WorldWideScience

Sample records for expanded open-access database

  1. JASPAR 2010: the greatly expanded open-access database of transcription factor binding profiles

    DEFF Research Database (Denmark)

    Portales-Casamar, Elodie; Thongjuea, Supat; Kwon, Andrew T

    2009-01-01

    to an active research community. As binding models are refined by newer data, the JASPAR database now uses versioning of matrices: in this release, 12% of the older models were updated to improved versions. Classification of TF families has been improved by adopting a new DNA-binding domain nomenclature...

  2. Open access intrapartum CTG database.

    Science.gov (United States)

    Chudáček, Václav; Spilka, Jiří; Burša, Miroslav; Janků, Petr; Hruban, Lukáš; Huptych, Michal; Lhotská, Lenka

    2014-01-13

    Cardiotocography (CTG) is a monitoring of fetal heart rate and uterine contractions. Since 1960 it is routinely used by obstetricians to assess fetal well-being. Many attempts to introduce methods of automatic signal processing and evaluation have appeared during the last 20 years, however still no significant progress similar to that in the domain of adult heart rate variability, where open access databases are available (e.g. MIT-BIH), is visible. Based on a thorough review of the relevant publications, presented in this paper, the shortcomings of the current state are obvious. A lack of common ground for clinicians and technicians in the field hinders clinically usable progress. Our open access database of digital intrapartum cardiotocographic recordings aims to change that. The intrapartum CTG database consists in total of 552 intrapartum recordings, which were acquired between April 2010 and August 2012 at the obstetrics ward of the University Hospital in Brno, Czech Republic. All recordings were stored in electronic form in the OB TraceVue®;system. The recordings were selected from 9164 intrapartum recordings with clinical as well as technical considerations in mind. All recordings are at most 90 minutes long and start a maximum of 90 minutes before delivery. The time relation of CTG to delivery is known as well as the length of the second stage of labor which does not exceed 30 minutes. The majority of recordings (all but 46 cesarean sections) is - on purpose - from vaginal deliveries. All recordings have available biochemical markers as well as some more general clinical features. Full description of the database and reasoning behind selection of the parameters is presented in the paper. A new open-access CTG database is introduced which should give the research community common ground for comparison of results on reasonably large database. We anticipate that after reading the paper, the reader will understand the context of the field from clinical and

  3. Particle physicists want to expand open access

    CERN Multimedia

    Kaiser, Jocelyn

    2006-01-01

    "Particle physicists have come up with a novel way to promote free, immediate access to journal articles. Led by CERN, the gian lab near Geneva, Switzerland, they want to raise at least $6 million a year to begin buying open access to all published papers in their field." (1 page)

  4. Particle physicists want to expand open access

    CERN Multimedia

    Kaiser, Jocelyn

    2006-01-01

    "Particle physicists have come up with a novel way to promote free, immediate access to journal articles. Led by CERN, the giant lab near Geneva, Switzerland, thay want to raise at lesat $6 million a year to begin buying open access to all published papers in their field." (1/2 page)

  5. An open access thyroid ultrasound image database

    Science.gov (United States)

    Pedraza, Lina; Vargas, Carlos; Narváez, Fabián.; Durán, Oscar; Muñoz, Emma; Romero, Eduardo

    2015-01-01

    Computer aided diagnosis systems (CAD) have been developed to assist radiologists in the detection and diagnosis of abnormalities and a large number of pattern recognition techniques have been proposed to obtain a second opinion. Most of these strategies have been evaluated using different datasets making their performance incomparable. In this work, an open access database of thyroid ultrasound images is presented. The dataset consists of a set of B-mode Ultrasound images, including a complete annotation and diagnostic description of suspicious thyroid lesions by expert radiologists. Several types of lesions as thyroiditis, cystic nodules, adenomas and thyroid cancers were included while an accurate lesion delineation is provided in XML format. The diagnostic description of malignant lesions was confirmed by biopsy. The proposed new database is expected to be a resource for the community to assess different CAD systems.

  6. Urate levels predict survival in amyotrophic lateral sclerosis: Analysis of the expanded Pooled Resource Open-Access ALS clinical trials database.

    Science.gov (United States)

    Paganoni, Sabrina; Nicholson, Katharine; Chan, James; Shui, Amy; Schoenfeld, David; Sherman, Alexander; Berry, James; Cudkowicz, Merit; Atassi, Nazem

    2017-08-31

    Urate has been identified as a predictor of amyotrophic lateral sclerosis (ALS) survival in some but not all studies. Here we leverage the recent expansion of the Pooled Resource Open-Access ALS Clinical Trials (PRO-ACT) database to study the association between urate levels and ALS survival. Pooled data of 1,736 ALS participants from the PRO-ACT database were analyzed. Cox proportional hazards regression models were used to evaluate associations between urate levels at trial entry and survival. After adjustment for potential confounders (i.e., creatinine and body mass index), there was an 11% reduction in risk of reaching a survival endpoint during the study with each 1-mg/dL increase in uric acid levels (adjusted hazard ratio 0.89, 95% confidence interval 0.82-0.97, P ALS and confirms the utility of the PRO-ACT database as a powerful resource for ALS epidemiological research. Muscle Nerve 2017. © 2017 Wiley Periodicals, Inc.

  7. Starchive: The Open Access, Open Source Stellar Database

    Science.gov (United States)

    Tanner, A. M.; Muna, D.; Addison, B.; Zohrabi, F.; Geneser, C.; Niffenegger, R.

    2017-11-01

    It has become clear that we must understand the host stars as well as their exoplanets. The Starchive is an open source, open access stellar database and intuitive front-end to help astronomers find planets and determine habitability.

  8. Indexing Research Papers in Open Access Databases

    Directory of Open Access Journals (Sweden)

    Alexandra-Emilia Fortiş

    2009-01-01

    Full Text Available This paper synthesizes the actions performed in order to transform a classic scientific research journal – “Annals. Computer Science Series” – available only in printed form until 2008, into a modern e-journal with free access to the full text of the articles. For achieving this goal, the research papers have been included in various article databases, portals and library catalogs which offered a high visibility to the journal. Keywords: Open-Acces Initiative, article database, standards, meta-data harvesting

  9. JASPAR, the open access database of transcription factor-binding profiles: new content and tools in the 2008 update

    DEFF Research Database (Denmark)

    Bryne, J.C.; Valen, E.; Tang, M.H.E.

    2008-01-01

    JASPAR is a popular open-access database for matrix models describing DNA-binding preferences for transcription factors and other DNA patterns. With its third major release, JASPAR has been expanded and equipped with additional functions aimed at both casual and power users. The heart of the JASPAR...

  10. Open-access databases as unprecedented resources and drivers of cultural change in fisheries science

    Energy Technology Data Exchange (ETDEWEB)

    McManamay, Ryan A [ORNL; Utz, Ryan [National Ecological Observatory Network

    2014-01-01

    Open-access databases with utility in fisheries science have grown exponentially in quantity and scope over the past decade, with profound impacts to our discipline. The management, distillation, and sharing of an exponentially growing stream of open-access data represents several fundamental challenges in fisheries science. Many of the currently available open-access resources may not be universally known among fisheries scientists. We therefore introduce many national- and global-scale open-access databases with applications in fisheries science and provide an example of how they can be harnessed to perform valuable analyses without additional field efforts. We also discuss how the development, maintenance, and utilization of open-access data are likely to pose technical, financial, and educational challenges to fisheries scientists. Such cultural implications that will coincide with the rapidly increasing availability of free data should compel the American Fisheries Society to actively address these problems now to help ease the forthcoming cultural transition.

  11. JASPAR, the open access database of transcription factor-binding profiles: new content and tools in the 2008 update

    OpenAIRE

    Bryne, Jan Christian; Valen, Eivind; Tang, Man-Hung Eric; Marstrand, Troels; Winther, Ole; da Piedade, Isabelle; Krogh, Anders; Lenhard, Boris; Sandelin, Albin

    2007-01-01

    JASPAR is a popular open-access database for matrix models describing DNA-binding preferences for transcription factors and other DNA patterns. With its third major release, JASPAR has been expanded and equipped with additional functions aimed at both casual and power users. The heart of the JASPAR database—the JASPAR CORE sub-database—has increased by 12% in size, and three new specialized sub-databases have been added. New functions include clustering of matrix models by similarity, generat...

  12. Mars-Learning AN Open Access Educational Database

    Science.gov (United States)

    Kolankowski, S. M.; Fox, P. A.

    2016-12-01

    Schools across America have begun focusing more and more on science and technology, giving their students greater opportunities to learn about planetary science and engineering. With the development of rovers and advanced scientific instrumentation, we are learning about Mars' geologic history on a daily basis. These discoveries are crucial to our understanding of Earth and our solar system. By bringing these findings into the classroom, students can learn key concepts about Earth and Planetary sciences while focusing on a relevant current event. However, with an influx of readily accessible information, it is difficult for educators and students to find accurate and relevant material. Mars-Learning seeks to unify these discoveries and resources. This site will provide links to educational resources, software, and blogs with a focus on Mars. Activities will be grouped by grade for the middle and high school levels. Programs and software will be labeled, open access, free, or paid to ensure users have the proper tools to get the information they need. For new educators or those new to the subject, relevant blogs and pre-made lesson plans will be available so instructors can ensure their success. The expectation of Mars-Learning is to provide stress-free access to learning materials that falls within a wide range of curriculum. By providing a thorough and encompassing site, Mars-Learning hopes to further our understanding of the Red Planet and equip students with the knowledge and passion to continue this research.

  13. SciELO, Scientific Electronic Library Online, a Database of Open Access Journals

    Science.gov (United States)

    Meneghini, Rogerio

    2013-01-01

    This essay discusses SciELO, a scientific journal database operating in 14 countries. It covers over 1000 journals providing open access to full text and table sets of scientometrics data. In Brazil it is responsible for a collection of nearly 300 journals, selected along 15 years as the best Brazilian periodicals in natural and social sciences.…

  14. USING THE INTERNATIONAL SCIENTOMETRIC DATABASES OF OPEN ACCESS IN SCIENTIFIC RESEARCH

    Directory of Open Access Journals (Sweden)

    O. Galchevska

    2015-05-01

    Full Text Available In the article the problem of the use of international scientometric databases in research activities as web-oriented resources and services that are the means of publication and dissemination of research results is considered. Selection criteria of scientometric platforms of open access in conducting scientific researches (coverage Ukrainian scientific periodicals and publications, data accuracy, general characteristics of international scientometrics database, technical, functional characteristics and their indexes are emphasized. The review of the most popular scientometric databases of open access Google Scholar, Russian Scientific Citation Index (RSCI, Scholarometer, Index Copernicus (IC, Microsoft Academic Search is made. Advantages of usage of International Scientometrics database Google Scholar in conducting scientific researches and prospects of research that are in the separation of cloud information and analytical services of the system are determined.

  15. Toward an open-access global database for mapping, control, and surveillance of neglected tropical diseases

    DEFF Research Database (Denmark)

    Hürlimann, Eveline; Schur, Nadine; Boutsika, Konstantina

    2011-01-01

    for monitoring and evaluation. What is currently missing is a georeferenced global database for NTDs providing open-access to the available survey data that is constantly updated and can be utilized by researchers and disease control managers to support other relevant stakeholders. We describe the steps taken...... toward the development of such a database that can be employed for spatial disease risk modeling and control of NTDs....

  16. JASPAR, the open access database of transcription factor-binding profiles: new content and tools in the 2008 update.

    Science.gov (United States)

    Bryne, Jan Christian; Valen, Eivind; Tang, Man-Hung Eric; Marstrand, Troels; Winther, Ole; da Piedade, Isabelle; Krogh, Anders; Lenhard, Boris; Sandelin, Albin

    2008-01-01

    JASPAR is a popular open-access database for matrix models describing DNA-binding preferences for transcription factors and other DNA patterns. With its third major release, JASPAR has been expanded and equipped with additional functions aimed at both casual and power users. The heart of the JASPAR database-the JASPAR CORE sub-database-has increased by 12% in size, and three new specialized sub-databases have been added. New functions include clustering of matrix models by similarity, generation of random matrices by sampling from selected sets of existing models and a language-independent Web Service applications programming interface for matrix retrieval. JASPAR is available at http://jaspar.genereg.net.

  17. MalarImDB: an open-access literature-based malaria immunology database.

    Science.gov (United States)

    Deroost, Katrien; Opdenakker, Ghislain; Van den Steen, Philippe E

    2014-06-01

    The Malaria Immunology Database (MalarImDB, www.malarimdb.org) is a novel literature-based database of host mediators in blood-stage malaria. We designed this open-access online tool because intensive malaria research has resulted in a dazzling complexity of host mediators with pathogenic or protective functions. MalarImDB allows comparisons between expression levels in humans, expression levels in murine models, and functional data from experimental treatments in mice. The database is equipped with multiple search engines to retrieve information from many published studies. The search output is visualized schematically in tables, thereby revealing similarities and disparities. Thus, the primary aim of this database is to present a clear overview of the currently available data about malaria and to simplify literature searches. Copyright © 2014 Elsevier Ltd. All rights reserved.

  18. Expanding access to published research: open access and self-archiving.

    Science.gov (United States)

    Mower, Allyson; Youngkin, Mary E

    2008-03-01

    Academic libraries traditionally provide access to the life science journal literature for their respective institutions by purchasing annual subscriptions to journals. However, with skyrocketing subscription prices and decreased or flattened library budgets, fewer journals are being purchased. This trend results in diminished access to the literature for members of that institution. Open access and self-archiving are possible solutions to this crisis.

  19. For 481 biomedical open access journals, articles are not searchable in the Directory of Open Access Journals nor in conventional biomedical databases.

    Science.gov (United States)

    Liljekvist, Mads Svane; Andresen, Kristoffer; Pommergaard, Hans-Christian; Rosenberg, Jacob

    2015-01-01

    Background. Open access (OA) journals allows access to research papers free of charge to the reader. Traditionally, biomedical researchers use databases like MEDLINE and EMBASE to discover new advances. However, biomedical OA journals might not fulfill such databases' criteria, hindering dissemination. The Directory of Open Access Journals (DOAJ) is a database exclusively listing OA journals. The aim of this study was to investigate DOAJ's coverage of biomedical OA journals compared with the conventional biomedical databases. Methods. Information on all journals listed in four conventional biomedical databases (MEDLINE, PubMed Central, EMBASE and SCOPUS) and DOAJ were gathered. Journals were included if they were (1) actively publishing, (2) full OA, (3) prospectively indexed in one or more database, and (4) of biomedical subject. Impact factor and journal language were also collected. DOAJ was compared with conventional databases regarding the proportion of journals covered, along with their impact factor and publishing language. The proportion of journals with articles indexed by DOAJ was determined. Results. In total, 3,236 biomedical OA journals were included in the study. Of the included journals, 86.7% were listed in DOAJ. Combined, the conventional biomedical databases listed 75.0% of the journals; 18.7% in MEDLINE; 36.5% in PubMed Central; 51.5% in SCOPUS and 50.6% in EMBASE. Of the journals in DOAJ, 88.7% published in English and 20.6% had received impact factor for 2012 compared with 93.5% and 26.0%, respectively, for journals in the conventional biomedical databases. A subset of 51.1% and 48.5% of the journals in DOAJ had articles indexed from 2012 and 2013, respectively. Of journals exclusively listed in DOAJ, one journal had received an impact factor for 2012, and 59.6% of the journals had no content from 2013 indexed in DOAJ. Conclusions. DOAJ is the most complete registry of biomedical OA journals compared with five conventional biomedical databases

  20. For 481 biomedical open access journals, articles are not searchable in the Directory of Open Access Journals nor in conventional biomedical databases

    Directory of Open Access Journals (Sweden)

    Mads Svane Liljekvist

    2015-05-01

    Full Text Available Background. Open access (OA journals allows access to research papers free of charge to the reader. Traditionally, biomedical researchers use databases like MEDLINE and EMBASE to discover new advances. However, biomedical OA journals might not fulfill such databases’ criteria, hindering dissemination. The Directory of Open Access Journals (DOAJ is a database exclusively listing OA journals. The aim of this study was to investigate DOAJ’s coverage of biomedical OA journals compared with the conventional biomedical databases.Methods. Information on all journals listed in four conventional biomedical databases (MEDLINE, PubMed Central, EMBASE and SCOPUS and DOAJ were gathered. Journals were included if they were (1 actively publishing, (2 full OA, (3 prospectively indexed in one or more database, and (4 of biomedical subject. Impact factor and journal language were also collected. DOAJ was compared with conventional databases regarding the proportion of journals covered, along with their impact factor and publishing language. The proportion of journals with articles indexed by DOAJ was determined.Results. In total, 3,236 biomedical OA journals were included in the study. Of the included journals, 86.7% were listed in DOAJ. Combined, the conventional biomedical databases listed 75.0% of the journals; 18.7% in MEDLINE; 36.5% in PubMed Central; 51.5% in SCOPUS and 50.6% in EMBASE. Of the journals in DOAJ, 88.7% published in English and 20.6% had received impact factor for 2012 compared with 93.5% and 26.0%, respectively, for journals in the conventional biomedical databases. A subset of 51.1% and 48.5% of the journals in DOAJ had articles indexed from 2012 and 2013, respectively. Of journals exclusively listed in DOAJ, one journal had received an impact factor for 2012, and 59.6% of the journals had no content from 2013 indexed in DOAJ.Conclusions. DOAJ is the most complete registry of biomedical OA journals compared with five conventional

  1. SciELO, Scientific Electronic Library Online, a Database of Open Access Journals

    Directory of Open Access Journals (Sweden)

    Rogerio Meneghini

    2013-09-01

    Full Text Available   This essay discusses SciELO, a scientific journal database operating in 14 countries. It covers over 1000 journals providing open access to full text and table sets of scientometrics data. In Brazil it is responsible for a collection of nearly 300 journals, selected along 15 years as the best Brazilian periodicals in natural and social sciences. Nonetheless, they still are national journal in the sense that over 80% of the articles are published by Brazilian scientists. Important initiatives focused on professionalization and internationalization are considered to bring these journals to a higher level of quality and visibility. DOI: 10.18870/hlrc.v3i3.153

  2. MetaboLights: An Open-Access Database Repository for Metabolomics Data.

    Science.gov (United States)

    Kale, Namrata S; Haug, Kenneth; Conesa, Pablo; Jayseelan, Kalaivani; Moreno, Pablo; Rocca-Serra, Philippe; Nainala, Venkata Chandrasekhar; Spicer, Rachel A; Williams, Mark; Li, Xuefei; Salek, Reza M; Griffin, Julian L; Steinbeck, Christoph

    2016-03-24

    MetaboLights is the first general purpose, open-access database repository for cross-platform and cross-species metabolomics research at the European Bioinformatics Institute (EMBL-EBI). Based upon the open-source ISA framework, MetaboLights provides Metabolomics Standard Initiative (MSI) compliant metadata and raw experimental data associated with metabolomics experiments. Users can upload their study datasets into the MetaboLights Repository. These studies are then automatically assigned a stable and unique identifier (e.g., MTBLS1) that can be used for publication reference. The MetaboLights Reference Layer associates metabolites with metabolomics studies in the archive and is extensively annotated with data fields such as structural and chemical information, NMR and MS spectra, target species, metabolic pathways, and reactions. The database is manually curated with no specific release schedules. MetaboLights is also recommended by journals for metabolomics data deposition. This unit provides a guide to using MetaboLights, downloading experimental data, and depositing metabolomics datasets using user-friendly submission tools. Copyright © 2016 John Wiley & Sons, Inc.

  3. Genelab: Scientific Partnerships and an Open-Access Database to Maximize Usage of Omics Data from Space Biology Experiments

    Science.gov (United States)

    Reinsch, S. S.; Galazka, J..; Berrios, D. C; Chakravarty, K.; Fogle, H.; Lai, S.; Bokyo, V.; Timucin, L. R.; Tran, P.; Skidmore, M.

    2016-01-01

    NASA's mission includes expanding our understanding of biological systems to improve life on Earth and to enable long-duration human exploration of space. The GeneLab Data System (GLDS) is NASA's premier open-access omics data platform for biological experiments. GLDS houses standards-compliant, high-throughput sequencing and other omics data from spaceflight-relevant experiments. The GeneLab project at NASA-Ames Research Center is developing the database, and also partnering with spaceflight projects through sharing or augmentation of experiment samples to expand omics analyses on precious spaceflight samples. The partnerships ensure that the maximum amount of data is garnered from spaceflight experiments and made publically available as rapidly as possible via the GLDS. GLDS Version 1.0, went online in April 2015. Software updates and new data releases occur at least quarterly. As of October 2016, the GLDS contains 80 datasets and has search and download capabilities. Version 2.0 is slated for release in September of 2017 and will have expanded, integrated search capabilities leveraging other public omics databases (NCBI GEO, PRIDE, MG-RAST). Future versions in this multi-phase project will provide a collaborative platform for omics data analysis. Data from experiments that explore the biological effects of the spaceflight environment on a wide variety of model organisms are housed in the GLDS including data from rodents, invertebrates, plants and microbes. Human datasets are currently limited to those with anonymized data (e.g., from cultured cell lines). GeneLab ensures prompt release and open access to high-throughput genomics, transcriptomics, proteomics, and metabolomics data from spaceflight and ground-based simulations of microgravity, radiation or other space environment factors. The data are meticulously curated to assure that accurate experimental and sample processing metadata are included with each data set. GLDS download volumes indicate strong

  4. Respiratory cancer database: An open access database of respiratory cancer gene and miRNA.

    Science.gov (United States)

    Choubey, Jyotsna; Choudhari, Jyoti Kant; Patel, Ashish; Verma, Mukesh Kumar

    2017-01-01

    Respiratory cancer database (RespCanDB) is a genomic and proteomic database of cancer of respiratory organ. It also includes the information of medicinal plants used for the treatment of various respiratory cancers with structure of its active constituents as well as pharmacological and chemical information of drug associated with various respiratory cancers. Data in RespCanDB has been manually collected from published research article and from other databases. Data has been integrated using MySQL an object-relational database management system. MySQL manages all data in the back-end and provides commands to retrieve and store the data into the database. The web interface of database has been built in ASP. RespCanDB is expected to contribute to the understanding of scientific community regarding respiratory cancer biology as well as developments of new way of diagnosing and treating respiratory cancer. Currently, the database consist the oncogenomic information of lung cancer, laryngeal cancer, and nasopharyngeal cancer. Data for other cancers, such as oral and tracheal cancers, will be added in the near future. The URL of RespCanDB is http://ridb.subdic-bioinformatics-nitrr.in/.

  5. Open access

    NARCIS (Netherlands)

    Valkenburg, P.M.

    2015-01-01

    Open access week Van 19 tot en met 25 oktober 2015 vond wereldwijd de Open Access Week plaats. Tijdens deze week werden er over de hele wereld evenementen georganiseerd waar open access een rol speelt. Ook in Nederland zijn er diverse symposia, workshops en debatten georganiseerd zoals het debat in

  6. Asking new questions with old data: The Centralized Open-Access Rehabilitation database for Stroke (SCOAR.

    Directory of Open Access Journals (Sweden)

    Keith Lohse

    2016-09-01

    Full Text Available Background: This paper introduces a tool for streamlining data integration in rehabilitation science, the Centralized Open-Access Rehabilitation database for Stroke (SCOAR, which allows researchers to quickly visualize relationships among variables, efficiently share data, generate hypotheses, and enhance clinical trial design. Methods: Bibliographic databases were searched according to inclusion criteria leaving 2,892 titles that were further screened to 514 manuscripts to be screened by full text, leaving 215 randomized controlled trials in the database (489 independent groups representing 12,847 patients. Demographic, methodological, and statistical data were extracted by independent coders and entered into SCOAR. Results: Trial data came from 114 locations in 27 different countries and represented patients with a wide range of ages, 62 yr 41; 85, (shown as median range and at various stages of recovery following their stroke, 141 d 1; 3372. There was considerable variation in the dose of therapy that patients received, 20 h 0; 221, over interventions of different durations, 28 d 10; 365. There was also a lack of common data elements (CDEs across trials, but this lack of CDEs was most pronounced for baseline assessments of patient impairment and severity of stroke. Conclusions: Data integration across hundreds of RCTs allows clinicians and researchers to quickly visualize data from the history of the field and lays the foundation for making SCOAR a living database to which researchers can upload new data as trial results are published. SCOAR is a useful tool for clinicians and researchers that will facilitate data visualization, data sharing, the finding of relevant past studies, and the design of clinical trials by enabling more accurate and comprehensive power analyses. Furthermore, these data speak to the need for CDEs specific to stroke rehabilitation in randomized controlled trials.PROSPERO# CRD4201409010

  7. Respiratory cancer database: An open access database of respiratory cancer gene and miRNA

    Directory of Open Access Journals (Sweden)

    Jyotsna Choubey

    2017-01-01

    Results and Conclusions: RespCanDB is expected to contribute to the understanding of scientific community regarding respiratory cancer biology as well as developments of new way of diagnosing and treating respiratory cancer. Currently, the database consist the oncogenomic information of lung cancer, laryngeal cancer, and nasopharyngeal cancer. Data for other cancers, such as oral and tracheal cancers, will be added in the near future. The URL of RespCanDB is http://ridb.subdic-bioinformatics-nitrr.in/.

  8. JASPAR 2018: update of the open-access database of transcription factor binding profiles and its web framework.

    Science.gov (United States)

    Khan, Aziz; Fornes, Oriol; Stigliani, Arnaud; Gheorghe, Marius; Castro-Mondragon, Jaime A; van der Lee, Robin; Bessy, Adrien; Chèneby, Jeanne; Kulkarni, Shubhada R; Tan, Ge; Baranasic, Damir; Arenillas, David J; Sandelin, Albin; Vandepoele, Klaas; Lenhard, Boris; Ballester, Benoît; Wasserman, Wyeth W; Parcy, François; Mathelier, Anthony

    2017-11-13

    JASPAR (http://jaspar.genereg.net) is an open-access database of curated, non-redundant transcription factor (TF)-binding profiles stored as position frequency matrices (PFMs) and TF flexible models (TFFMs) for TFs across multiple species in six taxonomic groups. In the 2018 release of JASPAR, the CORE collection has been expanded with 322 new PFMs (60 for vertebrates and 262 for plants) and 33 PFMs were updated (24 for vertebrates, 8 for plants and 1 for insects). These new profiles represent a 30% expansion compared to the 2016 release. In addition, we have introduced 316 TFFMs (95 for vertebrates, 218 for plants and 3 for insects). This release incorporates clusters of similar PFMs in each taxon and each TF class per taxon. The JASPAR 2018 CORE vertebrate collection of PFMs was used to predict TF-binding sites in the human genome. The predictions are made available to the scientific community through a UCSC Genome Browser track data hub. Finally, this update comes with a new web framework with an interactive and responsive user-interface, along with new features. All the underlying data can be retrieved programmatically using a RESTful API and through the JASPAR 2018 R/Bioconductor package. © The Author(s) 2017. Published by Oxford University Press on behalf of Nucleic Acids Research.

  9. MINEs: open access databases of computationally predicted enzyme promiscuity products for untargeted metabolomics.

    Science.gov (United States)

    Jeffryes, James G; Colastani, Ricardo L; Elbadawi-Sidhu, Mona; Kind, Tobias; Niehaus, Thomas D; Broadbelt, Linda J; Hanson, Andrew D; Fiehn, Oliver; Tyo, Keith E J; Henry, Christopher S

    2015-01-01

    databases whose results include irrelevant synthetic compounds. Furthermore, MINEs complement and expand on previous in silico generated compound databases that focus on human metabolism. We are actively developing the database; future versions of this resource will incorporate transformation rules for spontaneous chemical reactions and more advanced filtering and prioritization of candidate structures. Graphical abstractMINE database construction and access methods. The process of constructing a MINE database from the curated source databases is depicted on the left. The methods for accessing the database are shown on the right.

  10. Open Access

    Science.gov (United States)

    Suber, Peter

    2012-01-01

    The Internet lets us share perfect copies of our work with a worldwide audience at virtually no cost. We take advantage of this revolutionary opportunity when we make our work "open access": digital, online, free of charge, and free of most copyright and licensing restrictions. Open access is made possible by the Internet and copyright-holder…

  11. Prevalence and Citation Advantage of Gold Open Access in the Subject Areas of the Scopus Database

    Science.gov (United States)

    Dorta-González, Pablo; Santana-Jiménez, Yolanda

    2018-01-01

    The potential benefit of open access (OA) in relation to citation impact has been discussed in the literature in depth. The methodology used to test the OA citation advantage includes comparing OA vs. non-OA journal impact factors and citations of OA vs. non-OA articles published in the same non-OA journals. However, one problem with many studies…

  12. Open access

    CERN Document Server

    Suber, Peter

    2012-01-01

    The Internet lets us share perfect copies of our work with a worldwide audience at virtually no cost. We take advantage of this revolutionary opportunity when we make our work "open access": digital, online, free of charge, and free of most copyright and licensing restrictions. Open access is made possible by the Internet and copyright-holder consent, and many authors, musicians, filmmakers, and other creators who depend on royalties are understandably unwilling to give their consent. But for 350 years, scholars have written peer-reviewed journal articles for impact, not for money, and are free to consent to open access without losing revenue. In this concise introduction, Peter Suber tells us what open access is and isn't, how it benefits authors and readers of research, how we pay for it, how it avoids copyright problems, how it has moved from the periphery to the mainstream, and what its future may hold. Distilling a decade of Suber's influential writing and thinking about open access, this is the indispe...

  13. For 481 biomedical open access journals, articles are not searchable in the Directory of Open Access Journals nor in conventional biomedical databases

    DEFF Research Database (Denmark)

    Liljekvist, Mads Svane; Andresen, Kristoffer; Pommergaard, Hans-Christian

    2015-01-01

    biomedical databases (MEDLINE, PubMed Central, EMBASE and SCOPUS) and DOAJ were gathered. Journals were included if they were (1) actively publishing, (2) full OA, (3) prospectively indexed in one or more database, and (4) of biomedical subject. Impact factor and journal language were also collected. DOAJ...... was compared with conventional databases regarding the proportion of journals covered, along with their impact factor and publishing language. The proportion of journals with articles indexed by DOAJ was determined. Results. In total, 3,236 biomedical OA journals were included in the study. Of the included...... journals, 86.7% were listed in DOAJ. Combined, the conventional biomedical databases listed 75.0% of the journals; 18.7% in MEDLINE; 36.5% in PubMed Central; 51.5% in SCOPUS and 50.6% in EMBASE. Of the journals in DOAJ, 88.7% published in English and 20.6% had received impact factor for 2012 compared...

  14. Editorial and scientific quality in the parameters for inclusion of journals commercial and open access databases

    Directory of Open Access Journals (Sweden)

    Cecilia Rozemblum

    2015-04-01

    Full Text Available In this article, the parameters used by RedALyC, Catalogo Latindex, SciELO, Scopus and Web of Science for the incorporation of scientific journals in their collections are analyzed with the goal of proving their relation with the objectives of each database in addition of debating the valuation that the scientific society is giving to those systems as decisive of "scientific quality". The used indicators are classified in: 1 Editorial quality (formal aspects or editorial management. 2 Content quality (peer review or originality and 3 Visibility (prestige of editors and editorial use and impact, accessibility and indexing It is revealed that: a between 9 and 16% of the indicators are related to the quality of content; b Lack specificity in their definition and determination of measure systems, and c match the goals of each base, although a marked trend towards formal aspects related and visibility is observed. Thus makes it clear that these systems pursuing their own objectives, making a core of journals of “quality” for its readership. We conclude, therefore, that the presence or absence of a journal in these collections is not sufficient to determine the quality of scientific magazine and its contents parameter.

  15. Support open access publishing

    DEFF Research Database (Denmark)

    Ekstrøm, Jeannette

    2013-01-01

    Projektet Support Open Access Publishing har til mål at få opdateret Sherpa/Romeo databasen (www.sherpa.ac.uk/romeo) med fagligt relevante, danske tidsskrifter. Projektet skal endvidere undersøge mulighederne for at få udviklet en database, hvor forskere på tværs af relevante tidsskriftsinformati...... tidsskriftsinformationer (faglig disciplin, BFI niveau, Impact Factor, Open Access) vil kunne danne sig et hurtigt overblik, for derved at kunne træffe et kvalificeret valg om, hvor og hvordan man skal publicere sine forskningsresultater....

  16. The virtual skeleton database: an open access repository for biomedical research and collaboration.

    Science.gov (United States)

    Kistler, Michael; Bonaretti, Serena; Pfahrer, Marcel; Niklaus, Roman; Büchler, Philippe

    2013-11-12

    Statistical shape models are widely used in biomedical research. They are routinely implemented for automatic image segmentation or object identification in medical images. In these fields, however, the acquisition of the large training datasets, required to develop these models, is usually a time-consuming process. Even after this effort, the collections of datasets are often lost or mishandled resulting in replication of work. To solve these problems, the Virtual Skeleton Database (VSD) is proposed as a centralized storage system where the data necessary to build statistical shape models can be stored and shared. The VSD provides an online repository system tailored to the needs of the medical research community. The processing of the most common image file types, a statistical shape model framework, and an ontology-based search provide the generic tools to store, exchange, and retrieve digital medical datasets. The hosted data are accessible to the community, and collaborative research catalyzes their productivity. To illustrate the need for an online repository for medical research, three exemplary projects of the VSD are presented: (1) an international collaboration to achieve improvement in cochlear surgery and implant optimization, (2) a population-based analysis of femoral fracture risk between genders, and (3) an online application developed for the evaluation and comparison of the segmentation of brain tumors. The VSD is a novel system for scientific collaboration for the medical image community with a data-centric concept and semantically driven search option for anatomical structures. The repository has been proven to be a useful tool for collaborative model building, as a resource for biomechanical population studies, or to enhance segmentation algorithms.

  17. R-Syst::diatom: an open-access and curated barcode database for diatoms and freshwater monitoring.

    Science.gov (United States)

    Rimet, Frédéric; Chaumeil, Philippe; Keck, François; Kermarrec, Lenaïg; Vasselon, Valentin; Kahlert, Maria; Franc, Alain; Bouchez, Agnès

    2016-01-01

    Diatoms are micro-algal indicators of freshwater pollution. Current standardized methodologies are based on microscopic determinations, which is time consuming and prone to identification uncertainties. The use of DNA-barcoding has been proposed as a way to avoid these flaws. Combining barcoding with next-generation sequencing enables collection of a large quantity of barcodes from natural samples. These barcodes are identified as certain diatom taxa by comparing the sequences to a reference barcoding library using algorithms. Proof of concept was recently demonstrated for synthetic and natural communities and underlined the importance of the quality of this reference library. We present an open-access and curated reference barcoding database for diatoms, called R-Syst::diatom, developed in the framework of R-Syst, the network of systematic supported by INRA (French National Institute for Agricultural Research), see http://www.rsyst.inra.fr/en. R-Syst::diatom links DNA-barcodes to their taxonomical identifications, and is dedicated to identify barcodes from natural samples. The data come from two sources, a culture collection of freshwater algae maintained in INRA in which new strains are regularly deposited and barcoded and from the NCBI (National Center for Biotechnology Information) nucleotide database. Two kinds of barcodes were chosen to support the database: 18S (18S ribosomal RNA) and rbcL (Ribulose-1,5-bisphosphate carboxylase/oxygenase), because of their efficiency. Data are curated using innovative (Declic) and classical bioinformatic tools (Blast, classical phylogenies) and up-to-date taxonomy (Catalogues and peer reviewed papers). Every 6 months R-Syst::diatom is updated. The database is available through the R-Syst microalgae website (http://www.rsyst.inra.fr/) and a platform dedicated to next-generation sequencing data analysis, virtual_BiodiversityL@b (https://galaxy-pgtp.pierroton.inra.fr/). We present here the content of the library regarding the

  18. Open Access and ORCID poster presentation

    DEFF Research Database (Denmark)

    Elbæk, Mikael Karstensen; Ekstrøm, Jeannette

    2014-01-01

    and related topics such as copyright, DTU Orbit, Open Access journals, APCs, Vouchers etc. ORCID ORCID – Open Research & Contributor ID – is an internationally recognized and widely used researcher-ID. ORCID makes it easy to reuse your data across disciplines, publishers and databases – all you need to do......Open Access Open Access is high on the agenda in Denmark and internationally. Denmark has announced a national strategy for Open Access that aims to achieve Open Access to 80% in 2017 and 100% in 2022 to peer review research articles. All public Danish funders as well as H2020 requires that all...... peer review articles that is an outcome of their funding will be Open Access. Uploading your full texts (your final author manuscript after review ) to DTU Orbit is a fundamental part of providing Open Access to your research. We are here to answer all your questions with regards to Open Access...

  19. Reasons to temper enthusiasm about open access nursing journals.

    Science.gov (United States)

    de Jong, Gideon

    2017-04-01

    Open access is a relatively new phenomenon within nursing science. Several papers from various nursing journals have been published recently on the disadvantages of the traditional model of purchasing proprietary fee-based databases to access scholarly information. Just few nursing scholars are less optimistic about the possible benefits of open access nursing journals. A critical reflection on the merits and pitfalls of open access journals along insights from the literature and personal opinion. Two arguments are discussed, providing justification for tempering enthusiasm about open access journals. First, only research groups with sufficient financial resources can publish in open access journals. Second, open access has conflicting incentives, where the aim is to expand production at the expense of publishing quality articles; a business model that fits well into a neoliberal discourse. There are valid reasons to criticise the traditional publishers for the excessive costs of a single article, therefore preventing the dissemination of scholarly nursing information. On the contrary, the business model of open access publishers is no less imbued with the neoliberal tendency of lining the pockets.

  20. Open Access @ DTU

    DEFF Research Database (Denmark)

    Ekstrøm, Jeannette

    Open Access is high on the agenda in Denmark and internationally. Denmark has announced a national strategy for Open Access that aims to achieve Open Access to 80% in 2017 and 100% in 2022 to peer review research articles. All public Danish funders as well as H2020 requires that all peer review...... articles that is an outcome of their funding will be Open Access. Uploading your full texts (your final author manuscript after review ) to DTU Orbit is a fundamental part of providing Open Access to your research. We are here to answer all your questions with regards to Open Access and related topics...... such as copyright, DTU Orbit, Open Access journals, APCs, Vouchers etc....

  1. Open Access Monitor - DK

    DEFF Research Database (Denmark)

    Svendsen, Michael; Hansen, Lars Asger Juel; Andersen, Dorte

    2017-01-01

    Open Access Monitor - DK (OAM-DK) is a 2-year DEFF funded [DEFF.2016-0018] national project running in 2017-2018 with the aim of collecting, documenting and administrating Open Access publishing costs. OAM-DK is lead by Copenhagen University Library under the Royal Danish Library with participation...... of all Danish University Libraries. This poster presents the first results of Open Access costs related to 2015 publications at the The University of Copenhagen....

  2. An open-access database of grape harvest dates for climate research: data description and quality assessment

    Directory of Open Access Journals (Sweden)

    V. Daux

    2012-09-01

    Full Text Available We present an open-access dataset of grape harvest dates (GHD series that has been compiled from international, French and Spanish literature and from unpublished documentary sources from public organizations and from wine-growers. As of June 2011, this GHD dataset comprises 380 series mainly from France (93% of the data as well as series from Switzerland, Italy, Spain and Luxemburg. The series have variable length (from 1 to 479 data, mean length of 45 data and contain gaps of variable sizes (mean ratio of observations/series length of 0.74. The longest and most complete ones are from Burgundy, Switzerland, Southern Rhône valley, Jura and Ile-de-France. The most ancient harvest date of the dataset is in 1354 in Burgundy.

    The GHD series were grouped into 27 regions according to their location, to geomorphological and geological criteria, and to past and present grape varieties. The GHD regional composite series (GHD-RCS were calculated and compared pairwise to assess their reliability assuming that series close to one another are highly correlated. Most of the pairwise correlations are significant (p-value < 0.001 and strong (mean pairwise correlation coefficient of 0.58. As expected, the correlations tend to be higher when the vineyards are closer. The highest correlation (R = 0.91 is obtained between the High Loire Valley and the Ile-de-France GHD-RCS.

    The strong dependence of the vine cycle on temperature and, therefore, the strong link between the harvest dates and the temperature of the growing season was also used to test the quality of the GHD series. The strongest correlations are obtained between the GHD-RCS and the temperature series of the nearest weather stations. Moreover, the GHD-RCS/temperature correlation maps show spatial patterns similar to temperature correlation maps. The stability of the correlations over time is explored. The most striking feature is their generalised deterioration at the

  3. The Open Access Divide

    Directory of Open Access Journals (Sweden)

    Jingfeng Xia

    2013-10-01

    Full Text Available This paper is an attempt to review various aspects of the open access divide regarding the difference between those academics who support free sharing of data and scholarly output and those academics who do not. It provides a structured description by adopting the Ws doctrines emphasizing such questions as who, what, when, where and why for information-gathering. Using measurable variables to define a common expression of the open access divide, this study collects aggregated data from existing open access as well as non-open access publications including journal articles and extensive reports. The definition of the open access divide is integrated into the discussion of scholarship on a larger scale.

  4. Item response theory analysis of the Amyotrophic Lateral Sclerosis Functional Rating Scale-Revised in the Pooled Resource Open-Access ALS Clinical Trials Database.

    Science.gov (United States)

    Bacci, Elizabeth D; Staniewska, Dorota; Coyne, Karin S; Boyer, Stacey; White, Leigh Ann; Zach, Neta; Cedarbaum, Jesse M

    2016-01-01

    Our objective was to examine dimensionality and item-level performance of the Amyotrophic Lateral Sclerosis Functional Rating Scale-Revised (ALSFRS-R) across time using classical and modern test theory approaches. Confirmatory factor analysis (CFA) and Item Response Theory (IRT) analyses were conducted using data from patients with amyotrophic lateral sclerosis (ALS) Pooled Resources Open-Access ALS Clinical Trials (PRO-ACT) database with complete ALSFRS-R data (n = 888) at three time-points (Time 0, Time 1 (6-months), Time 2 (1-year)). Results demonstrated that in this population of 888 patients, mean age was 54.6 years, 64.4% were male, and 93.7% were Caucasian. The CFA supported a 4* individual-domain structure (bulbar, gross motor, fine motor, and respiratory domains). IRT analysis within each domain revealed misfitting items and overlapping item response category thresholds at all time-points, particularly in the gross motor and respiratory domain items. Results indicate that many of the items of the ALSFRS-R may sub-optimally distinguish among varying levels of disability assessed by each domain, particularly in patients with less severe disability. Measure performance improved across time as patient disability severity increased. In conclusion, modifications to select ALSFRS-R items may improve the instrument's specificity to disability level and sensitivity to treatment effects.

  5. Information on Open Access

    African Journals Online (AJOL)

    It concerns the outputs that scholars normally give away free to be published – peer-reviewed journal articles, conference papers and datasets of various kinds." The three original, formal definitions of Open Access are the Budapest (2002), Bethesda (2003) and Berlin (2003) definitions and they are usually referred to as a ...

  6. Open access discount information

    International Development Research Centre (IDRC) Digital Library (Canada)

    Lauren Doyle

    www.springer.com/gp/open-access/authors- rights/self-archiving-policy/2124. Springer offers waivers and discounts for OA based on: 1) Low income economics (countries). 2) Low-Middle income economics (countries). Link to discount/waiver ...

  7. KAUST Open Access policy

    KAUST Repository

    Baessa, Mohamed A.

    2017-03-07

    The transition to open access (OA) is being driven by funders, libraries, researchers and publishers around the world, and is having an impact on us all. It is inevitable that different countries, organisations and disciplines are moving at different rates towards an OA model, and it is this that we will focus on in this session. Drawing on experiences from across Europe and the Middle East we will provide perspectives from both a global publisher and institutions based in the region. Taylor & Francis take a flexible, evidence-based approach to open access, providing a choice of publication routes for our authors, and a choice of agreements for our library customers. Carolyn will outline some of the open access developments, opportunities and challenges at Taylor & Francis. The library plays a critical role in facilitating open access for their researchers, from managing a repository to providing support and information on the OA publication process to their authors. Janis Tyhurst and Dr Imad Bachir will each give an overview of how this is being managed by their institution. There will be an opportunity for questions and discussion with the panel.

  8. Monographs and Open Access

    OpenAIRE

    Geoffrey Crossick

    2016-01-01

    This article presents the project that I led for HEFCE on the implications of OA (open access) for monographs and other long-form research publications. The likely requirement that books should be OA if submitted to the REF (Research Excellence Framework) after next means that OA development must be based on an understanding of the importance of the monograph in the AHSS (arts, humanities and social sciences) as well as the challenges involved in making the transition to online OA. The projec...

  9. Open-Access Publishing

    Directory of Open Access Journals (Sweden)

    Nedjeljko Frančula

    2013-06-01

    Full Text Available Nature, one of the most prominent scientific journals dedicated one of its issues to recent changes in scientific publishing (Vol. 495, Issue 7442, 27 March 2013. Its editors stressed that words technology and revolution are closely related when it comes to scientific publishing. In addition, the transformation of research publishing is not as much a revolution than an attrition war in which all sides are buried. The most important change they refer to is the open-access model in which an author or an institution pays in advance for publishing a paper in a journal, and the paper is then available to users on the Internet free of charge.According to preliminary results of a survey conducted among 23 000 scientists by the publisher of Nature, 45% of them believes all papers should be published in open access, but at the same time 22% of them would not allow the use of papers for commercial purposes. Attitudes toward open access vary according to scientific disciplines, leading the editors to conclude the revolution still does not suit everyone.

  10. ADOPT Open Access

    CERN Multimedia

    2007-01-01

    Are you writing a theoretical paper? An experimental one? Or one about instrumentation? You can publish it in Open Access. Now. Read how... You might have heard about Open Access, the next big thing in scientific publishing. The idea is to make the results of your (publicly funded) research free to read for everyone out there ... not only those lucky ones who work in places where libraries can afford to purchase the expensive subscriptions to scientific journals. CERN, DESY and other particle physics institutes have accepted an offer by one of the leading journals in High Energy Physics, JHEP: our libraries will pay a special subscription fee, and, in exchange, all articles with at least one author from our institutes will be published in Open Access. Anyone, anywhere and anytime will be able to read them, without any financial barrier! If you are writing an instrumentation paper, you can submit it to JINST and benefit from the same offer. This is a major step forward in the planned conversion of existi...

  11. Comunicazione e Open Access

    Directory of Open Access Journals (Sweden)

    Orazio Maria Valastro

    2005-06-01

    Full Text Available Il potenziale editoriale della rivista, sebbene compia appena il suo terzo anno di attività, è considerevole: basti pensare che la scelta fondante una parte del progetto editoriale, la pubblicazione di testi integrali, accessibili liberamente e gratuitamente su formato html, ha permesso l’accrescersi costante della consultazione delle pagine web pubblicate su internet e del numero dei visitatori che hanno avuto accesso agli articoli diffusi per ogni numero trimestrale. Condividendo e promuovendo i principi dell’Open-Access, il libero accesso al patrimonio culturale e scientifico, partecipando ad una comunicazione scientifica che favorisca una democratizzazione della conoscenza, si è inoltre indotto un valore aggiunto allo strumento editoriale: la valorizzazione della produzione scientifica e degli stessi contributi degli autori, insieme all’ampia divulgazione dei contenuti, liberamente accessibili da qualsiasi luogo del mondo tramite una connessione ad internet.

  12. Monographs and Open Access

    Directory of Open Access Journals (Sweden)

    Geoffrey Crossick

    2016-03-01

    Full Text Available This article presents the project that I led for HEFCE on the implications of OA (open access for monographs and other long-form research publications. The likely requirement that books should be OA if submitted to the REF (Research Excellence Framework after next means that OA development must be based on an understanding of the importance of the monograph in the AHSS (arts, humanities and social sciences as well as the challenges involved in making the transition to online OA. The project focused on three issues and each is summarized in turn in the article: What is the place of the monograph and other long-form publications in AHSS disciplines that makes it so important? What is happening to the monograph and is there a crisis as some suggest? What are the issues involved in moving monographs into a digital and OA environment – not just the challenge of effective business models but also many other aspects of sustaining and enhancing the qualities of the monograph? These include third-party rights, technical challenges, licences and the need for international collaboration.

  13. Open Access to Geophysical Data

    Science.gov (United States)

    Sergeyeva, Nataliya A.; Zabarinskaya, Ludmila P.

    2017-04-01

    Russian World Data Centers for Solar-Terrestrial Physics & Solid Earth Physics hosted by the Geophysical Center of the Russian Academy of Sciences are the Regular Members of the ICSU-World Data System. Guided by the principles of the WDS Constitution and WDS Data Sharing Principles, the WDCs provide full and open access to data, long-term data stewardship, compliance with agreed-upon data standards and conventions, and mechanisms to facilitate and improve access to data. Historical and current geophysical data on different media, in the form of digital data sets, analog records, collections of maps, descriptions are stored and collected in the Centers. The WDCs regularly fill up repositories and database with new data, support them up to date. Now the WDCs focus on four new projects, aimed at increase of data available in network by retrospective data collection and digital preservation of data; creation of a modern system of registration and publication of data with digital object identifier (DOI) assignment, and promotion of data citation culture; creation of databases instead of file system for more convenient access to data; participation in the WDS Metadata Catalogue and Data Portal by creating of metadata for information resources of WDCs.

  14. Digital Scholarship and Open Access

    Science.gov (United States)

    Losoff, Barbara; Pence, Harry E.

    2010-01-01

    Open access publications provide scholars with unrestricted access to the "conversation" that is the basis for the advancement of knowledge. The large number of open access journals, archives, and depositories already in existence demonstrates the technical and economic viability of providing unrestricted access to the literature that is the…

  15. Open Access Scholarly Publications as OER

    Directory of Open Access Journals (Sweden)

    Terry Anderson

    2013-06-01

    Full Text Available This paper presents the rationale, common practices, challenges, and some personal anecdotes from a journal editor on the production, use, and re-use of peer-reviewed scholarly articles as open educational resources (OER. The scholarly and professional discourse related to open educational resources has largely focused on open learning objects, courseware, and textbooks. However, especially in graduate education, articles published in scholarly journals are often a major component of the course content in formal education. In addition, open access journal articles are critical to expanding access to knowledge by scholars in the developing world and in fostering citizen science, by which everyone has access to the latest academic information and research results. In this article, I highlight some of the challenges, economic models, and evidence for quality of open access journal content and look at new affordances provided by the Net for enhanced functionality, access, and distribution.In the 17 years since I graduated with a doctorate degree, the climate and acceptance of open access publishing has almost reversed itself. I recall a conversation with my PhD supervisor in which he argued that publishing online was not a viable option as the product would not have permanency, scholarly recognition, or the prestige of a paper publication. His comments reflect the confusion between online resources and those described as open access, but as well illustrate the change in academic acceptance and use of open access products during the past decade. The evolution from paper to online production and consumption is a disruptive technology in which much lower cost and increased accessibility of online work opens the product to a completely new group of potential users. In the case of OER these consumers are primarily students, but certainly access to scholars from all parts of the globe and the availability to support citizen science (Silvertown, 2009

  16. SCOAP3 and Open Access

    CERN Document Server

    Mele, Salvatore; D'Agostino, Dan; Dyas-Correia, Sharon

    2009-01-01

    SCOAP3 is an innovative Open Access initiative for publishing in high-energy physics. The model is viewed by many as a potential solution to multiple issues related to the financial crisis, the peer review system, scholarly communication, and the need to support institutional repositories. This installment of “The Balance Point” presents articles written by three Open Access advocates, outlining the SCOAP3 proposal, benefits of participation, and some of the roles libraries, publishers and scientists can play in making important changes to scholarly communication. Contributors discuss scalability and transferability issues of SCOAP3, as well as other matters of concern.

  17. Open Access and Copyright 101

    OpenAIRE

    Young, Philip; McMillan, Gail

    2013-01-01

    In this FDI (Faculty Development Institute) class at Virginia Tech, the goal is for attendees to gain a better understanding of Open Access--unrestricted access to scholarship, increase their mastery of their copyrights, and learn how to take advantage of the Libraries' Subvention Fund and increase access to their work. University Libraries

  18. Publishing in Open Access Journals

    International Development Research Centre (IDRC) Digital Library (Canada)

    mbrunet

    reviewed and high quality, there are a number of questionable journals, i.e. journals that do not subscribe to most or any of the practices of legitimate, academic journals. There is no single rule or test to indicate whether an open access journal ...

  19. Estimating Open Access in NARCIS

    NARCIS (Netherlands)

    Bode, Emil; Braukmann, Ricarda; Doorn, P.K.

    2017-01-01

    This poster shows the state of open access in the Netherlands according to NARCIS, the national portal for information on Dutch science. The number of open and closed publications in NARCIS analysed, per type of publication, per year for PhD dissertations and articles, along with a percentage of OA

  20. Open Source Database and Website to Provide Free and Open Access to Inactive U.S. Patents in the Public Domain

    Directory of Open Access Journals (Sweden)

    Yuenyong Nilsiam

    2016-11-01

    Full Text Available Although theoretically the patent system is meant to bolster innovation, the current United States Patent and Trademark Office (USPTO is cumbersome and involves a significant time investment to locate inactive patents less than 20 years old. This article reports on the development of an open source database to find these public domain ideas. First, a search strategy is explained. Then the operation and use of free and open source software are detailed to meet the needs of open hardware innovators. Finally, a case study is presented to demonstrate the utility of the approach with 3-D printing. The results showed how the Free Inactive Patent Search enables users to search using plain language text to find public domain concepts and then provides a hyperlinked list of ideas that takes users to the USPTO database for the patent for more information. All of the source code to operate the search and the website are open source themselves and provided in the public domain for free. In the case study on 3-D printing the time to identify public domain patents was cut by a factor of more than 1500. This tool has the potential for accelerating the development of open hardware technologies to create high value for the public.

  1. RReACT goes global: perils and pitfalls of constructing a global open-access database of registered analgesic clinical trials and trial results.

    Science.gov (United States)

    Munch, Troels; Dufka, Faustine L; Greene, Kaitlin; Smith, Shannon M; Dworkin, Robert H; Rowbotham, Michael C

    2014-07-01

    Eliminating publication bias requires ensuring public awareness of studies and access to results. Clinical trial registries provide basic trial information, but access to unbiased trial results is inadequate. Nearly all studies of trial registration and results reporting have been limited to the ClinicalTrials.gov registry. We analyzed trial registration, registry functionality, cross-registry harmonization, and results reporting on all 15 primary registries in the World Health Organization International Clinical Trials Registry Platform (ICTRP) for postherpetic neuralgia, painful diabetic neuropathy, and fibromyalgia. A total of 447 unique trials were identified, with 86 trials listed on more than one registry. A comprehensive search algorithm was used to find trial results in the peer-reviewed literature and the grey literature. Creating a global database of registered trials and trial results proved surprisingly difficult for several reasons: (1) ICTRP does not reliably identify trials listed on multiple registries, manual searches are necessary; (2) Searching ICTRP yields different results than searching individual registries; (3) Outcome measure descriptions for multiply registered trials vary between registries; (4) Registry-publication pairings are often inaccurate or incomplete; (5) Grey literature results are not permanent. Overall, only 46% of all trials had results available. Trials registered on ClinicalTrials.gov were significantly more likely to have results (52% vs. 18%, Ptrial registration numbers on all meeting abstracts and peer-reviewed papers, specific strategies are offered to facilitate identifying multiply registered studies and ensuring accurate pairing of results and publications. Copyright © 2014 International Association for the Study of Pain. Published by Elsevier B.V. All rights reserved.

