Effects of exotic species on Yellowstone's grizzly bears

Science.gov (United States)

Reinhart, Daniel P.; Haroldson, Mark A.; Mattson, D.J.; Gunther, Kerry A.

2001-01-01

Humans have affected grizzly bears (Ursus arctos horribilis) by direct mortality, competition for space and resources, and introduction of exotic species. Exotic organisms that have affected grizzly bears in the Greater Yellowstone Area include common dandelion (Taraxacum officinale), nonnative clovers (Trifolium spp.), domesticated livestock, bovine brucellosis (Brucella abortus), lake trout (Salvelinus namaycush), and white pine blister rust (Cronartium ribicola). Some bears consume substantial amounts of dandelion and clover. However, these exotic foods provide little digested energy compared to higher-quality bear foods. Domestic livestock are of greater energetic value, but use of this food by bears often leads to conflicts with humans and subsequent increases in bear mortality. Lake trout, blister rust, and brucellosis diminish grizzly bears foods. Lake trout prey on native cutthroat trout (Oncorhynchus clarkii) in Yellowstone Lake; white pine blister rust has the potential to destroy native whitebark pine (Pinus albicaulis) stands; and management response to bovine brucellosis, a disease found in the Yellowstone bison (Bison bison) and elk (Cervus elaphus), could reduce populations of these 2 species. Exotic species will likely cause more harm than good for Yellowstone grizzly bears. Managers have few options to mitigate or contain the impacts of exotics on Yellowstone's grizzly bears. Moreover, their potential negative impacts have only begun to unfold. Exotic species may lead to the loss of substantial highquality grizzly bear foods, including much of the bison, trout, and pine seeds that Yellowstone grizzly bears currently depend upon.

Photosynthetic temperature responses of tree species in Rwanda: evidence of pronounced negative effects of high temperature in montane rainforest climax species.

Science.gov (United States)

Vårhammar, Angelica; Wallin, Göran; McLean, Christopher M; Dusenge, Mirindi Eric; Medlyn, Belinda E; Hasper, Thomas B; Nsabimana, Donat; Uddling, Johan

2015-05-01

The sensitivity of photosynthetic metabolism to temperature has been identified as a key uncertainty for projecting the magnitude of the terrestrial feedback on future climate change. While temperature responses of photosynthetic capacities have been comparatively well investigated in temperate species, the responses of tropical tree species remain unexplored. We compared the responses of seedlings of native cold-adapted tropical montane rainforest tree species with those of exotic warm-adapted plantation species, all growing in an intermediate temperature common garden in Rwanda. Leaf gas exchange responses to carbon dioxide (CO2 ) at different temperatures (20-40°C) were used to assess the temperature responses of biochemical photosynthetic capacities. Analyses revealed a lower optimum temperature for photosynthetic electron transport rates than for Rubisco carboxylation rates, along with lower electron transport optima in the native cold-adapted than in the exotic warm-adapted species. The photosynthetic optimum temperatures were generally exceeded by daytime peak leaf temperatures, in particular in the native montane rainforest climax species. This study thus provides evidence of pronounced negative effects of high temperature in tropical trees and indicates high susceptibility of montane rainforest climax species to future global warming. © 2015 The Authors. New Phytologist © 2015 New Phytologist Trust.

Farmers' perceptions about exotic multipurpose fodder trees and constraints to their adoption

NARCIS (Netherlands)

Mekoya, A.; Oosting, S.J.; Fernandez-Rivera, S.; Zijpp, van der A.J.

2008-01-01

Many organizations in Ethiopia have for many years promoted exotic multipurpose fodder trees (EMPFT) for livestock feed and soil improvement. Despite the apparent benefits, the number of farmers planting these trees was low. The objectives were to elucidate farmers¿ perceptions about their use

Physico-chemical properties of topsoil under indigenous and exotic ...

African Journals Online (AJOL)

This study evaluated selected physico-chemical properties of topsoil under monoculture plantation of an indigenous tree species - Nauclea diderrichii, and those of four exotic tree species – Theobroma cacao, Gmelina arborea, Pinus caribaea and Tectona grandis, located in Omo Biosphere Reserve, Ogun State, Nigeria.

Reciprocal effects of litter from exotic and congeneric native plant species via soil nutrients.

Directory of Open Access Journals (Sweden)

Annelein Meisner

Full Text Available Invasive exotic plant species are often expected to benefit exclusively from legacy effects of their litter inputs on soil processes and nutrient availability. However, there are relatively few experimental tests determining how litter of exotic plants affects their own growth conditions compared to congeneric native plant species. Here, we test how the legacy of litter from three exotic plant species affects their own performance in comparison to their congeneric natives that co-occur in the invaded habitat. We also analyzed litter effects on soil processes. In all three comparisons, soil with litter from exotic plant species had the highest respiration rates. In two out of the three exotic-native species comparisons, soil with litter from exotic plant species had higher inorganic nitrogen concentrations than their native congener, which was likely due to higher initial litter quality of the exotics. When litter from an exotic plant species had a positive effect on itself, it also had a positive effect on its native congener. We conclude that exotic plant species develop a legacy effect in soil from the invaded range through their litter inputs. This litter legacy effect results in altered soil processes that can promote both the exotic plant species and their native congener.

Exotic plant species receive adequate pollinator service despite variable integration into plant-pollinator networks.

Science.gov (United States)

Thompson, Amibeth H; Knight, Tiffany M

2018-05-01

Both exotic and native plant species rely on insect pollinators for reproductive success, and yet few studies have evaluated whether and how exotic plant species receive services from native pollinators for successful reproduction in their introduced range. Plant species are expected to successfully reproduce in their exotic range if they have low reliance on animal pollinators or if they successfully integrate themselves into resident plant-pollinator networks. Here, we quantify the breeding system, network integration, and pollen limitation for ten focal exotic plant species in North America. Most exotic plant species relied on animal pollinators for reproduction, and these species varied in their network integration. However, plant reproduction was limited by pollen receipt for only one plant species. Our results demonstrate that even poorly integrated exotic plant species can still have high pollination service and high reproductive success. The comprehensive framework considered here provides a method to consider the contribution of plant breeding systems and the pollinator community to pollen limitation, and can be applied to future studies to provide a more synthetic understanding of the factors that determine reproductive success of exotic plant species.

Novel chemistry of invasive plants: exotic species have more unique metabolomic profiles than native congeners.

Science.gov (United States)

Macel, Mirka; de Vos, Ric C H; Jansen, Jeroen J; van der Putten, Wim H; van Dam, Nicole M

2014-07-01

It is often assumed that exotic plants can become invasive when they possess novel secondary chemistry compared with native plants in the introduced range. Using untargeted metabolomic fingerprinting, we compared a broad range of metabolites of six successful exotic plant species and their native congeners of the family Asteraceae. Our results showed that plant chemistry is highly species-specific and diverse among both exotic and native species. Nonetheless, the exotic species had on average a higher total number of metabolites and more species-unique metabolites compared with their native congeners. Herbivory led to an overall increase in metabolites in all plant species. Generalist herbivore performance was lower on most of the exotic species compared with the native species. We conclude that high chemical diversity and large phytochemical uniqueness of the exotic species could be indicative of biological invasion potential.

The abundance and diversity of legume-nodulating rhizobia in 28-year-old plantations of tropical, subtropical, and exotic tree species: a case study from the Forest Reserve of Bandia, Senegal.

Science.gov (United States)

Sene, Godar; Thiao, Mansour; Samba-Mbaye, Ramatoulaye; Khasa, Damase; Kane, Aboubacry; Mbaye, Mame Samba; Beaulieu, Marie-Ève; Manga, Anicet; Sylla, Samba Ndao

2013-01-01

Several fast-growing and multipurpose tree species have been widely used in West Africa to both reverse the tendency of land degradation and restore soil productivity. Although beneficial effects have been reported on soil stabilization, there still remains a lack of information about their impact on soil microorganisms. Our investigation has been carried out in exotic and native tree plantations of 28 years and aimed to survey and compare the abundance and genetic diversity of natural legume-nodulating rhizobia (LNR). The study of LNR is supported by the phylogenetic analysis which clustered the isolates into three genera: Bradyrhizobium, Mesorhizobium, and Sinorhizobium. The results showed close positive correlations between the sizes of LNR populations estimated both in the dry and rainy seasons and the presence of legume tree hosts. There were significant increases in Rhizobium spp. population densities in response to planting with Acacia spp., and high genetic diversities and richness of genotypes were fittest in these tree plantations. This suggests that enrichment of soil Rhizobium spp. populations is host specific. The results indicated also that species of genera Mesorhizobium and Sinorhizobium were lacking in plantations of non-host species. By contrast, there was a widespread distribution of Bradyrhizobium spp. strains across the tree plantations, with no evident specialization in regard to plantation type. Finally, the study provides information about the LNR communities associated with a range of old tree plantations and some aspects of their relationships to soil factors, which may facilitate the management of man-made forest systems that target ecosystem rehabilitation and preservation of soil biota.

Farmers' perceptions about exotic multipurpose fodder trees and constraints to their adoption

OpenAIRE

Mekoya, A.; Oosting, S.J.; Fernandez-Rivera, S.; Zijpp, van der, A.J.

2008-01-01

Many organizations in Ethiopia have for many years promoted exotic multipurpose fodder trees (EMPFT) for livestock feed and soil improvement. Despite the apparent benefits, the number of farmers planting these trees was low. The objectives were to elucidate farmers¿ perceptions about their use value, management practices and constraints to adoption in three districts representing annual (one wheat-based and one teff-based) and perennial (coffee-based) crop-livestock systems in the Ethiopian h...

How exotic does an exotic information and education initiative about the impact of non-indigenous species need to be?

Science.gov (United States)

William F. Hammond

1998-01-01

Providing individuals with effective information, programs, and educational materials about "exotics" or non-indigenous species is generally not a very effective way to get people to act to control, eliminate, and restore damage from exotic species to native ecosystems. Information tends to inform the motivated and educated. Educational research and marketing...

CALORIFIC PROPERTIES OF WASTES FROM SOME EXOTIC WOOD SPECIES

Directory of Open Access Journals (Sweden)

Aurel LUNGULEASA

2016-03-01

Full Text Available This paper aims to present some results about the calorific properties of biomass wastes from exotic species used as fuels. There are presented the main characteristics of biomass energy, respectively the low and high calorific value, burning speed and energy efficiency. Methodology takes into consideration the equipment, wooden species and relationships for calorific determination. The final conclusion resulting from the experiments is that the biomass of exotic species is as good as any other woody biomass, when is used as fuel, because the calorific properties are closely, even slightly higher than of classical fuels.

