficients of Fluids

    CERN Document Server

    Eu, Byung Chan

    2006-01-01

    Until recently the formal statistical mechanical approach offered no practicable method for computing the transport coefficients of liquids, and so most practitioners had to resort to empirical fitting formulas. This has now changed, as demonstrated in this innovative monograph. The author presents and applies new methods based on statistical mechanics for calculating the transport coefficients of simple and complex liquids over wide ranges of density and temperature. These molecular theories enable the transport coefficients to be calculated in terms of equilibrium thermodynamic properties, and the results are shown to account satisfactorily for experimental observations, including even the non-Newtonian behavior of fluids far from equilibrium.

  19. Comment on the extinct paradox

    International Nuclear Information System (INIS)

    Levine, D.M.

    1983-11-01

    The extinction paradox is a contradiction between geometrical optics results which predict that at high frequencies the scattering cross section of an object should equal its geometrical cross section and rigorous scattering theory which shows that at high frequencies the scattering cross section approaches twice the geometrical cross section of the object. Confusion about the reason for this paradox persists today even though the nature of the paradox was correctly identified many years ago by Brillouin. The resolution of the paradox is restated and illustrated with an example, and then the implications to the interpretation of scattering cross sections are identified

  20. Presidential address: distinction or extinction.

    Science.gov (United States)

    Pressman, Barry D

    2008-10-01

    Despite its continuing scientific successes in imaging, radiology as a specialty is faced with a very difficult and competitive environment. Nonradiologists are more and more interested in vertically integrating imaging into their practices, while teleradiology and picture archiving and communication systems are resulting in the greater isolation of radiologists. Commoditization is a realistic and devastating threat to the survival and professionalism of the specialty. To remain viable as a specialty, radiologists must elevate their practice by subspecializing, becoming more involved with clinical care, and actively interacting with patients and referring clinicians. Distinction will prevent extinction.

  1. Methylphenidate enhances extinction of contextual fear

    OpenAIRE

    Abraham, Antony D.; Cunningham, Christopher L.; Lattal, K. Matthew

    2012-01-01

    Methylphenidate (MPH, Ritalin) is a norepinephrine and dopamine transporter blocker that is widely used in humans for treatment of attention deficit disorder and narcolepsy. Although there is some evidence that targeted microinjections of MPH may enhance fear acquisition, little is known about the effect of MPH on fear extinction. Here, we show that MPH, administered before or immediately following extinction of contextual fear, will enhance extinction retention in C57BL/6 mice. Animals that ...

  2. Are Humans too Numerous to Become Extinct?

    OpenAIRE

    Cairns, John

    2009-01-01

    Some claim that humans are too numerous to become extinct. However, passenger pigeon, once the most numerous birds on the planet, are now extinct. For years, humankind has been damaging its habitat, discharging toxic chemicals into the environment, and having harmful effects on agricultural productivity due to climate change. Humankind s extinction depends on the continuation of various human activities including economic growth, addiction to fossil fuel, over consumption, overpopulation, oc...

  3. The Astronomical Pulse of Global Extinction Events

    Directory of Open Access Journals (Sweden)

    David F.V. Lewis

    2006-01-01

    Full Text Available The linkage between astronomical cycles and the periodicity of mass extinctions is reviewed and discussed. In particular, the apparent 26 million year cycle of global extinctions may be related to the motion of the solar system around the galaxy, especially perpendicular to the galactic plane. The potential relevance of Milankovitch cycles is also explored in the light of current evidence for the possible causes of extinction events over a geological timescale.

  4. Long-term maintenance of immediate or delayed extinction is determined by the extinction-test interval

    OpenAIRE

    Johnson, Justin S.; Escobar, Martha; Kimble, Whitney L.

    2010-01-01

    Short acquisition-extinction intervals (immediate extinction) can lead to either more or less spontaneous recovery than long acquisition-extinction intervals (delayed extinction). Using rat subjects, we observed less spontaneous recovery following immediate than delayed extinction (Experiment 1). However, this was the case only if a relatively long extinction-test interval was used; a relatively short extinction-test interval yielded the opposite result (Experiment 2). Previous data appear co...

  5. Intergalactic extinction and the deceleration parameter

    International Nuclear Information System (INIS)

    Meinel, R.

    1981-01-01

    The deceleration parameter q 0 is calculated from the relation between apparent magnitudes m of the brightest galaxies in clusters and their redshifts z considering an intergalactic extinction. The calculation is valid for a Friedman universe, homogeneously filled with dust grains, assuming the extinction to be 0.5 mag at z = 1 and aΛ -1 -law of extinction (according to Oleak and Schmidt 1976). Using the m,z-values of Kristian, Sandage, and Westphal (1978) a formal value of q 0 approximately 2.1 is obtained instead of q 0 approximately 1.6 without consideration of intergalactic extinction. (author)

  6. Interstellar extinction in the Large Magellanic Cloud

    International Nuclear Information System (INIS)

    Nandy, K.; Morgan, D.H.; Willis, A.J.; Wilson, R.; Gondhalekar, P.M.; Houziaux, L.

    1980-01-01

    Recent UV observations together with complementary visible data of several reddened and comparison stars of similar spectral types in the Large Magellanic Cloud have been used to study the interstellar extinction in that galaxy. Most of the reddened stars studied here are located within 2 0 of 30 Doradus and show remarkably high extinction in the far UV, suggesting a large abundance of small particles. From the optical wavelength to 2,600 A the normalised extinction curves of the LMC stars are similar to the mean galactic extinction law. (author)

  7. Mass extinctions vs. uniformitarianism in biological evolution

    Energy Technology Data Exchange (ETDEWEB)

    Bak, P.; Paczuski, M.

    1995-12-31

    It is usually believed that Darwin`s theory leads to a smooth gradual evolution, so that mass extinctions must be caused by external shocks. However, it has recently been argued that mass extinctions arise from the intrinsic dynamics of Darwinian evolution. Species become extinct when swept by intermittent avalanches propagating through the global ecology. These ideas are made concrete through studies of simple mathematical models of co-evolving species. The models exhibit self-organized criticality and describe some general features of the extinction pattern in the fossil record.

  8. The primary extinction and static Debye-Waller factor in the characterization of textured nickel by X-ray diffraction

    International Nuclear Information System (INIS)

    Kryshtab, T.; Palacios G, J.; Cadena A, A.; Kryvko, A.

    2015-01-01

    The texture analysis using X-ray diffraction (XRD) implies measurement of pole figures (Pf) from the diffracted intensities considering the model of kinematical dispersion. The extinction phenomenon results in a decrease of diffracted intensity and that in turn in a decrease of pole densities (Pds). The phenomenon appears in the kinematical theory of XRD as the primary extinction and the secondary extinction to characterize the loss of intensity of kinematical dispersion. In turn, the static Debye-Waller factor is an integral characteristic of defects in crystals that is introduced in the kinematical theory of XRD and also is used in dynamical theory of XRD. In this work the correlation between the primary extinction coefficient and the static Debye-Waller factor in the case of textured nickel was determined. The value of static Debye-Waller factor was determined from the value of the calculated primary extinction coefficient. For the evaluation there were used Pds in the maxima of Pf obtained for 111 and 200 reflections with Mo Kα radiation, and the Pds in the maxima of Pf obtained for the first and second orders of these reflections with Cu Kα and Co Kα radiations. There were calculated the dislocation densities in grains using values of static Debye-Waller factor and the extinction coefficients. The dislocation densities calculated from these two characteristics are practically equal. (Author)

  9. Anatomical physiology of spatial extinction.

    Science.gov (United States)

    Ciçek, Metehan; Gitelman, Darren; Hurley, Robert S E; Nobre, Anna; Mesulam, Marsel

    2007-12-01

    Neurologically intact volunteers participated in a functional magnetic resonance imaging experiment that simulated the unilateral (focal) and bilateral (global) stimulations used to elicit extinction in patients with hemispatial neglect. In peristriate areas, attentional modulations were selectively sensitive to contralaterally directed attention. A higher level of mapping was observed in the intraparietal sulcus (IPS), inferior parietal lobule (IPL), and inferior frontal gyrus (IFG). In these areas, there was no distinction between contralateral and ipsilateral focal attention, and the need to distribute attention globally led to greater activity than either focal condition. These physiological characteristics were symmetrically distributed in the IPS and IFG, suggesting that the effects of unilateral lesions in these 2 areas can be compensated by the contralateral hemisphere. In the IPL, the greater activation by the bilateral attentional mode was seen only in the right hemisphere. Its contralateral counterpart displayed equivalent activations when attention was distributed to the right, to the left, or bilaterally. Within the context of this experiment, the IPL of the right hemisphere emerged as the one area where unilateral lesions can cause the most uncompensated and selective impairment of global attention (without interfering with unilateral attention to either side), giving rise to the phenomenon of extinction.

  10. Constraints on Enhanced Extinction Resulting from Extinction Treatment in the Presence of an Added Excitor

    Science.gov (United States)

    Urcelay, Gonzalo P.; Lipatova, Olga; Miller, Ralph R.

    2009-01-01

    Three Pavlovian fear conditioning experiments with rats as subjects explored the effect of extinction in the presence of a concurrent excitor. Our aim was to explore this particular treatment, documented in previous studies to deepen extinction, with novel control groups to shed light on the processes involved in extinction. Relative to subjects…

  11. Timing of extinction relative to acquisition: A parametric analysis of fear extinction in humans

    NARCIS (Netherlands)

    Norrholm, S.D.; Vervliet, B.; Jovanovic, T.; Boshoven, W.; Myers, K.M.; Davis, M.; Rothbaum, B.O.; Duncan, E.J.

    2008-01-01

    Fear extinction is a reduction in conditioned fear following repeated exposure to the feared cue in the absence of any aversive event. Extinguished fear often reappears after extinction through spontaneous recovery. Animal studies suggest that spontaneous recovery can be abolished if extinction

  12. Evidence and mapping of extinction debts for global forest-dwelling reptiles, amphibians and mammals

    Science.gov (United States)

    Chen, Youhua; Peng, Shushi

    2017-03-01

    Evidence of extinction debts for the global distributions of forest-dwelling reptiles, mammals and amphibians was tested and the debt magnitude was estimated and mapped. By using different correlation tests and variable importance analysis, the results showed that spatial richness patterns for the three forest-dwelling terrestrial vertebrate groups had significant and stronger correlations with past forest cover area and other variables in the 1500 s, implying the evidence for extinction debts. Moreover, it was likely that the extinction debts have been partially paid, given that their global richness patterns were also significantly correlated with contemporary forest variables in the 2000 s (but the absolute magnitudes of the correlation coefficients were usually smaller than those calculated for historical forest variables). By utilizing species-area relationships, spatial extinction-debt magnitudes for the three vertebrate groups at the global scale were estimated and the hotspots of extinction debts were identified. These high-debt hotspots were generally situated in areas that did not spatially overlap with hotspots of species richness or high extinction-risk areas based on IUCN threatened status to a large extent. This spatial mismatch pattern suggested that necessary conservation efforts should be directed toward high-debt areas that are still overlooked.

  13. Extinction of polarized light in ferrofluids with different magnetic particle concentrations

    International Nuclear Information System (INIS)

    Socoliuc, V.; Popescu, L.B.

    2012-01-01

    The magnetic field intensity and nanoparticle concentration dependence of the polarized light extinction in a ferrofluid made of magnetite particles stabilized with technical grade oleic acid dispersed in transformer oil was experimentally investigated. The magnetically induced optical anisotropy, i.e. the dichroism divided by concentration, was found to decrease with increasing sample concentration from 2% to 8%. The magnetically induced change in the optical extinction of light polarized at 54.74 o with respect to the magnetic field direction was found to be positive for the less concentrated sample (2%) and negative for the samples with 4% and 8% magnetic nanoparticle concentrations, the more negative the higher the concentration and field intensity. Based on the theoretically proven fact that the particle orientation mechanism has no effect on the extinction of light polarized at 54.74 o with respect to the field direction, we analyzed the experimental findings in the frames of the agglomeration and long-range pair correlations theories for the magnetically induced optical anisotropy in ferrofluids. We developed a theoretical model in the approximation of single scattering for the optical extinction coefficient of a ferrofluid with magnetically induced particle agglomeration. The model predicts the existence of a polarization independent component of the optical extinction coefficient that is experimentally measurable at 54.74 o polarization angle. The change in the optical extinction of light polarized at 54.74 o is positive if only the formation of straight n-particle chains is considered and may become negative in the hypothesis that the longer chains degenerate to more isotropic structures (polymer-like coils, globules or bundles of chains). The model for the influence on the light absorption of the long-range pair correlations, published elsewhere, predicts that the change in the optical extinction of light polarized at 54.74 o is always negative, the more

  14. Long-Term Maintenance of Immediate or Delayed Extinction Is Determined by the Extinction-Test Interval

    Science.gov (United States)

    Johnson, Justin S.; Escobar, Martha; Kimble, Whitney L.

    2010-01-01

    Short acquisition-extinction intervals (immediate extinction) can lead to either more or less spontaneous recovery than long acquisition-extinction intervals (delayed extinction). Using rat subjects, we observed less spontaneous recovery following immediate than delayed extinction (Experiment 1). However, this was the case only if a relatively…

  15. On the expected relationship between inbreeding, fitness, and extinction

    Directory of Open Access Journals (Sweden)

    Couvet Denis

    2006-06-01

    Full Text Available Abstract We assessed the expected relationship between the level and the cost of inbreeding, measured either in terms of fitness, inbreeding depression or probability of extinction. First, we show that the assumption of frequent, slightly deleterious mutations do agree with observations and experiments, on the contrary to the assumption of few, moderately deleterious mutations. For the same inbreeding coefficient, populations can greatly differ in fitness according to the following: (i population size; larger populations show higher fitness (ii the history of population size; in a population that recovers after a bottleneck, higher inbreeding can lead to higher fitness and (iii population demography; population growth rate and carrying capacity determine the relationship between inbreeding and extinction. With regards to the relationship between inbreeding depression and inbreeding coefficient, the population size that minimizes inbreeding depression depends on the level of inbreeding: inbreeding depression can even decrease when population size increases. It is therefore clear that to infer the costs of inbreeding, one must know both the history of inbreeding (e.g. past bottlenecks and population demography.

  16. Discharge Coefficient of Rectangular Short-Crested Weir with Varying Slope Coefficients

    Directory of Open Access Journals (Sweden)

    Yuejun Chen

    2018-02-01

    Full Text Available Rectangular short-crested weirs are widely used for simple structure and high discharge capacity. As one of the most important and influential factors of discharge capacity, side slope can improve the hydraulic characteristics of weirs at special conditions. In order to systemically study the effects of upstream and downstream slope coefficients S1 and S2 on overflow discharge coefficient in a rectangular short-crested weir the Volume of Fluid (VOF method and the Renormalization Group (RNG κ-ε turbulence model are used. In this study, the slope coefficient ranges from V to 3H:1V and each model corresponds to five total energy heads of H0 ranging from 8.0 to 24.0 cm. Comparisons of discharge coefficients and free surface profiles between simulated and laboratory results display a good agreement. The simulated results show that the difference of discharge coefficients will decrease with upstream slopes and increase with downstream slopes as H0 increases. For a given H0, the discharge coefficient has a convex parabolic relation with S1 and a piecewise linearity relation with S2. The maximum discharge coefficient is always obtained at S2 = 0.8. There exists a difference between upstream and downstream slope coefficients in the influence range of free surface curvatures. Furthermore, a proposed discharge coefficient equation by nonlinear regression is a function of upstream and downstream slope coefficients.

  17. Can Parallelingualism Save Norwegian from Extinction?

    Science.gov (United States)

    Linn, Andrew R.

    2010-01-01

    Language extinction is one of the most pressing issues in linguistics today, and the literature is full of discussion about how to combat it. Statements that Norwegian is amongst the languages that are already extinct are merely examples of a widespread tendency in the literature towards erroneous information about Norwegian. Nonetheless, there is…

  18. Evaluating herbivore extinction probabilities in Addo Elephant ...

    African Journals Online (AJOL)

    Abstract. Population extinction evaluations, based on the model developed by Dennis et al. (1991) that did not take density dependence into account and that were based on census data, suggest that many of the herbivore species in Addo Elephant National Park (AENP) are vulnerable to local extinction. As a result of low ...

  19. Extinction-Induced Variability in Human Behavior

    Science.gov (United States)

    Kinloch, Jennifer M.; Foster, T. Mary; McEwan, James S. A.

    2009-01-01

    Participants earned points by pressing a computer space bar (Experiment 1) or forming rectangles on the screen with the mouse (Experiment 2) under differential-reinforcement-of-low-rate schedules, followed by extinction. Variability in interresponse time (the contingent dimension) increased during extinction, as for Morgan and Lee (1996);…

  20. Context and Behavioral Processes in Extinction

    Science.gov (United States)

    Bouton, Mark E.

    2004-01-01

    This article provides a selective review and integration of the behavioral literature on Pavlovian extinction. The first part reviews evidence that extinction does not destroy the original learning, but instead generates new learning that is especially context-dependent. The second part examines insights provided by research on several related…

  1. Current extinction rates of reptiles and amphibians.

    Science.gov (United States)

    Alroy, John

    2015-10-20

    There is broad concern that a mass extinction of amphibians and reptiles is now underway. Here I apply an extremely conservative Bayesian method to estimate the number of recent amphibian and squamate extinctions in nine important tropical and subtropical regions. The data stem from a combination of museum collection databases and published site surveys. The method computes an extinction probability for each species by considering its sighting frequency and last sighting date. It infers hardly any extinction when collection dates are randomized and it provides underestimates when artificial extinction events are imposed. The method also appears to be insensitive to trends in sampling; therefore, the counts it provides are absolute minimums. Extinctions or severe population crashes have accumulated steadily since the 1970s and 1980s, and at least 3.1% of frog species have already disappeared. Based on these data and this conservative method, the best estimate of the global grand total is roughly 200 extinctions. Consistent with previous results, frog losses are heavy in Latin America, which has been greatly affected by the pathogenic chytrid fungus Batrachochytrium dendrobatidis. Extinction rates are now four orders-of-magnitude higher than background, and at least another 6.9% of all frog species may be lost within the next century, even if there is no acceleration in the growth of environmental threats.

  2. Interstellar extinction in the Large Magellanic Cloud

    International Nuclear Information System (INIS)

    Nandy, K.; Morgan, D.H.; Willis, A.J.; Wilson, R.; Gondhalekar, P.M.

    1981-01-01

    A systematic investigation of interstellar extinction in the ultraviolet as a function of position in the Large Magellanic Cloud has been made from an enlarged sample of reddened and comparison stars distributed throughout the cloud. Except for one star SK-69-108, the most reddened star of our sample, the shape of the extinction curves for the LMC stars do not show significant variations. All curves show an increase in extinction towards 2200 A, but some have maxima near 2200 A, some near 1900 A. It has been shown that the feature of the extinction curve near 1900 A is caused by the mismatch of the stellar F III 1920 A feature. The strength of this 1920 A feature as a function of luminosity and spectral type has been determined. The extinction curves have been corrected for the mismatch of the 1920 feature and a single mean extinction curve for the LMC normalized to Asub(V) = 0 and Esub(B-V) = 1 is presented. For the same value of Esub(B-V) the LMC stars show the 2200 A feature weaker by a factor 2 as compared with the galactic stars. Higher extinction shortward of 2000 A in the LMC extinction curves than that in our Galaxy, as reported in earlier papers, is confirmed. (author)

  3. Enhancing Divergent Search through Extinction Events

    DEFF Research Database (Denmark)

    Lehman, Joel; Miikkulainen, Risto

    2015-01-01

    for the capacity to evolve. This hypothesis is tested through experiments in two evolutionary robotics domains. The results show that combining extinction events with divergent search increases evolvability, while combining them with convergent search offers no similar benefit. The conclusion is that extinction...

  4. Mass extinctions: Ecological selectivity and primary production

    Science.gov (United States)

    Rhodes, Melissa Clark; Thayer, Charles W.

    1991-09-01

    If mass extinctions were caused by reduced primary productivity, then extinctions should be concentrated among animals with starvation-susceptible feeding modes, active lifestyles, and high-energy budgets. The stratigraphic ranges (by stage) of 424 genera of bivalves and 309 genera of articulate brachiopods suggest that there was an unusual reduction of primary productivity at the Cretaceous/Tertiary (K/T) boundary extinction. For bivalves at the K/T, there were (1) selective extinction of suspension feeders and other susceptible trophic categories relative to deposit feeders and other resistant categories, and (2) among suspension feed-ers, selective extinction of bivalves with active locomotion. During the Permian-Triassic (P/Tr) extinction and Jurassic background time, extinction rates among suspension feeders were greater for articulate brachiopods than for bivalves. But during the K/T event, extinction rates of articulates and suspension-feeding bivalves equalized, possibly because the low-energy budgets of articulates gave them an advantage when food was scarce.

  5. Defining the period of moa extinction

    International Nuclear Information System (INIS)

    Anderson, A.

    2000-01-01

    Few aspects of New Zealand's prehistory have engaged scientific and public attention so consistently as two interlinked questions of moa extinction; when did moas become extinct and why? Answers offered over the last 160 years have run the gamut from chronological antiquity by evolutionary senescence, to within the 19th century Maori and European disturbance. (author)

  6. Immediate extinction promotes the return of fear.

    Science.gov (United States)

    Merz, Christian J; Hamacher-Dang, Tanja C; Wolf, Oliver T

    2016-05-01

    Accumulating evidence indicates that immediate extinction is less effective than delayed extinction in attenuating the return of fear. This line of fear conditioning research impacts the proposed onset of psychological interventions after threatening situations. In the present study, forty healthy men were investigated in a differential fear conditioning paradigm with fear acquisition in context A, extinction in context B, followed by retrieval testing in both contexts 24h later to test fear renewal. Differently coloured lights served as conditioned stimuli (CS): two CS (CS+) were paired with an electrical stimulation that served as unconditioned stimulus, the third CS was never paired (CS-). Extinction took place immediately after fear acquisition or 24h later. One CS+ was extinguished whereas the second CS+ remained unextinguished to control for different time intervals between fear acquisition and retrieval testing. Immediate extinction led to larger skin conductance responses during fear retrieval to both the extinguished and unextinguished CS relative to the CS-, indicating a stronger return of fear compared to delayed extinction. Taken together, immediate extinction is less potent than delayed extinction and is associated with a stronger renewal effect. Thus, the time-point of psychological interventions relative to the offset of threatening situations needs to be carefully considered to prevent relapses. Copyright © 2016 Elsevier Inc. All rights reserved.

  7. Infrared light extinction by charged dielectric core-coat particles

    OpenAIRE

    Thiessen, Elena; Heinisch, Rafael L.; Bronold, Franz X.; Fehske, Holger

    2014-01-01

    We study the effect of surplus electrons on the infrared extinction of dielectric particles with a core-coat structure and propose to use it for an optical measurement of the particle charge in a dusty plasma. The particles consist of an inner core with negative and an outer coat with positive electron affinity. Both the core and the coat give rise to strong transverse optical phonon resonances, leading to anomalous light scattering in the infrared. Due to the radial profile of the electron a...

  8. Mass extinction in poorly known taxa.

    Science.gov (United States)

    Régnier, Claire; Achaz, Guillaume; Lambert, Amaury; Cowie, Robert H; Bouchet, Philippe; Fontaine, Benoît

    2015-06-23

    Since the 1980s, many have suggested we are in the midst of a massive extinction crisis, yet only 799 (0.04%) of the 1.9 million known recent species are recorded as extinct, questioning the reality of the crisis. This low figure is due to the fact that the status of very few invertebrates, which represent the bulk of biodiversity, have been evaluated. Here we show, based on extrapolation from a random sample of land snail species via two independent approaches, that we may already have lost 7% (130,000 extinctions) of the species on Earth. However, this loss is masked by the emphasis on terrestrial vertebrates, the target of most conservation actions. Projections of species extinction rates are controversial because invertebrates are essentially excluded from these scenarios. Invertebrates can and must be assessed if we are to obtain a more realistic picture of the sixth extinction crisis.

  9. Assessing Extinction Risk: Integrating Genetic Information

    Directory of Open Access Journals (Sweden)

    Jason Dunham

    1999-06-01

    Full Text Available Risks of population extinction have been estimated using a variety of methods incorporating information from different spatial and temporal scales. We briefly consider how several broad classes of extinction risk assessments, including population viability analysis, incidence functions, and ranking methods integrate information on different temporal and spatial scales. In many circumstances, data from surveys of neutral genetic variability within, and among, populations can provide information useful for assessing extinction risk. Patterns of genetic variability resulting from past and present ecological and demographic events, can indicate risks of extinction that are otherwise difficult to infer from ecological and demographic analyses alone. We provide examples of how patterns of neutral genetic variability, both within, and among populations, can be used to corroborate and complement extinction risk assessments.

  10. Climate predictors of late quaternary extinctions

    DEFF Research Database (Denmark)

    Nogués-Bravo, David; Ohlemüller, Ralf; Batra, Persaram

    2010-01-01

    Between 50,000 and 3,000 years before present (BP) 65% of mammal genera weighing over 44 kg went extinct, together with a lower proportion of small mammals. Why species went extinct in such large numbers is hotly debated. One of the arguments proposes that climate changes underlie Late Quaternary...... extinctions, but global quantitative evidence for this hypothesis is still lacking. We test the potential role of global climate change on the extinction of mammals during the Late Quaternary. Our results suggest that continents with the highest climate footprint values, in other words, with climate changes...... of greater magnitudes during the Late Quaternary, witnessed more extinctions than continents with lower climate footprint values, with the exception of South America. Our results are consistent across species with different body masses, reinforcing the view that past climate changes contributed to global...

  11. A phantom extinction? New insights into extinction dynamics of the Don-hare Lepus tanaiticus.

    Science.gov (United States)

    Prost, S; Knapp, M; Flemmig, J; Hufthammer, A K; Kosintsev, P; Stiller, M; Hofreiter, M

    2010-09-01

    The Pleistocene to Holocene transition was accompanied by a worldwide extinction event affecting numerous mammalian species. Several species such as the woolly mammoth and the giant deer survived this extinction wave, only to go extinct a few thousand years later during the Holocene. Another example for such a Holocene extinction is the Don-hare, Lepus tanaiticus, which inhabited the Russian plains during the late glacial. After being slowly replaced by the extant mountain hare (Lepus timidus), it eventually went extinct during the middle Holocene. Here, we report the phylogenetic relationship of L. tanaiticus and L. timidus based on a 339-basepair (bp) fragment of the mitochondrial D-loop. Phylogenetic tree- and network reconstructions do not support L. tanaiticus and L. timidus being different species. Rather, we suggest that the two taxa represent different morphotypes of a single species and the extinction of 'L. tanaiticus' represents the disappearance of a local morphotype rather than the extinction of a species.

  12. Aerosol characteristics inversion based on the improved lidar ratio profile with the ground-based rotational Raman-Mie lidar

    Science.gov (United States)

    Ji, Hongzhu; Zhang, Yinchao; Chen, Siying; Chen, He; Guo, Pan

    2018-06-01

    An iterative method, based on a derived inverse relationship between atmospheric backscatter coefficient and aerosol lidar ratio, is proposed to invert the lidar ratio profile and aerosol extinction coefficient. The feasibility of this method is investigated theoretically and experimentally. Simulation results show the inversion accuracy of aerosol optical properties for iterative method can be improved in the near-surface aerosol layer and the optical thick layer. Experimentally, as a result of the reduced insufficiency error and incoherence error, the aerosol optical properties with higher accuracy can be obtained in the near-surface region and the region of numerical derivative distortion. In addition, the particle component can be distinguished roughly based on this improved lidar ratio profile.

  13. Development of multiple scattering lidar to retrieve cloud extinction and size information

    International Nuclear Information System (INIS)

    Kim, Dukhyeon; Cheong, Hai Du; Kim, Young Gi; Park, Sun Ho

    2008-01-01

    Traditional Mie scattering cloud lidar have some limitations because of multiple scattering effects. Because this multiple scattering effects induce depolarization of spherical particle and enhancement of extinction coefficient. We cannot measure the phase of water with depolarization lidar, and also cannot measure the extinction coefficient with single FOV(Field Of View)Mie cloud lidar system. In the study, we have developed a multiple field of view Mie cloud liar system which can give many information about the cloud droplet such as cloud effective size, cloud number density, extinction coefficient of cloud, and phase of water through the correction of multiple scattering effects. For this purpose, we have developed a multiple field of view lidar system which composed of 32 different pinholes. Figure 1 shows the schematic diagram and picture of pinholes which start from 100μm to 8mm. Pihole is located at the focal plane of the parabolic mirror, in this case the minimum FOV is 67μrad, maximum FOV is 5.3 mrad. Figure 2 shows Monte Carlo simulation of the multiple scattering photons vs. cloud depth. In this calculation we assumed that wavelength normalized aerosol size(x)is 100, and density of cloud (extinction efficiency)is 0.01m"-1". By measuring FOV dependent signals and aerosol extinction coefficient we can extract effective droplet size through following equations. Here θ"d"is aerosol effective size, and z"j", f, Θ(z)are height, aerosol density dependent function, and angular size of lidar signal at the height z. Finally. f(z)depends on the light mean free path and number of scattering

  14. Trophic redundancy reduces vulnerability to extinction cascades.

    Science.gov (United States)

    Sanders, Dirk; Thébault, Elisa; Kehoe, Rachel; Frank van Veen, F J

    2018-03-06

    Current species extinction rates are at unprecedentedly high levels. While human activities can be the direct cause of some extinctions, it is becoming increasingly clear that species extinctions themselves can be the cause of further extinctions, since species affect each other through the network of ecological interactions among them. There is concern that the simplification of ecosystems, due to the loss of species and ecological interactions, increases their vulnerability to such secondary extinctions. It is predicted that more complex food webs will be less vulnerable to secondary extinctions due to greater trophic redundancy that can buffer against the effects of species loss. Here, we demonstrate in a field experiment with replicated plant-insect communities, that the probability of secondary extinctions is indeed smaller in food webs that include trophic redundancy. Harvesting one species of parasitoid wasp led to secondary extinctions of other, indirectly linked, species at the same trophic level. This effect was markedly stronger in simple communities than for the same species within a more complex food web. We show that this is due to functional redundancy in the more complex food webs and confirm this mechanism with a food web simulation model by highlighting the importance of the presence and strength of trophic links providing redundancy to those links that were lost. Our results demonstrate that biodiversity loss, leading to a reduction in redundant interactions, can increase the vulnerability of ecosystems to secondary extinctions, which, when they occur, can then lead to further simplification and run-away extinction cascades. Copyright © 2018 the Author(s). Published by PNAS.

  15. THE MID-INFRARED EXTINCTION LAW IN THE LARGE MAGELLANIC CLOUD

    Energy Technology Data Exchange (ETDEWEB)

    Gao, Jian; Jiang, B. W.; Xue, M. Y. [Department of Astronomy, Beijing Normal University, Beijing 100875 (China); Li, Aigen, E-mail: jiangao@bnu.edu.cn, E-mail: bjiang@bnu.edu.cn, E-mail: lia@missouri.edu [Department of Physics and Astronomy, University of Missouri, Columbia, MO 65211 (United States)

    2013-10-10

    Based on photometric data from the Spitzer/SAGE survey, using red giants as extinction tracers, the mid-infrared (MIR) extinction laws in the Large Magellanic Cloud (LMC) are derived for the first time in the form of A{sub λ}/A{sub K{sub S}}. This quantity refers to the extinction in the four Infrared Array Camera (IRAC) bands (i.e., [3.6], [4.5], [5.8], and [8.0] μm) relative to the Two Micron All Sky Survey K{sub S} band at 2.16 μm. We obtain the near-infrared extinction coefficient to be E(J – H)/E(H – K{sub S} ) ≈ 1.29 ± 0.04 and E(J – K{sub S} )/E(H – K{sub S} ) ≈ 1.94 ± 0.04. The wavelength dependence of the MIR extinction A{sub λ}/A{sub K{sub S}} in the LMC varies from one sightline to another. The overall mean MIR extinction is A{sub [3.6]}/A{sub K{sub S}}∼0.72±0.03, A{sub [4.5]}/A{sub K{sub S}}∼0.94±0.03, A{sub [5.8]}/A{sub K{sub S}}∼0.58±0.04, and A{sub [8.0]}/A{sub K{sub S}}∼0.62±0.05. Except for the extinction in the IRAC [4.5] μm band, which may be contaminated by the 4.6 μm CO gas absorption of red giants used to trace LMC extinction, the extinction in the other three IRAC bands show a flat curve, close to the Milky Way R{sub V} = 5.5 model extinction curve, where R{sub V} is the optical total-to-selective extinction ratio. The possible systematic bias caused by the correlated uncertainties of K{sub S} – λ and J – K{sub S} is explored in terms of Monte Carlo simulations. We find that this bias could lead to an overestimation of A{sub λ}/A{sub K{sub S}} in the MIR.

  16. THE MID-INFRARED EXTINCTION LAW IN THE LARGE MAGELLANIC CLOUD

    International Nuclear Information System (INIS)

    Gao, Jian; Jiang, B. W.; Xue, M. Y.; Li, Aigen

    2013-01-01

    Based on photometric data from the Spitzer/SAGE survey, using red giants as extinction tracers, the mid-infrared (MIR) extinction laws in the Large Magellanic Cloud (LMC) are derived for the first time in the form of A λ /A K S . This quantity refers to the extinction in the four Infrared Array Camera (IRAC) bands (i.e., [3.6], [4.5], [5.8], and [8.0] μm) relative to the Two Micron All Sky Survey K S band at 2.16 μm. We obtain the near-infrared extinction coefficient to be E(J – H)/E(H – K S ) ≈ 1.29 ± 0.04 and E(J – K S )/E(H – K S ) ≈ 1.94 ± 0.04. The wavelength dependence of the MIR extinction A λ /A K S in the LMC varies from one sightline to another. The overall mean MIR extinction is A [3.6] /A K S ∼0.72±0.03, A [4.5] /A K S ∼0.94±0.03, A [5.8] /A K S ∼0.58±0.04, and A [8.0] /A K S ∼0.62±0.05. Except for the extinction in the IRAC [4.5] μm band, which may be contaminated by the 4.6 μm CO gas absorption of red giants used to trace LMC extinction, the extinction in the other three IRAC bands show a flat curve, close to the Milky Way R V = 5.5 model extinction curve, where R V is the optical total-to-selective extinction ratio. The possible systematic bias caused by the correlated uncertainties of K S – λ and J – K S is explored in terms of Monte Carlo simulations. We find that this bias could lead to an overestimation of A λ /A K S in the MIR

  17. Immediate extinction causes a less durable loss of performance than delayed extinction following either fear or appetitive conditioning

    OpenAIRE

    Woods, Amanda M.; Bouton, Mark E.

    2008-01-01

    Five experiments with rat subjects compared the effects of immediate and delayed extinction on the durability of extinction learning. Three experiments examined extinction of fear conditioning (using the conditioned emotional response method), and two experiments examined extinction of appetitive conditioning (using the food-cup entry method). In all experiments, conditioning and extinction were accomplished in single sessions, and retention testing took place 24 h after extinction. In both f...

  18. A rediscussion of the atmospheric extinction and the absolute spectral-energy distribution of Vega

    International Nuclear Information System (INIS)

    Hayes, D.S.; Latham, D.W.

    1975-01-01

    For both the Lick and the Palomar calibrations of the spectral-energy distribution of Vega, the atmospheric extinction was treated incorrectly. We present a model for extinction in the Earth's atmosphere and use this model to calculate corrections to the Lick and Palomar calibrations. We also describe a method that can be used to fabricate mean extinction coefficients for any mountain observatory. We combine selected portions of the corrected Lick and corrected Palomar calibrations with the new Mount Hopkins calibration to generate an absolute spectral-energy distibution of Vega over the wavelength range 3300--10,800 A. Until better measurements become available, we recommend the use of this calibration for all practical applications

  19. Extinction produces context inhibition and multiple-context extinction reduces response recovery in human predictive learning.

    Science.gov (United States)

    Glautier, Steven; Elgueta, Tito; Nelson, James Byron

    2013-12-01

    Two experiments with human participants were used to investigate recovery of an extinguished learned response after a context change using ABC designs. In an ABC design, the context changes over the three successive stages of acquisition (context A), extinction (context B), and test (context C). In both experiments, we found reduced recovery in groups that had extinction in multiple contexts, and that the extinction contexts acquired inhibitory strength. These results confirm those of previous investigations, that multiple-context extinction can produce less response recovery than single-context extinction, and they also provide new evidence for the involvement of contextual inhibitory processes in extinction in humans. The foregoing results are broadly in line with a protection-from-extinction account of response recovery. Yet, despite the fact that we detected contextual inhibition, predictions based on protection-from-extinction were not fully reliable for the single- and multiple-context group differences that we observed in (1) rates of extinction and (2) the strength of context inhibition. Thus, although evidence was obtained for a protection-from-extinction account of response recovery, this account can not explain all of the data.

  20. Estimating extinction using unsupervised machine learning

    Science.gov (United States)

    Meingast, Stefan; Lombardi, Marco; Alves, João

    2017-05-01

    Dust extinction is the most robust tracer of the gas distribution in the interstellar medium, but measuring extinction is limited by the systematic uncertainties involved in estimating the intrinsic colors to background stars. In this paper we present a new technique, Pnicer, that estimates intrinsic colors and extinction for individual stars using unsupervised machine learning algorithms. This new method aims to be free from any priors with respect to the column density and intrinsic color distribution. It is applicable to any combination of parameters and works in arbitrary numbers of dimensions. Furthermore, it is not restricted to color space. Extinction toward single sources is determined by fitting Gaussian mixture models along the extinction vector to (extinction-free) control field observations. In this way it becomes possible to describe the extinction for observed sources with probability densities, rather than a single value. Pnicer effectively eliminates known biases found in similar methods and outperforms them in cases of deep observational data where the number of background galaxies is significant, or when a large number of parameters is used to break degeneracies in the intrinsic color distributions. This new method remains computationally competitive, making it possible to correctly de-redden millions of sources within a matter of seconds. With the ever-increasing number of large-scale high-sensitivity imaging surveys, Pnicer offers a fast and reliable way to efficiently calculate extinction for arbitrary parameter combinations without prior information on source characteristics. The Pnicer software package also offers access to the well-established Nicer technique in a simple unified interface and is capable of building extinction maps including the Nicest correction for cloud substructure. Pnicer is offered to the community as an open-source software solution and is entirely written in Python.