  2. Open access for REF2020

    Directory of Open Access Journals (Sweden)

    Simon Kerridge

    2014-03-01

    Full Text Available Open access (OA may have been the ‘big thing’ in 2013 but the OA juggernaut is still rolling and plans are now afoot for the requirements for the ‘next REF’ (which from now on we will refer to as REF2020. In 2013, on behalf of the four UK Funding Councils, the Higher Education Funding Council for England (HEFCE undertook a two-stage consultation exercise on open access requirements for articles submitted to REF2020. There are a number of nuances and caveats to the current proposals. This article will reflect on what the probable rules might be, and their implications for research managers, administrators and institutional repository managers alike.

  3. Alexander Street goes open access

    OpenAIRE

    Parker, David; Makowski, Jenna

    2016-01-01

    This article describes two complementary OA (open access) initiatives launching in 2016 at Alexander Street. Contributing Collections will see 10% of all revenue generated dedicated to digitizing and making OA important archives. Premium Services offer member libraries the opportunity to upload and make OA locally generated content. While this article focuses on the discipline of anthropology, Alexander Street will extend these two models into history, music and theater later in 2016. 

  4. Alexander Street goes open access

    Directory of Open Access Journals (Sweden)

    David Parker

    2016-03-01

    Full Text Available This article describes two complementary OA (open access initiatives launching in 2016 at Alexander Street. Contributing Collections will see 10% of all revenue generated dedicated to digitizing and making OA important archives. Premium Services offer member libraries the opportunity to upload and make OA locally generated content. While this article focuses on the discipline of anthropology, Alexander Street will extend these two models into history, music and theater later in 2016.

  5. Minerals, markets and open access

    OpenAIRE

    Mitchell, Clive

    2014-01-01

    Minerals, Markets and Open Access Clive Mitchell, Industrial Minerals Specialist, British Geological Survey, Nottingham, UK Email: The British Geological Survey (BGS) is a world-leading geological survey that focuses on public-good science for government and research to understand earth and environmental processes. The BGS is the UK provider of spatial and statistical minerals information, in addition it carries out research in areas such as metallogenesis, land-use im...

  6. Open Access Publishing with Drupal

    Directory of Open Access Journals (Sweden)

    Nina McHale

    2011-10-01

    Full Text Available In January 2009, the Colorado Association of Libraries (CAL suspended publication of its print quarterly journal, Colorado Libraries, as a cost-saving measure in a time of fiscal uncertainty. Printing and mailing the journal to its 1300 members cost CAL more than $26,000 per year. Publication of the journal was placed on an indefinite hiatus until the editorial staff proposed an online, open access format a year later. The benefits to migrating to open access included: significantly lower costs; a green platform; instant availability of content; a greater level of access to users with disabilities; and a higher level of visibility of the journal and the association. The editorial staff chose Drupal, including the E-journal module, and while Drupal is notorious for its steep learning curve—which exacerbated delays to content that had been created before the publishing hiatus—the fourth electronic issue was published recently at coloradolibrariesjournal.org. This article will discuss both the benefits and challenges of transitioning to an open access model and the choice Drupal as a platform over other more established journal software options.

  7. Support the Open Access Movement

    CERN Multimedia

    2005-01-01

    CERN's Executive Board recently endorsed a new policy of open access to the laboratory's results: Continuing CERN action on Open Access (OA) [http://cds.cern.ch/record/828991/files/open-2005-006.pdf]. What does this policy mean for you? CERN authors have two responsibilities: Submit your document to the CERN Document Server; Consider submitting future articles to an Open Access journal. Since 2001, Operational Circular No. 6 has required every CERN author (Staff member, Fellow, or any Associated member of personnel who is allowed to use CERN as his affiliation) to submit a copy of their scientific documents to the CERN Document Server (CDS). For some groups all approved documents are submitted by the secretary (see the Departments' policies at: http://library.cern.ch/cern_publications/cern_publication_policy.html). Each author should personally also ensure the submission of any other articles which are not added in this way, such as conference contributions and review articles. It is not sufficient to re...

  8. Types of Open Access Publishers in Scopus

    Directory of Open Access Journals (Sweden)

    David Solomon

    2013-05-01

    Full Text Available This study assessed characteristics of publishers who published 2010 open access (OA journals indexed in Scopus. Publishers were categorized into six types; professional, society, university, scholar/researcher, government, and other organizations. Type of publisher was broken down by number of journals/articles published in 2010, funding model, location, discipline and whether the journal was born or converted to OA. Universities and societies accounted for 50% of the journals and 43% of the articles published. Professional publisher accounted for a third of the journals and 42% of the articles. With the exception of professional and scholar/researcher publishers, most journals were originally subscription journals that made at least their digital version freely available. Arts, humanities and social science journals are largely published by societies and universities outside the major publishing countries. Professional OA publishing is most common in biomedicine, mathematics, the sciences and engineering. Approximately a quarter of the journals are hosted on national/international platforms, in Latin America, Eastern Europe and Asia largely published by universities and societies without the need for publishing fees. This type of collaboration between governments, universities and/or societies may be an effective means of expanding open access publications.

  9. Open Access Digital Repositories: An Indian Scenario

    OpenAIRE

    Loan, Fayaz Ahmad; Rather, Rafiq

    2007-01-01

    Open access digital Repositories give barrier-free access to literature for study and research to users worldwide. These repositories solve the pricing and permission crises for scholarly materials. This paper deals with open access repositories in India.

  10. Open Access, Megajournals, and MOOCs

    Directory of Open Access Journals (Sweden)

    Richard Wellen

    2013-10-01

    Full Text Available The development of “open” academic content has been strongly embraced and promoted by many advocates, analysts, stakeholders, and reformers in the sector of higher education and academic publishing. The two most well-known developments are open access scholarly publishing and Massive Online Open Courses (MOOCs, each of which are connected to disruptive innovations enabled by new technologies. Support for these new modes of exchanging knowledge is linked to the expectation that they will promote a number of public interest benefits, including widening the impact, productivity, and format of academic work; reforming higher education and scholarly publishing markets; and relieving some of the cost pressures in academia. This article examines the rapid emergence of policy initiatives in the United Kingdom and the United States to promote open content and to bring about a new relationship between the market and the academic commons. In doing so, I examine controversial forms of academic unbundling such as open access megajournals and MOOCs and place each in the context of the heightened emphasis on productivity and impact in new regulatory regimes in the area of higher education.

  11. Open Access og Den Bibliometriske Forskningsindikator

    DEFF Research Database (Denmark)

    Dorch, Bertil

    2011-01-01

    I sine "Anbefalinger til implementering af Open Access i Danmark" foreslår det nationale Open Access Udvalget blandet andet, at Den Bibliometriske Forskningsindikator (BFI) bør koordineres med en national Open Access-politik. I dette paper, der er baseret på et blogindlæg, fremfører forfatteren...... fire grunde til, hvorfor han synes det er en dårlig idé at koble Open Access til BFI....

  12. Open Access e-books come into play

    CERN Multimedia

    Tullio Basaglia

    2015-01-01

    According to the Directory of Open Access Journals, more than 10,000 journals are available on an open access (OA) basis. Building on this success, e-books are also now becoming available under this popular publishing scheme, proving that open access is steadily gaining momentum in scholarly scientific communication.   The economic model is largely inspired by well-established experience in the publishing of articles, and several publishers have expanded their OA programmes to include books. Today, negotiations with such publishers make it possible for books to be available with an appropriate licence, according to which the authors retain copyright while the content can be freely shared and reused, provided the author is credited appropriately. The introduction of e-books, in addition to expanding the diffusion of the written word and the relevant content, helps avoid the costs of the production and distribution of paper books that result in high prices for titles, making them accessible only to li...

  13. Open Access Publishing: What Authors Want

    Science.gov (United States)

    Nariani, Rajiv; Fernandez, Leila

    2012-01-01

    Campus-based open access author funds are being considered by many academic libraries as a way to support authors publishing in open access journals. Article processing fees for open access have been introduced recently by publishers and have not yet been widely accepted by authors. Few studies have surveyed authors on their reasons for publishing…

  14. Open access scholarly communication in Malaysia

    OpenAIRE

    Rhiza, Adni

    2011-01-01

    This paper reports on Open Access Scholarly Communication in Malaysia, investigating their use of open access repositories, advocacy undertaken, and reasons for contribution to global scholarship. The outcome wills very much in line with the stipulations willing Scholarly on Open access that will preserve and disseminate digital materials created by, or associated with the university.

  15. Open access journals and forensic publishing.

    Science.gov (United States)

    Knoll, James L

    2014-01-01

    Open access (OA) publishing makes articles available over the Internet at no charge. The OA movement had its official start in 2002 with the establishment of the Budapest Open Access Initiative. The goal of the OA movement is to remove access barriers, accelerate research, and thereby achieve its broader mission of promoting global welfare. The OA movement has made swift progress over the past decade, but has introduced a disruptive change into the scientific community. The early stages of OA publishing have raised strong apprehensions, such as reliability concerns and the emergence of so-called predatory journals. The OA initiative is both inspiring and unsettling. For the discipline of forensic psychiatry, research findings must be reliable enough to be proffered as testimony in court. The methods used by OA publishing make the resolution of the reliability problem somewhat unclear. Nevertheless, given the momentum of OA publishing, a substantial change in traditional publishing appears inevitable. The discipline of forensic psychiatry must keep abreast of this change and find innovative methods of preserving the integrity of the forensic science database. © 2014 American Academy of Psychiatry and the Law.

  16. Open Access Makes an Impact

    Directory of Open Access Journals (Sweden)

    Alexander Böker

    2013-07-01

    Full Text Available Polymers published its first issue in December 2009. At that time, the editorial board and publisher were determined to lead the journal to become another MDPI success story, proving that open access publishing and high quality publications, ensured by a rigorous peer-review procedure, followed by fast publication of accepted manuscripts can be achieved. Three and a half years later, after more than 153,000 article downloads in 2012, the journal received its first impact factor (2012 JCR IF: 1.687. Today, Polymers is proud to be the number one open access journal in the category of “Polymer Science”. In order to achieve this, we relied on an editorial board with well-known members from the polymer community, a professional staff and a vision that there is room alongside the established “high impact” journals for publishing science. Recently, the editor in chief of Science, Bruce Alberts, wrote an editorial [1] in favor of the San Francisco Declaration on Research Assessment (DORA, which states that the impact factor must not be used as “a surrogate measure of the quality of individual research articles [2]”. Even though the impact factor certainly is so far the best available measure of the quality of a journal and its impact on the scientific community, when it comes to the single manuscripts published, “there is still no other way to evaluate the quality of scientific papers, but to read them [3]”. Therefore, Polymers celebrates its first impact factor with an appropriate critical distance towards bibliometric data and feels encouraged to continue on the chosen path. With this in mind, I encourage you, our readers, to continuously evaluate the scientific quality of the articles published in Polymers by reading, discussing and citing them.

  17. Steady Impact Factor Growth for MDPI Open Access Journals

    Directory of Open Access Journals (Sweden)

    Alexander Thiesen

    2012-09-01

    Full Text Available For the past three years MDPI has announced the newly released impact factors for its Open Access journals by the means of an annual editorial [1–3]. In 2012 we are—once again—pleased to report that the growth of the impact factors of MDPI’s Open Access journals continues. This year’s edition of the Journal Citation Reports (JCR, which is published annually by Thomson Reuters, includes 10 journals published by MDPI, including three that have received their first official Impact Factors—International Journal of Environmental Research and Public Health (IJERPH, Materials and Nutrients. Table 1 reports the latest Impact Factors for 2011. Figure 1 graphically depicts the evolution of the Impact Factors for four MDPI open access journals that have received Impact Factors in the past. Table 2 reports the ranking of the MDPI journals within the subject categories of the Science Citation Index Expanded (SCIE.

  18. Worldwide open access: UK leadership?

    Directory of Open Access Journals (Sweden)

    Stevan Harnad

    2013-03-01

    Full Text Available The web is destined to become humankind's cognitive commons, where digital knowledge is jointly created and freely shared. The UK has been a leader in the global movement toward open access (OA to research but recently its leadership has been derailed by the joint influence of the publishing industry lobby from without and well-intentioned but premature and unhelpful over-reaching from within the OA movement itself. The result has been the extremely counterproductive ‘Finch Report’ followed by a new draft of the Research Councils UK (RCUK OA mandate, downgrading the role of cost-free OA self-archiving of research publications (‘green OA’ in favor of paying subscription publishers over and above subscriptions, out of scarce research funds, in exchange for making single articles OA (‘hybrid gold OA’. The motivation of the new policy is to reform publication and to gain certain re-use rights (CC-BY, but the likely effect would be researcher resistance, very little OA and a waste of research funds. There is still time to fix the RCUK mandate and restore the UK's leadership by taking a few very specific steps to clarify and strengthen the green component by adding a mechanism for monitoring and verifying compliance, with consequences for non-compliance, along lines also being adopted in the EC and the US.

  19. Perilous terra incognita--open-access journals.

    Science.gov (United States)

    Balon, Richard

    2014-04-01

    The author focuses on a new rapidly spreading practice of publication in open-access journals. The pros and cons of open-access journals are discussed. Publishing in these journals may be cost prohibitive for educators and junior faculty members. Some authors may be lured by the ease of publishing in open-access journals (and their, at times, inflated self-description, e.g., "international", "scientific"), and their possibly valuable contributions will escape the attention of Academic Psychiatry readership in the vast sea of open-access journals. The readership may be flooded with a large number of low-quality articles (maybe not even properly peer-reviewed) from open-access journals. It may take some time to sort out what is and what is not relevant and useful. Open-access publishing represents a problematic and controversial practice and may be associated with a conflict of interest for the editors and publishers of these journals.

  20. Open access: changing global science publishing.

    Science.gov (United States)

    Gasparyan, Armen Yuri; Ayvazyan, Lilit; Kitas, George D

    2013-08-01

    The article reflects on open access as a strategy of changing the quality of science communication globally. Successful examples of open-access journals are presented to highlight implications of archiving in open digital repositories for the quality and citability of research output. Advantages and downsides of gold, green, and hybrid models of open access operating in diverse scientific environments are described. It is assumed that open access is a global trend which influences the workflow in scholarly journals, changing their quality, credibility, and indexability.

  1. Open access to scientific publishing

    Directory of Open Access Journals (Sweden)

    Janne Beate Reitan

    2016-12-01

    Full Text Available Interest in open access (OA to scientific publications is steadily increasing, both in Norway and internationally. From the outset, FORMakademisk has been published as a digital journal, and it was one of the first to offer OA in Norway. We have since the beginning used Open Journal Systems (OJS as publishing software. OJS is part of the Public Knowledge Project (PKP, which was created by Canadian John Willinsky and colleagues at the Faculty of Education at the University of British Columbia in 1998. The first version of OJS came as an open source software in 2001. The programme is free for everyone to use and is part of a larger collective movement wherein knowledge is shared. When FORMakademisk started in 2008, we received much help from the journal Acta Didactic (n.d. at the University of Oslo, which had started the year before us. They had also translated the programme to Norwegian. From the start, we were able to publish in both Norwegian and English. Other journals have used FORMakademisk as a model and source of inspiration when starting or when converting from subscription-based print journals to electronic OA, including the Journal of Norwegian Media Researchers [Norsk medietidsskrift]. It is in this way that the movement around PKP works and continues to grow to provide free access to research. As the articles are OA, they are also easily accessible to non-scientists. We also emphasise that the language should be readily available, although it should maintain a high scientific quality. Often there may be two sides of the same coin. We on the editorial team are now looking forward to adopting the newly developed OJS 3 this spring, with many new features and an improved design for users, including authors, peer reviewers, editors and readers.

  2. World Summit embraces Open Access, libraries

    CERN Multimedia

    Kaser, D

    2004-01-01

    "The long-anticipated "first phase" meeting of the World Summit on the Information Society (WSIS), held in Geneva in December, was supposed to have been about equal access. It turned out being equally about open access as leading scientific organizations pushed their open-access initiative onto the World Summit agenda" (1 page)

  3. African Journals Online: Open Access Titles

    African Journals Online (AJOL)

    African Journal of Applied Zoology and Environmental Biology View Journal | Current Issue | Register This Journal is .... Issue | Register This Journal is Open Access. International Journal of Biological and Chemical Sciences ... Issue | Register This Journal is Open Access. Internet Journal of Medical Update - EJOURNAL

  4. E-Science and Open Access

    OpenAIRE

    Hey, Tony

    2005-01-01

    Berlin Declaration (2003) defines open access contributions as including: 'original scientific research results, raw data and metadata, source materials, digital representations of pictorial and graphical materials and scholarly multimedia material'. This talk is mainly concerned with open access to data. The purpose of the UK e-Science initiative is to allow scientists to do 'faster, better or different' research.

  5. Open Access and Civic Scientific Information Literacy

    Science.gov (United States)

    Zuccala, Alesia

    2010-01-01

    Introduction: We examine how residents and citizens of The Netherlands perceive open access to acquire preliminary insight into the role it might play in cultivating civic scientific literacy. Open access refers to scientific or scholarly research literature available on the Web to scholars and the general public in free online journals and…

  6. Open Access publicering på Metropol

    DEFF Research Database (Denmark)

    Azbi, Trine; Larsen, Bente; Møbjerg, Anna Christine Meinertz

    2016-01-01

    Resultater af en afdækning og analyse af Open Access (OA) publicering på Professionshøjskolen Metropol......Resultater af en afdækning og analyse af Open Access (OA) publicering på Professionshøjskolen Metropol...

  7. Open Access publicering på Metropol

    DEFF Research Database (Denmark)

    Azbi, Trine; Larsen, Bente; Møbjerg, Anna Christine Meinertz

    Resultater af en afdækning og analyse af Open Access (OA) publicering på Professionshøjskolen Metropol......Resultater af en afdækning og analyse af Open Access (OA) publicering på Professionshøjskolen Metropol...

  8. Open Access op de kaart gezet

    NARCIS (Netherlands)

    den Hollander, Franciscus

    Open Access, de vrije toegang tot wetenschappelijke informatie, wint terrein: informatie is in toenemende mate openbaar toegankelijk. Het Open Accessjaar 2009 werd op 2 februari van dit jaar afgesloten met een drukbezocht symposium in de Beurs van Berlage in Amsterdam. Dat Open Access nu echt op de

  9. Experimenteren met een Open Access Fonds

    NARCIS (Netherlands)

    De Leeuwe, J.; Versteeg, A.M.C.

    2012-01-01

    Om Open Access onder de eigen medewerkers te promoten, beschikt TU Delft over een Open Access Fonds. Wat heeft dit fonds de afgelopen jaren opgeleverd? Anke Versteeg en Just de Leeuwe bespreken de resultaten en belichten en passant ook nieuwe ontwikkelingen. Engelse versie is zonder tabellen en niet

  10. Open access: implications for library and information service delivery

    African Journals Online (AJOL)

    This paper describes Open Access (OA). It discusses two main forms of open access publishing such as open access archives and open access journals. It highlights open access as an initiative to facilitate North- South as well as South- North information flow. It presents benefits of Open access in library and information ...

  11. Achieving open access to conservation science.

    Science.gov (United States)

    Fuller, Richard A; Lee, Jasmine R; Watson, James E M

    2014-12-01

    Conservation science is a crisis discipline in which the results of scientific enquiry must be made available quickly to those implementing management. We assessed the extent to which scientific research published since the year 2000 in 20 conservation science journals is publicly available. Of the 19,207 papers published, 1,667 (8.68%) are freely downloadable from an official repository. Moreover, only 938 papers (4.88%) meet the standard definition of open access in which material can be freely reused providing attribution to the authors is given. This compares poorly with a comparable set of 20 evolutionary biology journals, where 31.93% of papers are freely downloadable and 7.49% are open access. Seventeen of the 20 conservation journals offer an open access option, but fewer than 5% of the papers are available through open access. The cost of accessing the full body of conservation science runs into tens of thousands of dollars per year for institutional subscribers, and many conservation practitioners cannot access pay-per-view science through their workplace. However, important initiatives such as Research4Life are making science available to organizations in developing countries. We urge authors of conservation science to pay for open access on a per-article basis or to choose publication in open access journals, taking care to ensure the license allows reuse for any purpose providing attribution is given. Currently, it would cost $51 million to make all conservation science published since 2000 freely available by paying the open access fees currently levied to authors. Publishers of conservation journals might consider more cost effective models for open access and conservation-oriented organizations running journals could consider a broader range of options for open access to nonmembers such as sponsorship of open access via membership fees. © 2014 The Authors. Conservation Biology published by Wiley Periodicals, Inc., on behalf of the Society for

  12. Open Access Policy for CERN Physics Publications

    CERN Multimedia

    2014-01-01

    CERN is committed to Open Access. It represents one of the values written in our Convention sixty years ago and is increasingly important for our Member States.   In the last edition of the Bulletin, this article described how CERN is doing with regards to open access publishing today. On Thursday this week, the Open Access Policy for CERN Physics Publications* was endorsed by the Scientific Information Policy Board (SIPB) and approved by the Director-General the same day . For any clarifications regarding the policy, please contact the Scientific Information Service library.desk@cern.ch. * A French version of the policy will be made available shortly.

  13. Open Access to essential health care information

    Directory of Open Access Journals (Sweden)

    Pandey Manoj

    2004-12-01

    Full Text Available Abstract Open Access publishing is a valuable resource for the synthesis and distribution of essential health care information. This article discusses the potential benefits of Open Access, specifically in terms of Low and Middle Income (LAMI countries in which there is currently a lack of informed health care providers – mainly a consequence of poor availability to information. We propose that without copyright restrictions, Open Access facilitates distribution of the most relevant research and health care information. Furthermore, we suggest that the technology and infrastructure that has been put in place for Open Access could be used to publish download-able manuals, guides or basic handbooks created by healthcare providers in LAMI countries.

  14. [Open access :an opportunity for biomedical research].

    Science.gov (United States)

    Duchange, Nathalie; Autard, Delphine; Pinhas, Nicole

    2008-01-01

    Open access within the scientific community depends on the scientific context and the practices of the field. In the biomedical domain, the communication of research results is characterised by the importance of the peer reviewing process, the existence of a hierarchy among journals and the transfer of copyright to the editor. Biomedical publishing has become a lucrative market and the growth of electronic journals has not helped lower the costs. Indeed, it is difficult for today's public institutions to gain access to all the scientific literature. Open access is thus imperative, as demonstrated through the positions taken by a growing number of research funding bodies, the development of open access journals and efforts made in promoting open archives. This article describes the setting up of an Inserm portal for publication in the context of the French national protocol for open-access self-archiving and in an international context.

  15. Open Access publishing in physics gains momentum

    CERN Multimedia

    2006-01-01

    The first meeting of European particle physics funding agencies took place on 3 November at CERN to establish a consortium for Open Access publishing in particle physics, SCOAP3 (Sponsoring Consortium for Open Access Publishing in Particle Physics). Open Access could transform the academic publishing world, with a great impact on research. The traditional model of research publication is funded through reader subscriptions. Open Access will turn this model on its head by changing the funding structure of research results, without increasing the overall cost of publishing. Instead of demanding payment from readers, publications will be distributed free of charge, financed by funding agencies via laboratories and the authors. This new concept will bring greater benefits and broaden opportunities for researchers and funding agencies by providing unrestricted distribution of the results of publicly funded research. The meeting marked a positive step forward, with international support from laboratories, fundin...

  16. Open access and scholarly communication, part 4

    CERN Document Server

    Eden, Brad

    2009-01-01

    This fourth e-book on the subject of open access in the academic field includes a Latin American case study on open access penetration, a paper from Germany on the promotion of OA illustrated by a project at the University of Konstanz, and a case study on OA at Bioline International, a non-profit scholarly publications aggregator, distributor, publisher and publishing assistance service.

  17. The ethics of open access publishing.

    Science.gov (United States)

    Parker, Michael

    2013-03-22

    Should those who work on ethics welcome or resist moves to open access publishing? This paper analyses arguments in favour and against the increasing requirement for open access publishing and considers their implications for bioethics research. In the context of biomedical science, major funders are increasingly mandating open access as a condition of funding and such moves are also common in other disciplines. Whilst there has been some debate about the implications of open-access for the social sciences and humanities, there has been little if any discussion about the implications of open access for ethics. This is surprising given both the central role of public reason and critique in ethics and the fact that many of the arguments made for and against open access have been couched in moral terms. In what follows I argue that those who work in ethics have a strong interest in supporting moves towards more open publishing approaches which have the potential both to inform and promote richer and more diverse forms of public deliberation and to be enriched by them. The importance of public deliberation in practical and applied ethics suggests that ethicists have a particular interest in the promotion of diverse and experimental forms of publication and debate and in supporting new, more creative and more participatory approaches to publication.

  18. Open Access Publishing - Strengths and Strategies

    Science.gov (United States)

    Rasmussen, Martin

    2010-05-01

    The journal crisis and the demand for free accessibility to the results of publicly funded research were the main drivers of the Open Access movement since the late 1990's. Besides many academic institutions that support the different ways of Open Access publishing, there is a growing number of publishing houses that are specialized on this new access and business model of scholarly literature. The lecture provides an overview of the different kinds of Open Access publishing, discusses the variety of underlying business models, names the advantages and potentials for researches and the public, and overcomes some objections against Open Access. Besides the increased visibility and information supply, the topic of copyrights and exploitation rights will be discussed. Furthermore, it is a central aim of the presentation to show that Open Access does not only support full peer-review, but also provides the potential for even enhanced quality assurance. The financing of business models based on open accessible literature is another important part to be outlined in the lecture.

  19. Open Access kortlægning 2011

    DEFF Research Database (Denmark)

    Elbæk, Mikael; Hansen, Tove Juul; Larsen, Asger V.

    Denne rapport viser, at det faglige domæne er en meget stærk faktor i forhold til, hvor stor en andel af forskningsoutputtet, der er open access. Rapporten viser, at der er forskelle mellem universiteterne som ikke alene kan forklares med faglige faktorer, men forklaringerne må findes andre steder......, det kunne være lokale procedurer, kultur eller strukturer (politikker). Dette tager rapporten dog ikke stilling til. Andelen af gylden open access ligger relativt stabilt på tværs af universiteterne, med en andel mellem 6 – 10 % af den samlede publicering i peer reviewede tidsskrifter. Dermed er grøn...... open access den væsentligste faktor som adskiller universiteternes samlede open access andel. Endvidere viser rapporten, at der er et meget stort uudnyttet open access potentiale på alle universiteterne. Faktisk kunne mere end 5.000 flere BFI-pointgivende artikler være open access, dvs. at 71 % af det...

  20. Open DOAR the Directory of Open Access Repositories

    CERN Multimedia

    CERN. Geneva

    2005-01-01

    The last year has seen wide-spread growth in the idea of using open access repositories as a part of a research institution's accepted infrastructure. Policy development from institutions and funding bodies has also supported the growth of the repository network. The next stage of expansion will be in the provision of services and cross-repository facilities and resources. Of course, it is hoped that these will then establish a feed-back loop to encourage repository population and further repository establishment, as the potential of open access to research materials is realised. The growth of repositories has been organic, with a variety of different repositories based in departments, institutions, funding agencies or subject communities, with a range of content, both in type and subject. Existing repositories are expanding their holdings, from eprints to associated research data-sets, or with learning objects and multimedia material. This presentation will look at the development of the Directory of Open Ac...

  1. Feasibility of using existing open access networks to support the harmonization of open access

    OpenAIRE

    Linde, Peter; Wessels, Bridgette; Smallwood, Rod; Price, Lada; Noorman, Merel; Wyatt, Sally; Sondervan, Jeroen

    2015-01-01

    In this report we identify and assess different options for bringing together and mobilizing relevant stakeholders in the open access arena. This builds on previous work done in the RECODE project about the open access stakeholder ecosystem, the barriers and the enablers for open access to research data as well as on the RECODE overarching policy recommendations set out in the RECODE work package 5. We have identified a sample of existing networks and organizations to determine whether they a...

  2. Open Access Publishing in Particle Physics

    CERN Document Server

    2007-01-01

    Particle Physics, often referred to as High Energy Physics (HEP), spearheaded the Open Access dissemination of scientific results with the mass mailing of preprints in the pre-Web era and with the launch of the arXiv preprint system at the dawn of the '90s. The HEP community is now ready for a further push to Open Access while retaining all the advantages of the peerreview system and, at the same time, bring the spiralling cost of journal subscriptions under control. I will present a plan for the conversion to Open Access of HEP peer-reviewed journals, through a consortium of HEP funding agencies, laboratories and libraries: SCOAP3 (Sponsoring Consortium for Open Access Publishing in Particle Physics). SCOAP3 will engage with scientific publishers towards building a sustainable model for Open Access publishing, which is as transparent as possible for HEP authors. The current system in which journals income comes from subscription fees is replaced with a scheme where SCOAP3 compensates publishers for the costs...

  3. Open Access and repositories beyond green and gold

    CERN Document Server

    2007-01-01

    Access to previous results and their reuse in new research are at the very basis of scientific progress. In the era of e-Science and when the Open Access paradigm is changing scholarly communication, there is an unprecedented need for rapid and effective online access to scientific information. High-Energy Physics (HEP) pioneered innovation in scholarly communication with the invention of the Web, originally a vehicle of scientific information, and with the inception of online preprint repositories, introducing Open Access to preliminary scientific results. With the imminent start-up of the CERN LHC accelerator, one of the flagships of European science, the HEP community urgently needs a new platform for scientific information. A multi-disciplinary collaboration of academies, research laboratories and industrial partners has developed a vision to build such an innovative e-infrastructure: HEPIS (High Energy Physics Information System). HEPIS will integrate present European and American databases and repositor...

  4. [The publishing industry against open access journals].

    Science.gov (United States)

    Camargo Junior, Kenneth Rochel de

    2012-12-01

    Open-access journal publishing has significantly grown in recent years. Restricted access publications have, in turn, increasing access costs as they benefit from a unique economic model in which relevant work and essential inputs are provided free of charge to vendors who have a captive market that has almost no competition. An additional issue typical of industries that work under the copyright regime is that the oligopoly market structure of the publishing industry which in turn further contributes to increase their products' prices. Mandatory open-access policies, as determined by the NIH, constitute a threat to this business model and are being challenged by the industry on several fronts, including the passage of legislation to undermine these initiatives. The purpose of this commentary article was to review key aspects of this confrontation and to suggest potential strategies for encouraging open-access publishing in Brazil.

  5. Open Access: Current Status, AAS Perspectives

    Science.gov (United States)

    Marvel, Kevin B.; Biemesderfer, Chris

    Open Access, defined as the free provision of information by science publishers, is not likely to be mandated by law anytime soon in the United States. A collaborative effort, initiated by the House Science Committee, to come to some consensus within the scientific publishing enterprise has resulted in the release of the so-called "Roundtable Recommendations". These will serve as a working model moving forward on fundamental shared starting points for both publishers and authors as well as the Open Access community. The AAS' delayed open access model for publishing is flexible, supportive of our discipline and equitably distributes the cost of publishing to authors and readers. The AAS can support this flexible model because it is not dependent on journal revenues for the support of its member-focused activities.

  6. Quality open access publishing and registration to Directory of Open Access Journals

    Directory of Open Access Journals (Sweden)

    Xin Bi

    2017-02-01

    Full Text Available With the fast development of open access publishing worldwide, Directory of Open Access Journals (DOAJ as a community-curated online directory that indexes and provides access to high quality, open access, peer-reviewed journals, has been recognized for its high criteria in facilitating high quality open access scholarly publishing and used as the portal for accessing quality open access journals. While the numbers of journal application to be inclusion in DOAJ in Asia are kept increasing dramatically, many editors of these journals are not very clear about the idea or concept of the open access which have been embedded in the application form containing 58 questions falling into several different criteria categories. The very commonly seen misunderstanding of the required item, inaccurate or vague or incomplete and even missing information, poorly organized website, non-transparent process of publishing, especially no open access statement and copyright statement, or conflicts between the policy statements would cause much more communication between the reviewer and the editor and delay the completion of the review. This article gives an in depth introduction to DOAJ criteria and detailed introduction to the general process on how to register to DOAJ, suggestions based on application review also is given for journal editors to better prepare for this application. And it is the most important for editors to keep in mind that to be indexed by DOAJ is not just about filling a form, it is about truly change and adapt to best practices in open access publishing.

  7. Presentation of the paper “Open access repositories as channel of publication scientific grey literature”

    OpenAIRE

    Ferreras Fernández, Tránsito; García-Peñalvo, Francisco José; Merlo Vega, José Antonio

    2015-01-01

    This is the presentation of the paper entitled “Open access repositories as channel of publication scientific grey literature” in the TEEM 2015 International Conference held in Porto (Portugal) in October 7-9, 2015. In this paper we describe how the open access repositories are valid channels for the publication of scientific grey literature. Technological development facilitates the communication of scientific knowledge, allowing expand distribution channels and significantly reducing tra...

  8. Rebates List for Open Access Information

    International Development Research Centre (IDRC) Digital Library (Canada)

    Lauren Doyle

    www.springer.com/gp/open-access/authors- rights/self-archiving-policy/2124. Springer offers waivers and discounts for OA based on: 1) Low income economics (countries). 2) Low-Middle income economics (countries). Link to discount/waiver ...

  9. Continuing CERN action on Open Access

    CERN Document Server

    CERN. Geneva. Scientific Information Policy Board

    2005-01-01

    Open Access (OA) is an idea that would change the publishing landscape to bring benefits to all readers and authors. New publishing models based on electronic dissemination and OA are emerging. Active measures taken by CERN at this time could have an important impact on the wider adoption of OA principles.

  10. Open Access for International Criminal Lawyers

    NARCIS (Netherlands)

    van Laer, Coen

    2016-01-01

    This study investigates to what extent Open Access is useful for international criminal lawyers. Free reuse and distribution may be particularly advantageous for the audience in less resourceful countries. And individual authors need visibility to promote their academic reputation. However, many

  11. COMMUNITY RATING AND OPEN ACCESS - GOOD INTENTIONS ...

    African Journals Online (AJOL)

    hat ack. COMMUNITY RATING AND OPEN. ACCESS - GOOD INTENTIONS,. BAD IDEAS. Andrew Sykes. Andrew Sykes (BSc, Actuarial Science), started offat the achwrial department ofthe Swiss SA. Reinsurance Company, advising 011 life and health insurance and particularly on product design, clinical aspects, pricing, ...

  12. Publishing in Open Access Education Journals: The Authors' Perspectives

    Science.gov (United States)

    Coonin, Bryna; Younce, Leigh M.

    2010-01-01

    Open access publishing is now an accepted method of scholarly communication. However, the greatest traction for open access publishing thus far has been in the sciences. Penetration of open access publishing has been much slower among the social sciences. This study surveys 309 authors from recent issues of open access journals in education to…

  13. Usage Trends of Open Access and Local Journals: A Korean Case Study.

    Science.gov (United States)

    Seo, Jeong-Wook; Chung, Hosik; Yun, Jungmin; Park, Jin Young; Park, Eunsun; Ahn, Yuri

    2016-01-01

    Articles from open access and local journals are important resources for research in Korea and the usage trends of these articles are important indicators for the assessment of the current research practice. We analyzed an institutional collection of published papers from 1998 to 2014 authored by researchers from Seoul National University, and their references from papers published between 1998 and 2011. The published papers were collected from Web of Science or Scopus and were analyzed according to the proportion of articles from open access journals. Their cited references from published papers in Web of Science were analyzed according to the proportion of local (South Korean) or open access journals. The proportion of open access papers was relatively stable until 2006 (2.5 ~ 5.2% in Web of Science and 2.7 ~ 4.2% in Scopus), but then increased to 15.9% (Web of Science) or 18.5% (Scopus) in 2014. We analyzed 2,750,485 cited references from 52,295 published papers. We found that the overall proportion of cited articles from local journals was 1.8% and that for open access journals was 3.0%. Citations of open access articles have increased since 2006 to 4.1% in 2011, although the increase in open access article citations was less than for open access publications. The proportion of citations from local journals was even lower. We think that the publishing / citing mismatch is a term to describe this difference, which is an issue at Seoul National University, where the number of published papers at open access or local journals is increasing but the number of citations is not. The cause of this discrepancy is multi-factorial but the governmental / institutional policies, social / cultural issues and authors' citing behaviors will explain the mismatch. However, additional measures are also necessary, such as the development of an institutional citation database and improved search capabilities with respect to local and open access documents.

  14. Usage Trends of Open Access and Local Journals: A Korean Case Study.

    Directory of Open Access Journals (Sweden)

    Jeong-Wook Seo

    Full Text Available Articles from open access and local journals are important resources for research in Korea and the usage trends of these articles are important indicators for the assessment of the current research practice. We analyzed an institutional collection of published papers from 1998 to 2014 authored by researchers from Seoul National University, and their references from papers published between 1998 and 2011. The published papers were collected from Web of Science or Scopus and were analyzed according to the proportion of articles from open access journals. Their cited references from published papers in Web of Science were analyzed according to the proportion of local (South Korean or open access journals. The proportion of open access papers was relatively stable until 2006 (2.5 ~ 5.2% in Web of Science and 2.7 ~ 4.2% in Scopus, but then increased to 15.9% (Web of Science or 18.5% (Scopus in 2014. We analyzed 2,750,485 cited references from 52,295 published papers. We found that the overall proportion of cited articles from local journals was 1.8% and that for open access journals was 3.0%. Citations of open access articles have increased since 2006 to 4.1% in 2011, although the increase in open access article citations was less than for open access publications. The proportion of citations from local journals was even lower. We think that the publishing / citing mismatch is a term to describe this difference, which is an issue at Seoul National University, where the number of published papers at open access or local journals is increasing but the number of citations is not. The cause of this discrepancy is multi-factorial but the governmental / institutional policies, social / cultural issues and authors' citing behaviors will explain the mismatch. However, additional measures are also necessary, such as the development of an institutional citation database and improved search capabilities with respect to local and open access documents.

  15. Publishing in open access era: focus on respiratory journals.

    Science.gov (United States)

    Dai, Ni; Xu, Dingyao; Zhong, Xiyao; Li, Li; Ling, Qibo; Bu, Zhaode

    2014-05-01

    We have entered an open access publishing era. The impact and significance of open access is still under debate after two decades of evolution. Open access journals benefit researchers and the general public by promoting visibility, sharing and communicating. Non-mainstream journals should turn the challenge of open access into opportunity of presenting best research articles to the global readership. Open access journals need to optimize their business models to promote the healthy and continuous development.

  16. EXPANDING ACADEMIC VOCABULARY WITH AN INTERACTIVE ON-LINE DATABASE

    Directory of Open Access Journals (Sweden)

    Marlise Horst

    2005-05-01

    Full Text Available University students used a set of existing and purpose-built on-line tools for vocabulary learning in an experimental ESL course. The resources included concordance, dictionary, cloze-builder, hypertext, and a database with interactive self-quizzing feature (all freely available at www.lextutor.ca. The vocabulary targeted for learning consisted of (a Coxhead's (2000 Academic Word List, a list of items that occur frequently in university textbooks, and (b unfamiliar words students had met in academic texts and selected for entry into the class database. The suite of tools were designed to foster retention by engaging learners in deep processing, an aspect that is often described as missing in computer exercises for vocabulary learning. Database entries were examined to determine whether context sentences supported word meanings adequately and whether entered words reflected the unavailability of cognates in the various first languages of the participants. Pre- and post-treatment performance on tests of knowledge of words targeted for learning in the course were compared to establish learning gains. Regression analyses investigated connections between use of specific computer tools and gains.

  17. Open Access publishing in physics gains momentum

    CERN Multimedia

    2006-01-01

    "As if inventing the World-Wide Web were not revolutionary enough, the European Organisation for Nuclear Research (CERN) is now on its way to unleashing a paradigm shift in the world of academic publishing. For the first time ever, an entire scientific field is exploring the possibility of converting its reader-paid journals into an author-pai Open Access format." (1 page)

  18. Do open access data policies inhibit innovation?

    Science.gov (United States)

    Katzner, Todd E.

    2015-01-01

    There has been a great deal of attention paid recently to the idea of data sharing (Van Noorden 2014, Beardsley 2015, Nature Publishing Group2015, www.copdess.com). However, the vast majority of these arguments are in agreement and present as fait accompli the idea that data are a public good and that therefore, once published, they should become open access. In fact, although there are many good reasons for data sharing, there also are a number of cogent and coherent cases to be made against open-access policies (e.g., Fenichel and Skelly 2015). The goal of this piece is not to debate the relevance or accuracy of the points made in favor of data sharing but to elevate the discussion by pointing out key problems with open-access policies and to identify central issues that, if solved, will enhance the utility of data sharing to science and society.

  19. Keeping open access to education and learning

    Directory of Open Access Journals (Sweden)

    Ana Krajnc

    2008-12-01

    Full Text Available Open Access to Education is a basic paradigm of the information society. Selective education system, competitiveness and collecting points disqualifies part of the generation, restricts access to education, therefore works against developments and conditions of the society, Education is no longer a privilege of the elite, but rather a common good. Developments and vitality of the society depend on the level of population development. Intellectual elite does not suffice anymore, since the work and life have become more demanding for everybody. Development of human capital requires open access to education using formal and informal ways. Information technology along with communication technology open access to knowledge to everybody. Research shows that the use of internet in Slovenia overcomes the state of the developed human capital and learning programs to be centralized and offers different possibilities for learning. Regions are becoming equal to centers. A man needs at least to finish a four-year secondary school to be able to join in. There are hardly any functionally illiterate of those using e-learning. People, who e-learn depend on their own personal motivation to do so. There's no teacher. A person decides himself and runs the learning process and in turn receives endless learning possibilities. He or she can access the treasury of the world, which is an important achievement of the globalization.

  20. CERN Confirms commitment to Open Access

    CERN Multimedia

    2005-01-01

    The CERN Library Information desk.At a meeting on the Wednesday before Easter, the Executive Committee endorsed a policy of open access to all the laboratory's results, as expressed in the document ‘Continuing CERN action on Open Access' (http://cds.cern.ch/record/828991/files/open-2005-006.pdf), released by its Scientific Information Policy Board (SIPB) earlier in the month. "This underlines CERN's commitment to sharing the excitement of fundamental research with as wide an audience as possible", said Guido Altarelli, current SIPB chairman. Open Access to scientific knowledge is today the goal of an increasing component of the worldwide scientific community. It is a concept, made possible by new electronic tools, which would bring enormous benefits to all readers by giving them free access to research results. CERN has implicitly supported such moves from its very beginning. Its Convention (http://cds.cern.ch/record/330625/files/cm-p00046871.pdf), adopted in 1953, requires openness, stipulating that "......

  1. Open access journals – what publishers offer, what researchers want

    CERN Document Server

    Dallmeier-Tiessen, Suenje; Goerner, Bettina; Hyppoelae, Jenni; Igo-Kemenes, Peter; Kahn, Deborah; Lamber, Simon; Lengenfelder, Anja; Leonard, Chris; Mele, Salvatore; Nowicka, Malgorzata; Polydoratou, Panayiota; Ross, David; Ruiz-Perez, Sergio; Schimmer, Ralf; Swaisland, Mark; van der Stelt, Wim

    2011-01-01

    The SOAP (Study of Open Access Publishing) project has analyzed the current supply and demand situation in the open access journal landscape. Starting from the Directory of Open Access Journals, several sources of data were considered, including journal websites and direct inquiries within the publishing industry to comprehensively map the present supply of online peer-reviewed OA journals. The demand for open access publishing is summarised, as assessed through a large-scale survey of researchers' opinions and attitudes. Some forty thousand answers were collected across disciplines and around the world, reflecting major support for the idea of open access, while highlighting drivers of and barriers to open access publishing.

  2. Open Access in Turkey and Comparison with Other Countries

    Directory of Open Access Journals (Sweden)

    Bülent Karasözen

    2010-06-01

    Full Text Available The number of open access journals and institutional repositories, as a product of open access movement has grown rapidly in recent years. Open access research articles remove the barriers in accessing scientific research results and accelerate the communication among the scientist worldwide. In many countries the number of institutional archives and open access journal are increasing. In this article, the recent developments in open access journals, institutional repositories and open courseware in Turkey are summarized and compared with some countries. A sample mandatory institutional repository policy document is given with some suggestion for establishing open access in Turkey.

  3. Achieving Open Access to Conservation Science

    Science.gov (United States)

    Fuller, Richard A; Lee, Jasmine R; Watson, James E M

    2014-01-01

    Conservation science is a crisis discipline in which the results of scientific enquiry must be made available quickly to those implementing management. We assessed the extent to which scientific research published since the year 2000 in 20 conservation science journals is publicly available. Of the 19,207 papers published, 1,667 (8.68%) are freely downloadable from an official repository. Moreover, only 938 papers (4.88%) meet the standard definition of open access in which material can be freely reused providing attribution to the authors is given. This compares poorly with a comparable set of 20 evolutionary biology journals, where 31.93% of papers are freely downloadable and 7.49% are open access. Seventeen of the 20 conservation journals offer an open access option, but fewer than 5% of the papers are available through open access. The cost of accessing the full body of conservation science runs into tens of thousands of dollars per year for institutional subscribers, and many conservation practitioners cannot access pay-per-view science through their workplace. However, important initiatives such as Research4Life are making science available to organizations in developing countries. We urge authors of conservation science to pay for open access on a per-article basis or to choose publication in open access journals, taking care to ensure the license allows reuse for any purpose providing attribution is given. Currently, it would cost $51 million to make all conservation science published since 2000 freely available by paying the open access fees currently levied to authors. Publishers of conservation journals might consider more cost effective models for open access and conservation-oriented organizations running journals could consider a broader range of options for open access to nonmembers such as sponsorship of open access via membership fees. Obtención de Acceso Abierto a la Ciencia de la Conservación Resumen La ciencia de la conservación es una

  4. Open access in the world and Latin America: A review since the Budapest Open Access Initiative

    Directory of Open Access Journals (Sweden)

    Michelli Pereira da COSTA

    Full Text Available Abstract In 2012, the Open Access Movement to scientific information celebrated ten years of existence. The period, which represents the first stage of consolidation of the movement, has been analyzed to allow the planning of new phases. With the purpose of providing tools and contributing to these discussions, the article addresses the historical aspects of the international and regional constitution of Open Access Movement. The approach was developed from a descriptive temporal narrative of the main events and initiatives identified in the scientific literature on the subject. The elements discussed in the present study work were organized under two parameters. The first refers to a temporal perspective, defined from the publication of Budapest Open Access Initiative. The second is related to brief discussion of the participation of Latin America. As result, we present a timeline of open access in the world and in Latin America, showing the main aspects covered in the study. The goal of the study is achieved by the proposed systematization as we analyze the open access initiatives in Latin America and establish how they influenced and were influenced by other regions of the world.

  5. Open Access Scholarly Journal Publishing in Chinese

    Directory of Open Access Journals (Sweden)

    Cenyu Shen

    2017-09-01

    Full Text Available The research literature on open access (OA publishing has mainly dealt with journals publishing in English, and studies focusing on OA journals in other languages are less common. This article addresses this gap via a case study focusing on Chinese-language OA journals. It starts with the identification of the major characteristics of this market, followed by eight semi-structured interviews to explore the key motivations behind Chinese-language OA publishing and perceived barriers. The majority of Chinese OA journals are published in Chinese, and most of them are published by universities and scholarly societies. Nearly 80% of journals were launched before the digital age and were converted to OA later. The subject distribution is highly skewed towards the science, technology, engineering and medicine (STEM fields. Publishers are motivated to convert journals to OA by an expected increase in academic impact, which would also attract more submissions. The lack of a sufficient number of high-quality submissions is perceived as the largest barrier to the successful publishing of journals. The financial instability of journals is identified as the main obstacle hindering internationalisation. The central conclusions of the study are that Chinese-language OA journals need to increase their visibility in journal indexes such as the Directory of Open Access Journals (DOAJ, and that an OA publishing platform (similar to the Latin American SciELO should be established for Chinese-language OA journals.

  6. Improving Open Access through Prior Learning Assessment

    Directory of Open Access Journals (Sweden)

    Shuangxu Yin

    2013-01-01

    Full Text Available This paper explores and presents new data on how to improve open access in distance education through using prior learning assessments. Broadly there are three types of prior learning assessment (PLAR: Type-1 for prospective students to be allowed to register for a course; Type-2 for current students to avoid duplicating work-load to gain certification; and Type-3 mapping occupational skills as portfolio-needs analysis. In each of these some e-assessment can play a role, notably in Type-3 in distance education. Our previous research has been in Type-2 and we report the empirical results and challenges involved in practice. Moving beyond Type-2 we further report how e-Type-3 can improve our practice in the Open University of China—a very large ODL provider. We discuss the barriers and challenges being faced, and ways being explored to resolve these issues, to reduce the costs involved and to improve open access to learning.

  7. Open Access and Canadian Libraries: Taking a Position

    OpenAIRE

    Morrison, Heather; Waller, Andrew

    2008-01-01

    The co-convenors of the Canadian Library Association (CLA) Task Force on Open Access report on the work of the Task Force. CLA has adopted strong policies on open access to CLA's own publications, most of which have been implemented. CLA has contributed to consultations on open access. On May 21, 2008, CLA approved a Position Statement on Open Access for Canadian Libraries. The Position Statement reinforces access to information as one of librarianship's key values. Libraries are encoura...

  8. Open Data poster for Open Access Week - AI file

    OpenAIRE

    Briney, Kristin

    2013-01-01

    Adobe Illustrator (.ai) version of the Open Data/Open Access week poster.   PDF version: http://figshare.com/articles/Open_Data_Poster_for_Open_Access_Week/828595 Combined fileset here: http://figshare.com/articles/Open_Data_Poster_for_Open_Access_Week/828597

  9. Open Data Poster for Open Access Week - PDF file

    OpenAIRE

    Briney, Kristin

    2013-01-01

    .pdf version of the Open Data/Open Access Week poster.   Illustrator version: http://figshare.com/articles/Open_Data_poster_for_Open_Access_Week/828596 Combined fileset here: http://figshare.com/articles/Open_Data_Poster_for_Open_Access_Week/828597

  10. The open-access debate Rüdiger Voss extols the virtues of open access

    CERN Multimedia

    Voss, Rüdiger

    2007-01-01

    "Publishers are under increasing pressure to make journal papers freee to all by abolishing subscriptions and making authors pay a fee instead. Rüdiger Voss welcomes the benefits that "open access" publishing brings, while John Enderby warns that this new publishing model comes at a price."

  11. Is open access sufficient? A review of the quality of open-access nursing journals.

    Science.gov (United States)

    Crowe, Marie; Carlyle, Dave

    2015-02-01

    The present study aims to review the quality of open-access nursing journals listed in the Directory of Open Access Journals that published papers in 2013 with a nursing focus, written in English, and were freely accessible. Each journal was reviewed in relation to their publisher, year of commencement, number of papers published in 2013, fee for publication, indexing, impact factor, and evidence of requirements for ethics and disclosure statements. The quality of the journals was assessed by impact factors and the requirements for indexing in PubMed. A total of 552 were published in 2013 in the 19 open-access nursing journals that met the inclusion criteria. No journals had impact factors listed in Web of Knowledge, but three had low Scopus impact factors. Only five journals were indexed with PubMed. The quality of the 19 journals included in the review was evaluated as inferior to most subscription-fee journals. Mental health nursing has some responsibility to the general public, and in particular, consumers of mental health services and their families, for the quality of papers published in open-access journals. The way forward might involve dual-platform publication or a process that enables assessment of how research has improved clinical outcomes. © 2014 Australian College of Mental Health Nurses Inc.

  12. Cuban Science and the Open Access Alternative

    CERN Document Server

    Arencibia Jorge, Ricardo; Torricella-Morales, Raúl G

    2004-01-01

    Science in Cuba has experienced extraordinary development since the triumph of the Cuban Revolution, in spite of the blockade to which Cuba has been subjected by the United States Government, and thanks to the support and cooperation of the countries that were part of the former Socialist Block. However, after the destruction of the Socialist Block, the Cuban economy suffered through a restructuring process that included the reorganization of the traditional systems for spreading scientific information. At that moment, it was necessary to use alternative means to effectively publicise, to the international scientific community, the information generated by Cuban scientists and scholars. This paper briefly reviews this new era, the institutions that led the process of change, and the future projections based on knowledge of the digital environment and the creation of electronic and open access information sources.

  13. Is rational discussion of open access possible?

    Directory of Open Access Journals (Sweden)

    Rick Anderson

    2014-07-01

    Full Text Available Open Access (OA, like any other model or strategy for the dissemination of knowledge, carries with it clear benefits as well as costs and downsides. These vary depending on the OA strategy in question, and in order for OA to bring maximum benefit to the world of scholarship, its costs and benefits need be examined carefully and dispassionately so that the former can be maximized and the latter minimized. Unfortunately, the OA advocacy community tends to resist all attempts to examine OA in this way, to the point that those who approach OA in a spirit of critical analysis (rather than celebration and evangelism are attacked and punished. This article describes the problem, provides examples of it, and proposes strategies for promoting a more rigorous and analytical discussion of OA.

  14. Open Access Data Sharing in Genomic Research

    Directory of Open Access Journals (Sweden)

    Stacey Pereira

    2014-08-01

    Full Text Available The current emphasis on broad sharing of human genomic data generated in research in order to maximize utility and public benefit is a significant legacy of the Human Genome Project. Concerns about privacy and discrimination have led to policy responses that restrict access to genomic data as the means for protecting research participants. Our research and experience show, however, that a considerable number of research participants agree to open access sharing of their genomic data when given the choice. General policies that limit access to all genomic data fail to respect the autonomy of these participants and, at the same time, unnecessarily limit the utility of the data. We advocate instead a more balanced approach that allows for individual choice and encourages informed decision making, while protecting against the misuse of genomic data through enhanced legislation.

  15. Patterns of Student Enrolment and Attrition in Australian Open Access Online Education: A Preliminary Case Study

    Science.gov (United States)

    Greenland, Steven J.; Moore, Catherine

    2014-01-01

    Swinburne University of Technology has experienced tremendous growth in open access online learning and as such is typical of the many Australian institutions that have ventured into online tertiary education. While research in online education continues to expand, comparatively little investigates students' enrolment and attrition. This research…

  16. On the golden road : Open access publishing in particle physics

    CERN Multimedia

    CERN. Geneva

    2007-01-01

    The particle physics community has over the last 15 years achieved so-called full green open access through the wide dissemination ofpreprints via arXiv, a central subject repository managed by Cornell University. However, green open access does not alleviate the economical difficulties of libraries as these still are expected to offer access to versions of record of the peer-reviewed literature. For this reason the particle physics community is now addressing the issue of gold open access by converting a set of the existing core journals to open access. A working party works now to bring together funding agencies, laboratories and libraries into a single consortium, called SCOAP3 (Sponsoring Consortium for Open access Publishing in Particle Physics). This consortium will engage with publishers towards building a sustainable model for open access publishing. In this model, subscription fees from multiple institutions are replaced with contracts with publishers of open access journals where the SCOAP3 consort...