Gene flow among established Puerto Rican populations of the exotic tree species, Albizia lebbeck.

Science.gov (United States)

Dunphy, B K; Hamrick, J L

2005-04-01

We estimate gene flow and patterns of genetic diversity in Albizia lebbeck, an invasive leguminous tree in the dry forest of southwestern Puerto Rico. Genetic diversity estimates calculated for 10 populations of 24 trees each indicated that these populations may have been formed from multiple introductions. The presence of unique genotypes in the northernmost populations suggests that novel genotypes are still immigrating into the area. This combination of individuals from disparate locations led to high estimates of genetic diversity (He = 0.266, P = 0.67). Indirect estimates of gene flow indicate that only 0.69 migrants per generation move between populations, suggesting that genetic diversity within populations should decrease due to genetic drift. Since migration-drift equilibrium was not found, however, this estimate needs to be viewed with caution. The regular production of pods in this outcrossing species (tm = 0.979) indicates that sufficient outcross pollen is received to insure successful reproduction. Direct estimates of gene flow indicate that between 44 and 100% of pollen received by trees in four small stands of trees (n < 11) was foreign. The role of gene flow in facilitating the spread of this invasive plant species is discussed.

Exotic plant species around Jeongeup Research Complex and RFT industrial complex

International Nuclear Information System (INIS)

Kim, Jin Kyu; Cha, Min Kyoung; Ryu, Tae Ho; Lee, Yun Jong; Kim, Jin Hong

2015-01-01

In Shinjeong-dong of Jeongeup, there are three government-supported research institutes and an RFT industrial complex which is currently being established. Increased human activities can affect flora and fauna as a man-made pressure onto the region. As a baseline study, status of exotic plants was investigated prior to a full operation of the RFT industrial complex. A total of 54 species and 1 variety of naturalized or introduced plants were found in the study area. Among them, three species (Ambrosia artemisifolia var. elatior, Rumex acetocella and Aster pilosus) belong to 'nuisance species', and four species (Phytolacca americana, Iopomoea hederacea, Ereechtites hieracifolia and Rudbeckia laciniata) to ‘monitor species’ designated by the ministry of Environment. Some of naturalized trees and plants were intentionally introduced in this area, while others naturally immigrated. Physalis angulata seems to immigrate in the study area in the form of mixture with animal feeds as its distribution coincided with the transportation route of the animal feeds. Liquidambar styraciflua is amenable to the ecological investigation on the possible expansion of the species to the nearby Naejang National Park as its leave shape and autumn color are very similar to those of maple trees. The number of naturalized plants around the RFT industrial complex will increase with an increase in floating population, in human activities in association with constructions of factories and operations of the complex. The result of this study provides baseline data for assessing the ecological change of the region according to the operation of the RFT industrial complex

Exotic plant species around Jeongeup Research Complex and RFT industrial complex

Energy Technology Data Exchange (ETDEWEB)

Kim, Jin Kyu; Cha, Min Kyoung; Ryu, Tae Ho; Lee, Yun Jong; Kim, Jin Hong [Advanced Radiation Technology Institute, Korea Atomic Energy Research Institute, Jeongeup(Korea, Republic of)

2015-08-15

In Shinjeong-dong of Jeongeup, there are three government-supported research institutes and an RFT industrial complex which is currently being established. Increased human activities can affect flora and fauna as a man-made pressure onto the region. As a baseline study, status of exotic plants was investigated prior to a full operation of the RFT industrial complex. A total of 54 species and 1 variety of naturalized or introduced plants were found in the study area. Among them, three species (Ambrosia artemisifolia var. elatior, Rumex acetocella and Aster pilosus) belong to 'nuisance species', and four species (Phytolacca americana, Iopomoea hederacea, Ereechtites hieracifolia and Rudbeckia laciniata) to ‘monitor species’ designated by the ministry of Environment. Some of naturalized trees and plants were intentionally introduced in this area, while others naturally immigrated. Physalis angulata seems to immigrate in the study area in the form of mixture with animal feeds as its distribution coincided with the transportation route of the animal feeds. Liquidambar styraciflua is amenable to the ecological investigation on the possible expansion of the species to the nearby Naejang National Park as its leave shape and autumn color are very similar to those of maple trees. The number of naturalized plants around the RFT industrial complex will increase with an increase in floating population, in human activities in association with constructions of factories and operations of the complex. The result of this study provides baseline data for assessing the ecological change of the region according to the operation of the RFT industrial complex.

Human land use promotes the abundance and diversity of exotic species on caribbean islands.

Science.gov (United States)

Jesse, Wendy A M; Behm, Jocelyn E; Helmus, Matthew R; Ellers, Jacintha

2018-05-31

Human land use causes major changes in species abundance and composition, yet native and exotic species can exhibit different responses to land use change. Native populations generally decline in human-impacted habitats while exotic species often benefit. In this study, we assessed the effects of human land use on exotic and native reptile diversity, including functional diversity, which relates to the range of habitat use strategies in biotic communities. We surveyed 114 reptile communities from localities that varied in habitat structure and human impact level on two Caribbean islands, and calculated species richness, overall abundance and evenness for every plot. Functional diversity indices were calculated using published trait data, which enabled us to detect signs of trait filtering associated with impacted habitats. Our results show that environmental variation among sampling plots was explained by two PCA ordination axes related to habitat structure (i.e. forest or non-forest) and human impact level (i.e. addition of man-made constructions such as roads and buildings). Several diversity indices were significantly correlated with the two PCA axes, but exotic and native species showed opposing responses. Native species reached the highest abundance in forests, while exotic species were absent in this habitat. Human impact was associated with an increase in exotic abundance and species richness, while native species showed no significant associations. Functional diversity was highest in non-forested environments on both islands, and further increased on St. Martin with the establishment of functionally unique exotic species in non-forested habitat. Habitat structure, rather than human impact, proved to be an important agent for environmental filtering of traits, causing divergent functional trait values across forested and non-forested environments. Our results illustrate the importance of considering various elements of land use when studying its impact on

Biodiversity and the exotic species threat

Science.gov (United States)

Peter S. White

1998-01-01

Exotic species invasions, called by one conservation biologist the "least reversible" of all human impacts, cause harm to economies (e.g., fisheries, wildlife populations, tourism), the environment (e.g., in the form of broadcast of pesticides and herbicides), human health and wellbeing (e.g., allergic responses and the increase in fire severity in some...

Parent tree distance-dependent recruitment limitation of native and exotic invasive seedlings in urban forests

NARCIS (Netherlands)

Martínez-García, L.B.; Pietrangelo, O.; Antunes, P.M.

2016-01-01

Urban forests are more vulnerable to exotic species invasions than natural forests and are often a pathway for exotic invasions into natural areas. Investigating the mechanisms responsible for species coexistence in urban ecosystems is important to prevent forest invasions and conserve native

Modeling the effects of tree species and incubation temperature on soil's extracellular enzyme activity in 78-year-old tree plantations

Science.gov (United States)

Zhou, Xiaoqi; Wang, Shen S. J.; Chen, Chengrong

2017-12-01

Forest plantations have been widely used as an effective measure for increasing soil carbon (C), and nitrogen (N) stocks and soil enzyme activities play a key role in soil C and N losses during decomposition of soil organic matter. However, few studies have been carried out to elucidate the mechanisms behind the differences in soil C and N cycling by different tree species in response to climate warming. Here, we measured the responses of soil's extracellular enzyme activity (EEA) to a gradient of temperatures using incubation methods in 78-year-old forest plantations with different tree species. Based on a soil enzyme kinetics model, we established a new statistical model to investigate the effects of temperature and tree species on soil EEA. In addition, we established a tree species-enzyme-C/N model to investigate how temperature and tree species influence soil C/N contents over time without considering plant C inputs. These extracellular enzymes included C acquisition enzymes (β-glucosidase, BG), N acquisition enzymes (N-acetylglucosaminidase, NAG; leucine aminopeptidase, LAP) and phosphorus acquisition enzymes (acid phosphatases). The results showed that incubation temperature and tree species significantly influenced all soil EEA and Eucalyptus had 1.01-2.86 times higher soil EEA than coniferous tree species. Modeling showed that Eucalyptus had larger soil C losses but had 0.99-2.38 times longer soil C residence time than the coniferous tree species over time. The differences in the residual soil C and N contents between Eucalyptus and coniferous tree species, as well as between slash pine (Pinus elliottii Engelm. var. elliottii) and hoop pine (Araucaria cunninghamii Ait.), increase with time. On the other hand, the modeling results help explain why exotic slash pine can grow faster, as it has 1.22-1.38 times longer residual soil N residence time for LAP, which mediate soil N cycling in the long term, than native coniferous tree species like hoop pine and

Changes in carbon pool and stand structure of a native subtropical mangrove forest after inter-planting with exotic species Sonneratia apetala.

Science.gov (United States)

Lu, Weizhi; Yang, Shengchang; Chen, Luzhen; Wang, Wenqing; Du, Xiaona; Wang, Canmou; Ma, Yan; Lin, Guangxuan; Lin, Guanghui

2014-01-01

In this study, we compared stand structure, biomass and soil carbon pools, and litterfall production between a mixed mangrove forest consisting of Aegiceras corniculatum inter-planted with the exotic Sonneratia apetala and a native monospecific forest dominated by A. corniculatum in the intertidal area of Zhanjiang, Guangdong Province, southeast China. The goal of this study was to test the hypothesis that inter-planting fast growing exotic mangrove S. apetala into subtropical native mangrove forests will significantly increase C sequestration. Although the tree heights and basal diameters of S. apetala were significantly higher than those of A. corniculatum, the density of the 12-year-old S. apetala trees in the mixed forest was much smaller than that of A. corniculatum in the monospecific forest. In contrast to several previous studies on S. apetala forests planted directly on mangrove-free mudflats, the mixed mangrove forest showed no significant difference in either standing biomass or soil carbon pools from the native monospecific mangrove forest (p = 0.294 and 0.073, respectively) twelve years after inter-planting with S. apetala. Moreover, carbon cycling was likely speeded up after inter-planting S. apetala due to higher litterfall input and lower C/N ratio. Thus, inter-planting fast-growing S. apetala into native mangrove forest is not an effective way to increase carbon sequestration in this subtropical mangrove forest. Given that exotic plant species may exert negative impact on native mangrove species and related epifauna, this fast-growing mangrove species is not suitable for mangrove plantation projects aiming mainly at enhancing carbon sequestration.