  1. Amount of fear extinction changes its underlying mechanisms.

    Science.gov (United States)

    An, Bobae; Kim, Jihye; Park, Kyungjoon; Lee, Sukwon; Song, Sukwoon; Choi, Sukwoo

    2017-07-03

    There has been a longstanding debate on whether original fear memory is inhibited or erased after extinction. One possibility that reconciles this uncertainty is that the inhibition and erasure mechanisms are engaged in different phases (early or late) of extinction. In this study, using single-session extinction training and its repetition (multiple-session extinction training), we investigated the inhibition and erasure mechanisms in the prefrontal cortex and amygdala of rats, where neural circuits underlying extinction reside. The inhibition mechanism was prevalent with single-session extinction training but faded when single-session extinction training was repeated. In contrast, the erasure mechanism became prevalent when single-session extinction training was repeated. Moreover, ablating the intercalated neurons of amygdala, which are responsible for maintaining extinction-induced inhibition, was no longer effective in multiple-session extinction training. We propose that the inhibition mechanism operates primarily in the early phase of extinction training, and the erasure mechanism takes over after that.

  2. Vertical profiles of aerosol optical properties and the solar heating rate estimated by combining sky radiometer and lidar measurements

    Science.gov (United States)

    Kudo, Rei; Nishizawa, Tomoaki; Aoyagi, Toshinori

    2016-07-01

    The SKYLIDAR algorithm was developed to estimate vertical profiles of aerosol optical properties from sky radiometer (SKYNET) and lidar (AD-Net) measurements. The solar heating rate was also estimated from the SKYLIDAR retrievals. The algorithm consists of two retrieval steps: (1) columnar properties are retrieved from the sky radiometer measurements and the vertically mean depolarization ratio obtained from the lidar measurements and (2) vertical profiles are retrieved from the lidar measurements and the results of the first step. The derived parameters are the vertical profiles of the size distribution, refractive index (real and imaginary parts), extinction coefficient, single-scattering albedo, and asymmetry factor. Sensitivity tests were conducted by applying the SKYLIDAR algorithm to the simulated sky radiometer and lidar data for vertical profiles of three different aerosols, continental average, transported dust, and pollution aerosols. The vertical profiles of the size distribution, extinction coefficient, and asymmetry factor were well estimated in all cases. The vertical profiles of the refractive index and single-scattering albedo of transported dust, but not those of transported pollution aerosol, were well estimated. To demonstrate the performance and validity of the SKYLIDAR algorithm, we applied the SKYLIDAR algorithm to the actual measurements at Tsukuba, Japan. The detailed vertical structures of the aerosol optical properties and solar heating rate of transported dust and smoke were investigated. Examination of the relationship between the solar heating rate and the aerosol optical properties showed that the vertical profile of the asymmetry factor played an important role in creating vertical variation in the solar heating rate. We then compared the columnar optical properties retrieved with the SKYLIDAR algorithm to those produced with the more established scheme SKYRAD.PACK, and the surface solar irradiance calculated from the SKYLIDAR

  3. Attenuation coefficients of soils

    International Nuclear Information System (INIS)

    Martini, E.; Naziry, M.J.

    1989-01-01

    As a prerequisite to the interpretation of gamma-spectrometric in situ measurements of activity concentrations of soil radionuclides the attenuation of 60 to 1332 keV gamma radiation by soil samples varying in water content and density has been investigated. A useful empirical equation could be set up to describe the dependence of the mass attenuation coefficient upon photon energy for soil with a mean water content of 10%, with the results comparing well with data in the literature. The mean density of soil in the GDR was estimated at 1.6 g/cm 3 . This value was used to derive the linear attenuation coefficients, their range of variation being 10%. 7 figs., 5 tabs. (author)

  4. "Life history space": a multivariate analysis of life history variation in extant and extinct Malagasy lemurs.

    Science.gov (United States)

    Catlett, Kierstin K; Schwartz, Gary T; Godfrey, Laurie R; Jungers, William L

    2010-07-01

    Studies of primate life history variation are constrained by the fact that all large-bodied extant primates are haplorhines. However, large-bodied strepsirrhines recently existed. If we can extract life history information from their skeletons, these species can contribute to our understanding of primate life history variation. This is particularly important in light of new critiques of the classic "fast-slow continuum" as a descriptor of variation in life history profiles across mammals in general. We use established dental histological methods to estimate gestation length and age at weaning for five extinct lemur species. On the basis of these estimates, we reconstruct minimum interbirth intervals and maximum reproductive rates. We utilize principal components analysis to create a multivariate "life history space" that captures the relationships among reproductive parameters and brain and body size in extinct and extant lemurs. Our data show that, whereas large-bodied extinct lemurs can be described as "slow" in some fashion, they also varied greatly in their life history profiles. Those with relatively large brains also weaned their offspring late and had long interbirth intervals. These were not the largest of extinct lemurs. Thus, we distinguish size-related life history variation from variation that linked more strongly to ecological factors. Because all lemur species larger than 10 kg, regardless of life history profile, succumbed to extinction after humans arrived in Madagascar, we argue that large body size increased the probability of extinction independently of reproductive rate. We also provide some evidence that, among lemurs, brain size predicts reproductive rate better than body size. (c) 2010 Wiley-Liss, Inc.

  5. Temporal factors in the extinction of fear in inbred mouse strains differing in extinction efficacy.

    Science.gov (United States)

    MacPherson, Kathryn; Whittle, Nigel; Camp, Marguerite; Gunduz-Cinar, Ozge; Singewald, Nicolas; Holmes, Andrew

    2013-07-05

    Various neuropsychiatric conditions, including posttraumatic stress disorder (PTSD), are characterized by deficient fear extinction, but individuals differ greatly in risk for these. While there is growing evidence that fear extinction is influenced by certain procedural variables, it is unclear how these influences might vary across individuals and subpopulations. To model individual differences in fear extinction, prior studies identified a strain of inbred mouse, 129S1/SvImJ (S1), which exhibits a profound deficit in fear extinction, as compared to other inbred strains, such as C57BL/6J (B6). Here, we assessed the effects of procedural variables on the impaired extinction phenotype of the S1 strain and, by comparison, the extinction-intact B6 strain. The variables studied were 1) the interval between conditioning and extinction, 2) the interval between cues during extinction training, 3) single-cue exposure before extinction training, and 4) extinction of a second-order conditioned cue. Conducting extinction training soon after ('immediately') conditioning attenuated fear retrieval in S1 mice and impaired extinction in B6 mice. Spacing cue presentations with long inter-trial intervals during extinction training augmented fear in S1 and B6 mice. The effect of spacing was lost with one-trial fear conditioning in B6, but not S1 mice. A single exposure to a conditioned cue before extinction training did not alter extinction retrieval, either in B6 or S1 mice. Both the S1 and B6 strains exhibited robust second-order fear conditioning, in which a cue associated with footshock was sufficient to serve as a conditioned exciter to condition a fear association to a second cue. B6 mice extinguished the fear response to the second-order conditioned cue, but S1 mice failed to do so. These data provide further evidence that fear extinction is strongly influenced by multiple procedural variables and is so in a highly strain-dependent manner. This suggests that the efficacy of

  6. Hospital autopsy: Endangered or extinct?

    Science.gov (United States)

    Turnbull, Angus; Osborn, Michael; Nicholas, Nick

    2015-08-01

    To determine the hospital autopsy rate for the UK in 2013. A study of data from a 'Freedom of Information' request to all (n=186) acute NHS Trusts within England (n=160), NHS Boards in Scotland (n=14) and Wales (n=7) and Social Care Trusts in Northern Ireland (n=5). Hospital autopsy rates were calculated from the number of hospital autopsies performed in 2013 as a percentage of total inpatient deaths in the Trust that year. The UK response rate was 99% (n=184), yielding a mean autopsy rate of 0.69%. The mean rates were 0.51% (England), 2.13% (Scotland), 0.65% (Wales) and 0.46% (Northern Ireland). 23% (n=38) of all included respondents had a rate of 0% and 86% (n=143) a rate less than 1%. The decline in hospital autopsy has continued relentlessly and, for better or for worse, the practice is on the verge of extinction in the UK. The study highlights to health professionals and policy makers the magnitude of this decline. Further research should investigate the impact of this on patient safety, clinical audit, public health and medical education. Published by the BMJ Publishing Group Limited. For permission to use (where not already granted under a licence) please go to http://group.bmj.com/group/rights-licensing/permissions.

  7. Extinction from a rationalist perspective.

    Science.gov (United States)

    Gallistel, C R

    2012-05-01

    The merging of the computational theory of mind and evolutionary thinking leads to a kind of rationalism, in which enduring truths about the world have become implicit in the computations that enable the brain to cope with the experienced world. The dead reckoning computation, for example, is implemented within the brains of animals as one of the mechanisms that enables them to learn where they are (Gallistel, 1990, 1995). It integrates a velocity signal with respect to a time signal. Thus, the manner in which position and velocity relate to one another in the world is reflected in the manner in which signals representing those variables are processed in the brain. I use principles of information theory and Bayesian inference to derive from other simple principles explanations for: (1) the failure of partial reinforcement to increase reinforcements to acquisition; (2) the partial reinforcement extinction effect; (3) spontaneous recovery; (4) renewal; (5) reinstatement; (6) resurgence (aka facilitated reacquisition). Like the principle underlying dead-reckoning, these principles are grounded in analytic considerations. They are the kind of enduring truths about the world that are likely to have shaped the brain's computations. Copyright © 2012 Elsevier B.V. All rights reserved.

  8. Stress before extinction learning enhances and generalizes extinction memory in a predictive learning task.

    Science.gov (United States)

    Meir Drexler, Shira; Hamacher-Dang, Tanja C; Wolf, Oliver T

    2017-05-01

    In extinction learning, the individual learns that a previously acquired association (e.g. between a threat and its predictor) is no longer valid. This learning is the principle underlying many cognitive-behavioral psychotherapeutic treatments, e.g. 'exposure therapy'. However, extinction is often highly-context dependent, leading to renewal (relapse of extinguished conditioned response following context change). We have previously shown that post-extinction stress leads to a more context-dependent extinction memory in a predictive learning task. Yet as stress prior to learning can impair the integration of contextual cues, here we aim to create a more generalized extinction memory by inducing stress prior to extinction. Forty-nine men and women learned the associations between stimuli and outcomes in a predictive learning task (day 1), extinguished them shortly after an exposure to a stress/control condition (day 2), and were tested for renewal (day 3). No group differences were seen in acquisition and extinction learning, and a renewal effect was present in both groups. However, the groups differed in the strength and context-dependency of the extinction memory. Compared to the control group, the stress group showed an overall reduced recovery of responding to the extinguished stimuli, in particular in the acquisition context. These results, together with our previous findings, demonstrate that the effects of stress exposure on extinction memory depend on its timing. While post-extinction stress makes the memory more context-bound, pre-extinction stress strengthens its consolidation for the acquisition context as well, making it potentially more resistant to relapse. These results have implications for the use of glucocorticoids as extinction-enhancers in exposure therapy. Copyright © 2017 Elsevier Inc. All rights reserved.

  9. Interstellar extinction in the Small Magellanic Cloud

    International Nuclear Information System (INIS)

    Nandy, K.; McLachlan, A.; Thompson, G.I.; Morgan, D.H.; Willis, A.J.; Wilson, R.; Gondhalekar, P.M.; Houziaux, L.

    1982-01-01

    IUE observations of three considerably reddened stars located near the core of the Small Magellanic Cloud and of two comparison stars which are also SMC members are presented. This region contains a considerable amount of dust. The UV spectrum of one of the reddened stars (BBB 338) shows the lambda 2200 feature characteristic of the Galactic extinction curve. This absorption feature is not obvious in the UV spectra of the other two reddened stars. Due to lack of a suitable comparison star it has not been possible to measure the UV extinction of BBB 338. The extinction curves derived for the other two reddened SMC members differ from the mean Galactic law in that they exhibit very weak or absent lambda 2200 and much higher values of far-UV extinction. These differences are greater than have been found for stars in the Large Magellanic Cloud, confirming earlier observations by others. (author)

  10. Anthropogenic stressors and riverine fish extinctions

    NARCIS (Netherlands)

    Dias, M.S.; Tedesco, P.A.; Hugueny, B.; Jézéquel, C.; Beauchard, O.; Brosse, S.; Oberdorff, T.

    2017-01-01

    Human activities are often implicated in the contemporary extinction of contemporary species. Concerningriverine fishes, the major biotic and abiotic threats widely cited include introduction of non-nativespecies, habitat fragmentation and homogenization in stream flow dynamics due to the damming

  11. Are marine and nonmarine extinctions correlated?

    Science.gov (United States)

    Rampino, Michael R.

    Recent papers in Eos have debated the possible relationships between marine mass extinctions, comet showers, and volcanism [Alvarez, 1986; Officer and Grieve, 1986], and ail three might be linked [Rampino, 1987]. Moreover, as Officer and Grieve [ 1986] point out, various other causes have been suggested for given extinction events, including changes in climate, ocean circulation, and sea level fluctuations, possibly related to plate tectonics and continental positions. Also under debate is the issue of whether mass extinctions were gradual, stepped, or geologically sudden events (see, for example, Hut et al. [1987]). A missing ingredient thus far in these debates has been the record of faunal diversity of nonmarine animals. Does this show any agreement with the marine extinction record?

  12. Extinction vulnerability of coral reef fishes.

    Science.gov (United States)

    Graham, Nicholas A J; Chabanet, Pascale; Evans, Richard D; Jennings, Simon; Letourneur, Yves; Aaron Macneil, M; McClanahan, Tim R; Ohman, Marcus C; Polunin, Nicholas V C; Wilson, Shaun K

    2011-04-01

    With rapidly increasing rates of contemporary extinction, predicting extinction vulnerability and identifying how multiple stressors drive non-random species loss have become key challenges in ecology. These assessments are crucial for avoiding the loss of key functional groups that sustain ecosystem processes and services. We developed a novel predictive framework of species extinction vulnerability and applied it to coral reef fishes. Although relatively few coral reef fishes are at risk of global extinction from climate disturbances, a negative convex relationship between fish species locally vulnerable to climate change vs. fisheries exploitation indicates that the entire community is vulnerable on the many reefs where both stressors co-occur. Fishes involved in maintaining key ecosystem functions are more at risk from fishing than climate disturbances. This finding is encouraging as local and regional commitment to fisheries management action can maintain reef ecosystem functions pending progress towards the more complex global problem of stabilizing the climate. © 2011 Blackwell Publishing Ltd/CNRS.

  13. Instrument for long-path spectral extinction measurements in air: application to sizing of airborne particles

    International Nuclear Information System (INIS)

    Paganini, Enrico; Trespidi, Franco; Ferri, Fabio

    2001-01-01

    A novel instrument that is capable of taking spectral extinction measurements over long optical paths (approximately 1-100 m) in the UV, visible, and IR ranges is described. The instrument is fully automated, and the extinction spectrum is acquired in almost real time (approximately 5-10 s) with a resolution of ∼3 nm. Its sensitivity and accuracy were estimated by tests carried out in a clean room that showed that, for optical paths between 50 and 100 m, the extinction coefficient can be detected at levels of ∼10 -5 m -1 . Tests carried out on calibrated latex particles showed that, when it was combined with an appropriate inversion method, the technique could be profitably applied to characterize airborne particulate distributions. By carrying out measurements over optical paths of ∼100 m, the instrument is also capable of detecting extinction coefficients that are due to aerosol concentrations well below the limits imposed by the European Economic Community for atmospheric pollution (150 μg/m3). Scaled over optical paths of ∼10 m, the limit imposed for particle emissions from industrial plants (10 mg/m3) can also be detected sensitively

  14. Interstellar Silicon Depletion and the Ultraviolet Extinction

    Science.gov (United States)

    Mishra, Ajay; Li, Aigen

    2018-01-01

    Spinning small silicate grains were recently invoked to account for the Galactic foreground anomalous microwave emission. These grains, if present, will absorb starlight in the far ultraviolet (UV). There is also renewed interest in attributing the enigmatic 2175 Å interstellar extinction bump to small silicates. To probe the role of silicon in the UV extinction, we explore the relations between the amount of silicon required to be locked up in silicates [Si/H]dust and the 2175 Å bump or the far-UV extinction rise, based on an analysis of the extinction curves along 46 Galactic sightlines for which the gas-phase silicon abundance [Si/H]gas is known. We derive [Si/H]dust either from [Si/H]ISM - [Si/H]gas or from the Kramers- Kronig relation which relates the wavelength-integrated extinction to the total dust volume, where [Si/H]ISM is the interstellar silicon reference abundance and taken to be that of proto-Sun or B stars. We also derive [Si/H]dust from fi�tting the observed extinction curves with a mixture of amorphous silicates and graphitic grains. We fi�nd that in all three cases [Si/H]dust shows no correlation with the 2175 Å bump, while the carbon depletion [C/H]dust tends to correlate with the 2175 Å bump. This supports carbon grains instead of silicates as the possible carrier of the 2175 Å bump. We also �find that neither [Si/H]dust nor [C/H]dust alone correlates with the far-UV extinction, suggesting that the far-UV extinction is a combined effect of small carbon grains and silicates.

  15. Post-Retrieval Extinction Attenuates Cocaine Memories

    OpenAIRE

    Sartor, Gregory C; Aston-Jones, Gary

    2013-01-01

    Recent studies have shown that post-retrieval extinction training attenuates fear and reward-related memories in both humans and rodents. This noninvasive, behavioral approach has the potential to be used in clinical settings to treat maladaptive memories that underlie several psychiatric disorders, including drug addiction. However, few studies to date have used a post-retrieval extinction approach to attenuate addiction-related memories. In the current study, we attempted to disrupt cocaine...

  16. Modelling the extinction of Steller's sea cow

    OpenAIRE

    Turvey, S.T; Risley, C.L

    2005-01-01

    Steller's sea cow, a giant sirenian discovered in 1741 and extinct by 1768, is one of the few megafaunal mammal species to have died out during the historical period. The species is traditionally considered to have been exterminated by ‘blitzkrieg’-style direct overharvesting for food, but it has also been proposed that its extinction resulted from a sea urchin population explosion triggered by extirpation of local sea otter populations that eliminated the shallow-water kelps on which sea cow...

  17. A model for evolution and extinction

    OpenAIRE

    Roberts, Bruce W.; Newman, M. E. J.

    1995-01-01

    We present a model for evolution and extinction in large ecosystems. The model incorporates the effects of interactions between species and the influences of abiotic environmental factors. We study the properties of the model by approximate analytic solution and also by numerical simulation, and use it to make predictions about the distribution of extinctions and species lifetimes that we would expect to see in real ecosystems. It should be possible to test these predictions against the fossi...

  18. Extinction of laminar partially premixed flames

    Energy Technology Data Exchange (ETDEWEB)

    Aggarwal, Suresh K. [Department of Mechanical and Industrial Engineering, University of Illinois at Chicago, 842 W. Taylor Street, Room 2039, MC-251, Chicago, IL 60607-7022 (United States)

    2009-12-15

    Flame extinction represents one of the classical phenomena in combustion science. It is important to a variety of combustion systems in transportation and power generation applications. Flame extinguishment studies are also motivated from the consideration of fire safety and suppression. Such studies have generally considered non-premixed and premixed flames, although fires can often originate in a partially premixed mode, i.e., fuel and oxidizer are partially premixed as they are transported to the reaction zone. Several recent investigations have considered this scenario and focused on the extinction of partially premixed flames (PPFs). Such flames have been described as hybrid flames possessing characteristics of both premixed and non-premixed flames. This paper provides a review of studies dealing with the extinction of PPFs, which represent a broad family of flames, including double, triple (tribrachial), and edge flames. Theoretical, numerical and experimental studies dealing with the extinction of such flames in coflow and counterflow configurations are discussed. Since these flames contain both premixed and non-premixed burning zones, a brief review of the dilution-induced extinction of premixed and non-premixed flames is also provided. For the coflow configuration, processes associated with flame liftoff and blowout are described. Since lifted non-premixed jet flames often contain a partially premixed or an edge-flame structure prior to blowout, the review also considers such flames. While the perspective of this review is broad focusing on the fundamental aspects of flame extinction and blowout, results mostly consider flame extinction caused by the addition of a flame suppressant, with relevance to fire suppression on earth and in space environment. With respect to the latter, the effect of gravity on the extinction of PPFs is discussed. Future research needs are identified. (author)

  19. The Truth About Ballistic Coefficients

    OpenAIRE

    Courtney, Michael; Courtney, Amy

    2007-01-01

    The ballistic coefficient of a bullet describes how it slows in flight due to air resistance. This article presents experimental determinations of ballistic coefficients showing that the majority of bullets tested have their previously published ballistic coefficients exaggerated from 5-25% by the bullet manufacturers. These exaggerated ballistic coefficients lead to inaccurate predictions of long range bullet drop, retained energy and wind drift.

  20. The extinction of the West African lion: whose responsibility?

    NARCIS (Netherlands)

    Nollkaemper, A.

    2014-01-01

    A recently published study showed that the lion in West Africa is now critically endangered and faces extinction. From one angle, this would be just one of the large (though unknown) number of species that has previously faced extinction or has even become extinct. But the risk of extinction of some

  1. Compound Stimulus Extinction Reduces Spontaneous Recovery in Humans

    Science.gov (United States)

    Coelho, Cesar A. O.; Dunsmoor, Joseph E.; Phelps, Elizabeth A.

    2015-01-01

    Fear-related behaviors are prone to relapse following extinction. We tested in humans a compound extinction design ("deepened extinction") shown in animal studies to reduce post-extinction fear recovery. Adult subjects underwent fear conditioning to a visual and an auditory conditioned stimulus (CSA and CSB, respectively) separately…

  2. Caracterizacion de nueve genotipos de maiz (Zea mays L. en relacion a area foliar y coeficiente de extincion de luz Caracterização de nove genótipos de milho (Zea mays L. en relação à área foliar e coeficiente de extinção de luz Evaluation of nine corn (Zea mays L. genotypes in relation to leaf area and light extinction coefficient

    Directory of Open Access Journals (Sweden)

    R.G. Camacho

    1995-08-01

    .A field experiment was carried out to evaluate nine corn genotypes (Arichuna, Baraure, B raquitico, Expe-rimental-2, Foremaiz PB, FM-6, Obregón, Proseca-71 and Tocorón in relation to: mean leaf area per plant, total leaf area per plant (TLA, leaf area index (LAI, grain yield (Y and light extinction coefficient (K at 0.50m, 1.00m, 1.50m, 2.00m and 2.50m of plant height (from soil to flag leaf. Also, correlation and single regression between LAI and yield was performed. Significant genotypical differences for all variables were found, except for mean leaf area per plant Ranging was: mean leaf area per plant (471 cm² for Foremaiz PB and 606 cm² for Baraure; TLA (5,327 cm² for Foremaiz PB and 8,411 for Braquítico; LAI (4.26, Foremaiz PB and 6.67, Braquítico; K (0.23 for Braquítico and 0.42, Arichuna; Y (2, 877, Braquítico and 4,784 kg.ha-1 for Tocoron.The relationship between Y and LAI was not significant (r = 0.07. The relationship of LAI and K was described very well by Beer's law.

  3. AESoP: Astronomical Extinction Spectrophotometer

    Science.gov (United States)

    Linford, Justin; McGraw, J.; Zimmer, P.; Ackermann, M.; Fitch, J.

    2009-01-01

    The Earth's atmosphere is a major obstruction to the precision and accuracy of ground-based photometry. The atmosphere removes light from astronomical objects both by absorption and scattering by constituent molecules, aerosols and clouds. These effects can change significantly over short time periods and over modest angles on the sky. To further understand these effects, the UNM Measurement Astrophysics Group has designed, built and recently deployed the Astronomical Extinction Spectrophotometer (AESoP), a 100mm objective grating spectrometer. By monitoring bright stars in sensibly the same direction as a larger photometric telescope is observing, AESoP will measure the wavelength-dependent extinction due to the Earth's atmosphere from 450nm to 900nm on time scales of approximately one minute. The collocated Astronomical LIDAR for Extinction (ALE) provides a high-precision monochromatic extinction measurement at 527nm. Knowing the extinction at a single wavelength allows us to pin the relative spectra generated by AESoP. These extinction spectra can then be integrated over the bandpass of the photometric telescope system to create real time corrections of observations. We present the design and construction of AESoP along with the preliminary results of our first combined observing campaign. This effort is our first step toward breaking the 1% photometry barrier. This project is funded by AFRL Grant FA9451-04-2-0355

  4. How does climate change cause extinction?

    Science.gov (United States)

    Cahill, Abigail E; Aiello-Lammens, Matthew E; Fisher-Reid, M Caitlin; Hua, Xia; Karanewsky, Caitlin J; Ryu, Hae Yeong; Sbeglia, Gena C; Spagnolo, Fabrizio; Waldron, John B; Warsi, Omar; Wiens, John J

    2013-01-07

    Anthropogenic climate change is predicted to be a major cause of species extinctions in the next 100 years. But what will actually cause these extinctions? For example, will it be limited physiological tolerance to high temperatures, changing biotic interactions or other factors? Here, we systematically review the proximate causes of climate-change related extinctions and their empirical support. We find 136 case studies of climatic impacts that are potentially relevant to this topic. However, only seven identified proximate causes of demonstrated local extinctions due to anthropogenic climate change. Among these seven studies, the proximate causes vary widely. Surprisingly, none show a straightforward relationship between local extinction and limited tolerances to high temperature. Instead, many studies implicate species interactions as an important proximate cause, especially decreases in food availability. We find very similar patterns in studies showing decreases in abundance associated with climate change, and in those studies showing impacts of climatic oscillations. Collectively, these results highlight our disturbingly limited knowledge of this crucial issue but also support the idea that changing species interactions are an important cause of documented population declines and extinctions related to climate change. Finally, we briefly outline general research strategies for identifying these proximate causes in future studies.

  5. Extinction rates in North American freshwater fishes, 1900-2010

    Science.gov (United States)

    Burkhead, Noel M.

    2012-01-01

    Widespread evidence shows that the modern rates of extinction in many plants and animals exceed background rates in the fossil record. In the present article, I investigate this issue with regard to North American freshwater fishes. From 1898 to 2006, 57 taxa became extinct, and three distinct populations were extirpated from the continent. Since 1989, the numbers of extinct North American fishes have increased by 25%. From the end of the nineteenth century to the present, modern extinctions varied by decade but significantly increased after 1950 (post-1950s mean = 7.5 extinct taxa per decade). In the twentieth century, freshwater fishes had the highest extinction rate worldwide among vertebrates. The modern extinction rate for North American freshwater fishes is conservatively estimated to be 877 times greater than the background extinction rate for freshwater fishes (one extinction every 3 million years). Reasonable estimates project that future increases in extinctions will range from 53 to 86 species by 2050.

  6. An Investigation into the Effect of Hydrodynamic Cavitation on Diesel using Optical Extinction

    Science.gov (United States)

    Lockett, R. D.; Fatmi, Z.; Kuti, O.; Price, R.

    2015-12-01

    A conventional diesel and paraffinic-rich model diesel fuel were subjected to sustained cavitation in a custom-built high-pressure recirculation flow rig. Changes to the spectral extinction coefficient at 405 nm were measured using a simple optical arrangement. The spectral extinction coefficient at 405 nm for the conventional diesel sample was observed to increase to a maximum value and then asymptotically decrease to a steady-state value, while that for the paraffinic-rich model diesel was observed to progressively decrease. It is suggested that this is caused by the sonochemical pyrolysis of mono-aromatics to form primary soot-like carbonaceous particles, which then coagulate to form larger particles, which are then trapped by the filter, leading to a steady-state spectral absorbance.

  7. The Late Ordovician Extinction: How it became the best understood of the five major extinctions.

    Science.gov (United States)

    Sheehan, P.

    2003-04-01

    The end Ordovician extinction has become arguably the best-understood major extinction event in Earth History. A plethora of workers have established the pattern of faunal change and causes of the extinction with remarkably little disagreement. The first indication of increased extinction at the end of the Ordovician was a graph of global diversity patterns by Norman Newell in 1967, although he did not recognize it as a major event. The presence of a major extinction event became clear as William Berry and Art Boucot assembled data for Silurian correlation charts in the late 1960s. The first reports of North African glaciation in the late 1960s provided a cause for the extinction and study of the event snowballed. It was no accident that recognition of the extinction began in North America, because it was there that the extinction completely overturned faunas in the epicontinental seas. Glacio-eustatic regression of shallow seaway coincided with the disappearance of endemic Laurentian faunas and replacement by a highly cosmopolitan fauna in the Silurian. Once the event was established in North America, paleontologists soon found evidence of the event around the globe. The well-documented Hirnantia Fauna was found to correspond to the glacial interval, and Pat Brenchley soon recognized that there were two pulses of extinction, at the beginning and end of the glaciation. At the same time that the faunal changes were being documented geologic studies of the glaciation provided information on the environmental changes associated with the extinction. The timing of the glacial maximum was established in Africa and by the presence of dropstones in high latitude marine rocks. The 1990s saw geochemical techniques employed that allowed examination of atmospheric CO2 and temperature changes. In many places carbonate deposition declined. Glacio-eustatic regression was obvious in many areas, and a sea-level decline in the range of 50-100 m was established. Shallow

  8. Immediate Extinction Causes a Less Durable Loss of Performance than Delayed Extinction following Either Fear or Appetitive Conditioning

    Science.gov (United States)

    Woods, Amanda M.; Bouton, Mark E.

    2008-01-01

    Five experiments with rat subjects compared the effects of immediate and delayed extinction on the durability of extinction learning. Three experiments examined extinction of fear conditioning (using the conditioned emotional response method), and two experiments examined extinction of appetitive conditioning (using the food-cup entry method). In…

  9. Organic-Chemical Clues to the Theory of Impacts as a Cause of Mass Extinctions

    Science.gov (United States)

    Sack, N. J.

    1988-11-01

    The reasons for the mass extinctions, which occur from time to time in Earth's history-as, e.g., the dinosaur extinction at the Cretaceous/Tertiary boundary 65 myr ago - are still not satisfactorily cleared up. A possible reason might be the impact of one or several comets of several kilometers in diameter. In this paper the astrophysical background of this hypothesis and organic-chemical processes during an impact will be discussed. Quantitative estimations are given, which show that the amount of organic substances brought to the Earth may be of the same order of magnitude as the normal biological production of organic material. Investigations are proposed to examine the organic-chemical composition of profiles of the Cretaceous/Tertiary boundary and other boundaries, at which mass extinction had occurred, in order to find anomalies as consequences of impacts.

  10. Bilateral Alternating Auditory Stimulations Facilitate Fear Extinction and Retrieval

    OpenAIRE

    Boukezzi, Sarah; Silva, Catarina; Nazarian, Bruno; Rousseau, Pierre-François; Guedj, Eric; Valenzuela-Moguillansky, Camila; Khalfa, Stéphanie

    2017-01-01

    Disruption of fear conditioning, its extinction and its retrieval are at the core of posttraumatic stress disorder (PTSD). Such deficits, especially fear extinction delay, disappear after alternating bilateral stimulations (BLS) during eye movement desensitization and reprocessing (EMDR) therapy. An animal model of fear recovery, based on auditory cued fear conditioning and extinction learning, recently showed that BLS facilitate fear extinction and fear extinction retrieval. Our goal was to ...

  11. Unsaturated soil moisture drying and wetting diffusion coefficient measurements in the laboratory.

    Science.gov (United States)

    2009-09-01

    ABSTRACTTransient moisture flow in an unsaturated soil in response to suction changes is controlled by the unsaturated moisture diffusion coefficient. The moisture diffusion coefficient can be determined by measuring suction profiles over time. The l...

  12. Ultraviolet photometry from the orbiting astronomical observatory. XX. The ultraviolet extinction bump

    International Nuclear Information System (INIS)

    Savage, B.D.

    1975-01-01

    Interstellar extinction curves over the wavelength region 1800--3600 A are presented for 36 stars. The stars have E (B-V) in the range 0.03 to 0.55, and are mostly confined to the brighter OB associations distributed along the plane of the Galaxy. Every extinction curve exhibits a broad extinction bump peaking near 2175 A (4.6 μ -1 ). The position of the peak and the profile of the feature appear remarkably constant among the sample of stars. With only a few exceptions, E (lambda)-3320, a measure of the strength of the feature, correlates very well with E (B-V), implying that the bump has an interstellar rather than a circumstellar origin. The observation that the bump position and shape are constant, or very nearly constant, places severe restrictions on the grain geometrical parameters if the feature is to be explained by classical scattering theory employing bulk optical constants. In fact, the restrictions are so severe that an alternate explanation seems to be required unless the dust grains that exist in widely separated regions of space and under very different physical conditions have nearly identical size and shape distributions. Three extinction curves that extend to 1100 A are also presented. These curves show the same general extinction characteristics reported earlier. The curve for 22 Sco provides another example of a star that is []physically associated with nebulosity and that also has abnormally low far-ultraviolet extinction. We have searched the extinction curves for fine structure such as abrupt slope changes or new diffuse interstellar features. Unfortunately, there is no convincing evidence for such structure over the interval 1800--3600 A. (auth)

  13. Extinction Generates Outcome-Specific Conditioned Inhibition.

    Science.gov (United States)

    Laurent, Vincent; Chieng, Billy; Balleine, Bernard W

    2016-12-05

    Extinction involves altering a previously established predictive relationship between a cue and its outcome by repeatedly presenting that cue alone. Although it is widely accepted that extinction generates some form of inhibitory learning [1-4], direct evidence for this claim has been lacking, and the nature of the associative changes induced by extinction have, therefore, remained a matter of debate [5-8]. In the current experiments, we used a novel behavioral approach that we recently developed and that provides a direct measure of conditioned inhibition [9] to compare the influence of extinguished and non-extinguished cues on choice between goal-directed actions. Using this approach, we provide direct evidence that extinction generates outcome-specific conditioned inhibition. Furthermore, we demonstrate that this inhibitory learning is controlled by the infralimbic cortex (IL); inactivation of the IL using M4 DREADDs abolished outcome-specific inhibition and rendered the cue excitatory. Importantly, we found that context modulated this inhibition. Outside its extinction context, the cue was excitatory and functioned as a specific predictor of its previously associated outcome, biasing choice toward actions earning the same outcome. In its extinction context, however, the cue acted as a specific inhibitor and biased choice toward actions earning different outcomes. Context modulation of these excitatory and inhibitory memories was mediated by the dorsal hippocampus (HPC), suggesting that the HPC and IL act in concert to control the influence of conditioned inhibitors on choice. These findings demonstrate for the first time that extinction turns a cue into a net inhibitor that can influence choice via counterfactual action-outcome associations. Copyright © 2016 Elsevier Ltd. All rights reserved.

  14. Elevational distribution and extinction risk in birds.

    Directory of Open Access Journals (Sweden)

    Rachel L White

    Full Text Available Mountainous regions are hotspots of terrestrial biodiversity. Unlike islands, which have been the focus of extensive research on extinction dynamics, fewer studies have examined mountain ranges even though they face increasing threats from human pressures - notably habitat conversion and climate change. Limits to the taxonomic and geographical extent and resolution of previously available information have precluded an explicit assessment of the relative role of elevational distribution in determining extinction risk. We use a new global species-level avian database to quantify the influence of elevational distribution (range, maximum and midpoint on extinction risk in birds at the global scale. We also tested this relationship within biogeographic realms, higher taxonomic levels, and across phylogenetic contrasts. Potential confounding variables (i.e. phylogenetic, distributional, morphological, life history and niche breadth were also tested and controlled for. We show that the three measures of elevational distribution are strong negative predictors of avian extinction risk, with elevational range comparable and complementary to that of geographical range size. Extinction risk was also found to be positively associated with body weight, development and adult survival, but negatively associated with reproduction and niche breadth. The robust and consistent findings from this study demonstrate the importance of elevational distribution as a key driver of variation in extinction dynamics in birds. Our results also highlight elevational distribution as a missing criterion in current schemes for quantifying extinction risk and setting species conservation priorities in birds. Further research is recommended to test for generality across non-avian taxa, which will require an advance in our knowledge of species' current elevational ranges and increased efforts to digitise and centralise such data.

  15. Measurements of DSD Second Moment Based on Laser Extinction

    Science.gov (United States)

    Lane, John E.; Jones, Linwood; Kasparis, Takis C.; Metzger, Philip

    2013-01-01

    Using a technique recently developed for estimating the density of surface dust dispersed during a rocket landing, measuring the extinction of a laser passing through rain (or dust in the rocket case) yields an estimate of the 2nd moment of the particle cloud, and rainfall drop size distribution (DSD) in the terrestrial meteorological case. With the exception of disdrometers, instruments that measure rainfall make in direct measurements of the DSD. Most common of these instruments are the rainfall rate gauge measuring the 1 1/3 th moment, (when using a D(exp 2/3) dependency on terminal velocity). Instruments that scatter microwaves off of hydrometeors, such as the WSR-880, vertical wind profilers, and microwave disdrometers, measure the 6th moment of the DSD. By projecting a laser onto a target, changes in brightness of the laser spot against the target background during rain, yield a measurement of the DSD 2nd moment, using the Beer-Lambert law. In order to detect the laser attenuation within the 8-bit resolution of most camera image arrays, a minimum path length is required, depending on the intensity of the rainfall rate. For moderate to heavy rainfall, a laser path length of 100 m is sufficient to measure variations in optical extinction using a digital camera. A photo-detector could replace the camera, for automated installations. In order to spatially correlate the 2nd moment measurements to a collocated disdrometer or tipping bucket, the laser's beam path can be reflected multiple times using mirrors to restrict the spatial extent of the measurement. In cases where a disdrometer is not available, complete DSD estimates can be produced by parametric fitting of DSD model to the 2nd moment data in conjunction with tipping bucket data. In cases where a disdrometer is collocated, the laser extinction technique may yield a significant improvement to insitu disdrometer validation and calibration strategies

  16. Measuring Extinction in Local Group Galaxies Using Background Galaxies

    Science.gov (United States)

    Wyder, T. K.; Hodge, P. W.