  17. On the golden road Open access publishing in particle physics

    CERN Document Server

    CERN. Geneva; Yeomans, Joanne

    2007-01-01

    The particle physics community has over the last 15 years achieved so-called full green open access through the wide dissemination ofpreprints via arXiv, a central subject repository managed by Cornell University. However, green open access does not alleviate the economical difficulties of libraries as these still are expected to offer access to versions of record of the peer-reviewed literature. For this reason the particle physics community is now addressing the issue of gold open access by converting a set of the existing core journals to open access. A working party works now to bring together funding agencies, laboratories and libraries into a single consortium, called SCOAP3 (Sponsoring Consortium for Open access Publishing in Particle Physics). This consortium will engage with publishers towards building a sustainable model for open access publishing. In this model, subscription fees from multiple institutions are replaced with contracts with publishers of open access journals where the SCOAP3 consorti...

  18. Do open access biomedical journals benefit smaller countries? The Slovenian experience.

    Science.gov (United States)

    Turk, Nana

    2011-06-01

    Scientists from smaller countries have problems gaining visibility for their research. Does open access publishing provide a solution? Slovenia is a small country with around 5000 medical doctors, 1300 dentists and 1000 pharmacists. A search of Slovenia's Bibliographic database was carried out to identity all biomedical journals and those which are open access. Slovenia has 18 medical open access journals, but none has an impact factor and only 10 are indexed by Slovenian and international bibliographic databases. The visibility and quality of medical papers is poor. The solution might be to reduce the number of journals and encourage Slovenian scientists to publish their best articles in them. © 2011 The authors. Health Information and Libraries Journal © 2011 Health Libraries Group.

  19. Open Access Publishing in the Electronic Age.

    Science.gov (United States)

    Kovács, Gábor L

    2014-10-01

    The principle of open-access (OA) publishing is more and more prevalent also on the field of laboratory medicine. Open-access journals (OAJs) are available online to the reader usually without financial, legal, or technical barriers. Some are subsidized, and some require payment on behalf of the author. OAJs are one of the two general methods for providing OA. The other one is self-archiving in a repository. The electronic journal of the IFCC (eJIFCC) is a platinum OAJ- i.e. there is no charge to read, or to submit to this journal. Traditionally, the author was required to transfer the copyright to the journal publisher. Publishers claimed this was necessary in order to protect author's rights. However, many authors found this unsatisfactory, and have used their influence to affect a gradual move towards a license to publish instead. Under such a system, the publisher has permission to edit, print, and distribute the article commercially, but the author(s) retain the other rights themselves. An OA mandate is a policy adopted by a research institution, research funder, or government which requires researchers to make their published, peer-reviewed journal articles and conference papers OA by self-archiving their peer-reviewed drafts in a repository ("green OA") or by publishing them in an OAJ ("gold OA"). Creative Commons (CC) is a nonprofit organization that enables the sharing and use of creativity and knowledge through free legal tools. The free, easy-to-use copyright licenses provide a simple, standardized way to give the public permission to share and use creative work. CC licenses let you easily change your copyright terms from the default of "all rights reserved" to "some rights reserved." OA publishing also raises a number of new ethical problems (e.g. predatory publishers, fake papers). Laboratory scientists are encouraged to publish their scientific results OA (especially in eJIFCC). They should, however, be aware of their rights, institutional mandate

  20. Open Access and Discovery Tools: How do Primo Libraries Manage Green Open Access Collections?

    OpenAIRE

    Renaville, François

    2016-01-01

    Scholarly Open Access repositories contain lots of treasures including rare or otherwise unpublished materials and articles that scholars self-archive, often as part of their institution's mandate. But it can be hard to discover this material unless users know exactly where to look. Since the very beginning, libraries have played a major role in supporting the OA movement. Next to all services they can provide to support the deposit of research output in the repositories, they can make Op...

  1. Prospect for development of Open Access in Argentina

    OpenAIRE

    Miguel, Sandra; Bongiovani, Paola; Gómez, Nancy Diana; Bueno de la Fuente, Gema

    2013-01-01

    This perspective article presents an overview of the Open Access movement in Argentina, from a global and regional (Latin American) context. The article describes the evolution and current state of initiatives by examining two principal approaches to Open Access in Argentina: golden and green roads. The article will then turn its attention to: the support that Open Access receives from governmental sources; collaboration with international projects; and the perspective of Argentine authors re...

  2. Overview and perspectives for Open Access development in Argentina

    Directory of Open Access Journals (Sweden)

    Sandra Miguel

    2013-04-01

    Full Text Available This paper provides an overview and perspectives for development of the Open Access movement in Argentina, within the global and regional (Latin American context. It outlines the evolution and current state of initiatives around the two main approaches to Open Access, the golden and green roads. The main Open Access policies and support of OA movement by governments in Latin American region, and particularly in Argentina, are highlighted, while recent studies on publishing practices and authors’ positions regarding Open Access are presented. The paper concludes that the prospects for development of OA in Argentina, both through golden and green roads are favorable, with their strengths and shortcomings

  3. Citation advantage of open access articles.

    Directory of Open Access Journals (Sweden)

    Gunther Eysenbach

    2006-05-01

    Full Text Available Open access (OA to the research literature has the potential to accelerate recognition and dissemination of research findings, but its actual effects are controversial. This was a longitudinal bibliometric analysis of a cohort of OA and non-OA articles published between June 8, 2004, and December 20, 2004, in the same journal (PNAS: Proceedings of the National Academy of Sciences. Article characteristics were extracted, and citation data were compared between the two groups at three different points in time: at "quasi-baseline" (December 2004, 0-6 mo after publication, in April 2005 (4-10 mo after publication, and in October 2005 (10-16 mo after publication. Potentially confounding variables, including number of authors, authors' lifetime publication count and impact, submission track, country of corresponding author, funding organization, and discipline, were adjusted for in logistic and linear multiple regression models. A total of 1,492 original research articles were analyzed: 212 (14.2% of all articles were OA articles paid by the author, and 1,280 (85.8% were non-OA articles. In April 2005 (mean 206 d after publication, 627 (49.0% of the non-OA articles versus 78 (36.8% of the OA articles were not cited (relative risk = 1.3 [95% Confidence Interval: 1.1-1.6]; p = 0.001. 6 mo later (mean 288 d after publication, non-OA articles were still more likely to be uncited (non-OA: 172 [13.6%], OA: 11 [5.2%]; relative risk = 2.6 [1.4-4.7]; p < 0.001. The average number of citations of OA articles was higher compared to non-OA articles (April 2005: 1.5 [SD = 2.5] versus 1.2 [SD = 2.0]; Z = 3.123; p = 0.002; October 2005: 6.4 [SD = 10.4] versus 4.5 [SD = 4.9]; Z = 4.058; p < 0.001. In a logistic regression model, controlling for potential confounders, OA articles compared to non-OA articles remained twice as likely to be cited (odds ratio = 2.1 [1.5-2.9] in the first 4-10 mo after publication (April 2005, with the odds ratio increasing to 2.9 (1

  4. Open access publishing in Africa: advancing research outputs to ...

    African Journals Online (AJOL)

    The purpose of the study was to examine the status of Africa in the open access environment as well as the challenges of providing global visibility to African research outputs. A descriptive bibliometric approach was adopted for the study. Data was extracted from two world repository directories (Registry of Open Access ...

  5. Awareness and utilization of open access resources in Asom Bur ...

    African Journals Online (AJOL)

    Data collected were analyzed using tables, percentage and frequency distribution. Results revealed that the undergraduate students of University of Mkar University are moderately aware of the existence of Open Access Resources (OARs), majority of the students who use open access resources do so to supplement the ...

  6. Awareness and Use of Open Access Scholarly Publications by ...

    African Journals Online (AJOL)

    The study investigated the awareness and use of Open Access scholarly publications by postgraduate students of Faculty of Science in Ahmadu Bello University Zaria (ABU), Kaduna State, Nigeria. The study was guided by four research objectives namely to determine the channels of awareness of Open Access ...

  7. Prospect for Development of Open Access in Argentina

    Science.gov (United States)

    Miguel, Sandra; Bongiovani, Paola C.; Gomez, Nancy D.; Bueno-de-la-Fuente, Gema

    2013-01-01

    This perspective article presents an overview of the Open Access movement in Argentina, from a global and regional (Latin American) context. The article describes the evolution and current state of initiatives by examining two principal approaches to Open Access in Argentina: "golden" and "green roads". The article will then…

  8. BMC Medicine editorial board members on open access publishing.

    Science.gov (United States)

    Carmont, Michael R; Lawn, Stephen D; Stray-Pedersen, Babill; Shoenfeld, Yehuda; Meier, Pascal

    2014-01-21

    In recognition of Open Access week (21st-27th October 2013), we asked some BMC Medicine Editorial Board Members to share their views and experiences on open access publishing. In this short video, they highlight the benefits of visibility and dissemination of their research, and discuss the future directions for this model of publishing.

  9. APS extends open access to all its journals

    CERN Multimedia

    Thomas, Kim

    2006-01-01

    "Physics research promoter and publisher the American Physical Society (APS) is to extend open access to all its journals. Th APS previously made its five print journals available through subscriptions, and its two e-journals (Physical Review Special Topics and Physics Educatoin Research) on an open access basis." (1/2 page)

  10. The Impact Factor: Implications of Open Access on Quality

    Science.gov (United States)

    Grozanick, Sara E.

    2010-01-01

    There has been debate about the extent to which open access affects the quality of scholarly work. At the same time, researchers have begun to look for ways to evaluate the quality of open access publications. Dating back to the growth of citation indexes during the 1960s and 1970s, citation analysis--examining citation statistics--has since been…

  11. Open access initiative and the developing world | Christian | African ...

    African Journals Online (AJOL)

    In a world of inequality, the open access initiative seeks to provide people all over the world (irrespective of where they live) with equal access to knowledge and information. This paper examines the concept of open access initiative from the perspective of the developing world, highlights the benefits developing countries ...

  12. Stort potentiale for Open Access i professionshøjskolerne

    DEFF Research Database (Denmark)

    Greve, Charlotte; Larsen, Birgit

    2013-01-01

    En ny kortlægning af mulighederne for Open Access til artikler publiceret af professionshøjskolernes medarbejdere i danske og nordiske tidsskrifter viser, at der kan opnås fuldtekstadgang til over 75 % af artiklerne. Cirka halvdelen af tidsskrifterne tillader imidlertid ikke Open Access eller...

  13. Making the case for open access to research | IDRC - International ...

    International Development Research Centre (IDRC) Digital Library (Canada)

    Making the case for open access to research. Erika Malich. Research Awards. 2016. @erikathinks. “Research should be a public good,” says 2016 ... “This reminds me that we can all make our work more accessible,” she says. One way is through publishing open access and using different kinds of platforms, such as blogs.

  14. Open access, open education resources and open data in Uganda ...

    African Journals Online (AJOL)

    ... students organized a 3 day workshop Open Access, Open Education Resources and Open Data in Kampala from 15-18 December 2014. One of the aims of the workshop was to engage the Open Access movement in Uganda which encompasses the scientific community, librarians, academia, researchers and students.

  15. Public Policy and the Politics of Open Access

    Directory of Open Access Journals (Sweden)

    David C. Prosser

    2007-08-01

    Full Text Available In the five years since the launch of the Budapest Open Access Initiative in February 2002, one of the most striking developments in the scholarly communications landscape has been the increasing interest taken in open access at a policy level. Today, open access (in the form of both self-archiving and open access journals is routinely discussed and debated at an institutional-level, within research-funding bodies, nationally, and internationally. The debate has moved out of the library and publisher communities to take a more central place in discussions on the ‘knowledge economy’, return on investment in research, and the nature of e-science. This paper looks at some of the public policy drivers that are impacting on scholarly communications and describes the major policy initiatives that are supporting a move to open access.

  16. Grøn Open Access i Praksis

    DEFF Research Database (Denmark)

    Open Access indikatoren påviste et uudnyttet potentiale på ca 60%, men hvorfor er der så ikke mere Open Access indhold?. I det konkrete arbejde med forskningsregistrering og registrering af post-prints støder bibliotekerne på en række udfordringer, som vanskeliggør institutionernes muligheder...... for at nå de nationale Open Access mål. Det er for eksempel inden for områderne rettigheder og licenser, tilladte Open Access versioner, embargoperioder m.m., at vi støder på problemer. Det er disse meget konkrete udfordringer, der arbejdes med i det kommende DEFF projekt ”Grøn Open Access i praksis”....

  17. Open Access Publishing in the Field of Medical Informatics.

    Science.gov (United States)

    Kuballa, Stefanie

    2017-05-01

    The open access paradigm has become an important approach in today's information and communication society. Funders and governments in different countries stipulate open access publications of funded research results. Medical informatics as part of the science, technology and medicine disciplines benefits from many research funds, such as National Institutes of Health in the US, Wellcome Trust in UK, German Research Foundation in Germany and many more. In this study an overview of the current open access programs and conditions of major journals in the field of medical informatics is presented. It was investigated whether there are suitable options and how they are shaped. Therefore all journals in Thomson Reuters Web of Science that were listed in the subject category "Medical Informatics" in 2014 were examined. An Internet research was conducted by investigating the journals' websites. It was reviewed whether journals offer an open access option with a subsequent check of conditions as for example the type of open access, the fees and the licensing. As a result all journals in the field of medical informatics that had an impact factor in 2014 offer an open access option. A predominantly consistent pricing range was determined with an average fee of 2.248 € and a median fee of 2.207 €. The height of a journals' open access fee did not correlate with the height of its Impact Factor. Hence, medical informatics journals have recognized the trend of open access publishing, though the vast majority of them are working with the hybrid method. Hybrid open access may however lead to problems in questions of double dipping and the often stipulated gold open access.

  18. Counting the Cost: A Report on APC-Supported Open Access Publishing in a Research Library

    OpenAIRE

    Newton, Mark P.; Cunningham, Eva T.; O'Connell, Kerri

    2014-01-01

    BACKGROUND At one-hundred twenty-two articles published, the open access journal Tremor and Other Hyperkinetic Movements (Tremor) is growing its readership and expanding its influence among patients, clinicians, researchers, and the general public interested in issues of non-Parkinsonian tremor disorders. Among the characteristics that set the journal apart from similar publications, Tremor is published in partnership with the library-based publications program at Columbia University’s Center...

  19. Expanding the Halohydrin Dehalogenase Enzyme Family: Identification of Novel Enzymes by Database Mining.

    Science.gov (United States)

    Schallmey, Marcus; Koopmeiners, Julia; Wells, Elizabeth; Wardenga, Rainer; Schallmey, Anett

    2014-12-01

    Halohydrin dehalogenases are very rare enzymes that are naturally involved in the mineralization of halogenated xenobiotics. Due to their catalytic potential and promiscuity, many biocatalytic reactions have been described that have led to several interesting and industrially important applications. Nevertheless, only a few of these enzymes have been made available through recombinant techniques; hence, it is of general interest to expand the repertoire of these enzymes so as to enable novel biocatalytic applications. After the identification of specific sequence motifs, 37 novel enzyme sequences were readily identified in public sequence databases. All enzymes that could be heterologously expressed also catalyzed typical halohydrin dehalogenase reactions. Phylogenetic inference for enzymes of the halohydrin dehalogenase enzyme family confirmed that all enzymes form a distinct monophyletic clade within the short-chain dehydrogenase/reductase superfamily. In addition, the majority of novel enzymes are substantially different from previously known phylogenetic subtypes. Consequently, four additional phylogenetic subtypes were defined, greatly expanding the halohydrin dehalogenase enzyme family. We show that the enormous wealth of environmental and genome sequences present in public databases can be tapped for in silico identification of very rare but biotechnologically important biocatalysts. Our findings help to readily identify halohydrin dehalogenases in ever-growing sequence databases and, as a consequence, make even more members of this interesting enzyme family available to the scientific and industrial community. Copyright © 2014, American Society for Microbiology. All Rights Reserved.

  20. What is needed for effective open access workflows?

    CERN Multimedia

    CERN. Geneva

    2017-01-01

    Institutions and funders are pushing forward open access with ever new guidelines and policies. Since institutional repositories are important maintainers of green open access, they should support easy and fast workflows for researchers and libraries to release publications. Based on the requirements specification of researchers, libraries and publishers, possible supporting software extensions are discussed. How does a typical workflow look like? What has to be considered by the researchers and by the editors in the library before releasing a green open access publication? Where and how can software support and improve existing workflows?

  1. The Starchive: An open access, open source archive of nearby and young stars and their planets

    Science.gov (United States)

    Tanner, Angelle; Gelino, Chris; Elfeki, Mario

    2015-12-01

    Historically, astronomers have utilized a piecemeal set of archives such as SIMBAD, the Washington Double Star Catalog, various exoplanet encyclopedias and electronic tables from the literature to cobble together stellar and exo-planetary parameters in the absence of corresponding images and spectra. As the search for planets around young stars through direct imaging, transits and infrared/optical radial velocity surveys blossoms, there is a void in the available set of to create comprehensive lists of the stellar parameters of nearby stars especially for important parameters such as metallicity and stellar activity indicators. For direct imaging surveys, we need better resources for downloading existing high contrast images to help confirm new discoveries and find ideal target stars. Once we have discovered new planets, we need a uniform database of stellar and planetary parameters from which to look for correlations to better understand the formation and evolution of these systems. As a solution to these issues, we are developing the Starchive - an open access stellar archive in the spirit of the open exoplanet catalog, the Kepler Community Follow-up Program and many others. The archive will allow users to download various datasets, upload new images, spectra and metadata and will contain multiple plotting tools to use in presentations and data interpretations. While we will highly regulate and constantly validate the data being placed into our archive the open nature of its design is intended to allow the database to be expanded efficiently and have a level of versatility which is necessary in today's fast moving, big data community. Finally, the front-end scripts will be placed on github and users will be encouraged to contribute new plotting tools. Here, I will introduce the community to the content and expected capabilities of the archive and query the audience for community feedback.

  2. Brain Sciences – An Open Access Journal

    Directory of Open Access Journals (Sweden)

    Germán Barrionuevo

    2010-07-01

    Full Text Available During the first ten years that followed “The Decade of the Brain”, the quest of neuroscience for understanding brain function in health and disease has greatly expanded to include molecular, developmental, cognitive and evolutionary aspects of the nervous system. This increased multidisciplinary effort has been complemented by the spectacular development of highly sophisticated experimental methods. Neuroscientists can now perform studies ranging from molecular and imaging analysis of single pre- and postsynaptic neuronal processes to imaging of neural activity in the whole brain during perceptual and motor behavioral tasks. At the same time, theoretical advances in neuroscience have been aided by the rapid development of mathematical and computational simulations of biologically and functionally realistic single cells and complex neural networks across multiple spatiotemporal scales. Therefore, neuroscientists are more than ever in a position to deliver answers to basic, medical and biotechnological questions related to brain function and dysfunction. [...

  3. Open Access and citation count: a CSIR case study

    CSIR Research Space (South Africa)

    Ramorulane, Dave

    2012-06-01

    Full Text Available Open Access (OA) refers to electronic scholarly articles, books, monographs and other grey literature that is freely available. Various electronic platforms limit access to their content due to subscription costs, firewalls, and other access...

  4. Launch of physics journals boosts open-access club

    CERN Multimedia

    2007-01-01

    "Open-access publisher BioMed Central is launching three new physics journals under the sister brand-name PhysMath Central. they will sit alongside the company's portfolio of 176 biomedical titles." (1/4 page)

  5. BOM@ERCIM - Towards an open access policy For ERCIM

    NARCIS (Netherlands)

    Baeten, J.; Candela, L.; Fava, I.; Kirchner, C.; Mettrop, W.; Romary, L.; Schultze, L.

    2015-01-01

    This working paper presents collects background elements that have been discussed when designing the set of recommendations expressed in the BOM report. Such background elements highlight the key role current and future repositories may play in the open access arena.

  6. Recommendations for the Open Access Transition: Strategic and practical anchorage of Open Access in informational provisioning of research institutions

    OpenAIRE

    Bruch, Christoph Dr.; Geschuhn, Kai; Hanig, Kristina; Hillenkötter, Kristine; Pampel, Heinz; Schäffler, Hildegard Dr.; Scheiner, Annette Dr.; Scholze, Frank; Stanek, Ursula Dr.; Timm, Arnulf Dr.; Tullney, Marco

    2016-01-01

    The following “Recommendations for Open Access transition” have been compiled by the Ad-hoc workgroup “Open-Access-Gold” in the priority initiative “Digital Information” of the Alliance of Science Organizations in Germany . They are based on “Positions on creating an Open Access publication market which is scholarly adequate” as mapped out by the workgroup. They mainly address academic libraries as well as publishing houses and other actors in the field of scientific publishing. The recommend...

  7. Open Access : a new opportunity for scholarly communication

    OpenAIRE

    Comba, Valentina

    2005-01-01

    Conference Overview - Introduction - A changing environment: reasons and conditions leading to the Open Access movement the crisis of scholarly communication in the late nineties: prices, technologies and policies - The main “players” reactions: publishers, authors, libraries (universities) - Steps forward: the Budapest “Manifesto”, the Paris Conference, the Berlin Declaration. - The debate and its evolution: the Open Access as an opportunity - Copyright and the relations...

  8. Full Open Access Journals Have Increased Impact Factors

    Directory of Open Access Journals (Sweden)

    Shu-Kun Lin

    2009-06-01

    Full Text Available We are pleased to report the increase of the impact factors of MDPI journals during 2007 and 2008. In 2005 and part of 2006, the use of a two tier publication system, whereby we offered full Open Access publication to those authors willing to contribute financially to support this option, while providing the alternative choice of free publication without Open Access for those authors who preferred not to pay, resulted in the obviously decreased impact factors seen in 2006 [...

  9. The Critical Role of Institutional Services in Open Access Advocacy

    Directory of Open Access Journals (Sweden)

    Tomasz Neugebauer

    2013-06-01

    Full Text Available This paper examines the development of the Open Access movement in scholarly communication, with particular attention to some of the rhetorical strategies and policy mechanisms used to promote it to scholars and scientists. Despite the majority of journal publishers’ acceptance of author self-archiving practices, and the minimal time commitment required by authors to successfully self-archive their work in disciplinary or institutional repositories, the majority of authors still by and large avoid participation. The paper reviews the strategies and arguments used for increasing author participation in open access, including the role of open access mandates. We recommend a service-oriented approach towards increasing participation in open access, rather than rhetoric that speculates on the benefits that open access will have on text/data mining innovation. In advocating for open access participation, we recommend focusing on its most universal and tangible purpose: increasing public open (gratis access to the published results of publicly funded research. Researchers require strong institutional support to understand the copyright climate of open access self-archiving, user-friendly interfaces and useful metrics, such as repository usage statistics. We recommend that mandates and well-crafted and responsive author support services at universities will ultimately be required to ensure the growth of open access. We describe the mediated deposit service that was developed to support author self-archiving in Spectrum: Concordia University Research Repository. By comparing the number of deposits of non-thesis materials (e.g. articles and conference presentations that were accomplished through the staff-mediated deposit service to the number of deposits that were author-initiated, we demonstrate the relative significance of this service to the growth of the repository.

  10. [Reconceptualising the meaning of scientific communication: open access].

    Science.gov (United States)

    Guédon, Jean-Claude

    2008-01-01

    The recent US law (H.R.2764) affecting NIH policy and the recent unanimous vote by the Arts and Science faculty of Harvard University in favour of a mandatory deposit of researchers' publications in a suitable repository have brought the Open Access movement into public light. After reviewing the historical background of Open Access, its evolution and extension in the United States, Great Britain, France and Canada are examined. Policies aiming at strengthening Open Access to scientific research are viewed as the direct consequence of treating scientific publishing as an integral part of the research cycle. It should, therefore, be wrapped into the financing of research. As the greater part of research is funded by public money, it appears legitimate to make its results as widely available as is possible. Open Access journals and repositories with strong deposit mandates form the backbone of the strategies to achieve the objective of Open Access. Despite the claims of some publishers, Open Access does not weaken or threaten the peer review process, and it does not conflict with copyright laws.

  11. Knowledge unbound selected writings on Open Access, 2002-2011

    CERN Document Server

    Suber, Peter

    2016-01-01

    Peter Suber has been a leading advocate for open access since 2001 and has worked full time on issues of open access since 2003. As a professor of philosophy during the early days of the internet, he realized its power and potential as a medium for scholarship. As he writes now, "it was like an asteroid crash, fundamentally changing the environment, challenging dinosaurs to adapt, and challenging all of us to figure out whether we were dinosaurs." When Suber began putting his writings and course materials online for anyone to use for any purpose, he soon experienced the benefits of that wider exposure. In 2001, he started a newsletter -- the Free Online Scholarship Newsletter, which later became the SPARC Open Access Newsletter -- in which he explored the implications of open access for research and scholarship. This book offers a selection of some of Suber's most significant and influential writings on open access from 2002 to 2010. In these texts, Suber makes the case for open access to research; answers c...

  12. Use of the Paid Open Access Option in Hybrid Open Access Journals in Agriculture: A Mixed-Methods Study

    Directory of Open Access Journals (Sweden)

    Megan Kocher

    2016-12-01

    Full Text Available We explore the use and usefulness of the hybrid open access publishing model in agricultural sciences using a combination of quantitative and qualitative methods. To ascertain the level of usage of the paid open access option in hybrid open access journals in agriculture, we studied the agriculture-related journals published by six commercial publishers. These publishers offer authors the option of paying a fee, often close to $3,000 per article, to make their article immediately freely available, usually with a Creative Commons license. We defined agriculture broadly but also assigned each journal to a subspecialty (e.g., animal science in order to see if there were differences based on these subdivisions. For each journal we gathered data for 2014-2015 and noted the total number of research articles and the number of those that were made freely available by authors paying the open access fee. To give context to our results we also surveyed local faculty in agricultural sciences, asking their reasons for considering the paid open access options and the sources of the funds to pay for it. Survey respondents were asked about their academic position and rank to see if there were differences to be noted. We also investigated the findability of the open access articles, noting if each individual publisher offered a way to easily locate all the freely available articles in a particular journal and if there are other avenues to easily locate these articles.

  13. The surge of predatory open-access in neurosciences and neurology.

    Science.gov (United States)

    Manca, Andrea; Martinez, Gianluca; Cugusi, Lucia; Dragone, Daniele; Dvir, Zeevi; Deriu, Franca

    2017-06-14

    Predatory open access is a controversial publishing business model that exploits the open-access system by charging publication fees in the absence of transparent editorial services. The credibility of academic publishing is now seriously threatened by predatory journals, whose articles are accorded real citations and thus contaminate the genuine scientific records of legitimate journals. This is of particular concern for public health since clinical practice relies on the findings generated by scholarly articles. Aim of this study was to compile a list of predatory journals targeting the neurosciences and neurology disciplines and to analyze the magnitude and geographical distribution of the phenomenon in these fields. Eighty-seven predatory journals operate in neurosciences and 101 in neurology, for a total of 2404 and 3134 articles issued, respectively. Publication fees range 521-637 USD, much less than those charged by genuine open-access journals. The country of origin of 26.0-37.0% of the publishers was impossible to determine due to poor websites or provision of vague or non-credible locations. Of the rest 35.3-42.0% reported their headquarters in the USA, 19.0-39.2% in India, 3.0-9.8% in other countries. Although calling themselves "open-access", none of the journals retrieved was listed in the Directory of Open Access Journals. However, 14.9-24.7% of them were found to be indexed in PubMed and PubMed Central, which raises concerns on the criteria for inclusion of journals and publishers imposed by these popular databases. Scholars in the neurosciences are advised to use all the available tools to recognize predatory practices and avoid the downsides of predatory journals. Copyright © 2017 IBRO. Published by Elsevier Ltd. All rights reserved.

  14. Gold or green: the debate on open access policies.

    Science.gov (United States)

    Abadal, Ernest

    2013-09-01

    The movement for open access to science seeks to achieve unrestricted and free access to academic publications on the Internet. To this end, two mechanisms have been established: the gold road, in which scientific journals are openly accessible, and the green road, in which publications are self-archived in repositories. The publication of the Finch Report in 2012, advocating exclusively the adoption of the gold road, generated a debate as to whether either of the two options should be prioritized. The recommendations of the Finch Report stirred controversy among academicians specialized in open access issues, who felt that the role played by repositories was not adequately considered and because the green road places the burden of publishing costs basically on authors. The Finch Report's conclusions are compatible with the characteristics of science communication in the UK and they could surely also be applied to the (few) countries with a powerful publishing industry and substantial research funding. In Spain, both the current national legislation and the existing rules at universities largely advocate the green road. This is directly related to the structure of scientific communication in Spain, where many journals have little commercial significance, the system of charging a fee to authors has not been adopted, and there is a good repository infrastructure. As for open access policies, the performance of the scientific communication system in each country should be carefully analyzed to determine the most suitable open access strategy.

  15. Reappropriation of knowledge and decolonization: Open Access as a process of political action of the South

    Directory of Open Access Journals (Sweden)

    Eduardo Aguado-López

    2016-07-01

    Full Text Available This article analyses the idea that the dominant scientific communication model entails a form of coloniality of knowledge as described by a group of Latin American social scientists from the late twentieth century, including A. Escobar, E. Dussel, and S. Castro Gomez. This form of coloniality of knowledge can be subverted by strengthening the practice of knowledge circulation known as Open Access. The paper undertakes an analysis of scientific publication in Latin America and the Caribbean. We conclude from this analysis that scientific production in this area is underrepresented in databases such as Journal Citation Report (jcr and Scientific Journal Ranking (sjr. Following this analysis we reassess the presence of Latin American social science in other databases such as SciELO and Redalyc. We do so using Agamben’s category of dipositif alongside that of coloniality of knowledge. These two theoretical elements contribute to the political meaning of Open Access in Latin America and the Caribbean. Open Access thus constitutes a political move towards decolonization and the reappropriation of knowledge, allowing the “return” of publicly-funded research.

  16. Afsluttende rapport fra DEFF projektet “Support Open Access Publishing” (SOAP)

    DEFF Research Database (Denmark)

    Ekstrøm, Jeannette

    for hjælp og vejledning til de små tidsskrifters redaktører i forhold til ophavsret og open access. Anden del af projektets formål var at undersøge muligheden for etableringen af en database, som kan understøtte forskerne med at tage oplyste, valg når de vælger publiceringskanal. Dette skal ske ved...... at sammenstille en række kilder, såsom muligheder for open access, rankings, pris mv. Projektgruppen demonstrerer i foranalysen, at der findes kilder som kan anvendes og som har adgang til data og har åbne API’er. Og dette konkretiseres endelig i SOAP databasens mock-up. Endeligt afsluttes rapporten med...

  17. Open access and the future of scholarly communication

    CERN Document Server

    Dickson, Katherine A

    It is impossible to imagine the future of academic libraries without an extensive consideration of open access the removal of price and permission barriers from scholarly research online. As textbook and journal subscription prices continue to rise, improvements in technology make online dissemination of scholarship less expensive, and faculty recognize the practical and philosophical appeal of making their work available to wider audiences. As a consequences, libraries have begun to consider a wide variety of open access flavors and business models. These new possibilities have significant impact on both library services and collection policies, and the call for new skills within library staffing. Volume 9 of the series Creating the 21st-Century Academic Library is the first of two addressing the topic of open access in academic libraries and focuses on policy and infrastructure for libraries that wish to provide leadership on their campus in the transition to more open forms of scholarship. Chapters in the ...

  18. Open access, open education resources and open data in Uganda.

    Science.gov (United States)

    Salvo, Ivana Di; Mwoka, Meggie; Kwaga, Teddy; Rukundo, Priscilla Aceng; Ernest, Dennis Ssesanga; Osaheni, Louis Aikoriogie; John, Kasibante; Shafik, Kasirye; de Sousa, Agostinho Moreira

    2015-01-01

    As a follow up to OpenCon 2014, International Federation of Medical Students' Associations (IFMSA) students organized a 3 day workshop Open Access, Open Education Resources and Open Data in Kampala from 15-18 December 2014. One of the aims of the workshop was to engage the Open Access movement in Uganda which encompasses the scientific community, librarians, academia, researchers and students. The IFMSA students held the workshop with the support of: Consortium for Uganda University Libraries (CUUL), The Right to Research Coalition, Electronic Information for Libraries (EIFL), Makerere University, International Health Sciences University (IHSU), Pan African Medical Journal (PAMJ) and the Centre for Health Human Rights and Development (CEHURD). All these organizations are based or have offices in Kampala. The event culminated in a meeting with the Science and Technology Committee of Parliament of Uganda in order to receive the support of the Ugandan Members of Parliament and to make a concrete change for Open Access in the country.

  19. Open access and the humanities contexts, controversies and the future

    CERN Document Server

    Eve, Martin Paul

    2014-01-01

    If you work in a university, you are almost certain to have heard the term 'open access' in the past couple of years. You may also have heard either that it is the utopian answer to all the problems of research dissemination or perhaps that it marks the beginning of an apocalyptic new era of 'pay-to-say' publishing. In this book, Martin Paul Eve sets out the histories, contexts and controversies for open access, specifically in the humanities. Broaching practical elements alongside economic histories, open licensing, monographs and funder policies, this book is a must-read for both those new to ideas about open-access scholarly communications and those with an already keen interest in the latest developments for the humanities.

  20. The Crisis in Scholarly Communication, Open Access, and Open Data Policies: The Libraries' Perspective

    Science.gov (United States)

    Besara, Rachel

    2015-03-01

    For years the cost of STEM databases have exceeded the rate of inflation. Libraries have reallocated funds for years to continue to provide support to their scientific communities, but they are reaching a point at many institutions where they are no longer able to provide access to many databases considered standard to support research. A possible or partial alleviation to this problem is the federal open access mandate. However, this shift challenges the current model of publishing and data management in the sciences. This talk will discuss these topics from the perspective of research libraries supporting physics and the STEM disciplines.

  1. Balanceret Open Access er nøglen for samfundsvidenskab

    DEFF Research Database (Denmark)

    Møllgaard, Peter

    2016-01-01

    Danmark bør overveje at korrigere Open Access-måltallet, da fagområdernes forskellige embargoperioder gør det svært at nå målene. Det mener Peter Møllgaard, forskningsdekan på CBS.......Danmark bør overveje at korrigere Open Access-måltallet, da fagområdernes forskellige embargoperioder gør det svært at nå målene. Det mener Peter Møllgaard, forskningsdekan på CBS....

  2. Welcome to Bioengineering: A New Open-Access Journal

    Directory of Open Access Journals (Sweden)

    Anthony Guiseppi-Elie

    2013-12-01

    Full Text Available It is my great pleasure to welcome you to a new open access journal, Bioengineering, which represents a scope that fits squarely with the core expertise and growing ambitions and interests of bioengineers globally. Of particular interest are the transdisciplinary and translational research represented by the activities within centers and institutes where the biological sciences and engineering disciplines cohabit seamlessly for a focus on solutions to global challenges in human, veterinary and ecological health, bioenergy, bioprocess and sustainability. Bioengineering emphasizes the publication of novel and high quality peer reviewed articles via an open access platform. The scope includes: [...

  3. Quantitative assessment of the expanding complementarity between public and commercial databases of bioactive compounds

    Directory of Open Access Journals (Sweden)

    Southan Christopher

    2009-07-01

    Full Text Available Abstract Background Since 2004 public cheminformatic databases and their collective functionality for exploring relationships between compounds, protein sequences, literature and assay data have advanced dramatically. In parallel, commercial sources that extract and curate such relationships from journals and patents have also been expanding. This work updates a previous comparative study of databases chosen because of their bioactive content, availability of downloads and facility to select informative subsets. Results Where they could be calculated, extracted compounds-per-journal article were in the range of 12 to 19 but compound-per-protein counts increased with document numbers. Chemical structure filtration to facilitate standardised comparisons typically reduced source counts by between 5% and 30%. The pair-wise overlaps between 23 databases and subsets were determined, as well as changes between 2006 and 2008. While all compound sets have increased, PubChem has doubled to 14.2 million. The 2008 comparison matrix shows not only overlap but also unique content across all sources. Many of the detailed differences could be attributed to individual strategies for data selection and extraction. While there was a big increase in patent-derived structures entering PubChem since 2006, GVKBIO contains over 0.8 million unique structures from this source. Venn diagrams showed extensive overlap between compounds extracted by independent expert curation from journals by GVKBIO, WOMBAT (both commercial and BindingDB (public but each included unique content. In contrast, the approved drug collections from GVKBIO, MDDR (commercial and DrugBank (public showed surprisingly low overlap. Aggregating all commercial sources established that while 1 million compounds overlapped with PubChem 1.2 million did not. Conclusion On the basis of chemical structure content per se public sources have covered an increasing proportion of commercial databases over the last

  4. Higher Education as an Open-Access Discipline

    Science.gov (United States)

    Harland, Tony

    2012-01-01

    In this article, I draw mainly on an analysis of my research experiences in science and higher education. My aim is to construct a conceptual argument that will help explain some of the evident complexity of the higher education field and inform future developments. I propose that the study of higher education is an open-access discipline with the…

  5. 50 CFR 660.312 - Open access fishery-prohibitions.

    Science.gov (United States)

    2010-10-01

    ... Section 660.312 Wildlife and Fisheries FISHERY CONSERVATION AND MANAGEMENT, NATIONAL OCEANIC AND... coordinates at § 660.75. (c) Fishing in conservation areas with open access gears. (1) Operate a vessel with..., Painted Cave, Anacapa Island, Carrington Point, Judith Rock, Skunk Point, Footprint, Gull Island, South...

  6. Research Support and Open Access: Notes from Nigeria | Samuel ...

    African Journals Online (AJOL)

    The remaining sections are on the World Wide Web and information sharing, Internet access in Nigeria, open access scholarly publications, and suggestions and ... The paper concluded on the need for increased funding for research by the Nigerian government as well as both for-profit and not-for-profit organisations within ...

  7. Characteristics of Open Access Journals in Six Subject Areas

    Science.gov (United States)

    Walters, William H.; Linvill, Anne C.

    2011-01-01

    We examine the characteristics of 663 Open Access (OA) journals in biology, computer science, economics, history, medicine, and psychology, then compare the OA journals with impact factors to comparable subscription journals. There is great variation in the size of OA journals; the largest publishes more than 2,700 articles per year, but half…

  8. Communicating the Open Access Message: A Case Study from Ireland

    Science.gov (United States)

    Lawton, Aoife

    2016-01-01

    Since 2009, Open Access (OA) Week has been celebrated worldwide in October each year. It is an opportunity for librarians to engage with the research community and demonstrate the value that they bring to their organisations in the area of disseminating scholarly output. Although thousands of events have been held since the inception of OA Week, a…

  9. Coalition works to secure open access to published research

    CERN Multimedia

    Brown, Susan

    2006-01-01

    "Paying upfront: a group of particle physicists has proposed a new way to pay for immediate free access to journal articles in their field. They want to raise five million to six million euros (about US $7-million) a year to buy open access to peer-reviewed papers in top physics journals. (2 pages)

  10. Open-Access Colonoscopy in Ontario: Associated Factors and Quality

    Directory of Open Access Journals (Sweden)

    Shane Hadlock

    2013-01-01

    Full Text Available BACKGROUND Open-access (OA colonoscopy may increase efficiency and decrease wait times; however, because the patient is seen for the first time at the endoscopy appointment, previous processes, such as information about the procedure, preparation and appropriate triage, may be suboptimal.

  11. INTEGRATION OF OPEN ACCESS SCIENTIFIC AND EDUCATIONAL INFORMATION RESOURCES

    Directory of Open Access Journals (Sweden)

    V. I. Brichkovskij

    2013-01-01

    Full Text Available The current state of the generation, use and dissemination of electronic information resources is analyzed. The integration of information resources and services through the application of advanced technologies of metadata have been considered. An approach aimed at creating a single information space of research and educational resources of open access is offered.

  12. Open Access Publishing Trend Analysis: Statistics beyond the Perception

    Science.gov (United States)

    Poltronieri, Elisabetta; Bravo, Elena; Curti, Moreno; Maurizio Ferri,; Mancini, Cristina

    2016-01-01

    Introduction: The purpose of this analysis was twofold: to track the number of open access journals acquiring impact factor, and to investigate the distribution of subject categories pertaining to these journals. As a case study, journals in which the researchers of the National Institute of Health (Istituto Superiore di Sanità) in Italy have…

  13. Positioning Open Access Journals in a LIS Journal Ranking

    Science.gov (United States)

    Xia, Jingfeng

    2012-01-01

    This research uses the h-index to rank the quality of library and information science journals between 2004 and 2008. Selected open access (OA) journals are included in the ranking to assess current OA development in support of scholarly communication. It is found that OA journals have gained momentum supporting high-quality research and…

  14. Acceptance and Usage of Open Access Scholarly Communication ...

    African Journals Online (AJOL)

    Acceptance and Usage of Open Access Scholarly Communication by Postgraduate Students at the Sokoine University of Agriculture and the University of Dar es ... Low awareness of the OA concept, inadequate online scholarly communication skills, and the slow Internet connectivity were possible factors affecting the ...

  15. Finding, Using and Creating Open-Access Religious Studies ...

    African Journals Online (AJOL)

    Online journals (e-journals) are fast becoming a familiar feature with Religious Studies scholars, but so far no e-journals in the field have appeared in South Africa, and contributions by South African scholars are still rare. This article examines the evolution of Religious Studies e-journals, focusing on the open access variety ...

  16. Attitude of undergraduate students towards the use of open access ...

    African Journals Online (AJOL)

    This study examine d the attitude of under graduate students towards the use of open access journals at the Delta State University, Abraka, Delta State, Nigeria. Four research questions were raised. The descriptive survey design was employed for this study. The population for the study consists of 500 students randomly ...

  17. NWO-fonds voor Open Access-publicaties

    NARCIS (Netherlands)

    den Hollander, Franciscus; Hoorn, Esther

    2010-01-01

    De Nederlandse Organisatie voor Wetenschappelijk Onderzoek (NWO) heeft sinds februari een fonds om Open Access-publicaties te stimuleren. De criteria van dit fonds zijn onlangs verruimd. NWO betaalt per project een bijdrage aan de publicatiekosten. De RUG juicht de steeds sterkere wordende trend van

  18. Legal research when relying on open access : A primer

    NARCIS (Netherlands)

    van Dijck, Gijs

    2016-01-01

    With more and more information disclosed online and with open-access policies on the rise, legal academic research is becoming more accessible. The potential impact of this development is enormous, particularly in areas or jurisdictions where offline information is scarce and where access to

  19. Process of formulating USDA's Expanded Flavonoid Database for the Assessment of Dietary intakes: a new tool for epidemiological research.

    Science.gov (United States)

    Bhagwat, Seema A; Haytowitz, David B; Wasswa-Kintu, Shirley I; Pehrsson, Pamela R

    2015-08-14

    The scientific community continues to be interested in potential links between flavonoid intakes and beneficial health effects associated with certain chronic diseases such as CVD, some cancers and type 2 diabetes. Three separate flavonoid databases (Flavonoids, Isoflavones and Proanthocyanidins) developed by the USDA Agricultural Research Service since 1999 with frequent updates have been used to estimate dietary flavonoid intakes, and investigate their health effects. However, each of these databases contains only a limited number of foods. The USDA has constructed a new Expanded Flavonoids Database for approximately 2900 commonly consumed foods, using analytical values from their existing flavonoid databases (Flavonoid Release 3.1 and Isoflavone Release 2.0) as the foundation to calculate values for all the twenty-nine flavonoid compounds included in these two databases. Thus, the new database provides full flavonoid profiles for twenty-nine predominant dietary flavonoid compounds for every food in the database. Original analytical values in Flavonoid Release 3.1 and Isoflavone Release 2.0 for corresponding foods were retained in the newly constructed database. Proanthocyanidins are not included in the expanded database. The process of formulating the new database includes various calculation techniques. This article describes the process of populating values for the twenty-nine flavonoid compounds for every food in the dataset, along with challenges encountered and resolutions suggested. The new expanded flavonoid database released on the Nutrient Data Laboratory's website would provide uniformity in estimations of flavonoid content in foods and will be a valuable tool for epidemiological studies to assess dietary intakes.

  20. The impact of open access on the medical literature: a review of current literature

    Directory of Open Access Journals (Sweden)

    Nana Turk

    2017-02-01

    Full Text Available Background: the aim of the article is to conduct an overview of the impact of OA on the medical articles based on 3-part categorization.Methods: Data were identified by a search strategy with eight combinations of keywords (open access, citation impact, citation advantage, citation count, article download, article usage, social media attention, altmetrics and searched in three different databases.Results: the analysis was conducted on 107 studies dealing with citations, downloads and social impact. Sixty-seven of them simply employed the counting citations to OA and non-OA articles; nineteen articles compared the downloads and citations counts; and twenty-one articles investigated the social impact of OA articles. Twenty-five articles investigated the citations, download counts, and social impact of medical articles.Conclusions: The studies investigating the citation impact mostly showed citation advantages. Those that employed citation and download counts of medical articles using randomized controlled trials showed that OA articles were downloaded significantly more frequently, but found no evidence of a citation advantage for open access articles. The citation advantage from open access might be caused by other factors. Results of the studies comparing the social media attention and citations/downloads of the medical articles are often diametrically opposed.

  1. Peta Perkembangan Penelitian Pemanfaatan Repositori Institusi Menuju Open Access: Studi Bibliometrik dengan VOSViewer

    Directory of Open Access Journals (Sweden)

    Tupan Tupan

    2016-12-01

    Full Text Available The study is aimed to know the development mapping in using open-access institutional repositories. It has been researched in August 2016 by using scopus databases with keywords: open access and institutional repository. The results findings are descriptively analysed according to publication years, institution and country names, journal names, document types, and research topics. To gather the research development mapping, the data were exported  by using CSV format (Comma Separated Values. These data then being processed and analysed using VOSViewer application program. The study found that the research development mapping have been occurred since 1986. From 2002-2016, the mapping have been significantly increased. The journals that mostly published its trends were OCLC System and Services, Lecture Notes in Computer Science, Grey Journal, Information Services and Use, Liber Quarterly, Library Review, and Serial Librarian. Meanwhile, the most type of documents were articels, conference paper, review, and book chapters. For the topic of research, it is found that open access, institutional repositories, societies and institutions, information services, digital libraries, metadata, and electronic publishing were dominant. The visual network has shown that the relationship among topics can be seen from descriptor lines in each field. The more relation descriptor lines the closest realtionship among documents.

  2. Open Access Papers Have a Greater Citation Advantage in the Author-Pays Model

    Directory of Open Access Journals (Sweden)

    Elaine Sullo

    2016-03-01

    Full Text Available Objective – To investigate the citation performance of open access (OA and toll access (TA papers published in author-pays open access journals. Design – Longitudinal citation analysis. Setting – Publications in Springer and Elsevier’s author-pays open access journals. Subjects – 633 journals published using the author-pays model. This model encompasses both journals where the article processing charge (APC is required and journals in which authors can request open access and voluntarily pay APCs for accepted manuscripts. Methods – The authors identified APC funded journals (journals funded by mandatory author processing charges as well as those where authors voluntarily paid a fee in order to have their articles openly accessible from both Springer and Elsevier, and analyzed papers published in these journals from 2007 to 2011. The authors excluded journals that adopted the APC model later than 2007. To identify Springer titles, the authors created a search strategy to identify open access articles in SpringerLink. A total of 576 journals were identified and double checked in the Sherpa-Romeo database (a database of copyright and open access self-archiving policies of academic journals to verify their open access policies. The authors then downloaded the journal content using SpringerLink, and using Springer Author-Mapper, separated out the open access articles from the toll access articles. In order to identify the Elsevier APC funded journals, the authors referred to “Open Access Journal Directory: A-Z,” which contained 35 OA journals (p. 584. Once the authors consulted “Sponsored articles” issued by Elsevier and verified titles in Sherpa-Romeo, they identified 57 journals that fit the “author-pays” model. The bibliographic information was downloaded and OA articles were separated from TA articles. The authors confirmed that all journals were indeed OA publications by downloading the full-text from off-campus locations

  3. Open access of evidence-based publications: the case of the orthopedic and musculoskeletal literature.

    Science.gov (United States)

    Yammine, Kaissar

    2015-11-01

    The open access model, where researchers can publish their work and make it freely available to the whole medical community, is gaining ground over the traditional type of publication. However, fees are to be paid by either the authors or their institutions. The purpose of this paper is to assess the proportion and type of open access evidence-based articles in the form of systematic reviews and meta-analyses in the field of musculoskeletal disorders and orthopedic surgery. PubMed database was searched and the results showed a maximal number of hits for low back pain and total hip arthroplasty. We demonstrated that despite a 10-fold increase in the number of evidence-based publications in the past 10 years, the rate of free systematic reviews in the general biomedical literature did not change for the last two decades. In addition, the average percentage of free open access systematic reviews and meta-analyses for the commonest painful musculoskeletal conditions and orthopedic procedures was 20% and 18%, respectively. Those results were significantly lower than those of the systematic reviews and meta-analyses in the remaining biomedical research. Such findings could indicate a divergence between the efforts engaged at promoting evidence-based principles and those at disseminating evidence-based findings in the field of musculoskeletal disease and trauma. The high processing fee is thought to be a major limitation when considering open access model for publication. © 2015 Chinese Cochrane Center, West China Hospital of Sichuan University and Wiley Publishing Asia Pty Ltd.

  4. Education Scholars' Perceptions and Practices toward Open Access Publishing

    Science.gov (United States)

    Ellingford, Lori Michelle

    2012-01-01

    Although open access publishing has been available since 1998, we know little regarding scholars' perceptions and practices toward publishing in open access outlets, especially in the social science community. Open access publishing has been slow to penetrate the field of education, yet the potential impact of open access could make this…

  5. An Expanded UV Irradiance Database from TOMS Including the Effects of Ozone, Clouds, and Aerosol Attenuation

    Science.gov (United States)

    Herman, J.; Krotkov, N.

    2003-01-01

    The TOMS UV irradiance database (1978 to 2003) has been expanded to include five new products (noon irradiance at 305,310,324, and 380 nm, and noon erythemal-weighted irradiance), in addition to the existing erythemal daily exposure, that permit direct comparisons with ground-based measurements from spectrometers and broadband instruments. The new data are available on http://toms.gsfc.nasa.gov/>http://toms.gsfc.nasa.gov. Comparisons of the TOMS estimated irradiances with ground-based instruments are given along with a review of the sources of known errors, especially the recent improvements in accounting for aerosol attenuation. Trend estimations from the new TOMS irradiances permit the clear separation of changes caused by ozone and those caused by aerosols and clouds. Systematic differences in cloud cover are shown to be the most important factor in determining regional differences in UV radiation reaching the ground for locations at the same latitude (e.g., the summertime differences between Australia and the US southwest).

  6. First results of the SOAP project. Open access publishing in 2010

    CERN Document Server

    Dallmeier-Tiessen, Suenje; Goerner, Bettina; Hyppoelae, Jenni; Igo-Kemenes, Peter; Kahn, Deborah; Lambert, Simon; Lengenfelder, Anja; Leonard, Chris; Mele, Salvatore; Polydoratou, Panayiota; Ross, David; Ruiz-Perez, Sergio; Schimmer, Ralf; Swaisland, Mark; van der Stelt, Wim

    2010-01-01

    The SOAP (Study of Open Access Publishing) project has compiled data on the present offer for open access publishing in online peer-reviewed journals. Starting from the Directory of Open Access Journals, several sources of data are considered, including inspection of journal web site and direct inquiries within the publishing industry. Several results are derived and discussed, together with their correlations: the number of open access journals and articles; their subject area; the starting date of open access journals; the size and business models of open access publishers; the licensing models; the presence of an impact factor; the uptake of hybrid open access.

  7. The role of libraries in open access institutional repositories.

    Directory of Open Access Journals (Sweden)

    Tony Hernández Peréz

    2008-02-01

    Full Text Available Nowadays, there are more and more institutional repositories in Spain, as in a large number of countries all over the world, which contains thousands of digital objects in open access, full-text, no-charge and available to free download, print or copy. Nearly every repository is managed and mantained by the library services of the institution they serve. This article explains the reasons for the crisis in the scholarly communication model, the alternative model based on open access to scholarly publication, and the crucial role that the libraries can play in the development of their own digital collections, a challenge and a chance that they can't miss.

  8. OECD guidelines on open access: commercialization in disguise?

    Science.gov (United States)

    Hoeyer, Klaus; Svendsen, Mette N; Koch, Lene

    2008-09-01

    The Organisation for Economic Co-operation and Development (OECD) has published a new set of principles and guidelines to promote open access to datasets and results from publicly funded research. However, there is reason to think twice about the implications of making demands for transparency and open access for publicly funded research only. How will such demands affect incentives and research agendas? Might this new regulation of publicly funded research have undesirable effects on the quality and value of research? Placing the OECD guidelines in a broader context of research regulation, we argue that they might provide a further push toward collaboration with commercially sponsored research and reinforce incentive structures that favour the creation of commercial value.

  9. Open access in Australia: an odyssey of sorts?

    Directory of Open Access Journals (Sweden)

    Colin Steele

    2013-11-01

    Full Text Available Scholarly communication change and open access (OA initiatives in Australia have followed an Odyssean path in the last decade. The stop-start nature of early initiatives demonstrates that institutional leadership is essential for the successful deposit of academic content in an institutional repository. Similarly, OA policies from the two Australian Research Councils were delayed for nearly a decade, partly due to publisher pressure and bureaucratic conservatism. More successful has been the development of full, or hybrid, open access university e-presses. These presses, usually embedded in the scholarly infrastructure of the university, provide monographic models for wider global consideration. Australian universities are now reflecting, partly through recent Research Council edicts and monitoring global OA developments, greater awareness of the need for action in scholarly communication change.

  10. LIS Open Access E-Journal - where are you?

    OpenAIRE

    Izabella Taler

    2008-01-01

    Access to published information is of interest to many users. Library and Information Science (LIS) professionals are especially interested in gaining access and guiding users to all available information. Though they are often dependent on traditional subscription-based library resources, moving away from the costly ones and replacing them with usage of available open access sources, presents practitioners with a significant budget consideration in today's shrinking economy. This paper exami...

  11. Open access press vs traditional university presses on Amazon

    OpenAIRE

    McGreal, Rory; Acqua, Edward

    2010-01-01

    This study is a comparison AU Press with three other traditional (non-open access) Canadian university presses. The analysis is based on actual physical book sales on Amazon.com and Amazon.ca. Statistical methods include the sampling of the sales ranking of randomly selected books from each press. Results suggest that there is no significant difference in the ranking of printed books sold by AU Press in comparison with traditional university presses. However, AU Press, can demonstrate a signi...

  12. RECODE: Policy recommendations for open access to research data

    OpenAIRE

    Tsoukala, Victoria; Angelaki, Marina; Kalaitzi, Vasso; Wessels, Bridgette; Price, Lada; Taylor, Mark J.; Smallwood, Rod; Linde, Peter; Sondervan, Jeroen; Reilly, Susan; Noorman, Merel; Wyatt, Sally; Bigagli, Lorenzo; Finn, Rachel; Sveinsdottir, Thordis

    2016-01-01

    These policy recommendations are a deliverable from the EC FP7 funded RECODE project (2012-2014), which aimed at assisting stakeholders within the scholarly communications ecosystem, e.g., policy makers, research funders, data managers, and publishers, to implement open access to research data. The recommendations, which are a product of research, analysis and stakeholder consultations, provide both over-arching and stakeholder specific guidance. While a consensus is observed amongst many...