Multiple-purpose trees for pastoral farming in New Zealand: with emphasis on tree legumes. [Lucerne Tree: Medick Tree

Energy Technology Data Exchange (ETDEWEB)

Davies, D J.G.; Macfarlane, R P

1979-01-01

The potential for soil conservation and agroforestry of several native and exotic legumes is discussed. Flowering period, chemical composition of leaves/pods, hardiness to frost and drought, timber value, forage potential for livestock and bees, ornamental value and other products are tabulated with information on up to 38 species. Two low-growing species that have proved useful for slope stabilization as well as forage are tree lucerne (Cytisus palmensis) and tree medick (Medicago arborea), the latter being shrubby and more suitable for cold districts. Gleditsia triacanthos is recommended as a shade and fodder tree for farm pasture.

Modeling the effects of tree species and incubation temperature on soil's extracellular enzyme activity in 78-year-old tree plantations

Directory of Open Access Journals (Sweden)

X. Zhou

2017-12-01

Full Text Available Forest plantations have been widely used as an effective measure for increasing soil carbon (C, and nitrogen (N stocks and soil enzyme activities play a key role in soil C and N losses during decomposition of soil organic matter. However, few studies have been carried out to elucidate the mechanisms behind the differences in soil C and N cycling by different tree species in response to climate warming. Here, we measured the responses of soil's extracellular enzyme activity (EEA to a gradient of temperatures using incubation methods in 78-year-old forest plantations with different tree species. Based on a soil enzyme kinetics model, we established a new statistical model to investigate the effects of temperature and tree species on soil EEA. In addition, we established a tree species–enzyme–C∕N model to investigate how temperature and tree species influence soil C∕N contents over time without considering plant C inputs. These extracellular enzymes included C acquisition enzymes (β-glucosidase, BG, N acquisition enzymes (N-acetylglucosaminidase, NAG; leucine aminopeptidase, LAP and phosphorus acquisition enzymes (acid phosphatases. The results showed that incubation temperature and tree species significantly influenced all soil EEA and Eucalyptus had 1.01–2.86 times higher soil EEA than coniferous tree species. Modeling showed that Eucalyptus had larger soil C losses but had 0.99–2.38 times longer soil C residence time than the coniferous tree species over time. The differences in the residual soil C and N contents between Eucalyptus and coniferous tree species, as well as between slash pine (Pinus elliottii Engelm. var. elliottii and hoop pine (Araucaria cunninghamii Ait., increase with time. On the other hand, the modeling results help explain why exotic slash pine can grow faster, as it has 1.22–1.38 times longer residual soil N residence time for LAP, which mediate soil N cycling in the long term, than native

Potential for nest site competition between native and exotic tree squirrels

Science.gov (United States)

Andrew J. Edelman; John L. Koprowski; Sadie R. Bertelsen

2009-01-01

In communities where strong interspecific competition between native species is lacking, exotic and native species often exhibit intense resource competition resulting in decline of native populations. We examined the potential for interspecific competition for nest sites between co-occurring native Mt. Graham red squirrels (Tamiasciurus hudsonicus grahamensis...

Impacts of exotic forest pathogens on Mediterranean ecosystems: Four case studies

Science.gov (United States)

Matteo Garbelotto; Marco Pautasso

2011-01-01

Mediterranean ecosystems are hotspots of biodiversity. Because of a coincidence of high species richness and human presence, Mediterranean biodiversity is particularly threatened by processes such as habitat degradation, fragmentation and loss, pollution, climate change and introduction of invasive species. Invasive tree pathogens are among the problematic exotic...

Use of exotic species in afforestation and facilitation for the establishment of biological invasion

Directory of Open Access Journals (Sweden)

Juliano Ricardo Fabricante

2017-02-01

Full Text Available This study aimed to inventory the species used in landscaping the Campus of Agricultural Sciences of the Federal University of Paraíba, Areia, PB, Brazil and to rank them according to their origin and their invasive potential. Through walks throughout the study area (active search, we cataloged all the species used in local afforestation and classified them as native or exotic. Exotic plants were also classified as to their invasive potential. Altogether, we identified 76 species belonging to 67 genera and 25 families. Of these, only 26 species were native. The results of this study are worrisome because of the large number of exotic species used for planting at the study site (50 species, including known aggressive species: Artocarpus heterophyllus Lam., Azadirachta indica A. Juss. and Leucaena leucocephala (Lam. de Wit.

Trees and the City: Diversity and Composition along a Neotropical Gradient of Urbanization

Directory of Open Access Journals (Sweden)

Rubén Ortega-Álvarez

2011-01-01

Full Text Available In this study we assessed tree species richness, density, and composition patterns along a gradient of urbanization of a megacity. Our results show that total, native, and exotic tree densities were highest in green areas where larger spaces are considered for greening purposes. Conversely, total, native, and exotic tree species richness were highest in land uses with intermediate levels of urban development (residential, residential-commercial areas. Not finding highest tree species richness in less developed urban areas suggests that cultural factors may shape the array of species that are planted within cities. Supporting this, tree composition analyses showed that green areas are comprised of different tree species when compared to the rest of the studied urban land uses. Thus, our results suggest that, to increase the ecological quality of cities, residents and managers should be encouraged to select a greater variety of trees to promote heterogeneous green areas.

A MULTIVARIATE APPROACH TO ANALYSE NATIVE FOREST TREE SPECIE SEEDS

Directory of Open Access Journals (Sweden)

Alessandro Dal Col Lúcio

2006-03-01

Full Text Available This work grouped, by species, the most similar seed tree, using the variables observed in exotic forest species of theBrazilian flora of seeds collected in the Forest Research and Soil Conservation Center of Santa Maria, Rio Grande do Sul, analyzedfrom January, 1997, to march, 2003. For the cluster analysis, all the species that possessed four or more analyses per lot wereanalyzed by the hierarchical Clustering method, of the standardized Euclidian medium distance, being also a principal componentanalysis technique for reducing the number of variables. The species Callistemon speciosus, Cassia fistula, Eucalyptus grandis,Eucalyptus robusta, Eucalyptus saligna, Eucalyptus tereticornis, Delonix regia, Jacaranda mimosaefolia e Pinus elliottii presentedmore than four analyses per lot, in which the third and fourth main components explained 80% of the total variation. The clusteranalysis was efficient in the separation of the groups of all tested species, as well as the method of the main components.

Resource diversity and provenance underpin spatial patterns in functional diversity across native and exotic species.

Science.gov (United States)

Méndez, Verónica; Wood, Jamie R; Butler, Simon J

2018-05-01

Functional diversity metrics are increasingly used to augment or replace taxonomic diversity metrics to deliver more mechanistic insights into community structure and function. Metrics used to describe landscape structure and characteristics share many of the same limitations as taxonomy-based metrics, particularly their reliance on anthropogenically defined typologies with little consideration of structure, management, or function. However, the development of alternative metrics to describe landscape characteristics has been limited. Here, we extend the functional diversity framework to characterize landscapes based on the diversity of resources available across habitats present. We then examine the influence of resource diversity and provenance on the functional diversities of native and exotic avian communities in New Zealand. Invasive species are increasingly prevalent and considered a global threat to ecosystem function, but the characteristics of and interactions between sympatric native and exotic communities remain unresolved. Understanding their comparative responses to environmental change and the mechanisms underpinning them is of growing importance in predicting community dynamics and changing ecosystem function. We use (i) matrices of resource use (species) and resource availability (habitats) and (ii) occurrence data for 62 native and 25 exotic species and 19 native and 13 exotic habitats in 2015 10 × 10 km quadrats to examine the relationship between native and exotic avian and landscape functional diversity. The numbers of species in, and functional diversities of, native and exotic communities were positively related. Each community displayed evidence of environmental filtering, but it was significantly stronger for exotic species. Less environmental filtering occurred in landscapes providing a more diverse combination of resources, with resource provenance also an influential factor. Landscape functional diversity explained a greater

Herbivory and dominance shifts among exotic and congeneric native plant species during plant community establishment

DEFF Research Database (Denmark)

Engelkes, Tim; Meisner, Annelein; Morriën, Elly

2016-01-01

in a riparian ecosystem during early establishment of invaded communities. We planted ten plant communities each consisting of three individuals of each of six exotic plant species as well as six phylogenetically related natives. Exotic plant species were selected based on a rapid recent increase in regional...... abundance, the presence of a congeneric native species, and their co-occurrence in the riparian ecosystem. All plant communities were covered by tents with insect mesh. Five tents were open on the leeward side to allow herbivory. The other five tents were completely closed in order to exclude insects...... and vertebrates. Herbivory reduced aboveground biomass by half and influenced which of the plant species dominated the establishing communities. Exposure to herbivory did not reduce the total biomass of natives more than that of exotics, so aboveground herbivory did not selectively enhance exotics during...

Are mangroves in the tropical Atlantic ripe for invasion? Exotic mangrove trees in the forests of South Florida

Science.gov (United States)

Fourqurean, James W.; Smith, Thomas J.; Possley, Jennifer; Collins, Timothy M.; Lee, David; Namoff, Sandra

2010-01-01

Two species of mangrove trees of Indo-Pacific origin have naturalized in tropical Atlantic mangrove forests in South Florida after they were planted and nurtured in botanic gardens. Two Bruguiera gymnorrhiza trees that were planted in the intertidal zone in 1940 have given rise to a population of at least 86 trees growing interspersed with native mangrove species Rhizophora mangle, Avicennia germinans and Laguncularia racemosa along 100 m of shoreline; the population is expanding at a rate of 5.6% year−1. Molecular genetic analyses confirm very low genetic diversity, as expected from a population founded by two individuals. The maximum number of alleles at any locus was three, and we measured reduced heterozygosity compared to native-range populations. Lumnitzera racemosa was introduced multiple times during the 1960s and 1970s, it has spread rapidly into a forest composed of native R. mangle, A. germinans, Laguncularia racemosa and Conocarpus erectus and now occupies 60,500 m2 of mangrove forest with stem densities of 24,735 ha−1. We estimate the population growth rate of Lumnitzera racemosa to be between 17 and 23% year−1. Populations of both species of naturalized mangroves are dominated by young individuals. Given the long life and water-dispersed nature of propagules of the two exotic species, it is likely that they have spread beyond our survey area. We argue that the species-depauperate nature of tropical Atlantic mangrove forests and close taxonomic relatives in the more species-rich Indo-Pacific region result in the susceptibility of tropical Atlantic mangrove forests to invasion by Indo-Pacific mangrove species.