    1999-05-01

    Knowledge of the distribution and quantity of dust in galaxies is important for understanding their structure and evolution. The goal of our research is to measure the total extinction through Local Group galaxies using measured properties of background galaxies. Our method relies on the SExtractor software as an objective and automated method of detecting background galaxies. In an initial test, we have explored two WFPC2 fields in the SMC and two in M31 obtained from the HST archives. The two pointings in the SMC are fields around the open clusters L31 and B83 while the two M31 fields target the globular clusters G1 and G170. Except for the G1 observations of M31, the fields chosen are very crowded (even when observed with HST) and we chose them as a particularly stringent test of the method. We performed several experiments using a series of completeness tests that involved superimposing comparison fields, adjusted to the equivalent exposure time, from the HST Medium-Deep and Groth-Westphal surveys. These tests showed that for crowded fields, such as the two in the core of the SMC and the one in the bulge of M31, this automated method of detecting galaxies can be completely dominated by the effects of crowding. For these fields, only a small fraction of the added galaxies was recovered. However, in the outlying G1 field in M31, almost all of the added galaxies were recovered. The numbers of actual background galaxies in this field are consistent with zero extinction. As a follow-up experiment, we used image processing techniques to suppress stellar objects while enhancing objects with non-stellar, more gradual luminosity profiles. This method yielded significant numbers of background galaxies in even the most crowded fields, which we are now analyzing to determine the total extinction and reddening caused by the foreground galaxy.

  17. Extinctions. Paleontological baselines for evaluating extinction risk in the modern oceans.

    Science.gov (United States)

    Finnegan, Seth; Anderson, Sean C; Harnik, Paul G; Simpson, Carl; Tittensor, Derek P; Byrnes, Jarrett E; Finkel, Zoe V; Lindberg, David R; Liow, Lee Hsiang; Lockwood, Rowan; Lotze, Heike K; McClain, Craig R; McGuire, Jenny L; O'Dea, Aaron; Pandolfi, John M

    2015-05-01

    Marine taxa are threatened by anthropogenic impacts, but knowledge of their extinction vulnerabilities is limited. The fossil record provides rich information on past extinctions that can help predict biotic responses. We show that over 23 million years, taxonomic membership and geographic range size consistently explain a large proportion of extinction risk variation in six major taxonomic groups. We assess intrinsic risk-extinction risk predicted by paleontologically calibrated models-for modern genera in these groups. Mapping the geographic distribution of these genera identifies coastal biogeographic provinces where fauna with high intrinsic risk are strongly affected by human activity or climate change. Such regions are disproportionately in the tropics, raising the possibility that these ecosystems may be particularly vulnerable to future extinctions. Intrinsic risk provides a prehuman baseline for considering current threats to marine biodiversity. Copyright © 2015, American Association for the Advancement of Science.

  18. Facilitation of extinction and re-extinction of operant behavior in mice by chlordiazepoxide and D-cycloserine.

    Science.gov (United States)

    Leslie, Julian C; Norwood, Kelly

    2013-05-01

    The aim was to compare operant extinction with re-extinction following re-acquisition and to investigate neuropharmacological mechanisms through administration of drugs potentiating GABAergic or glutamatergic systems. Groups of C57Bl/6 mice were trained to lever press for food on a fixed ratio schedule, then extinguished with or without pre-session chlordiazepoxide or post-session d-cycloserine administration (15mg/kg in each case), then retrained to lever press for food, then re-extinguished with or without pre-session chlordiazepoxide or post-session d-cycloserine. Under vehicle injections, extinction and re-extinction curves were indistinguishable, but drug treatments showed that there was less resistance to extinction in the re-extinction phase. Chlordiazepoxide facilitated extinction and re-extinction, with an earlier effect during re-extinction. d-Cycloserine also facilitated extinction and re-extinction, with some evidence of an earlier effect during re-extinction. These results replicate and extend earlier findings with operant extinction, but differ from some previous reports of d-cycloserine on re-extinction of Pavlovian conditioned fear. Implications for accounts of the similarities and differences between neural mechanisms of extinction following either Pavlovian or operant conditioning, and applications of these findings, are discussed. Copyright © 2013 Elsevier Inc. All rights reserved.

  19. Fluoxetine Facilitates Fear Extinction Through Amygdala Endocannabinoids

    Science.gov (United States)

    Gunduz-Cinar, Ozge; Flynn, Shaun; Brockway, Emma; Kaugars, Katherine; Baldi, Rita; Ramikie, Teniel S; Cinar, Resat; Kunos, George; Patel, Sachin; Holmes, Andrew

    2016-01-01

    Pharmacologically elevating brain endocannabinoids (eCBs) share anxiolytic and fear extinction-facilitating properties with classical therapeutics, including the selective serotonin reuptake inhibitor, fluoxetine. There are also known functional interactions between the eCB and serotonin systems and preliminary evidence that antidepressants cause alterations in brain eCBs. However, the potential role of eCBs in mediating the facilitatory effects of fluoxetine on fear extinction has not been established. Here, to test for a possible mechanistic contribution of eCBs to fluoxetine's proextinction effects, we integrated biochemical, electrophysiological, pharmacological, and behavioral techniques, using the extinction-impaired 129S1/Sv1mJ mouse strain. Chronic fluoxetine treatment produced a significant and selective increase in levels of anandamide in the BLA, and an associated decrease in activity of the anandamide-catabolizing enzyme, fatty acid amide hydrolase. Slice electrophysiological recordings showed that fluoxetine-induced increases in anandamide were associated with the amplification of eCB-mediated tonic constraint of inhibitory, but not excitatory, transmission in the BLA. Behaviorally, chronic fluoxetine facilitated extinction retrieval in a manner that was prevented by systemic or BLA-specific blockade of CB1 receptors. In contrast to fluoxetine, citalopram treatment did not increase BLA eCBs or facilitate extinction. Taken together, these findings reveal a novel, obligatory role for amygdala eCBs in the proextinction effects of a major pharmacotherapy for trauma- and stressor-related disorders and anxiety disorders. PMID:26514583

  20. Neural signals of vicarious extinction learning.

    Science.gov (United States)

    Golkar, Armita; Haaker, Jan; Selbing, Ida; Olsson, Andreas

    2016-10-01

    Social transmission of both threat and safety is ubiquitous, but little is known about the neural circuitry underlying vicarious safety learning. This is surprising given that these processes are critical to flexibly adapt to a changeable environment. To address how the expression of previously learned fears can be modified by the transmission of social information, two conditioned stimuli (CS + s) were paired with shock and the third was not. During extinction, we held constant the amount of direct, non-reinforced, exposure to the CSs (i.e. direct extinction), and critically varied whether another individual-acting as a demonstrator-experienced safety (CS + vic safety) or aversive reinforcement (CS + vic reinf). During extinction, ventromedial prefrontal cortex (vmPFC) responses to the CS + vic reinf increased but decreased to the CS + vic safety This pattern of vmPFC activity was reversed during a subsequent fear reinstatement test, suggesting a temporal shift in the involvement of the vmPFC. Moreover, only the CS + vic reinf association recovered. Our data suggest that vicarious extinction prevents the return of conditioned fear responses, and that this efficacy is reflected by diminished vmPFC involvement during extinction learning. The present findings may have important implications for understanding how social information influences the persistence of fear memories in individuals suffering from emotional disorders. © The Author (2016). Published by Oxford University Press. For Permissions, please email: journals.permissions@oup.com.

  1. Selection, subdivision and extinction and recolonization.

    Science.gov (United States)

    Cherry, Joshua L

    2004-02-01

    In a subdivided population, the interaction between natural selection and stochastic change in allele frequency is affected by the occurrence of local extinction and subsequent recolonization. The relative importance of selection can be diminished by this additional source of stochastic change in allele frequency. Results are presented for subdivided populations with extinction and recolonization where there is more than one founding allele after extinction, where these may tend to come from the same source deme, where the number of founding alleles is variable or the founders make unequal contributions, and where there is dominance for fitness or local frequency dependence. The behavior of a selected allele in a subdivided population is in all these situations approximately the same as that of an allele with different selection parameters in an unstructured population with a different size. The magnitude of the quantity N(e)s(e), which determines fixation probability in the case of genic selection, is always decreased by extinction and recolonization, so that deleterious alleles are more likely to fix and advantageous alleles less likely to do so. The importance of dominance or frequency dependence is also altered by extinction and recolonization. Computer simulations confirm that the theoretical predictions of both fixation probabilities and mean times to fixation are good approximations.

  2. Mass Extinctions and Biosphere-Geosphere Stability

    Science.gov (United States)

    Rothman, Daniel; Bowring, Samuel

    2015-04-01

    Five times in the past 500 million years, mass extinctions have resulted in the loss of greater than three-fourths of living species. Each of these events is associated with significant environmental change recorded in the carbon-isotopic composition of sedimentary rocks. There are also many such environmental events in the geologic record that are not associated with mass extinctions. What makes them different? Two factors appear important: the size of the environmental perturbation, and the time scale over which it occurs. We show that the natural perturbations of Earth's carbon cycle during the past 500 million years exhibit a characteristic rate of change over two orders of magnitude in time scale. This characteristic rate is consistent with the maximum rate that limits quasistatic (i.e., near steady-state) evolution of the carbon cycle. We identify this rate with marginal stability, and show that mass extinctions occur on the fast, unstable side of the stability boundary. These results suggest that the great extinction events of the geologic past, and potentially a "sixth extinction" associated with modern environmental change, are characterized by common mechanisms of instability.

  3. Quantitative analysis of forest fire extinction efficiency

    Directory of Open Access Journals (Sweden)

    Miguel E. Castillo-Soto

    2015-08-01

    Full Text Available Aim of study: Evaluate the economic extinction efficiency of forest fires, based on the study of fire combat undertaken by aerial and terrestrial means. Area of study, materials and methods: Approximately 112,000 hectares in Chile. Records of 5,876 forest fires that occurred between 1998 and 2009 were analyzed. The area further provides a validation sector for results, by incorporating databases for the years 2010 and 2012. The criteria used for measuring extinction efficiency were economic value of forestry resources, Contraction Factor analysis and definition of the extinction costs function. Main results: It is possible to establish a relationship between burnt area, extinction costs and economic losses. The method proposed may be used and adapted to other fire situations, requiring unit costs for aerial and terrestrial operations, economic value of the property to be protected and speed attributes of fire spread in free advance. Research highlights: The determination of extinction efficiency in containment works of forest fires and potential projection of losses, different types of plant fuel and local conditions favoring the spread of fire broaden the admissible ranges of a, φ and Ce considerably.

  4. Inhibition of serotonin transporters disrupts the enhancement of fear memory extinction by 3,4-methylenedioxymethamphetamine (MDMA).

    Science.gov (United States)

    Young, Matthew B; Norrholm, Seth D; Khoury, Lara M; Jovanovic, Tanja; Rauch, Sheila A M; Reiff, Collin M; Dunlop, Boadie W; Rothbaum, Barbara O; Howell, Leonard L

    2017-10-01

    3,4-Methylenedioxymethamphetamine (MDMA) persistently improves symptoms of post-traumatic stress disorder (PTSD) when combined with psychotherapy. Studies in rodents suggest that these effects can be attributed to enhancement of fear memory extinction. Therefore, MDMA may improve the effects of exposure-based therapy for PTSD, particularly in treatment-resistant patients. However, given MDMA's broad pharmacological profile, further investigation is warranted before moving to a complex clinical population. We aimed to inform clinical research by providing a translational model of MDMA's effect, and elucidating monoaminergic mechanisms through which MDMA enhances fear extinction. We explored the importance of monoamine transporters targeted by MDMA to fear memory extinction, as measured by reductions in conditioned freezing and fear-potentiated startle (FPS) in mice. Mice were treated with selective inhibitors of individual monoamine transporters prior to combined MDMA treatment and fear extinction training. MDMA enhanced the lasting extinction of FPS. Acute and chronic treatment with a 5-HT transporter (5-HTT) inhibitor blocked MDMA's effect on fear memory extinction. Acute inhibition of dopamine (DA) and norepinephrine (NE) transporters had no effect. 5-HT release alone did not enhance extinction. Blockade of MDMA's effect by 5-HTT inhibition also downregulated 5-HT 2A -mediated behavior, and 5-HT 2A antagonism disrupted MDMA's effect on extinction. We validate enhancement of fear memory extinction by MDMA in a translational behavioral model, and reveal the importance of 5-HTT and 5-HT 2A receptors to this effect. These observations support future clinical research of MDMA as an adjunct to exposure therapy, and provide important pharmacological considerations for clinical use in a population frequently treated with 5-HTT inhibitors.

  5. On the Kendall Correlation Coefficient

    OpenAIRE

    Stepanov, Alexei

    2015-01-01

    In the present paper, we first discuss the Kendall rank correlation coefficient. In continuous case, we define the Kendall rank correlation coefficient in terms of the concomitants of order statistics, find the expected value of the Kendall rank correlation coefficient and show that the later is free of n. We also prove that in continuous case the Kendall correlation coefficient converges in probability to its expected value. We then propose to consider the expected value of the Kendall rank ...

  6. Wavelength-Dependent Extinction and Grain Sizes in "Dippers"

    Science.gov (United States)

    Sitko, Michael; Russell, Ray W.; Long, Zachary; Bayyari, Ammar; Assani, Korash; Grady, Carol; Lisse, Carey Michael; Marengo, Massimo; Wisniewski, John

    2018-01-01

    We have examined inter-night variability of K2-discovered "Dippers" that are not close to being viewed edge-on (as determined from previously-reported ALMA images) using the SpeX spectrograph on NASA's Infrared Telescope facility (IRTF). The three objects observed were EPIC 203850058, EPIC 205151387, and EPIC 204638512 ( = 2MASS J16042165-2130284). Using the ratio of the fluxes from 0.7-2.4 microns between two successive nights, we find that in at least two cases, the extinction increased toward shorter wavelengths. In the case of EPIC 204638512, we find that the properties of the dust differ from that seen in the diffuse interstellar medium and denser molecular clouds. However, the grain properties needed to explain the extinction does resemble those used to model the disks of many young stellar objects. The best fit to the data on EPIC 204638512 includes grains at least 500 microns in size, but lacks grains smaller than 0.25 microns. Since EPIC 204638512 is seen nearly face-on, it is possible the grains are entrained in an accretion flow that preferentially destroys the smallest grains. However, we have no indication of significant gas accretion onto the star in the form of emission lines observed in young low-mass stars. But the He I line at 1.083 microns was seen to change from night to night, and showed a P Cygni profile on one night, suggesting the gas might be outflowing from regions near the star.

  7. Extinction times of epidemic outbreaks in networks.

    Science.gov (United States)

    Holme, Petter

    2013-01-01

    In the Susceptible-Infectious-Recovered (SIR) model of disease spreading, the time to extinction of the epidemics happens at an intermediate value of the per-contact transmission probability. Too contagious infections burn out fast in the population. Infections that are not contagious enough die out before they spread to a large fraction of people. We characterize how the maximal extinction time in SIR simulations on networks depend on the network structure. For example we find that the average distances in isolated components, weighted by the component size, is a good predictor of the maximal time to extinction. Furthermore, the transmission probability giving the longest outbreaks is larger than, but otherwise seemingly independent of, the epidemic threshold.

  8. Astrophysical life extinctions what killed the dinosaurs?

    CERN Document Server

    Dar, Arnon

    1999-01-01

    Geological records indicate that the exponential diversification of marine and continental life on Earth in the past 500 My was interrupted by many life extinctions. They also indicate that the major mass extinctions were correlated in time with large meteoritic impacts, gigantic volcanic eruptions, sea regressions and drastic changes in global climate. Some of these catastrophes coincided in time. The astrophysical life extinction mechanisms which were proposed so far, in particular, meteoritic impacts, nearby supernova explosions, passage through molecular or dark matter clouds, and Galactic gamma/cosmic ray bursts cannot explain the time coincidences between these catastrophes. However, recent observations suggest that many planetary-mass objects may be present in the outer solar system between the Kuiper belt and the Oort cloud. Gravitational perturbations may occasionally bring them into the inner solar system. Their passage near Earth could have generated gigantic tidal waves, large volcanic eruptions, ...

  9. Biotic extinctions by solar flares; and reply

    International Nuclear Information System (INIS)

    Beland, P.; Russell, D.A.; Crutzen, P.J.; Reid, G.C.

    1976-01-01

    Some comments are offered on the paper by Reid and others (nature 259:177 (1976)) in which a mechanism was suggested by which solar protons might catastrophically deplete atmospheric D 3 during a reversal of the Earth's geomagnetic field. Organisms would thereby be exposed to a more intense UV environment, leading to species extinctions. These authors assumed that during a reversal the geomagnetic field effectively disappears for about 1000 years, and also that solar flares sufficiently intense to cause extinctions occur at intervals of 1000 years or more. The validity of these assumptions is here examined using data on geomagnetic reversals identified over the past 75 M years, together with extinction data, and some anomalies are pointed out. A reply by Reid and others is appended. (U.K.)

  10. The fossil record of the sixth extinction.

    Science.gov (United States)

    Plotnick, Roy E; Smith, Felisa A; Lyons, S Kathleen

    2016-05-01

    Comparing the magnitude of the current biodiversity crisis with those in the fossil record is difficult without an understanding of differential preservation. Integrating data from palaeontological databases with information on IUCN status, ecology and life history characteristics of contemporary mammals, we demonstrate that only a small and biased fraction of threatened species (fossil record, compared with 20% of non-threatened species. We find strong taphonomic biases related to body size and geographic range. Modern species with a fossil record tend to be large and widespread and were described in the 19(th) century. The expected magnitude of the current extinction based only on species with a fossil record is about half of that of one based on all modern species; values for genera are similar. The record of ancient extinctions may be similarly biased, with many species having originated and gone extinct without leaving a tangible record. © 2016 John Wiley & Sons Ltd/CNRS.

  11. Extinction times of epidemic outbreaks in networks.

    Directory of Open Access Journals (Sweden)

    Petter Holme

    Full Text Available In the Susceptible-Infectious-Recovered (SIR model of disease spreading, the time to extinction of the epidemics happens at an intermediate value of the per-contact transmission probability. Too contagious infections burn out fast in the population. Infections that are not contagious enough die out before they spread to a large fraction of people. We characterize how the maximal extinction time in SIR simulations on networks depend on the network structure. For example we find that the average distances in isolated components, weighted by the component size, is a good predictor of the maximal time to extinction. Furthermore, the transmission probability giving the longest outbreaks is larger than, but otherwise seemingly independent of, the epidemic threshold.

  12. Mammal extinctions, body size, and paleotemperature.

    Science.gov (United States)

    Bown, T M; Holroyd, P A; Rose, K D

    1994-10-25

    There is a general inverse relationship between the natural logarithm of tooth area (a body size indicator) of some fossil mammals and paleotemperature during approximately 2.9 million years of the early Eocene in the Bighorn Basin of northwest Wyoming. When mean temperatures became warmer, tooth areas tended to become smaller. During colder times, larger species predominated; these generally became larger or remained the same size. Paleotemperature trends also markedly affected patterns of local (and, perhaps, regional) extinction and immigration. New species appeared as immigrants during or near the hottest (smaller forms) and coldest (larger forms) intervals. Paleotemperature trend reversals commonly resulted in the ultimate extinction of both small forms (during cooling intervals) and larger forms (during warming intervals). These immigrations and extinctions mark faunal turnovers that were also modulated by sharp increases in sediment accumulation rate.

  13. Interstellar extinction in the Taurus dark clouds

    International Nuclear Information System (INIS)

    Meistas, E.; Straizys, V.

    1981-01-01

    The results of photoelectric photometry of 89 stars in the Vilnius seven-color system in the area of the Taurus dark clouds with corrdinates (1950) 4sup(h)16sup(m)-4sup(h)33sup(m), +16 0 -+20 0 are presented. Photometric spectral types, absolute magnitude, color excesses, interstellar extinctions and distances of the stars are determined. The distance of the dark nebula is found to be 140 pc and is in a good agreement with the distance determined for the dark nebula Khavtassi 286, 278. The average extinction Asub(v) in the investigated area is of the order of 1.4. (author)

  14. Beam Extinction Monitoring in the Mu2e Experiment

    Energy Technology Data Exchange (ETDEWEB)

    Prebys, Eric [Fermilab; Bartoszek, Larry [Technicare; Gaponenko, Andrei [Fermilab; Kasper, Peter [Fermilab

    2015-06-01

    The Mu2e Experiment at Fermilab will search for the conversion of a muon to an electron in the field of an atomic nucleus with unprecedented sensitivity. The experiment requires a beam consisting of proton bunches approximately 200ns FW long, separated by 1.7 microseconds, with no out-of-time protons at the 10⁻¹⁰ fractional level. The verification of this level of extinction is very challenging. The proposed technique uses a special purpose spectrometer which will observe particles scattered from the production target of the experiment. The acceptance will be limited such that there will be no saturation effects from the in-time beam. The precise level and profile of the out-of-time beam can then be built up statistically, by integrating over many bunches.

  15. A comparison study for mass attenuation coefficients of some amino acids using MCNP code

    Energy Technology Data Exchange (ETDEWEB)

    Vahabi, Seyed Milad; Bahreynipour, Mostean; Shamsaie-Zafarghandi, Mojtaba [Amirkabir Univ. of Technology, Tehran (Iran, Islamic Republic of). Dept. of Energy Engineering and Physics

    2017-07-15

    In this study, a novel model of MCNP4C code reported recently was used to determine the photon mass attenuation coefficients of some amino acids at energies, 123, 360, 511, 662, 1170, 1280 and 1330 keV. The simulation results were compared with the XCOM data. It was indicated that the results were highly close to the calculated XCOM values. Obtained results were used to calculate the molar extinction coefficient. All the results showed the convenience and usefulness of the model in calculation of mass attenuation coefficients of amino acids.

  16. Theoretical Study of near Neutrality. II. Effect of Subdivided Population Structure with Local Extinction and Recolonization

    Science.gov (United States)

    Ohta, T.

    1992-01-01

    There are several unsolved problems concerning the model of nearly neutral mutations. One is the interaction of subdivided population structure and weak selection that spatially fluctuates. The model of nearly neutral mutations whose selection coefficient spatially fluctuates has been studied by adopting the island model with periodic extinction-recolonization. Both the number of colonies and the migration rate play significant roles in determining mutants' behavior, and selection is ineffective when the extinction-recolonization is frequent with low migration rate. In summary, the number of mutant substitutions decreases and the polymorphism increases by increasing the total population size, and/or decreasing the extinction-recolonization rate. However, by increasing the total size of the population, the mutant substitution rate does not become as low when compared with that in panmictic populations, because of the extinction-recolonization, especially when the migration rate is limited. It is also found that the model satisfactorily explains the contrasting patterns of molecular polymorphisms observed in sibling species of Drosophila, including heterozygosity, proportion of polymorphism and fixation index. PMID:1582566

  17. ULTRAVIOLET EXTINCTION AT HIGH GALACTIC LATITUDES

    Energy Technology Data Exchange (ETDEWEB)

    Peek, J. E. G.; Schiminovich, David, E-mail: jegpeek@gmail.com [Department of Astronomy, Columbia University, New York, NY (United States)

    2013-07-01

    In order to study the properties and effects of high Galactic latitude dust, we present an analysis of 373,303 galaxies selected from the Galaxy Evolution Explorer All-Sky Survey and Wide-field Infrared Explorer All-Sky Data Release. By examining the variation in aggregate ultraviolet colors and number density of these galaxies, we measure the extinction curve at high latitude. We additionally consider a population of spectroscopically selected galaxies from the Sloan Digital Sky Survey to measure extinction in the optical. We find that dust at high latitude is neither quantitatively nor qualitatively consistent with standard reddening laws. Extinction in the FUV and NUV is {approx}10% and {approx}35% higher than expected, with significant variation across the sky. We find that no single R{sub V} parameter fits both the optical and ultraviolet extinction at high latitude, and that while both show detectable variation across the sky, these variations are not related. We propose that the overall trends we detect likely stem from an increase in very small silicate grains in the interstellar medium.

  18. The Neandertal extinction in eastern Central Europe

    Czech Academy of Sciences Publication Activity Database

    Svoboda, Jiří

    2005-01-01

    Roč. 137, - (2005), s. 69-75 ISSN 1040-6182 Institutional research plan: CEZ:AV0Z80010507 Keywords : Central Europe Neandertals * early modern humans * extinction Subject RIV: AC - Archeology, Anthropology, Ethnology Impact factor: 1.210, year: 2005

  19. ULTRAVIOLET EXTINCTION AT HIGH GALACTIC LATITUDES

    International Nuclear Information System (INIS)

    Peek, J. E. G.; Schiminovich, David

    2013-01-01

    In order to study the properties and effects of high Galactic latitude dust, we present an analysis of 373,303 galaxies selected from the Galaxy Evolution Explorer All-Sky Survey and Wide-field Infrared Explorer All-Sky Data Release. By examining the variation in aggregate ultraviolet colors and number density of these galaxies, we measure the extinction curve at high latitude. We additionally consider a population of spectroscopically selected galaxies from the Sloan Digital Sky Survey to measure extinction in the optical. We find that dust at high latitude is neither quantitatively nor qualitatively consistent with standard reddening laws. Extinction in the FUV and NUV is ∼10% and ∼35% higher than expected, with significant variation across the sky. We find that no single R V parameter fits both the optical and ultraviolet extinction at high latitude, and that while both show detectable variation across the sky, these variations are not related. We propose that the overall trends we detect likely stem from an increase in very small silicate grains in the interstellar medium.

  20. Interstellar Extinction in the Gaia Photometric Systems

    Directory of Open Access Journals (Sweden)

    Bridžius A.

    2003-12-01

    Full Text Available Three medium-band photometric systems proposed for the Gaia space mission are intercompared in determining color excesses for stars of spectral classes from O to M at V = 18 mag. A possibility of obtaining a three-dimensional map of the interstellar extinction is discussed.

  1. Optical atmospheric extinction over Cerro Paranal

    NARCIS (Netherlands)

    Patat, F.; Moehler, S.; O'Brien, K.; Pompei, E.; Bensby, T.; Carraro, G.; de Ugarte Postigo, A.; Fox, A.; Gavignaud, I.; James, G.; Korhonen, H.; Ledoux, C.; Randall, S.; Sana, H.A.A.; Smoker, J.; Stefl, S.; Szeifert, T.

    2011-01-01

    Aims. The present study was conducted to determine the optical extinction curve for Cerro Paranal under typical clear-sky observing conditions, with the purpose of providing the community with a function to be used to correct the observed spectra, with an accuracy of 0.01 mag airmass-1.

  2. A new explanation of the extinction paradox

    International Nuclear Information System (INIS)

    Berg, M.J.; Sorensen, C.M.; Chakrabarti, A.

    2011-01-01

    This work presents a new explanation for the extinction paradox and shows that the canonical explanations are incorrect. This paradox refers to the large size limit of a particle's extinction cross section. It is called a paradox because the geometrical optics approximation, which should be valid in this limit, predicts a cross section that is half of the true value. The new explanation is achieved by formulating the scattered wave in terms of an integral over the particle's surface where the seemingly unrelated Ewald-Oseen theorem appears in the formulation. By expressing the cross section in terms of this surface integral, the Ewald-Oseen theorem is analytically connected to the cross section. Several illustrations are used to reveal the significance of this connection: The paradox is seen to be a consequence of the requirement that the incident wave be canceled within the particle by secondary radiation from its own internal field. Following this, the canonical explanations are examined to reveal serious problems. In the process, the same asymptotic extinction behavior is shown to occur for small highly refractive dielectric particles, and thus is not just a large particle size or small wavelength effect as is often stated. The traditional explanations cannot account for this behavior while the new one actually predicts it. All in all, this work constitutes a fundamental reworking of 60 years of accepted understanding for the cause of the asymptotic behavior of the extinction cross section.

  3. Time to extinction of bird populations

    NARCIS (Netherlands)

    Sæther, B-E.; Engen, S.; Møller, A.P.; Visser, M.E.; Matthysen, E.; Fiedler, W.; Lambrechts, M.M.; Becker, P.H.; Brommer, J.E.; Dickinson, J.; du Feu, C.; Gehlbach, F.R.; Merilä, J.; Rendell, W.; Robertson, R.J.; Thomson, D.L.; Török, J.

    2005-01-01

    The risk of extinction of populations has not previously been empirically related to parameters characterizing their population dynamics. To analyze this relationship, we simulated how the distribution of population dynamical characters changed as a function of time, in both the remaining and the

  4. Methylphenidate Enhances Extinction of Contextual Fear

    Science.gov (United States)

    Abraham, Antony D.; Cunningham, Christopher L.; Lattal, K. Matthew

    2012-01-01

    Methylphenidate (MPH, Ritalin) is a norepinephrine and dopamine transporter blocker that is widely used in humans for treatment of attention deficit disorder and narcolepsy. Although there is some evidence that targeted microinjections of MPH may enhance fear acquisition, little is known about the effect of MPH on fear extinction. Here, we show…

  5. Dust extinction in the first galaxies

    Science.gov (United States)

    Jaacks, Jason; Finkelstein, Steven L.; Bromm, Volker

    2018-04-01

    Using cosmological volume simulations and a custom built sub-grid model for Population III (Pop III) star formation, we examine the baseline dust extinction in the first galaxies due to Pop III metal enrichment in the first billion years of cosmic history. We find that although the most enriched, high-density lines of sight in primordial galaxies can experience a measurable amount of extinction from Pop III dust [E(B - V)max = 0.07, AV, max ≈ 0.28], the average extinction is very low with ≲ 10-3. We derive a power-law relationship between dark matter halo mass and extinction of E(B-V)∝ M_halo^{0.80}. Performing a Monte Carlo parameter study, we establish the baseline reddening of the ultraviolet spectra of dwarf galaxies at high redshift due to Pop III enrichment only. With this method, we find - 2.51 ± 0.07, which is both nearly halo mass and redshift independent.

  6. Stressor controllability modulates fear extinction in humans

    Science.gov (United States)

    Hartley, Catherine A.; Gorun, Alyson; Reddan, Marianne C.; Ramirez, Franchesca; Phelps, Elizabeth A.

    2014-01-01

    Traumatic events are proposed to play a role in the development of anxiety disorders, however not all individuals exposed to extreme stress experience a pathological increase in fear. Recent studies in animal models suggest that the degree to which one is able to control an aversive experience is a critical factor determining its behavioral consequences. In this study, we examined whether stressor controllability modulates subsequent conditioned fear expression in humans. Participants were randomly assigned to an escapable stressor condition, a yoked inescapable stressor condition, or a control condition involving no stress exposure. One week later, all participants underwent fear conditioning, fear extinction, and a test of extinction retrieval the following day. Participants exposed to inescapable stress showed impaired fear extinction learning and increased fear expression the following day. In contrast, escapable stress improved fear extinction and prevented the spontaneous recovery of fear. Consistent with the bidirectional controllability effects previously reported in animal models, these results suggest that one's degree of control over aversive experiences may be an important factor influencing the development of psychological resilience or vulnerability in humans. PMID:24333646

  7. Biological hierarchies and the nature of extinction.

    Science.gov (United States)

    Congreve, Curtis R; Falk, Amanda R; Lamsdell, James C

    2018-05-01

    Hierarchy theory recognises that ecological and evolutionary units occur in a nested and interconnected hierarchical system, with cascading effects occurring between hierarchical levels. Different biological disciplines have routinely come into conflict over the primacy of different forcing mechanisms behind evolutionary and ecological change. These disconnects arise partly from differences in perspective (with some researchers favouring ecological forcing mechanisms while others favour developmental/historical mechanisms), as well as differences in the temporal framework in which workers operate. In particular, long-term palaeontological data often show that large-scale (macro) patterns of evolution are predominantly dictated by shifts in the abiotic environment, while short-term (micro) modern biological studies stress the importance of biotic interactions. We propose that thinking about ecological and evolutionary interactions in a hierarchical framework is a fruitful way to resolve these conflicts. Hierarchy theory suggests that changes occurring at lower hierarchical levels can have unexpected, complex effects at higher scales due to emergent interactions between simple systems. In this way, patterns occurring on short- and long-term time scales are equally valid, as changes that are driven from lower levels will manifest in different forms at higher levels. We propose that the dual hierarchy framework fits well with our current understanding of evolutionary and ecological theory. Furthermore, we describe how this framework can be used to understand major extinction events better. Multi-generational attritional loss of reproductive fitness (MALF) has recently been proposed as the primary mechanism behind extinction events, whereby extinction is explainable solely through processes that result in extirpation of populations through a shutdown of reproduction. While not necessarily explicit, the push to explain extinction through solely population-level dynamics

  8. Biogeographic and bathymetric determinants of brachiopod extinction and survival during the Late Ordovician mass extinction

    DEFF Research Database (Denmark)

    Finnegan, Seth; Mac Ørum Rasmussen, Christian; Harper, David A. T.

    2016-01-01

    –Early Silurian genus extinctions and evaluate which extinction drivers are best supported by the data. The first (latest Katian) pulse of the LOME preferentially affected genera restricted to deeper waters or to relatively narrow (less than 35°) palaeolatitudinal ranges. This pattern is only observed...... in the latest Katian, suggesting that it reflects drivers unique to this interval. Extinction of exclusively deeper-water genera implies that changes in water mass properties such as dissolved oxygen content played an important role. Extinction of genera with narrow latitudinal ranges suggests that interactions...... between shifting climate zones and palaeobiogeography may also have been important. We test the latter hypothesis by estimating whether each genus would have been able to track habitats within its thermal tolerance range during the greenhouse–icehouse climate transition. Models including these estimates...

  9. Endangered Species and Natural Resource Exploitation: Extinction vs. Coexistence

    OpenAIRE

    Tsur, Yacov; Zemel, Amos

    1994-01-01

    The threat on the survival of animal species due to intensive use of natural resources is incorporated within resource management models, paying special attention to uncertainty regarding the conditions that lead to extinction. The manner in which the potential benefits forgone due to the species extinction (denoted extinction penalty) induce more conservative exploitation policies is studied in detail. When the extinction penalty is ignored, the optimal policy is to drive the resource stock ...

  10. Extinction models for cancer stem cell therapy

    Science.gov (United States)

    Sehl, Mary; Zhou, Hua; Sinsheimer, Janet S.; Lange, Kenneth L.

    2012-01-01

    Cells with stem cell-like properties are now viewed as initiating and sustaining many cancers. This suggests that cancer can be cured by driving these cancer stem cells to extinction. The problem with this strategy is that ordinary stem cells are apt to be killed in the process. This paper sets bounds on the killing differential (difference between death rates of cancer stem cells and normal stem cells) that must exist for the survival of an adequate number of normal stem cells. Our main tools are birth–death Markov chains in continuous time. In this framework, we investigate the extinction times of cancer stem cells and normal stem cells. Application of extreme value theory from mathematical statistics yields an accurate asymptotic distribution and corresponding moments for both extinction times. We compare these distributions for the two cell populations as a function of the killing rates. Perhaps a more telling comparison involves the number of normal stem cells NH at the extinction time of the cancer stem cells. Conditioning on the asymptotic time to extinction of the cancer stem cells allows us to calculate the asymptotic mean and variance of NH. The full distribution of NH can be retrieved by the finite Fourier transform and, in some parameter regimes, by an eigenfunction expansion. Finally, we discuss the impact of quiescence (the resting state) on stem cell dynamics. Quiescence can act as a sanctuary for cancer stem cells and imperils the proposed therapy. We approach the complication of quiescence via multitype branching process models and stochastic simulation. Improvements to the τ-leaping method of stochastic simulation make it a versatile tool in this context. We conclude that the proposed therapy must target quiescent cancer stem cells as well as actively dividing cancer stem cells. The current cancer models demonstrate the virtue of attacking the same quantitative questions from a variety of modeling, mathematical, and computational perspectives

  11. Quadrature formulas for Fourier coefficients

    KAUST Repository

    Bojanov, Borislav

    2009-09-01

    We consider quadrature formulas of high degree of precision for the computation of the Fourier coefficients in expansions of functions with respect to a system of orthogonal polynomials. In particular, we show the uniqueness of a multiple node formula for the Fourier-Tchebycheff coefficients given by Micchelli and Sharma and construct new Gaussian formulas for the Fourier coefficients of a function, based on the values of the function and its derivatives. © 2009 Elsevier B.V. All rights reserved.

  12. Malthusian Catastrophe: Species Extinction Caused By Oversized Population

    OpenAIRE

    Pan, Xubin

    2017-01-01

    There is one pseudo-extinction debt and four occurring conditions for real extinction debt. Since small and oversized populations have a high extinction risk, Pan threshold (upper limit) was calculated for Verhulst-Pear logistic growth model and logistic model with the Allee effect, an important parameter corresponding to Allee threshold (lower limit).