  13. Open Access: there is something you can do…

    CERN Multimedia

    Jens Vigen

    2014-01-01

    Since the very beginning, CERN has put a lot of emphasis on the fact that its scientific output should be accessible to everyone. Today, on average, around 10% of articles are published Open Access worldwide. However, that figure is much lower when the proceedings of conferences, including those held at CERN, are taken into account.   The CERN Convention reads: “…and the results of its experimental and theoretical work shall be published or otherwise made generally available”. There is little doubt that if this had been written today, it would have explicitly mentioned that our results should be published Open Access. This is indeed what has happened as CERN has moved into the LHC era: a little known fact is that all LHC physics results have been published Open Access and can be read in their final form by anybody with an Internet connection. Most importantly, this information can be re-used thanks to Creative Commons licenses, which is not the case for conventional...

  14. Open Access and Authors’ Rights Management: A Possibility for Theology?

    Directory of Open Access Journals (Sweden)

    Kevin L. Smith

    2009-05-01

    Full Text Available Several academic disciplines have begun to understand the benefits of open access to scholarship, both for scholars and for the general public. Scientific disciplines have led the way, partially due to the nature of scholarship in those areas and partially because they have felt the crisis in serials pricing more acutely than others. Theological studies, however, have largely been insulated from the push for open access; considering the reasons for that is the first task of this article. It is also the case, however, that the missionary impulse that stands behind much theological scholarship is a strong incentive to embrace the opportunities afforded by digital, online dissemination of research and writing. After discussing this imperative for global distribution, the bulk of the article focuses on how theological institutions, and especially their libraries, can encourage and support scholars in making their work freely accessible. Copyright issues, including the elements of a successful copyright management program, are discussed, as are some of the technological elements necessary for an efficient and discoverable open access repository. Options for licensing, both at ingestion of content and at dissemination to users are also considered. Finally, it is argued that the role of consortia and professional organizations in supporting these initiatives is especially important because of the relatively small size of so many theological institutions.

  15. Making the innovation case in Open Access scholary communication

    CERN Multimedia

    CERN. Geneva

    2005-01-01

    It seems almost unnecessary to have to elaborate additional reasons for the adoption of Open Access scholarly communication (OA sc) as manifested through Open Access journals and self-archiving practices. To those active within the OA arena, the case has been convincingly made, and current arguments merely need to be disseminated beyond the Library and Information Science (LIS) sphere. However, it is my contention that a convincing argument for OA sc needs to be launched from the Science Policy perspective if any government mandated pro-OA policy changes are to be effected. This paper, then, is an attempt at taking the OA discussion beyond the LIS arena and into the realm of Science and Innovation Policy. Using Innovation Theory as its theoretical framework, it is argued that Open Access scholarly communication can only serve to bolster Innovation Systems, be they national, regional, or sectoral. The case of South Africa is taken as an illustrative example, though the case can and will be generalised to beyon...

  16. Integration of open access literature into the RCSB Protein Data Bank using BioLit.

    Science.gov (United States)

    Prlić, Andreas; Martinez, Marco A; Dimitropoulos, Dimitris; Beran, Bojan; Yukich, Benjamin T; Rose, Peter W; Bourne, Philip E; Fink, J Lynn

    2010-04-29

    Biological data have traditionally been stored and made publicly available through a variety of on-line databases, whereas biological knowledge has traditionally been found in the printed literature. With journals now on-line and providing an increasing amount of open access content, often free of copyright restriction, this distinction between database and literature is blurring. To exploit this opportunity we present the integration of open access literature with the RCSB Protein Data Bank (PDB). BioLit provides an enhanced view of articles with markup of semantic data and links to biological databases, based on the content of the article. For example, words matching to existing biological ontologies are highlighted and database identifiers are linked to their database of origin. Among other functions, it identifies PDB IDs that are mentioned in the open access literature, by parsing the full text for all research articles in PubMed Central (PMC) and exposing the results as simple XML Web Services. Here, we integrate BioLit results with the RCSB PDB website by using these services to find PDB IDs that are mentioned in research articles and subsequently retrieving abstract, figures, and text excerpts for those articles. A new RCSB PDB literature view permits browsing through the figures and abstracts of the articles that mention a given structure. The BioLit Web Services that are providing the underlying data are publicly accessible. A client library is provided that supports querying these services (Java). The integration between literature and websites, as demonstrated here with the RCSB PDB, provides a broader view for how a given structure has been analyzed and used. This approach detects the mention of a PDB structure even if it is not formally cited in the paper. Other structures related through the same literature references can also be identified, possibly providing new scientific insight. To our knowledge this is the first time that database and

  17. Integration of open access literature into the RCSB Protein Data Bank using BioLit

    Directory of Open Access Journals (Sweden)

    Bourne Philip E

    2010-04-01

    Full Text Available Abstract Background Biological data have traditionally been stored and made publicly available through a variety of on-line databases, whereas biological knowledge has traditionally been found in the printed literature. With journals now on-line and providing an increasing amount of open access content, often free of copyright restriction, this distinction between database and literature is blurring. To exploit this opportunity we present the integration of open access literature with the RCSB Protein Data Bank (PDB. Results BioLit provides an enhanced view of articles with markup of semantic data and links to biological databases, based on the content of the article. For example, words matching to existing biological ontologies are highlighted and database identifiers are linked to their database of origin. Among other functions, it identifies PDB IDs that are mentioned in the open access literature, by parsing the full text for all research articles in PubMed Central (PMC and exposing the results as simple XML Web Services. Here, we integrate BioLit results with the RCSB PDB website by using these services to find PDB IDs that are mentioned in research articles and subsequently retrieving abstract, figures, and text excerpts for those articles. A new RCSB PDB literature view permits browsing through the figures and abstracts of the articles that mention a given structure. The BioLit Web Services that are providing the underlying data are publicly accessible. A client library is provided that supports querying these services (Java. Conclusions The integration between literature and websites, as demonstrated here with the RCSB PDB, provides a broader view for how a given structure has been analyzed and used. This approach detects the mention of a PDB structure even if it is not formally cited in the paper. Other structures related through the same literature references can also be identified, possibly providing new scientific insight. To our

  18. Medical education and information literacy in the era of open access.

    Science.gov (United States)

    Brower, Stewart M

    2010-01-01

    The Open Access movement in scholarly communications poses new issues and concerns for medical education in general and information literacy education specifically. For medical educators, Open Access can affect the availability of new information, instructional materials, and scholarship in medical education. For students, Open Access materials continue to be available to them post-graduation, regardless of affiliation. Libraries and information literacy librarians are challenged in their responses to the Open Access publishing movement in how best to support Open Access endeavors within their own institutions, and how best to educate their user base about Open Access in general.

  19. A unique linkage of administrative and clinical registry databases to expand analytic possibilities in pediatric heart transplantation research.

    Science.gov (United States)

    Godown, Justin; Thurm, Cary; Dodd, Debra A; Soslow, Jonathan H; Feingold, Brian; Smith, Andrew H; Mettler, Bret A; Thompson, Bryn; Hall, Matt

    2017-12-01

    Large clinical, research, and administrative databases are increasingly utilized to facilitate pediatric heart transplant (HTx) research. Linking databases has proven to be a robust strategy across multiple disciplines to expand the possible analyses that can be performed while leveraging the strengths of each dataset. We describe a unique linkage of the Scientific Registry of Transplant Recipients (SRTR) database and the Pediatric Health Information System (PHIS) administrative database to provide a platform to assess resource utilization in pediatric HTx. All pediatric patients (1999-2016) who underwent HTx at a hospital enrolled in the PHIS database were identified. A linkage was performed between the SRTR and PHIS databases in a stepwise approach using indirect identifiers. To determine the feasibility of using these linked data to assess resource utilization, total and post-HTx hospital costs were assessed. A total of 3188 unique transplants were identified as being present in both databases and amenable to linkage. Linkage of SRTR and PHIS data was successful in 3057 (95.9%) patients, of whom 2896 (90.8%) had complete cost data. Median total and post-HTx hospital costs were $518,906 (IQR $324,199-$889,738), and $334,490 (IQR $235,506-$498,803) respectively with significant differences based on patient demographics and clinical characteristics at HTx. Linkage of the SRTR and PHIS databases is feasible and provides an invaluable tool to assess resource utilization. Our analysis provides contemporary cost data for pediatric HTx from the largest US sample reported to date. It also provides a platform for expanded analyses in the pediatric HTx population. Copyright © 2017 Elsevier Inc. All rights reserved.

  20. Open access e-books: the role of the institution

    Directory of Open Access Journals (Sweden)

    Paul Ayris

    2014-04-01

    Full Text Available This article explains the policy position taken by University College London (UCL in establishing the UCL Press. It sets the creation of the Press against the background of national open access (OA policy development in the UK. UCL Press, repatriated from a commercial provider, was relaunched as an OA press as part of UCL Library Services on 1 August 2013. The Press will publish both OA electronic journals and OA monographs, with a particular emphasis in the latter on the arts, humanities and social sciences. UCL is largely funding Press activity from its own internal funds, seeing OA as an opportunity rather than a threat.

  1. Open Access Articles Have a Greater Research Impact Than Articles Not Freely Available, A review of: Antelman, Kristin. “Do Open-Access Articles Have a Greater Research Impact?” College & Research Libraries 65.5 (Sep. 2004: 372-82.

    Directory of Open Access Journals (Sweden)

    Suzanne P. Lewis

    2006-09-01

    Full Text Available Objective – To ascertain whether open access articles have a greater research impact than articles not freely available, as measured by citations in the ISI Web of Science database. Design – Analysis of mean citation rates of a sample population of journal articles across four disciplines. Setting – Journal literature across the disciplines of philosophy, political science, mathematics, and electrical and electronic engineering. Subjects – A sample of 2,017 articles across the four disciplines published between 2001 and 2002 (for political science, mathematics, and electrical and electronic engineering and between 1999 and 2000 (for philosophy. Methods – A systematic presample of articles for each of the disciplines was taken to calculate the necessary sample sizes. Based on this calculation, articles were sourced from ten leading journals in each discipline. The leading journals in political science, mathematics, and electrical and electronic engineering were defined by ISI’s Journal Citation Reports for 2002. The ten leading philosophy journals were selected using a combination of other methods. Once the sample population had been identified, each article title and the number of citations to each article (in the ISI Web of Science database were recorded. Then the article title was searched in Google and if any freely available full text version was found, the article was classified as open access. The mean citation rate for open access and non‐open access articles in each discipline was identified, and the percentage difference between the means was calculated. Main results – The four disciplines represented a range of open access uptake: 17% of articles in philosophy were open access, 29% in political science, 37% in electrical and electronic engineering, and 69% in mathematics. There was a significant difference in the mean citation rates for open access articles and non‐open access articles in all four disciplines. The

  2. Open Source, Open Access, Open Review, Open Data. Initiativen zu mehr Offenheit in der digitalen Welt

    OpenAIRE

    Herb, Ulrich

    2011-01-01

    The article discusses the principles of openess, open access and open availability of information based on the examples of open access to scientific information, open government data, open geographical data and open source software.

  3. Open access for ALICE analysis based on virtualization technology

    Science.gov (United States)

    Buncic, P.; Gheata, M.; Schutz, Y.

    2015-12-01

    Open access is one of the important leverages for long-term data preservation for a HEP experiment. To guarantee the usability of data analysis tools beyond the experiment lifetime it is crucial that third party users from the scientific community have access to the data and associated software. The ALICE Collaboration has developed a layer of lightweight components built on top of virtualization technology to hide the complexity and details of the experiment-specific software. Users can perform basic analysis tasks within CernVM, a lightweight generic virtual machine, paired with an ALICE specific contextualization. Once the virtual machine is launched, a graphical user interface is automatically started without any additional configuration. This interface allows downloading the base ALICE analysis software and running a set of ALICE analysis modules. Currently the available tools include fully documented tutorials for ALICE analysis, such as the measurement of strange particle production or the nuclear modification factor in Pb-Pb collisions. The interface can be easily extended to include an arbitrary number of additional analysis modules. We present the current status of the tools used by ALICE through the CERN open access portal, and the plans for future extensions of this system.

  4. LHC data to be made public via Open Access initiative

    CERN Multimedia

    Achintya Rao

    2013-01-01

    CMS has collected around 64 petabytes of analysable proton-proton data so far. Along with published papers, these data constitute the scientific legacy of the CMS collaboration, and preserving the data for future generations is crucial.   High-school students analysing CMS data. Image: Marzena Lapka. “To preserve not only the data but also the information on how to use them, we intend to make available through open access our data that are no longer under active analysis,” says Kati Lassila-Perini, head of the CMS Data Preservation and Open Access project at the Helsinki Institute of Physics. Although providing open scientific data allows potentially everyone to perform their own analyses, doing so is very difficult. CMS scientists working in groups take many months or even years to perform a single analysis. Each analysis must be scrutinised by the whole collaboration before a scientific paper can be published. CMS therefore decided to launch a pilot project for its ope...

  5. Open Access Article Processing Charges: DOAJ Survey May 2014

    Directory of Open Access Journals (Sweden)

    Heather Morrison

    2015-02-01

    Full Text Available As of May 2014, the Directory of Open Access Journals (DOAJ listed close to ten thousand fully open access, peer reviewed, scholarly journals. Most of these journals do not charge article processing charges (APCs. This article reports the results of a survey of the 2567 journals, or 26% of journals listed in DOAJ, that do have APCs based on a sample of 1432 of these journals. Results indicate a volatile sector that would make future APCs difficult to predict for budgeting purposes. DOAJ and publisher title lists often did not closely match. A number of journals were found on examination not to have APCs. A wide range of publication costs was found for every publisher type. The average (mean APC of $964 contrasts with a mode of $0. At least 61% of publishers using APCs are commercial in nature, while many publishers are of unknown types. The vast majority of journals charging APCs (80% were found to offer one or more variations on pricing, such as discounts for authors from mid to low income countries, differential pricing based on article type, institutional or society membership, and/or optional charges for extras such as English language editing services or fast track of articles. The complexity and volatility of this publishing landscape is discussed.

  6. Open Access Publishing in High-Energy Physics

    CERN Document Server

    Mele, S

    2007-01-01

    The goal of Open Access (OA) is to grant anyone, anywhere and anytime free access to the results of scientific research. The High- Energy Physics (HEP) community has pioneered OA with its "pre-print culture": the mass mailing, first, and the online posting, later, of preliminary versions of its articles. After almost half a century of widespread dissemination of pre-prints, the time is ripe for the HEP community to explore OA publishing. Among other possible models, a sponsoring consortium appears as the most viable option for a transition of HEP peer-reviewed literature to OA. A Sponsoring Consortium for Open Access Publishing in Particle Physics (SCOAP3) is proposed as a central body which would remunerate publishers for the peer-review service, effectively replacing the "reader-pays" model of traditional subscriptions with an "author-side" funding. Funding to SCOAP3 would come from HEP funding agencies and library consortia through a re-direction of subscriptions. This model is discussed in details togethe...

  7. Measuring Research Impact in an Open Access Environment

    Directory of Open Access Journals (Sweden)

    Frank Scholze

    2007-11-01

    Full Text Available This paper focuses on electronic publication impact as a limited, but rather well defined sub-field of research impact. With Open Access, a much bigger corpus of data has become available for statistical analysis. Publication impact can be measured by author- or reader-generated data. Author-generated data would be citations. Reader-generated data would be usage. Usage data can be collected through webserver or linkresolver logs. It has to be normalized in order to be shared and analysed meaningfully. The paper presents current initiatives and projects aiming to provide a suitable infrastructure, including publisher data (COUNTER/SUSHI and data collected from Open Access repositories (using OAI-PMH and OpenURL ContextObjects. Citation and usage data can be analyzed quantitatively or structurally. These new metrics can enhance or complement existing metrics like the Journal Impact Factor (JIF. Services like decision support systems for collection management or recommender systems can also be built on this metrics.

  8. Open access and connectedness: stimulating unexpected innovation through the use of institutional open archives

    OpenAIRE

    van Reenen, Johann

    2006-01-01

    The author reviews past work with Ibict and the global progress made by the Open Access Movement. He postulates a theory of open access being an example of a complex adaptive system created by Internet-based scholarly publishing. Open access could be the cause of a cascade of increasing complexity and opportunities that will reshape this system. He has chosen the pervasive and global "Connectedness" created by the internet and the content spaces it provides for open access collections as a "s...

  9. A Bibliometric Study of Scholarly Articles Published by Library and Information Science Authors about Open Access

    Science.gov (United States)

    Grandbois, Jennifer; Beheshti, Jamshid

    2014-01-01

    Introduction: This study aims to gain a greater understanding of the development of open access practices amongst library and information science authors, since their role is integral to the success of the broader open access movement. Method: Data were collected from scholarly articles about open access by library and information science authors…

  10. Open Access Theses in Institutional Repositories: An Exploratory Study of the Perceptions of Doctoral Students

    Science.gov (United States)

    Stanton, Kate Valentine; Liew, Chern Li

    2011-01-01

    Introduction: We examine doctoral students' awareness of and attitudes to open access forms of publication. Levels of awareness of open access and the concept of institutional repositories, publishing behaviour and perceptions of benefits and risks of open access publishing were explored. Method: Qualitative and quantitative data were collected…

  11. Open Access, Open Source and Digital Libraries: A Current Trend in University Libraries around the World

    Science.gov (United States)

    Krishnamurthy, M.

    2008-01-01

    Purpose: The purpose of this paper is to describe the open access and open source movement in the digital library world. Design/methodology/approach: A review of key developments in the open access and open source movement is provided. Findings: Open source software and open access to research findings are of great use to scholars in developing…

  12. Development of USDA's expanded flavonoid database: A Tool for Epidemiological Research

    Science.gov (United States)

    The scientific community continues to be interested in potential links between flavonoid intakes and beneficial health effects associated with certain chronic diseases such as cardiovascular diseases, some cancers and type 2 diabetes. Three separate flavonoid databases (Flavonoids (5 subclasses: fl...

  13. A Study of Innovative Features in Scholarly Open Access Journals

    Science.gov (United States)

    2011-01-01

    Background The emergence of the Internet has triggered tremendous changes in the publication of scientific peer-reviewed journals. Today, journals are usually available in parallel electronic versions, but the way the peer-review process works, the look of articles and journals, and the rigid and slow publication schedules have remained largely unchanged, at least for the vast majority of subscription-based journals. Those publishing firms and scholarly publishers who have chosen the more radical option of open access (OA), in which the content of journals is freely accessible to anybody with Internet connectivity, have had a much bigger degree of freedom to experiment with innovations. Objective The objective was to study how open access journals have experimented with innovations concerning ways of organizing the peer review, the format of journals and articles, new interactive and media formats, and novel publishing revenue models. Methods The features of 24 open access journals were studied. The journals were chosen in a nonrandom manner from the approximately 7000 existing OA journals based on available information about interesting journals and include both representative cases and highly innovative outlier cases. Results Most early OA journals in the 1990s were founded by individual scholars and used a business model based on voluntary work close in spirit to open-source development of software. In the next wave, many long-established journals, in particular society journals and journals from regions such as Latin America, made their articles OA when they started publishing parallel electronic versions. From about 2002 on, newly founded professional OA publishing firms using article-processing charges to fund their operations have emerged. Over the years, there have been several experiments with new forms of peer review, media enhancements, and the inclusion of structured data sets with articles. In recent years, the growth of OA publishing has also been

  14. Open access – deus ex machina for publishing scholarly journals?

    Directory of Open Access Journals (Sweden)

    Ivana Hebrang Grgić

    2015-09-01

    Full Text Available The article describes the evolution of scholarly communication through scholarly journals. It gives a short overview of the historical development, starting from the first journals in the 17th century to problems in the 20th century (such as increase in the number of journals, problems of accessibility, visibility, and journal access crisis. The open access (OA movement is described. It arose from the “old tradition” facing new technologies and was supposed to be the solution to the journal crisis that culminated in 1990s. The idea, defined in the Budapest Open Access Initiative, was to assure free and unrestricted online availability of peer-reviewed journal literature. The beginnings of formal scholarly communication, back in 1665, had similar ideas of making research results available to the widest possible public. The idea was excellent – removing access barriers would increase visibility, impact and quality of research. Research has shown that OA articles have better impact and visibility (Lawrence, Brody, Harnad, Haajem, etc.. However, publishing scientific information has its costs. New models have been developed, some of them causing new restrictions and barriers. The most popular model is the author-pays model (article processing charges, APC – if authors can afford to pay the processing charges, their work is published and thus more visible and more citable. However, if they cannot, a new problem arises – some research results, although valuable, are not published in open access and therefore they have lower visibility and impact. Another problem is the phenomenon of the so-called predatory publishers. Those publishers use the APC model but neglect quality control mechanisms in order to make profit. Their criteria for publishing are not positive peer-reviews but payments made by authors or their institutions. Predatory publishers’ practices are not only unethical, but also illegal, and they are a great threat to the

  15. Towards the Adoption of Open Source and Open Access Electronic Health Record Systems

    Directory of Open Access Journals (Sweden)

    Ilias Maglogiannis

    2012-01-01

    Full Text Available As the Electronic Health Record (EHR systems constantly expand to support more clinical activities and their implementations in healthcare organizations become more widespread, several communities have been working intensively for several years to develop open access and open source EHR software, aiming at reducing the costs of EHR deployment and maintenance. In this paper, we describe and evaluate the most popular open source electronic medical records such as openEMR, openMRS and patientOS, providing their technical features and potentials. These systems are considered quite important due to their prevalence. The article presents the key features of each system and outlines the advantages and problems of Open Source Software (OSS Systems through a review of the literature, in order to demonstrate the possibility of their adoption in modern electronic healthcare systems. Also discussed are the future trends of OS EHRs in the context of the Personal Health Records and mobile computing paradigm.

  16. Open access for ALICE analysis based on virtualization technology

    CERN Document Server

    Buncic, P; Schutz, Y

    2015-01-01

    Open access is one of the important leverages for long-term data preservation for a HEP experiment. To guarantee the usability of data analysis tools beyond the experiment lifetime it is crucial that third party users from the scientific community have access to the data and associated software. The ALICE Collaboration has developed a layer of lightweight components built on top of virtualization technology to hide the complexity and details of the experiment-specific software. Users can perform basic analysis tasks within CernVM, a lightweight generic virtual machine, paired with an ALICE specific contextualization. Once the virtual machine is launched, a graphical user interface is automatically started without any additional configuration. This interface allows downloading the base ALICE analysis software and running a set of ALICE analysis modules. Currently the available tools include fully documented tutorials for ALICE analysis, such as the measurement of strange particle production or the nuclear modi...

  17. Co-operating for gold open access without APCs

    Directory of Open Access Journals (Sweden)

    Martin Paul Eve

    2015-03-01

    Full Text Available While article processing charges (APCs are emerging as a key way in which existing publishers can adapt to gold open access (OA, this mode is problematic in many ways. Considering the existing subscription publication ecosystem as a risk/cost-pooling mechanism leads to the conclusion that APCs are a concentration of risk that may come with damaging institutional consequences, particularly in the humanities disciplines. Consortial and co-operative modes of funding gold OA, however, do not come with these drawbacks but are susceptible to ‘free riders’. In this article, the theoretical backdrop to these models is addressed and the range of current offerings evaluated. Noting that classical economic incentives do not seem to operate in a world of inter-library loans, the article ends with a description of the model that is being implemented for the 'Open Library of Humanities' initiative, funded by the Andrew W Mellon Foundation.

  18. Symmetry – An International and Interdisciplinary Scientific Open Access Journal

    Directory of Open Access Journals (Sweden)

    Shu-Kun Lin

    2009-06-01

    Full Text Available As the publisher of MDPI journals, I am pleased to launch Symmetry (ISSN 2073-8994, an international and interdisciplinary open access scientific journal. Twenty years ago, a journal entitled Symmetry – An Interdisciplinary and International Journal was launched by VCH Publishers, Inc. in New York, with Professor Istvan Hargittai as Editor-in-Chief. I submitted a paper which was processed by Professor Sven J. Cyvin from The University of Trondheim – The Norwegian Institute of Technology. The paper was accepted and scheduled for publication in the printed issue 4 of volume 1, 1990. I still keep a copy of the galley proofs. However, the publication of this journal was terminated after just the release of the first issue of volume 1, and this paper was finally published elsewhere [1]. [...

  19. Open Access to the LHC takes on a new meaning

    CERN Multimedia

    2008-01-01

    Complete scientific documentation on the LHC machine and detectors is now freely available on the Web. The ATLAS collaboration, shown here, contributed to the 1,600-page scientific documentation of the LHC, along with staff from the other five detectors and the LHC machine.Now that the LHC tunnel and the experimental caverns are shut down for public visits, "Open Access to the LHC" has taken on an entirely new meaning. Last Thursday, 14 August, seven major articles were published electronically in a special issue of the Journal of Instrumentation (JINST). Together they form the complete scientific documentation on the design and construction of the LHC machine and the six detectors (ALICE, ATLAS, CMS, LHCb, LHCf and TOTEM), and thus on the entire LHC project, well before start-up on 10 September. For many years to come, these papers will serve as key references for the stream of scientific results that will begin to emerge from the ...

  20. The Azimuth Project: an Open-Access Educational Resource

    Science.gov (United States)

    Baez, J. C.

    2012-12-01

    The Azimuth Project is an online collaboration of scientists, engineers and programmers who are volunteering their time to do something about a wide range of environmental problems. The project has several aspects: 1) a wiki designed to make reliable, sourced information easy to find and accessible to a technically literate nonexperts, 2) a blog featuring expository articles and news items, 3) a project to write programs that explain basic concepts of climate physics and illustrate principles of good open-source software design, and 4) a project to develop mathematical tools for studying complex networked systems. We discuss the progress so far and some preliminary lessons. For example, enlisting the help of experts outside academia highlights the problems with pay-walled journals and the benefits of open access, as well as differences between how software development is done commercially, in the free software community, and in academe.

  1. Wie wird GMS Medizin – Bibliothek – Information genutzt? Analyse der Zugriffszahlen einer Open Access-Zeitschrift / Usage of "GMS Medizin – Bibliothek – Information": analysis of usage data from an Open Access journal

    Directory of Open Access Journals (Sweden)

    Bauer, Bruno

    2008-12-01

    Full Text Available In 2006 the journal "MEDIZIN – BIBLIOTHEK – INFORMATION" changed from the internet platform of the "Arbeitsgemeinschaft für Medizinisches Bibliothekswesen" (AGMB to the Open Access platform German Medical Science (GMS. The printed journal version ceased. Thitherto it was sent to all members of the AGMB. The editorial staff made a few arrangements in order to support acceptance and perceptibility of this journal, now issued electronic only. The published papers were included in the database of the Deutsches Bibliothekswesen (DABI and in the Directory of Open Access Journals (DOAJ Content. Furthermore current articles were introduced in MEDINFO, a weblog for medical librarians. The paper compares usage data trends from September 2005 to May 2008 for selected articles.

  2. Research Articles about Open Access Indexed by Scopus: A Content Analysis

    Directory of Open Access Journals (Sweden)

    Rosângela Schwarz Rodrigues

    2016-10-01

    Full Text Available This study analyzes research articles about open access (OA indexed by the Scopus database, published from 2001 to 2015, in order to: (a propose a categorization scheme about OA; (b categorize the scientific production about OA; and (c identify research trends on OA through disciplines at international level over time. The authors used descriptive statistical methods and deductive content analysis using an unconstrained matrix in 347 selected research articles. The most explored themes were found to be “overview, current state, and growth of OA” counting for 98 articles (28.2%, and “awareness, perceptions, and attitudes toward OA” for 75 articles (21.6%. As a conclusion, this study reveals a continuous and growing research interest by the OA community in studies focused on case studies regarding the development or evolution of OA in relation to certain groups, institutions, regions, periods, and how different actors perceive and address the OA movement.

  3. Predatory Open Access Publishers and other Dangers to Today’s Scientific Community

    Directory of Open Access Journals (Sweden)

    Zdeněk Smutný

    2015-12-01

    Full Text Available The aim of this paper is to introduce a summary and current state of the issue of predatory open access publishers and to critically discuss general predatory behaviour and related topics in the Czech and international context. The article summarizes outputs of the first foreign studies dealing with predatory publishers and journals. We find that although in the past three years, the issue of predation is actively addressed in foreign countries, the Czech higher education institutions are not prepared for this new phenomenon as well as most of academics and researchers do not know about it at all. The text highlights the threats with which the scientific community (science and education in general is confronted and proposes countermeasures from the view of an individual and higher education institutions. At the end of the article, there are mentioned trends in the behaviour of predatory publishers and dilemmas which non-predatory journal publishers and international indexing databases are faced with.

  4. Nuclear Receptor Signaling Atlas: Opening Access to the Biology of Nuclear Receptor Signaling Pathways.

    Directory of Open Access Journals (Sweden)

    Lauren B Becnel

    Full Text Available Signaling pathways involving nuclear receptors (NRs, their ligands and coregulators, regulate tissue-specific transcriptomes in diverse processes, including development, metabolism, reproduction, the immune response and neuronal function, as well as in their associated pathologies. The Nuclear Receptor Signaling Atlas (NURSA is a Consortium focused around a Hub website (www.nursa.org that annotates and integrates diverse 'omics datasets originating from the published literature and NURSA-funded Data Source Projects (NDSPs. These datasets are then exposed to the scientific community on an Open Access basis through user-friendly data browsing and search interfaces. Here, we describe the redesign of the Hub, version 3.0, to deploy "Web 2.0" technologies and add richer, more diverse content. The Molecule Pages, which aggregate information relevant to NR signaling pathways from myriad external databases, have been enhanced to include resources for basic scientists, such as post-translational modification sites and targeting miRNAs, and for clinicians, such as clinical trials. A portal to NURSA's Open Access, PubMed-indexed journal Nuclear Receptor Signaling has been added to facilitate manuscript submissions. Datasets and information on reagents generated by NDSPs are available, as is information concerning periodic new NDSP funding solicitations. Finally, the new website integrates the Transcriptomine analysis tool, which allows for mining of millions of richly annotated public transcriptomic data points in the field, providing an environment for dataset re-use and citation, bench data validation and hypothesis generation. We anticipate that this new release of the NURSA database will have tangible, long term benefits for both basic and clinical research in this field.

  5. Open Access Publishing - A Challenge for Russian Psychology

    Directory of Open Access Journals (Sweden)

    BORIS B. VELICHKOVSKY

    2009-06-01

    Full Text Available Publication practices in Russian psychology have changed a lot since the break-up of the Soviet Union, but still differ substantially from those in the Western countries. In the last decade, an exponen-tial growth of the number of scientific psychological journals was observed, but in general, scientific publishing is not a profitable business in Russia. There is a lot of variability in the accessibility and quality of the journals. In sum, psychological publishing in today’s Russia is not well developed. Open access (OA publishing technologies seem to bring clear benefits to Russian psychology, but there are some problems that prevent their ready acceptance. First, there is a linguistic problem – Russian read-ers and writers have bad command of foreign languages. Second, there is a problem of background – Russian readers and writers are not used to Western-style research papers. Third, there is an economic problem – it is unclear, whether Russian universities and funding agencies will ever be ready to support publications in OA-journals. Thus, self-archiving and no-fee OA seem to be the most obvious ways to introduce OA to Russian psychologists.

  6. Growth of hybrid open access, 2009–2016

    Directory of Open Access Journals (Sweden)

    Bo-Christer Björk

    2017-09-01

    Full Text Available Hybrid Open Access is an intermediate form of OA, where authors pay scholarly publishers to make articles freely accessible within journals, in which reading the content otherwise requires a subscription or pay-per-view. Major scholarly publishers have in recent years started providing the hybrid option for the vast majority of their journals. Since the uptake usually has been low per journal and scattered over thousands of journals, it has been very difficult to obtain an overview of how common hybrid articles are. This study, using the results of earlier studies as well as a variety of methods, measures the evolution of hybrid OA over time. The number of journals offering the hybrid option has increased from around 2,000 in 2009 to almost 10,000 in 2016. The number of individual articles has in the same period grown from an estimated 8,000 in 2009 to 45,000 in 2016. The growth in article numbers has clearly increased since 2014, after some major research funders in Europe started to introduce new centralized payment schemes for the article processing charges (APCs.

  7. Open Access Data in Polar and Cryospheric Remote Sensing

    Directory of Open Access Journals (Sweden)

    Allen Pope

    2014-07-01

    Full Text Available This paper aims to introduce the main types and sources of remotely sensed data that are freely available and have cryospheric applications. We describe aerial and satellite photography, satellite-borne visible, near-infrared and thermal infrared sensors, synthetic aperture radar, passive microwave imagers and active microwave scatterometers. We consider the availability and practical utility of archival data, dating back in some cases to the 1920s for aerial photography and the 1960s for satellite imagery, the data that are being collected today and the prospects for future data collection; in all cases, with a focus on data that are openly accessible. Derived data products are increasingly available, and we give examples of such products of particular value in polar and cryospheric research. We also discuss the availability and applicability of free and, where possible, open-source software tools for reading and processing remotely sensed data. The paper concludes with a discussion of open data access within polar and cryospheric sciences, considering trends in data discoverability, access, sharing and use.

  8. A New Open Access Journal of Marine Science and Engineering

    Directory of Open Access Journals (Sweden)

    Anthony S. Clare

    2013-03-01

    Full Text Available The oceans cover approximately 71% of the Earth’s surface and contain more than 97% of the planet’s water, representing over 100 times more liveable volume than the terrestrial habitat. Approximately fifty percent of the species on the planet occupy this ocean biome, much of which remains unexplored. The health and sustainability of the oceans are threatened by a combination of pressures associated with climate change and the ever-increasing demands we place on them for food, recreation, trade, energy and minerals. The biggest threat, however, is the pace of change to the oceans, e.g., ocean acidification, which is unprecedented in human history. Consequently, there has never been a greater need for the rapid and widespread dissemination of the outcomes of research aimed at improving our understanding of how the oceans work and solutions to their sustainable use. It is our hope that this new online, open-access Journal of Marine Science and Engineering will go some way to fulfilling this need. [...

  9. Open Access, Library Subscriptions, and Article Processing Charges

    KAUST Repository

    Vijayakumar, J.K.

    2016-05-01

    Hybrid journals contains articles behind a pay-wall to be subscribed, as well as papers made open access when author pays article processing charge (APC). In such cases, an Institution will end up paying twice and Publishers tend to double-dip. Discussions and pilot models are emerging on pricing options, such as “offset pricing,” [where APCs are adjusted or discounted with subscription costs as vouchers or reductions in next year subscriptions, APCs beyond the subscription costs are modestly capped etc] and thus reduce Institutions’ cost. This presentation will explain different models available and how can we attain a transparent costing structure, where the scholarly community can feel the fairness in Publishers’ pricing mechanisms. Though most of the offset systems are developed through national level or consortium level negotiations, experience of individual institutions, like KAUST that subscribe to large e-journals collections, is important in making right decisions on saving Institutes costs and support openness in scholarly communications.

  10. Opening access to African scholarly content: Stellenbosch University's AOARI platforms

    Directory of Open Access Journals (Sweden)

    Dr Reggie Raju

    2013-03-01

    Full Text Available Africa is viewed as a consumer of the world's knowledge production. A significant factor influencing this status is the low research output, with the main contributor to this status being minimum access to scholarly content to support research. Stellenbosch University, a leading research institution on the African continent, is committed to contributing to changing this status quo through the distribution of its own research output utilizing open sources. Given the challenges that have plagued Africa in developing processes for the distribution of their research, Stellenbosch University has developed the African Open Access Repository Initiative (AOARI which uses open source software for two platforms that support the ‘green’ and ‘gold’ route to sharing scholarly literature: Ubuntu is used as the operating system, DSpace is used for its repository and Open Journal Systems for its publication platform. It is anticipated that AOARI will be the bridge that facilitates the sharing of research output and nurtures a culture of research production in Africa.

  11. Library support for open access journal publishing: a needs analysis

    Directory of Open Access Journals (Sweden)

    Alice Keller

    2015-11-01

    Full Text Available The aim of this study was to establish the role of academic libraries in the context of open access (OA journal publishing, based on the perceived needs of the journals and/or their editors. As a study sample, 14 OA journals affiliated to the University of Zürich, Switzerland, were taken. They were very different in nature, ranging from well-established society journals to newly founded titles launched by dedicated individuals. The study comprised two approaches: a comprehensive journal assessment and subsequent editor interviews. The journal assessments evaluated the functionalities, ease of use, sustainability and visibility of the journal. The interviews were used to get additional background information about the journals and explore editors’ needs, experiences and viewpoints. The results show that journals affiliated to publishing houses or libraries are technically well provided for. Unaffiliated journals offer fewer functionalities and display some unconventional features, often described as innovations by the editors. More resources – financial or human – is seen by nearly all editors as the most pressing need and as a limitation to growth. In comparison, IT/technical needs are mentioned much less often. The article also describes the launch of an Editors’ Forum, an idea suggested by the editors and implemented by the library. This Forum offered further valuable insight into the potential role of libraries, but also specifically addressed several of the editors’ needs as expressed in the interviews.

  12. Electrical impedance tomography system: an open access circuit design.

    Science.gov (United States)

    Soleimani, Manuchehr

    2006-05-03

    This paper reports a simple 2-D system for electrical impedance tomography EIT, which works efficiently and is low cost. The system has been developed in the Sharif University of Technology Tehran-Iran (for the author's MSc Project). The EIT system consists of a PC in which an I/O card is installed with an external current generator, a multiplexer, a power supply and a phantom with an array of electrodes. The measurement system provides 12-bit accuracy and hence, suitable data acquisition software has been prepared accordingly. The synchronous phase detection method has been implemented for voltage measurement. Different methods of image reconstruction have been used with this instrument to generate electrical conductivity images. The results of simulation and real measurement of the system are presented. The reconstruction programs were written in MATLAB and the data acquisition software in C++. The system has been tested with both static and dynamic mode in a 2-D domain. Better results have been produced in the dynamic mode of operation, due to the cancellation of errors. In the spirit of open access publication the design details of this simple EIT system are made available here.

  13. Scholarly communication : the role of oai in the context of open access

    Directory of Open Access Journals (Sweden)

    Ana Alice Baptista

    2007-12-01

    Full Text Available This paper discusses Open Access to scientific knowledge and its impacts on research. It overviews some of the major issues regarding the use of information technologies in scholarly communication activities, highlighting recent issues such as repository selfarchiving (green road and Open Access journals (golden road. Such issues are focused both as a reaction of researchers to the current business models of commercial scholarly publishers and as an awareness of the increasingly impact of documents available in Open Access. It adds to this discussion information about the necessary policies to fully implement Open Access. Authors describe the main technology facilities that support Open Access, such as OAI compliant Repositories and Journal Management systems. Moreover, future perspectives that should guide academic and government policies, decisions and actions that can assure Open Access, particularly in Portuguese Speaking Countries, are discussed.

  14. Thomson Scientific's expanding Web of Knowledge: beyond citation databases and current awareness services.

    Science.gov (United States)

    London, Sue; Brahmi, Frances A

    2005-01-01

    As end-user demand for easy access to electronic full text continues to climb, an increasing number of information providers are combining that access with their other products and services, making navigating their Web sites by librarians seeking information on a given product or service more daunting than ever. One such provider of a complex array of products and services is Thomson Scientific. This paper looks at some of the many products and tools available from two of Thomson Scientific's businesses, Thomson ISI and Thomson ResearchSoft. Among the items of most interest to health sciences and veterinary librarians and their users are the variety of databases available via the ISI Web of Knowledge platform and the information management products available from ResearchSoft.

  15. Mapping the Intellectual Structure of the Open Access Field Through Co-citation Analysis.

    OpenAIRE

    Düzyol, Güleda; Taşkın, Zehra; Tonta, Yaşar

    2010-01-01

    Open access has been one of the major research trends and hottest topics in electronic publishing. This paper aims to assess the evolution of open access as a research field using bibliometric and scientific visualization techniques. It maps the intellectual structure of open access based on 281 articles that appeared in professional literature on the topic between 2000 and 2010. Using bibliometric and co-citation analyses, co-citation patterns of papers are visualized through a number of co-...

  16. Open Access and Open Knowledge Short Course: All About the Research

    OpenAIRE

    Clobridge, Abby

    2015-01-01

    Slides from Day 3 of the UCL Qatar Short Course, "Open Access and Open Knowledge." Slide deck covers an introduction to various issues related to providing support for researchers who wish to make their research outputs openly access (or are required to do so by a research funding agency policy). Topics covered include: the Budapest Open Access Initiative (BOAI), recent trends in funding agencies' OA policies, using the SPARC author addendum, and looking up publishers' policies via SHERP...

  17. Focus on open access in Latin America. Remedios Melero’s Interview

    OpenAIRE

    Remedios Melero; Marcela Fushimi; Claudia González; Pené, Mónica G.; Carolina Unzurrunzaga

    2014-01-01

    This contribution aims to bring readers of a conversation between Remedios Melero, one of the main advocates for open access in Spain and Latin America, and members of the research project "Open access to scientific knowledge in Argentina. State of the art and main trends" (H540). The talk was on the progress made on the open access movement in Ibero-America, their similarities and differences with Spain, the influence of the laws designed to establish a suitable framework for their developme...

  18. Focus on open access in Latin America. Remedios Melero’s Interview

    Directory of Open Access Journals (Sweden)

    Remedios Melero

    2014-04-01

    Full Text Available This contribution aims to bring readers of a conversation between Remedios Melero, one of the main advocates for open access in Spain and Latin America, and members of the research project "Open access to scientific knowledge in Argentina. State of the art and main trends" (H540. The talk was on the progress made on the open access movement in Ibero-America, their similarities and differences with Spain, the influence of the laws designed to establish a suitable framework for their development, the prospect of so-called green and gold routes is reviewed - repositories and open access journals, and the main courses of research on the topic.

  19. Open Access und Geisteswissenschaften: Widerspruch oder Zukunft? : das Symposium "Open Access, E-Humanities & E-Science" des Exzellenzportals "Leibniz Publik" der Bayerischen Staatsbibliothek

    OpenAIRE

    Doß, Brigitte; Janello, Christoph; Thiessen, Peter

    2014-01-01

    Zum Abschluss der zweiten Förderphase von „Leibniz Publik“, der Exzellenzplattform der Leibniz-Preisträger der Deutschen Forschungsgemeinschaft, veranstaltete die Bayerische Staatsbibliothek das Symposium „Open Access, E-Humanities & E-Science“. Der Beitrag fasst die Vorträge und Diskussionen zusammen und gibt somit einen Überblick über den Stand und die perspektivische Entwicklung von Open Access speziell in den Geisteswissenschaften.

  20. Evaluation of an open-access CBT-based Internet program for social anxiety: Patterns of use, retention, and outcomes.

    Science.gov (United States)

    Dryman, M Taylor; McTeague, Lisa M; Olino, Thomas M; Heimberg, Richard G

    2017-10-01

    Internet-delivered cognitive-behavioral therapy (ICBT) has been established as both efficacious and effective in reducing symptoms of social anxiety. However, most research has been conducted in controlled settings, and little is known regarding the utility of such programs in an open-access format. The present study examined the use, adherence, and effectiveness of Joyable, an open-access, Internet-delivered, coach-supported CBT-based intervention for social anxiety. Participants were 3,384 registered users (Mage [SD] = 29.82 [7.89]; 54% male) that created an account between 2014 and 2016. Characteristics of use, factors related to attrition and adherence, and within-group outcomes were examined. The primary outcome measure was the Social Phobia Inventory. On average, participants remained in the program for 81.02 days (SD = 60.50), during which they completed 12.14 activities (SD = 11.09) and 1.53 exposures (SD = 3.18). About half (57%) had contact with a coach. Full adherence to the program was achieved by 16% of participants, a rate higher than previously published open-access studies of ICBT. Social anxiety symptoms were significantly reduced for participants that engaged in the program, with medium within-group effects from baseline through the cognitive restructuring module (d = 0.63-0.76) and large effects from baseline through the exposure module (d = 1.40-1.83). Response rates were high (72%). Exposures and coach contact were significant predictors of retention and outcome. This open-access online CBT-based program is effective in reducing social anxiety symptoms and has the potential to extend Internet-based mental health services to socially anxious individuals unwilling or unable to seek face-to-face evidence-based therapy. (PsycINFO Database Record (c) 2017 APA, all rights reserved).

  1. The Open Access Association? EAHIL's new model for sustainability.

    Science.gov (United States)

    McSean, Tony; Jakobsson, Arne

    2009-12-01

    To discover a governance structure and a business model for the European Association for Health Information and Libraries (EAHIL) which will be economically sustainable in the medium term, arresting a long-term gradual decline in membership numbers and implementing new revenue streams to sustain association activity. Reviewed survival strategies of other professional associations, investigated potential of emerging interactive web technologies, investigated alternative revenue streams based around the 'franchise' of the annual EAHIL conferences and workshops. A fully worked-through and costed alternative structure was produced, based on abolition of the subscription, web-based procedures and functions, increased income from advertising and sponsorship and a large measure of member participation and engagement. Statutes and Rules of Procedure were rewritten to reflect the changes. This plan was put through the Association's approval cycle and implemented in 2005. The new financial model has proved itself sustainable on the basis of the first 2 years' operations. The long-term gradual decline in membership was reversed, with membership numbers trebling across the EAHIL region. The software worked with minimal problems, including the online electoral process. With no identified precedent from other professional associations, the changes represented a considerable risk, which was justifiable because long-term projections made it clear that continuing the traditional model was not viable. The result is a larger, healthier association with a stronger link to its membership. Long-term risks include the high level of member commitment and expertise. There are also important questions about scalability-diseconomies of scale probably limit the applicability of the overall open access model to larger associations.

  2. Open access to the scientific journal literature: situation 2009.

    Directory of Open Access Journals (Sweden)

    Bo-Christer Björk

    Full Text Available BACKGROUND: The Internet has recently made possible the free global availability of scientific journal articles. Open Access (OA can occur either via OA scientific journals, or via authors posting manuscripts of articles published in subscription journals in open web repositories. So far there have been few systematic studies showing how big the extent of OA is, in particular studies covering all fields of science. METHODOLOGY/PRINCIPAL FINDINGS: The proportion of peer reviewed scholarly journal articles, which are available openly in full text on the web, was studied using a random sample of 1837 titles and a web search engine. Of articles published in 2008, 8.5% were freely available at the publishers' sites. For an additional 11.9% free manuscript versions could be found using search engines, making the overall OA percentage 20.4%. Chemistry (13% had the lowest overall share of OA, Earth Sciences (33% the highest. In medicine, biochemistry and chemistry publishing in OA journals was more common. In all other fields author-posted manuscript copies dominated the picture. CONCLUSIONS/SIGNIFICANCE: The results show that OA already has a significant positive impact on the availability of the scientific journal literature and that there are big differences between scientific disciplines in the uptake. Due to the lack of awareness of OA-publishing among scientists in most fields outside physics, the results should be of general interest to all scholars. The results should also interest academic publishers, who need to take into account OA in their business strategies and copyright policies, as well as research funders, who like the NIH are starting to require OA availability of results from research projects they fund. The method and search tools developed also offer a good basis for more in-depth studies as well as longitudinal studies.

  3. Open-Access Mega-Journals: A Bibliometric Profile.

    Science.gov (United States)

    Wakeling, Simon; Willett, Peter; Creaser, Claire; Fry, Jenny; Pinfield, Stephen; Spezi, Valérie

    2016-01-01

    In this paper we present the first comprehensive bibliometric analysis of eleven open-access mega-journals (OAMJs). OAMJs are a relatively recent phenomenon, and have been characterised as having four key characteristics: large size; broad disciplinary scope; a Gold-OA business model; and a peer-review policy that seeks to determine only the scientific soundness of the research rather than evaluate the novelty or significance of the work. Our investigation focuses on four key modes of analysis: journal outputs (the number of articles published and changes in output over time); OAMJ author characteristics (nationalities and institutional affiliations); subject areas (the disciplinary scope of OAMJs, and variations in sub-disciplinary output); and citation profiles (the citation distributions of each OAMJ, and the impact of citing journals). We found that while the total output of the eleven mega-journals grew by 14.9% between 2014 and 2015, this growth is largely attributable to the increased output of Scientific Reports and Medicine. We also found substantial variation in the geographical distribution of authors. Several journals have a relatively high proportion of Chinese authors, and we suggest this may be linked to these journals' high Journal Impact Factors (JIFs). The mega-journals were also found to vary in subject scope, with several journals publishing disproportionately high numbers of articles in certain sub-disciplines. Our citation analsysis offers support for Björk & Catani's suggestion that OAMJs's citation distributions can be similar to those of traditional journals, while noting considerable variation in citation rates across the eleven titles. We conclude that while the OAMJ term is useful as a means of grouping journals which share a set of key characteristics, there is no such thing as a "typical" mega-journal, and we suggest several areas for additional research that might help us better understand the current and future role of OAMJs in

  4. Open access to the scientific journal literature: situation 2009.

    Science.gov (United States)

    Björk, Bo-Christer; Welling, Patrik; Laakso, Mikael; Majlender, Peter; Hedlund, Turid; Gudnason, Gudni

    2010-06-23

    The Internet has recently made possible the free global availability of scientific journal articles. Open Access (OA) can occur either via OA scientific journals, or via authors posting manuscripts of articles published in subscription journals in open web repositories. So far there have been few systematic studies showing how big the extent of OA is, in particular studies covering all fields of science. The proportion of peer reviewed scholarly journal articles, which are available openly in full text on the web, was studied using a random sample of 1837 titles and a web search engine. Of articles published in 2008, 8.5% were freely available at the publishers' sites. For an additional 11.9% free manuscript versions could be found using search engines, making the overall OA percentage 20.4%. Chemistry (13%) had the lowest overall share of OA, Earth Sciences (33%) the highest. In medicine, biochemistry and chemistry publishing in OA journals was more common. In all other fields author-posted manuscript copies dominated the picture. The results show that OA already has a significant positive impact on the availability of the scientific journal literature and that there are big differences between scientific disciplines in the uptake. Due to the lack of awareness of OA-publishing among scientists in most fields outside physics, the results should be of general interest to all scholars. The results should also interest academic publishers, who need to take into account OA in their business strategies and copyright policies, as well as research funders, who like the NIH are starting to require OA availability of results from research projects they fund. The method and search tools developed also offer a good basis for more in-depth studies as well as longitudinal studies.

  5. Open Access to Research Articles and Data: Library Roles

    Science.gov (United States)

    Joseph, Heather

    2015-08-01

    Over the past decade, a handful of key developments have caused scholars and researchers to rethink not only the way they conduct their work, but also the way in which they communicate it to others. The advent of the Internet has provided unprecedented opportunities for immediate, cost effective global connectivity, opening up new possibilities for collaboration and communication. This has resulted in scholarship increasingly being conducted in the online environment, and a vast amount of new digital information being generated and made widely available to those interested in using it. Additionally, the Internet is a dynamic environment, with new channels for producing and sharing information in a myriad of formats emerging frequently.In higher education, the momentum of the burgeoning movement towards "open" sharing of information of all kinds continues to gain traction. In particular, advancements in the areas of opening up access to articles and reserch data are increasingly visible. In both of these areas, academic and research libraries are playing important, central roles in promoting the awareness of the potential costs and benefits of a more open research environment, as well as defining new roles for libraries in this digital environment.As this push for grater openness continues, these fronts are intersecting in interesting and potentially transformative ways. The Open Access and Open Data movements share fundamental philosophical commonalities that make collaboration a natural outcome. Both movements place a premium on reducing barriers to discovering and accessing pertinent digital information. Perhaps even more significantly, both explicitly recognize that enabling productive use of digital information is key to unlocking its full value. As a result of these shared priorities, there are a wide variety of common strategies that libraries can take to help advance research, presenting new opportunities for deeper collaboration to take place.This talk will

  6. Open Access to the Scientific Journal Literature: Situation 2009

    Science.gov (United States)

    Björk, Bo-Christer; Welling, Patrik; Laakso, Mikael; Majlender, Peter; Hedlund, Turid; Guðnason, Guðni

    2010-01-01

    Background The Internet has recently made possible the free global availability of scientific journal articles. Open Access (OA) can occur either via OA scientific journals, or via authors posting manuscripts of articles published in subscription journals in open web repositories. So far there have been few systematic studies showing how big the extent of OA is, in particular studies covering all fields of science. Methodology/Principal Findings The proportion of peer reviewed scholarly journal articles, which are available openly in full text on the web, was studied using a random sample of 1837 titles and a web search engine. Of articles published in 2008, 8,5% were freely available at the publishers' sites. For an additional 11,9% free manuscript versions could be found using search engines, making the overall OA percentage 20,4%. Chemistry (13%) had the lowest overall share of OA, Earth Sciences (33%) the highest. In medicine, biochemistry and chemistry publishing in OA journals was more common. In all other fields author-posted manuscript copies dominated the picture. Conclusions/Significance The results show that OA already has a significant positive impact on the availability of the scientific journal literature and that there are big differences between scientific disciplines in the uptake. Due to the lack of awareness of OA-publishing among scientists in most fields outside physics, the results should be of general interest to all scholars. The results should also interest academic publishers, who need to take into account OA in their business strategies and copyright policies, as well as research funders, who like the NIH are starting to require OA availability of results from research projects they fund. The method and search tools developed also offer a good basis for more in-depth studies as well as longitudinal studies. PMID:20585653

  7. Some LIS Faculty Indicate Reservations about Open Access

    Directory of Open Access Journals (Sweden)

    Richard Hayman

    2016-09-01

    Full Text Available A Review of: Peekhaus, W., & Proferes, N. (2015. How library and information science faculty perceive and engage with open access. Journal of Information Science, 41(5, 640-661. http://dx.doi.org/10.1177/0165551515587855 Objective – To examine the awareness of, attitudes toward, and engagement with open access (OA publishing, based on rank and tenure status among library and information science (LIS faculty in North America. Design – Web-based survey distributed via email. Setting – Accredited library and information science (LIS programs in North America. Subjects – 276 professors and professors emeriti. Methods – Researchers collected email addresses for 1,017 tenure-track, tenured, and emeriti professors from the public websites of the LIS programs. Researchers sent an email invitation to participate in the survey by accessing a URL, with the survey itself delivered using Qualtrics software. The survey included 51 total questions, some with additional sub-questions, and most items used Likert-type rating scale. The researchers analysed the data using SPSS software, and indicated using chi-square tests to measure significance, with a stated intent to get beyond the descriptive statistics commonly seen in other publications. Main Results – This study’s results draw on 276 completed responses, for a response rate of 27%. Researchers reported that 53% of respondents had some experience with publishing in a peer-reviewed OA format. When asked whether they agreed that scholarly articles should be free to access for everyone, pre-tenure assistant professors were most likely to agree (74%, followed by tenured associate professors (62%, full professors (59% and then emeriti professors (8%. However, they found less likelihood that associate professors would have actually published in an OA format, highlighting a “disconnect between beliefs about accessibility of research and actual practice with open access” (p. 646. Researchers also

  8. Disease Ontology 2015 update: an expanded and updated database of human diseases for linking biomedical knowledge through disease data.

    Science.gov (United States)

    Kibbe, Warren A; Arze, Cesar; Felix, Victor; Mitraka, Elvira; Bolton, Evan; Fu, Gang; Mungall, Christopher J; Binder, Janos X; Malone, James; Vasant, Drashtti; Parkinson, Helen; Schriml, Lynn M

    2015-01-01

    The current version of the Human Disease Ontology (DO) (http://www.disease-ontology.org) database expands the utility of the ontology for the examination and comparison of genetic variation, phenotype, protein, drug and epitope data through the lens of human disease. DO is a biomedical resource of standardized common and rare disease concepts with stable identifiers organized by disease etiology. The content of DO has had 192 revisions since 2012, including the addition of 760 terms. Thirty-two percent of all terms now include definitions. DO has expanded the number and diversity of research communities and community members by 50+ during the past two years. These community members actively submit term requests, coordinate biomedical resource disease representation and provide expert curation guidance. Since the DO 2012 NAR paper, there have been hundreds of term requests and a steady increase in the number of DO listserv members, twitter followers and DO website usage. DO is moving to a multi-editor model utilizing Protégé to curate DO in web ontology language. This will enable closer collaboration with the Human Phenotype Ontology, EBI's Ontology Working Group, Mouse Genome Informatics and the Monarch Initiative among others, and enhance DO's current asserted view and multiple inferred views through reasoning. © The Author(s) 2014. Published by Oxford University Press on behalf of Nucleic Acids Research.