Regional distribution of native and exotic species in levees of the lower delta of the Paraná river - DOI: 10.4025/actascibiolsci.v30i4.5869

Directory of Open Access Journals (Sweden)

Pablo Aceñolaza

2008-11-01

Full Text Available The distribution and abundance of exotic and native species in levee neo-ecosystems were analyzed. No invasive species were found in unit A; their absence could be explained by the fluvial action of the Paraná river, extraordinary flood episodes and anthropic disturbances. Invasive species associated with the tidal regimen of the de la Plata river were present in units B and C, particularly Chinese privet (L. sinense, green ash (F. pennsylvanica, honey locust (G. triacanthos, Japanese honeysuckle (L. Japonica, blackberry ( Rubus spp., box elder (A. Negundo and glossy privet (L. Lucidum.Native species showed low recovery values, both at a regional level and within each unit, with the exception of A. The neo-ecosystems with the greater degree of abandonment of units B and C exhibited dominance of exotic tree species and, to a lesser extent, recovery of native species of the original gallery forest (seibo, Erythrina crista galli; laurel, Nectandra falcifolia; canelón, Rapanea spp. and arrayán, Blepharocalyx tweediei.

FUEL CONDITIONS ASSOCIATED WITH NATIVE AND EXOTIC GRASSES IN A SUBTROPICAL DRY FOREST IN PUERTO RICO

Science.gov (United States)

Jarrod M. Thaxton; Skip J. Van Bloem; Stefanie Whitmire

2012-01-01

Exotic grasses capable of increasing frequency and intensity of anthropogenic fire have invaded subtropical and tropical dry forests worldwide. Since many dry forest trees are susceptible to fire, this can result in decline of native species and loss of forest cover. While the contribution of exotic grasses to altered fire regimes has been well documented, the role of...

Introduced, Captive, Caged and Escaped Exotic and Native Bird Species in the Littoral Area of Lebanon

International Nuclear Information System (INIS)

Ramadan -Jradi, G.; Ramadan -Jradi, M.

2012-01-01

Some introduced exotic bird species may cause damages to the ecosystem they are introduced to; others may have no effect or can be beneficial to humans and ecosystems.Whatever the case is, the exotic bird species remain an issue in Lebanon, especially that they are not given the appropriate priority at the national level. With the recent intentional or accidental introduction of exotic species,the problem is increasing and therefore necessitating comprehensive evaluation of the status and origin of these species in Lebanon.Since many of the introduced species are escapes from cages, it was necessary to also evaluate both status and origin of all caged birds in order to see whether they are introduced or native to the country. (author)

EXOTIC SPECIES OF SOCOTRA ISLAND, YEMEN: A FIRST CONTRIBUTION

Directory of Open Access Journals (Sweden)

R.K. SOMASHEKAR

2010-04-01

Full Text Available A first inventory of the exotic species of Socotra has been compiled on the basis of the published literature and original distribution data collected by field surveys from 2006 to 2008. A strictly geographical and conservative approach was adopted including only cultivated species and those with a native range separated from Socotra territory. The extracted aliens (87 taxa, 68 genera, 40 family represent approximately 9% of the total flora of the region (850 taxa. Most were introduced in the past 10 to 20 years. Agricultural cultivated or crop species dominated with 38 species (43.7%, fruit followed by basing 14 species (16.1% and ruder or ornamental species (35 species, 40.2%.

Competitive interactions between native and invasive exotic plant species are altered under elevated carbon dioxide.

Science.gov (United States)

Manea, Anthony; Leishman, Michelle R

2011-03-01

We hypothesized that the greater competitive ability of invasive exotic plants relative to native plants would increase under elevated CO(2) because they typically have traits that confer the ability for fast growth when resources are not limiting and thus are likely to be more responsive to elevated CO(2). A series of competition experiments under ambient and elevated CO(2) glasshouse conditions were conducted to determine an index of relative competition intensity for 14 native-invasive exotic species-pairs. Traits including specific leaf area, leaf mass ratio, leaf area ratio, relative growth rate, net assimilation rate and root weight ratio were measured. Competitive rankings within species-pairs were not affected by CO(2) concentration: invasive exotic species were more competitive in 9 of the 14 species-pairs and native species were more competitive in the remaining 5 species-pairs, regardless of CO(2) concentration. However, there was a significant interaction between plant type and CO(2) treatment due to reduced competitive response of native species under elevated compared with ambient CO(2) conditions. Native species had significantly lower specific leaf area and leaf area ratio under elevated compared with ambient CO(2). We also compared traits of more-competitive with less-competitive species, regardless of plant type, under both CO(2) treatments. More-competitive species had smaller leaf weight ratio and leaf area ratio, and larger relative growth rate and net assimilation rate under both ambient and elevated CO(2) conditions. These results suggest that growth and allocation traits can be useful predictors of the outcome of competitive interactions under both ambient and elevated CO(2) conditions. Under predicted future atmospheric CO(2) conditions, competitive rankings among species may not change substantially, but the relative success of invasive exotic species may be increased. Thus, under future atmospheric CO(2) conditions, the ecological and

Reciprocal effects of litter from exotic and congeneric native plant species via soil nutrients

NARCIS (Netherlands)

Meisner, A.; De Boer, W.; Cornelissen, J.H.C.; Van der Putten, W.H.

2012-01-01

Invasive exotic plant species are often expected to benefit exclusively from legacy effects of their litter inputs on soil processes and nutrient availability. However, there are relatively few experimental tests determining how litter of exotic plants affects their own growth conditions compared to

Tree-growth analyses to estimate tree species' drought tolerance.

Science.gov (United States)

Eilmann, Britta; Rigling, Andreas

2012-02-01

Climate change is challenging forestry management and practices. Among other things, tree species with the ability to cope with more extreme climate conditions have to be identified. However, while environmental factors may severely limit tree growth or even cause tree death, assessing a tree species' potential for surviving future aggravated environmental conditions is rather demanding. The aim of this study was to find a tree-ring-based method suitable for identifying very drought-tolerant species, particularly potential substitute species for Scots pine (Pinus sylvestris L.) in Valais. In this inner-Alpine valley, Scots pine used to be the dominating species for dry forests, but today it suffers from high drought-induced mortality. We investigate the growth response of two native tree species, Scots pine and European larch (Larix decidua Mill.), and two non-native species, black pine (Pinus nigra Arnold) and Douglas fir (Pseudotsuga menziesii Mirb. var. menziesii), to drought. This involved analysing how the radial increment of these species responded to increasing water shortage (abandonment of irrigation) and to increasingly frequent drought years. Black pine and Douglas fir are able to cope with drought better than Scots pine and larch, as they show relatively high radial growth even after irrigation has been stopped and a plastic growth response to drought years. European larch does not seem to be able to cope with these dry conditions as it lacks the ability to recover from drought years. The analysis of trees' short-term response to extreme climate events seems to be the most promising and suitable method for detecting how tolerant a tree species is towards drought. However, combining all the methods used in this study provides a complete picture of how water shortage could limit species.

Housing is positively associated with invasive exotic plant species richness in New England, USA.

Science.gov (United States)

Gavier-Pizarro, Gregorio I; Radeloff, Volker C; Stewart, Susan I; Huebner, Cynthia D; Keuler, Nicholas S

2010-10-01

Understanding the factors related to invasive exotic species distributions at broad spatial scales has important theoretical and management implications, because biological invasions are detrimental to many ecosystem functions and processes. Housing development facilitates invasions by disturbing land cover, introducing nonnative landscaping plants, and facilitating dispersal of propagules along roads. To evaluate relationships between housing and the distribution of invasive exotic plants, we asked (1) how strongly is housing associated with the spatial distribution of invasive exotic plants compared to other anthropogenic and environmental factors; (2) what type of housing pattern is related to the richness of invasive exotic plants; and (3) do invasive plants represent ecological traits associated with specific housing patterns? Using two types of regression analysis (best subset analysis and hierarchical partitioning analysis), we found that invasive exotic plant richness was equally or more strongly related to housing variables than to other human (e.g., mean income and roads) and environmental (e.g., topography and forest cover) variables at the county level across New England. Richness of invasive exotic plants was positively related to area of wildland-urban interface (WUI), low-density residential areas, change in number of housing units between 1940 and 2000, mean income, plant productivity (NDVI), and altitudinal range and rainfall; it was negatively related to forest area and connectivity. Plant life history traits were not strongly related to housing patterns. We expect the number of invasive exotic plants to increase as a result of future housing growth and suggest that housing development be considered a primary factor in plans to manage and monitor invasive exotic plant species.

Southwestern Avian Community Organization in Exotic Tamarix: Current Patterns and Future Needs

Science.gov (United States)

H. A. Walker

2006-01-01

Tamarisk (saltcedar: Tamarix), an invasive exotic tree native to the Eastern Hemisphere, is currently the dominant plant species in most southwestern riparian ecosystems at elevations below 1500 m. Tamarisk alters abiotic conditions and the floral composition of native southwestern riparian ecosystems and, in turn, affects native southwestern animal communities....

[Exploration on an overview of history (from Chunqiu to Ming and Qing Dynasties) and species of Chinese exotic traditional medicine].

Science.gov (United States)

Jia, Min-Ru; Wang, Tian-Tian; Lu, Xiao-Lin; Ma, Yu-Ying

2017-05-01

This paper collected and analyzed literatures about starting of traditional medicine and trading of different medicine from Chunqiu Zhanguo to Ming and Qing Dynasties, in order to preliminarily explore on an overview of specie of chinese exotic traditional medicine and trade of different country in different dynasty（from Chunqiu to Ming and Qing Dynasties）, as well as the amount of exotic medicine over two thousand years. (remove repeating and doubtful species), find peculiarity of exotic medicine, sreen species that used to develop the Silk Route and establish quality standards.Finally, We get conclusions are as follows. First, primary,.prosperous and declining stages of development of exotic traditional medicine are Qin and Han, Song-Jin-Yuan, Ming and Qing Dynasties, respectively. Second, according to literature, the stage that has the most species of exotic medicine is song dynasty,approximately have 300. Removing repeating and doubtful species, the believable species are approximate 230 to 250. Meanwhile, the unknown species are approximate 30, which may be different name of one medicine or processed goods, now these medicines are named as "doubtful species". Third, the medicinal parts of exotic medicine are different from Chinese medicine of Han nation. The number of Resin, fruits and seeds kind are more than root and rhizomes kind,mineral medicines are more than animal. Fourth, the major producing area of exotic medicine is some countries and territories related to the Silk Route in the history. Ultimately, this paper preliminarily figure out basic information of exotic medicine of different dynasty in China,that provide reference for learning study and decision of industrial development. Copyright© by the Chinese Pharmaceutical Association.