  13. Fibroblast Growth Factor-2 Alters the Nature of Extinction

    Science.gov (United States)

    Graham, Bronwyn M.; Richardson, Rick

    2011-01-01

    These experiments examined the effects of the NMDA-receptor (NMDAr) antagonist MK801 on reacquisition and re-extinction of a conditioned fear that had been previously extinguished before injection of fibroblast growth factor-2 (FGF2) or vehicle. Recent findings have shown that relearning and re-extinction, unlike initial learning and extinction,…

  14. Inhibition of Estradiol Synthesis Impairs Fear Extinction in Male Rats

    Science.gov (United States)

    Graham, Bronwyn M.; Milad, Mohammed R.

    2014-01-01

    Emerging research has demonstrated that the sex hormone estradiol regulates fear extinction in female rodents and women. Estradiol may also regulate fear extinction in males, given its role in synaptic plasticity in both sexes. Here we report that inhibition of estradiol synthesis during extinction training, via the aromatase inhibitor fadrozole,…

  15. Slower Reacquisition after Partial Extinction in Human Contingency Learning

    Science.gov (United States)

    Morís, Joaquín; Barberia, Itxaso; Vadillo, Miguel A.; Andrades, Ainhoa; López, Francisco J.

    2017-01-01

    Extinction is a very relevant learning phenomenon from a theoretical and applied point of view. One of its most relevant features is that relapse phenomena often take place once the extinction training has been completed. Accordingly, as extinction-based therapies constitute the most widespread empirically validated treatment of anxiety disorders,…

  16. A study of the fundamental characteristics of 2175A extinction

    Science.gov (United States)

    Cardelli, Jason A.; Savage, Blair D.

    1987-01-01

    The characteristics of interstellar extinction were studied in the region of the 2175 A feature for lines of sight which appear to exhibit unusually weak ultraviolet extinction. The analysis was based upon a parameterization of the observed extinction via fitting specific mathematical functions in order to determine the position and width of the 2175 A feature. The data are currently being analyzed.

  17. Selecting for extinction: nonrandom disease-associated extinction homogenizes amphibian biotas.

    Science.gov (United States)

    Smith, Kevin G; Lips, Karen R; Chase, Jonathan M

    2009-10-01

    Studying the patterns in which local extinctions occur is critical to understanding how extinctions affect biodiversity at local, regional and global spatial scales. To understand the importance of patterns of extinction at a regional spatial scale, we use data from extirpations associated with a widespread pathogenic agent of amphibian decline, Batrachochytrium dendrobatidis (Bd) as a model system. We apply novel null model analyses to these data to determine whether recent extirpations associated with Bd have resulted in selective extinction and homogenization of diverse tropical American amphibian biotas. We find that Bd-associated extinctions in this region were nonrandom and disproportionately, but not exclusively, affected low-occupancy and endemic species, resulting in homogenization of the remnant amphibian fauna. The pattern of extirpations also resulted in phylogenetic homogenization at the family level and ecological homogenization of reproductive mode and habitat association. Additionally, many more species were extirpated from the region than would be expected if extirpations occurred randomly. Our results indicate that amphibian declines in this region are an extinction filter, reducing regional amphibian biodiversity to highly similar relict assemblages and ultimately causing amplified biodiversity loss at regional and global scales.

  18. Coefficient Alpha: A Reliability Coefficient for the 21st Century?

    Science.gov (United States)

    Yang, Yanyun; Green, Samuel B.

    2011-01-01

    Coefficient alpha is almost universally applied to assess reliability of scales in psychology. We argue that researchers should consider alternatives to coefficient alpha. Our preference is for structural equation modeling (SEM) estimates of reliability because they are informative and allow for an empirical evaluation of the assumptions…

  19. Coefficient estimates of negative powers and inverse coefficients for ...

    Indian Academy of Sciences (India)

    and the inequality is sharp for the inverse of the Koebe function k(z) = z/(1 − z)2. An alternative approach to the inverse coefficient problem for functions in the class S has been investigated by Schaeffer and Spencer [27] and FitzGerald [6]. Although, the inverse coefficient problem for the class S has been completely solved ...

  20. Measuring of heat transfer coefficient

    DEFF Research Database (Denmark)

    Henningsen, Poul; Lindegren, Maria

    Subtask 3.4 Measuring of heat transfer coefficient Subtask 3.4.1 Design and setting up of tests to measure heat transfer coefficient Objective: Complementary testing methods together with the relevant experimental equipment are to be designed by the two partners involved in order to measure...... the heat transfer coefficient for a wide range of interface conditions in hot and warm forging processes. Subtask 3.4.2 Measurement of heat transfer coefficient The objective of subtask 3.4.2 is to determine heat transfer values for different interface conditions reflecting those typically operating in hot...

  1. Quenching of Einstein-coefficients by photons

    International Nuclear Information System (INIS)

    Aumayr, F.; Skinner, C.H.; Suckewer, S.; Princeton Univ., NJ; Lee, W.

    1991-02-01

    Experimental evidence is presented for the change of Einstein's A-coefficients for spontaneous transitions from the upper laser level of an argon ion laser discharge due to the presence of the high-intensity laser flux. To demonstrate that this quenching effect cannot be attributed to a reduction in self-absorption of the strong spontaneous emission line, absorption and line profile measurements have been performed. Computer modelling of the reduction of self absorption due to Rabi splitting also indicated that this effect is too small to explain the observed quenching of spontaneous line emissions. 13 refs., 11 figs

  2. Quenching of Einstein-coefficients by photons

    International Nuclear Information System (INIS)

    Aumayr, F.; Lee, W.; Skinner, C.H.; Suckewer, S.

    1991-03-01

    Experimental evidence is presented for the change of Einstein's A- coefficients for spontaneous transitions from the upper laser level of argon ion laser discharge due to the presence of the high- intensity laser flux. To demonstrate that this quenching effect cannot be attributed to a reduction in self-absorption of the strong spontaneous emission line, absorption and line profile measurements have been performed. Computer modelling of the reduction of self absorption due to Rabi splitting also indicated that this effect is too small to explain the observed quenching of spontaneous line emissions. 13 refs., 11 figs

  3. Uranium plasma emission coefficient in the visible and near UV.

    Science.gov (United States)

    Mack, J. M., Jr.; Usher, J. L.; Schneider, R. T.; Campbell, H. D.

    1971-01-01

    Measurements of the specific emission coefficient in the near ultra-violet and visible region of a uranium arc plasma are reported. Spatial unfolding of the intensity profile is used to determine the emission coefficient in the spectral range of 2000 A to 6000 A. The uranium partial pressure is estimated to range between .001 and .01 atmosphere, and the corresponding temperature range is 5000 - 10,000 K.

  4. Vertical profiles of urban aerosol complex refractive index in the frame of ESQUIF airborne measurements

    Science.gov (United States)

    Raut, J.-C.; Chazette, P.

    2008-02-01

    A synergy between lidar, sunphotometer and in situ measurements has been applied to airborne observations performed during the Etude et Simulation de la QUalité de l'air en Ile-de-France (ESQUIF), enabling the retrieval of vertical profiles for the aerosol complex refractive index (ACRI) and single-scattering albedo with a vertical resolution of 200 m over Paris area. The averaged value over the entire planetary boundary layer (PBL) for the ACRI is close to 1.51(±0.02)-i0.017(±0.003) at 532 nm. The single-scattering albedo of the corresponding aerosols is found to be ~0.9 at the same wavelength. A good agreement is found with previous studies for urban aerosols. A comparison of vertical profiles of ACRI with simulations combining in situ measurements and relative humidity (RH) profiles has highlighted a modification in aerosol optical properties linked to their history and the origin of the air mass. The determination of ACRI in the atmospheric column enabled to retrieve vertical profiles of extinction coefficient in accordance with lidar profiles measurements.

  5. Decline and local extinction of Fucales in French Riviera: the harbinger of future extinctions?

    Directory of Open Access Journals (Sweden)

    T. THIBAUT

    2014-03-01

    Full Text Available The French Riviera is one of the Mediterranean areas that has been longest and most thoroughly impacted by human activities. Fucales are long-lived, large-sized brown algae that constitute a good model for studying human impact on species diversity. We gathered all historical data (literature and herbarium vouchers, since the early 19th century, to reconstruct their distribution. The current distribution was established from a 7-year (2007-2013 survey of the 212-km shoreline (1/2 500 map, by means of boating, snorkelling and scuba diving. Overall, 18 taxa of Cystoseira and Sargassum have been reported. Upon comparison with historical data, 5 taxa were no longer observed (C. elegans, C. foeniculacea f. latiramosa, C. squarrosa, C. spinosa var. spinosa and S. hornschuchii while C. jabukae, previously unrecorded, was observed. In addition to these  taxa, probably extinct at a local scale, some taxa had suffered a dramatic decline (C. barbata f. barbata, C. crinita, C. spinosa var. compressa and S. acinarium or become nearly extinct (C. foeniculacea f. tenuiramosa. Three of them, which played in the past significant functional roles in coastal communities, can be considered as functionally extinct. Possible causes of decline and local extinction are discussed. A similar situation has already been reported, although at a much more local scale, in a variety of Mediterranean localities. The question therefore arises about the status of Fucales species in the Mediterranean: are some species on the brink of extinction? Is their extinction at the scale of the French Riviera the harbinger of their extinction Mediterranean–wide?

  6. Reactivated Memories Compete for Expression After Pavlovian Extinction

    Science.gov (United States)

    Laborda, Mario A.; Miller, Ralph R.

    2012-01-01

    We view the response decrement resulting from extinction treatment as an interference effect, in which the reactivated memory from acquisition competes with the reactivated memory from extinction for behavioral expression. For each of these memories, reactivation is proportional to both the strength of the stimulus-outcome association and the quality of the facilitatory cues for that association which are present at test. Here we review basic extinction and recovery-from-extinction phenomena, showing how these effects are explicable in this associative interference framework. Moreover, this orientation has and continues to dictate efficient manipulations for minimizing recovery from extinction. This in turn suggests procedures that might reduce relapse from exposure therapy for a number of psychological disorders. Some of these manipulations enhance the facilitatory cues from extinction that are present at test, others strengthen the extinction association (i.e., CS-no outcome), and yet others seem to work by a combination of these two processes. PMID:22326812

  7. Running from fear: Exercise modulation of fear extinction.

    Science.gov (United States)

    Tanner, Margaret K; Hake, Holly S; Bouchet, Courtney A; Greenwood, Benjamin N

    2018-03-31

    Extinction-based exposure therapy is the most common behavioral therapy for anxiety and trauma-related disorders, but fear tends to resurface even after successful extinction. Identification of novel strategies to enhance fear extinction and reduce fear relapse is of paramount importance to mental health. Exercise can enhance cognitive function, but it is not yet well understood whether exercise can be an effective augmentation strategy for fear extinction. In the current review, we present the current state of knowledge on the effects of exercise on fear extinction. Effects of exercise duration, explanations for conflicting results, and potential mechanisms, focusing on a hypothesized role for dopamine, are all discussed. We also provide new data suggesting that the timing in which acute exercise occurs relative to fear extinction, is a crucial variable in determining whether exercise can enhance fear extinction. Clinical implications and ideas to guide future research endeavors in this area are provided. Copyright © 2018 Elsevier Inc. All rights reserved.

  8. A global synthesis of plant extinction rates in urban areas.

    Science.gov (United States)

    Hahs, Amy K; McDonnell, Mark J; McCarthy, Michael A; Vesk, Peter A; Corlett, Richard T; Norton, Briony A; Clemants, Steven E; Duncan, Richard P; Thompson, Ken; Schwartz, Mark W; Williams, Nicholas S G

    2009-11-01

    Plant extinctions from urban areas are a growing threat to biodiversity worldwide. To minimize this threat, it is critical to understand what factors are influencing plant extinction rates. We compiled plant extinction rate data for 22 cities around the world. Two-thirds of the variation in plant extinction rates was explained by a combination of the city's historical development and the current proportion of native vegetation, with the former explaining the greatest variability. As a single variable, the amount of native vegetation remaining also influenced extinction rates, particularly in cities > 200 years old. Our study demonstrates that the legacies of landscape transformations by agrarian and urban development last for hundreds of years, and modern cities potentially carry a large extinction debt. This finding highlights the importance of preserving native vegetation in urban areas and the need for mitigation to minimize potential plant extinctions in the future.

  9. Role of the hippocampus in contextual modulation of fear extinction

    Institute of Scientific and Technical Information of China (English)

    Lingzhi Kong; Xihong Wu; Liang Li

    2008-01-01

    Fear extinction is an important form of emotional learning, and affects neural plasticity. Cue fear extinction is a classical form of inhibitory learning that can be used as an exposure-based treatment for phobia, because the long-term extinction memory produced during cue fear extinction can limit the over-expression of fear. The expression of this inhibitory memory partly depends on the context in which the extinction learning occurs. Studies such as transient inhibition, electrophysiology and brain imaging have proved that the hippocampus - an important structure in the limbic system - facilitates memory retrieval by contextual cues.Mediation of the hippocampus-medial prefrontal lobe circuit may be the neurobiological basis of this process.This article has reviewed the role of the hippocampus in the learning and retrieval of fear extinction.Contextual modulation of fear extinction may rely on a neural network consisting of the hippocampus, the medial prefrontal cortex and the amygdala.

  10. Epidemic extinction paths in complex networks

    Science.gov (United States)

    Hindes, Jason; Schwartz, Ira B.

    2017-05-01

    We study the extinction of long-lived epidemics on finite complex networks induced by intrinsic noise. Applying analytical techniques to the stochastic susceptible-infected-susceptible model, we predict the distribution of large fluctuations, the most probable or optimal path through a network that leads to a disease-free state from an endemic state, and the average extinction time in general configurations. Our predictions agree with Monte Carlo simulations on several networks, including synthetic weighted and degree-distributed networks with degree correlations, and an empirical high school contact network. In addition, our approach quantifies characteristic scaling patterns for the optimal path and distribution of large fluctuations, both near and away from the epidemic threshold, in networks with heterogeneous eigenvector centrality and degree distributions.

  11. Extinction of corrugated hydrogen/air flames

    International Nuclear Information System (INIS)

    Mizomoto, M.; Asaka, Y.; Ikai, S.; Law, C.K.

    1982-01-01

    Recent studies on flammability limits reveal the importance of flow nonuniformity, flame curvature, and molecular and thermal diffusivities in determining the extinguishability and the associated limits of premixed fuel/air flames. In particular, it is found that conditions which favor extinction of a lean flame may cause intensification of a rich flame. In the present study the authors have experimentally determined the extinction characteristics and limits of highly curved hydrogen/air flames as represented by the opening of bunsen flame tips. Results show that the tip opens at a constant fuel equivalence ratio of phi = 1.15, regardless of the velocity and uniformity of the upstream flow. This critical mixture concentration, while being rich, is still on the lean side of that corresponding to the maximum burning velocity (phi = 1.8), implying that for highly diffusive systems, the relevant reference concentration is that for maximum burning velocity instead of stoichiometry

  12. The galactic extinction towards Maffei 1

    International Nuclear Information System (INIS)

    Buta, R.J.; McCall, M.L.; McDonald Observatory, Austin, TX; Australian National Univ., Canberra. Mount Stromlo and Siding Spring Observatories)

    1983-01-01

    The extinction of Maffei 1 has been measured by two new techniques. First, BV aperture photometry has been performed to obtain the colour excess from standard aperture-colour relations for early-type galaxies. Secondly, millimetre and radio observations of galactic CO and HI have been used to calculate the total hydrogen column density along the line-of-sight, and thereby estimate the colour excess from the local dust-to-gas ratio. After consideration of all extinction measurements to date, it is concluded that Asub(v)=5.1+-0.2 mag. The isophotal diameter and the corrected apparent visual magnitude are estimated to be approx. 15 arcmin and approx. 6.3 respectively (assuming type E), making Maffei 1 one of the biggest and brightest galaxies in the sky. (author)

  13. Extinction risk under coloured environmental noise

    OpenAIRE

    Heino, M; Ripa, Jörgen; Kaitala, V

    2000-01-01

    Positively autocorrelated red environmental noise is characterized by a strong dependence of expected sample variance on sample length. This dependence has to be taken into account when assessing extinction risk under red and white uncorrelated environmental noise. To facilitate a comparison between red and white noise, their expected variances can be scaled to be equal, but only at a chosen time scale. We show with a simple one-dimensional population dynamics model that the different but equ...

  14. Immunological systematics of the extinct quagga (Equidae).

    Science.gov (United States)

    Lowenstein, J M; Ryder, O A

    1985-09-15

    It has been debated whether the extinct quagga was a distinct fourth species of African zebra or whether it was merely the southern variant of the Plains zebra (Equus burchelli). Using a radioimmunoassay (RIA) technique, we have shown that proteins remaining in quagga skins from museums are much more similar to serum proteins of the Plains zebra than to those of the other two extant zebras.

  15. Rewinding the process of mammalian extinction

    OpenAIRE

    Saragusty, J.; Diecke, S.; Drukker, M.; Durrant, B.; Friedrich Ben-Nun, I.; Galli, C.; Goeritz, F.; Hayashi, K.; Hermes, R.; Holtze, S.; Johnson, S.; Lazzari, G.; Loi, P.; Loring, J.F.; Okita, K.

    2016-01-01

    With only three living individuals left on this planet, the northern white rhinoceros (Ceratotherium simum cottoni) could be considered doomed for extinction. It might still be possible, however, to rescue the (sub)species by combining novel stem cell and assisted reproductive technologies. To discuss the various practical options available to us, we convened a multidisciplinary meeting under the name "Conservation by Cellular Technologies." The outcome of this meeting and the proposed road m...

  16. Opportunities and costs for preventing vertebrate extinctions.

    Science.gov (United States)

    Conde, Dalia A; Colchero, Fernando; Güneralp, Burak; Gusset, Markus; Skolnik, Ben; Parr, Michael; Byers, Onnie; Johnson, Kevin; Young, Glyn; Flesness, Nate; Possingham, Hugh; Fa, John E

    2015-03-16

    Despite an increase in policy and management responses to the global biodiversity crisis, implementation of the 20 Aichi Biodiversity Targets still shows insufficient progress [1]. These targets, strategic goals defined by the United Nations Convention on Biological Diversity (CBD), address major causes of biodiversity loss in part by establishing protected areas (Target 11) and preventing species extinctions (Target 12). To achieve this, increased interventions will be required for a large number of sites and species. The Alliance for Zero Extinction (AZE) [2], a consortium of conservation-oriented organisations that aims to protect Critically Endangered and Endangered species restricted to single sites, has identified 920 species of mammals, birds, amphibians, reptiles, conifers and reef-building corals in 588 'trigger' sites [3]. These are arguably the most irreplaceable category of important biodiversity conservation sites. Protected area coverage of AZE sites is a key indicator of progress towards Target 11 [1]. Moreover, effective conservation of AZE sites is essential to achieve Target 12, as the loss of any of these sites would certainly result in the global extinction of at least one species [2]. However, averting human-induced species extinctions within AZE sites requires enhanced planning tools to increase the chances of success [3]. Here, we assess the potential for ensuring the long-term conservation of AZE vertebrate species (157 mammals, 165 birds, 17 reptiles and 502 amphibians) by calculating a conservation opportunity index (COI) for each species. The COI encompasses a set of measurable indicators that quantify the possibility of achieving successful conservation of a species in its natural habitat (COIh) and by establishing insurance populations in zoos (COIc). Copyright © 2015 Elsevier Ltd. All rights reserved.

  17. Parrots and macaws: Species in extinction danger?

    International Nuclear Information System (INIS)

    Castro ramirez, Jose; Moyano P, Edgar A

    1994-01-01

    The paper refers to the privileged position of Colombia due to their position in the tropic, the influence of two oceans, their wide hydrographic net, variety of climates, etc; they make that Colombia occupies first places in biodiversity; but due to the indiscriminate pruning of primary forest, they make that this enormous biological potential is seriously threatened, where many of its birds are in extinction road

  18. Sabine absorption coefficients to random incidence absorption coefficients

    DEFF Research Database (Denmark)

    Jeong, Cheol-Ho

    2014-01-01

    into random incidence absorption coefficients for porous absorbers are investigated. Two optimization-based conversion methods are suggested: the surface impedance estimation for locally reacting absorbers and the flow resistivity estimation for extendedly reacting absorbers. The suggested conversion methods...

  19. Pathways to extinction: beyond the error threshold.

    Science.gov (United States)

    Manrubia, Susanna C; Domingo, Esteban; Lázaro, Ester

    2010-06-27

    Since the introduction of the quasispecies and the error catastrophe concepts for molecular evolution by Eigen and their subsequent application to viral populations, increased mutagenesis has become a common strategy to cause the extinction of viral infectivity. Nevertheless, the high complexity of virus populations has shown that viral extinction can occur through several other pathways apart from crossing an error threshold. Increases in the mutation rate enhance the appearance of defective forms and promote the selection of mechanisms that are able to counteract the accelerated appearance of mutations. Current models of viral evolution take into account more realistic scenarios that consider compensatory and lethal mutations, a highly redundant genotype-to-phenotype map, rough fitness landscapes relating phenotype and fitness, and where phenotype is described as a set of interdependent traits. Further, viral populations cannot be understood without specifying the characteristics of the environment where they evolve and adapt. Altogether, it turns out that the pathways through which viral quasispecies go extinct are multiple and diverse.

  20. Interstellar Extinction in 20 Open Star Clusters

    Science.gov (United States)

    Rangwal, Geeta; Yadav, R. K. S.; Durgapal, Alok K.; Bisht, D.

    2017-12-01

    The interstellar extinction law in 20 open star clusters namely, Berkeley 7, Collinder 69, Hogg 10, NGC 2362, Czernik 43, NGC 6530, NGC 6871, Bochum 10, Haffner 18, IC 4996, NGC 2384, NGC 6193, NGC 6618, NGC 7160, Collinder 232, Haffner 19, NGC 2401, NGC 6231, NGC 6823, and NGC 7380 have been studied in the optical and near-IR wavelength ranges. The difference between maximum and minimum values of E(B - V) indicates the presence of non-uniform extinction in all the clusters except Collinder 69, NGC 2362, and NGC 2384. The colour excess ratios are consistent with a normal extinction law for the clusters NGC 6823, Haffner 18, Haffner 19, NGC 7160, NGC 6193, NGC 2401, NGC 2384, NGC 6871, NGC 7380, Berkeley 7, Collinder 69, and IC 4996. We have found that the differential colour-excess ΔE(B - V), which may be due to the occurrence of dust and gas inside the clusters, decreases with the age of the clusters. A spatial variation of colour excess is found in NGC 6193 in the sense that it decreases from east to west in the cluster region. For the clusters Berkeley 7, NGC 7380, and NGC 6871, a dependence of colour excess E(B - V) with spectral class and luminosity is observed. Eight stars in Collinder 232, four stars in NGC 6530, and one star in NGC 6231 have excess flux in near-IR. This indicates that these stars may have circumstellar material around them.

  1. Mathematical Modeling of Extinction of Inhomogeneous Populations

    Science.gov (United States)

    Karev, G.P.; Kareva, I.

    2016-01-01

    Mathematical models of population extinction have a variety of applications in such areas as ecology, paleontology and conservation biology. Here we propose and investigate two types of sub-exponential models of population extinction. Unlike the more traditional exponential models, the life duration of sub-exponential models is finite. In the first model, the population is assumed to be composed clones that are independent from each other. In the second model, we assume that the size of the population as a whole decreases according to the sub-exponential equation. We then investigate the “unobserved heterogeneity”, i.e. the underlying inhomogeneous population model, and calculate the distribution of frequencies of clones for both models. We show that the dynamics of frequencies in the first model is governed by the principle of minimum of Tsallis information loss. In the second model, the notion of “internal population time” is proposed; with respect to the internal time, the dynamics of frequencies is governed by the principle of minimum of Shannon information loss. The results of this analysis show that the principle of minimum of information loss is the underlying law for the evolution of a broad class of models of population extinction. Finally, we propose a possible application of this modeling framework to mechanisms underlying time perception. PMID:27090117

  2. Area-based assessment of extinction risk.

    Science.gov (United States)

    Hei, Fangliang

    2012-05-01

    Underpinning the International Union for Conservation of Nature (IUCN) Red List is the assessment of extinction risk as determined by the size and degree of loss of populations. The IUCN system lists a species as Critically Endangered, Endangered, or Vulnerable if its population size declines 80%, 50%, or 30% within a given time frame. However, effective implementation of the system faces substantial challenges and uncertainty because geographic scale data on population size and long-term dynamics are scarce. I develop a model to quantify extinction risk using a measure based on a species' distribution, a much more readily obtained quantity. The model calculates the loss of the area of occupancy that is equivalent to the loss of a given proportion of a population. It is a very simple yet general model that has no free parameters and is independent of scale. The model predicted well the distributions of 302 tree species at a local scale and the distributions of 348 species of North American land birds. This area-based model provides a solution to the long-standing problem for IUCN assessments of lack of data on population sizes, and thus it will contribute to facilitating the quantification of extinction risk worldwide.

  3. Permo-Triassic vertebrate extinctions: A program

    Science.gov (United States)

    Olson, E. C.

    1988-01-01

    Since the time of the Authors' study on this subject, a great deal of new information has become available. Concepts of the nature of extinctions have changed materially. The Authors' conclusion that a catastrophic event was not responsible for the extinction of vertebrates has modified to the extent that hypotheses involving either the impact of a massive extra-terrestrial body or volcanism provide plausible but not currently fully testable hypotheses. Stated changes resulted in a rapid decrease in organic diversity, as the ratio of origins of taxa to extinctions shifted from strongly positive to negative, with momentary equilibrium being reached at about the Permo-Triassic boundary. The proximate causes of the changes in the terrestrial biota appear to lie in two primary factors: (1) strong climatic changes (global mean temperatures, temperature ranges, humidity) and (2) susceptibility of the dominant vertebrates (large dicynodonts) and the glossopteris flora to disruption of the equlibrium of the world ecosystem. The following proximate causes have been proposed: (1) rhythmic fluctuations in solar radiation, (2) tectonic events as Pangea assembled, altering land-ocean relationships, patterns of wind and water circulation and continental physiography, (3) volcanism, and (4) changes subsequent to impacts of one or more massive extra terrestrial objects, bodies or comets. These hypotheses are discussed.

  4. Rewinding the process of mammalian extinction.

    Science.gov (United States)

    Saragusty, Joseph; Diecke, Sebastian; Drukker, Micha; Durrant, Barbara; Friedrich Ben-Nun, Inbar; Galli, Cesare; Göritz, Frank; Hayashi, Katsuhiko; Hermes, Robert; Holtze, Susanne; Johnson, Stacey; Lazzari, Giovanna; Loi, Pasqualino; Loring, Jeanne F; Okita, Keisuke; Renfree, Marilyn B; Seet, Steven; Voracek, Thomas; Stejskal, Jan; Ryder, Oliver A; Hildebrandt, Thomas B

    2016-07-01

    With only three living individuals left on this planet, the northern white rhinoceros (Ceratotherium simum cottoni) could be considered doomed for extinction. It might still be possible, however, to rescue the (sub)species by combining novel stem cell and assisted reproductive technologies. To discuss the various practical options available to us, we convened a multidisciplinary meeting under the name "Conservation by Cellular Technologies." The outcome of this meeting and the proposed road map that, if successfully implemented, would ultimately lead to a self-sustaining population of an extremely endangered species are outlined here. The ideas discussed here, while centered on the northern white rhinoceros, are equally applicable, after proper adjustments, to other mammals on the brink of extinction. Through implementation of these ideas we hope to establish the foundation for reversal of some of the effects of what has been termed the sixth mass extinction event in the history of Earth, and the first anthropogenic one. Zoo Biol. 35:280-292, 2016. © 2016 The Authors. Zoo Biology published by Wiley Periodicals, Inc. © 2016 The Authors. Zoo Biology published by Wiley Periodicals, Inc.

  5. Causes and timing of future biosphere extinctions

    Directory of Open Access Journals (Sweden)

    S. Franck

    2006-01-01

    Full Text Available We present a minimal model for the global carbon cycle of the Earth containing the reservoirs mantle, ocean floor, continental crust, biosphere, and the kerogen, as well as the combined ocean and atmosphere reservoir. The model is specified by introducing three different types of biosphere: procaryotes, eucaryotes, and complex multicellular life. During the entire existence of the biosphere procaryotes are always present. 2 Gyr ago eucaryotic life first appears. The emergence of complex multicellular life is connected with an explosive increase in biomass and a strong decrease in Cambrian global surface temperature at about 0.54 Gyr ago. In the long-term future the three types of biosphere will die out in reverse sequence of their appearance. We show that there is no evidence for an implosion-like extinction in contrast to the Cambrian explosion. In dependence of their temperature tolerance complex multicellular life and eucaryotes become extinct in about 0.8–1.2 Gyr and 1.3–1.5 Gyr, respectively. The ultimate life span of the biosphere is defined by the extinction of procaryotes in about 1.6 Gyr.

  6. Interstellar extinction and polarization in the infrared

    International Nuclear Information System (INIS)

    Martin, P.G.; Whittet, D.C.B.

    1990-01-01

    The wavelength dependences of interstellar continuum extinction and polarization in the range 0.35-5 microns are examined. The existence of a universal extinction curve with power law index of about 1.8 extending from the near-IR to at least 5 microns appears to be established for both diffuse and dense cloud dust. The polarization yields evidence for some degree of universality in the 1.6-5 micron regime which may be represented by a power law with index 1.5-2.0, encompassing that for extinction. The form of the polarization curve in the IR seems independent of the wavelength at which the degree of polarization peaks in the optical, implying that variations in that wavelength are caused by changes in the optical properties of the particle at blue-visible rather than IR wavelengths. It is argued that the more significant alterations of the grain size distribution from one environment to another occur for the smaller particles. 47 refs

  7. AN ANALYSIS OF THE SHAPES OF INTERSTELLAR EXTINCTION CURVES. VI. THE NEAR-IR EXTINCTION LAW

    International Nuclear Information System (INIS)

    Fitzpatrick, E. L.; Massa, D.

    2009-01-01

    We combine new observations from the Hubble Space Telescope's Advanced Camera of Survey with existing data to investigate the wavelength dependence of near-IR (NIR) extinction. Previous studies suggest a power law form for NIR extinction, with a 'universal' value of the exponent, although some recent observations indicate that significant sight line-to-sight line variability may exist. We show that a power-law model for the NIR extinction provides an excellent fit to most extinction curves, but that the value of the power, β, varies significantly from sight line to sight line. Therefore, it seems that a 'universal NIR extinction law' is not possible. Instead, we find that as β decreases, R(V) ≡ A(V)/E(B - V) tends to increase, suggesting that NIR extinction curves which have been considered 'peculiar' may, in fact, be typical for different R(V) values. We show that the power-law parameters can depend on the wavelength interval used to derive them, with the β increasing as longer wavelengths are included. This result implies that extrapolating power-law fits to determine R(V) is unreliable. To avoid this problem, we adopt a different functional form for NIR extinction. This new form mimics a power law whose exponent increases with wavelength, has only two free parameters, can fit all of our curves over a longer wavelength baseline and to higher precision, and produces R(V) values which are consistent with independent estimates and commonly used methods for estimating R(V). Furthermore, unlike the power-law model, it gives R(V)s that are independent of the wavelength interval used to derive them. It also suggests that the relation R(V) = -1.36 E(K-V)/(E(B-V)) - 0.79 can estimate R(V) to ±0.12. Finally, we use model extinction curves to show that our extinction curves are in accord with theoretical expectations, and demonstrate how large samples of observational quantities can provide useful constraints on the grain properties.

  8. Extinction of Chained Instrumental Behaviors: Effects of Procurement Extinction on Consumption Responding

    Science.gov (United States)

    Thrailkill, Eric A.; Bouton, Mark E.

    2015-01-01

    Instrumental behavior often consists of sequences or chains of responses that minimally include procurement behaviors that enable subsequent consumption behaviors. In such chains, behavioral units are linked by access to one another and eventually to a primary reinforcer, such as food or a drug. The present experiments examined the effects of extinguishing procurement responding on consumption responding after training of a discriminated heterogeneous instrumental chain. Rats learned to make a procurement response (e.g., pressing a lever) in the presence of a distinctive discriminative stimulus; making that response led to the presentation of a second discriminative stimulus that set the occasion for a consumption response (e.g., pulling a chain), which then produced a food-pellet reinforcer. Experiment 1 showed that extinction of either the full procurement-consumption chain or procurement alone weakened the consumption response tested in isolation. Experiment 2 replicated the procurement extinction effect and further demonstrated that the opportunity to make the procurement response, as opposed to simple exposure to the procurement stimulus alone, was required. In Experiment 3, rats learned 2 distinct discriminated heterogeneous chains; extinction of 1 procurement response specifically weakened the consumption response that had been associated with it. The results suggest that learning to inhibit the procurement response may produce extinction of consumption responding through mediated extinction. The experiments suggest the importance of an associative analysis of instrumental behavior chains. PMID:25915751

  9. Probabilistic optimization of safety coefficients

    International Nuclear Information System (INIS)

    Marques, M.; Devictor, N.; Magistris, F. de

    1999-01-01

    This article describes a reliability-based method for the optimization of safety coefficients defined and used in design codes. The purpose of the optimization is to determine the partial safety coefficients which minimize an objective function for sets of components and loading situations covered by a design rule. This objective function is a sum of distances between the reliability of the components designed using the safety coefficients and a target reliability. The advantage of this method is shown on the examples of the reactor vessel, a vapour pipe and the safety injection circuit. (authors)

  10. Quadrature formulas for Fourier coefficients

    KAUST Repository

    Bojanov, Borislav; Petrova, Guergana

    2009-01-01

    We consider quadrature formulas of high degree of precision for the computation of the Fourier coefficients in expansions of functions with respect to a system of orthogonal polynomials. In particular, we show the uniqueness of a multiple node

  11. Diffusion coefficient for anomalous transport

    International Nuclear Information System (INIS)

    1986-01-01

    A report on the progress towards the goal of estimating the diffusion coefficient for anomalous transport is given. The gyrokinetic theory is used to identify different time and length scale inherent to the characteristics of plasmas which exhibit anomalous transport

  12. One extinct turtle species less: Pelusios seychellensis is not extinct, it never existed.

    Directory of Open Access Journals (Sweden)

    Heiko Stuckas

    Full Text Available Pelusios seychellensis is thought to be a freshwater turtle species endemic to the island of Mahé, Seychelles. There are only three museum specimens from the late 19(th century known. The species has been never found again, despite intensive searches on Mahé. Therefore, P. seychellensis has been declared as "Extinct" by the IUCN and is the sole putatively extinct freshwater turtle species. Using DNA sequences of three mitochondrial genes of the historical type specimen and phylogenetic analyses including all other species of the genus, we provide evidence that the description of P. seychellensis was erroneously based on a widely distributed West African species, P. castaneus. Consequently, we synonymize the two species and delete P. seychellensis from the list of extinct chelonian species and from the faunal list of the Seychelles.

  13. Fuel Temperature Coefficient of Reactivity

    Energy Technology Data Exchange (ETDEWEB)

    Loewe, W.E.

    2001-07-31

    A method for measuring the fuel temperature coefficient of reactivity in a heterogeneous nuclear reactor is presented. The method, which is used during normal operation, requires that calibrated control rods be oscillated in a special way at a high reactor power level. The value of the fuel temperature coefficient of reactivity is found from the measured flux responses to these oscillations. Application of the method in a Savannah River reactor charged with natural uranium is discussed.

  14. Properties of Traffic Risk Coefficient

    Science.gov (United States)

    Tang, Tie-Qiao; Huang, Hai-Jun; Shang, Hua-Yan; Xue, Yu

    2009-10-01

    We use the model with the consideration of the traffic interruption probability (Physica A 387(2008)6845) to study the relationship between the traffic risk coefficient and the traffic interruption probability. The analytical and numerical results show that the traffic interruption probability will reduce the traffic risk coefficient and that the reduction is related to the density, which shows that this model can improve traffic security.

  15. A window of vulnerability: impaired fear extinction in adolescence.

    Science.gov (United States)

    Baker, Kathryn D; Den, Miriam L; Graham, Bronwyn M; Richardson, Rick

    2014-09-01

    There have been significant advances made towards understanding the processes mediating extinction of learned fear. However, despite being of clear theoretical and clinical significance, very few studies have examined fear extinction in adolescence, which is often described as a developmental window of vulnerability to psychological disorders. This paper reviews the relatively small body of research examining fear extinction in adolescence. A prominent finding of this work is that adolescents, both humans and rodents, exhibit a marked impairment in extinction relative to both younger (e.g., juvenile) and older (e.g., adult) groups. We then review some potential mechanisms that could produce the striking extinction deficit observed in adolescence. For example, one neurobiological candidate mechanism for impaired extinction in adolescence involves changes in the functional connectivity within the fear extinction circuit, particularly between prefrontal cortical regions and the amygdala. In addition, we review research on emotion regulation and attention processes that suggests that developmental changes in attention bias to threatening cues may be a cognitive mechanism that mediates age-related differences in extinction learning. We also examine how a differential reaction to chronic stress in adolescence impacts upon extinction retention during adolescence as well as in later life. Finally, we consider the findings of several studies illustrating promising approaches that overcome the typically-observed extinction impairments in adolescent rodents and that could be translated to human adolescents. Copyright © 2013 Elsevier Inc. All rights reserved.