  9. Montreal Archive of Sleep Studies: an open-access resource for instrument benchmarking and exploratory research.

    Science.gov (United States)

    O'Reilly, Christian; Gosselin, Nadia; Carrier, Julie; Nielsen, Tore

    2014-12-01

    Manual processing of sleep recordings is extremely time-consuming. Efforts to automate this process have shown promising results, but automatic systems are generally evaluated on private databases, not allowing accurate cross-validation with other systems. In lacking a common benchmark, the relative performances of different systems are not compared easily and advances are compromised. To address this fundamental methodological impediment to sleep study, we propose an open-access database of polysomnographic biosignals. To build this database, whole-night recordings from 200 participants [97 males (aged 42.9 ± 19.8 years) and 103 females (aged 38.3 ± 18.9 years); age range: 18-76 years] were pooled from eight different research protocols performed in three different hospital-based sleep laboratories. All recordings feature a sampling frequency of 256 Hz and an electroencephalography (EEG) montage of 4-20 channels plus standard electro-oculography (EOG), electromyography (EMG), electrocardiography (ECG) and respiratory signals. Access to the database can be obtained through the Montreal Archive of Sleep Studies (MASS) website (http://www.ceams-carsm.ca/en/MASS), and requires only affiliation with a research institution and prior approval by the applicant's local ethical review board. Providing the research community with access to this free and open sleep database is expected to facilitate the development and cross-validation of sleep analysis automation systems. It is also expected that such a shared resource will be a catalyst for cross-centre collaborations on difficult topics such as improving inter-rater agreement on sleep stage scoring. © 2014 European Sleep Research Society.

  10. Open Access Works are as Reliable as Other Publishing Models at Retracting Flawed Articles from the Biomedical Literature

    Directory of Open Access Journals (Sweden)

    Elizabeth Margaret Stovold

    2014-09-01

    Full Text Available A Review of: Peterson, G.M. (2013. Characteristics of retracted open access biomedical literature: a bibliographic analysis. Journal of the American Society for Information Science and Technology. 64(12, 2428-2436. doi: 10.1002/asi.22944 Objective – To investigate whether the rate of retracted articles and citation rates post-retraction in the biomedical literature are comparable across open access, free-to-access, or pay-to-access journals. Design – Citation analysis. Setting – Biomedical literature. Subjects – 160 retracted papers published between 1st January 2001 and 31st December 2010. Methods – For the retracted papers, 100 records were retrieved from the PubMed database and 100 records from the PubMed Central (PMC open access subset. Records were selected at random, based on the PubMed identifier. Each article was assigned a number based on its accessibility using the specific criteria. Articles published in the PMC open access subset were assigned a 2; articles retrieved from PubMed that were freely accessible, but did not meet the criteria for open access were assigned a 1; and articles retrieved through PubMed which were pay-to-access were assigned a 0. This allowed articles to be grouped and compared by accessibility. Citation information was collected primarily from the Science Citation Index. Articles for which no citation information was available, and those with a lifetime citation of 0 (or 1 where the citation came from the retraction statement were excluded, leaving 160 articles for analysis. Information on the impact factor of the journals was retrieved and the analysis was performed twice; first with the entire set, and second after excluding articles published in journals with an impact factor of 10 or above (14% of the total. The average number of citations per month was used to compare citation rates, and the percentage change in citation rate pre- and post-retraction was calculated. Information was also collected

  11. Patterns of citations of open access and non-open access conservation biology journal papers and book chapters.

    Science.gov (United States)

    Calver, Michael C; Bradley, J Stuart

    2010-06-01

    Open access (OA) publishing, whereby authors, their institutions, or their granting bodies pay or provide a repository through which peer-reviewed work is available online for free, is championed as a model to increase the number of citations per paper and disseminate results widely, especially to researchers in developing countries. We compared the number of citations of OA and non-OA papers in six journals and four books published since 2000 to test whether OA increases number of citations overall and increases citations made by authors in developing countries. After controlling for type of paper (e.g., review or research paper), length of paper, authors' citation profiles, number of authors per paper, and whether the author or the publisher released the paper in OA, OA had no statistically significant influence on the overall number of citations per journal paper. Journal papers were cited more frequently if the authors had published highly cited papers previously, were members of large teams of authors, or published relatively long papers, but papers were not cited more frequently if they were published in an OA source. Nevertheless, author-archived OA book chapters accrued up to eight times more citations than chapters in the same book that were not available through OA, perhaps because there is no online abstracting service for book chapters. There was also little evidence that journal papers or book chapters published in OA received more citations from authors in developing countries relative to those journal papers or book chapters not published in OA. For scholarly publications in conservation biology, only book chapters had an OA citation advantage, and OA did not increase the number of citations papers or chapters received from authors in developing countries.

  12. Virtual slides in peer reviewed, open access medical publication.

    Science.gov (United States)

    Kayser, Klaus; Borkenfeld, Stephan; Goldmann, Torsten; Kayser, Gian

    2011-12-19

    Application of virtual slides (VS), the digitalization of complete glass slides, is in its infancy to be implemented in routine diagnostic surgical pathology and to issues that are related to tissue-based diagnosis, such as education and scientific publication. Electronic publication in Pathology offers new features of scientific communication in pathology that cannot be obtained by conventional paper based journals. Most of these features are based upon completely open or partly directed interaction between the reader and the system that distributes the article. One of these interactions can be applied to microscopic images allowing the reader to navigate and magnify the presented images. VS and interactive Virtual Microscopy (VM) are a tool to increase the scientific value of microscopic images. The open access journal Diagnostic Pathology http://www.diagnosticpathology.org has existed for about five years. It is a peer reviewed journal that publishes all types of scientific contributions, including original scientific work, case reports and review articles. In addition to digitized still images the authors of appropriate articles are requested to submit the underlying glass slides to an institution (DiagnomX.eu, and Leica.com) for digitalization and documentation. The images are stored in a separate image data bank which is adequately linked to the article. The normal review process is not involved. Both processes (peer review and VS acquisition) are performed contemporaneously in order to minimize a potential publication delay. VS are not provided with a DOI index (digital object identifier). The first articles that include VS were published in March 2011. Several logistic constraints had to be overcome until the first articles including VS could be published. Step by step an automated acquisition and distribution system had to be implemented to the corresponding article. The acceptance of VS by the reader is high as well as by the authors. Of specific value

  13. Open access web technology for mathematics learning in higher education

    Directory of Open Access Journals (Sweden)

    Mari Carmen González-Videgaray

    2016-05-01

    Full Text Available Problems with mathematics learning, “math anxiety” or “statistics anxiety” among university students can be avoided by using teaching strategies and technological tools. Besides personal suffering, low achievement in mathematics reduces terminal efficiency and decreases enrollment in careers related to science, technology and mathematics. This paper has two main goals: 1 to offer an organized inventory of open access web resources for math learning in higher education, and 2 to explore to what extent these resources are currently known and used by students and teachers. The first goal was accomplished by running a search in Google and then classifying resources. For the second, we conducted a survey among a sample of students (n=487 and teachers (n=60 from mathematics and engineering within the largest public university in Mexico. We categorized 15 high-quality web resources. Most of them are interactive simulations and computer algebra systems. ResumenLos problemas en el aprendizaje de las matemáticas, como “ansiedad matemática” y “ansiedad estadística” pueden evitarse si se usan estrategias de enseñanza y herramientas tecnológicas. Además de un sufrimiento personal, el bajo rendimiento en matemáticas reduce la eficiencia terminal y decrementa la matrícula en carreras relacionadas con ciencia, tecnología y matemáticas. Este artículo tiene dos objetivos: 1 ofrecer un inventario organizado de recursos web de acceso abierto para aprender matemáticas en la universidad, y 2 explorar en qué medida estos recursos se usan actualmente entre alumnos y profesores. El primer objetivo se logró con un perfil de búsqueda en Google y una clasificación. Para el segundo, se condujo una encuesta en una muestra de estudiantes (n=487 y maestros (n=60 de matemáticas e ingeniería de la universidad más grande de México. Categorizamos 15 recursos web de alta calidad. La mayoría son simulaciones interactivas y

  14. Virtual slides in peer reviewed, open access medical publication

    Directory of Open Access Journals (Sweden)

    Kayser Klaus

    2011-12-01

    Full Text Available Abstract Background Application of virtual slides (VS, the digitalization of complete glass slides, is in its infancy to be implemented in routine diagnostic surgical pathology and to issues that are related to tissue-based diagnosis, such as education and scientific publication. Approach Electronic publication in Pathology offers new features of scientific communication in pathology that cannot be obtained by conventional paper based journals. Most of these features are based upon completely open or partly directed interaction between the reader and the system that distributes the article. One of these interactions can be applied to microscopic images allowing the reader to navigate and magnify the presented images. VS and interactive Virtual Microscopy (VM are a tool to increase the scientific value of microscopic images. Technology and Performance The open access journal Diagnostic Pathology http://www.diagnosticpathology.org has existed for about five years. It is a peer reviewed journal that publishes all types of scientific contributions, including original scientific work, case reports and review articles. In addition to digitized still images the authors of appropriate articles are requested to submit the underlying glass slides to an institution (DiagnomX.eu, and Leica.com for digitalization and documentation. The images are stored in a separate image data bank which is adequately linked to the article. The normal review process is not involved. Both processes (peer review and VS acquisition are performed contemporaneously in order to minimize a potential publication delay. VS are not provided with a DOI index (digital object identifier. The first articles that include VS were published in March 2011. Results and Perspectives Several logistic constraints had to be overcome until the first articles including VS could be published. Step by step an automated acquisition and distribution system had to be implemented to the corresponding

  15. Breaking the internet: making Stephen Hawking's PhD thesis available open access

    OpenAIRE

    Ammon, Matthias; Smith, Arthur

    2018-01-01

    Slides from a lightning talk (5 minute presentation) by Matthias Ammon (Research Support Librarian, MML Library, University of Cambridge) and Arthur Smith (Open Access Team, Office of Scholarly Communication, University of Cambridge). Presented at Cambridge Libraries Conference 2018. The talk discussed the process and impact of making Stephen Hawking's PhD thesis available as open access.

  16. The Future of Open Access Publishing in the Netherlands: Constant Dripping Wears Away the Stone

    Science.gov (United States)

    Woutersen-Windhouwer, Saskia

    2013-01-01

    At present, about 20% of the scientific publications worldwide are freely (open-access) available (Bjork, Welling, Laakso, Majlender, Hedlund, & Guonason, 2010) and this percentage is constantly on the rise. In the Netherlands, a similar trend is visible (see Fig. 1). Why is open-access (OA) publishing important, and why will it become even…

  17. Open access is almost here: navigating through copyright, fair use, and the TEACH Act.

    Science.gov (United States)

    Lyons, Margaret G

    2010-02-01

    Dealing with the complexities of copyright, fair use, the TEACH Act, and the concept of open access can confuse even the most experienced educator. Online education has added to the dilemma. This article discusses the latest information on copyright issues, current guidelines for interpreting fair use and incorporating the TEACH Act, and recent developments in open access publishing. Copyright 2010, SLACK Incorporated.

  18. The SciELO Open Access: A Gold Way from the South

    Science.gov (United States)

    Packer, Abel L.

    2009-01-01

    Open access has long emphasized access to scholarly materials. However, open access can also mean access to the means of producing visible and recognized journals. This issue is particularly important in developing and emergent countries. The SciELO (Scientific Electronic Library On-line) project, first started in Brazil and, shortly afterward, in…

  19. The academic, economic and societal impacts of Open Access : An evidence-based review

    NARCIS (Netherlands)

    Tennant, Jonathan P.; Waldner, François; Jacques, Damien C.; Masuzzo, Paola; Collister, Lauren B.; Hartgerink, C.H.J.

    2016-01-01

    Ongoing debates surrounding Open Access to the scholarly literature are multifaceted and complicated by disparate and often polarised viewpoints from engaged stakeholders. At the current stage, Open Access has become such a global issue that it is critical for all involved in scholarly publishing,

  20. The future of open access publishing in the Netherlands: constant dripping wears away the stone

    NARCIS (Netherlands)

    Woutersen-Windhouwer, S.

    2013-01-01

    At present, about 20% of the scientific publications worldwide are freely (open-access) available, and this percentage is constantly on the rise. In the Netherlands, a similar trend is visible (see figure one). Why is open-access (OA) publishing important, and why will it become even more important

  1. A Comparison of Student Confidence Levels in Open Access and Undergraduate University Courses

    Science.gov (United States)

    Atherton, Mirella

    2017-01-01

    Confidence levels of students enrolled in open access programs and undergraduate courses were measured at the University of Newcastle. The open access science students aimed to gain access to undergraduate studies in various disciplines at University. The undergraduate students were enrolled in a variety of degrees and were surveyed during their…

  2. Acceptance and Adoption of Open Access Publication (OAP) in University Libraries in South East Nigeria

    Science.gov (United States)

    Sambe, Manasseh Tyungu; Raphael, Gabriel Okplogidi

    2015-01-01

    This study examines the kinds of open access scholarly publication or information resources accepted and adopted by federal university libraries in South East Nigeria. The purpose was to determine the factors that affect open access scholarly publication or information resources acceptance and adoption in university libraries. The study adopted…

  3. This paper describes Open Access (OA). It discusses two main forms ...

    African Journals Online (AJOL)

    (2005) open access is “free availability on the internet, permitting users to read, download, copy, distribute, print, search, ... inseparable from gaining access to the internet itself”. Berlin Declaration (2003) gives a .... open access will be an important factor in the evolution of scholarly publishing, and that both publishers and ...

  4. Open Access - nicht nur ein Thema für wissenschaftliche Bibliotheken

    OpenAIRE

    Schmitz, Jasmin

    2017-01-01

    Vortrag im Rahmen der Open-Access-Tage 2017, Dresden, 12.09.2017 in der Zentralbibliothek der Städtischen Bibliotheken Dresden: Einführung ins Thema Open Access, Recherche-Datenbanken-Freie Angebote im Internet, Citizen Science, Open Innovation, u.a.m.

  5. International survey of research university leadership views on supporting open access scholarly & educational materials

    CERN Document Server

    2017-01-01

    This report looks closely at the attitudes on open access of a sample of 314 deans, chancellors, department chairmen, research institute directors, provosts, trustees, vice presidents and other upper level administrators from more than 50 research universities in the USA, Canada, the UK, Ireland and Australia. The report gives detailed information on what they think of the cost of academic journal subscriptions, and how they understand the meaning of the term “open access.” The study also gives highly detailed data on what kind of policies the research university elite support or might support in the area of open access, including policies such as restricting purchases of very high-priced journals, paying publication fees for open access publications, mandating deposit of university scholarship into digital repositories, and developing open access educational materials from university resources. Just a few of the report’s many findings are that: • The lowest percentage of those interviewed considering...

  6. Highlights from the SOAP project survey. What Scientists Think about Open Access Publishing

    CERN Document Server

    Dallmeier-Tiessen, Suenje; Goerner, Bettina; Hyppoelae, Jenni; Igo-Kemenes, Peter; Kahn, Deborah; Lambert, Simon; Lengenfelder, Anja; Leonard, Chris; Mele, Salvatore; Nowicka, Malgorzata; Polydoratou, Panayiota; Ross, David; Ruiz-Perez, Sergio; Schimmer, Ralf; Swaisland, Mark; van der Stelt, Wim

    2011-01-01

    The SOAP (Study of Open Access Publishing) project has run a large-scale survey of the attitudes of researchers on, and the experiences with, open access publishing. Around forty thousands answers were collected across disciplines and around the world, showing an overwhelming support for the idea of open access, while highlighting funding and (perceived) quality as the main barriers to publishing in open access journals. This article serves as an introduction to the survey and presents this and other highlights from a preliminary analysis of the survey responses. To allow a maximal re-use of the information collected by this survey, the data are hereby released under a CC0 waiver, so to allow libraries, publishers, funding agencies and academics to further analyse risks and opportunities, drivers and barriers, in the transition to open access publishing.

  7. Comparison of trial participants and open access users of a web-based physical activity intervention regarding adherence, attrition, and repeated participation.

    Science.gov (United States)

    Wanner, Miriam; Martin-Diener, Eva; Bauer, Georg; Braun-Fahrländer, Charlotte; Martin, Brian W

    2010-02-10

    Web-based interventions are popular for promoting healthy lifestyles such as physical activity. However, little is known about user characteristics, adherence, attrition, and predictors of repeated participation on open access physical activity websites. The focus of this study was Active-online, a Web-based individually tailored physical activity intervention. The aims were (1) to assess and compare user characteristics and adherence to the website (a) in the open access context over time from 2003 to 2009, and (b) between trial participants and open access users; and (2) to analyze attrition and predictors of repeated use among participants in a randomized controlled trial compared with registered open access users. Data routinely recorded in the Active-online user database were used. Adherence was defined as: the number of pages viewed, the proportion of visits during which a tailored module was begun, the proportion of visits during which tailored feedback was received, and the time spent in the tailored modules. Adherence was analyzed according to six one-year periods (2003-2009) and according to the context (trial or open access) based on first visits and longest visits. Attrition and predictors of repeated participation were compared between trial participants and open access users. The number of recorded visits per year on Active-online decreased from 42,626 in 2003-2004 to 8343 in 2008-2009 (each of six one-year time periods ran from April 23 to April 22 of the following year). The mean age of users was between 38.4 and 43.1 years in all time periods and both contexts. The proportion of women increased from 49.5% in 2003-2004 to 61.3% in 2008-2009 (Ptrends in adherence to Active-online. The mean age of trial participants was 43.1 years, and 74.9% were women. Comparing contexts, adherence was highest for registered open access users. For open access users, adherence was similar during the first and the longest visits; for trial participants, adherence was

  8. Institutional open access funds: now is the time.

    Science.gov (United States)

    Eckman, Charles D; Weil, Beth T

    2010-05-25

    particularly heightened during this economic crisis when investments in subscriptions are increasingly difficult to justify, particularly given the alternate forms of open access to content and decreasing ability for libraries to reliably distinguish OA and non-OA content within the journal. We believe that institutions (and the sub-institutional units that manage collection funds) should be open to exploring alternative funding models for scholarly communication. Institutions should highly value funding models that promote universal access to their research output. And during an economic crisis, these institutions should question the extensive financial and human resource investments required by the subscription model, a model that both excludes nonauthorized users and entails large-scale and complex licensing and legal obligations. The time is now for broad-scale adoption of institutional OA funds.

  9. Institutional open access funds: now is the time.

    Directory of Open Access Journals (Sweden)

    Charles D Eckman

    2010-05-01

    experiment is particularly heightened during this economic crisis when investments in subscriptions are increasingly difficult to justify, particularly given the alternate forms of open access to content and decreasing ability for libraries to reliably distinguish OA and non-OA content within the journal. We believe that institutions (and the sub-institutional units that manage collection funds should be open to exploring alternative funding models for scholarly communication. Institutions should highly value funding models that promote universal access to their research output. And during an economic crisis, these institutions should question the extensive financial and human resource investments required by the subscription model, a model that both excludes nonauthorized users and entails large-scale and complex licensing and legal obligations. The time is now for broad-scale adoption of institutional OA funds.

  10. Improving open access to the results of USGS research (Invited)

    Science.gov (United States)

    Bristol, S.

    2013-12-01

    Government Information' and a related policy from the Office of Management and Budget entitled 'Open Data Policy-Managing Information as an Asset.' Together these three directives describe an overall strategy for Federal agencies to improve the open accessibility and usability of data as a crucial resource. The USGS is coordinating responsive actions to these directives and other related initiatives to orchestrate policy and new capabilities that will enable and accelerate scientific discovery within core mission responsibilities and help move science forward on the whole. Wherever possible, existing capabilities and technological systems are being leveraged and combined to reduce duplication and the need for new investments. Policies associated with data management and our overall Fundamental Science Practices are being updated and implemented with care to not create additional burdens on researchers and data stewards. All of these actions are being conducted in collaboration with our Earth science partners in government, academia, and industry to discover, implement, and sustain the best practices and solutions.

  11. Open Access am Standort D – erweiterte Perspektiven für die Wissenschaft / Open Access in Germany – new prospects for science and scholarship

    Directory of Open Access Journals (Sweden)

    Ilg-Hartbecke, Karin

    2009-06-01

    Full Text Available The increasing implementation of the Open Access idea has given rise to new scholarly information-supply and communication models in both the German and international research landscapes. For example, over half the research-oriented universities in Germany now operate their own institutional repository. In the long term, Open Access repositories represent an ideal basic infrastructure for handling scholarly publications since they offer worldwide accessibility, enhanced visibility and value-added services such as disciplinary and cross-disciplinary search options, usage statistics and citation analysis. This contribution provides an up-to-date overview and describes not only the current framework conditions and developments but also the barriers to development in the German repository landscape. It also deals with initiatives designed to introduce publishers, authors and general information providers to Open Access practices.

  12. Der grüne Weg zu Open Access: institutionelle und fachliche Repositorien / The Green Road to Open access: institutional and subject repositories

    Directory of Open Access Journals (Sweden)

    Bauer, Bruno

    2009-06-01

    Full Text Available The recent issue 1/2009 of GMS Medizin – Bibliothek – Information has a focus on „The green road to open Access: institutional and subject repositories“. Self-archiving and storing scholarly publications on a print server were also central topics in many presentations at the 9th International Bielefeld Conference in February 2009. The authors in this issue are Birgit Schmidt and Karin Ilg-Hartecke (Open Access in Deutschland – erweiterte Perspektiven für die Wissenschaft, Christoph Bruch and Anja Lengenfelder (Unterstützung des Grünen Weges zu Open Access an der Max-Planck-Gesellschaft, Ulrich Herb and Matthias Müller (Nuancen in Grün: Betrieb eines institutionellen und disziplinären Repositoriums – Erfahrungen und Entwicklungen an der Saarländischen Universitäts- und Landesbibliothek, Timo Borst and Jan B. Weiland (EconStor: ein fachliches Repositorium für die Wirtschaftswissenschaften, Antonella de Robbio and Michael Katzmayr (The management of an international open access repository: the case of E-LIS and Christian Gumpenberger (The EPrints story: Southampton as the cradle of institutional self-archiving.Furthermore this focus issue features an interview of a representative of a research funding organisation (Repositorien: Der grüne Weg zu Open Access Publishing aus der Perspektive einer Forschungsförderungsorganisation. 10 Fragen von Bruno Bauer an Falk Reckling, Mitarbeiter des FWF Der Wissenschaftsfonds and an interview of a publisher (Repositorien: Der grüne Weg zu Open Access Publishing aus der Perspektive der International Association of Scientific, Technical & Medical Publishers (STM: 10 Fragen von Bruno Bauer an Barbara Kalumenos, Director of Public Affairs bei STM.

  13. Open Access to General Practice Was Associated with Burnout among General Practitioners

    Directory of Open Access Journals (Sweden)

    Peter Vedsted

    2013-01-01

    Full Text Available Walk-in open access in general practice may influence the general practitioner’s (GP’s work, but very little research has been done on the consequences. In this study from Danish general practice, we compare the prevalence of burnout between GPs with a walk-in open access and those without. In a questionnaire study (2004, we approached all 458 active GPs in the county of Aarhus, Denmark, and 376 (82.8% GPs returned the questionnaire. Walk-in open access was defined as at least 30 minutes every weekday where patients could attend practice without an appointment. Burnout was measured by the Maslach Burnout Inventory. Analyses using logistic regression were adjusted for gender, age, marital status, job satisfaction, minutes per consultation, practice organisation, working hours, number of listed patients per GP, number of contacts per GP, continuing medical education- (CME- activities, and clusters of GPs. In all, 8% of GPs had open access and the prevalence of burnout was 24%. GPs with walk-in open access were more likely to suffer from burnout. Having open access was associated with a 3-fold increased likelihood of burnout (OR = 3.1 (95% CI: 1.1–8.8, P=0.035. Although the design cannot establish causality, it is recommended to closely monitor possible negative consequences of open access in general practice.

  14. Internationalisation of information services for publishers' open access policies: the DINI multilingual integration layer.

    Science.gov (United States)

    Scholze, Frank

    2008-07-28

    It is essential for the strategy of open access self-archiving that scientific authors are given comprehensive information on publisher copyright policies. DINI, the German Initiative for Networked Information, has developed a German (and potentially multilingual) interface to the English SHERPA/RoMEO service to provide additional information on German publishers' open access policies. As a next step, this interface was enhanced to an integration layer combining different sources on publisher copyright policies. This integration layer can be used in many different contexts. Together with the SHERPA/RoMEO team, DINI aims to build an international support structure for open access information.

  15. Amplifying the Impact of Open Access: Wikipedia and the Diffusion of Science

    CERN Document Server

    Teplitskiy, Misha; Duede, Eamon

    2015-01-01

    With the rise of Wikipedia as a first-stop source for scientific knowledge, it is important to compare its representation of that knowledge to that of the academic literature. This article approaches such a comparison through academic references made within the worlds 50 largest Wikipedias. Previous studies have raised concerns that Wikipedia editors may simply use the most easily accessible academic sources rather than sources of the highest academic status. We test this claim by identifying the 250 most heavily used journals in each of 26 research fields (4,721 journals, 19.4M articles in total) indexed by the Scopus database, and modeling whether topic, academic status, and accessibility make articles from these journals more or less likely to be referenced on Wikipedia. We find that, controlling for field and impact factor, the odds that an open access journal is referenced on the English Wikipedia are 47% higher compared to closed access journals. Moreover, in most of the worlds Wikipedias a journals hig...

  16. Editorial: Models, technologies and approaches toward widening the open access to learning and education

    National Research Council Canada - National Science Library

    Rachid Benlamri; Fanny Klett; Minhong Wang

    2016-01-01

    .... The Open Access to Learning and Education embraces not only various technologies, such as mobile and intelligent technologies, content and data management, user-centered design, but also diverse...

  17. Attracted to open access journals: A bibliometric author analysis in the field of biology

    DEFF Research Database (Denmark)

    Faber Frandsen, Tove

    2009-01-01

    Purpose - Scholars from developing countries have limited access to research publications due to expensive subscription costs. However, the open access movement is challenging the constraint to access. Consequently, researchers in developing countries are often mentioned as major recipients of th...

  18. Global Roads Open Access Data Set, Version 1 (gROADSv1)

    Data.gov (United States)

    National Aeronautics and Space Administration — The Global Roads Open Access Data Set, Version 1 (gROADSv1) was developed under the auspices of the CODATA Global Roads Data Development Task Group. The data set...

  19. Open Access Publishing in High-Energy Physics: the SCOAP(3) Initiative

    CERN Document Server

    Mele, Salvatore

    2010-01-01

    Scholarly communication in High-Energy Physics (HEP) shows traits very similar to Astronomy and Astrophysics: pervasiveness of Open Access to preprints through community-based services; a culture of openness and sharing among its researchers; a compact number of yearly articles published by a relatively small number of journals which are dear to the community. These aspects have led HEP to spearhead an innovative model for the transition of its scholarly publishing to Open Access. The Sponsoring Consortium for Open Access Publishing in Particle Physics (SCOAP(3)) aims to be a central body to finance peer-review service rather than the purchase of access to information as in the traditional subscription model, with all articles in the discipline eventually available in Open Access. Sustainable funding to SCOAP(3) would come from libraries, library consortia and HEP funding agencies, through a re-direction of funds currently spent for subscriptions to HEP journals. This paper presents the cultural and bibliomet...

  20. Dieci anni dopo la Budapest Open Access Initiative (BOAI10, 2012

    Directory of Open Access Journals (Sweden)

    Redazione JLIS.it

    2012-12-01

    Full Text Available Dieci anni dopo la Budapest Open Access Initiative gli stessi proponenti stendono il piano d'azione portare l'accesso aperto ad essere una pratica consolidata nei prossimi dieci anni.

  1. Usage Trends of Open Access and Local Journals: A Korean Case Study

    National Research Council Canada - National Science Library

    Seo, Jeong-Wook; Chung, Hosik; Yun, Jungmin; Park, Jin Young; Park, Eunsun; Ahn, Yuri

    2016-01-01

    Articles from open access and local journals are important resources for research in Korea and the usage trends of these articles are important indicators for the assessment of the current research practice...

  2. Retrospective of Open Access Repositories and Trends in the Socialization of Knowledge

    National Research Council Canada - National Science Library

    Silvia Irene Adame Rodríguez; Luis Lloréns Baez; Michel Schorr Wiener

    2013-01-01

    .... The aim of this documentary research study is to present an overview of open access digital repositories and some trends in the socialization of knowledge produced by institutions of higher education...

  3. Diagnostic pathology in 2012: development of digital pathology in an open access journal

    Directory of Open Access Journals (Sweden)

    Kayser Klaus

    2013-01-01

    Full Text Available Abstract Herein we describe and interpret the digital world of diagnostic surgical pathology, and take the in Pathology leading Open Access Journal Diagnostic Pathology as example. Virtual slide http://www.diagnosticpathology.diagnomx.eu/vs/1944221953867351

  4. The academic, economic and societal impacts of Open Access: an evidence-based review.

    Science.gov (United States)

    Tennant, Jonathan P; Waldner, François; Jacques, Damien C; Masuzzo, Paola; Collister, Lauren B; Hartgerink, Chris H J

    2016-01-01

    Ongoing debates surrounding Open Access to the scholarly literature are multifaceted and complicated by disparate and often polarised viewpoints from engaged stakeholders. At the current stage, Open Access has become such a global issue that it is critical for all involved in scholarly publishing, including policymakers, publishers, research funders, governments, learned societies, librarians, and academic communities, to be well-informed on the history, benefits, and pitfalls of Open Access. In spite of this, there is a general lack of consensus regarding the potential pros and cons of Open Access at multiple levels. This review aims to be a resource for current knowledge on the impacts of Open Access by synthesizing important research in three major areas: academic, economic and societal. While there is clearly much scope for additional research, several key trends are identified, including a broad citation advantage for researchers who publish openly, as well as additional benefits to the non-academic dissemination of their work. The economic impact of Open Access is less well-understood, although it is clear that access to the research literature is key for innovative enterprises, and a range of governmental and non-governmental services. Furthermore, Open Access has the potential to save both publishers and research funders considerable amounts of financial resources, and can provide some economic benefits to traditionally subscription-based journals. The societal impact of Open Access is strong, in particular for advancing citizen science initiatives, and leveling the playing field for researchers in developing countries. Open Access supersedes all potential alternative modes of access to the scholarly literature through enabling unrestricted re-use, and long-term stability independent of financial constraints of traditional publishers that impede knowledge sharing. However, Open Access has the potential to become unsustainable for research communities if

  5. The academic, economic and societal impacts of Open Access: an evidence-based review

    Science.gov (United States)

    Tennant, Jonathan P.; Waldner, François; Jacques, Damien C.; Masuzzo, Paola; Collister, Lauren B.; Hartgerink, Chris. H. J.

    2016-01-01

    Ongoing debates surrounding Open Access to the scholarly literature are multifaceted and complicated by disparate and often polarised viewpoints from engaged stakeholders. At the current stage, Open Access has become such a global issue that it is critical for all involved in scholarly publishing, including policymakers, publishers, research funders, governments, learned societies, librarians, and academic communities, to be well-informed on the history, benefits, and pitfalls of Open Access. In spite of this, there is a general lack of consensus regarding the potential pros and cons of Open Access at multiple levels. This review aims to be a resource for current knowledge on the impacts of Open Access by synthesizing important research in three major areas: academic, economic and societal. While there is clearly much scope for additional research, several key trends are identified, including a broad citation advantage for researchers who publish openly, as well as additional benefits to the non-academic dissemination of their work. The economic impact of Open Access is less well-understood, although it is clear that access to the research literature is key for innovative enterprises, and a range of governmental and non-governmental services. Furthermore, Open Access has the potential to save both publishers and research funders considerable amounts of financial resources, and can provide some economic benefits to traditionally subscription-based journals. The societal impact of Open Access is strong, in particular for advancing citizen science initiatives, and leveling the playing field for researchers in developing countries. Open Access supersedes all potential alternative modes of access to the scholarly literature through enabling unrestricted re-use, and long-term stability independent of financial constraints of traditional publishers that impede knowledge sharing. However, Open Access has the potential to become unsustainable for research communities if

  6. Implementing an Open Access Policy – Modeling KAUST in the Region

    KAUST Repository

    Baessa, Mohamed A.

    2014-11-12

    The presentation will discuss different open access approaches, and what can well-fit academic and governmental institutions. As a case study of KAUST, presenters will discuss how it can be initiated in a university set-up, how to get academic stakeholder engaged with support, and how the final stage is reached. Details about the KAUST Open Access Policy for research articles, theses and dissertations and the required tools and workflow to implement the policies will be highlighted.

  7. Implementing an Open Access Policy – Modeling KAUST in the Region

    OpenAIRE

    Vijayakumar, J. K.; Baessa, Mohammed

    2014-01-01

    The presentation will discuss different open access approaches, and what can well-fit academic and governmental institutions. As a case study of KAUST, presenters will discuss how it can be initiated in a university set-up, how to get academic stakeholder engaged with support, and how the final stage is reached. Details about the KAUST Open Access Policy for research articles, theses and dissertations and the required tools and workflow to implement the policies will be highlighted.

  8. An Approach to Publish Statistics from Open-Access Journals Using Linked Data Technologies

    OpenAIRE

    Hallo, María; Luján Mora, Sergio; Trujillo Mondéjar, Juan Carlos

    2015-01-01

    Semantic Web encourages digital libraries which include open access journals, to collect, link and share their data across the web in order to ease its processing by machines and humans to get better queries and results. Linked Data technologies enable connecting structured data across the web using the principles and recommendations set out by Tim Berners-Lee in 2006. Several universities develop knowledge, through scholarship and research, under open access policies and use several ways to ...

  9. Human Immunodeficiency Virus Reverse Transcriptase and Protease Sequence Database: an expanded data model integrating natural language text and sequence analysis programs.

    Science.gov (United States)

    Kantor, R; Machekano, R; Gonzales, M J; Dupnik, K; Schapiro, J M; Shafer, R W

    2001-01-01

    The HIV Reverse Transcriptase and Protease Sequence Database is an on-line relational database that catalogs evolutionary and drug-related sequence variation in the human immunodeficiency virus (HIV) reverse transcriptase (RT) and protease enzymes, the molecular targets of anti-HIV therapy (http://hivdb.stanford.edu). The database contains a compilation of nearly all published HIV RT and protease sequences, including submissions from International Collaboration databases and sequences published in journal articles. Sequences are linked to data about the source of the sequence sample and the antiretroviral drug treatment history of the individual from whom the isolate was obtained. During the past year 3500 sequences have been added and the data model has been expanded to include drug susceptibility data on sequenced isolates. Database content has also been integrated with didactic text and the output of two sequence analysis programs.

  10. Open Access Citation Advantage in selected Information Science journals: an extended analysis to altmetrics indicators

    Directory of Open Access Journals (Sweden)

    Paulo Roberto Cintra

    2017-04-01

    Full Text Available Introduction: Open access refers to scientific literature available free of charge and free of copyright restrictions and licensing for its reuse. An increase in the total number of citations received by articles available in open access in relation to those of restricted, pay-walled access is expected, according to the Open Access Citation Advantage hypothesis. Objective: Assess the possible citation advantages and mentions on the social web that open access can offer to the Information Science area. Methodology: Bibliometric and altmetric indicators were analyzed in two journals: Journal of the American Society for Information Science and Scientometrics. Data collection was conducted in the Web of Science, Google Scholar, Altmetric.com and Mendeley. Results: The results indicated that for both journals, open access offers an advantage in the number of citations received by articles. It was also demonstrated that the advantage is maintained over time. Conclusions: This research confirmed the hypothesis of an Open Access Citation Advantage for the journals analyzed in the area of Information Science. This pattern was also observed for the altmetric data.

  11. Mobilising Open Access to Research Data: Recommendations from the RECODE project

    Science.gov (United States)

    Finn, Rachel; Sveinsdottir, Thordis

    2015-04-01

    This paper will introduce the findings and policy recommendations from the FP7 project RECODE (Policy RECommendations for Open Access to Research Data in Europe) which aims to leverage existing networks, communities and projects to address challenges within the open access and data dissemination and preservation sector. We will introduce the key recommendations, which provide solutions relevant to opening access to PSI. The project is built on case study research of five scientific disciplines with the aim of recognizing and working with disciplinary fragmentation associated with open access to research data. The RECODE findings revealed that the mobilisation of open access to research data requires a partnership approach for developing a coherent and flexible ecosystem that is easy and transparent to embed in research practice and process. As such, the development of open access to research data needs to be: • Informed by research practices and processes in different fields • Supported by an integrated institutional and technological data infrastructure and guided by ethical and regulatory frameworks • Underpinned by infrastructure and guiding frameworks that allow for differences in disciplinary research and data management practices • Characterised by a partnership approach involving the key stakeholders, researchers, and institutions The proposed presentation will examine each of these aspects in detail and use information and good practices from the RECODE project to consider how stakeholders within the PSI movement might action each of these points. It will also highlight areas where RECODE findings and good practice recommendations have clear relevance for the PSI sector.

  12. Accuracy Assessments and Validation of an Expanded UV Irradiance Database from Satellite Total Ozone Mapping Spectrometer (TOMS)

    Science.gov (United States)

    Krotkov, N. A.; Herman, J.; Fioletov, V.; Seftor, C.; Larko, D.; Vasilkov, A.

    2004-01-01

    The TOMS UV irradiance database (1978 to 2000) has been expanded to include 5 new products (noon irradiance at 305, 310, 324, and 380 nm, and noon erythemal-weighted irradiance), in addition to the existing erythemal daily exposure, which permit direct Comparisons with ground-based measurements from UV spectrometers. Sensitivity studies are conducted to estimate uncertainties of the new TOMS UV irradiance data due to algorithm apriori assumptions. Comparisons with Brewer spectrometers as well as filter radiometers are used to review of the sources of known errors. Inability to distinguish between snow and cloud cover using only TOMS data results in large errors in estimating surface UV using snow climatology. A correction is suggested for the case when the regional snow albedo is known from an independent source. The summer-time positive bias between TOMS UV estimations and Brewer measurements can be seen at all wavelengths. This suggests the difference is not related to ozone absorption effects. We emphasize that uncertainty of boundary layer UV aerosol absorption properties remains a major source of error in modeling UV irradiance in clear sky conditions. Neglecting aerosol absorption by the present TOMS algorithm results in a positive summertime bias in clear-sky UV estimations over many locations. Due to high aerosol variability the bias is strongly site dependent. Data from UV-shadow-band radiometer and well-calibrated CIMEL sun-sky radiometer are used to quantify the bias at NASA/GSFC site in Greenbelt, MD. Recommendations are given to enable potential users to better account for local conditions by combining standard TOMS UV data with ancillary ground measurements.

  13. Estimating Water Balance Components of Lakes and Reservoirs Using Various Open Access Satellite Databases

    NARCIS (Netherlands)

    Duan, Z.

    2014-01-01

    There are millions of lakes and ten thousands of reservoirs in the world. The number of reservoirs is still increasing through the construction of large dams to meet the growing demand for water resources, hydroelectricity and economic development. Accurate information on the water balance

  14. Strategies for the sustainability of online open-access biodiversity databases

    NARCIS (Netherlands)

    Costello, M.J.; Appeltans, W.; Bailly, N.; Berendsohn, W.G.; de Jong, Y.; Edwards, M.; Froese, R.; Huettmann, F.; Los, W.; Mees, J.; Segers, H.; Bisby, F.A.

    2013-01-01

    Scientists should ensure that high quality research information is readily available on the Internet so society is not dependant on less authoritative sources. Many scientific projects and initiatives publish information on species and biodiversity on the World Wide Web without users needing to pay

  15. Retaking Responsibility for How We Communicate. A Review of Open Access and the Humanities: Contexts, Controversies and the Future

    Directory of Open Access Journals (Sweden)

    James Baker

    2015-06-01

    Full Text Available Since the publication of the Budapest Open Access Initiative statement in 2002, Open Access has grown from an ideal to a reality. Open Access and the Humanities explores scholarly practices, communications, and cultures in light of this change and argues that humanists can and should retake responsibility for how they chose to publish.

  16. How to Select Publisher for Open Access Book and Article ? Problem of Choice or What Author Must Know

    Directory of Open Access Journals (Sweden)

    Dr. Sergey Y. YURISH

    2016-06-01

    Full Text Available Open access (OA is entering steady into engineering sciences, and is now considered as an alternative to the traditional way of publishing monographs, proceedings, handbooks, textbooks, theses and articles. With the ever increasing number of open access publishers it is important to choose the right one. From one hand, a technical simplicity of creating books in pdf format and wide availability of Internet technologies caused many small, so-called “garage-based” publishers. From other hand, almost all established, well known traditional publishers report that it is increasingly difficult to find academic experts willing to review manuscripts, with informal methods such as web searches having to be used to find those to approach. This article is focused on the main requirements, such as quality, connection with learned, professional societies and subject associations, dissemination, print copies, etc. A check list for publisher estimation and example are given. This article will be useful for prospective authors as well as established citation indexes, lists, databases, catalogs, collectors and policemakers to help them to determinea reputated publishers for OA books and articles.

  17. An Open-Access Modeled Passenger Flow Matrix for the Global Air Network in 2010

    Science.gov (United States)

    Huang, Zhuojie; Wu, Xiao; Garcia, Andres J.; Fik, Timothy J.; Tatem, Andrew J.

    2013-01-01

    The expanding global air network provides rapid and wide-reaching connections accelerating both domestic and international travel. To understand human movement patterns on the network and their socioeconomic, environmental and epidemiological implications, information on passenger flow is required. However, comprehensive data on global passenger flow remain difficult and expensive to obtain, prompting researchers to rely on scheduled flight seat capacity data or simple models of flow. This study describes the construction of an open-access modeled passenger flow matrix for all airports with a host city-population of more than 100,000 and within two transfers of air travel from various publicly available air travel datasets. Data on network characteristics, city population, and local area GDP amongst others are utilized as covariates in a spatial interaction framework to predict the air transportation flows between airports. Training datasets based on information from various transportation organizations in the United States, Canada and the European Union were assembled. A log-linear model controlling the random effects on origin, destination and the airport hierarchy was then built to predict passenger flows on the network, and compared to the results produced using previously published models. Validation analyses showed that the model presented here produced improved predictive power and accuracy compared to previously published models, yielding the highest successful prediction rate at the global scale. Based on this model, passenger flows between 1,491 airports on 644,406 unique routes were estimated in the prediction dataset. The airport node characteristics and estimated passenger flows are freely available as part of the Vector-Borne Disease Airline Importation Risk (VBD-Air) project at: www.vbd-air.com/data. PMID:23691194

  18. An open-access endoscopy screen correctly and safely identifies patients for conscious sedation.

    Science.gov (United States)

    Kothari, Darshan; Feuerstein, Joseph D; Moss, Laureen; D'Souza, Julie; Montanaro, Kerri; Leffler, Daniel A; Sheth, Sunil G

    2016-11-01

    Open-access scheduling is highly utilized for facilitating generally low-risk endoscopies. Preprocedural screening addresses sedation requirements; however, procedural safety may be compromised if screening is inaccurate. We sought to determine the reliability of our open-access scheduling system for appropriate use of conscious sedation. We prospectively and consecutively enrolled outpatient procedures booked at an academic center by open-access using screening after in-office gastroenterology (GI) consultation. We collected the cases inappropriately booked for conscious sedation and compared the characteristics for significant differences. A total of 8063 outpatients were scheduled for procedures with conscious sedation, and 5959 were booked with open-access. Only 78 patients (0.97%, 78/8063) were identified as subsequently needing anesthesiologist-assisted sedation; 44 (56.4%, 44/78) were booked through open-access, of which chronic opioid (47.7%, 21/44) or benzodiazepine use (34.1%, 15/44) were the most common reasons for needing anesthesiologist-assisted sedation. Patients on chronic benzodiazepines required more midazolam than those not on chronic benzodiazepines (P = .03) of those patients who underwent conscious sedation. Similarly, patients with chronic opioid use required more fentanyl than those without chronic opioid use (P = .04). Advanced liver disease and alcohol use were common reasons for patients being booked after in-office consultation and were significantly higher than those booked with open-access (both P < .01). We observed that the majority of patients can be triaged for conscious sedation using a multi-tiered screening process. Importantly, few patients (<1.0%) were inappropriately booked for conscious sedation. The most common reasons for considering anesthesiologist-assisted sedation were chronic opioid, benzodiazepine and/or alcohol use and advanced liver disease. This suggests that these entities could be included in screening processes

  19. Supporting open access to clinical trial data for researchers: The Duke Clinical Research Institute-Bristol-Myers Squibb Supporting Open Access to Researchers Initiative.

    Science.gov (United States)

    Pencina, Michael J; Louzao, Darcy M; McCourt, Brian J; Adams, Monique R; Tayyabkhan, Rehbar H; Ronco, Peter; Peterson, Eric D

    2016-02-01

    There are growing calls for sponsors to increase transparency by providing access to clinical trial data. In response, Bristol-Myers Squibb and the Duke Clinical Research Institute have collaborated on a new initiative, Supporting Open Access to Researchers. The aim is to facilitate open sharing of Bristol-Myers Squibb trial data with interested researchers. Key features of the Supporting Open Access to Researchers data sharing model include an independent review committee that ensures expert consideration of each proposal, stringent data deidentification/anonymization and protection of patient privacy, requirement of prespecified statistical analysis plans, and independent review of manuscripts before submission for publication. We believe that these approaches will promote open science by allowing investigators to verify trial results as well as to pursue interesting secondary uses of trial data without compromising scientific integrity. Copyright © 2015 Elsevier Inc. All rights reserved.

  20. A sustainable business model for Open-Access journal publishing a proposed plan for High-Energy Physics

    CERN Document Server

    Vigen, Jens

    2007-01-01

    The High Energy Physics community over the last 15 years has achieved so-called full green Open Access through the wide dissemination of preprints via arXiv, a central subject repository managed by Cornell University. However, green Open Access does not alleviate the economic difficulties of libraries as they are still expected to offer access to versions of record of the peer-reviewed literature. For this reason the particle physics community is now addressing the issue of gold Open Access by converting a set of the existing core journals to Open Access. A Working Party has been established to bring together funding agencies, laboratories and libraries into a single consortium, called SCOAP3 (Sponsoring Consortium for Open Access Publishing in Particle Physics). This consortium will engage with publishers to build a sustainable model for Open Access publishing. In this model, subscription fees from multiple institutions are replaced by contracts with publishers of Open Access journals, where the SCOAP3 conso...

  1. A study of institutional spending on open access publication fees in Germany

    Directory of Open Access Journals (Sweden)

    Najko Jahn

    2016-08-01

    Full Text Available Publication fees as a revenue source for open access publishing hold a prominent place on the agendas of researchers, policy makers, and academic publishers. This study contributes to the evolving empirical basis for funding these charges and examines how much German universities and research organisations spent on open access publication fees. Using self-reported cost data from the Open APC initiative, the analysis focused on the amount that was being spent on publication fees, and compared these expenditure with data from related Austrian (FWF and UK (Wellcome Trust, Jisc initiatives, in terms of both size and the proportion of articles being published in fully and hybrid open access journals. We also investigated how thoroughly self-reported articles were indexed in Crossref, a DOI minting agency for scholarly literature, and analysed how the institutional spending was distributed across publishers and journal titles. According to self-reported data from 30 German universities and research organisations between 2005 and 2015, expenditures on open access publication fees increased over the years in Germany and amounted to € 9,627,537 for 7,417 open access journal articles. The average payment was € 1,298, and the median was € 1,231. A total of 94% of the total article volume included in the study was supported in accordance with the price cap of € 2,000, a limit imposed by the Deutsche Forschungsgemeinschaft (DFG as part of its funding activities for open access funding at German universities. Expenditures varied considerably at the institutional level. There were also differences in how much the institutions spent per journal and publisher. These differences reflect, at least in part, the varying pricing schemes in place including discounted publication fees. With an indexing coverage of 99%, Crossref thoroughly indexed the open access journals articles included in the study. A comparison with the related openly available cost data

  2. Databases

    Directory of Open Access Journals (Sweden)

    Nick Ryan

    2004-01-01

    Full Text Available Databases are deeply embedded in archaeology, underpinning and supporting many aspects of the subject. However, as well as providing a means for storing, retrieving and modifying data, databases themselves must be a result of a detailed analysis and design process. This article looks at this process, and shows how the characteristics of data models affect the process of database design and implementation. The impact of the Internet on the development of databases is examined, and the article concludes with a discussion of a range of issues associated with the recording and management of archaeological data.

  3. The Oxford Probe: an open access five-hole probe for aerodynamic measurements

    Science.gov (United States)

    Hall, B. F.; Povey, T.

    2017-03-01

    The Oxford Probe is an open access five-hole probe designed for experimental aerodynamic measurements. The open access probe can be manufactured by the end user via additive manufacturing (metal or plastic). The probe geometry, drawings, calibration maps, and software are available under a creative commons license. The purpose is to widen access to aerodynamic measurement techniques in education and research environments. There are many situations in which the open access probe will allow results of comparable accuracy to a well-calibrated commercial probe. We discuss the applications and limitations of the probe, and compare the calibration maps for 16 probes manufactured in different materials and at different scales, but with the same geometrical design.

  4. Open Access, library and publisher competition, and the evolution of general commerce

    CERN Document Server

    Odlyzko, Andrew

    2013-01-01

    Discussions of the economics of scholarly communication are usually devoted to Open Access, rising journal prices, publisher profits, and boycotts. That ignores what seems a much more important development in this market. Publishers, through the oft-reviled "Big Deal" packages, are providing much greater and more egalitarian access to the journal literature, an approximation to true Open Access. In the process they are also marginalizing libraries, and obtaining a greater share of the resources going into scholarly communication. This is enabling a continuation of publisher profits as well as of what for decades has been called "unsustainable journal price escalation". It is also inhibiting the spread of Open Access, and potentially leading to an oligopoly of publishers controlling distribution through large-scale licensing. The "Big Deal" practices are worth studying for several general reasons. The degree to which publishers succeed in diminishing the role of libraries may be an indicator of the degree and ...

  5. OpenAIRE - Building a collaborative Open Access infrastructure for European researchers

    Directory of Open Access Journals (Sweden)

    Najla Rettberg

    2012-11-01

    Full Text Available This paper outlines the efforts of the OpenAIRE networking team to establish a Europe-wide open access initiative. OpenAIRE is an effort to realize the open access policies of the European Commission, and has built an infrastructure to support the widest possible dissemination of project results within a certain funding area, FP7. The purpose of the paper is to highlight how such a service can be established through the work of a successful network of European open access contacts and by effective communication with a range of stakeholders. The paper also outlines the flexible technical infrastructure and research activities within the project. Not without its challenges, the approach to tackling existing barriers, such as building repository interoperability, are explored. The paper also introduces the aims and initial activities of the continuation project, OpenAIREplus.

  6. Open Access Publishing in Canada: Current and Future Library and University Press Supports

    Directory of Open Access Journals (Sweden)

    Andrew Waller

    2013-06-01

    Full Text Available Canadian university libraries, Canadian university presses, and non-university scholarly presses at Canadian universities were surveyed in the first part of 2010 as to the level of their support of Open Access (OA journal publishing. Respondents were asked about journal hosting services in their organization as well as their thoughts on internal and external support for open access publishing. Results showed that most of the organizations are hosting OA journals, largely between one and five in number, and many supply journal hosting services, including some technical support. Personnel resources are a notable factor in the ability to host journals. Most respondents engage in some sort of internal support for open access publishing and are open to options that they are presently not utilizing. They are particularly amenable to OA publishing support from outside of their organizations, especially assistance at a consortial level.

  7. Open access behaviours and perceptions of health sciences faculty and roles of information professionals.

    Science.gov (United States)

    Lwoga, Edda T; Questier, Frederik

    2015-03-01

    This study sought to investigate the faculty's awareness, attitudes and use of open access, and the role of information professionals in supporting open access (OA) scholarly communication in Tanzanian health sciences universities. A cross-sectional survey was conducted. Semi-structured interviews were conducted with 16 librarians, while questionnaires were physically distributed to 415 faculty members in all eight Tanzanian health sciences universities, with a response rate of 71.1%. The study found that most faculty members were aware about OA issues. However, the high level of OA awareness among faculty members did not translate into actual dissemination of faculty's research outputs through OA web avenues. A small proportion of faculty's research materials was made available as OA. Faculty were more engaged with OA journal publishing than with self-archiving practices. Senior faculty with proficient technical skills were more likely to use open access than junior faculty. Major barriers to OA usage were related to ICT infrastructure, awareness, skills, author-pay model, and copyright and plagiarism concerns. Interviews with librarians revealed that there was a strong support for promoting OA issues on campus; however, this positive support with various open access-related tasks did not translate into actual action. It is thus important for librarians and OA administrators to consider all these factors for effective implementation of OA projects in research and academic institutions. This is the first comprehensive and detailed study focusing on the health sciences faculty's and librarians' behaviours and perceptions of open access initiatives in Tanzania and reveals findings that are useful for planning and implementing open access initiatives in other institutions with similar conditions. © 2015 Health Libraries Journal.

  8. Missing "Links" in Bioinformatics Education: Expanding Students' Conceptions of Bioinformatics Using a Biodiversity Database of Living and Fossil Reef Corals

    Science.gov (United States)

    Nehm, Ross H.; Budd, Ann F.

    2006-01-01

    NMITA is a reef coral biodiversity database that we use to introduce students to the expansive realm of bioinformatics beyond genetics. We introduce a series of lessons that have students use this database, thereby accessing real data that can be used to test hypotheses about biodiversity and evolution while targeting the "National Science …

  9. Aufkommen von hybridem Open Access in der Schweiz am Beispiel der ETH Zürich

    OpenAIRE

    Christen, Manuela

    2017-01-01

    Mit der Verabschiedung der nationalen Open-Access-Strategie der Schweiz, nach welcher sämtliche öffentlich finanzierten Forschungsarbeiten der Schweiz bis 2024 im Internet frei zugänglich sein sollen, stellt sich für die Schweizer Forschungsinstitutionen und Forschungsförderorganisationen die Frage, ob diese Vision allein mit dem grünen und dem goldenen Weg des Open Access zu realisieren ist oder ob und inwieweit auch der hybride Weg – der nicht zuletzt wegen der höheren Publikationsgebühren ...

  10. The open access regulation in Brazil; A regulacao do livre acesso no Brasil

    Energy Technology Data Exchange (ETDEWEB)

    Andrade, Maisa Medeiros Pacheco de; Siqueira, Mariana de; Xavier, Yanko Marcius de Alencar [Universidade Federal do Rio Grande do Norte (UFRN), Natal, RN (Brazil)

    2008-07-01

    The present research, attempting for the economic relevance of the natural gas sector, for the lack of a law that disciplines it and, still, for the structural question of the natural gas ducts activity; it analyzes the monopoly of the natural gas ducts activity and the mechanism of competition chosen to brighten up it: the open access. The regulation of the open access and the viability that the insert of this practice has to Brazil nowadays are very important points to be discussed and, in that way, the present research also analyses them. (author)

  11. Open access to scientific research: where are we and where are we going? Facts and figures on the occasion of the 2010 Open Access Week (October 18-24).