Status of exotic woody species in big cypress national preserve. Technical report

Energy Technology Data Exchange (ETDEWEB)

Gunderson, L.H.

1983-12-01

The current status of exotic woody plants in Big Cypress National Preserve is documented. A map of the distribution of principal pest species, Melaleuca quinquenervia, Schinus terebinthifolius, and Casuarina sp., is presented. Prognoses of population increases of these problem species are determined utilizing the current distributions and assessing environmental conditions. Some potential problem species are also identified.

Non-random co-occurrence of native and exotic plant species in Mediterranean grasslands

Science.gov (United States)

de Miguel, José M.; Martín-Forés, Irene; Acosta-Gallo, Belén; del Pozo, Alejandro; Ovalle, Carlos; Sánchez-Jardón, Laura; Castro, Isabel; Casado, Miguel A.

2016-11-01

Invasion by exotic species in Mediterranean grasslands has determined assembly patterns of native and introduced species, knowledge of which provides information on the ecological processes underlying these novel communities. We considered grasslands from Spain and Chile. For each country we considered the whole grassland community and we split species into two subsets: in Chile, species were classified as natives or colonizers (i.e. exotics); in Spain, species were classified as exclusives (present in Spain but not in Chile) or colonizers (Spanish natives and exotics into Chile). We used null models and co-occurrence indices calculated in each country for each one of 15 sites distributed along a precipitation gradient and subjected to similar silvopastoral exploitation. We compared values of species co-occurrence between countries and between species subsets (natives/colonizers in Chile; exclusives/colonizers in Spain) within each country and we characterised them according to climatic variables. We hypothesized that: a) the different coexistence time of the species in both regions should give rise to communities presenting a spatial pattern further from random in Spain than in Chile, b) the co-occurrence patterns in the grasslands are affected by mesoclimatic factors in both regions. The patterns of co-occurrence are similar in Spain and Chile, mostly showing a spatial pattern more segregated than expected by random. The colonizer species are more segregated in Spain than in Chile, possibly determined by the longer residence time of the species in the source area than in the invaded one. The segregation of species in Chile is related to water availability, being species less segregated in habitat with greater water deficit; in Spain no relationship with climatic variables was found. After an invasion process, our results suggest that the possible process of alteration of the original Chilean communities has not prevented the assembly between the native and

Exotic species as models to understand biocultural adaptation: Challenges to mainstream views of human-nature relations.

Directory of Open Access Journals (Sweden)

Aline Dourado Sena Gama

Full Text Available A central argument in the research on traditional knowledge, which persists in the scientific literature, is that the entrance of exotic plants in local medical systems is directly associated with acculturation. However, this logic has put an end for a long period to efforts to understand why such species have so successfully entered socio-ecological systems or even their real role in such systems. This study provides evidence that (1 in some socio-environmental contexts, exotic medicinal species usually confer greater adaptive advantages to local populations, and (2 despite their general importance, exotic species only excel in medical systems when cost-benefit ratio is favorable to them. Thus, in order to avoid the loss of knowledge about native plants and to ensure biocultural conservation, it is necessary to create strategies to amplify the advantages of these species.

THE ALIEN STREET TREES OF FORTALEZA (NE BRAZIL: QUALITATIVE OBSERVATIONS AND THE INVENTORY OF TWO DISTRICTS

Directory of Open Access Journals (Sweden)

Marcelo Freire Moro

2011-01-01

Full Text Available Public tree planting is important for cities. It produces shadow, brings well-being for humans, and supports the urban fauna. But the cultivation of exotic plants can also be responsible for dissemination of invasive species. This paper aims to evaluate public tree planting in Fortaleza, Ceará state, in northeastern Brazil. From 2005 to 2009, qualitative observations on tree composition in the city were made. In 2006, a detailed inventory of all public trees was carried out in two districts of Fortaleza. Jointly, 2075 individuals grew here. Most of the tree species planted in Fortaleza are aliens, some are even invasive. The massive use of exotic plants in Fortaleza has negative consequences for the environmental education. People do not know the regional native trees, and thus are not concerned about the local biodiversity conservation. In spite of the huge amounts of native species available for ornamental purposes in the Brazilian flora, the street trees of Fortaleza are overwhelmingly aliens.

Effects of an exotic prey species on a native specialist: example of the snail kite

Science.gov (United States)

Cattau, Christopher E.; Martin, J.; Kitchens, Wiley M.

2010-01-01

Despite acknowledging that exotic species can exhibit tremendous influence over native populations, few case studies have clearly demonstrated the effects of exotic prey species on native predators. We examined the effects of the recently introduced island apple snail (Pomacea insularum) on the foraging behavior and energetics of the endangered snail kite (Rostrhamus sociabilis plumbeus) in Florida. We conducted time-activity budgets: (i) on kites foraging for native Florida apple snails (Pomacea paludosa) in major wetland units within the kites' range that had not been invaded by the exotic island apple snail and (ii) on kites foraging for exotic apple snails in Lake Tohopekaliga, the only major wetland utilized by the snail kite that had suffered a serious invasion of P. insularum. When foraging for P. insularum, snail kites dropped a greater proportion of snails, and they experienced increased handling times and decreased consumption rates; however, kites foraging for P. insularum also spent a smaller proportion of the day in flight. Estimates of net daily energy balances between kites feeding on P. insularum versus P. paludosa were comparable for adults, but juveniles experienced energetic deficiencies when feeding on the exotic snail. Due to this discrepancy, we hypothesize that wetlands invaded by P. insularum, such as Lake Tohopekaliga, may function as ecological traps for the snail kite in Florida by attracting breeding adults but simultaneously depressing juvenile survival. This study highlights the conservation implications and importance of elucidating the effects that exotic species have on native specialists, especially those that are endangered, because subtle influences on behavior may have significant population consequences.

Farmers' tree planting and access to germplasm in the southern ...

African Journals Online (AJOL)

Most farmers in the southern highlands of Tanzania plant significant numbers of trees and tree planting is an integral part of farming systems. Main purposes of tree planting are fuelwood, timber in a broad sense, and fruit production. People want to plant well-known species, which in most cases are exotics, and many ...

Reconciliation with non-binary species trees.

Science.gov (United States)

Vernot, Benjamin; Stolzer, Maureen; Goldman, Aiton; Durand, Dannie

2008-10-01

Reconciliation extracts information from the topological incongruence between gene and species trees to infer duplications and losses in the history of a gene family. The inferred duplication-loss histories provide valuable information for a broad range of biological applications, including ortholog identification, estimating gene duplication times, and rooting and correcting gene trees. While reconciliation for binary trees is a tractable and well studied problem, there are no algorithms for reconciliation with non-binary species trees. Yet a striking proportion of species trees are non-binary. For example, 64% of branch points in the NCBI taxonomy have three or more children. When applied to non-binary species trees, current algorithms overestimate the number of duplications because they cannot distinguish between duplication and incomplete lineage sorting. We present the first algorithms for reconciling binary gene trees with non-binary species trees under a duplication-loss parsimony model. Our algorithms utilize an efficient mapping from gene to species trees to infer the minimum number of duplications in O(|V(G) | x (k(S) + h(S))) time, where |V(G)| is the number of nodes in the gene tree, h(S) is the height of the species tree and k(S) is the size of its largest polytomy. We present a dynamic programming algorithm which also minimizes the total number of losses. Although this algorithm is exponential in the size of the largest polytomy, it performs well in practice for polytomies with outdegree of 12 or less. We also present a heuristic which estimates the minimal number of losses in polynomial time. In empirical tests, this algorithm finds an optimal loss history 99% of the time. Our algorithms have been implemented in NOTUNG, a robust, production quality, tree-fitting program, which provides a graphical user interface for exploratory analysis and also supports automated, high-throughput analysis of large data sets.

Ectomycorrhizal fungal communities of native and non-native Pinus and Quercus species in a common garden of 35-year-old trees.

Science.gov (United States)

Trocha, Lidia K; Kałucka, Izabela; Stasińska, Małgorzata; Nowak, Witold; Dabert, Mirosława; Leski, Tomasz; Rudawska, Maria; Oleksyn, Jacek

2012-02-01

Non-native tree species have been widely planted or have become naturalized in most forested landscapes. It is not clear if native trees species collectively differ in ectomycorrhizal fungal (EMF) diversity and communities from that of non-native tree species. Alternatively, EMF species community similarity may be more determined by host plant phylogeny than by whether the plant is native or non-native. We examined these unknowns by comparing two genera, native and non-native Quercus robur and Quercus rubra and native and non-native Pinus sylvestris and Pinus nigra in a 35-year-old common garden in Poland. Using molecular and morphological approaches, we identified EMF species from ectomycorrhizal root tips and sporocarps collected in the monoculture tree plots. A total of 69 EMF species were found, with 38 species collected only as sporocarps, 18 only as ectomycorrhizas, and 13 both as ectomycorrhizas and sporocarps. The EMF species observed were all native and commonly associated with a Holarctic range in distribution. We found that native Q. robur had ca. 120% higher total EMF species richness than the non-native Q. rubra, while native P. sylvestris had ca. 25% lower total EMF species richness than non-native P. nigra. Thus, across genera, there was no evidence that native species have higher EMF species diversity than exotic species. In addition, we found a higher similarity in EMF communities between the two Pinus species than between the two Quercus species. These results support the naturalization of non-native trees by means of mutualistic associations with cosmopolitan and novel fungi.

Apparent competition and native consumers exacerbate the strong competitive effect of an exotic plant species.

Science.gov (United States)

Orrock, John L; Dutra, Humberto P; Marquis, Robert J; Barber, Nicholas

2015-04-01

Direct and indirect effects can play a key role in invasions, but experiments evaluating both are rare. We examined the roles of direct competition and apparent competition by exotic Amur honeysuckle (Lonicera maackii) by manipulating (1) L. maackii vegetation, (2) presence of L. maackii fruits, and (3) access to plants by small mammals and deer. Direct competition with L. maackii reduced the abundance and richness of native and exotic species, and native consumers significantly reduced the abundance and richness of native species. Although effects of direct competition and consumption were more pervasive, richness of native plants was also reduced through apparent competition, as small-mammal consumers reduced richness only when L. maackii fruits were present. Our experiment reveals the multiple, interactive pathways that affect the success and impact of an invasive exotic plant: exotic plants may directly benefit from reduced attack by native consumers, may directly exert strong competitive effects on native plants, and may also benefit from apparent competition.