  16. Cortisol modifies extinction learning of recently acquired fear in men

    Science.gov (United States)

    Hermann, Andrea; Stark, Rudolf; Wolf, Oliver Tobias

    2014-01-01

    Exposure therapy builds on the mechanism of fear extinction leading to decreased fear responses. How the stress hormone cortisol affects brain regions involved in fear extinction in humans is unknown. For this reason, we tested 32 men randomly assigned to receive either 30 mg hydrocortisone or placebo 45 min before fear extinction. In fear acquisition, a picture of a geometrical figure was either partially paired (conditioned stimulus; CS+) or not paired (CS−) with an electrical stimulation (unconditioned stimulus; UCS). In fear extinction, each CS was presented again, but no UCS occurred. Cortisol increased conditioned skin conductance responses in early and late extinction. In early extinction, higher activation towards the CS− than to the CS+ was found in the amygdala, hippocampus and posterior parahippocampal gyrus. This pattern might be associated with the establishment of a new memory trace. In late extinction, the placebo compared with the cortisol group displayed enhanced CS+/CS− differentiation in the amygdala, medial frontal cortex and nucleus accumbens. A change from early deactivation to late activation of the extinction circuit as seen in the placebo group seems to be needed to enhance extinction and to reduce fear. Cortisol appears to interfere with this process thereby impairing extinction of recently acquired conditioned fear. PMID:23945999

  17. Candesartan ameliorates impaired fear extinction induced by innate immune activation.

    Science.gov (United States)

    Quiñones, María M; Maldonado, Lizette; Velazquez, Bethzaly; Porter, James T

    2016-02-01

    Patients with post-traumatic stress disorder (PTSD) tend to show signs of a relatively increased inflammatory state suggesting that activation of the immune system may contribute to the development of PTSD. In the present study, we tested whether activation of the innate immune system can disrupt acquisition or recall of auditory fear extinction using an animal model of PTSD. Male adolescent rats received auditory fear conditioning in context A. The next day, an intraperitoneal injection of lipopolysaccharide (LPS; 100 μg/kg) prior to auditory fear extinction in context B impaired acquisition and recall of extinction. LPS (100 μg/kg) given after extinction training did not impair extinction recall suggesting that LPS did not affect consolidation of extinction. In contrast to cued fear extinction, contextual fear extinction was not affected by prior injection of LPS (100 μg/kg). Although LPS also reduced locomotion, we could dissociate the effects of LPS on extinction and locomotion by using a lower dose of LPS (50 μg/kg) which impaired locomotion without affecting extinction. In addition, 15 h after an injection of 250 μg/kg LPS in adult rats, extinction learning and recall were impaired without affecting locomotion. A sub-chronic treatment with candesartan, an angiotensin II type 1 receptor blocker, prevented the LPS-induced impairment of extinction in adult rats. Our results demonstrate that activation of the innate immune system can disrupt auditory fear extinction in adolescent and adult animals. These findings also provide direction for clinical studies of novel treatments that modulate the innate immune system for stress-related disorders like PTSD. Copyright © 2015 Elsevier Inc. All rights reserved.

  18. On the source of the dust extinction in type Ia supernovae and the discovery of anomalously strong Na I absorption

    Energy Technology Data Exchange (ETDEWEB)

    Phillips, M. M.; Morrell, Nidia; Hsiao, E. Y.; Campillay, Abdo; Contreras, Carlos [Carnegie Observatories, Las Campanas Observatory, Casilla 601, La Serena (Chile); Simon, Joshua D.; Burns, Christopher R.; Persson, Sven E.; Thompson, I. B.; Freedman, Wendy L. [Observatories of the Carnegie Institution for Science, 813 Santa Barbara St., Pasadena, CA 91101 (United States); Cox, Nick L. J. [Instituut voor Sterrenkunde, KU Leuven, Celestijnenlaan 200D bus 2401, 3001 Leuven (Belgium); Foley, Ryan J. [Harvard-Smithsonian Center for Astrophysics, 60 Garden Street, Cambridge, MA 02138 (United States); Karakas, Amanda I. [Research School of Astronomy and Astrophysics, The Australian National University, Weston, ACT 2611 (Australia); Patat, F. [European Southern Observatory (ESO), Karl Schwarschild Strasse 2, D-85748, Garching bei München (Germany); Sternberg, A. [Max Planck Institute for Astrophysics, Karl Schwarzschild Strasse 1, D-85741 Garching bei München (Germany); Williams, R. E. [Space Telescope Science Institute, 3700 San Martin Drive, Baltimore, MD 21218 (United States); Gal-Yam, A. [Benoziyo Center for Astrophysics, Faculty of Physics, Weizmann Institute of Science, Rehovot 76100 (Israel); Leonard, D. C. [Department of Astronomy, San Diego State University, San Diego, CA 92182 (United States); Stritzinger, Maximilian [Department of Physics and Astronomy, Aarhus University, Ny Munkegade 120, DK-8000 Aarhus C (Denmark); Folatelli, Gastón, E-mail: mmp@lco.cl [Kavli Institute for the Physics and Mathematics of the Universe, Todai Institutes for Advanced Study, the University of Tokyo, Kashiwa 277-8583 (Japan); and others

    2013-12-10

    High-dispersion observations of the Na I D λλ5890, 5896 and K I λλ7665, 7699 interstellar lines, and the diffuse interstellar band at 5780 Å in the spectra of 32 Type Ia supernovae are used as an independent means of probing dust extinction. We show that the dust extinction of the objects where the diffuse interstellar band at 5780 Å is detected is consistent with the visual extinction derived from the supernova colors. This strongly suggests that the dust producing the extinction is predominantly located in the interstellar medium of the host galaxies and not in circumstellar material associated with the progenitor system. One quarter of the supernovae display anomalously large Na I column densities in comparison to the amount of dust extinction derived from their colors. Remarkably, all of the cases of unusually strong Na I D absorption correspond to 'Blueshifted' profiles in the classification scheme of Sternberg et al. This coincidence suggests that outflowing circumstellar gas is responsible for at least some of the cases of anomalously large Na I column densities. Two supernovae with unusually strong Na I D absorption showed essentially normal K I column densities for the dust extinction implied by their colors, but this does not appear to be a universal characteristic. Overall, we find the most accurate predictor of individual supernova extinction to be the equivalent width of the diffuse interstellar band at 5780 Å, and provide an empirical relation for its use. Finally, we identify ways of producing significant enhancements of the Na abundance of circumstellar material in both the single-degenerate and double-degenerate scenarios for the progenitor system.

  19. Clustering Coefficients for Correlation Networks.

    Science.gov (United States)

    Masuda, Naoki; Sakaki, Michiko; Ezaki, Takahiro; Watanabe, Takamitsu

    2018-01-01

    Graph theory is a useful tool for deciphering structural and functional networks of the brain on various spatial and temporal scales. The clustering coefficient quantifies the abundance of connected triangles in a network and is a major descriptive statistics of networks. For example, it finds an application in the assessment of small-worldness of brain networks, which is affected by attentional and cognitive conditions, age, psychiatric disorders and so forth. However, it remains unclear how the clustering coefficient should be measured in a correlation-based network, which is among major representations of brain networks. In the present article, we propose clustering coefficients tailored to correlation matrices. The key idea is to use three-way partial correlation or partial mutual information to measure the strength of the association between the two neighboring nodes of a focal node relative to the amount of pseudo-correlation expected from indirect paths between the nodes. Our method avoids the difficulties of previous applications of clustering coefficient (and other) measures in defining correlational networks, i.e., thresholding on the correlation value, discarding of negative correlation values, the pseudo-correlation problem and full partial correlation matrices whose estimation is computationally difficult. For proof of concept, we apply the proposed clustering coefficient measures to functional magnetic resonance imaging data obtained from healthy participants of various ages and compare them with conventional clustering coefficients. We show that the clustering coefficients decline with the age. The proposed clustering coefficients are more strongly correlated with age than the conventional ones are. We also show that the local variants of the proposed clustering coefficients (i.e., abundance of triangles around a focal node) are useful in characterizing individual nodes. In contrast, the conventional local clustering coefficients were strongly

  20. Clustering Coefficients for Correlation Networks

    Directory of Open Access Journals (Sweden)

    Naoki Masuda

    2018-03-01

    Full Text Available Graph theory is a useful tool for deciphering structural and functional networks of the brain on various spatial and temporal scales. The clustering coefficient quantifies the abundance of connected triangles in a network and is a major descriptive statistics of networks. For example, it finds an application in the assessment of small-worldness of brain networks, which is affected by attentional and cognitive conditions, age, psychiatric disorders and so forth. However, it remains unclear how the clustering coefficient should be measured in a correlation-based network, which is among major representations of brain networks. In the present article, we propose clustering coefficients tailored to correlation matrices. The key idea is to use three-way partial correlation or partial mutual information to measure the strength of the association between the two neighboring nodes of a focal node relative to the amount of pseudo-correlation expected from indirect paths between the nodes. Our method avoids the difficulties of previous applications of clustering coefficient (and other measures in defining correlational networks, i.e., thresholding on the correlation value, discarding of negative correlation values, the pseudo-correlation problem and full partial correlation matrices whose estimation is computationally difficult. For proof of concept, we apply the proposed clustering coefficient measures to functional magnetic resonance imaging data obtained from healthy participants of various ages and compare them with conventional clustering coefficients. We show that the clustering coefficients decline with the age. The proposed clustering coefficients are more strongly correlated with age than the conventional ones are. We also show that the local variants of the proposed clustering coefficients (i.e., abundance of triangles around a focal node are useful in characterizing individual nodes. In contrast, the conventional local clustering coefficients

  1. Clustering Coefficients for Correlation Networks

    Science.gov (United States)

    Masuda, Naoki; Sakaki, Michiko; Ezaki, Takahiro; Watanabe, Takamitsu

    2018-01-01

    Graph theory is a useful tool for deciphering structural and functional networks of the brain on various spatial and temporal scales. The clustering coefficient quantifies the abundance of connected triangles in a network and is a major descriptive statistics of networks. For example, it finds an application in the assessment of small-worldness of brain networks, which is affected by attentional and cognitive conditions, age, psychiatric disorders and so forth. However, it remains unclear how the clustering coefficient should be measured in a correlation-based network, which is among major representations of brain networks. In the present article, we propose clustering coefficients tailored to correlation matrices. The key idea is to use three-way partial correlation or partial mutual information to measure the strength of the association between the two neighboring nodes of a focal node relative to the amount of pseudo-correlation expected from indirect paths between the nodes. Our method avoids the difficulties of previous applications of clustering coefficient (and other) measures in defining correlational networks, i.e., thresholding on the correlation value, discarding of negative correlation values, the pseudo-correlation problem and full partial correlation matrices whose estimation is computationally difficult. For proof of concept, we apply the proposed clustering coefficient measures to functional magnetic resonance imaging data obtained from healthy participants of various ages and compare them with conventional clustering coefficients. We show that the clustering coefficients decline with the age. The proposed clustering coefficients are more strongly correlated with age than the conventional ones are. We also show that the local variants of the proposed clustering coefficients (i.e., abundance of triangles around a focal node) are useful in characterizing individual nodes. In contrast, the conventional local clustering coefficients were strongly

  2. Measurement of heat transfer coefficient using termoanemometry methods

    Science.gov (United States)

    Dančová, P.; Sitek, P.; Vít, T.

    2014-03-01

    This work deals with a measurement of heat transfer from a heated flat plate on which a synthetic jet impacts perpendicularly. Measurement of a heat transfer coefficient (HTC) is carried out using the hot wire anemometry method with glue film probe Dantec 55M47. The paper brings also results of velocity profiles measurements and turbulence intensity calculations.

  3. Measurement of heat transfer coefficient using termoanemometry methods

    Directory of Open Access Journals (Sweden)

    Dančová P.

    2014-03-01

    Full Text Available This work deals with a measurement of heat transfer from a heated flat plate on which a synthetic jet impacts perpendicularly. Measurement of a heat transfer coefficient (HTC is carried out using the hot wire anemometry method with glue film probe Dantec 55M47. The paper brings also results of velocity profiles measurements and turbulence intensity calculations.

  4. Converting Sabine absorption coefficients to random incidence absorption coefficients

    DEFF Research Database (Denmark)

    Jeong, Cheol-Ho

    2013-01-01

    are suggested: An optimization method for the surface impedances for locally reacting absorbers, the flow resistivity for extendedly reacting absorbers, and the flow resistance for fabrics. With four porous type absorbers, the conversion methods are validated. For absorbers backed by a rigid wall, the surface...... coefficients to random incidence absorption coefficients are proposed. The overestimations of the Sabine absorption coefficient are investigated theoretically based on Miki's model for porous absorbers backed by a rigid wall or an air cavity, resulting in conversion factors. Additionally, three optimizations...... impedance optimization produces the best results, while the flow resistivity optimization also yields reasonable results. The flow resistivity and flow resistance optimization for extendedly reacting absorbers are also found to be successful. However, the theoretical conversion factors based on Miki's model...

  5. Spectral dependence of backscattering coefficient of mixed phase clouds over West Africa measured with two-wavelength Raman polarization lidar: Features attributed to ice-crystals corner reflection

    Science.gov (United States)

    Veselovskii, I.; Goloub, P.; Podvin, T.; Tanre, D.; Ansmann, A.; Korenskiy, M.; Borovoi, A.; Hu, Q.; Whiteman, D. N.

    2017-11-01

    The existing models predict that corner reflection (CR) of laser radiation by simple ice crystals of perfect shape, such as hexagonal columns or plates, can provide a significant contribution to the ice cloud backscattering. However in real clouds the CR effect may be suppressed due to crystal deformation and surface roughness. In contrast to the extinction coefficient, which is spectrally independent, consideration of diffraction associated with CR results in a spectral dependence of the backscattering coefficient. Thus measuring the spectral dependence of the cloud backscattering coefficient, the contribution of CR can be identified. The paper presents the results of profiling of backscattering coefficient (β) and particle depolarization ratio (δ) of ice and mixed-phase clouds over West Africa by means of a two-wavelength polarization Mie-Raman lidar operated at 355 nm and 532 nm during the SHADOW field campaign. The lidar observations were performed at a slant angle of 43 degree off zenith, thus CR from both randomly oriented crystals and oriented plates could be analyzed. For the most of the observations the cloud backscatter color ratio β355/β532 was close to 1.0, and no spectral features that might indicate the presence of CR of randomly oriented crystals were revealed. Still, in two measurement sessions we observed an increase of backscatter color ratio to a value of nearly 1.3 simultaneously with a decrease of the spectral depolarization ratio δ355/δ532 ratio from 1.0 to 0.8 inside the layers containing precipitating ice crystals. We attribute these changes in optical properties to corner reflections by horizontally oriented ice plates.

  6. Ecological selectivity of the emerging mass extinction in the oceans.

    Science.gov (United States)

    Payne, Jonathan L; Bush, Andrew M; Heim, Noel A; Knope, Matthew L; McCauley, Douglas J

    2016-09-16

    To better predict the ecological and evolutionary effects of the emerging biodiversity crisis in the modern oceans, we compared the association between extinction threat and ecological traits in modern marine animals to associations observed during past extinction events using a database of 2497 marine vertebrate and mollusc genera. We find that extinction threat in the modern oceans is strongly associated with large body size, whereas past extinction events were either nonselective or preferentially removed smaller-bodied taxa. Pelagic animals were victimized more than benthic animals during previous mass extinctions but are not preferentially threatened in the modern ocean. The differential importance of large-bodied animals to ecosystem function portends greater future ecological disruption than that caused by similar levels of taxonomic loss in past mass extinction events. Copyright © 2016, American Association for the Advancement of Science.

  7. Aging accelerates memory extinction and impairs memory restoration in Drosophila.

    Science.gov (United States)

    Chen, Nannan; Guo, Aike; Li, Yan

    2015-05-15

    Age-related memory impairment (AMI) is a phenomenon observed from invertebrates to human. Memory extinction is proposed to be an active inhibitory modification of memory, however, whether extinction is affected in aging animals remains to be elucidated. Employing a modified paradigm for studying memory extinction in fruit flies, we found that only the stable, but not the labile memory component was suppressed by extinction, thus effectively resulting in higher memory loss in aging flies. Strikingly, young flies were able to fully restore the stable memory component 3 h post extinction, while aging flies failed to do so. In conclusion, our findings reveal that both accelerated extinction and impaired restoration contribute to memory impairment in aging animals. Copyright © 2015 Elsevier Inc. All rights reserved.

  8. Reintroducing resurrected species: selecting DeExtinction candidates.

    Science.gov (United States)

    Seddon, Philip J; Moehrenschlager, Axel; Ewen, John

    2014-03-01

    Technological advances have raised the controversial prospect of resurrecting extinct species. Species DeExtinction should involve more than the production of biological orphans to be scrutinized in the laboratory or zoo. If DeExtinction is to realize its stated goals of deep ecological enrichment, then resurrected animals must be translocated (i.e., released within suitable habitat). Therefore, DeExtinction is a conservation translocation issue and the selection of potential DeExtinction candidates must consider the feasibility and risks associated with reintroduction. The International Union for the Conservation of Nature (IUCN) Guidelines on Reintroductions and Other Conservation Translocations provide a framework for DeExtinction candidate selection. We translate these Guidelines into ten questions to be addressed early on in the selection process to eliminate unsuitable reintroduction candidates. We apply these questions to the thylacine, Yangtze River Dolphin, and Xerces blue butterfly. Copyright © 2014 Elsevier Ltd. All rights reserved.

  9. Noradrenergic Modulation of Fear Conditioning and Extinction.

    Science.gov (United States)

    Giustino, Thomas F; Maren, Stephen

    2018-01-01

    The locus coeruleus norepinephrine (LC-NE) system plays a broad role in learning and memory. Here we begin with an overview of the LC-NE system. We then consider how both direct and indirect manipulations of the LC-NE system affect cued and contextual aversive learning and memory. We propose that NE dynamically modulates Pavlovian conditioning and extinction, either promoting or impairing learning aversive processes under different levels of behavioral arousal. We suggest that under high levels of stress (e.g., during/soon after fear conditioning) the locus coeruleus (LC) promotes cued fear learning by enhancing amygdala function while simultaneously blunting prefrontal function. Under low levels of arousal, the LC promotes PFC function to promote downstream inhibition of the amygdala and foster the extinction of cued fear. Thus, LC-NE action on the medial prefrontal cortex (mPFC) might be described by an inverted-U function such that it can either enhance or hinder learning depending on arousal states. In addition, LC-NE seems to be particularly important for the acquisition, consolidation and extinction of contextual fear memories. This may be due to dense adrenoceptor expression in the hippocampus (HPC) which encodes contextual information, and the ability of NE to regulate long-term potentiation (LTP). Moreover, recent work reveals that the diversity of LC-NE functions in aversive learning and memory are mediated by functionally heterogeneous populations of LC neurons that are defined by their projection targets. Hence, LC-NE function in learning and memory is determined by projection-specific neuromodulation that accompanies various states of behavioral arousal.

  10. Late Pennsylvanian climate changes and palynomorph extinctions

    Energy Technology Data Exchange (ETDEWEB)

    Kosanke, R.M.; Cecil, C.B. [US Geological Survey, Denver, CO (United States)

    1996-01-01

    A major floral change occurs in the Upper Pennsylvanian strata in the Midcontinent, Illinois basin, and in the northern Appalachian basin of eastern United States. Lycospora spp. (derived from arborescent lycopsids) became extinct along with some other palynomorph taxa. This investigation is concerned with the importance of this major floral change. Samples were studied from western Pennsylvania, eastern Ohio, and West Virgina (from a previous study) cover the stratigraphic interval from the Upper Freeport coal bed, uppermost part of the Allegheny Formation, to the Mahoning, Mason, Brush Creek, Wilgus, and Anderson coal beds in the lower part of the Conemaugh Formation. The floral change occurs either at or below the accepted Desmoinesian-Missourian boundary in the Midcontinent and Illinois basin, whereas in the northern Appalachians this change occurs in the lower part of the Conemaugh Formation, between the Mahoning and Brush Creek coal beds, or when the Mason is present, between the Mahoning and Mason coal beds. The first coal bed above the extinction of Lycospora spp. is dominated by the palynomorph taxon Endosporites globiformis which is derived from a heterosporous, herbaceous lycopsid. However, Sigillaria, another arborescent lycopsid, did not become extinct at this time as evidenced by the presence of the palynomorph genus Crassispora which is derived from Sigillaria. The reason for the survival of Sigillaria is now known, but it may have been able to adapt, in a limited fashion, to some sort of specialized microenvironment. The ferns, based on palynomorph occurrence, become numerically more important throughout the balance of the Conemaugh Formation, and dominate the Pittsburgh No. 8 and Pomeroy coal beds in the overlying Monogahela Formation.

  11. Fire extinction utilizing carbon dioxide hydrate

    Energy Technology Data Exchange (ETDEWEB)

    Hatakeyama, T.; Aida, E.; Yokomori, T.; Ohmura, R.; Ueda, T. [Keio Univ., Hiyoshi, Kohoku-ku, Yokohama (Japan)

    2008-07-01

    Clathrate hydrates formed with nonflammable gases may be suitable for use as fire extinguishing agents because dissociation of the hydrates results in the temperature decrease in the combustion field and the nonflammable gases released from the dissociated hydrates prevent the supply of the oxygen to the combustion field. This paper discussed experiments in which ordinary ice and dry ice were used to evaluate the performance of CO{sub 2} hydrate as a fire extinguishing agent. The paper described the apparatus and procedure for the preparation of CO{sub 2} hydrate crystals. A schematic of the reactor to form CO{sub 2} hydrate and a photograph of CO{sub 2} hydrate crystal formed in the study were also presented. Other illustrations, photographs, and tables that were presented included a schematic diagram of the experimental apparatus used for the flame extinction experiments; a photograph of CO{sub 2} hydrate powder; sequential video graphs of the flame extinction by the supply of CO{sub 2} hydrate crystals to the methanol pool flame and the relevant illustration; and heat of CO{sub 2} hydrate dissociation, water vaporization and sublimation of dry ice. It was concluded that the critical mass of the CO{sub 2} hydrate required to extinguish a flame was much less than that of ordinary ice, indicating the superiority of CO{sub 2} hydrate to the ice. In addition, the experiments also revealed that the size of the CO{sub 2} hydrate particles had a significant effect on the performance of flame extinction. 5 refs., 2 tabs., 7 figs.

  12. Noradrenergic Modulation of Fear Conditioning and Extinction

    Directory of Open Access Journals (Sweden)

    Thomas F. Giustino

    2018-03-01

    Full Text Available The locus coeruleus norepinephrine (LC-NE system plays a broad role in learning and memory. Here we begin with an overview of the LC-NE system. We then consider how both direct and indirect manipulations of the LC-NE system affect cued and contextual aversive learning and memory. We propose that NE dynamically modulates Pavlovian conditioning and extinction, either promoting or impairing learning aversive processes under different levels of behavioral arousal. We suggest that under high levels of stress (e.g., during/soon after fear conditioning the locus coeruleus (LC promotes cued fear learning by enhancing amygdala function while simultaneously blunting prefrontal function. Under low levels of arousal, the LC promotes PFC function to promote downstream inhibition of the amygdala and foster the extinction of cued fear. Thus, LC-NE action on the medial prefrontal cortex (mPFC might be described by an inverted-U function such that it can either enhance or hinder learning depending on arousal states. In addition, LC-NE seems to be particularly important for the acquisition, consolidation and extinction of contextual fear memories. This may be due to dense adrenoceptor expression in the hippocampus (HPC which encodes contextual information, and the ability of NE to regulate long-term potentiation (LTP. Moreover, recent work reveals that the diversity of LC-NE functions in aversive learning and memory are mediated by functionally heterogeneous populations of LC neurons that are defined by their projection targets. Hence, LC-NE function in learning and memory is determined by projection-specific neuromodulation that accompanies various states of behavioral arousal.

  13. Rho Ophiuchi Cloud Core Extinction Map

    Science.gov (United States)

    Gibson, D. J.; Rudolph, A.; Barsony, M.

    1997-12-01

    We present an extinction map of a one square degree region ( ~ 2.2pc square) of the core of the star-forming region rho Ophiuchi derived by the method of star counts. Photometry from the near-infrared J, H, and K band images of Barsony et al. (1997) provided the stellar catalog for this study. From this map an estimate of the mass of the region is made and compared with previous estimates from other methods. Reference Barsony, M., Kenyon, S.J., Lada, E.A., & Teuben, P.J. 1997, ApJS, 112, 109

  14. Power coefficient anomaly in JOYO

    Energy Technology Data Exchange (ETDEWEB)

    Yamamoto, H

    1980-12-15

    Operation of the JOYO experimental fast reactor with the MK-I core has been divided into two phases: (1) 50 MWt power ascension and operation; and (2) 75 MWt power ascension and operation. The 50 MWt power-up tests were conducted in August 1978. In these tests, the measured reactivity loss due to power increases from 15 MWt to 50 MWt was 0.28% ..delta.. K/K, and agreed well with the predicted value of 0.27% ..delta.. K/K. The 75 MWt power ascension tests were conducted in July-August 1979. In the process of the first power increase above 50 MWt to 65 MWt conducted on July 11, 1979, an anomalously large negative power coefficient was observed. The value was about twice the power coefficient values measured in the tests below 50 MW. In order to reproduce the anomaly, the reactor power was decreased and again increased up to the maximum power of 65 MWt. However, the large negative power coefficient was not observed at this time. In the succeeding power increase from 65 MWt to 75 MWt, a similar anomalous power coefficient was again observed. This anomaly disappeared in the subsequent power ascensions to 75 MWt, and the magnitude of the power coefficient gradually decreased with power cycles above the 50 MWt level.

  15. The risk of extinction - the mutational meltdown or the overpopulation

    OpenAIRE

    Malarz, K.

    2006-01-01

    The phase diagrams survival-extinction for the Penna model with parameters: (mutations rate)-(birth rate), (mutation rate)-(harmful mutations threshold), (harmful mutation threshold)-(minimal reproduction age) are presented. The extinction phase may be caused by either mutational meltdown or overpopulation. When the Verhulst factor is responsible for removing only newly born babies and does not act on adults the overpopulation is avoided and only genetic factors may lead to species extinction.

  16. Variation of the extinction law in the Trifid nebula

    OpenAIRE

    Cambrésy, L.; Rho, J.; Marshall, D. J.; Reach, W. T.

    2011-01-01

    Context. In the past few years, the extinction law has been measured in the infrared wavelengths for various molecular clouds and different laws have been obtained. Aims. In this paper we seek variations of the extinction law within the Trifid nebula region. Such variations would demonstrate local dust evolution linked to variation of the environment parameters such as the density or the interstellar radiation field. Methods. The extinction values, A_λ/A_v, are obtained using the 2MASS, UKIDS...

  17. Dynamics of Population on the Verge of Extinction

    OpenAIRE

    Oborny, B.; Meszena, G.; Szabo, G.

    2005-01-01

    Theoretical considerations suggest that extinction in dispersal-limited populations is necessarily a threshold-like process that is analogous to a critical phase transition in physics. We use this analogy to find robust, common features in the dynamics of extinctions, and suggest early warning signals which may indicate that a population is endangered. As the critical threshold of extinction is approached, the population spontaneously fragments into discrete subpopulations and, consequently, ...

  18. Extinction and dust properties in a clumpy medium

    OpenAIRE

    Scicluna, P.; Siebenmorgen, R.

    2015-01-01

    (abridged) The dust content of the universe is primarily explored via its interaction with stellar photons, producing interstellar extinction. However, owing to the physical extension of the observing beam, observations may detect scattered photons, resulting in a change in the observed (or effective) extinction, depending on the spatial distribution of the dust and the resolution of the instrument. We investigate the influence of clumpy dust distributions on effective extinction toward embed...

  19. Effects of overtraining on extinction in newts (Cynops pyrrhogaster)

    OpenAIRE

    Shibasaki, Masahiro; Ishida, Masato

    2012-01-01

    The overtraining extinction effect (OEE), a phenomenon in which extended training facilitates extinction, has been found in mammals and reptiles. However, fish have never shown OEE. No study has yet investigated OEE in newts, a representative amphibian species. We tested whether newts, Cynops pyrrhogaster, show OEE in a straight-array task. All animals received five trials per day and were given a piece of dried worm during reinforced trials. They showed significant acquisition and extinction...

  20. Psychological and neural mechanisms of experimental extinction: a selective review.

    Science.gov (United States)

    Delamater, Andrew R; Westbrook, R Frederick

    2014-02-01

    The present review examines key psychological concepts in the study of experimental extinction and implications these have for an understanding of the underlying neurobiology of extinction learning. We suggest that many of the signature characteristics of extinction learning (spontaneous recovery, renewal, reinstatement, rapid reacquisition) can be accommodated by the standard associative learning theory assumption that extinction results in partial erasure of the original learning together with new inhibitory learning. Moreover, we consider recent behavioral and neural evidence that supports the partial erasure view of extinction, but also note shortcomings in our understanding of extinction circuits as these relate to the negative prediction error concept. Recent work suggests that common prediction error and stimulus-specific prediction error terms both may be required to explain neural plasticity both in acquisition and extinction learning. In addition, we suggest that many issues in the content of extinction learning have not been fully addressed in current research, but that neurobiological approaches should be especially helpful in addressing such issues. These include questions about the nature of extinction learning (excitatory CS-No US, inhibitory CS-US learning, occasion setting processes), especially as this relates to studies of the micro-circuitry of extinction, as well as its representational content (sensory, motivational, response). An additional understudied problem in extinction research is the role played by attention processes and their underlying neural networks, although some research and theory converge on the idea that extinction is accompanied by attention decrements (i.e., habituation-like processes). Copyright © 2013 Elsevier Inc. All rights reserved.

  1. Unbounded autocatalytic growth on diffusive substrate: The extinction transition

    International Nuclear Information System (INIS)

    Moalem, Sasi; Shnerb, Nadav M.

    2007-01-01

    The effect of diffusively correlated spatial fluctuations on the proliferation-extinction transition of autocatalytic agents is investigated numerically. Reactants adaptation to spatio-temporal active regions is shown to lead to proliferation even if the mean field rate equations predict extinction, in agreement with previous theoretical predictions. While in the proliferation phase the system admits a typical time scale that dictates the exponential growth, the extinction times distribution obeys a power law at the parameter region considered

  2. Fear extinction requires infralimbic cortex projections to the basolateral amygdala.

    Science.gov (United States)

    Bloodgood, Daniel W; Sugam, Jonathan A; Holmes, Andrew; Kash, Thomas L

    2018-03-06

    Fear extinction involves the formation of a new memory trace that attenuates fear responses to a conditioned aversive memory, and extinction impairments are implicated in trauma- and stress-related disorders. Previous studies in rodents have found that the infralimbic prefrontal cortex (IL) and its glutamatergic projections to the basolateral amygdala (BLA) and basomedial amygdala (BMA) instruct the formation of fear extinction memories. However, it is unclear whether these pathways are exclusively involved in extinction, or whether other major targets of the IL, such as the nucleus accumbens (NAc) also play a role. To address this outstanding issue, the current study employed a combination of electrophysiological and chemogenetic approaches in mice to interrogate the role of IL-BLA and IL-NAc pathways in extinction. Specifically, we used patch-clamp electrophysiology coupled with retrograde tracing to examine changes in neuronal activity of the IL and prelimbic cortex (PL) projections to both the BLA and NAc following fear extinction. We found that extinction produced a significant increase in the intrinsic excitability of IL-BLA projection neurons, while extinction appeared to reverse fear-induced changes in IL-NAc projection neurons. To establish a causal counterpart to these observations, we then used a pathway-specific Designer Receptors Exclusively Activated by Designer Drugs (DREADD) strategy to selectively inhibit PFC-BLA projection neurons during extinction acquisition. Using this approach, we found that DREADD-mediated inhibition of PFC-BLA neurons during extinction acquisition impaired subsequent extinction retrieval. Taken together, our findings provide further evidence for a critical contribution of the IL-BLA neural circuit to fear extinction.

  3. Glutamatergic Targets for Enhancing Extinction Learning in Drug Addiction

    OpenAIRE

    Cleva, R.M; Gass, J.T; Widholm, J.J; Olive, M.F

    2010-01-01

    The persistence of the motivational salience of drug-related environmental cues and contexts is one of the most problematic obstacles to successful treatment of drug addiction. Behavioral approaches to extinguishing the salience of drug-associated cues, such as cue exposure therapy, have generally produced disappointing results which have been attributed to, among other things, the context specificity of extinction and inadequate consolidation of extinction learning. Extinction of any behavio...

  4. The risk of extinction - the mutational meltdown or the overpopulation.

    Science.gov (United States)

    Malarz, Krzysztof

    2007-04-01

    The phase diagrams survival-extinction for the Penna model with parameters: (mutations rate)-(birth rate), (mutation rate)-(harmful mutations threshold), (harmful mutation threshold)-(minimal reproduction age) are presented. The extinction phase may be caused by either mutational meltdown or overpopulation. When the Verhulst factor is responsible for removing only newly born babies and does not act on adults the overpopulation is avoided and only genetic factors may lead to species extinction.

  5. Geographies of Conservation I: De-extinction and Precision Conservation

    OpenAIRE

    Adams, William Mark

    2016-01-01

    Extinction has long been a central concern in biodiversity conservation. Today, de-extinction offers interesting possibilities of restoring charismatic species and ecosystem function, but also risks and costs. Most de-extinction depends on genetic engineering and synthetic biology. These technologies are also proposed for use in ‘gene tweaking’ in wild species to enhance their chance of survival. Within conservation, the resulting debates pit an optimistic world of high-tech ‘precision con...

  6. Late Quaternary extinctions: The promise of TAMS 14C dating

    International Nuclear Information System (INIS)

    Martin, P.S.

    1987-01-01

    In the last 30 000 years late Quaternary extinctions eliminated over two-thirds of the large land mammals of America and Australia and most of the endemic land vertebrates on oceanic islands. Specimens of extinct animals yielding too little organic material for measurement in decay counters are suitable for TAMS dating. Initial results support older evidence of an extinction chronology that was catastrophic regionally, transgressive globally, and linked to the spread of prehistoric people. (orig.)

  7. Compound stimulus extinction reduces spontaneous recovery in humans

    OpenAIRE

    Coelho, Cesar A.O.; Dunsmoor, Joseph E.; Phelps, Elizabeth A.

    2015-01-01

    Fear-related behaviors are prone to relapse following extinction. We tested in humans a compound extinction design (“deepened extinction”) shown in animal studies to reduce post-extinction fear recovery. Adult subjects underwent fear conditioning to a visual and an auditory conditioned stimulus (CSA and CSB, respectively) separately paired with an electric shock. The target CS (CSA) was extinguished alone followed by compound presentations of the extinguished CSA and nonextinguished CSB. Reco...

  8. The Effect of Size and Ecology on Extinction Susceptibility

    Science.gov (United States)

    Huynh, C.; Yuan, A.; Heim, N.; Payne, J.

    2015-12-01

    Although life on Earth first emerged as prokaryotic organisms, it eventually evolved into billions of different species. However, extinctions on Earth, especially the five mass extinctions, have decimated species. So what leads to a species survival or demise during a mass extinction? Are certain species more susceptible to extinctions based on their size and ecology? For this project, we focused on the data of marine animals. To examine the impact of size and ecology on a species's likelihood of survival, we compared the sizes and ecologies of the survivors and victims of the five mass extinctions. The ecology, or life mode, of a genus consists of the combination of tiering, motility, and feeding mechanism. Tiering refers to the animal's typical location in the water column and sediments, motility refers to its ability to move, and feeding mechanism describes the way the organism eats; together, they describe the animal's behavior. We analyzed the effect of ecology on survival using logistic regression, which compares life mode to the success or failure of a genus during each mass extinction interval. For organism size, we found the extinct organisms' mean size (both volume and length) and compared it with the average size of survivors on a graph. Our results show that while surviving genera of mass extinctions tended to be slightly larger than those that went extinct, there was no significant difference. Even though the Permian (Changhsingian) and Triassic (Rhaetian) extinctions had larger surviving species, likewise the difference was small. Ecology had a more obvious impact on the likelihood of survival; fast-moving, predatory pelagic organisms were the most likely to go extinct, while sedentary, infaunal suspension feeders had the greatest chances of survival. Overall, ecology played a greater role than size in determining the survival of a species. With this information, we can use ecology to predict which species would survive future extinctions.

  9. MALDI imaging facilitates new topical drug development process by determining quantitative skin distribution profiles.

    Science.gov (United States)

    Bonnel, David; Legouffe, Raphaël; Eriksson, André H; Mortensen, Rasmus W; Pamelard, Fabien; Stauber, Jonathan; Nielsen, Kim T

    2018-04-01

    Generation of skin distribution profiles and reliable determination of drug molecule concentration in the target region are crucial during the development process of topical products for treatment of skin diseases like psoriasis and atopic dermatitis. Imaging techniques like mass spectrometric imaging (MSI) offer sufficient spatial resolution to generate meaningful distribution profiles of a drug molecule across a skin section. In this study, we use matrix-assisted laser desorption/ionization mass spectrometry imaging (MALDI-MSI) to generate quantitative skin distribution profiles based on tissue extinction coefficient (TEC) determinations of four different molecules in cross sections of human skin explants after topical administration. The four drug molecules: roflumilast, tofacitinib, ruxolitinib, and LEO 29102 have different physicochemical properties. In addition, tofacitinib was administrated in two different formulations. The study reveals that with MALDI-MSI, we were able to observe differences in penetration profiles for both the four drug molecules and the two formulations and thereby demonstrate its applicability as a screening tool when developing a topical drug product. Furthermore, the study reveals that the sensitivity of the MALDI-MSI techniques appears to be inversely correlated to the drug molecules' ability to bind to the surrounding tissues, which can be estimated by their Log D values. Graphical abstract.

  10. Extinction in the Galaxy from surface brightnesses of ESO-LV galaxies : Testing "standard" extinction maps

    NARCIS (Netherlands)

    Choloniewski, J.; Valentijn, E. A.