    Science.gov (United States)

    Giglia, E

    2010-09-01

    This contribution is aimed at presenting a sort of "state of the art" of Open Access on the occasion of the 2010 international Open Access Week, to be held from October 18 to October 24. We shall see facts and figures about open archives and the mandates to deposit; about Open Access journals; about impact and citation advantages for the researchers, and about economic sustainability.

  12. ELAG 2005 Open Access, CERN Geneva, Switzerland, 1-3 June 2005

    CERN Multimedia

    2005-01-01

    ELAG meetings aim at in depth discussions of particular library automation topics and at the promotion of informal exchange of ideas and experience. The topics covered are technical and meant for participants with a computing background. The 29th ELAG Library Systems seminar, is devoted to "Open Access"..

  13. From the Editors: An assessment of open access journals: quality, prestige and social responsibility

    Directory of Open Access Journals (Sweden)

    Pep Simo

    2007-07-01

    Full Text Available This paper presents the new objectives and revises the last volume evolution, analyzing factors like prestige, quality, diffusion and social responsibility in science. It exposes a qualitative analysis of the maturity state like example of open access journal.

  14. Modes of Access: The Influence of Dissemination Channels on the Use of Open Access Monographs

    Science.gov (United States)

    Snijder, Ronald

    2014-01-01

    Introduction: This paper studies the effects of several dissemination channels in an open access environment by analysing the download data of the OAPEN Library. Method: Download data were obtained containing the number of downloads and the name of the Internet provider. Based on public information, each Internet provider was categorised. The…

  15. Publishers' PR Tactic Angers University Presses and Open-Access Advocates

    Science.gov (United States)

    Howard, Jennifer

    2007-01-01

    This article reports on reactions to the Association of American Publishers' new public-relations campaign, which has upset many university presses and research librarians, as well as open-access advocates. The effort, known as the "Partnership for Research Integrity in Science & Medicine," or Prism, is the latest tactic in a continuing…

  16. Design and Implementation of a Library and Information Science Open Access Journal Union Catalogue System

    Directory of Open Access Journals (Sweden)

    Sinn-Cheng Lin

    2017-03-01

    Full Text Available Open access is a mode of academic communication that has been on the rise in recent years, but open access academic resources are widely dispersed across the internet, making it occasionally inconvenient in terms of its use. This research is focused on library and information science, using the OAIS reference model as the system framework, two open access platform, DOAJ and E-LIS as the data sources, and through system implementation develop a “library and information science open access journal union catalogue” system. Using the OAI-PMH protocol as the data interoperability standard, and LAMP as the development environment, four major functionalities: injest, archiving, management and access of information were designed, developed, and integrated into system build. Actual testing and verification showed this system is able to successfully collect data from DOAJ and E-LIS open journal resources related to library and information science. The system is now active and functional, and can be used by researchers in the library and science information field.

  17. Beyond Open Access: (re)use, impact and the ethos of openness in digital editing

    NARCIS (Netherlands)

    Sichani, Anna-Maria

    2016-01-01

    In recent years, concepts such as Open Access, Open Data, Open Source and other open scholarship practices have exerted an increasingly prevalent influence on the digital information environment in which scholarly content is created and disseminated. Originating from academics and libraries calling

  18. Open access initiative and its effect on the quality of scholarly ...

    African Journals Online (AJOL)

    Mostly peer-reviewed articles published between the years 2000-2006 that discuss the Open Access (OA) Movement and its effects on the quality of scholarly communication were used. The peer-review process was critically analyzed for the importance it plays in scholarly literature. The findings indicate that the present ...

  19. Cell Division, a new open access online forum for and from the cell cycle community

    Directory of Open Access Journals (Sweden)

    Kaldis Philipp

    2006-04-01

    Full Text Available Abstract Cell Division is a new, open access, peer-reviewed online journal that publishes cutting-edge articles, commentaries and reviews on all exciting aspects of cell cycle control in eukaryotes. A major goal of this new journal is to publish timely and significant studies on the aberrations of the cell cycle network that occur in cancer and other diseases.

  20. Review Essay: "Open Access" and its Social Context: New Colonialism in the Making?

    Directory of Open Access Journals (Sweden)

    Jaan Valsiner

    2006-03-01

    Full Text Available I claim that what is called "open access" is actually a transformed form of traditional ("closed" access, and is "open" only by its obviously appealing label. As a re-organizational move of institutionalized kind, it benefits the economically powerful—usually "first world" based—research groups and corporations, and leads to new economic limits for the publication of innovative research emanating from less affluent researchers and laboratories. By shifting the costs of scientific publication from the recipients (journal subscribers to the authors of published articles, "open access" creates a social scenario of one-sided information flow rather than a new form of "openness" in scholarly communication. By monopolizing the sources of scientific communication the "open access" initiative defeats its stated purpose. The articles in the reviewed Special Issue of Historische Sozialforschung have productively outlined a whole range of specific issues related to this rapidly developing social movement in scientific communication, but have failed to analyze the wider sociological nature of the ongoing negotiations of the control over scientific communication channels of which the "open access" movement is a part. URN: urn:nbn:de:0114-fqs0602230

  1. AUPress: A Comparison of an Open Access University Press with Traditional Presses

    Science.gov (United States)

    McGreal, Rory; Chen, Nian-Shing

    2011-01-01

    This study is a comparison of AUPress with three other traditional (non-open access) Canadian university presses. The analysis is based on the rankings that are correlated with book sales on Amazon.com and Amazon.ca. Statistical methods include the sampling of the sales ranking of randomly selected books from each press. The results of one-way…

  2. Publishing in Discipline-Specific Open Access Journals: Opportunities and Outreach for Librarians

    Science.gov (United States)

    Tomaszewski, Robert; Poulin, Sonia; MacDonald, Karen I.

    2013-01-01

    Open access (OA) journals promote the opportunity for peer-reviewed journal articles to be freely accessible. In recent years, the number of OA journals has exploded in all disciplines. Previous studies have identified print-based pedagogical discipline-specific journals outside the field of Library and Information Science (LIS) for librarians to…

  3. Juggling copyright and open access in the 21st century: a South African case study

    CSIR Research Space (South Africa)

    Muswelanto, S

    2009-07-01

    Full Text Available With the establishment of an Institutional Repository (IR) one of the first questions the organisation should ask is: ‘How could we promote Open Access (OA) and still adhere to the restrictions of copyright? The Council for Scientific and Industrial...

  4. Indexing the medical open access literature for textual and content-based visual retrieval.

    Science.gov (United States)

    Eggel, Ivan; Müller, Henning

    2010-01-01

    Over the past few years an increasing amount of scientific journals have been created in an open access format. Particularly in the medical field the number of openly accessible journals is enormous making a wide body of knowledge available for analysis and retrieval. Part of the trend towards open access publications can be linked to funding bodies such as the NIH1 (National Institutes of Health) and the Swiss National Science Foundation (SNF2) requiring funded projects to make all articles of funded research available publicly. This article describes an approach to make part of the knowledge of open access journals available for retrieval including the textual information but also the images contained in the articles. For this goal all articles of 24 journals related to medical informatics and medical imaging were crawled from the web pages of BioMed Central. Text and images of the PDF (Portable Document Format) files were indexed separately and a web-based retrieval interface allows for searching via keyword queries or by visual similarity queries. Starting point for a visual similarity query can be an image on the local hard disk that is uploaded or any image found via the textual search. Search for similar documents is also possible.

  5. Does It Make a Sound: Are Open Access Monographs Discoverable in Library Catalogs?

    Science.gov (United States)

    McCollough, Aaron

    2017-01-01

    This article describes an exploratory study examining the common perception among library-based publishers that open access academic publications (especially monographs) are not readily discoverable in library catalogs. Using titles from the Michigan Publishing imprint, digital culture books, the study provides an empirical basis for evaluating…

  6. The Situation of Open Access Institutional Repositories in Spain: 2009 Report

    Science.gov (United States)

    Melero, Remedios; Abadal, Ernest; Abad, Francisca; Rodriguez-Gairin, Josep Manel

    2009-01-01

    Introduction: The DRIVER I project drew up a detailed report of European repositories based on data gathered in a survey in which Spain's participation was very low. This created a highly distorted image of the implementation of repositories in Spain. This study aims to analyse the current state of Spanish open-access institutional repositories…

  7. Institutional Repositories, Open Access, and Scholarly Communication: A Study of Conflicting Paradigms

    Science.gov (United States)

    Cullen, Rowena; Chawner, Brenda

    2011-01-01

    The Open Access movement of the past decade, and institutional repositories developed by universities and academic libraries as a part of that movement, have openly challenged the traditional scholarly communication system. This article examines the growth of repositories around the world, and summarizes a growing body of evidence of the response…

  8. Remote Sensing Open Access Journal: Leading a New Paradigm in Publishing

    Directory of Open Access Journals (Sweden)

    Prasad S. Thenkabail

    2011-12-01

    Full Text Available Remote Sensing is a pathfinding open access journal providing great opportunities for the growing community of remote sensing and geoscience scientists and practitioners to publish high quality research and practical papers expeditiously. It is a journal keeping up with the changing times we live in: open access, instant access, free access, and global access from whichever precise latitude and longitude you live in on the planet Earth or for that matter anywhere in space as long as we have internet access! So, open access journals are breaking many paradigms and setting forth new ones that will soon become the norm as we advance into the twenty-first century. The days of inordinate delays in publishing good science research articles are fast disappearing with open access journals. In remote sensing and geoscience, Remote Sensing (http://www.mdpi.com/journal/remotesensing/ is one of the pioneers, thanks to the vision of Dr. Shu-Kun Lin, the publisher. It started in the year 2009 with headquarters in Basel, Switzerland and a branch office in Beijing, China. It will soon complete Volume 3 by the end of 2011.

  9. Managing an Open Access, Multi-Institutional, International Digital Library: The Digital Library of the Caribbean

    Science.gov (United States)

    Wooldridge, Brooke; Taylor, Laurie; Sullivan, Mark

    2009-01-01

    Developing an Open Access, multi-institutional, multilingual, international digital library requires robust technological and institutional infrastructures that support both the needs of individual institutions alongside the needs of the growing partnership and ensure continuous communication and development of the shared vision for the digital…

  10. Change in Human Technology's Publisher: Continued Focus on Open Access Human–Technology Research

    OpenAIRE

    Pasi,

    2016-01-01

    Beginning January 1, 2017, the role of publisher of the journal Human Technology will be moved from the Agora Center to the Open Science Center at the University of Jyvaskyla because of internal university restructuring. Day-to-day operations and ongoing open access will continue for Human Technology's without interruption.

  11. Using Learning Analytics to Assess Student Engagement and Academic Outcomes in Open Access Enabling Programmes

    Science.gov (United States)

    Atherton, Mirella; Shah, Mahsood; Vazquez, Jenny; Griffiths, Zoe; Jackson, Brian; Burgess, Catherine

    2017-01-01

    Curriculum design, teaching methods, assessments and range of academic support need to be inclusive in Open Access Enabling courses. The findings of this study confirm a correlation between student access to online learning materials and a positive impact on grades in science courses. More specifically, students who frequently use the online…

  12. Researchers' perspectives on open access scholarly communication in Tanzanian public universities

    Directory of Open Access Journals (Sweden)

    F.W. Dulle

    2009-04-01

    Full Text Available This research explored the awareness, usage and perspectives of Tanzanian researchers on open access as a mode of scholarly communication. A survey questionnaire targeted 544 respondents selected through stratified random sampling from a population of 1088 university researchers of the six public universities in Tanzania. With a response rate of 73%, the data were analysed using the Statistical Package for Social Sciences. The study reveals that the majority of the researchers were aware of and were positive towards open access. Findings further indicate that the majority of researchers in Tanzanian public universities used open access outlets more to access scholarly content than to disseminate their own research findings. It seems that most of these researchers would support open access publishing more if issues of recognition, quality and ownership were resolved. Thus many of them supported the idea of establishing institutional repositories at their respective universities as a way of improving the dissemination of local content. The study recommends that public universities and other research institutions in the country should consider establishing institutional repositories, with appropriate quality assurance measures, to improve the dissemination of research output emanating from these institutions.

  13. Csub60/Collapsed Carbon Nanotube Hybrids: A Variant of Peapods (Open Access)

    Science.gov (United States)

    2015-01-02

    Materials Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720, United States ⊥Kavli Energy NanoSciences Institute at...Society 829 DOI: 10.1021/nl503388f Nano Lett. 2015, 15, 829−834 This is an open access article published under a Creative Commons Attribution (CC-BY

  14. The Growing Impact of Open Access Distance Education Journals: A Bibliometric Analysis

    Science.gov (United States)

    Zawacki-Richter, Olaf; Anderson, Terry; Tuncay, Nazime

    2010-01-01

    Open access dissemination resonates with many distance education researchers and practitioners because it aligns with their fundamental mission of extending access to learning opportunity. However, there remains lingering doubt whether this increase in access comes at a cost of reducing prestige, value (often determined in promotion and tenure…

  15. Change in Human Technology's Publisher: Continued focus on open access human–technology research

    Directory of Open Access Journals (Sweden)

    Pasi

    2016-11-01

    Full Text Available Beginning January 1, 2017, the role of publisher of the journal Human Technology will be moved from the Agora Center to the Open Science Center at the University of Jyvaskyla because of internal university restructuring. Day-to-day operations and ongoing open access will continue for Human Technology's without interruption.

  16. Open Access Metadata, Catalogers, and Vendors: The Future of Cataloging Records

    Science.gov (United States)

    Flynn, Emily Alinder

    2013-01-01

    The open access (OA) movement is working to transform scholarly communication around the world, but this philosophy can also apply to metadata and cataloging records. While some notable, large academic libraries, such as Harvard University, the University of Michigan, and the University of Cambridge, released their cataloging records under OA…

  17. Open Access Enabling Courses: Risking Academic Standards or Meeting Equity Aspirations

    Science.gov (United States)

    Shah, Mahsood; Whannell, Robert

    2017-01-01

    Open access enabling courses have experienced growth in Australia. The growth is evidenced in student enrolments and the number of public and private institutions offering such courses. Traditionally these courses have provided a second chance to many students from various equity groups who have been unable to access tertiary education due to poor…

  18. Open Access Research via Collaborative Educational Blogging: A Case Study from Library & Information Science

    Science.gov (United States)

    Rebmann, Kristen Radsliff; Clark, Camden Bernard

    2017-01-01

    This article charts the development of activities for online graduate students in library and information science. Project goals include helping students develop competencies in understanding open access publishing, synthesizing research in the field, and engaging in scholarly communication via collaborative educational blogging. Using a design…

  19. The integration of open access journals in the scholarly communication system: Three science fields

    DEFF Research Database (Denmark)

    Faber Frandsen, Tove

    2009-01-01

    The greatest number of open access journals (OAJs) is found in the sciences and their influence is growing. However, there are only a few studies on the acceptance and thereby integration of these OAJs in the scholarly communication system. Even fewer studies provide insight into the differences...

  20. Forskningsbibliotekerne får travlt, hvis den nationale Open Access strategi skal lykkes

    DEFF Research Database (Denmark)

    Ibanez, Karen Sofie Hytteballe; Sandfær, Anne

    2014-01-01

    Med nedsættelsen af en national styregruppe for Open Access (OA) ser der endelig ud til at ske noget på den front i Danmark. Uddannelses og Forskningsministeriet har, efter at have anbefalinger liggende i skuffen i flere år, nu endelig meldt en national strategi ud. Målet er 80% grøn OA i 2017 og...

  1. Measuring Confidence Levels of Male and Female Students in Open Access Enabling Courses

    Science.gov (United States)

    Atherton, Mirella

    2015-01-01

    The study of confidence was undertaken at the University of Newcastle with students selecting science courses at two campuses. The students were enrolled in open access programs and aimed to gain access to undergraduate studies in various disciplines at University. The "third person effect" was used to measure the confidence levels of…

  2. On Open Access to Research: The Green, the Gold, and the Public Good

    Science.gov (United States)

    Roach, Audra K.; Gainer, Jesse

    2013-01-01

    In this column the authors discuss barriers to worldwide open access to peer-reviewed journal articles online and how they might be addressed by literacy scholars. They highlight economic and ethical problems associated with the current subscription-based system for distributing articles (which sometimes works against the ideals of research and…

  3. News from the Library: Publishing Open Access articles beyond High Energy Physics

    CERN Multimedia

    CERN Library

    2012-01-01

    CERN has supported Open Access Publishing for many years, and the Scientific Information Service is working to implement this vision. We have just launched the flagship project SCOAP3 (Sponsoring Consortium for Open Access Publishing in Particle Physics) aimed at converting high-quality journals in High Energy Physics to Open Access for articles published as of 2014. More details here.   In parallel, several win-win arrangements allow experimental and theoretical high-energy physics results from CERN to be published in Open Access in a variety of high-impact journals. More information can be found here. Open Access publishing at CERN goes far beyond High Energy Physics. Indeed, CERN is a key supporter of Open Access in accelerator science, through sponsorship of the APS journal PRSTAB and participation in the JACoW collaboration. Now CERN authors publishing in the field of engineering will also have th...

  4. A Survey of Physical Sciences, Engineering and Mathematics Faculty Regarding Author Fees in Open Access Journals

    Science.gov (United States)

    Cusker, Jeremy; Rauh, Anne E.

    2014-01-01

    Discussions of the potential of open access publishing frequently must contend with the skepticism of research authors regarding the need to pay author fees (also known as publication fees). With that in mind, the authors undertook a survey of faculty, postdocs, and graduate students in physical science, mathematics, and engineering fields at two…

  5. 50 CFR 660.24 - Limited entry and open access fisheries.

    Science.gov (United States)

    2010-10-01

    ... 50 Wildlife and Fisheries 9 2010-10-01 2010-10-01 false Limited entry and open access fisheries. 660.24 Section 660.24 Wildlife and Fisheries FISHERY CONSERVATION AND MANAGEMENT, NATIONAL OCEANIC AND ATMOSPHERIC ADMINISTRATION, DEPARTMENT OF COMMERCE (CONTINUED) FISHERIES OFF WEST COAST STATES West Coast...

  6. 50 CFR 660.331 - Limited entry and open access fisheries-general.

    Science.gov (United States)

    2010-10-01

    ... 50 Wildlife and Fisheries 9 2010-10-01 2010-10-01 false Limited entry and open access fisheries-general. 660.331 Section 660.331 Wildlife and Fisheries FISHERY CONSERVATION AND MANAGEMENT, NATIONAL OCEANIC AND ATMOSPHERIC ADMINISTRATION, DEPARTMENT OF COMMERCE (CONTINUED) FISHERIES OFF WEST COAST STATES...

  7. Academic Social Networks and Open Access: French Researchers at the Crossroads

    Directory of Open Access Journals (Sweden)

    Christine Okret-Manville

    2016-01-01

    Full Text Available Researchers benefit from an increasing array of tools to enhance direct communication and the dissemination of their research findings. These include Open Access repositories, Open Access journals, or hybrid publishing. For some years, researchers have been using new ways to communicate and share their work by using academic social networks.In an attempt to foster the development of Open Access in France, the French consortium COUPERIN (Unified Consortium of Higher Education and Research Organizations for Access to Numerical Publications proposed that academic social networks could be used to convince researchers of becoming more involved in Open Access. To test this hypothesis, a nationwide survey was launched in 2014 to explore whether and how these academic social networks are used to share content, but also how they compare to other Open Access classic tools. Within a month (20 May to 20 June, 1,898 researchers answered this 28-question survey. It was fully completed by 1,698 of them. This provides COUPERIN with considerable data for analysis. The respondents roughly reflect the composition of the French academic community in terms of gender and research fields, with a slight overrepresentation of young researchers/ PhD candidates.This survey does not, however, cover the in-depth opinions of researchers on Open Access and academic social networks. It therefore only presents general tendencies. Nonetheless, the survey gives many indications as to how researchers apply Open Access. In addition, it shows how they feel about the usefulness of these networks compared to repositories when efficiently disseminating their work. This survey also takes the differences between disciplines into account and characterizes behaviour and opinions according to the different disciplinary communities and their research practices.Finally, this survey allows us to define the main characteristics of a tool which could meet French researchers’ needs for

  8. An investigation of an open-access model for scaling up methadone maintenance treatment.

    Science.gov (United States)

    Madden, Lynn M; Farnum, Scott O; Eggert, Kathryn F; Quanbeck, Andrew R; Freeman, Robert; Ball, Samuel A; Schottenfeld, Richard S; Shi, Julia M; Savage, Mary Ellen; Barry, Declan T

    2018-02-17

    To retrospectively examine patient and programmatic outcomes following the development and implementation of an "open-access" model in which prospective patients were enrolled rapidly in methadone maintenance treatment, irrespective of ability to pay, and provided real-time access to multiple voluntary treatment options. Medical and administrative records were abstracted to compare data for one year before and 9 years after initiating the implementation of an open-access treatment model in May 2007. Methadone maintenance treatment center in Connecticut, USA. Individuals with opioid use disorder entering treatment between July 2006 and June 2015. In June 2015, 64% (n=2,594) of the sample were men, and 80% (n=3,133) reported that they were White. The Network for the Improvement of Addiction Treatment-informed open-access treatment model uses process improvement strategies to imprve treatment access and capacity. Census, wait time, retention, nonmedical opioid use, patient mortality, and financial sustainability (net income and state-block grants as proportions of revenue). In the 9 years following the initial implementation of the open-access model, patient census increased by 183% from 1,431 to 4,051, and average wait-time days decreased from 21 to <1 (same day) without apparent deleterious effects on rates of retention, nonmedical opioid use, or mortality. Between fiscal year (FY) 06 and FY 15, net operating margin rose from 2% to 10%, while state-block grant revenues declined 14% and the proportion of total revenue from state-block grant revenue decreased from 49% to 21%. An open-access model for rapid enrolment of people with opioid use disorder in methadone treatment appears to improve treatment access, treatment and capacity, and financial sustainability without evidence of deleterious effects on treatment outcomes. This article is protected by copyright. All rights reserved.

  9. Open Access Data Centers as an Essential Partner to a Data Publication Journal

    Science.gov (United States)

    Carlson, D.; Pfeiffenberger, H.

    2016-12-01

    The success of Earth System Science Data derives in part from key infrastructure: digital object identifiers (doi) and open access data centers. Our concept that a data journal should promote access and exchange through publication of reviewed data descriptions presupposed third parties to hold the data. As minimum criteria for those data centers we expected international reputation for quality of service and an active lifetime extending at least a decade into the future. We also expected modern access interfaces offering geographic, topical and parameter-based browsing - so that users could discover related holdings through an ESSD link or discover ESSD by way of links in data sets revealed through the center's browse tools - and true open access. True open access means one or two clicks from abstract in ESSD to the data itself without barriers. We started with Pangaea and CDIAC. Data providers already used these centers, the staff welcomed the ESSD initiative and all parties cooperated on doi. With this initial support ESSD proved the basic concept of data publication and demonstrated utility to a larger group of data providers, many of whom suggested additional centers. So long as those data centers met expectations for open access and quality and durability of service, ESSD agreed to collaborate. Through back-door collaborations - e.g. service on particular data sets - ESSD developed working partnerships with more than 30 data centers in 13 countries. Data centers ask to join our list. We encourage those centers to stimulate local providers to submit a data set to ESSD, thus preserving our practical data-set by data-set partnership mode. For a few data centers where national policies impose a registration step, center staff and ESSD editors created bypass access routes to facilitate anonymous reviews. For ESSD purposes, open access and doi cooperation leading to reliable curation allows a win, win, win partnership among centers, providers, and journal.

  10. Open access: are we there yet? - the case of Stellenbosch University, South Africa

    Directory of Open Access Journals (Sweden)

    Reggie Raju

    2012-10-01

    Full Text Available It is often acknowledged that African and other developing countries have a desperate need for quality scholarly information to advance their research output and to make a contribution to the world of scholarly communication. In terms of Africa, South Africa is the most significant producer of research output in sub-Saharan Africa and has, therefore by default, become a beacon of hope for Africa in the area of research production. This case study focuses on the contribution of Stellenbosch University (SU to the African research agenda through making its research output available via two different publishing models. The first model is the hosting and preservation of its research output via an institutional repository (the green route to open access. The second model is hosting and publishing open access journals, following one of two ‘streams’ in the gold route. In this paper, the authors contextualize open access.  The two publishing models in support of the Strategic Plan for the Environment of the Vice Rector (Research are discussed as it applies to SU. The Library’s adoption of the role of ‘publisher’ is also examined. In the case of SU, Open Journal Systems (OJS is the software of choice for hosting open access online journals. The paper provides background on OJS, and also discusses the significance of OJS publishing for the University and its researchers. It concludes with the view that despite the perceived success of the Library and Information Service in making available research output in open access format, there are still many challenges that need to be overcome, and that this process is a continuous one and should remain so in order to continuously take advantage of opportunities offered by evolving technology.

  11. Perspectives in understanding open access to research data - infrastructure and technology challenges

    Science.gov (United States)

    Bigagli, Lorenzo; Sondervan, Jeroen

    2014-05-01

    The Policy RECommendations for Open Access to Research Data in Europe (RECODE) project, started in February 2013 with a duration of two years, has the objective to identify a series of targeted and over-arching policy recommendations for Open Access to European research data, based on existing good practice and addressing such hindering factors as stakeholder fragmentation, technical and infrastructural issues, ethical and legal issues, and financial and institutional policies. In this work we focus on the technical and infrastructural aspect, where by "infrastructure" we mean the technological assets (hardware and software), the human resources, and all the policies, processes, procedures and training for managing and supporting its continuous operation and evolution. The context targeted by RECODE includes heterogeneous networks, initiatives, projects and communities that are fragmented by discipline, geography, stakeholder category (publishers, academics, repositories, etc.) as well as other boundaries. Many of these organizations are already addressing key technical and infrastructural barriers to Open Access to research data. Such barriers may include: lack of automatic mechanisms for policy enforcement, lack of metadata and data models supporting open access, obsolescence of infrastructures, scarce awareness about new technological solutions, lack of training and/or expertise on IT and semantics aspects. However, these organizations are often heterogeneous and fragmented by discipline, geography, stakeholder category (publishers, academics, repositories, etc.) as well as other boundaries, and often work in isolation, or with limited contact with one another. RECODE has addressed these challenges, and the possible solutions to mitigate them, engaging all the identified stakeholders in a number of ways, including an online questionnaire, case studies interviews, literature review, a workshop. The conclusions have been validated by the RECODE Advisory Board and

  12. Short communication: Evaluation of MALDI-TOF mass spectrometry and a custom reference spectra expanded database for the identification of bovine-associated coagulase-negative staphylococci.

    Science.gov (United States)

    Cameron, M; Perry, J; Middleton, J R; Chaffer, M; Lewis, J; Keefe, G P

    2018-01-01

    This study evaluated MALDI-TOF mass spectrometry and a custom reference spectra expanded database for the identification of bovine-associated coagulase-negative staphylococci (CNS). A total of 861 CNS isolates were used in the study, covering 21 different CNS species. The majority of the isolates were previously identified by rpoB gene sequencing (n = 804) and the remainder were identified by sequencing of hsp60 (n = 56) and tuf (n = 1). The genotypic identification was considered the gold standard identification. Using a direct transfer protocol and the existing commercial database, MALDI-TOF mass spectrometry showed a typeability of 96.5% (831/861) and an accuracy of 99.2% (824/831). Using a custom reference spectra expanded database, which included an additional 13 in-house created reference spectra, isolates were identified by MALDI-TOF mass spectrometry with 99.2% (854/861) typeability and 99.4% (849/854) accuracy. Overall, MALDI-TOF mass spectrometry using the direct transfer method was shown to be a highly reliable tool for the identification of bovine-associated CNS. Copyright © 2018 American Dairy Science Association. Published by Elsevier Inc. All rights reserved.

  13. 10 years experience with pioneering open access publishing in health informatics: the Journal of Medical Internet Research (JMIR).

    Science.gov (United States)

    Eysenbach, Gunther

    2010-01-01

    Peer-reviewed journals remain important vehicles for knowledge transfer and dissemination in health informatics, yet, their format, processes and business models are changing only slowly. Up to the end of last century, it was common for individual researchers and scientific organizations to leave the business of knowledge transfer to professional publishers, signing away their rights to the works in the process, which in turn impeded wider dissemination. Traditional medical informatics journals are poorly cited and the visibility and uptake of articles beyond the medical informatics community remain limited. In 1999, the Journal of Medical Internet Research (JMIR; http://www.jmir.org) was launched, featuring several innovations including 1) ownership and copyright retained by the authors, 2) electronic-only, "lean" non-for-profit publishing, 3) openly accessible articles with a reversed business model (author pays instead of reader pays), 4) technological innovations such as automatic XML tagging and reference checking, on-the-fly PDF generation from XML, etc., enabling wide distribution in various bibliographic and full-text databases. In the past 10 years, despite limited resources, the journal has emerged as a leading journal in health informatics, and is presently ranked the top journal in the medical informatics and health services research categories by impact factor. The paper summarizes some of the features of the Journal, and uses bibliometric and access data to compare the influence of the Journal on the discipline of medical informatics and other disciplines. While traditional medical informatics journals are primarily cited by other Medical Informatics journals (33%-46% of citations), JMIR papers are to a more often cited by "end-users" (policy, public health, clinical journals), which may be partly attributable to the "open access advantage".

  14. Open Access to research data - final perspectives from the RECODE project

    Science.gov (United States)

    Bigagli, Lorenzo; Sondervan, Jeroen

    2015-04-01

    Many networks, initiatives, and communities are addressing the key barriers to Open Access to data in scientific research. These organizations are typically heterogeneous and fragmented by discipline, location, sector (publishers, academics, data centers, etc.), as well as by other features. Besides, they often work in isolation, or with limited contacts with one another. The Policy RECommendations for Open Access to Research Data in Europe (RECODE) project, which will conclude in the first half of 2015, has scoped and addressed the challenges related to Open Access, dissemination and preservation of scientific data, leveraging the existing networks, initiatives, and communities. The overall objective of RECODE was to identify a series of targeted and over-arching policy recommendations for Open Access to European research data based on existing good practice. RECODE has undertaken a review of the existing state of the art and examined five case studies in different scientific disciplines: particle physics and astrophysics, clinical research, medicine and technical physiology (bioengineering), humanities (archaeology), and environmental sciences (Earth Observation). In particular for the latter discipline, GEOSS has been an optimal test bed for investigating the importance of technical and multidisciplinary interoperability, and what the challenges are in sharing and providing Open Access to research data from a variety of sources, and in a variety of formats. RECODE has identified five main technological and infrastructural challenges: • Heterogeneity - relates to interoperability, usability, accessibility, discoverability; • Sustainability - relates to obsolescence, curation, updates/upgrades, persistence, preservation; • Volume - also related to Big Data, which is somehow implied by Open Data; in our context, it relates to discoverability, accessibility (indexing), bandwidth, storage, scalability, energy footprint; • Quality - relates to completeness

  15. Bibliotheken unterstützen Open Access-Zeitschriften: eine Bedarfsabklärung

    Directory of Open Access Journals (Sweden)

    Alice Keller

    2015-12-01

    Full Text Available Der Aufsatz beschreibt eine Studie zur Herausgabe von Open-Access-Zeitschriften an der Universität Zürich. Er geht der Frage nach, welche Bedürfnisse Open-Access-Zeitschriften bzw. ihre Herausgeber haben und welche publikationsunterstützenden Services infolgedessen von Universitätsbibliotheken angeboten werden sollten. Die Studie umfasste zwei Teile: eine ausführliche Online-Evaluation der Zeitschriften und ihrer Funktionalitäten sowie Einzelinterviews mit den Herausgebern. Die Resultate zeigen, dass eine sehr grosse Heterogenität besteht hinsichtlich der Funktionalitäten, der technischen Plattformen, der Finanzierungsmodelle, sowie der Anbindung an Verlag oder Bibliothek. Insbesondere Zeitschriften, die weder einem Verlag noch einer Bibliothek angegliedert sind, weisen Lücken bei den Funktionalitäten und der Nachhaltigkeit auf. Insgesamt stellen die fehlenden finanziellen Ressourcen für viele Herausgeber die größte Sorge dar. Außerdem fehlen den Herausgebern Ansprechpersonen und sie fühlen sich in ihrer Publikationstätigkeit zum Teil sehr allein gelassen. Die Migration einer Open-Access-Zeitschrift auf ein durch die Bibliothek betriebenes Journal Management System stellt insbesondere für Herausgeber von nicht-affiliierten Zeitschriften (also Zeitschriften, die nicht von einem Verlag oder einer Bibliothek unterstützt werden eine interessante Option dar, birgt aus Sicht der Herausgeber aber auch die Gefahr des Verlusts der Unabhängigkeit und bedeutet für sie zusätzlichen Arbeitsaufwand und/oder Kosten. The article describes research on the publication of open access journals at the University of Zurich, Switzerland. In the course of the study, the needs of open access journals, or rather the needs of their respective editors, were evaluated. Based on these perceived needs, the author discusses what kind of publishing support services academic libraries should offer. The study comprised two approaches: a comprehensive online

  16. Global review of open access risk assessment software packages valid for global or continental scale analysis

    Science.gov (United States)

    Daniell, James; Simpson, Alanna; Gunasekara, Rashmin; Baca, Abigail; Schaefer, Andreas; Ishizawa, Oscar; Murnane, Rick; Tijssen, Annegien; Deparday, Vivien; Forni, Marc; Himmelfarb, Anne; Leder, Jan

    2015-04-01

    Over the past few decades, a plethora of open access software packages for the calculation of earthquake, volcanic, tsunami, storm surge, wind and flood have been produced globally. As part of the World Bank GFDRR Review released at the Understanding Risk 2014 Conference, over 80 such open access risk assessment software packages were examined. Commercial software was not considered in the evaluation. A preliminary analysis was used to determine whether the 80 models were currently supported and if they were open access. This process was used to select a subset of 31 models that include 8 earthquake models, 4 cyclone models, 11 flood models, and 8 storm surge/tsunami models for more detailed analysis. By using multi-criteria analysis (MCDA) and simple descriptions of the software uses, the review allows users to select a few relevant software packages for their own testing and development. The detailed analysis evaluated the models on the basis of over 100 criteria and provides a synopsis of available open access natural hazard risk modelling tools. In addition, volcano software packages have since been added making the compendium of risk software tools in excess of 100. There has been a huge increase in the quality and availability of open access/source software over the past few years. For example, private entities such as Deltares now have an open source policy regarding some flood models (NGHS). In addition, leaders in developing risk models in the public sector, such as Geoscience Australia (EQRM, TCRM, TsuDAT, AnuGA) or CAPRA (ERN-Flood, Hurricane, CRISIS2007 etc.), are launching and/or helping many other initiatives. As we achieve greater interoperability between modelling tools, we will also achieve a future wherein different open source and open access modelling tools will be increasingly connected and adapted towards unified multi-risk model platforms and highly customised solutions. It was seen that many software tools could be improved by enabling user

  17. Building it together: collaboration in university-based open access book publishing

    Directory of Open Access Journals (Sweden)

    Dr Andrea Hacker

    2014-04-01

    Full Text Available Open access (OA book publishing in the humanities and social sciences is becoming technically more feasible and financially more desirable. After securing funding for the development of a business model based on a pilot book series, the University of Heidelberg is joining this development and building an infrastructure to publish OA books on campus. The challenges facing such new publishing outlets are considerable. This article argues that the best strategy to build the prestige, affordability and competitiveness necessary to succeed is collaboration. Accomplishing this within the OA community will prove less difficult than extending collaboration beyond it because many agencies and individuals still lack information about, and are often unconvinced of, the merits of open access. The key lies in offering excellence in manuscript development to revitalize the most important collaboration of all: that between publisher and author.

  18. Open Access Intellectual Property Systems: A Comparison to Commercial Solutions in Competitive Intelligence

    Directory of Open Access Journals (Sweden)

    Jan Cerny

    2016-07-01

    Full Text Available ICT/IS management plays an important role within the framework of innovation management, and one of the key elements of this role is the support of Competitive Intelligence in the context of innovation processes. The strategic information needs of innovation management are also directed towards different kinds of intellectual property (IP information entities and commercialization. The purpose of this paper is to define these entities and IP information systems as an important part of a company’s Competitive Intelligence Unit for competitor analysis and technology trends. The open access IP information systems will be analysed together with commercial solutions.. The aim of this paper is to underline the importance of open access IP systems compared to added value commercial solutions for competitive intelligence purposes for SMEs. The comparison will be carried out using examples of patent searches within a concrete dataset.

  19. Welcome to Lubricants, a New Open Access Journal for Interdisciplinary Research in the Field of Tribology

    Directory of Open Access Journals (Sweden)

    James E. Krzanowski

    2012-07-01

    Full Text Available Welcome to Lubricants, a new open access journal for researchers and practitioners working in the field of tribology. The journal will publish peer-reviewed research papers, reviews, letters and communications, as well as papers on research ideas and proposals. The concept of open access is exciting because it allows free access of all publications to anyone, resulting in the widest dissemination possible for the authors publishing in the journal. In addition, publication is rapid, and full use can be made of color figures which are published at no additional cost to the authors. The contents of the journal will nonetheless be archival and articles can therefore have a long-term impact. [...

  20. Stem cell research funding policies and dynamic innovation: a survey of open access and commercialization requirements.

    Science.gov (United States)

    Lévesque, Maroussia; Kim, Jihyun Rosel; Isasi, Rosario; Knoppers, Bartha Maria; Plomer, Aurora; Joly, Yann

    2014-08-01

    This article compares and contrasts the pressures of both open access data sharing and commercialization policies in the context of publicly funded embryonic stem cell research (SCR). First, normative guidelines of international SCR organizations were examined. We then examined SCR funding guidelines and the project evaluation criteria of major funding organizations in the EU, the United Kingdom (UK), Spain, Canada and the United States. Our survey of policies revealed subtle pressures to commercialize research that include: increased funding availability for commercialization opportunities, assistance for obtaining intellectual property rights (IPRs) and legislation mandating commercialization. In lieu of open access models, funders are increasingly opting for limited sharing models or "protected commons" models that make the research available to researchers within the same region or those receiving the same funding. Meanwhile, there still is need for funding agencies to clarify and standardize terms such as "non-profit organizations" and "for-profit research," as more universities are pursuing for-profit or commercial opportunities.

  1. Examining publishing practices: moving beyond the idea of predatory open access

    OpenAIRE

    Smith, Kevin L.

    2017-01-01

    The word ‘predatory’ has become an obstacle to a serious discussion of publishing practices. Its use has been both overinclusive, encompassing practices that, while undesirable, are not malicious, and underinclusive, missing many exploitative practices outside the open access sphere. The article examines different business models for scholarly publishing and considers the potential for abuse with each model. After looking at the problems of both blacklists and so-called ‘whitelists’, the auth...

  2. Open access to documentation forms and item catalogs in healthcare. Memorandum "Open Metadata"

    OpenAIRE

    Dugas, Martin; Jöckel, Karl-Heinz; Gefeller, Olaf; Knaup-Gregori, Petra; Friede, Tim; Ammenwerth, Elske; Kieser, Meinhard; Prokosch, Hans-Ulrich

    2014-01-01

    Currently, most of the documentation forms and item catalogs in healthcare are not accessible to the public. This applies both to clinical information systems and case report forms (CRFs) from studies. Open access to medical documentation forms could substantially improve information systems in healthcare and networked medical research. Therefore it should be implemented, wherever possible from a legal point of view. Derzeit ist der Großteil von Formularen und Merkmalskatalogen im Gesundhe...

  3. A system for success: BMC Systems Biology, a new open access journal

    Directory of Open Access Journals (Sweden)

    Webb Penelope A

    2007-09-01

    Full Text Available Abstract BMC Systems Biology is the first open access journal spanning the growing field of systems biology from molecules up to ecosystems. The journal has launched as more and more institutes are founded that are similarly dedicated to this new approach. BMC Systems Biology builds on the ongoing success of the BMC series, providing a venue for all sound research in the systems-level analysis of biology.

  4. Some trends in electronic publication and Open Access in Portuguese history journals

    OpenAIRE

    Guardado, Cristina; Borges, Maria Manuel

    2012-01-01

    In the last decades, ICT development and the use of computer networks led to major changes in the way scientists communicate the results of their researches. One of the most important transformations occurred in scholarly communication through the acceleration in the unbounded disclosure of scientific information (open access). However, the adoption of new channels varies according to the scientific areas. This study is part of an ongoing research that aims to understand the impact of digital...

  5. For the Public Good: Research Impact and the Promise of Open Access

    OpenAIRE

    DePauw, Karen P.; Seyam, Mohammed; Roy, Siddhartha; Abbas, Montasir; Hole, Brian; Potter, Peter

    2016-01-01

    As a land-grant institution, Virginia Tech is committed to research that meaningfully engages with the vital concerns of our day such as feeding, building, and empowering a healthy world. How does Virginia Tech’s commitment to engagement fit with the Open Access vision for unrestricted online access to scholarly research? Have OA journals, public repositories, and federal mandates simply made a researcher’s life more complicated or could OA be the key to unlocking research impact on a global ...

  6. Polymers – A New Open Access Scientific Journal on Polymer Science

    Directory of Open Access Journals (Sweden)

    Shu-Kun Lin

    2009-12-01

    Full Text Available Polymers is a new interdisciplinary, Open Access scientific journal on polymer science, published by Molecular Diversity Preservation International (MDPI. This journal welcomes manuscript submissions on polymer chemistry, macromolecular chemistry, polymer physics, polymer characterization and all related topics. Both synthetic polymers and natural polymers, including biopolymers, are considered. Manuscripts will be thoroughly peer-reviewed in a timely fashion, and papers will be published, if accepted, within 6 to 8 weeks after submission. [...

  7. Inducing optimal substitution between antibiotics under open access to the resource of antibiotic susceptibility.

    Science.gov (United States)

    Herrmann, Markus; Nkuiya, Bruno

    2017-06-01

    This paper designs a bio-economic model to examine the use of substitute antibiotic drugs (analogs) sold by an industry that has open access to the resource of the antibiotic class's susceptibility (treatment effectiveness). Antibiotics are characterized by different expected recovery rates and production costs, which in conjunction with the class's treatment susceptibility determines their relative effectiveness. Our analysis reveals that the high-quality antibiotic drug loses its comparative advantage over time making the low-quality drug the treatment of last resort in the market equilibrium and the social optimum when antibiotic susceptibility cannot replenish. However, when antibiotic susceptibility is renewable, both antibiotics may be used in the long run, and the comparative advantage of the high-quality drug may be restored in the social optimum that allows lowering infection in the long run. We develop the optimal tax/subsidy scheme that would induce antibiotic producers under open access to behave optimally and account for the social cost of infection and value of antibiotic susceptibility. We show that the welfare loss associated with the uncorrected open-access allocation is highest; when the resource of antibiotic susceptibility is non-renewable, high morbidity costs are incurred by individuals, and low social discount rates apply. Copyright © 2016 John Wiley & Sons, Ltd. Copyright © 2016 John Wiley & Sons, Ltd.

  8. Open access to an outpatient intravenous diuresis program in a systolic heart failure disease management program.

    Science.gov (United States)

    Hebert, Kathy; Dias, Andre; Franco, Emiliana; Tamariz, Leonardo; Steen, Dylan; Arcement, Lee M

    2011-01-01

    In order to provide efficient utilization of resources in an outpatient setting for acute exacerbation of heart failure (HF), the authors piloted an open-access outpatient intravenous (IV) diuretic program (IVDP) to evaluate utilization in an HF disease management program (HFDMP), patient characteristics for users of the program, and safety. An outpatient HFDMP at Jackson Memorial Hospital in Miami, Florida, enrolling 577 patients 18 years and older with an ejection fraction ≤40% was implemented. For symptoms or weight gain ≥5 pounds, patients were eligible to use an open-access IVDP during clinic hours. A total of 130 HFDM patients (22.5%) used the IVDP. IVDP users were more likely to be diabetic, with lower body mass indices than non-IVDP users. New York Heart Association class IV patients and previously hospitalized patients were more likely to use the IVDP. There were no documented adverse reactions for patients receiving treatment and no difference in mortality between groups. This open-access outpatient IVDP model for patients with HF was readily utilized by the HFDMP participants and appears safe for use in this population. This unique model may provide alternative access for acute HF treatment. Congest Heart Fail. © 2011 Wiley Periodicals, Inc.

  9. Brexit – and its potential impact for open access in the UK

    Directory of Open Access Journals (Sweden)

    Paul Ayris

    2017-03-01

    Full Text Available This article looks at the possible implications of Brexit for approaches to open access (OA in the UK. It begins by sketching current issues in Brexit debates at the end of 2016 as the context into which discussions about open access are then placed. Issues in four thematic areas are analysed: OA policies and mandates, EU copyright reform, new OA publishing models and open science. The level of dependence in the UK on European developments is assessed in each case and its contribution to Brexit issues identified. The paper concludes that Brexit presents not only challenges, but also opportunities which the UK could seize. In open access, the UK is already playing a leadership role. In areas of open science, particularly in relation to the European Open Science Cloud, it is the European Commission which is asserting leadership. The UK needs to consolidate its current activity and ensure that, whatever the nature of Brexit arrangements, its freedom does not lead to isolation.

  10. Open access, library and publisher competition, and the evolution of general commerce.

    Science.gov (United States)

    Odlyzko, Andrew M

    2015-02-01

    Discussions of the economics of scholarly communication are usually devoted to Open Access, rising journal prices, publisher profits, and boycotts. That ignores what seems a much more important development in this market. Publishers, through the oft-reviled Big Deal packages, are providing much greater and more egalitarian access to the journal literature, an approximation to true Open Access. In the process, they are also marginalizing libraries and obtaining a greater share of the resources going into scholarly communication. This is enabling a continuation of publisher profits as well as of what for decades has been called "unsustainable journal price escalation." It is also inhibiting the spread of Open Access and potentially leading to an oligopoly of publishers controlling distribution through large-scale licensing. The Big Deal practices are worth studying for several general reasons. The degree to which publishers succeed in diminishing the role of libraries may be an indicator of the degree and speed at which universities transform themselves. More importantly, these Big Deals appear to point the way to the future of the whole economy, where progress is characterized by declining privacy, increasing price discrimination, increasing opaqueness in pricing, increasing reliance on low-paid or unpaid work of others for profits, and business models that depend on customer inertia. © The Author(s) 2014.

  11. 'Predatory' open access: a longitudinal study of article volumes and market characteristics.

    Science.gov (United States)

    Shen, Cenyu; Björk, Bo-Christer

    2015-10-01

    A negative consequence of the rapid growth of scholarly open access publishing funded by article processing charges is the emergence of publishers and journals with highly questionable marketing and peer review practices. These so-called predatory publishers are causing unfounded negative publicity for open access publishing in general. Reports about this branch of e-business have so far mainly concentrated on exposing lacking peer review and scandals involving publishers and journals. There is a lack of comprehensive studies about several aspects of this phenomenon, including extent and regional distribution. After an initial scan of all predatory publishers and journals included in the so-called Beall's list, a sample of 613 journals was constructed using a stratified sampling method from the total of over 11,000 journals identified. Information about the subject field, country of publisher, article processing charge and article volumes published between 2010 and 2014 were manually collected from the journal websites. For a subset of journals, individual articles were sampled in order to study the country affiliation of authors and the publication delays. Over the studied period, predatory journals have rapidly increased their publication volumes from 53,000 in 2010 to an estimated 420,000 articles in 2014, published by around 8,000 active journals. Early on, publishers with more than 100 journals dominated the market, but since 2012 publishers in the 10-99 journal size category have captured the largest market share. The regional distribution of both the publisher's country and authorship is highly skewed, in particular Asia and Africa contributed three quarters of authors. Authors paid an average article processing charge of 178 USD per article for articles typically published within 2 to 3 months of submission. Despite a total number of journals and publishing volumes comparable to respectable (indexed by the Directory of Open Access Journals) open access

  12. A sustainable business model for Open-Access journal publishing: a proposed plan for High-Energy Physics

    Directory of Open Access Journals (Sweden)

    Jens Vigen

    2008-01-01

    Full Text Available The High Energy Physics community over the last 15 years has achieved so-called full green Open Access through the wide dissemination of preprints via arXiv, a central subject repository managed by Cornell University. However, green Open Access does not alleviate the economic difficulties of libraries as they are still expected to offer access to versions of record of the peer-reviewed literature. For this reason the particle physics community is now addressing the issue of gold Open Access by converting a set of the existing core journals to Open Access. A Working Party has been established to bring together funding agencies, laboratories and libraries into a single consortium, called SCOAP3 (Sponsoring Consortium for Open Access Publishing in Particle Physics. This consortium will engage with publishers to build a sustainable model for Open Access publishing. In this model, subscription fees from multiple institutions are replaced by contracts with publishers of Open Access journals, where the SCOAP3 consortium is a single financial partner.

  13. Discriminating Between Legitimate and Predatory Open Access Journals: Report from the International Federation for Emergency Medicine Research Committee

    Directory of Open Access Journals (Sweden)

    Bhakti Hansoti

    2016-09-01

    Full Text Available Introduction: Open access (OA medical publishing is growing rapidly. While subscription-based publishing does not charge the author, OA does. This opens the door for “predatory” publishers who take authors’ money but provide no substantial peer review or indexing to truly disseminate research findings. Discriminating between predatory and legitimate OA publishers is difficult. Methods: We searched a number of library indexing databases that were available to us through the University of California, Irvine Libraries for journals in the field of emergency medicine (EM. Using criteria from Jeffrey Beall, University of Colorado librarian and an expert on predatory publishing, and the Research Committee of the International Federation for EM, we categorized EM journals as legitimate or likely predatory. Results: We identified 150 journal titles related to EM from all sources, 55 of which met our criteria for OA (37%, the rest subscription based. Of these 55, 25 (45% were likely to be predatory. We present lists of clearly legitimate OA journals, and, conversely, likely predatory ones. We present criteria a researcher can use to discriminate between the two. We present the indexing profiles of legitimate EM OA journals, to inform the researcher about degree of dissemination of research findings by journal. Conclusion: OA journals are proliferating rapidly. About half in EM are legitimate. The rest take substantial money from unsuspecting, usually junior, researchers and provide no value for true dissemination of findings. Researchers should be educated and aware of scam journals.

  14. COMMENTARY: OPEN ACCESS TO RESEARCH AND THE INDIVIDUAL RESPONSIBILITY OF RESEARCHERS

    Directory of Open Access Journals (Sweden)

    Thierry Chanier

    2007-02-01

    Full Text Available Readers of Language Learning & Technology are undoubtedly aware of the debate raging through the international research community about open (i.e., free access to research and knowledge. As readers of the journal, we may not feel very concerned with this debate, because when LLT was established in 1997 (and ALSIC Journal in 1998 it seemed natural that articles should be freely accessible from every part of the network. But this perspective is misleading. First, it is important to recognize that LLT, Alsic, and 2000 open access (OA journals are the exception and not the rule among the 25,000 peer-reviewed journals. Secondly, like it or not, we are directly concerned individually as researchers at several levels. * As readers, we face potential restrictions in access to publications and data in our field as well as to tools that could support our research and teaching. * As authors we seek being published not only in journals that have good reputations but also that have a large audience so that our work can be cited. Citation is becoming an important feature of the research evaluation process of individuals as well as of institutions, and OA offers an impact advantage (OpCit, 2006. * As citizens, when our salary and research are paid for out of public funds, we are often responsible for giving free access to our work as requested by research agencies, provided we can actually use our Intellectual Property Rights (IPR and not forfeit their use when signing publishers' copyrights agreements.We have the hardware and software solutions to guarantee open access. But social and economic models are well entrenched in the scientific publishing world. I would like to describe here, from a researcher’s standpoint, two ways to open access: the so called "green" and "gold" roads to OA (open archives and OA journals and the obstacles that stand in the way.

  15. Stakeholder values and ecosystems in developing open access to research data.

    Science.gov (United States)

    Wessels, Bridgette; Sveinsdottir, Thordis; Smallwood, Rod

    2014-05-01

    One aspect of understanding how to develop open access to research data is to understand the values of stakeholders in the emerging open data ecosystem. The EU FP7 funded project Policy RECommendations for Open Access to Research Data in Europe (RECODE) (Grant Agreement No: 321463) undertook such research to identify stakeholder values and mapped the emerging ecosystem. In this paper we outline and discuss the findings of this research. We address three key objectives, which are: (a) the identification and mapping of the diverse range of stakeholder values in Open Access data and data dissemination and preservation; (b) mapping stakeholder values on to research ecosystems using case studies from different disciplinary perspectives; and (c) evaluate and identify good practice in addressing conflicting value chains and stakeholder fragmentation. The research was structured on three related actions: (a) an analysis of policy and related documents and protocols, in order to map the formal expression of values and motivations; (b) conducting five case studies in particle physics, health sciences, bioengineering, environmental research and archaeology. These explored issues of data size; quality control, ethics and data security; replication of large datasets; interoperability; and the preservation of diverse types of data; and (c) undertaking a validation and dissemination workshop that sought to better understand how to match policies with stakeholder drivers and motivations to increase their effectiveness in promoting Open Access to research data. The research findings include that there is clearly an overall drive for Open Data Access within the policy documents, which is part of a wider drive for open science in general. This is underpinned by the view of science as an open enterprise. Although there is a strong argument for publicly funded science to be made open to the public the details of how to make research data open as yet still unclear. Our research found

  16. Free Open Access Med(ical edu)cation for critical care practitioners.

    Science.gov (United States)

    Olusanya, Olusegun; Day, James; Kirk-Bayley, Justin; Szakmany, Tamas

    2017-02-01

    Free Open Access Med(ical edu)cation refers to an online community of knowledge relating to medicine. Originating from practitioners in emergency medicine, it has since spread to critical care, internal medicine, prehospital medicine, paediatrics, and allied health professionals and continues to grow at an advanced rate. Weblogs ('blog' for short), emails, social media (in particular Twitter), recorded audio material ((podcasts), and video material are all produced on a daily basis and contribute to the continual professional development of trainees and consultants worldwide. In this article, we explain its background, rise to prominence, and explore some of its controversies.

  17. A comparison of an open access university press with traditional presses: Two years later

    OpenAIRE

    R. McGreal; N.S. Chen; T. McNamara

    2012-01-01

    This study is a comparison of AUPress with three other traditional (non-open access) Canadian university presses. The analysis is based on the rankings that are correlated with book sales on Amazon.com and Amazon.ca. Statistical methods include the sampling of the sales ranking of randomly selected books from each press. The results of one-way ANOVA analyses show that there is no significant difference in the ranking of printed books sold by AUPress in comparison with traditional university p...

  18. Retrospective of Open Access Repositories and Trends in the Socialization of Knowledge

    Directory of Open Access Journals (Sweden)

    Silvia Irene Adame Rodríguez

    2013-08-01

    Full Text Available While searching for information on the Web is an everyday activity, finding free, reliable and quality information is a challenge, hence the interest in sharing part of a research project about repositories. The aim of this documentary research study is to present an overview of open access digital repositories and some trends in the socialization of knowledge produced by institutions of higher education, which in some way already mark a path toward a culture of sharing and reusing scientific, academic and cultural information for the benefit of the academic community and the general public.