Correlated factors in amphibian decline: Exotic species and habitat change in western Washington

Science.gov (United States)

Adams, Michael J.

1999-01-01

Amphibian declines may frequently be associated with multiple, correlated factors. In western North America, exotic species and hydrological changes are often correlated and are considered 2 of the greatest threats to freshwater systems. Bullfrog (Rana catesbeiana) introductions are frequently cited as a threat to lentic-breeding anurans native to western North America and are a suspected factor in the decline of red-legged frogs (Rana aurora) in California. Introduced fish and habitat change are cited less frequently but are equally viable hypotheses. I examined the relation among introduced species, habitat, and the distribution and abundance of red-legged frogs in western Washington. Red-legged frog occurrence in the Puget Lowlands was more closely associated with habitat structure and the presence of exotic fish than with the presence of bull-frogs. The spread of exotics is correlated with a shift toward greater permanence in wetland habitats regionally. Conservation of more ephemeral wetland habitats may have direct benefits for some native amphibians and may also reduce the threat of exotic fish and bullfrogs, both of which were associated with permanent wetlands. Research and conservation efforts for lowland anurans in the West should emphasize the complexities of multiple contributing factors to amphibian losses.

Use of flowering trees by birds in Savanna in Nigeria during the dry ...

African Journals Online (AJOL)

Birds preferentially visited flowers primarily to lap nectar. Cases of opportunistic insectivory ... The importance of exotic trees as a nectar substitute for nectarivorous birds in residential areas represent a critical ecosystem service of great value to humanity (esthetic, ethical and economical). In this research, exotic species ...

Seeds of Puerto Rican Trees and Shrubs: Second Installment

Science.gov (United States)

John K. Francis; Alberto Rodríguez

1993-01-01

Seed weights and germination information were obtained for 119 native Puerto Rican and naturalized exotic trees and shrubs. Fruit was collected from 34 of these species, and the weights were recorded. The data are presented in tables that list the species alphabetically by scientific names.

Tree-growth analyses to estimate tree species' drought tolerance

NARCIS (Netherlands)

Eilmann, B.; Rigling, A.

2012-01-01

Climate change is challenging forestry management and practices. Among other things, tree species with the ability to cope with more extreme climate conditions have to be identified. However, while environmental factors may severely limit tree growth or even cause tree death, assessing a tree

Reconciliation of Gene and Species Trees

Directory of Open Access Journals (Sweden)

L. Y. Rusin

2014-01-01

Full Text Available The first part of the paper briefly overviews the problem of gene and species trees reconciliation with the focus on defining and algorithmic construction of the evolutionary scenario. Basic ideas are discussed for the aspects of mapping definitions, costs of the mapping and evolutionary scenario, imposing time scales on a scenario, incorporating horizontal gene transfers, binarization and reconciliation of polytomous trees, and construction of species trees and scenarios. The review does not intend to cover the vast diversity of literature published on these subjects. Instead, the authors strived to overview the problem of the evolutionary scenario as a central concept in many areas of evolutionary research. The second part provides detailed mathematical proofs for the solutions of two problems: (i inferring a gene evolution along a species tree accounting for various types of evolutionary events and (ii trees reconciliation into a single species tree when only gene duplications and losses are allowed. All proposed algorithms have a cubic time complexity and are mathematically proved to find exact solutions. Solving algorithms for problem (ii can be naturally extended to incorporate horizontal transfers, other evolutionary events, and time scales on the species tree.

Identifying the rooted species tree from the distribution of unrooted gene trees under the coalescent.

Science.gov (United States)

Allman, Elizabeth S; Degnan, James H; Rhodes, John A

2011-06-01

Gene trees are evolutionary trees representing the ancestry of genes sampled from multiple populations. Species trees represent populations of individuals-each with many genes-splitting into new populations or species. The coalescent process, which models ancestry of gene copies within populations, is often used to model the probability distribution of gene trees given a fixed species tree. This multispecies coalescent model provides a framework for phylogeneticists to infer species trees from gene trees using maximum likelihood or Bayesian approaches. Because the coalescent models a branching process over time, all trees are typically assumed to be rooted in this setting. Often, however, gene trees inferred by traditional phylogenetic methods are unrooted. We investigate probabilities of unrooted gene trees under the multispecies coalescent model. We show that when there are four species with one gene sampled per species, the distribution of unrooted gene tree topologies identifies the unrooted species tree topology and some, but not all, information in the species tree edges (branch lengths). The location of the root on the species tree is not identifiable in this situation. However, for 5 or more species with one gene sampled per species, we show that the distribution of unrooted gene tree topologies identifies the rooted species tree topology and all its internal branch lengths. The length of any pendant branch leading to a leaf of the species tree is also identifiable for any species from which more than one gene is sampled.

Leaf litter breakdown rates and associated fauna of native and exotic trees used in Neotropical Riparia Reforestation; Tasas de perdida de masa de la hojarasca y fauna asociada en especies de arboles comunmente utilizados en la Reforestacion de Riberas Neotropicales

Energy Technology Data Exchange (ETDEWEB)

Gutierrez Isaza, Nataly; Blanco, Juan Felipe

2014-07-01

A signature of globalization is the prevalence of exotic trees along reforested urban and rural riparian zones in the neotropics, but little is known about the instream processing of its leaf litter. In this study, leaf litter breakdown rates were measured during 35 days using mesh bags within a reference headwater stream for seven exotic and three native tree species commonly used in urban and rural reforestation. Artocarpus altilis, Schefflera actinophylla and Terminalia catappa scored the highest mass loss rates (>85 %; mean life: t50 <15 d), while Cecropia sp. and Cespedesia macrophylla (mass loss =36 and 15 %; t50 =58 and 172 d, respectively) scored the lowest rates. However, a broad range of rates was observed among the ten species studied. The carbon to phosphorus ratio (c:p) and toughness of the leaf litter were the best predictors of breakdown rates. However, these leaf properties were not correlated with the very low values of macro invertebrates abundance and diversity, and the few morpho classified as shredders. Therefore physical rather than biological controls seem to best explain the observed variability of mass loss rates, and thus slow decomposing leaf litter species seems to provide a habitat rather than a food resource, particularly to collectors. This study suggests that riparian reforestation will propagate species-specific ecological influences on instream processes such as leaf litter processing depending on leaf quality properties, therefore ecosystem-wide influences should be considered for improving reforestation strategies. Future studies should test for differences in breakdown rates and colonization by macro invertebrates relative for leaf litter species origin (native vs. exotic).

Exotic annual Bromus invasions: comparisons among species and ecoregions in the western United States

Science.gov (United States)

Brooks, Matthew L.; Brown, Cynthia S.; Chambers, Jeanne C.; D'Antonio, Carla M.; Keeley, Jon E.; Belnap, Jayne

2016-01-01

Exotic annual Bromus species are widely recognized for their potential to invade, dominate, and alter the structure and function of ecosystems. In this chapter, we summarize the invasion potential, ecosystem threats, and management strategies for different Bromus species within each of five ecoregions of the western United States. We characterize invasion potential and threats in terms of ecosystem resistance to Bromus invasion and ecosystem resilience to disturbance with an emphasis on the importance of fi re regimes. We also explain how soil temperature and moisture regimes can be linked to patterns of resistance and resilience and provide a conceptual framework that can be used to evaluate the relative potential for invasion and ecological impact of the dominant exotic annual Bromus species in the western United States.

Are temperate canopy spiders tree-species specific?

Science.gov (United States)

Mupepele, Anne-Christine; Müller, Tobias; Dittrich, Marcus; Floren, Andreas

2014-01-01

Arboreal spiders in deciduous and coniferous trees were investigated on their distribution and diversity. Insecticidal knock-down was used to comprehensively sample spiders from 175 trees from 2001 to 2003 in the Białowieża forest and three remote forests in Poland. We identified 140 species from 9273 adult spiders. Spider communities were distinguished between deciduous and coniferous trees. The richest fauna was collected from Quercus where beta diversity was also highest. A tree-species-specific pattern was clearly observed for Alnus, Carpinus, Picea and Pinus trees and also for those tree species that were fogged in only four or three replicates, namely Betula and Populus. This hitherto unrecognised association was mainly due to the community composition of common species identified in a Dufrene-Legendre indicator species analysis. It was not caused by spatial or temporal autocorrelation. Explaining tree-species specificity for generalist predators like spiders is difficult and has to involve physical and ecological tree parameters like linkage with the abundance of prey species. However, neither did we find a consistent correlation of prey group abundances with spiders nor could differences in spider guild composition explain the observed pattern. Our results hint towards the importance of deterministic mechanisms structuring communities of generalist canopy spiders although the casual relationship is not yet understood.

Inferring species trees from incongruent multi-copy gene trees using the Robinson-Foulds distance

Science.gov (United States)

2013-01-01

Background Constructing species trees from multi-copy gene trees remains a challenging problem in phylogenetics. One difficulty is that the underlying genes can be incongruent due to evolutionary processes such as gene duplication and loss, deep coalescence, or lateral gene transfer. Gene tree estimation errors may further exacerbate the difficulties of species tree estimation. Results We present a new approach for inferring species trees from incongruent multi-copy gene trees that is based on a generalization of the Robinson-Foulds (RF) distance measure to multi-labeled trees (mul-trees). We prove that it is NP-hard to compute the RF distance between two mul-trees; however, it is easy to calculate this distance between a mul-tree and a singly-labeled species tree. Motivated by this, we formulate the RF problem for mul-trees (MulRF) as follows: Given a collection of multi-copy gene trees, find a singly-labeled species tree that minimizes the total RF distance from the input mul-trees. We develop and implement a fast SPR-based heuristic algorithm for the NP-hard MulRF problem. We compare the performance of the MulRF method (available at http://genome.cs.iastate.edu/CBL/MulRF/) with several gene tree parsimony approaches using gene tree simulations that incorporate gene tree error, gene duplications and losses, and/or lateral transfer. The MulRF method produces more accurate species trees than gene tree parsimony approaches. We also demonstrate that the MulRF method infers in minutes a credible plant species tree from a collection of nearly 2,000 gene trees. Conclusions Our new phylogenetic inference method, based on a generalized RF distance, makes it possible to quickly estimate species trees from large genomic data sets. Since the MulRF method, unlike gene tree parsimony, is based on a generic tree distance measure, it is appealing for analyses of genomic data sets, in which many processes such as deep coalescence, recombination, gene duplication and losses as

Vulnerability of oak-dominated forests in West Virginia to invasive exotic plants: temporal and spatial patterns of nine exotic species using herbarium records and land classification data

Science.gov (United States)

Cynthia D. Huebner

2003-01-01

Are oak-dominated forests immune to invasive exotic plants? Herbarium and land classification data were used to evaluate the extent of spread of nine invasive exotic plants and to relate their distributions to remotely-sensed land use types in West Virginia. Collector-defined habitats indicated that the most common habitat was roadsides, but seven of the nine species...