    A new method for the determination of the extinction in the Galaxy is proposed. The method uses surface brightnesses of external galaxies in the B and R-bands. The observational data have been taken from the ESO-LV galaxy catalog. As a first application of our model we derive the ratio of R-band to

  11. Brain structural connectivity and context-dependent extinction memory.

    Science.gov (United States)

    Hermann, Andrea; Stark, Rudolf; Blecker, Carlo R; Milad, Mohammed R; Merz, Christian J

    2017-08-01

    Extinction of conditioned fear represents an important mechanism in the treatment of anxiety disorders. Return of fear after successful extinction or exposure therapy in patients with anxiety disorders might be linked to poor temporal or contextual generalization of extinction due to individual differences in brain structural connectivity. The goal of this magnetic resonance imaging study was therefore to investigate the association of context-dependent extinction recall with brain structural connectivity. Diffusion-tensor imaging was used to determine the fractional anisotropy as a measure of white matter structural integrity of fiber tracts connecting central brain regions of the fear and extinction circuit (uncinate fasciculus, cingulum). Forty-five healthy men participated in a two-day fear conditioning experiment with fear acquisition in context A and extinction learning in context B on the first day. Extinction recall in the extinction context as well as renewal in the acquisition context and a novel context C took place one day later. Renewal of conditioned fear (skin conductance responses) in the acquisition context was associated with higher structural integrity of the hippocampal part of the cingulum. Enhanced structural integrity of the cingulum might be related to stronger hippocampal modulation of the dorsal anterior cingulate cortex, a region important for modulating conditioned fear output by excitatory projections to the amygdala. This finding underpins the crucial role of individual differences in the structural integrity of relevant fiber tracts for context-dependent extinction recall and return of fear after exposure therapy in anxiety disorders. © 2017 Wiley Periodicals, Inc.

  12. Bilateral Alternating Auditory Stimulations Facilitate Fear Extinction and Retrieval

    Directory of Open Access Journals (Sweden)

    Sarah Boukezzi

    2017-06-01

    Full Text Available Disruption of fear conditioning, its extinction and its retrieval are at the core of posttraumatic stress disorder (PTSD. Such deficits, especially fear extinction delay, disappear after alternating bilateral stimulations (BLS during eye movement desensitization and reprocessing (EMDR therapy. An animal model of fear recovery, based on auditory cued fear conditioning and extinction learning, recently showed that BLS facilitate fear extinction and fear extinction retrieval. Our goal was to determine if these previous results found in animals can be reproduced in humans. Twenty-two healthy participants took part in a classical fear conditioning, extinction, and extinction recall paradigm. Behavioral responses (fear expectations as well as psychophysiological measures (skin conductance responses, SCRs were recorded. The results showed a significant fear expectation decrease during fear extinction with BLS. Additionally, SCR for fear extinction retrieval were significantly lower with BLS. Our results demonstrate the importance of BLS to reduce negative emotions, and provide a successful model to further explore the neural mechanisms underlying the sole BLS effect in the EMDR.

  13. Experience with dynamic reinforcement rates decreases resistance to extinction.

    Science.gov (United States)

    Craig, Andrew R; Shahan, Timothy A

    2016-03-01

    The ability of organisms to detect reinforcer-rate changes in choice preparations is positively related to two factors: the magnitude of the change in rate and the frequency with which rates change. Gallistel (2012) suggested similar rate-detection processes are responsible for decreases in responding during operant extinction. Although effects of magnitude of change in reinforcer rate on resistance to extinction are well known (e.g., the partial-reinforcement-extinction effect), effects of frequency of changes in rate prior to extinction are unknown. Thus, the present experiments examined whether frequency of changes in baseline reinforcer rates impacts resistance to extinction. Pigeons pecked keys for variable-interval food under conditions where reinforcer rates were stable and where they changed within and between sessions. Overall reinforcer rates between conditions were controlled. In Experiment 1, resistance to extinction was lower following exposure to dynamic reinforcement schedules than to static schedules. Experiment 2 showed that resistance to presession feeding, a disruptor that should not involve change-detection processes, was unaffected by baseline-schedule dynamics. These findings are consistent with the suggestion that change detection contributes to extinction. We discuss implications of change-detection processes for extinction of simple and discriminated operant behavior and relate these processes to the behavioral-momentum based approach to understanding extinction. © 2016 Society for the Experimental Analysis of Behavior.

  14. Has the Earth's sixth mass extinction already arrived?

    Science.gov (United States)

    Barnosky, Anthony D; Matzke, Nicholas; Tomiya, Susumu; Wogan, Guinevere O U; Swartz, Brian; Quental, Tiago B; Marshall, Charles; McGuire, Jenny L; Lindsey, Emily L; Maguire, Kaitlin C; Mersey, Ben; Ferrer, Elizabeth A

    2011-03-03

    Palaeontologists characterize mass extinctions as times when the Earth loses more than three-quarters of its species in a geologically short interval, as has happened only five times in the past 540 million years or so. Biologists now suggest that a sixth mass extinction may be under way, given the known species losses over the past few centuries and millennia. Here we review how differences between fossil and modern data and the addition of recently available palaeontological information influence our understanding of the current extinction crisis. Our results confirm that current extinction rates are higher than would be expected from the fossil record, highlighting the need for effective conservation measures.

  15. Spatially Synchronous Extinction of Species under External Forcing

    Science.gov (United States)

    Amritkar, R. E.; Rangarajan, Govindan

    2006-06-01

    More than 99% of the species that ever existed on the surface of the Earth are now extinct and their extinction on a global scale has been a puzzle. One may think that a species under an external threat may survive in some isolated locations leading to the revival of the species. Using a general model we show that, under a common external forcing, the species with a quadratic saturation term first undergoes spatial synchronization and then extinction. The effect can be observed even when the external forcing acts only on some locations provided the dynamics contains a synchronizing term. Absence of the quadratic saturation term can help the species to avoid extinction.

  16. Variation in extinction risk among birds: chance or evolutionary predisposition?

    Science.gov (United States)

    Bennett, P. M.; Owens, I. P. F.

    1997-01-01

    Collar et al. (1994) estimate that of the 9,672 extant species of bird, 1,111 are threatened by extinction. Here, we test whether these threatened species are simply a random sample of birds, or whether there is something about their biology that predisposes them to extinction. We ask three specific questions. First, is extinction risk randomly distributed among families? Second, which families, if any, contain more, or less, threatened species than would be expected by chance? Third, is variation between taxa in extinction risk associated with variation in either body size or fecundity? Extinction risk is not randomly distributed among families. The families which contain significantly more threatened species than expected are the parrots (Psittacidae), pheasants and allies (Phasianidae), albatrosses and allies (Procellariidae), rails (Rallidae), cranes (Gruidae), cracids (Cracidae), megapodes (Megapodidae) and pigeons (Columbidae). The only family which contains significantly fewer threatened species than expected is the woodpeckers (Picidae). Extinction risk is also not distributed randomly with respect to fecundity or body size. Once phylogeny has been controlled for, increases in extinction risk are independently associated with increases in body size and decreases in fecundity. We suggest that this is because low rates of fecundity, which evolved many tens of millions of years ago, predisposed certain lineages to extinction. Low-fecundity populations take longer to recover if they are reduced to small sizes and are, therefore, more likely to go extinct if an external force causes an increase in the rate of mortality, thereby perturbing the natural balance between fecundity and mortality.

  17. Extinction of Learned Fear Induces Hippocampal Place Cell Remapping

    Science.gov (United States)

    Wang, Melissa E.; Yuan, Robin K.; Keinath, Alexander T.; Ramos Álvarez, Manuel M.

    2015-01-01

    The extinction of learned fear is a hippocampus-dependent process thought to embody new learning rather than erasure of the original fear memory, although it is unknown how these competing contextual memories are represented in the hippocampus. We previously demonstrated that contextual fear conditioning results in hippocampal place cell remapping and long-term stabilization of novel representations. Here we report that extinction learning also induces place cell remapping in C57BL/6 mice. Specifically, we observed cells that preferentially remapped during different stages of learning. While some cells remapped in both fear conditioning and extinction, others responded predominantly during extinction, which may serve to modify previous representations as well as encode new safe associations. Additionally, we found cells that remapped primarily during fear conditioning, which could facilitate reacquisition of the original fear association. Moreover, we also observed cells that were stable throughout learning, which may serve to encode the static aspects of the environment. The short-term remapping observed during extinction was not found in animals that did not undergo fear conditioning, or when extinction was conducted outside of the conditioning context. Finally, conditioning and extinction produced an increase in spike phase locking to the theta and gamma frequencies. However, the degree of remapping seen during conditioning and extinction only correlated with gamma synchronization. Our results suggest that the extinction learning is a complex process that involves both modification of pre-existing memories and formation of new ones, and these traces coexist within the same hippocampal representation. PMID:26085635

  18. Genetic disruptions of Drosophila Pavlovian learning leave extinction learning intact.

    Science.gov (United States)

    Qin, H; Dubnau, J

    2010-03-01

    Individuals who experience traumatic events may develop persistent posttraumatic stress disorder. Patients with this disorder are commonly treated with exposure therapy, which has had limited long-term success. In experimental neurobiology, fear extinction is a model for exposure therapy. In this behavioral paradigm, animals are repeatedly exposed in a safe environment to the fearful stimulus, which leads to greatly reduced fear. Studying animal models of extinction already has lead to better therapeutic strategies and development of new candidate drugs. Lack of a powerful genetic model of extinction, however, has limited progress in identifying underlying molecular and genetic factors. In this study, we established a robust behavioral paradigm to study the short-term effect (acquisition) of extinction in Drosophila melanogaster. We focused on the extinction of olfactory aversive 1-day memory with a task that has been the main workhorse for genetics of memory in flies. Using this paradigm, we show that extinction can inhibit each of two genetically distinct forms of consolidated memory. We then used a series of single-gene mutants with known impact on associative learning to examine the effects on extinction. We find that extinction is intact in each of these mutants, suggesting that extinction learning relies on different molecular mechanisms than does Pavlovian learning.

  19. Analysis of internal conversion coefficients

    International Nuclear Information System (INIS)

    Coursol, N.; Gorozhankin, V.M.; Yakushev, E.A.; Briancon, C.; Vylov, Ts.

    2000-01-01

    An extensive database has been assembled that contains the three most widely used sets of calculated internal conversion coefficients (ICC): [Hager R.S., Seltzer E.C., 1968. Internal conversion tables. K-, L-, M-shell Conversion coefficients for Z=30 to Z=103, Nucl. Data Tables A4, 1-237; Band I.M., Trzhaskovskaya M.B., 1978. Tables of gamma-ray internal conversion coefficients for the K-, L- and M-shells, 10≤Z≤104, Special Report of Leningrad Nuclear Physics Institute; Roesel F., Fries H.M., Alder K., Pauli H.C., 1978. Internal conversion coefficients for all atomic shells, At. Data Nucl. Data Tables 21, 91-289] and also includes new Dirac-Fock calculations [Band I.M. and Trzhaskovskaya M.B., 1993. Internal conversion coefficients for low-energy nuclear transitions, At. Data Nucl. Data Tables 55, 43-61]. This database is linked to a computer program to plot ICCs and their combinations (sums and ratios) as a function of Z and energy, as well as relative deviations of ICC or their combinations for any pair of tabulated data. Examples of these analyses are presented for the K-shell and total ICCs of the gamma-ray standards [Hansen H.H., 1985. Evaluation of K-shell and total internal conversion coefficients for some selected nuclear transitions, Eur. Appl. Res. Rept. Nucl. Sci. Tech. 11.6 (4) 777-816] and for the K-shell and total ICCs of high multipolarity transitions (total, K-, L-, M-shells of E3 and M3 and K-shell of M4). Experimental data sets are also compared with the theoretical values of these specific calculations

  20. Algebraic polynomials with random coefficients

    Directory of Open Access Journals (Sweden)

    K. Farahmand

    2002-01-01

    Full Text Available This paper provides an asymptotic value for the mathematical expected number of points of inflections of a random polynomial of the form a0(ω+a1(ω(n11/2x+a2(ω(n21/2x2+…an(ω(nn1/2xn when n is large. The coefficients {aj(w}j=0n, w∈Ω are assumed to be a sequence of independent normally distributed random variables with means zero and variance one, each defined on a fixed probability space (A,Ω,Pr. A special case of dependent coefficients is also studied.

  1. Extinction and reinstatement to cocaine-associated cues in male and female juvenile rats and the role of D1 dopamine receptor.

    Science.gov (United States)

    Brenhouse, Heather C; Thompson, Britta S; Sonntag, Kai C; Andersen, Susan L

    2015-08-01

    Extinction of behaviors in response to drug-associated cues and prevention of reinstatement are integral for addiction treatment, and can reverse or ameliorate the harmful consequences of drug use. The mechanisms controlling extinction and reinstatement involve prefrontal cortical dopamine receptors, which change in expression and activity during the juvenile and adolescent transitions until they mature in adulthood. Little is known about the role that PFC D1 dopamine receptors play in extinction of drug-paired associations early in life. We used extinction of place preferences for cocaine in juvenile male and female rats following genetic, cell-specific overexpression of D1 on glutamatergic cells in the PFC. All subjects needed to demonstrate cocaine preferences for inclusion in the extinction studies. Here, male juveniles with a preference to 10 mg/kg cocaine took longer to extinguish preferences compared to both male adults and female juveniles. Female juveniles extinguished more rapidly than male juveniles at 20 mg/kg cocaine. Overexpression of D1 in juvenile males significantly facilitated extinction relative to juvenile male controls, whereas D1 prolonged expression of extinction in adults overexpressing D1 and adolescents who naturally have elevated D1 expression. These data suggest that an immature D1 profile in juveniles prevented the learning of new associations, and D1 overexpression may provide sufficient activity to facilitate extinction learning. D1 overexpression reduced reinstatement to a priming dose of cocaine in juvenile males. Together, these data show D1 expression may re-program motivational circuitry to facilitate extinction learning during juvenility that is normally unavailable to juveniles and that sex differences exist. Copyright © 2015 Elsevier Ltd. All rights reserved.

  2. The Regulation of Cytokine Networks in Hippocampal CA1 Differentiates Extinction from Those Required for the Maintenance of Contextual Fear Memory after Recall

    Science.gov (United States)

    Scholz, Birger; Doidge, Amie N.; Barnes, Philip; Hall, Jeremy; Wilkinson, Lawrence S.; Thomas, Kerrie L.

    2016-01-01

    We investigated the distinctiveness of gene regulatory networks in CA1 associated with the extinction of contextual fear memory (CFM) after recall using Affymetrix GeneChip Rat Genome 230 2.0 Arrays. These data were compared to previously published retrieval and reconsolidation-attributed, and consolidation datasets. A stringent dual normalization and pareto-scaled orthogonal partial least-square discriminant multivariate analysis together with a jack-knifing-based cross-validation approach was used on all datasets to reduce false positives. Consolidation, retrieval and extinction were correlated with distinct patterns of gene expression 2 hours later. Extinction-related gene expression was most distinct from the profile accompanying consolidation. A highly specific feature was the discrete regulation of neuroimmunological gene expression associated with retrieval and extinction. Immunity–associated genes of the tyrosine kinase receptor TGFβ and PDGF, and TNF families’ characterized extinction. Cytokines and proinflammatory interleukins of the IL-1 and IL-6 families were enriched with the no-extinction retrieval condition. We used comparative genomics to predict transcription factor binding sites in proximal promoter regions of the retrieval-regulated genes. Retrieval that does not lead to extinction was associated with NF-κB-mediated gene expression. We confirmed differential NF-κBp65 expression, and activity in all of a representative sample of our candidate genes in the no-extinction condition. The differential regulation of cytokine networks after the acquisition and retrieval of CFM identifies the important contribution that neuroimmune signalling plays in normal hippocampal function. Further, targeting cytokine signalling upon retrieval offers a therapeutic strategy to promote extinction mechanisms in human disorders characterised by dysregulation of associative memory. PMID:27224427

  3. Extinction and reinstatement to cocaine-associated cues in male and female juvenile rats and the role of D1 dopamine receptor

    Science.gov (United States)

    Brenhouse, Heather C.; Thompson, Britta S.; Sonntag, Kai C.; Andersen, Susan L.

    2015-01-01

    Extinction of behaviors in response to drug-associated cues and prevention of reinstatement are integral for addiction treatment, and can reverse or ameliorate the harmful consequences of drug use. The mechanisms controlling extinction and reinstatement involve prefrontal cortical dopamine receptors, which change in expression and activity during the juvenile and adolescent transitions until they mature in adulthood. Little is known about the role that PFC D1 dopamine receptors play in extinction of drug-paired associations early in life. We used extinction of place preferences for cocaine in juvenile male and female rats following genetic, cell-specific overexpression of D1 on glutamatergic cells in the PFC. All subjects needed to demonstrate cocaine preferences for inclusion in the extinction studies. Here, male juveniles with a preference to 10 mg/kg cocaine took longer to extinguish preferences compared to both male adults and female juveniles. Female juveniles extinguished more rapidly than male juveniles at 20 mg/kg cocaine. Overexpression of D1 in juvenile males significantly facilitated extinction relative to juvenile male controls, whereas D1 prolonged expression of extinction in adults overexpressing D1 and adolescents who naturally have elevated D1 expression. These data suggest that an immature D1 profile in juveniles prevented the learning of new associations, and D1 overexpression may provide sufficient activity to facilitate extinction learning. D1 overexpression reduced reinstatement to a priming dose of cocaine in juvenile males. Together, these data show D1 expression may re-program motivational circuitry to facilitate extinction learning during juvenility that is normally unavailable to juveniles and that sex differences exist. PMID:25749358

  4. Featured Image: Extinction in Our Inner Galaxy

    Science.gov (United States)

    Kohler, Susanna

    2017-11-01

    In this map of the innermost galaxy, which spans only a few square degrees at the Milky Ways center, we can seethe locations of more than 31 million objects obtained from the VISTA Variables in the Va Lctea (VVV) survey. This near-infrared atlas traces stellar populations in the inner Milky Way that are dimmed and reddened by interstellar dust and gas a process known as extinction in a predictable way. Led by Javier Alonso-Garca (University of Antofagasta and the Millennium Institute of Astrophysics in Chile), a team of scientists has now used the VVV measurements of these stars to better understand the distribution of gas and dust that causes extinction in our inner galaxy particularly in the most central, highly reddened, and crowded areas of the Milky Way. For more information, check out the paper below.CitationJavier Alonso-Garca et al 2017 ApJL 849 L13. doi:10.3847/2041-8213/aa92c3

  5. Dinosaur extinction: closing the '3 m gap'.

    Science.gov (United States)

    Lyson, Tyler R; Bercovici, Antoine; Chester, Stephen G B; Sargis, Eric J; Pearson, Dean; Joyce, Walter G

    2011-12-23

    Modern debate regarding the extinction of non-avian dinosaurs was ignited by the publication of the Cretaceous-Tertiary (K-T) asteroid impact theory and has seen 30 years of dispute over the position of the stratigraphically youngest in situ dinosaur. A zone devoid of dinosaur fossils reported from the last 3 m of the Upper Cretaceous, coined the '3 m gap', has helped drive controversy. Here, we report the discovery of the stratigraphically youngest in situ dinosaur specimen: a ceratopsian brow horn found in a poorly rooted, silty, mudstone floodplain deposit located no more than 13 cm below the palynologically defined boundary. The K-T boundary is identified using three criteria: (i) decrease in Cretaceous palynomorphs without subsequent recovery, (ii) the existence of a 'fern spike', and (iii) correlation to a nearby stratigraphic section where primary extraterrestrial impact markers are present (e.g. iridium anomaly, spherules, shocked quartz). The in situ specimen demonstrates that a gap devoid of non-avian dinosaur fossils does not exist and is inconsistent with the hypothesis that non-avian dinosaurs were extinct prior to the K-T boundary impact event.

  6. [Light scattering extinction properties of atmospheric particle and pollution characteristics in hazy weather in Hangzhou].

    Science.gov (United States)

    Xu, Chang; Ye, Hui; Shen, Jian-Dong; Sun, Hong-Liang; Hong, Sheng-Mao; Jiao, Li; Huang, Kan

    2014-12-01

    In order to evaluate the influence of particle scattering on visibility, light scattering coefficient, particle concentrations and meteorological factor were simultaneously monitored from July 2011 to June 2012 in Hangzhou. Daily scattering coefficients ranged from 108.4 to 1 098.1 Mm(-1), with an annual average concentration of 428.6 Mm(-1) ± 200.2 Mm(-1). Seasonal variation of scattering coefficients was significant, with the highest concentrations observed in autumn and winter and the lowest in summer. It was found there were two peaks for the average diurnal variations of the scattering coefficient, which could be observed at 08:00 and 21:00. The scattering efficiencies of PM2.5 and PM10 were 7.6 m2 x g(-1) and 4.4 m2 x g(-1), respectively. The particle scattering was about 90.2 percent of the total light extinction. The scattering coefficients were 684.4 Mm(-1) ± 218.1 Mm(-1) and 1 095.4 Mm(-1) ± 397.7 Mm(-1) in hazy and heavy hazy days, respectively, which were 2.6 and 4.2 times as high as in non-hazy weather, indicating that particle scattering is the main factor for visibility degradation and the occurrence of hazy weather in Hangzhou.

  7. Polar measurements on profiles

    Energy Technology Data Exchange (ETDEWEB)

    Althaus, D.

    1985-03-01

    Wind tunnel models with a profile depth of t=0.5 m were measured in a laminar wind tunnel by the usual measuring processes. The profile resistance was determined by integration along the width of span. The smooth profiles were examined at Re=0.7/1.0 and 1.5 million. At Re=1.0 million, the position of the changeover points were determined with a stethoscope. Also at this Reynolds number measurements were taken with a trip wire of d=2 mm diameter, directly on the profile nose. The tables contain the co-ordinates of the profiles, the contours, the theoretical speed distributions for 4 different angles of attack, the csub(a)-csub(w) polar measurements and changeover points, and the torque coefficients around the t/4 point. (BR).

  8. Acute stress impairs the retrieval of extinction memory in humans

    Science.gov (United States)

    Raio, Candace M.; Brignoni-Perez, Edith; Goldman, Rachel; Phelps, Elizabeth A.

    2014-01-01

    Extinction training is a form of inhibitory learning that allows an organism to associate a previously aversive cue with a new, safe outcome. Extinction does not erase a fear association, but instead creates a competing association that may or may not be retrieved when a cue is subsequently encountered. Characterizing the conditions under which extinction learning is expressed is important to enhancing the treatment of anxiety disorders that rely on extinction-based exposure therapy as a primary treatment technique. The ventromedial prefrontal cortex, which plays an important role in the expression of extinction memory, has been shown to be functionally impaired after stress exposure. Further, recent research in rodents found that exposure to stress led to deficits in extinction retrieval, although this has yet to be tested in humans. To explore how stress might influence extinction retrieval in humans, participants underwent a differential aversive learning paradigm, in which one image was probabilistically paired with an aversive shock while the other image denoted safety. Extinction training directly followed, at which point reinforcement was omitted. A day later, participants returned to the lab and either completed an acute stress manipulation (i.e., cold pressor), or a control task, before undergoing an extinction retrieval test. Skin conductance responses and salivary cortisol concentrations were measured throughout each session as indices of fear arousal and neuroendocrine stress responses, respectively. The efficacy of our stress induction was established by observing significant increases in cortisol for the stress condition only. We examined extinction retrieval by comparing conditioned responses during the last trial of extinction (day 1) with that of the first trial of re-extinction (day 2). Groups did not differ on initial fear acquisition or extinction, however, one day later participants in the stress group (n = 27) demonstrated significantly less

  9. Irrational "Coefficients" in Renaissance Algebra.

    Science.gov (United States)

    Oaks, Jeffrey A

    2017-06-01

    Argument From the time of al-Khwārizmī in the ninth century to the beginning of the sixteenth century algebraists did not allow irrational numbers to serve as coefficients. To multiply by x, for instance, the result was expressed as the rhetorical equivalent of . The reason for this practice has to do with the premodern concept of a monomial. The coefficient, or "number," of a term was thought of as how many of that term are present, and not as the scalar multiple that we work with today. Then, in sixteenth-century Europe, a few algebraists began to allow for irrational coefficients in their notation. Christoff Rudolff (1525) was the first to admit them in special cases, and subsequently they appear more liberally in Cardano (1539), Scheubel (1550), Bombelli (1572), and others, though most algebraists continued to ban them. We survey this development by examining the texts that show irrational coefficients and those that argue against them. We show that the debate took place entirely in the conceptual context of premodern, "cossic" algebra, and persisted in the sixteenth century independent of the development of the new algebra of Viète, Decartes, and Fermat. This was a formal innovation violating prevailing concepts that we propose could only be introduced because of the growing autonomy of notation from rhetorical text.

  10. Integer Solutions of Binomial Coefficients

    Science.gov (United States)

    Gilbertson, Nicholas J.

    2016-01-01

    A good formula is like a good story, rich in description, powerful in communication, and eye-opening to readers. The formula presented in this article for determining the coefficients of the binomial expansion of (x + y)n is one such "good read." The beauty of this formula is in its simplicity--both describing a quantitative situation…

  11. A robust nonparametric method for quantifying undetected extinctions.

    Science.gov (United States)

    Chisholm, Ryan A; Giam, Xingli; Sadanandan, Keren R; Fung, Tak; Rheindt, Frank E

    2016-06-01

    How many species have gone extinct in modern times before being described by science? To answer this question, and thereby get a full assessment of humanity's impact on biodiversity, statistical methods that quantify undetected extinctions are required. Such methods have been developed recently, but they are limited by their reliance on parametric assumptions; specifically, they assume the pools of extant and undetected species decay exponentially, whereas real detection rates vary temporally with survey effort and real extinction rates vary with the waxing and waning of threatening processes. We devised a new, nonparametric method for estimating undetected extinctions. As inputs, the method requires only the first and last date at which each species in an ensemble was recorded. As outputs, the method provides estimates of the proportion of species that have gone extinct, detected, or undetected and, in the special case where the number of undetected extant species in the present day is assumed close to zero, of the absolute number of undetected extinct species. The main assumption of the method is that the per-species extinction rate is independent of whether a species has been detected or not. We applied the method to the resident native bird fauna of Singapore. Of 195 recorded species, 58 (29.7%) have gone extinct in the last 200 years. Our method projected that an additional 9.6 species (95% CI 3.4, 19.8) have gone extinct without first being recorded, implying a true extinction rate of 33.0% (95% CI 31.0%, 36.2%). We provide R code for implementing our method. Because our method does not depend on strong assumptions, we expect it to be broadly useful for quantifying undetected extinctions. © 2016 Society for Conservation Biology.

  12. Climate change, elevational range shifts, and bird extinctions.

    Science.gov (United States)

    Sekercioglu, Cagan H; Schneider, Stephen H; Fay, John P; Loarie, Scott R

    2008-02-01

    Limitations imposed on species ranges by the climatic, ecological, and physiological effects of elevation are important determinants of extinction risk. We modeled the effects of elevational limits on the extinction risk of landbirds, 87% of all bird species. Elevational limitation of range size explained 97% of the variation in the probability of being in a World Conservation Union category of extinction risk. Our model that combined elevational ranges, four Millennium Assessment habitat-loss scenarios, and an intermediate estimate of surface warming of 2.8 degrees C, projected a best guess of 400-550 landbird extinctions, and that approximately 2150 additional species would be at risk of extinction by 2100. For Western Hemisphere landbirds, intermediate extinction estimates based on climate-induced changes in actual distributions ranged from 1.3% (1.1 degrees C warming) to 30.0% (6.4 degrees C warming) of these species. Worldwide, every degree of warming projected a nonlinear increase in bird extinctions of about 100-500 species. Only 21% of the species predicted to become extinct in our scenarios are currently considered threatened with extinction. Different habitat-loss and surface-warming scenarios predicted substantially different futures for landbird species. To improve the precision of climate-induced extinction estimates, there is an urgent need for high-resolution measurements of shifts in the elevational ranges of species. Given the accelerating influence of climate change on species distributions and conservation, using elevational limits in a tested, standardized, and robust manner can improve conservation assessments of terrestrial species and will help identify species that are most vulnerable to global climate change. Our climate-induced extinction estimates are broadly similar to those of bird species at risk from other factors, but these estimates largely involve different sets of species.

  13. 3,4-Methylenedioxymethamphetamine facilitates fear extinction learning.

    Science.gov (United States)

    Young, M B; Andero, R; Ressler, K J; Howell, L L

    2015-09-15

    Acutely administered 3,4-methylenedioxymethamphetamine (MDMA, 'ecstasy') has been proposed to have long-term positive effects on post-traumatic stress disorder (PTSD) symptoms when combined with psychotherapy. No preclinical data support a mechanistic basis for these claims. Given the persistent nature of psychotherapeutic gains facilitated by MDMA, we hypothesized that MDMA improves fear extinction learning, a key process in exposure-based therapies for PTSD. In these experiments, mice were first exposed to cued fear conditioning and treated with drug vehicle or MDMA before extinction training 2 days later. MDMA was administered systemically and also directly targeted to brain structures known to contribute to extinction. In addition to behavioral measures of extinction, changes in mRNA levels of brain-derived neurotrophic factor (Bdnf) and Fos were measured after MDMA treatment and extinction. MDMA (7.8 mg kg(-1)) persistently and robustly enhanced long-term extinction when administered before extinction training. MDMA increased the expression of Fos in the amygdala and medial prefrontal cortex (mPFC), whereas increases in Bdnf expression were observed only in the amygdala after extinction training. Extinction enhancements were recapitulated when MDMA (1 μg) was infused directly into the basolateral complex of the amygdala (BLA), and enhancement was abolished when BDNF signaling was inhibited before extinction. These findings suggest that MDMA enhances fear memory extinction through a BDNF-dependent mechanism, and that MDMA may be a useful adjunct to exposure-based therapies for PTSD and other anxiety disorders characterized by altered fear learning.

  14. Deepened Extinction following Compound Stimulus Presentation: Noradrenergic Modulation

    Science.gov (United States)

    Janak, Patricia H.; Corbit, Laura H.

    2011-01-01

    Behavioral extinction is an active form of new learning involving the prediction of nonreward where reward has previously been present. The expression of extinction learning can be disrupted by the presentation of reward itself or reward-predictive stimuli (reinstatement) as well as the passage of time (spontaneous recovery) or contextual changes…

  15. Asymptotic behaviour near extinction of continuous-state branching processes

    OpenAIRE

    Berzunza, Gabriel; Pardo, Juan Carlos

    2016-01-01

    In this note, we study the asymptotic behaviour near extinction of (sub-) critical continuous state branching processes. In particular, we establish an analogue of Khintchin's law of the iterated logarithm near extinction time for a continuous state branching process whose branching mechanism satisfies a given condition and its reflected process at its infimum.

  16. DUST EXTINCTION IN NGC-4594, THE SOMBRERO GALAXY

    NARCIS (Netherlands)

    KNAPEN, JH; HES, R; BECKMAN, JE; PELETIER, RF

    We have studied the extinction law in the well-defined dust lane of the Sombrero galaxy, NGC4594. In the R,I,J,H, and K bands we find good agreement between values for the extinction ratios A-lambda/A(v) in NGC4594 and those reported for our own Galaxy. We can explain the apparently somewhat lower

  17. Ultraviolet extinction in M-supergiant circumstellar envelopes

    International Nuclear Information System (INIS)

    Buss, R.H. Jr.; Snow, T.P. Jr.

    1986-01-01

    Using International Ultraviolet (IUS) archival low-dispersion spectra, ultraviolet spectral extinctions were derived for the circumstellar envelopes of two M supergiants: HD 60414 and HD 213310. The observed stellar systems belong to a class of widely-separated spectroscopic binaries that are called VV Cephei stars. The total extinction was calculated by dividing the reddened fluxes with unreddened comparison fluxes of similar stars (g B2.5 for HD 213310 and a normalized s+B3 for HD 60414) from the reference atlas. After substracting the interstellar extinctions, which were estimated from the E(B-V) reddening of nearby stars, the resultant circumstellar extinctions were normalized at about 3.5 inverse microns. Not only is the 2175 A extinction bump absent in the circumstellar extinctions, but the far-ultraviolet extinction rise is also absent. The rather flat, ultraviolet extinction curves were interpreted as signatures of a population of noncarbonaceous, oxygen-rich grains with diameters larger than the longest observed wavelength

  18. POST-RETRIEVAL EXTINCTION ATTENUATES ALCOHOL CUE REACTIVITY IN RATS

    Science.gov (United States)

    Cofresí, Roberto U.; Lewis, Suzanne M.; Chaudhri, Nadia; Lee, Hongjoo J.; Monfils, Marie-H.; Gonzales, Rueben A.

    2017-01-01

    BACKGROUND Conditioned responses to alcohol-associated cues can hinder recovery from alcohol use disorder (AUD). Cue exposure (extinction) therapy (CET) can reduce reactivity to alcohol cues, but its efficacy is limited by phenomena such as spontaneous recovery and reinstatement that can cause a return of conditioned responding after extinction. Using a preclinical model of alcohol cue reactivity in rats, we evaluated whether the efficacy of alcohol CET could be improved by conducting CET during the memory reconsolidation window after retrieval of a cue-alcohol association. METHODS Rats were provided with intermittent access to unsweetened alcohol. Rats were then trained to predict alcohol access based on a visual cue. Next, rats were treated with either standard extinction (n=14) or post-retrieval extinction (n=13). Rats were then tested for long-term memory of extinction and susceptibility to spontaneous recovery and reinstatement. RESULTS Despite equivalent extinction, rats treated with post-retrieval extinction exhibited reduced spontaneous recovery and reinstatement relative to rats treated with standard extinction. CONCLUSIONS Post-retrieval CET shows promise for persistently attenuating the risk to relapse posed by alcohol cues in individuals with AUD. PMID:28169439

  19. d-Cycloserine reduces context specificity of sexual extinction learning

    NARCIS (Netherlands)

    Brom, Mirte; Laan, Ellen; Everaerd, Walter; Spinhoven, Philip; Trimbos, Baptist; Both, Stephanie

    2015-01-01

    d-Cycloserine (DCS) enhances extinction processes in animals. Although classical conditioning is hypothesized to play a pivotal role in the aetiology of appetitive motivation problems, no research has been conducted on the effect of DCS on the reduction of context specificity of extinction in human

  20. About one of possible cosmic causes of extinction of organisms

    International Nuclear Information System (INIS)

    Kagramanov, Yu.R.

    2004-01-01

    Based on the analysis of diverse causes of extinction of organisms in the history of the Earth and a new hypothesis of cosmic origin of oil, a suggested new possible cause of such extinction is related to intoxication with hydrocarbons arriving from the outer space

  1. Relating plant height to demographic rates and extinction vulnerability

    NARCIS (Netherlands)

    Jonge, de Melinda M.J.; Hilbers, Jelle P.; Jongejans, Eelke; Ozinga, Wim A.; Hendriks, A.J.; Huijbregts, Mark A.J.

    2018-01-01

    To prioritize conservation efforts, it is important to know which plant species are most vulnerable to extinction. Intrinsic extinction vulnerabilities depend on demographic parameters, but for many species these demographic parameters are lacking. Body size has been successfully used as proxy of

  2. Adaptive Dynamics, Control, and Extinction in Networked Populations

    Science.gov (United States)

    2015-07-09

    network geometries. From the pre-history of paths that go extinct, a density function is created from the prehistory of these paths, and a clear local...density plots of Fig. 3b. Using the IAMM to compute the most probable path and comparing it to the prehistory of extinction events on stochastic networks

  3. A comprehensive genomic history of extinct and living elephants

    DEFF Research Database (Denmark)

    Palkopoulou, Eleftheria; Lipson, Mark; Mallick, Swapan

    2018-01-01

    Elephantids are the world's most iconic megafaunal family, yet there is no comprehensive genomic assessment of their relationships. We report a total of 14 genomes, including 2 from the American mastodon, which is an extinct elephantid relative, and 12 spanning all three extant and three extinct...

  4. Late Pleistocene and Holocene mammal extinctions on continental Africa

    Science.gov (United States)

    Faith, J. Tyler

    2014-01-01

    Understanding the cause of late Quaternary mammal extinctions is the subject of intense debate spanning the fields of archeology and paleontology. In the global context, the losses on continental Africa have received little attention and are poorly understood. This study aims to inspire new discussion of African extinctions through a review of the extinct species and the chronology and possible causes of those extinctions. There are at least 24 large mammal (> 5 kg) species known to have disappeared from continental Africa during the late Pleistocene or Holocene, indicating a much greater taxonomic breadth than previously recognized. Among the better sampled taxa, these losses are restricted to the terminal Pleistocene and early Holocene, between 13,000 and 6000 yrs ago. The African extinctions preferentially affected species that are grazers or prefer grasslands. Where good terrestrial paleoenvironmental records are present, extinctions are associated with changes in the availability, productivity, or structure of grassland habitats, suggesting that environmental changes played a decisive role in the losses. In the broader evolutionary context, these extinctions represent recent examples of selective taxonomic winnowing characterized by the loss of grassland specialists and the establishment of large mammal communities composed of more ecologically flexible taxa over the last million years. There is little reason to believe that humans played an important role in African extinctions.

  5. Direct measurement of interstellar extinction toward young stars using atomic hydrogen Lyα absorption

    Energy Technology Data Exchange (ETDEWEB)

    McJunkin, Matthew; France, Kevin; Brown, Alexander [Center for Astrophysics and Space Astronomy, University of Colorado, 389 UCB, Boulder, CO 80309 (United States); Schneider, P. C. [Hamburger Sternwarte, Gojenbergsweg 112, D-21029 Hamburg (Germany); Herczeg, Gregory J. [Kavli Institute for Astronomy and Astrophysics, Peking University, Beijing 100871 (China); Hillenbrand, Lynne [California Institute of Technology, Department of Astrophysics, MC105-24, 1200 E. California Blvd., Pasadena, CA 91125 (United States); Schindhelm, Eric [Southwest Research Institute, 1050 Walnut Street, Suite 300, Boulder, CO 80302 (United States); Edwards, Suzan, E-mail: matthew.mcjunkin@colorado.edu [Five College Astronomy Department, Smith College, Northampton, MA 01063 (United States)

    2014-01-10

    Interstellar reddening corrections are necessary to reconstruct the intrinsic spectral energy distributions (SEDs) of accreting protostellar systems. The stellar SED determines the heating and chemical processes that can occur in circumstellar disks. Measurement of neutral hydrogen absorption against broad Lyα emission profiles in young stars can be used to obtain the total H I column density (N(H I)) along the line of sight. We measure N(H I) with new and archival ultraviolet observations from the Hubble Space Telescope (HST) of 31 classical T Tauri and Herbig Ae/Be stars. The H I column densities range from log{sub 10}(N(H I)) ≈19.6-21.1, with corresponding visual extinctions of A{sub V} =0.02-0.72 mag, assuming an R{sub V} of 3.1. We find that the majority of the H I absorption along the line of sight likely comes from interstellar rather than circumstellar material. Extinctions derived from new HST blue-optical spectral analyses, previous IR and optical measurements, and new X-ray column densities on average overestimate the interstellar extinction toward young stars compared to the N(H I) values by ∼0.6 mag. We discuss possible explanations for this discrepancy in the context of a protoplanetary disk geometry.