  19. ZB MED – Open-Access-Publikationsspezialist für die Lebenswissenschaften

    Directory of Open Access Journals (Sweden)

    Arning, Ursula

    2016-12-01

    Full Text Available PUBLISSO – the portal for open access publishing by ZB MED – Leibniz Information Centre for Life Sciences actively shapes the digital change by promoting a free and transparent culture in science. The publication of journal articles, contributions to (teaching books and research data goes along with advice and scientific quality assurance by peer reviews. By the allocation of persistent identifiers publications become long-term accessible and citable. Furthermore new formats such as the preparation for text and data mining will be provided.

  20. Scientific knowledge unchained: verso una policy dell’università italiana sull’Open Access

    OpenAIRE

    Caso, Roberto

    2013-01-01

    Lo scopo di questo scritto è mettere in luce quel che il diritto formale può fare a favore dell’Open Access (OA). La tesi di fondo è che il diritto formale - la legge, i regolamenti, i contratti - può rappresentare un formidabile ausilio all’affermazione del principio dell’accesso aperto, ma che il definitivo successo dell’OA risiede in un radicale cambiamento delle norme informali che presidiano le prassi dell’editoria scientifica. Un tale mutamento dipende dalle dinamiche di potere nell...

  1. A Real-Time Open Access Platform Towards Proof of Concept for Smart Grid Applications

    DEFF Research Database (Denmark)

    Kemal, Mohammed Seifu; Petersen, Lennart; Iov, Florin

    2018-01-01

    This paper presents development of real time open access platform towards proof of concept of smart grid applications deployed at Smart Energy System Laboratory of Aalborg University. Discussed on the paper is the architecture and set-up of the platform by elaborating the three main layers...... grid components is presented. A detailed model description of the whole set up and the corresponding functionalities is characterized. To showcase real life application of the whole framework, an overview of two test cases implemented for European SmartC2Net project with focus on control and market...

  2. The Next Information Revolution - How Open Access repositories and Journals will Transform Scholarly Communications

    Directory of Open Access Journals (Sweden)

    David Prosser

    2003-09-01

    Full Text Available Complaints about spiralling serials costs, lack of service from large commercial publishers, and the inability to meet the information needs of researchers are not new. Over the past few years, however, we have begun to see new models develop that better serve the information needs academics as both authors and readers. The internet is now being used in ways other than just to provide electronic facsimiles of print journals accessed using the traditional subscription models. Authors can now self-archive their own work making it available to millions and new open access journals extend this by providing a peer-review service to ensure quality control.

  3. The Economics of Open-Access Fisheries: Subsidies and Performance of Vietnamese Fisheries

    OpenAIRE

    Nguyen, Ngoc Duy

    2016-01-01

    Paper III and IV of this thesis are not available in Munin.Paper III. Nguyen Ngoc Duy and Ola Flåten. Profitability effects and fishery subsidies: Average treatment effects based on propensity scores. (Manuscript)Paper IV: Nguyen Ngoc Duy and Ola Flåten. Efficiency analysis of fisheries using stock proxies. (Manuscript). Published version available in Fisheries Research 181 (2016) 102–113 This dissertation focuses on analysing the economics of an open-access fishery and on evaluating the e...

  4. Es ist das Einfache, das schwer zu machen ist – Open Access im wissenschaftlichen Publikationsprozess / It is the simple things that are hard to do: Open Access and scholarly publications

    Directory of Open Access Journals (Sweden)

    Böske, Julia

    2010-11-01

    Full Text Available In the last years the scientific system of publication was challenged increasingly. Open Access – the free access to scientific information – has contributed a lot to it. Therefore is a profound discussion with the phenomenon Open Access worthwhile. In this context the business model of traditional publishing is compared to that of the Open Access. This comparison should give the impulse to think over the interpretation of the Open Access referring to the Berlin Declaration and to open to new forms of the Open Access. However, for this purpose existing enemy images must be destroyed which were aroused since the last years above all between commercial publishing companies and the science. In this respect the following implementations are not only a dialogue help, but they also refresh the legitimization of commercial publishing companies in the publication process and offer them a new action basis. Because Open Access should be understood not only as a danger – above all it is a challenge and chance for the continuity of commercial scientific publishing companies. The point is that it is possible to break into electronic markets of tomorrow.

  5. OA 2014-5 Dataset - Limited Entry and Open Access cost earnings survey collecting 2014-15 data

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — This project collects economic data from vessel owners participating in the West Coast limited entry fixed gear and open access groundfish, salmon, crab, and shrimp...

  6. Managing open access: the first year of managing RCUK and Wellcome Trust OA funding at the University of Glasgow Library

    Directory of Open Access Journals (Sweden)

    Susan Ashworth

    2014-11-01

    Full Text Available Many institutions have been awarded funds by the Research Councils UK (RCUK, in the form of a block grant, to cover the costs of article processing charges (APCs for open access (OA. This article discusses how this grant (and also the open access fund awarded by the Wellcome Trust is being managed at the University of Glasgow. It looks at the overall policy for managing these funds at the University and at the systems and processes set in place by the University Library to deal with this new area of activity. There are significant challenges for institutions in managing individual APCs and the article discusses some of these challenges. The new Research Excellence Framework (REF policy on open access was introduced in March 2014 and will have implications for the management of open access by institutions. Finally, the paper looks at where next for OA management at the University.

  7. Open access to large scale datasets is needed to translate knowledge of cancer heterogeneity into better patient outcomes.

    Directory of Open Access Journals (Sweden)

    Andrew H Beck

    2015-02-01

    Full Text Available In this guest editorial, Andrew Beck discusses the importance of open access to big data for translating knowledge of cancer heterogeneity into better outcomes for cancer patients.

  8. Libraries Can Make Open Access Happen Today by Simply Redirecting Subscription Funds: An Update on the SCOAP3 Initiative

    CERN Document Server

    Gentil-Beccot, Anne

    2008-01-01

    This article reviews the SCOAP3 initiative which aims to redirect the subscription funds used for the core journals in High Energy Physics, to make them Open Access. This model re-interprets the role of librarians in the Open Access debate. As they are the pivot of the current system, by keeping the lifeblood of scientific information flowing to their scientists, the authors argue that they are the best placed to make it change and take advantage of it.

  9. Open access to scientific publications - an analysis of the barriers to change

    Directory of Open Access Journals (Sweden)

    Professor Bo-Christer Björk

    2004-01-01

    Full Text Available One of the effects of the Internet is that the dissemination of scientific publications in a few years has migrated to electronic formats. The basic business practices between libraries and publishers for selling and buying the content have, however, not changed much. Scientists have in protest against the high subscription prices of mainstream publishers started Open Access (OA journals and e-print repositories, which distribute scientific information freely. Despite widespread agreement among academics that OA would be the optimal distribution mode for publicly financed research results, OA channels still constitute only a marginal phenomenon in the global scholarly communication system. This paper discusses, in view of the experiences of the last ten years, the many barriers hindering a rapid proliferation of Open Access. The discussion is structured according to the main OA channels; peer-reviewed journals for primary publishing, subject-specific and institutional repositories for secondary parallel publishing. It also discusses the types of barriers, which can be classified as: legal framework, IT-infrastructure, business models, indexing services and standards, academic reward system, marketing and critical mass.

  10. The CT Scanner Facility at Stellenbosch University: An open access X-ray computed tomography laboratory

    Energy Technology Data Exchange (ETDEWEB)

    Plessis, Anton du, E-mail: anton2@sun.ac.za [CT Scanner Facility, Central Analytical Facilities, Stellenbosch University, Stellenbosch (South Africa); Physics Department, Stellenbosch University, Stellenbosch (South Africa); Roux, Stephan Gerhard le, E-mail: lerouxsg@sun.ac.za [CT Scanner Facility, Central Analytical Facilities, Stellenbosch University, Stellenbosch (South Africa); Guelpa, Anina, E-mail: aninag@sun.ac.za [CT Scanner Facility, Central Analytical Facilities, Stellenbosch University, Stellenbosch (South Africa)

    2016-10-01

    The Stellenbosch University CT Scanner Facility is an open access laboratory providing non-destructive X-ray computed tomography (CT) and a high performance image analysis services as part of the Central Analytical Facilities (CAF) of the university. Based in Stellenbosch, South Africa, this facility offers open access to the general user community, including local researchers, companies and also remote users (both local and international, via sample shipment and data transfer). The laboratory hosts two CT instruments, i.e. a micro-CT system, as well as a nano-CT system. A workstation-based Image Analysis Centre is equipped with numerous computers with data analysis software packages, which are to the disposal of the facility users, along with expert supervision, if required. All research disciplines are accommodated at the X-ray CT laboratory, provided that non-destructive analysis will be beneficial. During its first four years, the facility has accommodated more than 400 unique users (33 in 2012; 86 in 2013; 154 in 2014; 140 in 2015; 75 in first half of 2016), with diverse industrial and research applications using X-ray CT as means. This paper summarises the existence of the laboratory’s first four years by way of selected examples, both from published and unpublished projects. In the process a detailed description of the capabilities and facilities available to users is presented.

  11. Editorial: Models, technologies and approaches toward widening the open access to learning and education

    Directory of Open Access Journals (Sweden)

    Rachid Benlamri

    2016-03-01

    Full Text Available This special issue is devoted to novel models and technologies as well as current methodical approaches and best practices in the field of Open Learning and Open Education as enablers of personal growth, social inclusion, open innovation, and sustainable economic development in the challenging conditions of globalization and world-wide competition in productivity and services. The Open Access to Learning and Education embraces not only various technologies, such as mobile and intelligent technologies, content and data management, user-centered design, but also diverse directions of use, such as e-learning and training, organizational development, Massive Open Online Courses, special needs education, all building an excellent basis for various educational and business arrangements that widen the learning and education opportunities for all people around the globe. Against this background, this special issue demonstrates the immense speed and relentlessness of the Open Access concept growth presenting a wide range of examples toward supporting competency and skills development to ensure highly capable human capital, and solve individual, business, urban, demographic, health as well as social inclusion issues in today’s highly demanding digital economy environment.

  12. Comparison of Traditional and Open-Access Appointment Scheduling for Exponentially Distributed Service Time

    Directory of Open Access Journals (Sweden)

    Chongjun Yan

    2015-01-01

    Full Text Available This paper compares the performance measures of traditional appointment scheduling (AS with those of an open-access appointment scheduling (OA-AS system with exponentially distributed service time. A queueing model is formulated for the traditional AS system with no-show probability. The OA-AS models assume that all patients who call before the session begins will show up for the appointment on time. Two types of OA-AS systems are considered: with a same-session policy and with a same-or-next-session policy. Numerical results indicate that the superiority of OA-AS systems is not as obvious as those under deterministic scenarios. The same-session system has a threshold of relative waiting cost, after which the traditional system always has higher total costs, and the same-or-next-session system is always preferable, except when the no-show probability or the weight of patients’ waiting is low. It is concluded that open-access policies can be viewed as alternative approaches to mitigate the negative effects of no-show patients.

  13. Recommendations for mass spectrometry data quality metrics for open access data (corollary to the Amsterdam Principles).

    Science.gov (United States)

    Kinsinger, Christopher R; Apffel, James; Baker, Mark; Bian, Xiaopeng; Borchers, Christoph H; Bradshaw, Ralph; Brusniak, Mi-Youn; Chan, Daniel W; Deutsch, Eric W; Domon, Bruno; Gorman, Jeff; Grimm, Rudolf; Hancock, William; Hermjakob, Henning; Horn, David; Hunter, Christie; Kolar, Patrik; Kraus, Hans-Joachim; Langen, Hanno; Linding, Rune; Moritz, Robert L; Omenn, Gilbert S; Orlando, Ron; Pandey, Akhilesh; Ping, Peipei; Rahbar, Amir; Rivers, Robert; Seymour, Sean L; Simpson, Richard J; Slotta, Douglas; Smith, Richard D; Stein, Stephen E; Tabb, David L; Tagle, Danilo; Yates, John R; Rodriguez, Henry

    2012-02-03

    Policies supporting the rapid and open sharing of proteomic data are being implemented by the leading journals in the field. The proteomics community is taking steps to ensure that data are made publicly accessible and are of high quality, a challenging task that requires the development and deployment of methods for measuring and documenting data quality metrics. On September 18, 2010, the U.S. National Cancer Institute (NCI) convened the "International Workshop on Proteomic Data Quality Metrics" in Sydney, Australia, to identify and address issues facing the development and use of such methods for open access proteomics data. The stakeholders at the workshop enumerated the key principles underlying a framework for data quality assessment in mass spectrometry data that will meet the needs of the research community, journals, funding agencies, and data repositories. Attendees discussed and agreed up on two primary needs for the wide use of quality metrics: (1) an evolving list of comprehensive quality metrics and (2) standards accompanied by software analytics. Attendees stressed the importance of increased education and training programs to promote reliable protocols in proteomics. This workshop report explores the historic precedents, key discussions, and necessary next steps to enhance the quality of open access data. By agreement, this article is published simultaneously in the Journal of Proteome Research, Molecular and Cellular Proteomics, Proteomics, and Proteomics Clinical Applications as a public service to the research community. The peer review process was a coordinated effort conducted by a panel of referees selected by the journals.

  14. The Biomedical Data Journal in the New Era of Open Access to Scientific Information

    Directory of Open Access Journals (Sweden)

    Iordanis Mourouzis

    2015-08-01

    Full Text Available The new scientific landscape requires fuller and wider access to scientific infor­mation and research data as an important means to accelerate innovation and im­prove transparency of the scientific process. In this emerging environment, the new publication model of data journals will play a key role by establishing high standards for dataset publication and promoting the deserved credit and recognition to au­thors. Biomedical Data Journal (BMDJ is an open access journal aiming to facilitate the presentation, validation, use, and re-use of datasets with focus on publishing biomedical datasets that can serve as a source for simulation and computational modelling of diseases and biological processes. The rise of computational science could lead to exciting developments in the field of biomedical research. BMDJ has the ambition to pave the way in this direction through meeting the existing need for high-quality, well structured, open-access, biomedical datasets. BMDJ has estab­lished a new approach that includes a number of initiatives to potentiate the use of data papers as a source of new scientific creation, to maximize reach and visibility of data publications and to introduce formal citation of data papers. Sufficient motiva­tion for researchers to release high quality experimental biomedical data goes through providing the respective credit and recognition to authors of data papers.

  15. Open Access Publishing in High-Energy Physics the SCOAP$^{3}$ model

    CERN Document Server

    Mele, S

    2009-01-01

    The Open Access (OA) movement is gaining an increasing momentum: its goal is to grant anyone, anywhere and anytime free access to the results of publicly funded scientific research. The High- Energy Physics (HEP) community has pioneered OA for decades, through its widespread “pre-print culture”. After almost half a century of worldwide dissemination of pre-prints, in paper first and electronically later, OA journals are becoming the natural evolution of scholarly communication in HEP. Among other OA business models, the one based on a sponsoring consortium appears as the most viable option for a transition of the HEP peer-reviewed literature to OA. The Sponsoring Consortium for Open Access Publishing in Particle Physics (SCOAP3) is proposed as a central body to remunerate publishers for their peer-review service, effectively replacing the “reader-pays” model of traditional subscriptions with an “author-side” funding, without any direct financial burden on individual authors and research groups. Su...

  16. Operational Experience of an Open-Access, Subscription-Based Mass Spectrometry and Proteomics Facility

    Science.gov (United States)

    Williamson, Nicholas A.

    2018-01-01

    This paper discusses the successful adoption of a subscription-based, open-access model of service delivery for a mass spectrometry and proteomics facility. In 2009, the Mass Spectrometry and Proteomics Facility at the University of Melbourne (Australia) moved away from the standard fee for service model of service provision. Instead, the facility adopted a subscription- or membership-based, open-access model of service delivery. For a low fixed yearly cost, users could directly operate the instrumentation but, more importantly, there were no limits on usage other than the necessity to share available instrument time with all other users. All necessary training from platform staff and many of the base reagents were also provided as part of the membership cost. These changes proved to be very successful in terms of financial outcomes for the facility, instrument access and usage, and overall research output. This article describes the systems put in place as well as the overall successes and challenges associated with the operation of a mass spectrometry/proteomics core in this manner.

  17. Meeting on establishing a sponsoring consortium for Open Access publishing in particle physics, 3rd November 2006, CERN. Minutes

    CERN Document Server

    Yeomans, Joanne

    2006-01-01

    In December 2005 a Task Force on Open Access Publishing in Particle Physics was set up, and it produced its report in June 2006. Its main conclusion was that a sponsorship model was the most appropriate for the transition period to full Open Access. The present meeting was called to discuss the formation of a consortium (SCOAP3) that could coordinate this sponsorship. Representatives from major European particle physics funding agencies, library consortia and the research community attended. In the past year, many more physics publishers have introduced Open Access options of one kind or another. It is fairly clear that these moves have been a direct consequence of the discussion on Open Access in the particle physics research community. The maintenance of a peer-review system for quality assurance, currently carried out by the publishers, was felt to be an essential element to preserve in the transition to Open Access. A move to full Open Access, rather than the hybrid variety currently proposed by several p...

  18. Il Freemium come modello economico sostenibile per la pubblicazione digitale Open Access nelle scienze umanistiche e sociali

    Directory of Open Access Journals (Sweden)

    Pierre Mounier

    2013-03-01

    Full Text Available Between the two paths of open access – green and gold – the latter is the harder to develop and has less support from the research community. The main difficulty lies in finding a sound economic model. Open Access journals usually depend on two funding sources: subsidies and/or donations from institutions and publication fees from research units in the author-pay model. These two ways of funding Open Access journals and books have proved effective in some cases (Plos, but are not flawless. The Center for Open Electronic Publishing, a French initiative for Open Access publishing in humanities and social sciences, has recently developed a new economic model based on “Freemium” for its full Open Access journal and book series, in order to address two issues: improve their economic soundness and give them more visibility in libraries. Freemium, a blend of “free” and “premium”, preserves the information side of Open Access as well as premium service marketing.

  19. Paradigma do Acesso Aberto (Open Access: alguns apontamentos para os estudiosos do turismo no Brasil

    Directory of Open Access Journals (Sweden)

    Cristina Marques Gomes

    2010-09-01

    Full Text Available ResumoO presente artigo versa sobre o Paradigma do Acesso Aberto (ou Open Access – OA traçando um panorama geral sobre os movimentos e iniciativas, como e em quais contextos os mesmos surgiram, quais são os conceitos envolvidos nos debates em torno da temática, as linhas de atuação, os principais manifestos, argumentações teóricas, pesquisadores, dentre outros aspectos, com o objetivo de contribuir para debates ulteriores sobre as interfaces da Ciência da Informação e do Turismo. Apresenta os sub-itens “Acesso Aberto (Open Access: Conceitos, Movimentos e Iniciativas” e “Vias Verde e Dourada”, culminando com as Considerações Finais sobre o tema.Palavras-Chave: turismo; acesso aberto; Vias Verde e Dourada. AbstractThis article is about the Open Access Paradigm (or just AO, delineating a general panorama about movements and enterprises, how and in which contexts they arised, which are the involved concepts in discussion about the issue, the actuation lines, the main manifests, the theoretical argumentation, the researcheres, among other aspects, holping to contribute to ulterior discussion about Information Science and Tourism interfaces. Features the secondary items “Open Access: Concepts, Movements and Open Access in the Natural and Social Sciences: The Correspondence of Innovative Moves to Enhance Access, Inclusion and Impact in Scholarly Communication

    Science.gov (United States)

    Armbruster, Chris

    2008-01-01

    Online, open access is the superior model for scholarly communication. A variety of scientific communities in physics, the life sciences and economics have gone furthest in innovating their scholarly communication through open access, enhancing accessibility for scientists, students and the interested public. Open access enjoys a comparative…

  1. Just Roll with It? Rolling Volumes vs. Discrete Issues in Open Access Library and Information Science Journals

    Directory of Open Access Journals (Sweden)

    Jill Cirasella

    2013-08-01

    Full Text Available INTRODUCTION Articles in open access (OA journals can be published on a rolling basis, as they become ready, or in complete, discrete issues. This study examines the prevalence of and reasons for rolling volumes vs. discrete issues among scholarly OA library and information science (LIS journals based in the United States. METHODS A survey was distributed to journal editors, asking them about their publication model and their reasons for and satisfaction with that model. RESULTS Of the 21 responding journals, 12 publish in discrete issues, eight publish in rolling volumes, and one publishes in rolling volumes with an occasional special issue. Almost all editors, regardless of model, cited ease of workflow as a justification for their chosen publication model, suggesting that there is no single best workflow for all journals. However, while all rolling-volume editors reported being satisfied with their model, satisfaction was less universal among discrete-issue editors. DISCUSSION The unexpectedly high number of rolling-volume journals suggests that LIS journal editors are making forward-looking choices about publication models even though the topic has not been much addressed in the library literature. Further research is warranted; possibilities include expanding the study’s geographic scope, broadening the study to other disciplines, and investigating publication model trends across the entire scholarly OA universe. CONCLUSION Both because satisfaction is high among editors of rolling-volume journals and because readers and authors appreciate quick publication times, the rolling-volume model will likely become even more prevalent in coming years.

  2. Open Access Complements Interlibrary Loan Services, but Additional User Education is

    Directory of Open Access Journals (Sweden)

    Richard Hayman

    2016-03-01

    Full Text Available Objective – To examine interlibrary loan (ILL request rates for open access (OA materials and determine how OA may affect resource sharing. This research updates the author’s previous study. Design – Quantitative analysis. Setting – A large, urban, public research university library system in the United States of America. Subjects – 1,557 open access ILL material requests among 23,531 total ILL requests submitted during the 2012 and 2013 fiscal years (July 2011-June 2013. Methods – The library has tracked and recorded OA requests that appear among ILL material requests since 2009. Using OCLC’s ILLiad software to manage ILL requests, they have implemented two custom routines. One routine is for open access searching on standard items, and uses software plugins to search across various open resources. All materials published prior to 1923 are treated as being in the public domain, so requests for these materials are automatically routed to this queue. The second custom routine is used for searching for OA electronic theses and dissertations, and is employed when the requested resource is not found in the library’s subscription resources. Other article requests are routed to the RapidILL service for open access availability. Main Results – The research presented reveals that ILL requests for OA materials exhibited a steady increase year over year, while overall ILL requests decreased slightly. This finding is true both for the fiscal years reported in this study and also the years since the author’s original study in 2011 (Baich, 2012. Of the 1,557 OA requests examined, 72% (n=1,135 were for journal articles, 8% (n=125 were for books or book chapters, 9% (n=140 were for theses or dissertations, 3% (n=54 were for conference papers, and 7% (n=105 were for reports. Library staff typically fill these article requests using gold OA or green OA sources. The researcher notes the difficulty in refining by source, though confirmed that

  3. Implementasi dan Evaluasi Kinerja Direct Sequence Spread Spectrum menggunakan Wireless Open-Access Research Platform (WARP

    Directory of Open Access Journals (Sweden)

    Aditya Sukmana Putra

    2015-03-01

    Full Text Available Dalam sistem komunikasi nirkabel, khususnya pada dunia komunikasi taktis atau militer, salah satu yang harus dihadapi adalah gangguan jamming.Salah satu sistem yang dapat mengatasi masalah tersebut adalah Direct Sequence Spread Spectrum (DSSS dimana informasi akan dikalikan secara langsung dengan pseudo-noise sequence yang mempunyai laju chip jauh lebih besar.Sistem ini dapat diimplementasikan pada Wireless Open-Access Research Platform (WARP yang merupakan salah satu dari jenis Software Define Radio (SDR.Modul WARP mampu diprogram secara langsung dengan software MATLAB.Kinerja sistem terbaik didapatkan ketika daya sinyal jamming lebih kecil atau sama dengan daya sinyal carrier sistem DSSS. Pada Single Tone Jamming (STJ sistem akan mencapai nilai BER 10E-3  saat daya sinyal jamming 125 % dari daya sinyal sistem DSSS, sedangkan pada Multi Tone Jamming (MTJ sistem akan mencapai BER 10E-3  saat daya sinyal jamming 100 % dari daya sistem DSSS.

  4. Open Access Forever -- Or Five Years, Whichever Comes First: Progress on Preserving the Digital Scholarly Record

    CERN Multimedia

    CERN. Geneva

    2007-01-01

    As the migration of scholarly communication from print to digital continues to progress rapidly, and as Open Access to that research literature and related data becomes more common, the challenges of insuring that the scholarly record remain available over time becomes more urgent. There has been good progress on those challenges in recent years, but many problems remain. The current state of the curation and preservation of digital scholarship over its entire lifecycle will be reviewed, and progress on problems of specific interest to scholarly communication will be examined. The difficulty of curating the digital scholarly record and preserving it for future generations has important implications for the movement to make that record more open and accessible to the world, so this a timely topic for those who are interested in the future of scholarly communication. View Mackensie Smith's biography

  5. Computation: A New Open Access Journal of Computational Chemistry, Computational Biology and Computational Engineering

    Directory of Open Access Journals (Sweden)

    Karlheinz Schwarz

    2013-09-01

    Full Text Available Computation (ISSN 2079-3197; http://www.mdpi.com/journal/computation is an international scientific open access journal focusing on fundamental work in the field of computational science and engineering. Computational science has become essential in many research areas by contributing to solving complex problems in fundamental science all the way to engineering. The very broad range of application domains suggests structuring this journal into three sections, which are briefly characterized below. In each section a further focusing will be provided by occasionally organizing special issues on topics of high interests, collecting papers on fundamental work in the field. More applied papers should be submitted to their corresponding specialist journals. To help us achieve our goal with this journal, we have an excellent editorial board to advise us on the exciting current and future trends in computation from methodology to application. We very much look forward to hearing all about the research going on across the world. [...

  6. Supporting the advancement of science: Open access publishing and the role of mandates

    Directory of Open Access Journals (Sweden)

    Phelps Lisa

    2012-01-01

    Full Text Available Abstract In December 2011 the United States House of Representatives introduced a new bill, the Research Works Act (H.R.3699, which if passed could threaten the public's access to US government funded research. In a digital age when professional and lay parties alike look more and more to the online environment to keep up to date with developments in their fields, does this bill serve the best interests of the community? Those in support of the Research Works Act argue that government open access mandates undermine peer-review and take intellectual property from publishers without compensation, however journals like Journal of Translational Medicine show that this is not the case. Journal of Translational Medicine in affiliation with the Society for Immunotherapy of Cancer demonstrates how private and public organisations can work together for the advancement of science.

  7. Standardized quality assurance forms for organ transplantations with multilingual support, open access and UMLS coding.

    Science.gov (United States)

    Varghese, Julian; Sünninghausen, Sarah Schulze; Dugas, Martin

    2015-01-01

    Quality assurance (QA) is a key factor to evaluate success of organ transplantations. In Germany QA documentation is progressively developed and enforced by law. Our objective is to share QA models from Germany in a standardized format within a form repository for world-wide reuse and exchange. Original QA forms were converted into standardized study forms according to the Operational Data Model (ODM) and shared for open access in an international forms repository. Form elements were translated into English and semantically enriched with Concept Unique Identifiers from the Unified Medical Language System (UMLS) based on medical expert decision. All forms are available on the web as multilingual ODM documents. UMLS concept coverage analysis indicates 92% coverage with few but critically important definition gaps. New content and infrastructure for harmonized documentation forms is provided in the domain of organ transplantations enabling world-wide reuse and exchange.

  8. An open access pilot freely sharing cancer genomic data from participants in Texas.

    Science.gov (United States)

    Becnel, Lauren B; Pereira, Stacey; Drummond, Jennifer A; Gingras, Marie-Claude; Covington, Kyle R; Kovar, Christie L; Doddapaneni, Harsha Vardhan; Hu, Jianhong; Muzny, Donna; McGuire, Amy L; Wheeler, David A; Gibbs, Richard A

    2016-02-16

    Genomic data sharing in cancer has been restricted to aggregate or controlled-access initiatives to protect the privacy of research participants. By limiting access to these data, it has been argued that the autonomy of individuals who decide to participate in data sharing efforts has been superseded and the utility of the data as research and educational tools reduced. In a pilot Open Access (OA) project from the CPRIT-funded Texas Cancer Research Biobank, many Texas cancer patients were willing to openly share genomic data from tumor and normal matched pair specimens. For the first time, genetic data from 7 human cancer cases with matched normal are freely available without requirement for data use agreements nor any major restriction except that end users cannot attempt to re-identify the participants (http://txcrb.org/open.html).

  9. Proposal to establish a Sponsoring Consortium for Open Access Publishing in Particle Physics

    CERN Document Server

    CERN. Geneva

    2007-01-01

    In the present proposal, the publishers' subscription income from multiple institutions is replaced by an "author-side" funding. Journals are paid through contracts between publishers and a single financial partner, the "Sponsoring Consortium for Open Access Publishing in Particle Physics" (SCOAP3). SCOAP3 is envisioned as a global network of funding agencies, research laboratories, and libraries that will contribute the necessary funding; each SCOAP3 partner will recover its contribution from the cancellation of journal subscriptions. This model avoids the obvious disadvantage of authors being directly charged for the OA publication of their articles, which is perceived as an even higher barrier than subscription charges, in particular for theoretical physicists from small institutions who account for the vast majority of HEP papers. The financing and governance of SCOAP3 will follow as much as possible the example of the memoranda of understanding governing large research collaborations. Its partners will c...

  10. Why open access? The policy environment and process on one university campus

    Directory of Open Access Journals (Sweden)

    Kevin L Smith

    2012-11-01

    Full Text Available When the Academic Council at Duke University adopted an open access policy in March 2010, they both enacted a legal mechanism for archiving scholarship in Duke's institutional repository and expressed a set of values in regard to access to research. From the legal perspective, the policy grants to the University a license to archive all peer-reviewed scholarly articles in the DukeSpace repository, which is managed by the University Libraries. That license is broad, but there were clear limitations on its implementation expressed by the Academic Council. From the point of view of values, this policy is a clear statement that research is undertaken for the benefit of society as a whole, and that improving access to the products of that research is beneficial to the researchers themselves, to the University and to the global community. This article explores the path Duke followed to develop and implement such a policy.

  11. Open access to scientific articles: a review of benefits and challenges.

    Science.gov (United States)

    Björk, Bo-Christer

    2017-03-01

    The Internet has fundamentally changed the publishing of scholarly peer reviewed journals, and the way readers find and access articles. Digital access is nowadays the norm, in particular for researchers. The Internet has enabled a totally new business model, Open Access (OA), in which an article is openly available in full text for anyone with Internet access. This article reviews the different options to achieve this, whether by journals changing their revenue structures from subscription to publishing charges, or authors utilizing a number of options for posting OA versions of article manuscripts in repositories. It also discusses the regrettable emergence of "predatory" publishers, who spam academics, and make money by promising them rapid publication with only the semblance of peer review. The situation is further discussed from the viewpoints of different stakeholders, including academics as authors and readers, practicing physicians and the general public.

  12. Open Access Integrated Therapeutic and Diagnostic Platforms for Personalized Cardiovascular Medicine

    Directory of Open Access Journals (Sweden)

    Todd T. Schlegel

    2013-08-01

    Full Text Available It is undeniable that the increasing costs in healthcare are a concern. Although technological advancements have been made in healthcare systems, the return on investment made by governments and payers has been poor. The current model of care is unsustainable and is due for an upgrade. In developed nations, a law of diminishing returns has been noted in population health standards, whilst in the developing world, westernized chronic illnesses, such as diabetes and cardiovascular disease have become emerging problems. The reasons for these trends are complex, multifactorial and not easily reversed. Personalized medicine has the potential to have a significant impact on these issues, but for it to be truly successful, interdisciplinary mass collaboration is required. We propose here a vision for open-access advanced analytics for personalized cardiac diagnostics using imaging, electrocardiography and genomics.

  13. Research and Practice in K-12 Online Learning: A Review of Open Access Literature

    Directory of Open Access Journals (Sweden)

    Cathy S. Cavanaugh

    2009-02-01

    Full Text Available The literature related to online learning programs for K-12 students dates to the mid-1990s and builds upon a century of research and practice from K-12 distance education. While K-12 online learning programs have evolved and grown over the past decade, the amount of published research on virtual schooling practice and policy is limited. The current literature includes practitioner reports and experimental and quasi-experimental studies, both published and unpublished. This paper reviews open access literature in K-12 online learning and reports on a structured content analysis of the documents. Themes in the literature include steady growth and a focus on the benefits, challenges, and broad effectiveness of K-12 online learning. In addition, newly developed standards for K-12 online learning are emerging in descriptions of effective practices.

  14. The open access movement or “edemocracy”: its birth, rise, problems and solutions

    Directory of Open Access Journals (Sweden)

    Françoise Salager-Meyer

    2012-10-01

    Full Text Available We start with a definition of the open access (OA movement and the reason for its birth – that is, the 1980’s serials’ crisis. We then present and explain the two main OA roads (the Gold OA and the Green OA roads as well as the target of the OA movement. Key concepts related to the OA movement are also explained, such as “institutional repository”, “self-archiving”, “institutional mandate” and “directory of OA journals”. We also examine the rise and the benefits of the OA movement and give suggestions as to what universities, university students and researchers worldwide could do to promote the OA movement and make science truly accessible to all.

  15. Intangible Capital: Four years of growth as an open-access scientific publication

    Directory of Open Access Journals (Sweden)

    Pep Simo

    2008-01-01

    Full Text Available This issue opens the fourth volume of the Intangible Capital journal, which makes its way towards the fifth year of publication. As usually, we start this volume by evaluating the previous one and tracing new directions. Among the main contributions during the year 2007, we consider important to highlight the following aspects: the renewal of the scientific indexation agreements, the platform change to OJS, the appointment of a new editor, new members included in the editorial board, the board of reviewers, the change towards a bilingual model, the new financing obtained and, the last but not the least, the work undertaken together with many scientific editors of open access Spanish journals for obtaining the positive evaluation of the CNEAI (National Commission for the Evaluation of the Research Activity and thus, being a proof of scientific excellence.

  16. Memorandum "Open Metadata". Open Access to Documentation Forms and Item Catalogs in Healthcare.

    Science.gov (United States)

    Dugas, M; Jöckel, K-H; Friede, T; Gefeller, O; Kieser, M; Marschollek, M; Ammenwerth, E; Röhrig, R; Knaup-Gregori, P; Prokosch, H-U

    2015-01-01

    At present, most documentation forms and item catalogs in healthcare are not accessible to the public. This applies to assessment forms of routine patient care as well as case report forms (CRFs) of clinical and epidemiological studies. On behalf of the German chairs for Medical Informatics, Biometry and Epidemiology six recommendations to developers and users of documentation forms in healthcare were developed. Open access to medical documentation forms could substantially improve information systems in healthcare and medical research networks. Therefore these forms should be made available to the scientific community, their use should not be unduly restricted, they should be published in a sustainable way using international standards and sources of documentation forms should be referenced in scientific publications.

  17. Economies: An Open Access Journal for the Field of Development Macroeconomics

    Directory of Open Access Journals (Sweden)

    Ralf Fendel

    2013-01-01

    Full Text Available Economies (ISSN 2227-7099 is a new international, peer-reviewed open access journal for the academic fields of development economics and macroeconomics. While the latter seems to be clearly defined, development economics is not, because it is related to nearly all traditional economic sub-disciplines such as macroeconomics, international trade and finance, as well as microeconomics and public finance. Typically, academic field journals of development economics cover all those economic sub-disciplines. Economies instead focuses mainly on the macroeconomic perspective of economic development and it intends to publish academic research that is of strong macroeconomic policy relevance. In general, contributions in Economies should foster understanding of the macroeconomic process of economic development, with the process of development not exclusively being reserved to what we typically call developing countries. Also, the group of developed economies is still developing in the sense of improving their living standards further.

  18. Open Access Forever - Or Five Years, Whichever Comes First Progress on Preserving the Digital Scholarly Record

    CERN Document Server

    CERN. Geneva; Bjørnshauge, Lars

    2007-01-01

    As the migration of scholarly communication from print to digital continues to progress rapidly, and as Open Access to that research literature and related data becomes more common, the challenges of insuring that the scholarly record remain available over time becomes more urgent. There has been good progress on those challenges in recent years, but many problems remain. The current state of the curation and preservation of digital scholarship over its entire lifecycle will be reviewed, and progress on problems of specific interest to scholarly communication will be examined. The difficulty of curating the digital scholarly record and preserving it for future generations has important implications for the movement to make that record more open and accessible to the world, so this a timely topic for those who are interested in the future of scholarly communication.

  19. History and structures of telecommunication in pathology, focusing on open access platforms

    Directory of Open Access Journals (Sweden)

    Kayser Klaus

    2011-11-01

    Full Text Available Abstract Background Telecommunication has matured to a broadly applied tool in diagnostic pathology. Technology and Systems Contemporary with the development of fast electronic communication lines (Integrated digital network services (ISDN, broad band connections, and fibre optics, as well as the digital imaging technology (digital camera, telecommunication in tissue - based diagnosis (telepathology has matured. Open access (internet and server - based communication have induced the development of specific medical information platforms, such as iPATH, UICC-TPCC (telepathology consultation centre of the Union International against Cancer, or the Armed Forces Institute of Pathology (AFIP teleconsultation system. They have been closed, and are subject to be replaced by specific open access forums (Medical Electronic Expert Communication System (MECES with embedded virtual slide (VS technology. MECES uses php language, data base driven mySqL architecture, X/L-AMPP infrastructure, and browser friendly W3C conform standards. Experiences The server - based medical communication systems (AFIP, iPATH, UICC-TPCC have been reported to be a useful and easy to handle tool for expert consultation. Correct sampling and evaluation of transmitted still images by experts reported revealed no or only minor differences to the original images and good practice of the involved experts. β tests with the new generation medical expert consultation systems (MECES revealed superior results in terms of performance, still image viewing, and system handling, especially as this is closely related to the use of so - called social forums (facebook, youtube, etc.. Benefits and Expectations In addition to the acknowledged advantages of the former established systems (assistance of pathologists working in developing countries, diagnosis confirmation, international information exchange, etc., the new generation offers additional benefits such as acoustic information transfer

  20. History and structures of telecommunication in pathology, focusing on open access platforms.

    Science.gov (United States)

    Kayser, Klaus; Borkenfeld, Stephan; Djenouni, Amina; Kayser, Gian

    2011-11-07

    Telecommunication has matured to a broadly applied tool in diagnostic pathology. Contemporary with the development of fast electronic communication lines (Integrated digital network services (ISDN), broad band connections, and fibre optics, as well as the digital imaging technology (digital camera), telecommunication in tissue--based diagnosis (telepathology) has matured. Open access (internet) and server--based communication have induced the development of specific medical information platforms, such as iPATH, UICC-TPCC (telepathology consultation centre of the Union International against Cancer), or the Armed Forces Institute of Pathology (AFIP) teleconsultation system. They have been closed, and are subject to be replaced by specific open access forums (Medical Electronic Expert Communication System (MECES) with embedded virtual slide (VS) technology). MECES uses php language, data base driven mySqL architecture, X/L-AMPP infrastructure, and browser friendly W3C conform standards. The server--based medical communication systems (AFIP, iPATH, UICC-TPCC) have been reported to be a useful and easy to handle tool for expert consultation. Correct sampling and evaluation of transmitted still images by experts reported revealed no or only minor differences to the original images and good practice of the involved experts. β tests with the new generation medical expert consultation systems (MECES) revealed superior results in terms of performance, still image viewing, and system handling, especially as this is closely related to the use of so--called social forums (facebook, youtube, etc.). In addition to the acknowledged advantages of the former established systems (assistance of pathologists working in developing countries, diagnosis confirmation, international information exchange, etc.), the new generation offers additional benefits such as acoustic information transfer, assistance in image screening, VS technology, and teaching in diagnostic sampling, judgement

  1. The development of open access journal publishing from 1993 to 2009.

    Science.gov (United States)

    Laakso, Mikael; Welling, Patrik; Bukvova, Helena; Nyman, Linus; Björk, Bo-Christer; Hedlund, Turid

    2011-01-01

    Open Access (OA) is a model for publishing scholarly peer reviewed journals, made possible by the Internet. The full text of OA journals and articles can be freely read, as the publishing is funded through means other than subscriptions. Empirical research concerning the quantitative development of OA publishing has so far consisted of scattered individual studies providing brief snapshots, using varying methods and data sources. This study adopts a systematic method for studying the development of OA journals from their beginnings in the early 1990s until 2009. Because no comprehensive index of OA articles exists, systematic manual data collection from journal web sites was conducted based on journal-level data extracted from the Directory of Open Access Journals (DOAJ). Due to the high number of journals registered in the DOAJ, almost 5000 at the time of the study, stratified random sampling was used. A separate sample of verified early pioneer OA journals was also studied. The results show a very rapid growth of OA publishing during the period 1993-2009. During the last year an estimated 191 000 articles were published in 4769 journals. Since the year 2000, the average annual growth rate has been 18% for the number of journals and 30% for the number of articles. This can be contrasted to the reported 3,5% yearly volume increase in journal publishing in general. In 2009 the share of articles in OA journals, of all peer reviewed journal articles, reached 7,7%. Overall, the results document a rapid growth in OA journal publishing over the last fifteen years. Based on the sampling results and qualitative data a division into three distinct periods is suggested: The Pioneering years (1993-1999), the Innovation years (2000-2004), and the Consolidation years (2005-2009).

  2. The Development of Open Access Journal Publishing from 1993 to 2009

    Science.gov (United States)

    Laakso, Mikael; Welling, Patrik; Bukvova, Helena; Nyman, Linus; Björk, Bo-Christer; Hedlund, Turid

    2011-01-01

    Open Access (OA) is a model for publishing scholarly peer reviewed journals, made possible by the Internet. The full text of OA journals and articles can be freely read, as the publishing is funded through means other than subscriptions. Empirical research concerning the quantitative development of OA publishing has so far consisted of scattered individual studies providing brief snapshots, using varying methods and data sources. This study adopts a systematic method for studying the development of OA journals from their beginnings in the early 1990s until 2009. Because no comprehensive index of OA articles exists, systematic manual data collection from journal web sites was conducted based on journal-level data extracted from the Directory of Open Access Journals (DOAJ). Due to the high number of journals registered in the DOAJ, almost 5000 at the time of the study, stratified random sampling was used. A separate sample of verified early pioneer OA journals was also studied. The results show a very rapid growth of OA publishing during the period 1993–2009. During the last year an estimated 191 000 articles were published in 4769 journals. Since the year 2000, the average annual growth rate has been 18% for the number of journals and 30% for the number of articles. This can be contrasted to the reported 3,5% yearly volume increase in journal publishing in general. In 2009 the share of articles in OA journals, of all peer reviewed journal articles, reached 7,7%. Overall, the results document a rapid growth in OA journal publishing over the last fifteen years. Based on the sampling results and qualitative data a division into three distinct periods is suggested: The Pioneering years (1993–1999), the Innovation years (2000–2004), and the Consolidation years (2005–2009). PMID:21695139

  3. Exploring Determinants of Housing Prices in Beijing: An Enhanced Hedonic Regression with Open Access POI Data

    Directory of Open Access Journals (Sweden)

    Yixiong Xiao

    2017-11-01

    Full Text Available The housing market in Chinese metropolises have become inflated significantly over the last decade. In addition to an economic upturn and housing policies that have potentially fueled the real estate bubble, factors that have contributed to the spatial heterogeneity of housing prices can be dictated by the amenity value in the proximity of communities, such as accessibility to business centers and transportation hubs. In the past, scholars have employed the hedonic pricing model to quantify the amenity value in relation to structural, locational, and environmental variables. These studies, however, are limited by two methodological obstacles that are relatively difficult to overcome. The first pertains to difficulty of data collection in regions where geospatial datasets are strictly controlled and limited. The second refers to the spatial autocorrelation effect inherent in the hedonic analysis. Using Beijing, China as a case study, we addressed these two issues by (1 collecting residential housing and urban amenity data in terms of Points of Interest (POIs through web-crawling on open access platforms; and (2 eliminating the spatial autocorrelation effect using the Eigenvector Spatial Filtering (ESF method. The results showed that the effects of nearby amenities on housing prices are mixed. In other words, while proximity to certain amenities, such as convenient parking, was positively correlated with housing prices, other amenity variables, such as supermarkets, showed negative correlations. This mixed finding is further discussed in relation to community planning strategies in Beijing. This paper provides an example of employing open access datasets to analyze the determinants of housing prices. Results derived from the model can offer insights into the reasons for housing segmentation in Chinese cities, eventually helping to formulate effective urban planning strategies and equitable housing policies.

  4. Open-Access Physical Activity Programs for Older Adults: A Pragmatic and Systematic Review.

    Science.gov (United States)

    Balis, Laura E; Strayer, Thomas; Ramalingam, NithyaPriya; Wilson, Meghan; Harden, Samantha M

    2018-01-10

    Open-access, community-based programs are recommended to assist older adults in meeting physical activity guidelines, but the characteristics, impact, and scalability of these programs is less understood. The Land-Grant University Cooperative Extension System, an organization providing education through county-based educators, functions as a delivery system for these programs. A systematic review was conducted to determine characteristics of effective older adult physical activity programs and the extent to which programs delivered in Extension employ these characteristics. A systematic review of peer-reviewed and grey literature was conducted from August 2016 to February 2017. The review was limited to open-access (available to all), community-based physical activity interventions for older adults (≥65 years of age). The peer-reviewed literature search was conducted in PubMed and EBSCOhost; the grey literature search for Extension interventions was conducted through Extension websites, Land-Grant Impacts, and the Journal of Extension. Sixteen peer-reviewed studies and 17 grey literature sources met inclusion criteria and were analyzed. Peer-reviewed and Extension programs were similar in their limited use of behavioral theories and group-based strategies. Compared to Extension programs, those in the peer-reviewed literature were more likely to use a combination of physical activity components and be delivered by trained professionals. The results indicate notable differences between peer-reviewed literature and Extension programs and present an opportunity for Extension programs to more effectively use evidence-based program characteristics, including behavioral theories and group dynamics, a combination of physical activity components, and educator/agent-trained delivery agents.

  5. Open access colonoscopy: Critical appraisal of indications, quality metrics and outcomes.

    Science.gov (United States)

    Ghaoui, Rony; Ramdass, Sheryl; Friderici, Jennifer; Desilets, David J

    2016-08-01

    In an era of cost containment and measurement of value, screening for colon cancer represents a clear target for better accountability. Bundling payment is a real possibility and will likely have to rely on open-access colonoscopy (OAC). OAC is a method to allow patients to undergo endoscopy without prior evaluation by a gastroenterologist. We conducted a cross-sectional study to evaluate the indications and outcomes among patients scheduled for OAC or traditional colonoscopy at a tertiary medical center. We hypothesized that outcomes in OAC patients would be similar to those from traditional referral modes. Using a standardized data abstraction form, we documented indications for colonoscopy, clinical outcomes (complications, emergency room visits, phone calls), and compliance with quality indicators (QI) in a random sample of 1000 patients who underwent an outpatient colonoscopy at an academic medical center in 2013. We compared baseline characteristics and outcomes between two cohorts: OAC vs. patients who were scheduled after previous evaluation by a gastroenterologist or physician assistant or non-open access colonoscopy (NOAC). Patients in the OAC group were more likely to be male, non-Hispanic, to be privately insured, and to have screening (vs. diagnostic) indication. However they were significantly less likely than those in the NOAC group to have a procedure performed once scheduled, (45.5% vs. 66.9%, pmetrics such as documentation of prep quality (99.8% vs. 98.8%, p=0.24). Patients undergoing OAC are more likely to have a screening colonoscopy but with overall similar clinical outcomes and compliance with QI to patients scheduled as NOAC. OAC remains handicapped by high cancellation and no-show rates. Copyright © 2016 Editrice Gastroenterologica Italiana S.r.l. Published by Elsevier Ltd. All rights reserved.

  6. Open access phone triage for veterans with suspected malignant pleural mesothelioma.

    Science.gov (United States)

    Siegert, Charles Jeff; Fisichella, Piero Marco; Moseley, Jennifer M; Shoni, Melina; Lebenthal, Abraham

    2017-01-01

    Phone triaging patients with suspected malignant pleural mesothelioma (MPM) within the Veterans Healthcare Administration (VHA) system offers a model for rapid, expert guided evaluation for patients with rare and treatable diseases within a national integrated healthcare system. To assess feasibility of national open access telephone triage using evidence-based treatment recommendations for patients with MPM, measure timelines of the triage and referral process and record the impact on "intent to treat" for patients using our service. A retrospective study. The main outcome measures were: (1) ability to perform long distance phone triage, (2) to assess the speed of access to a mesothelioma surgical specialist for patients throughout the entire VHA, and (3) to determine if access to a specialist would alter the plan of care. Sixty veterans were screened by our phone triage program, 38 traveled an average of 997 miles to VA Boston Healthcare system. On average, 14 d elapsed from initial phone contact until the patient was physically evaluated in our general thoracic clinic in Boston. The treatment plan was altered for 71% of patients evaluated at VA Boston Healthcare system based on 2012 International Mesothelioma Interest Group guidelines. Our initial experience demonstrates that in-network centralized care for Veterans with MPM is feasible within the VHA. National open access phone triage improves access to expert surgical advice and can be delivered in a timely manner for Veterans using our service. Guideline-based treatment recommendations ("intent to treat") changed the therapeutic course for the majority of patients who used our service. Copyright © 2016 Elsevier Inc. All rights reserved.

  7. Editors View the Continuous Publication Model as a Satisfactory Alternative for Open Access LIS Journals

    Directory of Open Access Journals (Sweden)

    Richard Hayman

    2014-09-01

    Full Text Available A Review of: Cirasella, J., & Bowdoin, S. (2013. Just roll with it? Rolling volumes vs. discrete issues in open access library and information science journals. Journal of Librarianship and Scholarly Communication, 1(4. http://dx.doi.org/10.7710/2162-3309.1086 Abstract Objective – To understand the prevalence of, motivations for, and satisfaction with using a rolling-volume publishing model, as opposed to publishing discrete issues, across open access academic journals in library and information science. Design – A 12 question survey questionnaire. Setting – English-language, open access library and information science (LIS journals published in the United States of America. Subjects – A total of 21 open access LIS journals identified via the Directory of Open Access Journals that were actively publishing, and that also met the authors’ standard of scholarliness, which they established by identifying a journal’s peer-review process or other evidence of rigorous review. Based on responses, 12 journals published using discrete issues, while 9 published as rolling volumes or as rolling volumes with some discrete issues. Methods – In late 2011, the study’s authors invited lead editors or primary journal contacts to complete the survey. Survey participants were asked to identify whether their journal published in discrete issues, rolling volumes, or rolling volumes with occasional discrete issues, with the latter two categories combined as one for ease of results analysis. Survey logic split respondents into two groups, either discrete-issue or rolling-volume. Respondents in both categories were posed similar sets of questions, with the key difference being that the questions directed at each category accounted for the publication model the journals themselves identified as using. Editors from both groups were asked about the reasons for using the publication model they identified for their journal: within the survey tool, authors

  8. JASPAR, the open access database of transcription factor-binding profiles: new content and tools in the 2008 update

    National Research Council Canada - National Science Library

    Bryne, Jan Christian; Valen, Eivind; Tang, Man-Hung Eric; Marstrand, Troels; Winther, Ole; da Piedade, Isabelle; Krogh, Anders; Lenhard, Boris; Sandelin, Albin

    .... New functions include clustering of matrix models by similarity, generation of random matrices by sampling from selected sets of existing models and a language-independent Web Service applications...

  9. Glia Open Access Database (GOAD) : A comprehensive gene expression encyclopedia of glia cells in health and disease

    NARCIS (Netherlands)

    Kim N. Duong; Hendrikus W.G.M. Boddeke; Marije A. van der Geest; Peer T. Ketelaars; Marieke Bijlsma; Nieske Brouwer; Inge R. Holtman; Michiel Noback; Ilia D. Vainchtein; Bart J.L. Eggen

    2015-01-01

    Recently, the number of genome-wide transcriptome profiles of pure populations of glia cells has drastically increased, resulting in an unprecedented amount of data that offer opportunities to study glia phenotypes and functions in health and disease. To make genome-wide transcriptome data easily

  10. The Long-Run Impact on Population and Income of Open Access to Land in a Model with Parental Altruism

    OpenAIRE

    Jon D. Harford

    2000-01-01

    Steady state levels of population and per capita income are examined using a Becker-Barro (1988) style of model of an economy with identical altruistic parents bearing costly children who receive bequests of capital and land. Inspired by the work of North (1981) and others, the problem of open access land with ancillary negative effects on private (but not public) productivity of capital is examined. It is seen that open access to land can lead to overpopulation in a ceteris paribus sense, an...

  11. Regulation of natural gas: the issue of open access; Regulacao em materia de gas natural: a questao do livre acesso

    Energy Technology Data Exchange (ETDEWEB)

    Sandes, Ingrid; Siqueira, Mariana [Universidade Federal do Rio Grande do Norte (UFRN), Natal, RN (Brazil). Faculdade de Direito

    2004-07-01

    The present work discusses the question of the open access to the natural gas ducts, trying to show the most relevant aspects of it. Analyzing the regulation existent in Brazil and the main important characteristics of the natural gas activities, it will be tried to suggest new directions to be taken in the future. The open access it is a very important way to introduce new agents on the sector and, in that way, the discussions that try to show new aspects of it, are very relevant (author)

  12. The COMPADRE Plant Matrix Database

    DEFF Research Database (Denmark)

    2014-01-01

    COMPADRE contains demographic information on hundreds of plant species. The data in COMPADRE are in the form of matrix population models and our goal is to make these publicly available to facilitate their use for research and teaching purposes. COMPADRE is an open-access database. We only request...