Tree structural and species diversities in Okwangwo Forest, Cross ...

African Journals Online (AJOL)

Tree species were grouped into abundance classes. A total of 125 tree species belonging to 36 families and 96 genera were recorded in the area with Margaleffs index of species richness of 2.2754. Most (99) of the tree species encountered were threatened/endangered, 23 species were rare with only 3 tree species ...

Adaptive consequences of human-mediated introgression for indigenous tree species: the case of a relict Pinus pinaster population.

Science.gov (United States)

Ramírez-Valiente, José Alberto; Robledo-Arnuncio, Juan José

2014-12-01

Human-induced gene movement via afforestation and restoration programs is a widespread phenomenon throughout the world. However, its effects on the genetic composition of native populations have received relatively little attention, particularly in forest trees. Here, we examine to what extent gene flow from allochthonous plantations of Pinus pinaster Aiton impacts offspring performance in a neighboring relict natural population and discuss the potential consequences for the long-term genetic composition of the latter. Specifically, we conducted a greenhouse experiment involving two contrasting watering treatments to test for differences in a set of functional traits and mortality rates between P. pinaster progenies from three different parental origins: (i) local native parents, (ii) exotic parents and (iii) intercrosses between local mothers and exotic fathers (intraspecific hybrids). Our results showed differences among crosses in cumulative mortality over time: seedlings of exotic parents exhibited the lowest mortality rates and seedlings of local origin the highest, while intraspecific hybrids exhibited an intermediate response. Linear regressions showed that seedlings with higher water-use efficiency (WUE, δ(13)C) were more likely to survive under drought stress, consistent with previous findings suggesting that WUE has an important role under dry conditions in this species. However, differences in mortality among crosses were only partially explained by WUE. Other non-measured traits and factors such as inbreeding depression in the relict population are more likely to explain the lower performance of native progenies. Overall, our results indicated that intraspecific hybrids and exotic individuals are more likely to survive under stressful conditions than local native individuals, at least during the first year of development. Since summer drought is the most important demographic and selective filter affecting tree establishment in Mediterranean ecosystems

Breeding bird use of and nesting success in exotic Russian olive in New Mexico

Science.gov (United States)

Scott H. Stoleson; Deborah M. Finch

2001-01-01

The exotic tree, Russian olive (Elaeagnus angustifolia), has invaded riparian zones throughout much of the western Unites States. Although promoted as a useful species for wildlife because of its abundant edible fruit, evidence for its value to breeding birds remains sparse. We compared relative rates of usage, nest success, and cowbird parasitism of birds breeding in...

An estimate of the number of tropical tree species

Science.gov (United States)

Slik, J. W. Ferry; Arroyo-Rodríguez, Víctor; Aiba, Shin-Ichiro; Alvarez-Loayza, Patricia; Alves, Luciana F.; Ashton, Peter; Balvanera, Patricia; Bastian, Meredith L.; Bellingham, Peter J.; van den Berg, Eduardo; Bernacci, Luis; da Conceição Bispo, Polyanna; Blanc, Lilian; Böhning-Gaese, Katrin; Boeckx, Pascal; Bongers, Frans; Boyle, Brad; Bradford, Matt; Brearley, Francis Q.; Breuer-Ndoundou Hockemba, Mireille; Bunyavejchewin, Sarayudh; Calderado Leal Matos, Darley; Castillo-Santiago, Miguel; Catharino, Eduardo L. M.; Chai, Shauna-Lee; Chen, Yukai; Colwell, Robert K.; Chazdon, Robin L.; Clark, Connie; Clark, David B.; Clark, Deborah A.; Culmsee, Heike; Damas, Kipiro; Dattaraja, Handanakere S.; Dauby, Gilles; Davidar, Priya; DeWalt, Saara J.; Doucet, Jean-Louis; Duque, Alvaro; Durigan, Giselda; Eichhorn, Karl A. O.; Eisenlohr, Pedro V.; Eler, Eduardo; Ewango, Corneille; Farwig, Nina; Feeley, Kenneth J.; Ferreira, Leandro; Field, Richard; de Oliveira Filho, Ary T.; Fletcher, Christine; Forshed, Olle; Franco, Geraldo; Fredriksson, Gabriella; Gillespie, Thomas; Gillet, Jean-François; Amarnath, Giriraj; Griffith, Daniel M.; Grogan, James; Gunatilleke, Nimal; Harris, David; Harrison, Rhett; Hector, Andy; Homeier, Jürgen; Imai, Nobuo; Itoh, Akira; Jansen, Patrick A.; Joly, Carlos A.; de Jong, Bernardus H. J.; Kartawinata, Kuswata; Kearsley, Elizabeth; Kelly, Daniel L.; Kenfack, David; Kessler, Michael; Kitayama, Kanehiro; Kooyman, Robert; Larney, Eileen; Laumonier, Yves; Laurance, Susan; Laurance, William F.; Lawes, Michael J.; do Amaral, Ieda Leao; Letcher, Susan G.; Lindsell, Jeremy; Lu, Xinghui; Mansor, Asyraf; Marjokorpi, Antti; Martin, Emanuel H.; Meilby, Henrik; Melo, Felipe P. L.; Metcalfe, Daniel J.; Medjibe, Vincent P.; Metzger, Jean Paul; Millet, Jerome; Mohandass, D.; Montero, Juan C.; de Morisson Valeriano, Márcio; Mugerwa, Badru; Nagamasu, Hidetoshi; Nilus, Reuben; Ochoa-Gaona, Susana; Onrizal; Page, Navendu; Parolin, Pia; Parren, Marc; Parthasarathy, Narayanaswamy; Paudel, Ekananda; Permana, Andrea; Piedade, Maria T. F.; Pitman, Nigel C. A.; Poorter, Lourens; Poulsen, Axel D.; Poulsen, John; Powers, Jennifer; Prasad, Rama C.; Puyravaud, Jean-Philippe; Razafimahaimodison, Jean-Claude; Reitsma, Jan; dos Santos, João Roberto; Roberto Spironello, Wilson; Romero-Saltos, Hugo; Rovero, Francesco; Rozak, Andes Hamuraby; Ruokolainen, Kalle; Rutishauser, Ervan; Saiter, Felipe; Saner, Philippe; Santos, Braulio A.; Santos, Fernanda; Sarker, Swapan K.; Satdichanh, Manichanh; Schmitt, Christine B.; Schöngart, Jochen; Schulze, Mark; Suganuma, Marcio S.; Sheil, Douglas; da Silva Pinheiro, Eduardo; Sist, Plinio; Stevart, Tariq; Sukumar, Raman; Sun, I.-Fang; Sunderland, Terry; Suresh, H. S.; Suzuki, Eizi; Tabarelli, Marcelo; Tang, Jangwei; Targhetta, Natália; Theilade, Ida; Thomas, Duncan W.; Tchouto, Peguy; Hurtado, Johanna; Valencia, Renato; van Valkenburg, Johan L. C. H.; Van Do, Tran; Vasquez, Rodolfo; Verbeeck, Hans; Adekunle, Victor; Vieira, Simone A.; Webb, Campbell O.; Whitfeld, Timothy; Wich, Serge A.; Williams, John; Wittmann, Florian; Wöll, Hannsjoerg; Yang, Xiaobo; Adou Yao, C. Yves; Yap, Sandra L.; Yoneda, Tsuyoshi; Zahawi, Rakan A.; Zakaria, Rahmad; Zang, Runguo; de Assis, Rafael L.; Garcia Luize, Bruno; Venticinque, Eduardo M.

2015-01-01

The high species richness of tropical forests has long been recognized, yet there remains substantial uncertainty regarding the actual number of tropical tree species. Using a pantropical tree inventory database from closed canopy forests, consisting of 657,630 trees belonging to 11,371 species, we use a fitted value of Fisher’s alpha and an approximate pantropical stem total to estimate the minimum number of tropical forest tree species to fall between ∼40,000 and ∼53,000, i.e., at the high end of previous estimates. Contrary to common assumption, the Indo-Pacific region was found to be as species-rich as the Neotropics, with both regions having a minimum of ∼19,000–25,000 tree species. Continental Africa is relatively depauperate with a minimum of ∼4,500–6,000 tree species. Very few species are shared among the African, American, and the Indo-Pacific regions. We provide a methodological framework for estimating species richness in trees that may help refine species richness estimates of tree-dependent taxa. PMID:26034279

STBase: one million species trees for comparative biology.

Science.gov (United States)

McMahon, Michelle M; Deepak, Akshay; Fernández-Baca, David; Boss, Darren; Sanderson, Michael J

2015-01-01

Comprehensively sampled phylogenetic trees provide the most compelling foundations for strong inferences in comparative evolutionary biology. Mismatches are common, however, between the taxa for which comparative data are available and the taxa sampled by published phylogenetic analyses. Moreover, many published phylogenies are gene trees, which cannot always be adapted immediately for species level comparisons because of discordance, gene duplication, and other confounding biological processes. A new database, STBase, lets comparative biologists quickly retrieve species level phylogenetic hypotheses in response to a query list of species names. The database consists of 1 million single- and multi-locus data sets, each with a confidence set of 1000 putative species trees, computed from GenBank sequence data for 413,000 eukaryotic taxa. Two bodies of theoretical work are leveraged to aid in the assembly of multi-locus concatenated data sets for species tree construction. First, multiply labeled gene trees are pruned to conflict-free singly-labeled species-level trees that can be combined between loci. Second, impacts of missing data in multi-locus data sets are ameliorated by assembling only decisive data sets. Data sets overlapping with the user's query are ranked using a scheme that depends on user-provided weights for tree quality and for taxonomic overlap of the tree with the query. Retrieval times are independent of the size of the database, typically a few seconds. Tree quality is assessed by a real-time evaluation of bootstrap support on just the overlapping subtree. Associated sequence alignments, tree files and metadata can be downloaded for subsequent analysis. STBase provides a tool for comparative biologists interested in exploiting the most relevant sequence data available for the taxa of interest. It may also serve as a prototype for future species tree oriented databases and as a resource for assembly of larger species phylogenies from precomputed

STBase: one million species trees for comparative biology.