  6. Experimental Measurement of Diffusive Extinction Depth and Soil Moisture Gradients in Southwestern Saudi Arabian Dune Sand

    KAUST Repository

    Mughal, Iqra

    2013-05-01

    In arid lands, a major contribution to water loss is by soil water evaporation. Desert sand dunes in arid regions are devoid of runoff and have high rates of infiltration. Rainwater is commonly stored within them because of the low permeability soils in the underlying desert pavement. In such cases, moisture is confined in the sand dune below a depth, termed as the “extinction depth”, where it is protected from evaporation during long dry periods. Moreover, desert sand dunes have sparse vegetation, which results in low transpiration losses from the stored water. The water accumulated below the extinction depth of the sand dunes can be utilized for various purposes such as in irrigation to support desert agriculture. In this study, field experiments were conducted in Western Saudi Arabia to monitor the soil moisture gradients and determine the diffusive extinction depth of dune sand. The dune sand was saturated with water and was exposed to natural conditions (evaporation and precipitation). The decline of the water level in the sand column was continuously recorded using transducers and sensors installed at different depths monitored the temporal variation of temperature and moisture content within the sand. The hydrological simulator HYDRUS-1D was used to construct the vertical profiles of soil water content and temperature and the results obtained from HYDRUS-1D were compared to the gradients monitored by the sensors.

  7. Phase function, backscatter, extinction, and absorption for standard radiation atmosphere and El Chichon aerosol models at visible and near-infrared wavelengths

    Science.gov (United States)

    Whitlock, C. H.; Suttles, J. T.; Lecroy, S. R.

    1985-01-01

    Tabular values of phase function, Legendre polynominal coefficients, 180 deg backscatter, and extinction cross section are given for eight wavelengths in the atmospheric windows between 0.4 and 2.2 microns. Also included are single scattering albedo, asymmetry factor, and refractive indices. These values are based on Mie theory calculations for the standard rediation atmospheres (continental, maritime, urban, unperturbed stratospheric, volcanic, upper atmospheric, soot, oceanic, dust, and water-soluble) assest measured volcanic aerosols at several time intervals following the El Chichon eruption. Comparisons of extinction to 180 deg backscatter for different aerosol models are presented and related to lidar data.

  8. Adrenalectomy eliminates the extinction spike in autoshaping with rats.

    Science.gov (United States)

    Thomas, B L; Papini, M R

    2001-03-01

    Experiment 1, using rats, investigated the effect of adrenalectomy (ADX) on the invigoration of lever-contact performance that occurs in the autoshaping situation after a shift from acquisition to extinction (called the extinction spike). Groups of rats with ADX or sham operations were trained under spaced and massed conditions [average intertrial intervals (ITI) of either 15 or 90 s] for 10 sessions and then shifted to extinction. ADX did not affect acquisition training but it eliminated the extinction spike. Plasma corticosterone levels during acquisition were shown in Experiment 2 to be similar in rats trained under spaced or massed conditions. Adrenal participation in the emotional arousal induced by conditions of surprising nonreward (e.g., extinction) is discussed.

  9. How to detect and visualize extinction thresholds for structured PVA models

    NARCIS (Netherlands)

    Hildenbrandt, H.; Grimm, V.

    2006-01-01

    An extinction threshold is a population size below which extinction risk increases to beyond critical values. However, detecting extinction thresholds for structured population models is not straightforward because many different population structures may correspond to the same population size.

  10. Unpaired shocks during extinction weaken the contextual renewal of a conditioned discrimination

    NARCIS (Netherlands)

    Vervliet, B.; Vansteenwegen, D.; Hermans, D.

    2010-01-01

    Extinction is generally more fragile than conditioning, as illustrated by the contextual renewal effect. The traditional extinction procedure entails isolated presentations of the conditioned stimulus. Extinction may be boosted by adding isolated presentations of the unconditioned stimulus, as this

  11. Demography and the extinction of European Neanderthals

    DEFF Research Database (Denmark)

    Sørensen, Bent

    2011-01-01

    Causes previously suggested for the sudden extinction of Neanderthals (Homo neanderthalensis) in Europe, starting around 35,000 years ago, comprise food shortage, climatic effects and violence from Modern Humans. The aim here is to formulate a demographic model with reconstructed fertility and de...... uncertainty. Finally, the option of regional migration between northern, middle and southern Europe is added, in order to capture population movements away from a region in response to deteriorating or improving climate. This model accounts for population developments, including the re......-population of the Middle and Northern regions of Europe during and after the warm Eem period. However, parameter choices that give plausible results during the initial 210,000 years also predict that the Neanderthals should have survived the latter part of the Weichselian ice age, despite competing for food with Modern...

  12. Promotion of cooperation by selective group extinction

    Science.gov (United States)

    Böttcher, Marvin A.; Nagler, Jan

    2016-06-01

    Multilevel selection is an important organizing principle that crucially underlies evolutionary processes from the emergence of cells to eusociality and the economics of nations. Previous studies on multilevel selection assumed that the effective higher-level selection emerges from lower-level reproduction. This leads to selection among groups, although only individuals reproduce. We introduce selective group extinction, where groups die with a probability inversely proportional to their group fitness. When accounting for this the critical benefit-to-cost ratio is substantially lowered. Because in game theory and evolutionary dynamics the degree of cooperation crucially depends on this ratio above which cooperation emerges, previous studies may have substantially underestimated the establishment and maintenance of cooperation.

  13. Partially linear varying coefficient models stratified by a functional covariate

    KAUST Repository

    Maity, Arnab

    2012-10-01

    We consider the problem of estimation in semiparametric varying coefficient models where the covariate modifying the varying coefficients is functional and is modeled nonparametrically. We develop a kernel-based estimator of the nonparametric component and a profiling estimator of the parametric component of the model and derive their asymptotic properties. Specifically, we show the consistency of the nonparametric functional estimates and derive the asymptotic expansion of the estimates of the parametric component. We illustrate the performance of our methodology using a simulation study and a real data application.

  14. Local carbon diffusion coefficient measurement in the S-1 spheromak

    International Nuclear Information System (INIS)

    Mayo, R.M.; Levinton, F.M.; Meyerhofer, D.D.; Chu, T.K.; Paul, S.F.; Yamada, M.

    1988-10-01

    The local carbon diffusion coefficient was measured in the S - 1 spheromak by detecting the radial spread of injected carbon impurity. The radial impurity density profile is determined by the balance of ionization and diffusion. Using measured local electron temperature T/sub e/ and density n/sub e/, the ionization rate is determined from which the particle diffusion coefficient is inferred. The results found in this work are consistent with Bohm diffusion. The absolute magnitude of D/sub /perpendicular// was determined to be (4/approximately/6) /times/ D/sub Bohm/. 25 refs., 13 figs., 2 tabs

  15. Is chytridiomycosis driving Darwin's frogs to extinction?

    Directory of Open Access Journals (Sweden)

    Claudio Soto-Azat

    Full Text Available Darwin's frogs (Rhinoderma darwinii and R. rufum are two species of mouth brooding frogs from Chile and Argentina that have experienced marked population declines. Rhinoderma rufum has not been found in the wild since 1980. We investigated historical and current evidence of Batrachochytrium dendrobatidis (Bd infection in Rhinoderma spp. to determine whether chytridiomycosis is implicated in the population declines of these species. Archived and live specimens of Rhinoderma spp., sympatric amphibians and amphibians at sites where Rhinoderma sp. had recently gone extinct were examined for Bd infection using quantitative real-time PCR. Six (0.9% of 662 archived anurans tested positive for Bd (4/289 R. darwinii; 1/266 R. rufum and 1/107 other anurans, all of which had been collected between 1970 and 1978. An overall Bd-infection prevalence of 12.5% was obtained from 797 swabs taken from 369 extant individuals of R. darwinii and 428 individuals representing 18 other species of anurans found at sites with current and recent presence of the two Rhinoderma species. In extant R. darwinii, Bd-infection prevalence (1.9% was significantly lower than that found in other anurans (7.3%. The prevalence of infection (30% in other amphibian species was significantly higher in sites where either Rhinoderma spp. had become extinct or was experiencing severe population declines than in sites where there had been no apparent decline (3.0%; x(2 = 106.407, P<0.001. This is the first report of widespread Bd presence in Chile and our results are consistent with Rhinoderma spp. declines being due to Bd infection, although additional field and laboratory investigations are required to investigate this further.

  16. High frequency of functional extinctions in ecological networks.

    Science.gov (United States)

    Säterberg, Torbjörn; Sellman, Stefan; Ebenman, Bo

    2013-07-25

    Intensified exploitation of natural populations and habitats has led to increased mortality rates and decreased abundances of many species. There is a growing concern that this might cause critical abundance thresholds of species to be crossed, with extinction cascades and state shifts in ecosystems as a consequence. When increased mortality rate and decreased abundance of a given species lead to extinction of other species, this species can be characterized as functionally extinct even though it still exists. Although such functional extinctions have been observed in some ecosystems, their frequency is largely unknown. Here we use a new modelling approach to explore the frequency and pattern of functional extinctions in ecological networks. Specifically, we analytically derive critical abundance thresholds of species by increasing their mortality rates until an extinction occurs in the network. Applying this approach on natural and theoretical food webs, we show that the species most likely to go extinct first is not the one whose mortality rate is increased but instead another species. Indeed, up to 80% of all first extinctions are of another species, suggesting that a species' ecological functionality is often lost before its own existence is threatened. Furthermore, we find that large-bodied species at the top of the food chains can only be exposed to small increases in mortality rate and small decreases in abundance before going functionally extinct compared to small-bodied species lower in the food chains. These results illustrate the potential importance of functional extinctions in ecological networks and lend strong support to arguments advocating a more community-oriented approach in conservation biology, with target levels for populations based on ecological functionality rather than on mere persistence.

  17. Calibration factor or calibration coefficient?

    International Nuclear Information System (INIS)

    Meghzifene, A.; Shortt, K.R.

    2002-01-01

    Full text: The IAEA/WHO network of SSDLs was set up in order to establish links between SSDL members and the international measurement system. At the end of 2001, there were 73 network members in 63 Member States. The SSDL network members provide calibration services to end-users at the national or regional level. The results of the calibrations are summarized in a document called calibration report or calibration certificate. The IAEA has been using the term calibration certificate and will continue using the same terminology. The most important information in a calibration certificate is a list of calibration factors and their related uncertainties that apply to the calibrated instrument for the well-defined irradiation and ambient conditions. The IAEA has recently decided to change the term calibration factor to calibration coefficient, to be fully in line with ISO [ISO 31-0], which recommends the use of the term coefficient when it links two quantities A and B (equation 1) that have different dimensions. The term factor should only be used for k when it is used to link the terms A and B that have the same dimensions A=k.B. However, in a typical calibration, an ion chamber is calibrated in terms of a physical quantity such as air kerma, dose to water, ambient dose equivalent, etc. If the chamber is calibrated together with its electrometer, then the calibration refers to the physical quantity to be measured per electrometer unit reading. In this case, the terms referred have different dimensions. The adoption by the Agency of the term coefficient to express the results of calibrations is consistent with the 'International vocabulary of basic and general terms in metrology' prepared jointly by the BIPM, IEC, ISO, OIML and other organizations. The BIPM has changed from factor to coefficient. The authors believe that this is more than just a matter of semantics and recommend that the SSDL network members adopt this change in terminology. (author)

  18. Biometrical studies upon hominoid teeth: the coefficient of variation, sexual dimorphism and questions of phylogenetic relationship.

    Science.gov (United States)

    Blumenberg, B

    1985-01-01

    Sexual dimorphism as a function of variation in hominoid tooth metrics has been investigated for four groups of taxa: Recent great apes (two subfamilies), Dryopiths (one subfamily), Ramapiths (one subfamily) and hominids (one family). Gorilla, and to a lesser extent Pan, appear characterized by very high levels of sexual dimorphism and meet several criteria for statistical outliers. Recent great apes are the only group exhibiting consistently high levels of sexual dimorphism. Ramapiths are the only group characterized by low levels of sexual dimorphism and their relative canine length is most similar to Dryopiths. Both Dryopiths and hominids contain taxa with low and intermediate levels of sexual dimorphism. The Gingerich and Shoeninger hypothesis relating coefficients of variation to occlusal complexity is supported. Non-parametric statistics suggest that homogeneity of coefficient of variation profiles over most of the tooth row is characteristic of only the Dryopiths and a composite data set composed of the Dryopith plus Ramapith tooth measurements. Oxnard's model for the multifactorial basis of multiple sexual dimorphisms is also supported. The Dryopith and hominid patterns of sexual dimorphism are similar, an observation that suggests phylogenetic relationship. At the taxonomic level of subfamily or family, sexual dimorphism is a character of cladistic usefulness and possible phylogenetic valence. Assuming that breeding system and sexual dimorphism are functional correlates as many workers suggest, then Ramapithecus sp. China, Sivapithecus indicus and possibly Australopithecus boisei are good candidates for having possessed monogamous breeding/social structures. All Dryopith taxa, S. sivalensis, Sivapithecus sp. China, A. afarensis, Homo habilis and H. erectus emerge as the best candidates for having possessed a polygynous breeding/social structure. No biometrical affinities of Ramapiths with hominids can be demonstrated and some phylogenetic relationship with

  19. Trajectories of Late Permian – Jurassic radiolarian extinction rates: no evidence for an end-Triassic mass extinction

    Directory of Open Access Journals (Sweden)

    W. Kiessling

    2011-02-01

    Full Text Available The hypothesis that ocean acidification was a proximate trigger of the marine end-Triassic mass extinction rests on the assumption that taxa that strongly invest in the secretion of calcium-carbonate skeletons were significantly more affected by the crisis than other taxa. An argument against this hypothesis is the great extinction toll of radiolarians that has been reported from work on local sections. Radiolarians have siliceous tests and thus should be less affected by ocean acidification. We compiled taxonomically vetted occurrences of late Permian and Mesozoic radiolarians and analyzed extinction dynamics of radiolarian genera. Although extinction rates were high at the end of the Triassic, there is no evidence for a mass extinction in radiolarians but rather significantly higher background extinction in the Triassic than in the Jurassic. Although the causes for this decline in background extinction levels remain unclear, the lack of a major evolutionary response to the end-Triassic event, gives support for the hypothesis that ocean acidification was involved in the dramatic extinctions of many calcifying taxa. doi:10.1002/mmng.201000017

  20. Approach to simultaneously denoise and invert backscatter and extinction from photon-limited atmospheric lidar observations.

    Science.gov (United States)

    Marais, Willem J; Holz, Robert E; Hu, Yu Hen; Kuehn, Ralph E; Eloranta, Edwin E; Willett, Rebecca M

    2016-10-10

    Atmospheric lidar observations provide a unique capability to directly observe the vertical column of cloud and aerosol scattering properties. Detector and solar-background noise, however, hinder the ability of lidar systems to provide reliable backscatter and extinction cross-section estimates. Standard methods for solving this inverse problem are most effective with high signal-to-noise ratio observations that are only available at low resolution in uniform scenes. This paper describes a novel method for solving the inverse problem with high-resolution, lower signal-to-noise ratio observations that are effective in non-uniform scenes. The novelty is twofold. First, the inferences of the backscatter and extinction are applied to images, whereas current lidar algorithms only use the information content of single profiles. Hence, the latent spatial and temporal information in noisy images are utilized to infer the cross-sections. Second, the noise associated with photon-counting lidar observations can be modeled using a Poisson distribution, and state-of-the-art tools for solving Poisson inverse problems are adapted to the atmospheric lidar problem. It is demonstrated through photon-counting high spectral resolution lidar (HSRL) simulations that the proposed algorithm yields inverted backscatter and extinction cross-sections (per unit volume) with smaller mean squared error values at higher spatial and temporal resolutions, compared to the standard approach. Two case studies of real experimental data are also provided where the proposed algorithm is applied on HSRL observations and the inverted backscatter and extinction cross-sections are compared against the standard approach.

  1. Accelerated modern human?induced species losses: Entering the sixth mass extinction

    OpenAIRE

    Ceballos, Gerardo; Ehrlich, Paul R.; Barnosky, Anthony D.; Garc?a, Andr?s; Pringle, Robert M.; Palmer, Todd M.

    2015-01-01

    The oft-repeated claim that Earth?s biota is entering a sixth ?mass extinction? depends on clearly demonstrating that current extinction rates are far above the ?background? rates prevailing between the five previous mass extinctions. Earlier estimates of extinction rates have been criticized for using assumptions that might overestimate the severity of the extinction crisis. We assess, using extremely conservative assumptions, whether human activities are causing a mass extinction. First, we...

  2. Nature and Causes of the Immediate Extinction Deficit: A Brief Review

    OpenAIRE

    Maren, Stephen

    2013-01-01

    Recent data in both rodents and humans suggests that the timing of extinction trials after conditioning influences the magnitude and duration of extinction. For example, administering extinction trials soon after Pavlovian fear conditioning in rats, mice, and humans results in minimal fear suppression--the so-called immediate extinction deficit. Here I review recent work examining the behavioral and neural substrates of the immediate extinction deficit. I suggest that extinction is most effec...

  3. Form of multicomponent Fickian diffusion coefficients matrix

    International Nuclear Information System (INIS)

    Wambui Mutoru, J.; Firoozabadi, Abbas

    2011-01-01

    Highlights: → Irreversible thermodynamics establishes form of multicomponent diffusion coefficients. → Phenomenological coefficients and thermodynamic factors affect sign of diffusion coefficients. → Negative diagonal elements of diffusion coefficients matrix can occur in non-ideal mixtures. → Eigenvalues of the matrix of Fickian diffusion coefficients may not be all real. - Abstract: The form of multicomponent Fickian diffusion coefficients matrix in thermodynamically stable mixtures is established based on the form of phenomenological coefficients and thermodynamic factors. While phenomenological coefficients form a symmetric positive definite matrix, the determinant of thermodynamic factors matrix is positive. As a result, the Fickian diffusion coefficients matrix has a positive determinant, but its elements - including diagonal elements - can be negative. Comprehensive survey of reported diffusion coefficients data for ternary and quaternary mixtures, confirms that invariably the determinant of the Fickian diffusion coefficients matrix is positive.

  4. Can we avoid the Sixth Mass Extinction? Setting today's extinction crisis in the context of the Big Five

    Science.gov (United States)

    Barnosky, A. D.

    2012-12-01

    While the ultimate extinction driver now—Homo sapiens—is unique with respect to the drivers of past extinctions, comparison of parallel neontological and paleontological information helps calibrate how far the so-called Sixth Mass Extinction has progressed and whether it is inevitable. Such comparisons document that rates of extinction today are approaching or exceeding those that characterized the Big Five Mass Extinctions. Continuation of present extinction rates for vertebrates, for example, would result in 75% species loss—the minimum benchmark exhibited in the Big Five extinctions—within 3 to 22 centuries, assuming constant rates of loss and no threshold effects. Preceding and during each of the Big Five, the global ecosystem experienced major changes in climate, atmospheric chemisty, and ocean chemistry—not unlike what is being observed presently. Nevertheless, only 1-2% of well-assessed modern species have been lost over the past five centuries, still far below what characterized past mass extinctions in the strict paleontological sense. For mammals, adding in the end-Pleistocene species that died out would increase the species-loss percentage by some 5%. If threatened vertebrate species were to actually go extinct, losses would rise to between 14 and 40%, depending on the group. Such observations highlight that, although many species have already had their populations drastically reduced to near-critical levels, the Sixth Mass Extinction has not yet progressed to the point where it is unavoidable. Put another way, the vast majority of species that have occupied the world in concert with Homo sapiens are still alive and are possible to save. That task, however, will require slowing the abnormally high extinction rates that are now in progress, which in turn requires unified efforts to cap human population growth, decrease the average human footprint, reduce fossil fuel use while simultaneously increasing clean energy technologies, integrate

  5. Tying Extinction Events to Comet Impacts Large Enough to Cause an Extinction in Themselves.

    Science.gov (United States)

    Burgener, J. A.

    2017-12-01

    Comets over 35 km in size impacting Earth will create vast fireballs, and will boil large parts of the oceans, causing extinction events in themselves. They will likely provide enough energy to shatter the crust and eject large masses of molten rock from the mantle, forming traps. Traps are clearly associated with extinction events, but are not expected to cause extinctions. While Chicxulub is recognized to have occurred at the time of the K/Pg boundary layer, it is recognized as being too small in itself to cause an extinction. Are large comet impacts likely? The Kuiper belt has more than 100,000 objects over 100 km in diameter and millions over 10 km. Typically their orbits are less stable than asteroid orbits due to large bodies such as Pluto moving through the belt. The asteroid belt has only 10,000 objects over 10 km diameter. Comet impacts should be more common than asteroid impacts, yet none of the recognized craters are expected to be due to comets. There are many features on Earth that are poorly explained by Plate Tectonics that would be well explained if they were considered to be comet impact craters. A consideration of the Black Sea and the Tarim Basin will show that impact interpretations are a better fit than the present Plate Tectonics' explanations. Both basins are in the midst of mountain building from plate collisions, but are themselves not being disturbed by the plate collisions. Both are ellipses angled at 23.4 degrees to the equator, matching the angle expected for a low angle impact from a comet traveling in the ecliptic. Both are too deep at 15 km depths to be standard oceans (typically 5 km deep). Both are filled with horizontal layers of sediments, undisturbed by the mountain building occurring at the edges. Both have thin crusts and high Moho boundaries. Both have thin lithosphere. Yet both show GPS movement of the land around them moving away from them, as though they were much thicker and stronger than the surrounding land. The Tarim

  6. Size distribution of interstellar particles. III. Peculiar extinctions and normal infrared extinction

    International Nuclear Information System (INIS)

    Mathis, J.S.; Wallenhorst, S.G.

    1981-01-01

    The effect of changing the upper and lower size limits of a distribution of bare graphite and silicate particles with n(a)αa/sup -q/ is investigated. Mathis, Rumpl, and Nordsieck showed that the normal extinction is matched very well by having the small-size cutoff, a/sub -/, roughly-equal0.005 or 0.01 μm, and the large size a/sub +/, about 0.25 μm, and q = 3.5 for both substances. We consider the progressively peculiar extinctions exhibited by the well-observed stars, sigma Sco, rho Oph, and theta 1 Ori C, with values of R/sub v/[equivalentA/sub v//E(B--V)] of 3.4, 4.4, and 5.5 compared to the normal 3.1. Two (sigma Sco, rho Oph) are in a neutral dense cloud; theta 1 Ori C is in the Orion Nebula. We find that sigma Sco has a normal graphite distribution but has had its small silicate particles removed, so that a/sub -/(sil)roughly-equal0.04 μm if q = 3.5, or q(sil) = 2.6 if the size limits are fixed. However, the upper size limit on silicates remains normal. In rho Oph, the graphite is still normal, but both a/sub -/(sil) and a/sub +/(sil) are increased, to about 0.04 μm and 0.4 or 0.5 μm, respectively, if q = 3.5, or q(sil)roughly-equal1.3 if the size limits are fixed. In theta 1 Ori, the small limit on graphite has increased to about 0.04 μm, or q(gra)roughly-equal3, while the silicates are about like those in rho Oph. The calculated lambda2175 bump is broader than the observed, but normal foreground extinction probably contributes appreciably to the observed bump. The absolute amount of extinction per H atom for rho Oph is not explained. The column density of H is so large that systematic effects might be present. Very large graphite particles (a>3 μm) are required to ''hide'' the graphite without overly affecting the visual extinction, but a normal (small) graphite size distribution is required by the lambda2175 bump. We feel that it is unlikely that such a bimodal distribution exists

  7. The apparent and effective chloride migration coefficients obtained in migration tests

    NARCIS (Netherlands)

    Spiesz, P.R.; Brouwers, H.J.H.

    2013-01-01

    The apparent (Dapp) and effective (Deff) migration coefficients obtained in chloride migration tests are investigated in this study. The presented Dapp profiles in concrete show that the apparent migration coefficient is strongly concentration-dependent. As demonstrated, the binding of chlorides is

  8. Study of transport coefficients of nanodiamond nanofluids

    Science.gov (United States)

    Pryazhnikov, M. I.; Minakov, A. V.; Guzei, D. V.

    2017-09-01

    Experimental data on the thermal conductivity coefficient and viscosity coefficient of nanodiamond nanofluids are presented. Distilled water and ethylene glycol were used as the base fluid. Dependences of transport coefficients on concentration are obtained. It was shown that the thermal conductivity coefficient increases with increasing nanodiamonds concentration. It was shown that base fluids properties and nanodiamonds concentration affect on the rheology of nanofluids.

  9. ON GALACTIC DENSITY MODELING IN THE PRESENCE OF DUST EXTINCTION

    International Nuclear Information System (INIS)

    Bovy, Jo; Rix, Hans-Walter; Schlafly, Edward F.; Green, Gregory M.; Finkbeiner, Douglas P.

    2016-01-01

    Inferences about the spatial density or phase-space structure of stellar populations in the Milky Way require a precise determination of the effective survey volume. The volume observed by surveys such as Gaia or near-infrared spectroscopic surveys, which have good coverage of the Galactic midplane region, is highly complex because of the abundant small-scale structure in the three-dimensional interstellar dust extinction. We introduce a novel framework for analyzing the importance of small-scale structure in the extinction. This formalism demonstrates that the spatially complex effect of extinction on the selection function of a pencil-beam or contiguous sky survey is equivalent to a low-pass filtering of the extinction-affected selection function with the smooth density field. We find that the angular resolution of current 3D extinction maps is sufficient for analyzing Gaia sub-samples of millions of stars. However, the current distance resolution is inadequate and needs to be improved by an order of magnitude, especially in the inner Galaxy. We also present a practical and efficient method for properly taking the effect of extinction into account in analyses of Galactic structure through an effective selection function. We illustrate its use with the selection function of red-clump stars in APOGEE using and comparing a variety of current 3D extinction maps

  10. Empirical relationship of ultraviolet extinction and the interstellar diffuse bands

    International Nuclear Information System (INIS)

    Wu, C.; York, D.G.; Snow, T.P.

    1981-01-01

    New ultraviolet colors are presented for 110 hot stars. These data are combined with infrared colors and diffuse-band measurements to study the relationship of diffuse interstellar bands (lambdalambda4430, 5780, 6284) to the overall extinction curve. Equivalent widths of lambdalambda5780 and 6284 are not well correlated with infrared, visible, or ultraviolet extinction measurements for stars in our sample. The central depth of lambda4430 is well correlated with visible and infrared extinction, but less well correlated with UV extinction at 1800 A. lambda4430 is strongly correlated with the strength of the 2200-A bump. Our data suggest that if small grains account for the general rise in UV extinction, the diffuse bands are not formed in these grains. lambda4430 may well arise in large grains and/or in the material responsible for the 2200-A bump. Correlations with UV extinctions derived by other authors are discussed in detail. It is suggested that definitions of extinction parameters and band shapes, as well as selection effects in small samples of stars, may still compromise conclusions based on correlation studies such as we are attempting

  11. LINE DERIVED INFRARED EXTINCTION TOWARD THE GALACTIC CENTER

    International Nuclear Information System (INIS)

    Fritz, T. K.; Gillessen, S.; Dodds-Eden, K.; Lutz, D.; Genzel, R.; Raab, W.; Ott, T.; Pfuhl, O.; Eisenhauer, F.; Yusef-Zadeh, F.

    2011-01-01

    We derive the extinction curve toward the Galactic center (GC) from 1 to 19 μm. We use hydrogen emission lines of the minispiral observed by ISO-SWS and SINFONI. The extinction-free flux reference is the 2 cm continuum emission observed by the Very Large Array. Toward the inner 14'' x 20'', we find an extinction of A 2.166μm = 2.62 ± 0.11, with a power-law slope of α = -2.11 ± 0.06 shortward of 2.8 μm, consistent with the average near-infrared slope from the recent literature. At longer wavelengths, however, we find that the extinction is grayer than shortward of 2.8 μm. We find that it is not possible to fit the observed extinction curve with a dust model consisting of pure carbonaceous and silicate grains only, and the addition of composite particles, including ices, is needed to explain the observations. Combining a distance-dependent extinction with our distance-independent extinction, we derive the distance to the GC to be R 0 = 7.94 ± 0.65 kpc. Toward Sgr A* (r H = 4.21 ± 0.10, A Ks = 2.42 ± 0.10, and A L' = 1.09 ± 0.13.

  12. ON GALACTIC DENSITY MODELING IN THE PRESENCE OF DUST EXTINCTION

    Energy Technology Data Exchange (ETDEWEB)

    Bovy, Jo [Department of Astronomy and Astrophysics, University of Toronto, 50 St. George Street, Toronto, ON, M5S 3H4 (Canada); Rix, Hans-Walter; Schlafly, Edward F. [Max-Planck-Institut für Astronomie, Königstuhl 17, D-69117 Heidelberg (Germany); Green, Gregory M.; Finkbeiner, Douglas P., E-mail: bovy@astro.utoronto.ca [Harvard-Smithsonian Center for Astrophysics, 60 Garden Street, Cambridge, MA 02138 (United States)

    2016-02-20

    Inferences about the spatial density or phase-space structure of stellar populations in the Milky Way require a precise determination of the effective survey volume. The volume observed by surveys such as Gaia or near-infrared spectroscopic surveys, which have good coverage of the Galactic midplane region, is highly complex because of the abundant small-scale structure in the three-dimensional interstellar dust extinction. We introduce a novel framework for analyzing the importance of small-scale structure in the extinction. This formalism demonstrates that the spatially complex effect of extinction on the selection function of a pencil-beam or contiguous sky survey is equivalent to a low-pass filtering of the extinction-affected selection function with the smooth density field. We find that the angular resolution of current 3D extinction maps is sufficient for analyzing Gaia sub-samples of millions of stars. However, the current distance resolution is inadequate and needs to be improved by an order of magnitude, especially in the inner Galaxy. We also present a practical and efficient method for properly taking the effect of extinction into account in analyses of Galactic structure through an effective selection function. We illustrate its use with the selection function of red-clump stars in APOGEE using and comparing a variety of current 3D extinction maps.

  13. Sexual selection affects local extinction and turnover in bird communities

    Science.gov (United States)

    Doherty, P.F.; Sorci, G.; Royle, J. Andrew; Hines, J.E.; Nichols, J.D.; Boulinier, T.

    2003-01-01

    Predicting extinction risks has become a central goal for conservation and evolutionary biologists interested in population and community dynamics. Several factors have been put forward to explain risks of extinction, including ecological and life history characteristics of individuals. For instance, factors that affect the balance between natality and mortality can have profound effects on population persistence. Sexual selection has been identified as one such factor. Populations under strong sexual selection experience a number of costs ranging from increased predation and parasitism to enhanced sensitivity to environmental and demographic stochasticity. These findings have led to the prediction that local extinction rates should be higher for species/populations with intense sexual selection. We tested this prediction by analyzing the dynamics of natural bird communities at a continental scale over a period of 21 years (1975-1996), using relevant statistical tools. In agreement with the theoretical prediction, we found that sexual selection increased risks of local extinction (dichromatic birds had on average a 23% higher local extinction rate than monochromatic species). However, despite higher local extinction probabilities, the number of dichromatic species did not decrease over the period considered in this study. This pattern was caused by higher local turnover rates of dichromatic species, resulting in relatively stable communities for both groups of species. Our results suggest that these communities function as metacommunities, with frequent local extinctions followed by colonization. Anthropogenic factors impeding dispersal might therefore have a significant impact on the global persistence of sexually selected species.

  14. Relationship of extinction to perceptual thresholds for single stimuli.

    Science.gov (United States)

    Meador, K J; Ray, P G; Day, L J; Loring, D W

    2001-04-24

    To demonstrate the effects of target stimulus intensity on extinction to double simultaneous stimuli. Attentional deficits contribute to extinction in patients with brain lesions, but extinction (i.e., masking) can also be produced in healthy subjects. The relationship of extinction to perceptual thresholds for single stimuli remains uncertain. Brief electrical pulses were applied simultaneously to the left and right index fingers of 16 healthy volunteers (8 young and 8 elderly adults) and 4 patients with right brain stroke (RBS). The stimulus to be perceived (i.e., target stimulus) was given at the lowest perceptual threshold to perceive any single stimulus (i.e., Minimal) and at the threshold to perceive 100% of single stimuli. The mask stimulus (i.e., stimulus given to block the target) was applied to the contralateral hand at intensities just below discomfort. Extinction was less for target stimuli at 100% than Minimal threshold for healthy subjects. Extinction of left targets was greater in patients with RBS than elderly control subjects. Left targets were extinguished less than right in healthy subjects. In contrast, the majority of left targets were extinguished in patients with RBS even when right mask intensity was reduced below right 100% threshold for single stimuli. RBS patients had less extinction for right targets despite having greater left mask - threshold difference than control subjects. In patients with RBS, right "targets" at 100% threshold extinguished left "masks" (20%) almost as frequently as left masks extinguished right targets (32%). Subtle changes in target intensity affect extinction in healthy adults. Asymmetries in mask and target intensities (relative to single-stimulus perceptual thresholds) affect extinction in RBS patients less for left targets but more for right targets as compared with control subjects.

  15. Geography of current and future global mammal extinction risk.

    Directory of Open Access Journals (Sweden)

    Ana D Davidson

    Full Text Available Identifying which species are at greatest risk, what makes them vulnerable, and where they are distributed are central goals for conservation science. While knowledge of which factors influence extinction risk is increasingly available for some taxonomic groups, a deeper understanding of extinction correlates and the geography of risk remains lacking. Here, we develop a predictive random forest model using both geospatial and mammalian species' trait data to uncover the statistical and geographic distributions of extinction correlates. We also explore how this geography of risk may change under a rapidly warming climate. We found distinctive macroecological relationships between species-level risk and extinction correlates, including the intrinsic biological traits of geographic range size, body size and taxonomy, and extrinsic geographic settings such as seasonality, habitat type, land use and human population density. Each extinction correlate exhibited ranges of values that were especially associated with risk, and the importance of different risk factors was not geographically uniform across the globe. We also found that about 10% of mammals not currently recognized as at-risk have biological traits and occur in environments that predispose them towards extinction. Southeast Asia had the most actually and potentially threatened species, underscoring the urgent need for conservation in this region. Additionally, nearly 40% of currently threatened species were predicted to experience rapid climate change at 0.5 km/year or more. Biological and environmental correlates of mammalian extinction risk exhibit distinct statistical and geographic distributions. These results provide insight into species-level patterns and processes underlying geographic variation in extinction risk. They also offer guidance for future conservation research focused on specific geographic regions, or evaluating the degree to which species-level patterns mirror spatial

  16. Extinction of aversive classically conditioned human sexual response.

    Science.gov (United States)

    Brom, Mirte; Laan, Ellen; Everaerd, Walter; Spinhoven, Philip; Both, Stephanie

    2015-04-01

    Research has shown that acquired subjective likes and dislikes are quite resistant to extinction. Moreover, studies on female sexual response demonstrated that diminished genital arousal and positive affect toward erotic stimuli due to aversive classical conditioning did not extinguish during an extinction phase. Possible resistance to extinction of aversive conditioned sexual responses may have important clinical implications. However, resistance to extinction of aversive conditioned human sexual response has not been studied using extensive extinction trials. This article aims to study resistance to extinction of aversive conditioned sexual responses in sexually functional men and women. A differential conditioning experiment was conducted, with two erotic pictures as conditioned stimulus (CSs) and a painful stimulus as unconditioned stimuli (USs). Only one CS (the CS+) was followed by the US during the acquisition phase. Conditioned responses were assessed during the extinction phase. Penile circumference and vaginal pulse amplitude were assessed, and ratings of affective value and subjective sexual arousal were obtained. Also, a stimulus response compatibility task was included to assess automatic approach and avoidance tendencies. Men and women rated the CS+ more negative as compared with the CS-. During the first trials of the extinction phase, vaginal pulse amplitude was lower in response to the CS+ than in response to the CS-, and on the first extinction trial women rated the CS+ as less sexually arousing. Intriguingly, men did not demonstrate attenuated genital and subjective sexual response. Aversive conditioning, by means of painful stimuli, only affects sexual responses in women, whereas it does not in men. Although conditioned sexual likes and dislikes are relatively persistent, conditioned affect eventually does extinguish. © 2014 International Society for Sexual Medicine.

  17. d-Cycloserine reduces context specificity of sexual extinction learning.