  13. Open access publishing: a study of current practices in orthopaedic research.

    Science.gov (United States)

    Sabharwal, Sanjeeve; Patel, Nirav; Johal, Karanjeev

    2014-06-01

    Open access (OA) publications have changed the paradigm of dissemination of scientific research. Their benefits to low-income countries underline their value; however, critics question exorbitant publication fees as well as their effect on the peer review process and research quality. This study reports on the prevalence of OA publishing in orthopaedic research and compares benchmark citation indices as well as evidence quality derived from OA journals with conventional subscription based orthopaedic journals. All 63 orthopaedic journals listed in ISI's Web of Knowledge Journal Citation Report (JCR) were examined. Bibliometric data attributed to each journal for the year 2012 was acquired from the JCR. Studies that fulfilled the criteria of level I evidence were identified for each journal within PubMed. Individual journal websites were reviewed to identify their open access policy. A total of 38 (60.3 %) journals did not offer any form of OA publishing; however, 20 (31.7 %) hybrid journals were identified which offered authors the choice to publish their work as OA if a publication fee was paid. Only five (8 %) journals published all their articles as OA. There was variability amongst the different publication fees for OA articles. Journals that published OA articles did not differ from subscription based journals on the basis of 2012 impact factor, citation number, self citation proportion or the volume of level I evidence published (p > 0.05). OA journals are present in orthopaedic research, though in small numbers. Over a third of orthopaedic journals catalogued in the ISI Web of Knowledge JCR® are hybrid journals that provide authors with the opportunity to publish their articles as OA after a publication fee is paid. This study suggests equivalent importance and quality of articles between OA and subscription based orthopaedic journals based on bibliometric data and the volume of level I evidence produced. Orthopaedic researchers must recognize the

  14. Rolling Deck to Repository (R2R): Standards and Semantics for Open Access to Research Data

    Science.gov (United States)

    Arko, Robert; Carbotte, Suzanne; Chandler, Cynthia; Smith, Shawn; Stocks, Karen

    2015-04-01

    In recent years, a growing number of funding agencies and professional societies have issued policies calling for open access to research data. The Rolling Deck to Repository (R2R) program is working to ensure open access to the environmental sensor data routinely acquired by the U.S. academic research fleet. Currently 25 vessels deliver 7 terabytes of data to R2R each year, acquired from a suite of geophysical, oceanographic, meteorological, and navigational sensors on over 400 cruises worldwide. R2R is working to ensure these data are preserved in trusted repositories, discoverable via standard protocols, and adequately documented for reuse. R2R maintains a master catalog of cruises for the U.S. academic research fleet, currently holding essential documentation for over 3,800 expeditions including vessel and cruise identifiers, start/end dates and ports, project titles and funding awards, science parties, dataset inventories with instrument types and file formats, data quality assessments, and links to related content at other repositories. A Digital Object Identifier (DOI) is published for 1) each cruise, 2) each original field sensor dataset, 3) each post-field data product such as quality-controlled shiptrack navigation produced by the R2R program, and 4) each document such as a cruise report submitted by the science party. Scientists are linked to personal identifiers, such as the Open Researcher and Contributor ID (ORCID), where known. Using standard global identifiers such as DOIs and ORCIDs facilitates linking with journal publications and generation of citation metrics. Since its inception, the R2R program has worked in close collaboration with other data repositories in the development of shared semantics for oceanographic research. The R2R cruise catalog uses community-standard terms and definitions hosted by the NERC Vocabulary Server, and publishes ISO metadata records for each cruise that use community-standard profiles developed with the NOAA Data

  15. Landscapes of Research: Perceptions of Open Access (OA Publishing in the Arts and Humanities

    Directory of Open Access Journals (Sweden)

    Julia Gross

    2015-04-01

    Full Text Available It is widely known now that scholarly communication is in crisis, resting on an academic publishing model that is unsustainable. One response to this crisis has been the emergence of Open Access (OA publishing, bringing scholarly literature out from behind a paywall and making it freely available to anyone online. Many research and academic libraries are facilitating the change to OA by establishing institutional repositories, supporting OA policies, and hosting OA journals. In addition, research funding bodies, such as the Australian Research Council (ARC, are mandating that all published grant research outputs be made available in OA, unless legal and contractual obligations prevent this. Despite these broader changes, not all scholars are aware of the new publishing environment. In particular, the rate of adoption of OA models in the Humanities and Social Sciences (HSS has historically been lower than Science, Technology and Medicine (STM disciplines. Nevertheless, some local and international OA exemplars exist in HSS. At Edith Cowan University in Perth, Western Australia, the faculty-administered environmental humanities journal, Landscapes, was migrated to the institutional open access repository in 2013. Subsequently, researchers in the Faculty of Education and Arts were surveyed regarding their knowledge, understandings, and perceptions of OA publishing. The survey was also designed to elicit the barriers to OA publishing perceived or experienced by HSS researchers. This article will present the findings of our small faculty-based OA survey, with particular attention to HSS academics (and within this subject group, particular attention to the arts and humanities, their perceptions of OA, and the impediments they encounter. We argue that OA publishing will continue to transform scholarship within the arts and humanities, especially through the role of institutional repositories. The “library-as-publisher” role offers the potential to

  16. Diamond open access and open peer review : An analysis of the role of copyright and librarians in the support of a shift towards open access in the legal domain.

    NARCIS (Netherlands)

    Hoorn, Esther

    2014-01-01

    The aim of this paper is to support initiatives that stimulate volunteer involvement in creating qualitatively good conversations about the law on the internet. The article’s core argument is that policies on open access, copyright and library services all concentrate nowon the results of scholarly

  17. Access to global health research. Prevalence and cost of gold and hybrid open access

    Energy Technology Data Exchange (ETDEWEB)

    Haustein, S.; Smith, E.; Mongeon, P.; Shu, F.; Lariviere, V.

    2016-07-01

    As it is a priority of global health research (GHR) to achieve equity in health worldwide, there is an increased demand and expectation that knowledge be shared freely and without barriers. Making research findings available for free to readers by publishing open access (OA) is thus central to GHR. Several studies have assessed the extent to which different forms of OA prevail but despite the importance of free access to knowledge in GHR, particular empirical evidence is missing. This paper aims to fill this gap by analyzing the extent to which GHR papers indexed in PubMed are published OA and how much it costs to publish in gold and hybrid OA journals. Findings show that between 2010 and 2014 as few as 18% of papers were published in gold OA journals, 7% published as hybrid OA (i.e., OA papers in subscription journals), while more than 60% were behind paywalls. Costs for gold OA amounted to $990,619 for 404 papers, whereas $722,631 were spent on article processing charges (APCs) of 223 hybrid papers. The majority of APCs were obtained by large commercial publishing houses known for exorbitant profit margins. (Author)

  18. Open access: academic publishing and its implications for knowledge equity in Kenya.

    Science.gov (United States)

    Matheka, Duncan Mwangangi; Nderitu, Joseph; Mutonga, Daniel; Otiti, Mary Iwaret; Siegel, Karen; Demaio, Alessandro Rhyll

    2014-04-09

    Traditional, subscription-based scientific publishing has its limitations: often, articles are inaccessible to the majority of researchers in low- and middle-income countries (LMICs), where journal subscriptions or one-time access fees are cost-prohibitive. Open access (OA) publishing, in which journals provide online access to articles free of charge, breaks this barrier and allows unrestricted access to scientific and scholarly information to researchers all over the globe. At the same time, one major limitation to OA is a high publishing cost that is placed on authors. Following recent developments to OA publishing policies in the UK and even LMICs, this article highlights the current status and future challenges of OA in Africa. We place particular emphasis on Kenya, where multidisciplinary efforts to improve access have been established. We note that these efforts in Kenya can be further strengthened and potentially replicated in other African countries, with the goal of elevating the visibility of African research and improving access for African researchers to global research, and, ultimately, bring social and economic benefits to the region. We (1) offer recommendations for overcoming the challenges of implementing OA in Africa and (2) call for urgent action by African governments to follow the suit of high-income countries like the UK and Australia, mandating OA for publicly-funded research in their region and supporting future research into how OA might bring social and economic benefits to Africa.

  19. Trends in Research and Publication: Science 2.0 and Open Access

    Directory of Open Access Journals (Sweden)

    Geir Hovland

    2009-07-01

    Full Text Available This paper considers current trends in academic research and publication, in particular as seen from the control community. The introduction of Web 2.0 applications for scientists and engineers is currently changing the way research is being conducted. In the near future, participants in the research community will be able to share ideas, data and results like never before. They will also be able to manage the rapidly increasing amount of scientific information much more effectively than today through collaborative efforts enabled by the new Internet tools. However, an important premise for such a development is the availability of research material. Many research results are currently shielded behind expensive subscription schemes that impede the sharing of information. At the same time, an increasing amount of research is being published through open access channels with unrestricted availability. Interestingly, recent studies show that such policies contribute to an increased number of citations compared to the pay-based alternatives. In sum, the parallel development of new tools for research collaboration and an increased access to research material may fundamentally transform the way research is going to be conducted in the future.

  20. A longitudinal study of independent scholar-published open access journals

    Directory of Open Access Journals (Sweden)

    Bo-Christer Björk

    2016-05-01

    Full Text Available Open Access (OA is nowadays increasingly being used as a business model for the publishing of scholarly peer reviewed journals, both by specialized OA publishing companies and major, predominantly subscription-based publishers. However, in the early days of the web OA journals were mainly founded by independent academics, who were dissatisfied with the predominant print and subscription paradigm and wanted to test the opportunities offered by the new medium. There is still an on-going debate about how OA journals should be operated, and the volunteer model used by many such ‘indie’ journals has been proposed as a viable alternative to the model adopted by big professional publishers where publishing activities are funded by authors paying expensive article processing charges (APCs. Our longitudinal quantitative study of 250 ‘indie’ OA journals founded prior to 2002, showed that 51% of these journals were still in operation in 2014 and that the median number of articles published per year had risen from 11 to 18 among the survivors. Of these surviving journals, only 8% had started collecting APCs. A more detailed qualitative case study of five such journals provided insights into how such journals have tried to ensure the continuity and longevity of operations.

  1. A comparison of subscription and open access journals in construction management and related fields

    Directory of Open Access Journals (Sweden)

    Bo-Christer Bjork

    2012-05-01

    Full Text Available The Internet has profoundly changed the technical infrastructure for the publishing of scientific peer reviewed journals. The traditional business model of selling the content to subscribers is increasingly being challenged by Open Access journals, which are either run at low cost by voluntary academics or which sell dissemination services to authors. In addition authors in many fields are taking advantage of the legal possibilities of uploading free manuscript versions to institutional or subject-based repositories, in order to increase readership and impact. Construction Management is lagging behind many other fields in utilising the potential of the web for efficient dissemination results, in particular to academics outside the leading universities in industrialised countries. This study looks closer at the current publishing situation in construction management and related fields and compares empirical data about 16 OA journals and 16 traditional subscription journals. Of the articles published in 2011 in the subscription journals only 9 % could be found as OA copies. The overall OA availability (including article in OA journals was 14 % for Construction Management and Economics and 29 for construction IT scholarship.

  2. Numeracy: Open-Access Publishing to Reduce the Cost of Scholarly Journals

    Directory of Open Access Journals (Sweden)

    Todd Chavez

    2010-01-01

    Full Text Available Each fiscal year, as academic librarians throughout the United States prepare materials budgets, a national “groan” ensues. Regardless of their format (i.e. print or digital, serial subscription costs are escalating, in the process impacting the role of the library in advancing scholarly communication . This paper examines some of the economic issues concerning open-access (OA journal publishing. The importance of quantitative literacy is suggested for librarians and academics seeking a better understanding of alternatives to traditional journal subscription models and to anyone considering ventures into OA publishing. Quantitative literacy is essential for managing alternatives to the rising cost of scholarly communication.The OA movement is gaining traction at the national level, following mandates from the National Institutes of Health and at some large research universities that host institutional repositories. Science faculty has been engaged in scholarly communication OA models since the 1970s. More broadly, discussions in academe have focused on OA and its impact on peer review, promotion and tenure, intellectual property rights, and measures of institutional and faculty productivity. Studies concerning the OA movement’s economics are most commonly reported in academic librarianship literature, a trend that may serve as a barrier to a broader understanding of OA’s role in scholarly communication. This paper provides background information on the crisis in serials costs and suggests that metrics favor OA models publishing models. A concluding proposal concerning library-funded OA serial collections is offered as a catalyst for further discussions.

  3. A comparison of subscription and open access journals in construction management and related fields

    Directory of Open Access Journals (Sweden)

    Bo-Christer Bjork

    2012-05-01

    Full Text Available The Internet has profoundly changed the technical infrastructure for the publishing of scientific peer reviewed journals. The traditional business model of selling the content to subscribers is increasingly being challenged by Open Access journals, which are either run at low cost by voluntary academics or which sell dissemination services to authors. In addition authors in many fields are taking advantage of the legal possibilities of uploading free manuscript versions to institutional or subject-based repositories, in order to increase readership and impact. Construction Management is lagging behind many other fields in utilising the potential of the web for efficient dissemination results, in particular to academics outside the leading universities in industrialised countries. This study looks closer at the current publishing situation in construction management and related fields and compares empirical data about 16 OA journals and 16 traditional subscription journals. Of the articles published in 2011 in the subscription journals only 9 % could be found as OA copies. The overall OA availability (including article in OA journals was 14 % for Construction Management and Economics and 29 for construction IT scholarship. 

  4. Open Access publishing – another important step forward for SCOAP3

    CERN Multimedia

    CERN Bulletin

    2011-01-01

    Over recent years CERN has led an initiative, known as SCOAP3, to convert high-quality journals in the field of high-energy physics to Open Access. This will eventually allow anyone, anywhere, anytime, to access peer-reviewed results of research in our field, and will offer more opportunity for the re-use of scientific information. As a pilot, the CERN Scientific Information Service has been establishing partnerships with leading publishers in the field since late 2009 to offer similar conditions to the LHC collaborations.   SCOAP3 is a large consensus-building financial operation, with a projected yearly budget envelope of 10 million euros. To date, SCOAP3 counts partners in 27 countries around the world, who have pledged about three quarters of these funds. On 6 April, representatives of the institutions participating in the SCOAP3 consortium met at CERN to assess the progress of the initiative. During the meeting, large publishers in the field – APS, Elsevier, IOPp, SISSA and Springer &...

  5. Switched-based interference reduction scheme for open-access overlaid cellular networks

    KAUST Repository

    Radaydeh, Redha Mahmoud Mesleh

    2012-06-01

    Femtocells have been proposed to enhance the spatial coverage and system capacity of existing cellular networks. However, this technology may result in significant performance loss due to the increase in co-channel interference, particularly when coordination between access points is infeasible. This paper targets interference management in such overlaid networks. It is assumed that the femtocells employ the open-access strategy to reduce cross-tier interference, and can share resources concurrently. It is also assumed that each end user (EU) can access one channel at a time, and transfer limited feedback. To reduce the effect of co-tier interference in the absence of the desired EU channel state information (CSI) at the serving access point as well as coordination between active access points, a switched scheme based on the interference levels associated with available channels is proposed. Through the analysis, the scheme modes of operation in under-loaded and over-loaded channels are studied, from which the statistics of the resulting interference power are quantified. The impact of the proposed scheme on the received desired power is thoroughly discussed. In addition, the effect of the switching threshold on the achieved performance of the desired EU is investigated. The results clarify that the proposed scheme can improve the performance while reducing the number of examined channels and feedback load. © 2012 IEEE.

  6. Low-complexity co-tier interference reduction scheme in open-access overlaid cellular networks

    KAUST Repository

    Radaydeh, Redha Mahmoud Mesleh

    2011-12-01

    This paper addresses the effect of co-tier interference on the performance of multiuser overlaid cellular networks that share the same available resources. It assumed that each macrocell contains a number of self-configurable and randomly located femtocells that employ the open-access control strategy to reduce the effect of cross-tier interference. It is also assumed that the desired user equipment (UE) can access only one of the available channels, maintains simple decoding circuitry with single receive antenna, and has limited knowledge of the instantaneous channel state information (CSI) due to resource limitation. To mitigate the effect of co-tier interference in the absence of the CSI of the desired UE, a low-complexity switched-based scheme for single channel selection based on the predicted interference levels associated with available channels is proposed for the case of over-loaded channels. Through the analysis, new general formulation for the statistics of the resulting instantaneous interference power and some performance measures are presented. The effect of the switching threshold on the efficiency and performance of the proposed scheme is studied. Numerical and simulation results to clarify the usefulness of the proposed scheme in reducing the impact of co-tier interference are also provided. © 2011 IEEE.

  7. TTLEM: Open access tool for building numerically accurate landscape evolution models in MATLAB

    Science.gov (United States)

    Campforts, Benjamin; Schwanghart, Wolfgang; Govers, Gerard

    2017-04-01

    Despite a growing interest in LEMs, accuracy assessment of the numerical methods they are based on has received little attention. Here, we present TTLEM which is an open access landscape evolution package designed to develop and test your own scenarios and hypothesises. TTLEM uses a higher order flux-limiting finite-volume method to simulate river incision and tectonic displacement. We show that this scheme significantly influences the evolution of simulated landscapes and the spatial and temporal variability of erosion rates. Moreover, it allows the simulation of lateral tectonic displacement on a fixed grid. Through the use of a simple GUI the software produces visible output of evolving landscapes through model run time. In this contribution, we illustrate numerical landscape evolution through a set of movies spanning different spatial and temporal scales. We focus on the erosional domain and use both spatially constant and variable input values for uplift, lateral tectonic shortening, erodibility and precipitation. Moreover, we illustrate the relevance of a stochastic approach for realistic hillslope response modelling. TTLEM is a fully open source software package, written in MATLAB and based on the TopoToolbox platform (topotoolbox.wordpress.com). Installation instructions can be found on this website and the therefore designed GitHub repository.

  8. Do Croatian open access journals support ethical research? Content analysis of instructions to authors.

    Science.gov (United States)

    Stojanovski, Jadranka

    2015-01-01

    The aim of our study was to investigate the extent to which Instructions to authors of the Croatian open access (OA) journals are addressing ethical issues. Do biomedical journals differ from the journals from other disciplines in that respect? Our hypothesis was that biomedical journals maintain much higher publication ethics standards. This study looked at 197 Croatian OA journals Instructions to authors to address the following groups of ethical issues: general terms; guidelines and recommendations; research approval and registration; funding and conflict of interest; peer review; redundant publications, misconduct and retraction; copyright; timeliness; authorship; and data accessibility. We further compared a subset of 159 non-biomedical journals with a subset of 38 biomedical journals. Content analysis was used to discern the ethical issues representation in the instructions to authors. The groups of biomedical and non-biomedical journals were similar in terms of originality (χ2=2.183, P=0.140), peer review process (χ2=0.296, P=0.586), patent/grant statement (χ2=2.184, P=0.141), and timeliness of publication (χ2=0.369, P=0.544). We identified significant differences among categories including ethical issues typical for the field of biomedicine, like patients (χ2=47.111, PBiomedical journals also rely on international editorial guidelines formulated by relevant professional organizations heavily, compared with non-biomedical journals (χ2=42.666, Pjournals.

  9. Providing Open-Access Know How for Directors of Quantitative and Mathematics Support Centers

    Directory of Open Access Journals (Sweden)

    Michael Schuckers

    2017-01-01

    Full Text Available The purpose of this editorial is to introduce the quantitative literacy community to the newly published A Handbook for Directors of Quantitative and Mathematics Centers. QMaSCs (pronounced “Q-masks” can be broadly defined as centers that have supporting students in quantitative fields of study as part of their mission. Some focus only on calculus or mathematics; others concentrate on numeracy or quantitative literacy, and some do all of that. A QMaSC may be embedded in a mathematics department, or part of a learning commons, or a stand-alone center. There are hundreds of these centers in the U.S. The new handbook, which is the outgrowth of a 2013 NSF-sponsored, national workshop attended by 23 QMaSC directors from all quarters of the U.S., is available open access on the USF Scholar Commons and in hard copy from Amazon.com. This editorial by the handbook’s editors provides background and overview of the 20 detailed chapters on center leadership and management; community interactions; staffing, hiring and training; center assessment; and starting a center; and then a collection of ten case studies from research universities, four-year state colleges, liberal arts colleges, and a community college. The editorial ends by pointing out the need and potential benefits of a professional organization for QMaSC directors.

  10. Open Access in Context: Connecting Authors, Publications and Workflows Using ORCID Identifiers

    Directory of Open Access Journals (Sweden)

    Josh Brown

    2016-09-01

    Full Text Available As scholarly communications became digital, Open Access and, more broadly, open research, emerged among the most exciting possibilities of the academic Web. However, these possibilities have been constrained by phenomena carried over from the print age. Information resources dwell in discrete silos. It is difficult to connect authors and others unambiguously to specific outputs, despite advances in algorithmic matching. Connecting funding information, datasets, and other essential research information to individuals and their work is still done manually at great expense in time and effort. Given that one of the greatest benefits of the modern web is the rich array of links between digital objects and related resources that it enables, this is a significant failure. The ability to connect, discover, and access resources is the underpinning premise of open research, so tools to enable this, themselves open, are vital. The increasing adoption of resolvable, persistent identifiers for people, digital objects, and research information offers a means of providing these missing connections. This article describes some of the ways that identifiers can help to unlock the potential of open research, focusing on the Open Researcher and Contributor Identifier (ORCID, a person identifier that also serves to link other identifiers.

  11. A novel shoe scanner using an open-access quadrupole resonance and metal sensor

    Science.gov (United States)

    Crowley, C.; Petrov, T.; Mitchell, O.; Shelby, R.; Ficke, L.; Kumar, S.; Prado, P.

    2007-04-01

    Airport security and efficiency are both compromised by the process of requiring passengers to remove their shoe. A novel shoe scanner developed at the GE Security San Diego Center of Excellence uses both Quadrupole Resonance (QR) and configuration-sensitive metal detection to identify threats hidden in shoes. The shoe scanner was developed with an open-access chassis and scanning chamber that allows passengers to stand in the system in a natural position during the scanning process. More traditional magnetic resonance systems are closed or partially closed and cannot be used for screening personnel because the scanning chambers confine the object in question. The shoe scanner's novelty lies in a particular chassis geometry that allows both QR and metal screening. The resulting scanning system achieves the same level of performance as a more confining system. The shoe scanner is small enough to allow integration with other sensors such as the GE Itemizer FX TM trace detection system. In fact, the first application of the novel shoe scanner is expected to be as a component in a multi-sensor verification and security system known as the Secure Registered Traveler (SRT) Kiosk. The SRT kiosk is designed to be used as part of the TSA's Registered Traveler Program.

  12. MO-E-18C-01: Open Access Web-Based Peer-To-Peer Training and Education in Radiotherapy

    Energy Technology Data Exchange (ETDEWEB)

    Pawlicki, T [UC San Diego Medical Center, La Jolla, CA (United States); Brown, D; Dunscombe, P [Tom Baker Cancer Centre, Calgary, AB (Canada); Mutic, S [Washington University School of Medicine, Saint Louis, MO (United States)

    2014-06-15

    Purpose: Current training and education delivery models have limitations which result in gaps in clinical proficiency with equipment, procedures, and techniques. Educational and training opportunities offered by vendors and professional societies are by their nature not available at point of need or for the life of clinical systems. The objective of this work is to leverage modern communications technology to provide peer-to-peer training and education for radiotherapy professionals, in the clinic and on demand, as they undertake their clinical duties. Methods: We have developed a free of charge web site ( https://i.treatsafely.org ) using the Google App Engine and datastore (NDB, GQL), Python with AJAX-RPC, and Javascript. The site is a radiotherapy-specific hosting service to which user-created videos illustrating clinical or physics processes and other relevant educational material can be uploaded. Efficient navigation to the material of interest is provided through several RT specific search tools and videos can be scored by users, thus providing comprehensive peer review of the site content. The site also supports multilingual narration\\translation of videos, a quiz function for competence assessment and a library function allowing groups or institutions to define their standard operating procedures based on the video content. Results: The website went live in August 2013 and currently has over 680 registered users from 55 countries; 27.2% from the United States, 9.8% from India, 8.3% from the United Kingdom, 7.3% from Brazil, and 47.5% from other countries. The users include physicists (57.4%), Oncologists (12.5%), therapists (8.2%) and dosimetrists (4.8%). There are 75 videos to date including English, Portuguese, Mandarin, and Thai. Conclusion: Based on the initial acceptance of the site, we conclude that this open access web-based peer-to-peer tool is fulfilling an important need in radiotherapy training and education. Site functionality should expand in

  13. The SCOAP3 initiative and the Open Access Article-Processing-Charge market: global partnership and competition improve value in the dissemination of science

    CERN Document Server

    Romeu, Clément; Kohls, Alexander; Mansuy, Anne; Mele, Salvatore; Vesper, Martin

    2014-01-01

    The SCOAP3 (Sponsoring Consortium for Open Access Publishing in Particle Physics) initiative is an international partnership to convert to Open Access the published literature in the field of High-Energy Physics (HEP). It has been in operation since January 2014, and covers more than 4’000 articles/year. Originally initiated by CERN, the European Organization for Nuclear Research, and now counting partners representing 41 countries and 3 intergovernmental organizations, SCOAP3 has successfully converted to Open Access all, or part of, 6 HEP journals previously restricted to subscribers. It is also supporting publication of articles in 4 existing Open Access journals. As a “Gold” Open Access initiative, SCOAP3 pays Article Processing Charges (APCs), as publishers’ source of revenue for the publication service. Differentiating itself from other Open Access initiatives, SCOAP3 set APCs through a tendering process, correlating quality and price, at consistent conditions across participating publishers. Th...

  14. Gold Open Access Publishing in Mega-Journals: Developing Countries Pay the Price of Western Premium Academic Output

    NARCIS (Netherlands)

    Ellers, Jacintha; Crowther, Thomas W.; Harvey, Jeffrey A.

    2017-01-01

    Open access publishing (OAP) makes research output freely available, and several national governments have now made OAP mandatory for all publicly funded research. Gold OAP is a common form of OAP where the author pays an article processing charge (APC) to make the article freely available to

  15. Free Open Access Medical Education resource knowledge and utilisation amongst Emergency Medicine trainees: A survey in four countries

    Directory of Open Access Journals (Sweden)

    Natalie Thurtle

    2016-03-01

    The Emergency Medicine trainees in both developed and low resource settings studied were aware that Free Open Access Medical Education resources exist, but trainees in lower income settings were generally less aware of specific resources. Lack of internet and device access was not a barrier to use in this group.

  16. Employment-Driven Online Student Attrition and the Assessment Policy Divide: An Australian Open-Access Higher Education Perspective

    Science.gov (United States)

    Moore, Catherine; Greenland, Steven

    2017-01-01

    Two hundred and twenty-six qualitative interviews with students studying at Australia's largest online tertiary education organisation, Open Universities Australia (OUA), found that failure to complete assessments due to unexpected and unavoidable employment commitments was the standout reason for dropping out of its open-access courses. The…

  17. Scholarly Publishing's Evolving Landscape: Impact Metrics, Electronic-Only Journals, and Open Access in Journalism and Communication Research

    Science.gov (United States)

    Antell, Karen; Foote, Joe S.; Foote, Jody Bales

    2016-01-01

    This study surveys the landscape of scholarly publishing, with particular emphasis on scholarly journals in the communication discipline, measuring the shift to electronic publishing in six selected disciplines and exploring two other important emerging topics: open-access publishing and new journal citation metrics. The goals are to inform…

  18. Peer review quality and transparency of the peer-review process in open access and subscription journals

    NARCIS (Netherlands)

    Wicherts, J.M.

    2016-01-01

    Background Recent controversies highlighting substandard peer review in Open Access (OA) and traditional (subscription) journals have increased the need for authors, funders, publishers, and institutions to assure quality of peer-review in academic journals. I propose that transparency of the

  19. Modularity, Vertical Integration, and Open Access Policies: Towards a Convergence of Antitrust and Regulation in the Age of the Internet

    OpenAIRE

    Farrell, Joseph; Weiser, Philip

    2002-01-01

    This article aims to help regulators and commentators incorporate both Chicago School and post-Chicago School arguments in assessing whether regulation should mandate open access to information platforms. The authors outline three alternative models that the FCC could adopt to guide its regulation of information platforms in the future and facilitate a true convergence between antitrust and regulatory policy.

  20. Management of chronic heart failure in the community: role of a hospital based open access heart failure service

    OpenAIRE

    Shah, S; Davies, M K; Cartwright, D; Nightingale, P

    2004-01-01

    Objective: To evaluate the role of an open access heart failure service based at a teaching hospital for the diagnosis and treatment optimisation of patients with heart failure in the community and to identify measures that may further enhance the effectiveness of such a service.

  1. Repository Profile: REPOSITAN. The Open Access Repository: Citizen view of the research in Andalucía, Spain

    OpenAIRE

    Barros, Beatríz

    2014-01-01

    REPOSITAN is the official name of the institutional Open Access Respository for the Region of Andalusia hosted by CEICE, the regional ministery that funds research, development and innovation projects within the whole region. The repository is part of SICA2, the second generation of an institutional Competence Research Information System.

  2. Efficient, quality-assured data capture in operational research through innovative use of open-access technology

    DEFF Research Database (Denmark)

    Kumar, A M V; Naik, B; Guddemane, D K

    2013-01-01

    to these issues can pose a significant bottleneck for operational research in resource-limited settings. In this article, we describe an innovative and efficient way of coordinating data capture in multicentre operational research using a combination of three open access technologies-EpiData for data capture...

  3. Grantees Guide to Research Databases at IDRC

    International Development Research Centre (IDRC) Digital Library (Canada)

    Directory of Open Access Journals. • ERIC. • HeinOnline. • OECD iLibrary. • Persée. • Project MUSE. • SciELO. • World Bank eLibrary. IDRC Discovery Service makes it possible to search the content of external databases simultaneously with EBSCO databases, using the EBSCO interface. 2. How to search commercial ...

  4. [THE FAILURE MODES AND EFFECTS ANALYSIS FACILITATES A SAFE, TIME AND MONEY SAVING OPEN ACCESS COLONOSCOPY SERVICE].

    Science.gov (United States)

    Gingold-Belfer, Rachel; Niv, Yaron; Horev, Nehama; Gross, Shuli; Sahar, Nadav; Dickman, Ram

    2017-04-01

    Failure modes and effects analysis (FMEA) is used for the identification of potential risks in health care processes. We used a specific FMEA - based form for direct referral for colonoscopy and assessed it for procedurerelated perforations. Ten experts in endoscopy evaluated and computed the entire referral process, modes of preparation for the endoscopic procedure, the endoscopic procedure itself and the discharge process. We used FMEA assessing for likelihood of occurrence, detection and severity and calculated the risk profile number (RPN) for each of the above points. According to the highest RPN results we designed a specific open access referral form and then compared the occurrence of colonic perforations (between 2010 and 2013) in patients who were referred through the open access arm (Group 1) to those who had a prior clinical consultation (non-open access, Group 2). Our experts in endoscopy (5 physicians and 5 nurses) identified 3 categories of failure modes that, on average, reached the highest RPNs. We identified 9,558 colonoscopies in group 1, and 12,567 in group 2. Perforations were identified in three patients from the open access group (1:3186, 0.03%) and in 10 from group 2 (1:1256, 0.07%) (p = 0.024). Direct referral for colonoscopy saved 9,558 pre-procedure consultations and the sum of $850,000. The FMEA tool-based specific referral form facilitates a safe, time and money saving open access colonoscopy service. Our form may be adopted by other gastroenterological clinics in Israel.

  5. Awareness of "predatory" open-access journals among prospective veterinary and medical authors attending scientific writing workshops

    Directory of Open Access Journals (Sweden)

    Mary M Christopher

    2015-08-01

    Full Text Available Authors face many choices when selecting a journal for publication. Prospective authors, especially trainees, may be unaware of predatory online journals or how to differentiate them from legitimate journals. In this study we assessed awareness of open-access and predatory journals among prospective authors attending scientific writing workshops; our long-term goal was to inform educational goals for the workshops. We surveyed participants of writing workshops at veterinary and medical schools and an international conference over a 1-year period. The survey included 14 statements for respondents to indicate agreement level on a Likert-like scale and four questions on awareness of resources about predatory journals; respondents also defined predatory journal. A total of 145 participants completed the survey: 106 (73.1% from veterinary schools and 86 (59.3% graduate students or residents. Fewer faculty (vs trainees agreed that open access was an important factor in deciding where to publish; faculty and postdoctoral researchers were more likely to expect to pay more to publish in an open-access journal. Most respondents (120/145, 82.7% agreed/strongly agreed that the decision to accept a manuscript should not be influenced by publication charges, but 50% (56/112 indicated they didn’t know how publishing costs were supported. Of the 142 respondents who answered, 33 (23.0% indicated awareness of the term predatory journal; 34 (23.9% were aware of the Directory of Open Access Journals; 24 (16.9% were aware of the Science sting article about predatory journals; and 7 (4.8% were aware of Beall’s list. Most (93/144, 64.5% definitions of predatory journals described poor but not predatory journal practices, and some respondents misunderstood the term completely. Mentors should help novice authors to be aware of predatory journals and to distinguish between legitimate and illegitimate open-access journals, thus selecting the best journal for their

  6. Article processing charges for open access publication—the situation for research intensive universities in the USA and Canada

    Directory of Open Access Journals (Sweden)

    David Solomon

    2016-07-01

    Full Text Available Background. Open access (OA publishing via article processing charges (APCs is growing as an alternative to subscription publishing. The Pay It Forward (PIF Project is exploring the feasibility of transitioning from paying subscriptions to funding APCs for faculty at research intensive universities. Estimating of the cost of APCs for the journals authors at research intensive universities tend to publish is essential for the PIF project and similar initiatives. This paper presents our research into this question. Methods. We identified APC prices for publications by authors at the 4 research intensive United States (US and Canadian universities involved in the study. We also obtained APC payment records from several Western European universities and funding agencies. Both data sets were merged with Web of Science (WoS metadata. We calculated the average APCs for articles and proceedings in 13 discipline categories published by researchers at research intensive universities. We also identified 41 journals published by traditionally subscription publishers which have recently converted to APC funded OA and recorded the APCs they charge. Results. We identified 7,629 payment records from the 4 European APC payment databases and 14,356 OA articles authored by PIF partner university faculty for which we had listed APC prices. APCs for full OA journals published by PIF authors averaged 1,775 USD; full OA journal APCs paid by Western European funders averaged 1,865 USD; hybrid APCs paid by Western European funders averaged 2,887 USD. The APC for converted journals published by major subscription publishers averaged 1,825 USD. APC funded OA is concentrated in the life and basic sciences. APCs funded articles in the social sciences and humanities are often multidisciplinary and published in journals such as PLOS ONE that largely publish in the life sciences. Conclusions. Full OA journal APCs average a little under 2,000 USD while hybrid articles average

  7. Article processing charges for open access publication-the situation for research intensive universities in the USA and Canada.

    Science.gov (United States)

    Solomon, David; Björk, Bo-Christer

    2016-01-01

    Background. Open access (OA) publishing via article processing charges (APCs) is growing as an alternative to subscription publishing. The Pay It Forward (PIF) Project is exploring the feasibility of transitioning from paying subscriptions to funding APCs for faculty at research intensive universities. Estimating of the cost of APCs for the journals authors at research intensive universities tend to publish is essential for the PIF project and similar initiatives. This paper presents our research into this question. Methods. We identified APC prices for publications by authors at the 4 research intensive United States (US) and Canadian universities involved in the study. We also obtained APC payment records from several Western European universities and funding agencies. Both data sets were merged with Web of Science (WoS) metadata. We calculated the average APCs for articles and proceedings in 13 discipline categories published by researchers at research intensive universities. We also identified 41 journals published by traditionally subscription publishers which have recently converted to APC funded OA and recorded the APCs they charge. Results. We identified 7,629 payment records from the 4 European APC payment databases and 14,356 OA articles authored by PIF partner university faculty for which we had listed APC prices. APCs for full OA journals published by PIF authors averaged 1,775 USD; full OA journal APCs paid by Western European funders averaged 1,865 USD; hybrid APCs paid by Western European funders averaged 2,887 USD. The APC for converted journals published by major subscription publishers averaged 1,825 USD. APC funded OA is concentrated in the life and basic sciences. APCs funded articles in the social sciences and humanities are often multidisciplinary and published in journals such as PLOS ONE that largely publish in the life sciences. Conclusions. Full OA journal APCs average a little under 2,000 USD while hybrid articles average about 3,000 USD

  8. Creating an open access cal/val repository via the LACO-Wiki online validation platform

    Science.gov (United States)

    Perger, Christoph; See, Linda; Dresel, Christopher; Weichselbaum, Juergen; Fritz, Steffen

    2017-04-01

    to simplify the workflows as much as possible so that the tool can be used both professionally and in an educational or non-expert context. By using the tool for validation, the user agrees to share their validation samples and therefore contribute to an open access cal/val repository. Interest in the use of LACO-Wiki for validation of national land cover or related products has already been expressed, e.g. by national stakeholders under the umbrella of the European Environment Agency (EEA), and for global products by GOFC/GOLD and the Group on Earth Observation (GEO). Thus, LACO-Wiki has the potential to become the focal point around which an international land cover validation community could be built, and could significantly advance the state-of-the-art in land cover cal/val, particularly given recent developments in opening up of the Landsat archive and the open availability of Sentinel imagery. The platform will also offer open access to crowdsourced in-situ data, for example, from the recently developed LACO-Wiki mobile smartphone app, which can be used to collect additional validation information in the field, as well as to validation data collected via its partner platform, Geo-Wiki, where an already established community of citizen scientists collect land cover and land use data for different research applications.

  9. Open access in the patient-centered medical home: lessons from the Veterans Health Administration.

    Science.gov (United States)

    True, Gala; Butler, Anneliese E; Lamparska, Bozena G; Lempa, Michele L; Shea, Judy A; Asch, David A; Werner, Rachel M

    2013-04-01

    The Veterans Health Administration (VHA) has undertaken a 5-year initiative to transform to a patient-centered medical home model. An early focus of implementation was on creating open access, defined as continuity and capacity in primary care. We describe the impact of readiness for implementation on efforts of pilot teams to make changes to improve access and identify successful strategies used by early adopters to overcome barriers to change. A qualitative, formative evaluation of the first 18 months of implementation in one Veterans Integrated Service Network (VISN) spread across six states. Members of local implementation teams including administrators, primary care providers, and staff from primary care clinics located at 10 medical centers and 45 outpatient clinics. We conducted site visits during the first 6 months of implementation, observations at Learning Collaboratives, semi-structured interviews, and review of internal organizational documents. All data collection took place between April 2010 and December 2011. Early adopters employed various strategies to enhance access, with a focus on decreasing demand for face-to-face care, increasing supply of different types of primary care encounters, and improving clinic efficiencies. Our interviews with key contacts revealed three important areas where readiness for implementation (or lack thereof) had an impact on interventions to improve access: leadership engagement, staffing resources, and access to information and knowledge. Key factors related to readiness for implementation had an impact on which interventions pilot teams could put into place, as well as the viability and sustainability of access gains. Wide variations in interventions to improve access occurring across sites situated within one organization have important implications for efforts to measure the impact of enhanced access on patient outcomes, costs, and other systems-level indicators of the Medical Home.

  10. Satisfaction in open access versus traditional referral for upper endoscopy in children.

    Science.gov (United States)

    Isaac, Daniela Migliarese; Persad, Rabin; Huynh, Hien Q; Shirton, Leanne; Turner, Justine M

    2015-05-01

    In traditional access endoscopy (TAE), patients are booked for endoscopy following a gastroenterology clinic assessment. In contrast, open access endoscopy (OAE) patients are seen for the first time on the day of the procedure, providing same day procedural consent. Controversy exists over the use of OAE in adults, both with the consent process and with patient satisfaction. No literature exists describing satisfaction with OAE in pediatrics. We therefore aimed to assess pediatric patient and caregiver satisfaction in OAE compared with TAE. Consecutive pediatric patients, and their caregivers, undergoing elective upper endoscopy from May to December 2012 at the Stollery Children's Hospital (Edmonton, Alberta, Canada) were consented for a cross-sectional survey. Seven preprocedure and 5 postprocedure questions were completed regarding mood and satisfaction with the wait time and the information provided. Group demographics and endoscopy wait times were collected. Median wait time with OAE was less compared with TAE (57 days vs 196 days, P < 0.001). OAE patients reported worse mood preprocedure than TAE patients (35.3% vs 10.7%, P = 0.046). OAE caregivers and patients reported more mood disturbance if required to wait longer for endoscopy by attending clinic preprocedure (OAE caregivers 62.2%, OAE patients 64.7%). OAE is associated with worse preendoscopy patient mood; however, children and caregivers seem concerned about longer wait times associated with TAE. Given the significantly shorter wait times in OAE, identifying methods to minimize present limitations of OAE will be useful to improve clinical practices in pediatric gastroenterology.

  11. REVISTAS OPEN ACCESS: CARACTERÍSTICAS, MODELOS ECONÓMICOS Y TENDENCIAS

    Directory of Open Access Journals (Sweden)

    REMEDIOS MELERO

    2011-12-01

    Full Text Available Existen ejemplos de revistas electrónica científicas de acceso abierto (open access, OA desde la aparición de Internet, sin embargo con la Declaración de Budapest en la que se define el significado de OA y las revistas como una vía para alcanzarlo es cuando empieza a identificarse revistas de acceso abierto que ya lo eran, y a surgir otras con modelos inexistentes en la época de las revistas en versión impresa. En este trabajo se analiza cómo el movimiento OA ha repercutido sobre las vías de comunicación y acceso a la producción científica, y las consecuencias que ha tenido en la evolución del mercado editorial y los nuevos modelos de revistas basados no exclusivamente en el acceso por pago de suscripción. También se exponen resumidamente algunas de las tendencias en cuanto a la publicación electrónica, que desde el punto de vista de la comunidad científica tienen que ver con la creación de entornos colaborativos, el intercambio y la reutilización de datos, entre otras, y desde el punto de vista comercial por pasar de un modelo de proveedor de contenidos al de servicios, en el que la calidad y mejores precios hagan a las editoriales empresas más competitivas.

  12. Open access to journal articles in dentistry: Prevalence and citation impact.

    Science.gov (United States)

    Hua, Fang; Sun, Heyuan; Walsh, Tanya; Worthington, Helen; Glenny, Anne-Marie

    2016-04-01

    To investigate the current prevalence of open access (OA) in the field of dentistry, the means used to provide OA, as well as the association between OA and citation counts. PubMed was searched for dental articles published in 2013. The OA status of each article was determined by manually checking Google, Google Scholar, PubMed and ResearchGate. Citation data were extracted from Google Scholar, Scopus and Web of Science. Chi-square tests were used to compare the OA prevalence by different subjects, study types, and continents of origin. The association between OA and citation count was studied with multivariable logistic regression analyses. A random sample of 908 articles was deemed eligible and therefore included. Among these, 416 were found freely available online, indicating an overall OA rate of 45.8%. Significant difference in OA rate was detected among articles in different subjects (P<0.001) and among those from different continents (P<0.001). Of articles that were OA, 74.2% were available via self-archiving ('Green road' OA), 53.3% were available from publishers ('Gold road' OA). According to multivariable logistic regression analyses, OA status was not significantly associated with either the existence of citation (P=0.37) or the level of citation (P=0.52). In the field of dentistry, 54% of recent journal articles are behind the paywall (non-OA) one year after their publication dates. The 'Green road' of providing OA was more common than the 'Gold road'. No evidence suggested that OA articles received significantly more citations than non-OA articles. Copyright © 2016 Elsevier Ltd. All rights reserved.

  13. FORMS OF DEMOCRACY IN EDUCATION: Open Access and Distance Education–Athens, Greece

    Directory of Open Access Journals (Sweden)

    Reviewed by Antonis LIONARAKIS

    2008-01-01

    Full Text Available The 4th International Conference in Open and Distance Learning - Forms of Democracy in Education: Open Access and Distance Education (ICODL 2007 had a special role to play this time: it was focused on the relationship between distance education and democratic principles which are connected and interrelated to eachother. These principles identify a new social role of distance education. Educational applications can be more flexible and effective when they follow some basic From the early beginning open universities and alternative forms of education have defined e democratic framework for educational systems. Their connection with the conventional educational system has influenced to a great extend new innovations in the system. With this approach we can realize that distance learning may become a bridge between these innovations and the initial ideals of democracy and human ICODL 2007 took place in Athens, Greece, from 23 to 25 of November 2007. There were 160 papers presented from 36 countries: Greece, Cyprus, Belgium, Spain, Iran,Canada, Turkey, South Africa, Italy, Palestine, France, Ireland, Japan, Nigeria,Bulgaria, USA, Austria, Finland, Pakistan, Great Britain, Ukraine, Egypt, Lithuania, Israel, India, Czech Republic, Brazil, Portugal, Botswana, Barbados–West Indies,The key–note speakers of ICODL 2007 were Professor Alan Tait, Pro-Vice-Chancellor, The Open University/UK, with the title ―What are Open Universities for?‖, Professor Michael Grahame Moore, the Pennsylvania State University and Editor of the American Journal of Distance Education with the title ―The scholarship of distance education: a review of the 40 years of growth and achievement‖ and Professor Paul Clark, Senior Research Fellow in the IET at the UK Open University with the title

  14. Self-selected or mandated, open access increases citation impact for higher quality research.

    Directory of Open Access Journals (Sweden)

    Yassine Gargouri

    Full Text Available BACKGROUND: Articles whose authors have supplemented subscription-based access to the publisher's version by self-archiving their own final draft to make it accessible free for all on the web ("Open Access", OA are cited significantly more than articles in the same journal and year that have not been made OA. Some have suggested that this "OA Advantage" may not be causal but just a self-selection bias, because authors preferentially make higher-quality articles OA. To test this we compared self-selective self-archiving with mandatory self-archiving for a sample of 27,197 articles published 2002-2006 in 1,984 journals. METHDOLOGY/PRINCIPAL FINDINGS: The OA Advantage proved just as high for both. Logistic regression analysis showed that the advantage is independent of other correlates of citations (article age; journal impact factor; number of co-authors, references or pages; field; article type; or country and highest for the most highly cited articles. The OA Advantage is real, independent and causal, but skewed. Its size is indeed correlated with quality, just as citations themselves are (the top 20% of articles receive about 80% of all citations. CONCLUSIONS/SIGNIFICANCE: The OA advantage is greater for the more citable articles, not because of a quality bias from authors self-selecting what to make OA, but because of a quality advantage, from users self-selecting what to use and cite, freed by OA from the constraints of selective accessibility to subscribers only. It is hoped that these findings will help motivate the adoption of OA self-archiving mandates by universities, research institutions and research funders.

  15. The Copernicus Climate Change Service (C3S): Open Access to a Climate Data Store

    Science.gov (United States)

    Thepaut, Jean-Noel; Dee, Dick

    2016-04-01

    In November 2014, The European Centre for Medium-range Weather Forecasts (ECMWF) signed an agreement with the European Commission to deliver two of the Copernicus Earth Observation Programme Services on the Commission's behalf. The ECMWF delivered services - the Copernicus Climate Change Service (C3S) and Atmosphere Monitoring Service (CAMS) - will bring a consistent standard to how we monitor and predict atmospheric conditions and climate change. They will maximise the potential of past, current and future earth observations - ground, ocean, airborne, satellite - and analyse these to monitor and predict atmospheric conditions and in the future, climate change. With the wealth of free and open data that the services provide, they will help business users to assess the impact of their business decisions and make informed choices, delivering a more energy efficient and climate aware economy. These sound investment decisions now will not only stimulate growth in the short term, but reduce the impact of climate change on the economy and society in the future. C3S is in its proof of concept phase and through its Climate Data Store will provide • global and regional climate data reanalyses; • multi-model seasonal forecasts; • customisable visual data to enable examination of wide range of scenarios and model the impact of changes; • access to all the underlying data, including climate data records from various satellite and in-situ observations. In addition, C3S will provide key indicators on climate change drivers (such as carbon dioxide) and impacts (such as reducing glaciers). The aim of these indicators will be to support European adaptation and mitigation policies in a number of economic sectors. At the heart of the Service is the provision of open access to a one stop shop (the Climate Data Store) of climate data and modelling, analysing more than 20 Essential Climate Variables to build a global picture of our past, present and future climate and developing

  16. Quality Assessment of Studies Published in Open Access and Subscription Journals: Results of a Systematic Evaluation.

    Science.gov (United States)

    Pastorino, Roberta; Milovanovic, Sonja; Stojanovic, Jovana; Efremov, Ljupcho; Amore, Rosarita; Boccia, Stefania

    2016-01-01

    Along with the proliferation of Open Access (OA) publishing, the interest for comparing the scientific quality of studies published in OA journals versus subscription journals has also increased. With our study we aimed to compare the methodological quality and the quality of reporting of primary epidemiological studies and systematic reviews and meta-analyses published in OA and non-OA journals. In order to identify the studies to appraise, we listed all OA and non-OA journals which published in 2013 at least one primary epidemiologic study (case-control or cohort study design), and at least one systematic review or meta-analysis in the field of oncology. For the appraisal, we picked up the first studies published in 2013 with case-control or cohort study design from OA journals (Group A; n = 12), and in the same time period from non-OA journals (Group B; n = 26); the first systematic reviews and meta-analyses published in 2013 from OA journals (Group C; n = 15), and in the same time period from non-OA journals (Group D; n = 32). We evaluated the methodological quality of studies by assessing the compliance of case-control and cohort studies to Newcastle and Ottawa Scale (NOS) scale, and the compliance of systematic reviews and meta-analyses to Assessment of Multiple Systematic Reviews (AMSTAR) scale. The quality of reporting was assessed considering the adherence of case-control and cohort studies to STrengthening the Reporting of OBservational studies in Epidemiology (STROBE) checklist, and the adherence of systematic reviews and meta-analyses to Preferred Reporting Items for Systematic reviews and Meta-Analysis (PRISMA) checklist. Among case-control and cohort studies published in OA and non-OA journals, we did not observe significant differences in the median value of NOS score (Group A: 7 (IQR 7-8) versus Group B: 8 (7-9); p = 0.5) and in the adherence to STROBE checklist (Group A, 75% versus Group B, 80%; p = 0.1). The results did not change after adjustment

  17. National Geothermal Data System: Open Access to Geoscience Data, Maps, and Documents

    Science.gov (United States)

    Caudill, C. M.; Richard, S. M.; Musil, L.; Sonnenschein, A.; Good, J.

    2014-12-01

    The U.S. National Geothermal Data System (NGDS) provides free open access to millions of geoscience data records, publications, maps, and reports via distributed web services to propel geothermal research, development, and production. NGDS is built on the US Geoscience Information Network (USGIN) data integration framework, which is a joint undertaking of the USGS and the Association of American State Geologists (AASG), and is compliant with international standards and protocols. NGDS currently serves geoscience information from 60+ data providers in all 50 states. Free and open source software is used in this federated system where data owners maintain control of their data. This interactive online system makes geoscience data easily discoverable, accessible, and interoperable at no cost to users. The dynamic project site http://geothermaldata.org serves as the information source and gateway to the system, allowing data and applications discovery and availability of the system's data feed. It also provides access to NGDS specifications and the free and open source code base (on GitHub), a map-centric and library style search interface, other software applications utilizing NGDS services, NGDS tutorials (via YouTube and USGIN site), and user-created tools and scripts. The user-friendly map-centric web-based application has been created to support finding, visualizing, mapping, and acquisition of data based on topic, location, time, provider, or key words. Geographic datasets visualized through the map interface also allow users to inspect the details of individual GIS data points (e.g. wells, geologic units, etc.). In addition, the interface provides the information necessary for users to access the GIS data from third party software applications such as GoogleEarth, UDig, and ArcGIS. A redistributable, free and open source software package called GINstack (USGIN software stack) was also created to give data providers a simple way to release data using

  18. Quality Assessment of Studies Published in Open Access and Subscription Journals: Results of a Systematic Evaluation.

    Directory of Open Access Journals (Sweden)

    Roberta Pastorino

    Full Text Available Along with the proliferation of Open Access (OA publishing, the interest for comparing the scientific quality of studies published in OA journals versus subscription journals has also increased. With our study we aimed to compare the methodological quality and the quality of reporting of primary epidemiological studies and systematic reviews and meta-analyses published in OA and non-OA journals.In order to identify the studies to appraise, we listed all OA and non-OA journals which published in 2013 at least one primary epidemiologic study (case-control or cohort study design, and at least one systematic review or meta-analysis in the field of oncology. For the appraisal, we picked up the first studies published in 2013 with case-control or cohort study design from OA journals (Group A; n = 12, and in the same time period from non-OA journals (Group B; n = 26; the first systematic reviews and meta-analyses published in 2013 from OA journals (Group C; n = 15, and in the same time period from non-OA journals (Group D; n = 32. We evaluated the methodological quality of studies by assessing the compliance of case-control and cohort studies to Newcastle and Ottawa Scale (NOS scale, and the compliance of systematic reviews and meta-analyses to Assessment of Multiple Systematic Reviews (AMSTAR scale. The quality of reporting was assessed considering the adherence of case-control and cohort studies to STrengthening the Reporting of OBservational studies in Epidemiology (STROBE checklist, and the adherence of systematic reviews and meta-analyses to Preferred Reporting Items for Systematic reviews and Meta-Analysis (PRISMA checklist.Among case-control and cohort studies published in OA and non-OA journals, we did not observe significant differences in the median value of NOS score (Group A: 7 (IQR 7-8 versus Group B: 8 (7-9; p = 0.5 and in the adherence to STROBE checklist (Group A, 75% versus Group B, 80%; p = 0.1. The results did not change after

  19. Automated mass correction and data interpretation for protein open-access liquid chromatography-mass spectrometry.

    Science.gov (United States)

    Wagner, Craig D; Hall, John T; White, Wendy L; Miller, Luke A D; Williams, Jon D

    2007-02-01

    Characterization of recombinant protein purification fractions and final products by liquid chromatography-mass spectrometry (LC/MS) are requested more frequently each year. A protein open-access (OA) LC/MS system was developed in our laboratory to meet this demand. This paper compares the system that we originally implemented in our facilities in 2003 to the one now in use, and discusses, in more detail, recent enhancements that have improved its robustness, reliability, and data reporting capabilities. The system utilizes instruments equipped with reversed-phase chromatography and an orthogonal accelerated time-of-flight mass spectrometer fitted with an electrospray source. Sample analysis requests are accomplished using a simple form on a web-enabled laboratory information management system (LIMS). This distributed form is accessible from any intranet-connected company desktop computer. Automated data acquisition and processing are performed using a combination of in-house (OA-Self Service, OA-Monitor, and OA-Analysis Engine) and vendor-supplied programs (AutoLynx, and OpenLynx) located on acquisition computers and off-line processing workstations. Analysis results are then reported via the same web-based LIMS. Also presented are solutions to problems not addressed on commercially available, small-molecule OA-LC/MS systems. These include automated transforming of mass-to-charge (m/z) spectra to mass spectra and automated data interpretation that considers minor variants to the protein sequence-such as common post-translational modifications (PTMs). Currently, our protein OA-LC/MS platform runs on five LC/MS instruments located in three separate GlaxoSmithKline R&D sites in the US and UK. To date, more than 8000 protein OA-LC/MS samples have been analyzed. With these user friendly and highly automated OA systems in place, mass spectrometry plays a key role in assessing the quality of recombinant proteins, either produced at our facilities or bought from external

  20. Open access to journal articles in oncology: current situation and citation impact.

    Science.gov (United States)

    Hua, F; Sun, H; Walsh, T; Glenny, A-M; Worthington, H

    2017-10-01

    Recent years have seen numerous efforts and resources devoted to the development of open access (OA), but the current OA situation of the oncology literature remains unknown. We conducted this cross-sectional study to determine the current share and provision methods of OA in the field of oncology, identify predictors of OA status (OA versus non-OA), and study the association between OA and citation counts. PubMed was searched for oncology-related, peer-reviewed journal articles published in December 2014. Google, Google Scholar, PubMed, ResearchGate, OpenDOAR and OAIster were manually checked to assess the OA status of each included article. Citation data were extracted from Web of Science, Scopus and Google Scholar. Descriptive statistics were used to summarize the OA proportion (primary outcome) and OA provision methods. Multivariable logistic regression and multilevel generalized linear model analyses were performed to study predictors of OA status and the association between OA and citation counts, respectively. In a random sample of 1000 articles, 912 were deemed eligible and therefore included. Of these, the full-texts of 530 articles (58.1%; 95% CI: 54.9-61.3) were freely available online: 314 (34.4%) were available from publishers ('Gold road' to OA), 424 (46.5%) were available via self-archiving ('Green road' to OA). According to multivariable regression analyses, impact factor, publisher type, language, research type, number of authors, continent of origin, and country income were significant predictors of articles' OA status; OA articles received a citation rate 1.24 times the incidence rate for non-OA articles (95% CI: 1.05-1.47; P = 0.012). Based on our sample, in the field of oncology, 42% of recent journal articles are behind the pay-wall (non-OA) 1 year after publication; the 'Green road' of providing OA is more common than the 'Gold road'; OA is associated with higher citation counts.