    Science.gov (United States)

    Brom, Mirte; Laan, Ellen; Everaerd, Walter; Spinhoven, Philip; Trimbos, Baptist; Both, Stephanie

    2015-11-01

    d-Cycloserine (DCS) enhances extinction processes in animals. Although classical conditioning is hypothesized to play a pivotal role in the aetiology of appetitive motivation problems, no research has been conducted on the effect of DCS on the reduction of context specificity of extinction in human appetitive learning, while facilitation hereof is relevant in the context of treatment of problematic reward-seeking behaviors. Female participants were presented with two conditioned stimuli (CSs) that either predicted (CS+) or did not predict (CS-) a potential sexual reward (unconditioned stimulus (US); genital vibrostimulation). Conditioning took place in context A and extinction in context B. Subjects received DCS (125mg) or placebo directly after the experiment on day 1 in a randomized, double-blind, between-subject fashion (Placebo n=31; DCS n=31). Subsequent testing for CS-evoked conditioned responses (CRs) in both the conditioning (A) and the extinction context (B) took place 24h later on day 2. Drug effects on consolidation were then assessed by comparing the recall of sexual extinction memories between the DCS and the placebo groups. Post learning administration of DCS facilitates sexual extinction memory consolidation and affects extinction's fundamental context specificity, evidenced by reduced conditioned genital and subjective sexual responses, relative to placebo, for presentations of the reward predicting cue 24h later outside the extinction context. DCS makes appetitive extinction memories context-independent and prevents the return of conditioned response. NMDA receptor glycine site agonists may be potential pharmacotherapies for the prevention of relapse of appetitive motivation disorders with a learned component. Copyright © 2015 Elsevier Inc. All rights reserved.

  18. Geography of current and future global mammal extinction risk.

    Science.gov (United States)

    Davidson, Ana D; Shoemaker, Kevin T; Weinstein, Ben; Costa, Gabriel C; Brooks, Thomas M; Ceballos, Gerardo; Radeloff, Volker C; Rondinini, Carlo; Graham, Catherine H

    2017-01-01

    Identifying which species are at greatest risk, what makes them vulnerable, and where they are distributed are central goals for conservation science. While knowledge of which factors influence extinction risk is increasingly available for some taxonomic groups, a deeper understanding of extinction correlates and the geography of risk remains lacking. Here, we develop a predictive random forest model using both geospatial and mammalian species' trait data to uncover the statistical and geographic distributions of extinction correlates. We also explore how this geography of risk may change under a rapidly warming climate. We found distinctive macroecological relationships between species-level risk and extinction correlates, including the intrinsic biological traits of geographic range size, body size and taxonomy, and extrinsic geographic settings such as seasonality, habitat type, land use and human population density. Each extinction correlate exhibited ranges of values that were especially associated with risk, and the importance of different risk factors was not geographically uniform across the globe. We also found that about 10% of mammals not currently recognized as at-risk have biological traits and occur in environments that predispose them towards extinction. Southeast Asia had the most actually and potentially threatened species, underscoring the urgent need for conservation in this region. Additionally, nearly 40% of currently threatened species were predicted to experience rapid climate change at 0.5 km/year or more. Biological and environmental correlates of mammalian extinction risk exhibit distinct statistical and geographic distributions. These results provide insight into species-level patterns and processes underlying geographic variation in extinction risk. They also offer guidance for future conservation research focused on specific geographic regions, or evaluating the degree to which species-level patterns mirror spatial variation in the

  19. Correlation coefficients in neutron β-decay

    International Nuclear Information System (INIS)

    Byrne, J.

    1978-01-01

    The various angular and polarisation coefficients in neutron decay are the principal sources of information on the β-interaction. Measurements of the electron-neutrino angular correlation coefficient (a), the neutron-spin-electron-momentum correlation coefficient (A), the neutron-spin-neutrino-momentum correlation coefficient (B), and the triple correlation coefficient D and time-reversal invariance are reviewed and the results discussed. (U.K.)

  20. Semiconductor plasmonic crystals: active control of THz extinction

    International Nuclear Information System (INIS)

    Schaafsma, M C; Rivas, J Gómez

    2013-01-01

    We investigate theoretically the enhanced THz extinction by periodic arrays of semiconductor particles. Scattering particles of doped semiconductors can sustain localized surface plasmon polaritons, which can be diffractively coupled giving rise to surface lattice resonances. These resonances are characterized by a large extinction and narrow bandwidth, which can be tuned by controlling the charge carrier density in the semiconductor. The underlaying mechanism leading to this tuneability is explained using the coupled dipole approximation and considering GaAs as the semiconductor. The enhanced THz extinction in arrays of GaAs particles could be tuned in a wide range by optical pumping of charge carriers. (invited article)

  1. Extinction in finite perfect crystals: Case of a sphere

    International Nuclear Information System (INIS)

    Al Haddad, M.; Becker, P.

    1990-01-01

    The extinction factor in finite perfect crystals is calculated from pure dynamical theory. In particular, a detailed solution is proposed for a sphere, in which case the extinction factor depends on the Bragg angle θ and the parameter (R/Λ), where R is the radius of the crystal and Λ the extinction length. An approximate solution based on the Laue geometry is proposed and corrections to take care of the complex boundary conditions are presented. An expression easily usable in refinement programs is proposed that fits the exact value to better than 1%. (orig.)

  2. Extinction partially reverts structural changes associated with remote fear memory

    DEFF Research Database (Denmark)

    Vetere, Gisella; Restivo, Leonardo; Novembre, Giovanni

    2011-01-01

    Structural synaptic changes occur in medial prefrontal cortex circuits during remote memory formation. Whether extinction reverts or further reshapes these circuits is, however, unknown. Here we show that the number and the size of spines were enhanced in anterior cingulate (aCC) and infralimbic...... (ILC) cortices 36 d following contextual fear conditioning. Upon extinction, aCC spine density returned to baseline, but the enhanced proportion of large spines did not. Differently, ILC spine density remained elevated, but the size of spines decreased dramatically. Thus, extinction partially erases...

  3. Variations in ultraviolet extinction: effect of polarization revisited

    International Nuclear Information System (INIS)

    Greenberg, J.M.; Chlewicki, G.; Rijksuniversiteit Groningen

    1987-01-01

    The alignment of the particles responsible for the polarization and visual extinction is shown to provide a basis for changing the saturation level of the ultraviolet extinction without changing the particle sizes. If the particles are well aligned, it is predicted that there should be significantly lower extinction in the ultraviolet relative to the visible for stars viewed perpendicular to magnetic-field lines (maximum polarization) as compared with those viewed across the field lines. Preliminary evidence for such an effect is noted in Carina. (author)

  4. High extinction ratio integrated optical modulator for quantum telecommunication systems

    Science.gov (United States)

    Tronev, A.; Parfenov, M.; Agruzov, P.; Ilichev, I.; Shamray, A.

    2018-01-01

    A method for increasing the extinction ratio of integrated optical Mach-Zehnder modulators based on LiNbO3 via the photorefractive effect is proposed. The influence of the photorefractive effect on the X- and Y-splitters of intensity modulators is experimentally studied. An increase in the modulator extinction ratio by 17 dB (from 30 to 47 dB) is obtained. It is shown that fabricated modulators with a high extinction ratio are important for quantum key distribution systems.

  5. The use of extinction corrections in neutron diffraction experiments

    International Nuclear Information System (INIS)

    Delapalme, A.

    1987-08-01

    Extinction can be treated through various models originating in either kinematical (intensity coupling) or dynamical (wave coupling) theories. For most crystals the situation is intermediate between these two extreme cases and extinction models are necessary to obtain precise Fourier components (structure factors) and the electronic and magnetic distribution in molecules and crystals. New models reveal new parameters and new effects of their role in the Extinction phenomena, but the phenomenological aspect of the solutions shows the difficulty to describe adequately what happens in real crystals

  6. Characterization of Diesel Soot Aggregates by Scattering and Extinction Methods

    Science.gov (United States)

    Kamimoto, Takeyuki

    2006-07-01

    Characteristics of diesel soot particles sampled from diesel exhaust of a common-rail turbo-charged diesel engine are quantified by scattering and extinction diagnostics using newly build two laser-based instruments. The radius of gyration representing the aggregates size is measured by the angular distribution of scattering intensity, while the soot mass concentration is measured by a two-wavelength extinction method. An approach to estimate the refractive index of diesel soot by an analysis of the extinction and scattering data using an aggregates scattering theory is proposed.

  7. Characterization of Diesel Soot Aggregates by Scattering and Extinction Methods

    International Nuclear Information System (INIS)

    Kamimoto, Takeyuki

    2006-01-01

    Characteristics of diesel soot particles sampled from diesel exhaust of a common-rail turbo-charged diesel engine are quantified by scattering and extinction diagnostics using newly build two laser-based instruments. The radius of gyration representing the aggregates size is measured by the angular distribution of scattering intensity, while the soot mass concentration is measured by a two-wavelength extinction method. An approach to estimate the refractive index of diesel soot by an analysis of the extinction and scattering data using an aggregates scattering theory is proposed

  8. Two lines of sight with exceedingly anomalous ultraviolet interstellar extinction

    International Nuclear Information System (INIS)

    Cardelli, J.A.; Savage, B.D.

    1988-01-01

    Low-resolution IUE data toward HD 62542 reveal an extinction curve with an extremely broad and weak UV extinction bump and the highest FUV extinction yet observed in the Milky Way. Parameters describing the central position and FWHM for weak bumps observed toward HD 62542 and HD 29647 are derived using analytical fitting techniques. In both cases, the bump central positions are shifted shortward of 2175 A with an initial wavelength of 2110 A for HD 62542 and an initial wavelength of 2128 A for HD 29647. The bump FWHM is found to be 1.29/micron and 1.62/micron for HD 62542 and HD 29647, respectively. 75 references

  9. Noradrenergic stimulation modulates activation of extinction-related brain regions and enhances contextual extinction learning without affecting renewal

    Directory of Open Access Journals (Sweden)

    Silke eLissek

    2015-02-01

    Full Text Available Renewal in extinction learning describes the recovery of an extinguished response if the extinction context differs from the context present during acquisition and recall. Attention may have a role in contextual modulation of behavior and contribute to the renewal effect, while noradrenaline is involved in attentional processing. In this functional magnetic resonance imaging (fMRI study we investigated the role of the noradrenergic system for behavioral and brain activation correlates of contextual extinction and renewal, with a particular focus upon hippocampus and ventromedial PFC, which have crucial roles in processing of renewal. Healthy human volunteers received a single dose of the NA reuptake inhibitor atomoxetine prior to extinction learning. During extinction of previously acquired cue-outcome associations, cues were presented in a novel context (ABA or in the acquisition context (AAA. In recall, all cues were again presented in the acquisition context. Atomoxetine participants (ATO showed significantly faster extinction compared to placebo (PLAC. However, atomoxetine did not affect renewal. Hippocampal activation was higher in ATO during extinction and recall, as was ventromedial PFC activation, except for ABA recall. Moreover, ATO showed stronger recruitment of insula, anterior cingulate, and dorsolateral/orbitofrontal PFC. Across groups, cingulate, hippocampus and vmPFC activity during ABA extinction correlated with recall performance, suggesting high relevance of these regions for processing the renewal effect. In summary, the noradrenergic system appears to be involved in the modification of established associations during extinction learning and thus has a role in behavioral flexibility. The assignment of an association to a context and the subsequent decision on an adequate response, however, presumably operate largely independently of noradrenergic mechanisms.

  10. Relationship between exploitation, oscillation, MSY and extinction.

    Science.gov (United States)

    Ghosh, Bapan; Kar, T K; Legovic, T

    2014-10-01

    We give answers to two important problems arising in current fisheries: (i) how maximum sustainable yield (MSY) policy is influenced by the initial population level, and (ii) how harvesting, oscillation and MSY are related to each other in prey-predator systems. To examine the impact of initial population on exploitation, we analyze a single species model with strong Allee effect. It is found that even when the MSY exists, the dynamic solution may not converge to the equilibrium stock if the initial population level is higher but near the critical threshold level. In a prey-predator system with Allee effect in the prey species, the initial population does not have such important impact neither on MSY nor on maximum sustainable total yield (MSTY). However, harvesting the top predator may cause extinction of all species if odd number of trophic levels exist in the ecosystem. With regard to the second problem, we study two prey-predator models and establish that increasing harvesting effort either on prey, predator or both prey and predator destroys previously existing oscillation. Moreover, equilibrium stock both at MSY and MSTY level is stable. We also discuss the validity of found results to other prey-predator systems. Copyright © 2014 Elsevier Inc. All rights reserved.

  11. Are Isolated Indigenous Populations Headed toward Extinction?

    Directory of Open Access Journals (Sweden)

    Robert S Walker

    Full Text Available At least 50 indigenous groups spread across lowland South America remain isolated and have only intermittent and mostly hostile interactions with the outside world. Except in emergency situations, the current policy of governments in Brazil, Colombia, and Peru towards isolated tribes is a "leave them alone" strategy, in which isolated groups are left uncontacted. However, these no-contact policies are based on the assumption that isolated populations are healthy and capable of persisting in the face of mounting external threats, and that they can maintain population viability in the long-term. Here, we test this assumption by tracking the sizes and movements of cleared horticultural areas made by 8 isolated groups over the last 10-14 years. We used deforestation data derived from remote sensing Landsat satellite sensors to identify clearings, and those were then validated and assessed with high-resolution imagery. We found only a single example of a relatively large and growing population (c. 50 cleared ha and 400 people, whereas all of the other 7 groups exhibited much smaller villages and gardens with no sizable growth through time. These results indicated that the smaller groups are critically endangered, and it prompts an urgent re-thinking of policies toward isolated populations, including plans for well-organized contacts that may help save lives and rescue isolated indigenous populations from imminent extinction.

  12. Are Isolated Indigenous Populations Headed toward Extinction?

    Science.gov (United States)

    Walker, Robert S; Kesler, Dylan C; Hill, Kim R

    2016-01-01

    At least 50 indigenous groups spread across lowland South America remain isolated and have only intermittent and mostly hostile interactions with the outside world. Except in emergency situations, the current policy of governments in Brazil, Colombia, and Peru towards isolated tribes is a "leave them alone" strategy, in which isolated groups are left uncontacted. However, these no-contact policies are based on the assumption that isolated populations are healthy and capable of persisting in the face of mounting external threats, and that they can maintain population viability in the long-term. Here, we test this assumption by tracking the sizes and movements of cleared horticultural areas made by 8 isolated groups over the last 10-14 years. We used deforestation data derived from remote sensing Landsat satellite sensors to identify clearings, and those were then validated and assessed with high-resolution imagery. We found only a single example of a relatively large and growing population (c. 50 cleared ha and 400 people), whereas all of the other 7 groups exhibited much smaller villages and gardens with no sizable growth through time. These results indicated that the smaller groups are critically endangered, and it prompts an urgent re-thinking of policies toward isolated populations, including plans for well-organized contacts that may help save lives and rescue isolated indigenous populations from imminent extinction.

  13. Giant comets and mass extinctions of life

    Science.gov (United States)

    Napier, W. M.

    2015-03-01

    I find evidence for clustering in age of well-dated impact craters over the last 500 Myr. At least nine impact episodes are identified, with durations whose upper limits are set by the dating accuracy of the craters. Their amplitudes and frequency are inconsistent with an origin in asteroid breakups or Oort cloud disturbances, but are consistent with the arrival and disintegration in near-Earth orbits of rare, giant comets, mainly in transit from the Centaur population into the Jupiter family and Encke regions. About 1 in 10 Centaurs in Chiron-like orbits enter Earth-crossing epochs, usually repeatedly, each such epoch being generally of a few thousand years' duration. On time-scales of geological interest, debris from their breakup may increase the mass of the near-Earth interplanetary environment by two or three orders of magnitude, yielding repeated episodes of bombardment and stratospheric dusting. I find a strong correlation between these bombardment episodes and major biostratigraphic and geological boundaries, and propose that episodes of extinction are most effectively driven by prolonged encounters with meteoroid streams during bombardment episodes. Possible mechanisms are discussed.

  14. Mammal extinctions in the Vallesian (Upper Miocene)

    Science.gov (United States)

    Agusti, J.; Moya-Sola, S.

    The term Vallesian was created by Crusafont (1950) to designate the first European Mammalian palaeofaunas containing the equid Hipparion, the remainder of the faunas being composed of typical elements coming from the Middle Miocene such as Micromeryx, Euprox, Sansanosmilus, Pseudaelurus, and Listriodon. Thus, the Aragonian-Vallesian boundary does not show a strong change among European Miocene mammalian faunas (Agusti et al., 1984). On the other hand, the Lower Vallesian/Upper Vallesian transition corresponds to a major biotic crisis. This boudnary is characterized by the disappearence of most of the Aragonian artiodactyl forms such as Protragocerus, Miotragocerus, Listriodon, Hyotherium, Parachleusastochoerus, etc. Among the rodents, this crisis affects the family Eomyidae and most of the cricetid and glirid species. On the other hand, a number of eastern elements appear in the area at the same time. This is the case of the suid Schizochoerus and the murid Progonomys. Other eastern forms are Tragoportax, Graecoryx, Adcrocuta, Paramachairodus, Microstonyx, etc. Most of these are typical elements of the next Mammal stage, the Turolian. Thus, whereas the Lower Vallesian fauna has a typical Aragonian composition except for Hipparion. After the Middle Vallesian event, the Upper Vallesian faunas are already largely Turolian in character. The possible factors involved in this extinction event are discussed.

  15. Correlation between phosphorylation level of a hippocampal 86kDa protein and extinction of a behaviour in a model of Wernicke-Korsakoff syndrome.

    Science.gov (United States)

    Pires, Rita G W; Pereira, Sílvia R C; Carvalho, Fabiana M; Oliveira-Silva, Ieda F; Ferraz, Vany P; Ribeiro, Angela M

    2007-06-04

    The effects of chronic ethanol and thiamine deficiency, alone or associated, on hippocampal protein phosphorylation profiles ranging in molecular weight from 30 to 250kDa molecular weight, in stimulated (high K(+) concentration) and unstimulated (basal) conditions were investigated. These treatments significantly changed the phosphorylation level of an 86kDa phosphoprotein. Thiamine deficiency, but not chronic ethanol, induced a decrease in a behavioural extinction index, which is significantly correlated to the phosphorylation level of the p86 protein. These data add to and extend previous findings by our laboratory implicating the involvement of hippocampal neurotransmission components in extinction of a behaviour which involves learning of environmental spatial cues.

  16. Effects of overtraining on extinction in newts (Cynops pyrrhogaster).

    Science.gov (United States)

    Shibasaki, Masahiro; Ishida, Masato

    2012-11-01

    The overtraining extinction effect (OEE), a phenomenon in which extended training facilitates extinction, has been found in mammals and reptiles. However, fish have never shown OEE. No study has yet investigated OEE in newts, a representative amphibian species. We tested whether newts, Cynops pyrrhogaster, show OEE in a straight-array task. All animals received five trials per day and were given a piece of dried worm during reinforced trials. They showed significant acquisition and extinction effects in reinforced and nonreinforced trials. However, we found no difference in extinction performance between a group with 25-trial acquisition and one with 75-trial acquisition, suggesting that OEE was not found in newts. OEE has generally been explained in terms of frustration-related mechanisms. Our results suggest that emotional reactions to nonreward, such as frustration, may not influence behavior in amphibians.

  17. Semiconductor plasmonic crystals : active control of THz extinction

    NARCIS (Netherlands)

    Schaafsma, M.C.; Gomez Rivas, J.

    2013-01-01

    We investigate theoretically the enhanced THz extinction by periodic arrays of semiconductor particles. Scattering particles of doped semiconductors can sustain localized surface plasmon polaritons, which can be diffractively coupled giving rise to surface lattice resonances. These resonances are

  18. Observational evidence of dust evolution in galactic extinction curves

    Energy Technology Data Exchange (ETDEWEB)

    Cecchi-Pestellini, Cesare [INAF-Osservatorio Astronomico di Palermo, P.zza Parlamento 1, I-90134 Palermo (Italy); Casu, Silvia; Mulas, Giacomo [INAF-Osservatorio Astronomico di Cagliari, Via della Scienza, I-09047 Selargius (Italy); Zonca, Alberto, E-mail: cecchi-pestellini@astropa.unipa.it, E-mail: silvia@oa-cagliari.inaf.it, E-mail: gmulas@oa-cagliari.inaf.it, E-mail: azonca@oa-cagliari.inaf.it [Dipartimento di Fisica, Università di Cagliari, Strada Prov.le Monserrato-Sestu Km 0.700, I-09042 Monserrato (Italy)

    2014-04-10

    Although structural and optical properties of hydrogenated amorphous carbons are known to respond to varying physical conditions, most conventional extinction models are basically curve fits with modest predictive power. We compare an evolutionary model of the physical properties of carbonaceous grain mantles with their determination by homogeneously fitting observationally derived Galactic extinction curves with the same physically well-defined dust model. We find that a large sample of observed Galactic extinction curves are compatible with the evolutionary scenario underlying such a model, requiring physical conditions fully consistent with standard density, temperature, radiation field intensity, and average age of diffuse interstellar clouds. Hence, through the study of interstellar extinction we may, in principle, understand the evolutionary history of the diffuse interstellar clouds.

  19. Motor Extinction in Distinct Reference Frames: A Double Dissociation

    Directory of Open Access Journals (Sweden)

    Jennifer Heidler-Gary

    2013-01-01

    Full Text Available Objective: Test the hypothesis that right hemisphere stroke can cause extinction of left hand movements or movements of either hand held in left space, when both are used simultaneously, possibly depending on lesion site.

  20. Manipulating parameters of reinforcement to reduce problem behavior without extinction.

    Science.gov (United States)

    Kunnavatana, S Shanun; Bloom, Sarah E; Samaha, Andrew L; Slocum, Timothy A; Clay, Casey J

    2018-04-01

    Differential reinforcement of alternative behavior (DRA) most often includes extinction as a treatment component. However, extinction is not always feasible and it can be counter-therapeutic if implemented without optimal treatment integrity. Researchers have successfully implemented DRA without extinction by manipulating various parameters of reinforcement such that alternative behavior is favored. We extended previous research by assessing three participants' sensitivities to quality, magnitude, and immediacy using arbitrary responses and reinforcers that maintain problem behavior. The results were used to implement an intervention for problem behavior using DRA without extinction. Our findings indicate that arbitrary responses can be used to identify individual and relative sensitivity to parameters of reinforcement for reinforcers that maintain problem behavior. Treatment was effective for all participants when we manipulated parameters of reinforcement to which they were most sensitive, and, for two participants, the treatment was less effective when we manipulated parameters to which they were least sensitive. © 2018 Society for the Experimental Analysis of Behavior.

  1. Safety Behavior After Extinction Triggers a Return of Threat Expectancy

    NARCIS (Netherlands)

    van Uijen, S.L.; Leer, A.; Engelhard, I.M.

    2018-01-01

    Safety behavior is involved in the maintenance of anxiety disorders, presumably because it prevents the violation of negative expectancies. Recent research showed that safety behavior is resistant to fear extinction. This fear conditioning study investigated whether safety behavior after fear

  2. Extinction order and altered community structure rapidly disrupt ecosystem functioning.

    Science.gov (United States)

    Larsen, Trond H; Williams, Neal M; Kremen, Claire

    2005-05-01

    By causing extinctions and altering community structure, anthropogenic disturbances can disrupt processes that maintain ecosystem integrity. However, the relationship between community structure and ecosystem functioning in natural systems is poorly understood. Here we show that habitat loss appeared to disrupt ecosystem functioning by affecting extinction order, species richness and abundance. We studied pollination by bees in a mosaic of agricultural and natural habitats in California and dung burial by dung beetles on recently created islands in Venezuela. We found that large-bodied bee and beetle species tended to be both most extinction-prone and most functionally efficient, contributing to rapid functional loss. Simulations confirmed that extinction order led to greater disruption of function than predicted by random species loss. Total abundance declined with richness and also appeared to contribute to loss of function. We demonstrate conceptually and empirically how the non-random response of communities to disturbance can have unexpectedly large functional consequences.

  3. Extinction of Aversive Classically Conditioned Human Sexual Response

    NARCIS (Netherlands)

    Brom, M.; Laan, E.; Everaerd, W.; Spinhoven, P.; Both, S.

    INTRODUCTION: Research has shown that acquired subjective likes and dislikes are quite resistant to extinction. Moreover, studies on female sexual response demonstrated that diminished genital arousal and positive affect toward erotic stimuli due to aversive classical conditioning did not extinguish

  4. An extinct vertebrate preserved by its living hybridogenetic descendant.

    Science.gov (United States)

    Dubey, Sylvain; Dufresnes, Christophe

    2017-10-06

    Hybridogenesis is a special mode of hybrid reproduction where one parental genome is eliminated and the other is transmitted clonally. We propose that this mechanism can perpetuate the genome of extinct species, based on new genetic data from Pelophylax water frogs. We characterized the genetic makeup of Italian hybridogenetic hybrids (P. kl. hispanicus and esculentus) and identified a new endemic lineage of Eastern-Mediterranean origin as one parental ancestor of P. kl. hispanicus. This taxon is nowadays extinct in the wild but its germline subsists through its hybridogenetic descendant, which can thus be considered as a "semi living fossil". Such rare situation calls for realistic efforts of de-extinction through selective breeding without genetic engineering, and fuels the topical controversy of reviving long extinct species. "Ghost" species hidden by taxa of hybrid origin may be more frequent than suspected in vertebrate groups that experienced a strong history of hybridization and semi-sexual reproduction.

  5. The ultraviolet interstellar extinction curve in the Pleiades

    Science.gov (United States)

    Witt, A. N.; Bohlin, R. C.; Stecher, T. P.

    1981-01-01

    The wavelength dependence of ultraviolet extinction in the Pleiades dust clouds has been determined from IUE observations of HD 23512, the brightest heavily reddened member of the Pleiades cluster. There is evidence for an anomalously weak absorption bump at 2200 A, followed by an extinction rise in the far ultraviolet with an essentially normal slope. A relatively weak absorption band at 2200 A and a weak diffuse absorption band at 4430 A seem to be common characteristics of dust present in dense clouds. Evidence is presented which suggests that the extinction characteristics found for HD 23512 are typical for a class of extinction curves observed in several cases in the Galaxy and in the LMC.

  6. Trends in the extinction of carnivores in Madagascar

    Directory of Open Access Journals (Sweden)

    Cartagena–Matos, B.

    2017-02-01

    Full Text Available The extinction of top predators, such as mammalian carnivores can lead to dramatic changes in foodweb structure and ecosystem dynamics. Since all native Malagasy terrestrial mammalian carnivores are endemic, their extinction implies a significant loss of biodiversity in Madagascar. Here we review the literature on Madagascar’s mammalian carnivores, aiming to determine which species are most likely to become extinct in the near future in view of the factors threatening their survival. We scored each factor according to its impact on the species. According to our results, the giant–striped mongoose, Galidictis grandidieri, is the most likely species to next become extinct. This is no surprise because this species is considered one of the rarest carnivores in the world, inhabiting only a small, threatened forest ecosystem. Our results emphasize the need for robust data about each species to help and support decision–makers implement conservation measures.

  7. Climate warming drives local extinction: Evidence from observation and experimentation

    Science.gov (United States)

    Panetta, Anne Marie; Stanton, Maureen L.; Harte, John

    2018-01-01

    Despite increasing concern about elevated extinction risk as global temperatures rise, it is difficult to confirm causal links between climate change and extinction. By coupling 25 years of in situ climate manipulation with experimental seed introductions and both historical and current plant surveys, we identify causal, mechanistic links between climate change and the local extinction of a widespread mountain plant (Androsace septentrionalis). Climate warming causes precipitous declines in population size by reducing fecundity and survival across multiple life stages. Climate warming also purges belowground seed banks, limiting the potential for the future recovery of at-risk populations under ameliorated conditions. Bolstered by previous reports of plant community shifts in this experiment and in other habitats, our findings not only support the hypothesis that climate change can drive local extinction but also foreshadow potentially widespread species losses in subalpine meadows as climate warming continues. PMID:29507884

  8. Climate warming drives local extinction: Evidence from observation and experimentation.

    Science.gov (United States)

    Panetta, Anne Marie; Stanton, Maureen L; Harte, John

    2018-02-01

    Despite increasing concern about elevated extinction risk as global temperatures rise, it is difficult to confirm causal links between climate change and extinction. By coupling 25 years of in situ climate manipulation with experimental seed introductions and both historical and current plant surveys, we identify causal, mechanistic links between climate change and the local extinction of a widespread mountain plant ( Androsace septentrionalis ). Climate warming causes precipitous declines in population size by reducing fecundity and survival across multiple life stages. Climate warming also purges belowground seed banks, limiting the potential for the future recovery of at-risk populations under ameliorated conditions. Bolstered by previous reports of plant community shifts in this experiment and in other habitats, our findings not only support the hypothesis that climate change can drive local extinction but also foreshadow potentially widespread species losses in subalpine meadows as climate warming continues.

  9. Kerr scattering coefficients via isomonodromy

    Energy Technology Data Exchange (ETDEWEB)

    Cunha, Bruno Carneiro da [Departamento de Física, Universidade Federal de Pernambuco,50670-901, Recife, Pernambuco (Brazil); Novaes, Fábio [International Institute of Physics, Federal University of Rio Grande do Norte,Av. Odilon Gomes de Lima 1722, Capim Macio, Natal-RN 59078-400 (Brazil)

    2015-11-23

    We study the scattering of a massless scalar field in a generic Kerr background. Using a particular gauge choice based on the current conservation of the radial equation, we give a generic formula for the scattering coefficient in terms of the composite monodromy parameter σ between the inner and the outer horizons. Using the isomonodromy flow, we calculate σ exactly in terms of the Painlevé V τ-function. We also show that the eigenvalue problem for the angular equation (spheroidal harmonics) can be calculated using the same techniques. We use recent developments relating the Painlevé V τ-function to Liouville irregular conformal blocks to claim that this scattering problem is solved in the combinatorial sense, with known expressions for the τ-function near the critical points.

  10. Seed Dispersal Anachronisms: Rethinking the Fruits Extinct Megafauna Ate

    OpenAIRE

    Guimarães, Paulo R.; Galetti, Mauro; Jordano, Pedro

    2008-01-01

    Background: Some neotropical, fleshy-fruited plants have fruits structurally similar to paleotropical fruits dispersed by megafauna (mammals .103 kg), yet these dispersers were extinct in South America 10–15 Kyr BP. Anachronic dispersal systems are best explained by interactions with extinct animals and show impaired dispersal resulting in altered seed dispersal dynamics. Methodology/Principal Findings: We introduce an operational definition of megafaunal fruits and perform a comparativ...

  11. Extinction threshold of a population in spatial and stochastic model

    OpenAIRE

    Soroka, Yevheniia; Rublyov, Bogdan

    2016-01-01

    In this study, spatial stochastic and logistic model (SSLM) describing dynamics of a population of a certain species was analysed. The behaviour of the extinction threshold as a function of model parameters was studied. More specifically, we studied how the critical values for the model parameters that separate the cases of extinction and persistence depend on the spatial scales of the competition and dispersal kernels. We compared the simulations and analytical results to examine if and how ...

  12. Flightless birds: When did the dodo become extinct?

    Science.gov (United States)

    Roberts, David L.; Solow, Andrew R.

    2003-11-01

    The extinction of the dodo (Raphus cucullatus L.; Fig. 1) is commonly dated to the last confirmed sighting in 1662, reported by Volkert Evertsz on an islet off Mauritius. By this time, the dodo had become extremely rare - the previous sighting having been 24 years earlier - but the species probably persisted unseen beyond this date. Here we use a statistical method to establish the actual extinction time of the dodo as 1690, almost 30 years after its most recent sighting.

  13. Many-beam electron extinction distances in zirconium

    International Nuclear Information System (INIS)

    Cann, C.D.

    1977-05-01

    Many-beam extinction distances have been calculated for twenty-two of the lowest order reflections in zirconium. Ten beams comprising the directly transmitted and the nine lowest order systematic reflections were included in each calculation. Extinction distances for each reflection were determined for electron accelerating voltages of 100 and 200 kV, both at the exact Bragg condition and at deviations up to two Bragg angles from this condition. (author)

  14. Deficient fear extinction memory in posttraumatic stress disorder.

    Science.gov (United States)

    Wicking, Manon; Steiger, Frauke; Nees, Frauke; Diener, Slawomira J; Grimm, Oliver; Ruttorf, Michaela; Schad, Lothar R; Winkelmann, Tobias; Wirtz, Gustav; Flor, Herta

    2016-12-01

    Posttraumatic stress disorder (PTSD) might be maintained by deficient extinction memory. We used a cued fear conditioning design with extinction and a post-extinction phase to provoke the return of fear and examined the role of the interplay of amygdala, hippocampus and prefrontal regions. We compared 18 PTSD patients with two healthy control groups: 18 trauma-exposed subjects without PTSD (nonPTSD) and 18 healthy controls (HC) without trauma experience. They underwent a three-day ABC-conditioning procedure in a functional magnetic resonance imaging scanner. Two geometric shapes that served as conditioned stimuli (CS) were presented in the context of virtual reality scenes. Electric painful stimuli were delivered after one of the two shapes (CS+) during acquisition (in context A), while the other (CS-) was never paired with pain. Extinction was performed in context B and extinction memory was tested in a novel context C. The PTSD patients showed significantly higher differential skin conductance responses than the non-PTSD and HC and higher differential amygdala and hippocampus activity than the HC in context C. In addition, elevated arousal to the CS+ during extinction and to the CS- throughout the experiment was present in the PTSD patients but self-reported differential valence or contingency were not different. During extinction recall, differential amygdala activity correlated positively with the intensity of numbing and ventromedial prefrontal cortex activity correlated positively with behavioral avoidance. PTSD patients show heightened return of fear in neural and peripheral measures. In addition, self-reported arousal was high to both danger (CS+) and safety (CS-) cues. These results suggest that a deficient maintenance of extinction and a failure to identify safety signals might contribute to PTSD symptoms, whereas non-PTSD subjects seem to show normal responses. Copyright © 2016 Elsevier Inc. All rights reserved.

  15. Global Amphibian Extinction Risk Assessment for the Panzootic Chytrid Fungus

    OpenAIRE

    Rödder, Dennis; Kielgast, Jos; Bielby, Jon; Schmidtlein, Sebastian; Bosch, Jaime; Garner, Trenton W. J.; Veith, Michael; Walker, Susan; Fisher, Matthew C.; Lötters, Stefan

    2009-01-01

    Species are being lost at increasing rates due to anthropogenic effects, leading to the recognition that we are witnessing the onset of a sixth mass extinction. Emerging infectious disease has been shown to increase species loss and any attempts to reduce extinction rates need to squarely confront this challenge. Here, we develop a procedure for identifying amphibian species that are most at risk from the effects of chytridiomycosis by combining spatial analyses of key host life-history varia...

  16. Profitless delays for extinction in nonautonomous Lotka-Volterra system

    Science.gov (United States)

    Liu, Shengqiang; Chen, Lansun

    2001-12-01

    We study the delayed periodic n-species Lotka-Voterra systems where the growth rate of each species is not always positive. The sufficient conditions for the extinction that are independent of the delays are obtained. Some known results are improved and generalized. Our results suggest that under some conditions, the introduction and the variance of the time delays can be both harmless and profitless. Discussion about the effect of time delays on the extinction of the system is also advanced.

  17. Ultraviolet extinction properties of grains in the interstellar medium

    International Nuclear Information System (INIS)

    Seab, C.G.

    1982-01-01

    The IUE satellite has been used to derive UV extinction curves for 58 stars, ranging in spectral type from 06 the A5, and with E(B-V) reddenings from 0.09 to 1.59 mag. The average reddening is 0.63 mag. Anomalous extinction curves were particularly sought in the project. The most striking discovery was the near absence of the 2175 Angstrom extinction feature from the line of sight towards HD 29647 in the Taurus dark cloud. The collection of data has been analyzed in several ways. Patterns are sought in the collection as a whole, in homogeneous subsets of the data, and in relation to diffuse band strengths. Apart from some well-known correlations, only a few weak relationships are found, including a quasi-relationship between the 2175 Angstrom bump and the 4430 Angstrom diffuse band that persists after the basic E(B-V) dependencies have been removed. A search for diffuse bands in the UV was done by stacking 48 of the extinction curves to reduce the noise. The stacked curve showed no evidence of new diffuse bands. To help interpret the anomalous extinction curves, a theoretical simulation of grain processing in interstellar shocks was undertaken. Shock processing was found to cause strong 2175 angstorm bumps and high far UV extinction. Comparison to extinction curves associated with supernova remnants confirms the predictions of strong 2175 Angstrom bumps, and partially confirms the prediction of high far UV extinction. The implications of all of these results are considered for the two most prominent grain models

  18. A fundamental role for context in instrumental learning and extinction

    OpenAIRE

    Bouton, Mark E.; Todd, Travis P.

    2014-01-01

    The purpose of this article is to review recent research that has investigated the effects of context change on instrumental (operant) learning. The first part of the article discusses instrumental extinction, in which the strength of a reinforced instrumental behavior declines when reinforcers are withdrawn. The results suggest that extinction of either simple or discriminated operant behavior is relatively specific to the context in which it is learned: As in prior studies of Pavlovian exti...

  19. How humans drive speciation as well as extinction

    DEFF Research Database (Denmark)

    Bull, Joseph William; Maron, M.

    2016-01-01

    influence upon divergence in microorganisms. Even if human activities resulted in no net loss of species diversity by balancing speciation and extinction rates, this would probably be deemed unacceptable. We discuss why, based upon ‘no net loss’ conservation literature— considering phylogenetic diversity...... and other metrics, risk aversion, taboo trade-offs and spatial heterogeneity. We conclude that evaluating speciation alongside extinction could result in more nuanced understanding of biosphere trends, clarifying what it is we actually value about biodiversity....

  20. Alcohol Ataxia Tolerance: Extinction Cues, Spontaneous Recovery, and Relapse

    OpenAIRE

    Brooks, Douglas C.

    2005-01-01

    This article reviews ethanol ataxic tolerance experiments with rats that investigate spontaneous recovery after extinction and how extinction-related cues reduce this recovery. Tolerance to the effects of many drugs including ethanol is partly the result of Pavlovian conditioning. Tolerance to the ataxic (and other) effects of ethanol depends critically upon the circumstances in which the drug is administered. Tolerance shows other characteristics common in Pavlovian conditioning, e.g.,. it c...