Directory of Open Access Journals (Sweden)

Michelle M McMahon

Full Text Available Comprehensively sampled phylogenetic trees provide the most compelling foundations for strong inferences in comparative evolutionary biology. Mismatches are common, however, between the taxa for which comparative data are available and the taxa sampled by published phylogenetic analyses. Moreover, many published phylogenies are gene trees, which cannot always be adapted immediately for species level comparisons because of discordance, gene duplication, and other confounding biological processes. A new database, STBase, lets comparative biologists quickly retrieve species level phylogenetic hypotheses in response to a query list of species names. The database consists of 1 million single- and multi-locus data sets, each with a confidence set of 1000 putative species trees, computed from GenBank sequence data for 413,000 eukaryotic taxa. Two bodies of theoretical work are leveraged to aid in the assembly of multi-locus concatenated data sets for species tree construction. First, multiply labeled gene trees are pruned to conflict-free singly-labeled species-level trees that can be combined between loci. Second, impacts of missing data in multi-locus data sets are ameliorated by assembling only decisive data sets. Data sets overlapping with the user's query are ranked using a scheme that depends on user-provided weights for tree quality and for taxonomic overlap of the tree with the query. Retrieval times are independent of the size of the database, typically a few seconds. Tree quality is assessed by a real-time evaluation of bootstrap support on just the overlapping subtree. Associated sequence alignments, tree files and metadata can be downloaded for subsequent analysis. STBase provides a tool for comparative biologists interested in exploiting the most relevant sequence data available for the taxa of interest. It may also serve as a prototype for future species tree oriented databases and as a resource for assembly of larger species phylogenies

Isoprene emission from tropical tree species

International Nuclear Information System (INIS)

Padhy, P.K.; Varshney, C.K.

2005-01-01

Foliar emission of isoprene was measured in nine commonly growing tree species of Delhi, India. Dynamic flow enclosure technique was used and gas samples were collected onto Tenax-GC/Carboseive cartridges, which were then attached to the sample injection system in the gas chromatograph (GC). Eluting compounds were analysed using a flame ionisation detector (FID). Out of the nine tree species, isoprene emission was found in six species (Eucalyptus sp., Ficus benghalensis, Ficus religiosa, Mangifera indica, Melia azedarach, and Syzygium jambolanum), whereas, in the remaining three tree species (Alstonia scholaris, Azadirachta indica, and Cassia fistula) no isoprene emission was detected or the levels of emission were negligible or below the detection limit (BDL). Among six tree species, the highest hourly emission (10.2±6.8 μg g -1 leaf dry weight, average of five seasons) was observed in Ficus religiosa, while minimum emission was from Melia azedarach (2.2±4.9 μg g -1 leaf dry weight, average of five seasons). Isoprene emission (average of six species), over five seasons, was found to vary between 3.9 and 8.5 μg g -1 leaf dry weight during the rainy season. In addition, significant diurnal variation in isoprene emission was observed in each species. The preliminary estimate made in this study on the annual biogenic VOC emission from India may probably be the first of its kind from this part of the world. - Isoprene flux (diurnal and seasonal) from some tropical tree species was estimated and a regional comparison was made

Isoprene emission from tropical tree species

Energy Technology Data Exchange (ETDEWEB)

Padhy, P.K. [School of Environmental Sciences, Jawaharlal Nehru University, New Delhi 110 067 (India)]. E-mail: padhypk2003@yahoo.com; Varshney, C.K. [School of Environmental Sciences, Jawaharlal Nehru University, New Delhi 110 067 (India)

2005-05-01

Foliar emission of isoprene was measured in nine commonly growing tree species of Delhi, India. Dynamic flow enclosure technique was used and gas samples were collected onto Tenax-GC/Carboseive cartridges, which were then attached to the sample injection system in the gas chromatograph (GC). Eluting compounds were analysed using a flame ionisation detector (FID). Out of the nine tree species, isoprene emission was found in six species (Eucalyptus sp., Ficus benghalensis, Ficus religiosa, Mangifera indica, Melia azedarach, and Syzygium jambolanum), whereas, in the remaining three tree species (Alstonia scholaris, Azadirachta indica, and Cassia fistula) no isoprene emission was detected or the levels of emission were negligible or below the detection limit (BDL). Among six tree species, the highest hourly emission (10.2{+-}6.8 {mu}g g{sup -1} leaf dry weight, average of five seasons) was observed in Ficus religiosa, while minimum emission was from Melia azedarach (2.2{+-}4.9 {mu}g g{sup -1} leaf dry weight, average of five seasons). Isoprene emission (average of six species), over five seasons, was found to vary between 3.9 and 8.5 {mu}g g{sup -1} leaf dry weight during the rainy season. In addition, significant diurnal variation in isoprene emission was observed in each species. The preliminary estimate made in this study on the annual biogenic VOC emission from India may probably be the first of its kind from this part of the world. - Isoprene flux (diurnal and seasonal) from some tropical tree species was estimated and a regional comparison was made.

Exotic species and genetically modified organisms in aquaculture and enhanced fisheries: ICLARM's position

OpenAIRE

Pullin, R.S.V.

1994-01-01

This article contains a discussion paper on the use of exotic species and genetically modified organisms in aquaculture and enhanced fisheries, together with a summary of ICLARM's (International Center for Living Aquatic Resources Management, Philippines) current position on this important topic.

An overview of industrial tree plantation conflicts in the global South: conflicts, trends, and resistance struggles

NARCIS (Netherlands)

W. Overbeek (Wilfridus); M. Kröger (Markus); J. Gerber (Julien-François)

2012-01-01

markdownabstractOver the past two decades, industrial tree plantations (ITPs), typically large-scale, intensively managed, even-age monoculture plantations, mostly exotic trees like fast-growing eucalyptus, pine and acacia species, but also rubber and oil palm, all destined for industrial processe s

Exotic Eucalyptus leaves are preferred over tougher native species but affect the growth and survival of shredders in an Atlantic Forest stream (Brazil.

Directory of Open Access Journals (Sweden)

Walace P Kiffer

Full Text Available We evaluated the effect of leaves of native and exotic tree species on the feeding activity and performance of the larvae of Triplectides gracilis, a typical caddisfly shredder in Atlantic Forest streams. Leaves of four native species that differ in chemistry and toughness (Hoffmannia dusenii, Miconia chartacea, Myrcia lineata and Styrax pohlii and the exotic Eucalyptus globulus were used to determine food preferences and rates of consumption, production of fine particulate organic matter (FPOM, growth and survival of shredders. We hypothesized that the consumption rates of leaves of Eucalyptus and their effects on the growth and survival of shredders could be predicted by leaf chemistry and toughness. The larvae preferred to feed on soft leaves (H. dusenii and M. chartacea independently of the content of nutrients (N and P and secondary compounds (total phenolics. When such leaves were absent, they preferred E. globulus and did not consume the tough leaves (M. lineata and S. pohlii. In monodietary experiments, leaf consumption and FPOM production differed among the studied leaves, and the values observed for the E. globulus treatments were intermediate between the soft and tough leaves. The larvae that fed on H. dusenii and M. chartacea grew constantly over five weeks, while those that fed on E. globulus lost biomass. Larval survival was higher on leaves of H. dusenii, M. chartacea and S. pohlii than on E. globulus and M. lineata leaves. Although E. globulus was preferred over tougher leaves, long-term consumption of leaves of the exotic species may affect the abundance of T. gracilis in the studied stream. Additionally, our results suggest that leaf toughness can be a determining factor for the behavior of shredders where low-quality leaves are abundant, as in several tropical streams.

Exotic Eucalyptus leaves are preferred over tougher native species but affect the growth and survival of shredders in an Atlantic Forest stream (Brazil).

Science.gov (United States)

Kiffer, Walace P; Mendes, Flavio; Casotti, Cinthia G; Costa, Larissa C; Moretti, Marcelo S

2018-01-01

We evaluated the effect of leaves of native and exotic tree species on the feeding activity and performance of the larvae of Triplectides gracilis, a typical caddisfly shredder in Atlantic Forest streams. Leaves of four native species that differ in chemistry and toughness (Hoffmannia dusenii, Miconia chartacea, Myrcia lineata and Styrax pohlii) and the exotic Eucalyptus globulus were used to determine food preferences and rates of consumption, production of fine particulate organic matter (FPOM), growth and survival of shredders. We hypothesized that the consumption rates of leaves of Eucalyptus and their effects on the growth and survival of shredders could be predicted by leaf chemistry and toughness. The larvae preferred to feed on soft leaves (H. dusenii and M. chartacea) independently of the content of nutrients (N and P) and secondary compounds (total phenolics). When such leaves were absent, they preferred E. globulus and did not consume the tough leaves (M. lineata and S. pohlii). In monodietary experiments, leaf consumption and FPOM production differed among the studied leaves, and the values observed for the E. globulus treatments were intermediate between the soft and tough leaves. The larvae that fed on H. dusenii and M. chartacea grew constantly over five weeks, while those that fed on E. globulus lost biomass. Larval survival was higher on leaves of H. dusenii, M. chartacea and S. pohlii than on E. globulus and M. lineata leaves. Although E. globulus was preferred over tougher leaves, long-term consumption of leaves of the exotic species may affect the abundance of T. gracilis in the studied stream. Additionally, our results suggest that leaf toughness can be a determining factor for the behavior of shredders where low-quality leaves are abundant, as in several tropical streams.

Somatic embryogenesis and cryostorage for conservation and restoration of threatened forest trees

Science.gov (United States)

S.A. Merkle; A.R. Tull; H.J. Gladfelter; P.M. Montello; J.E. Mitchell; C. Ahn; R.D. McNeill

2017-01-01

Threats to North American forest trees from exotic pests and pathogens or habitat loss, make it imperative that every available tool be employed for conservation and restoration of these at risk species. One such tool, in vitro propagation, could greatly enhance conservation of forest tree genetic material and selection and breeding of resistant or...

Influence of Removal of a Non-native Tree Species Mimosa caesalpiniifolia Benth. on the Regenerating Plant Communities in a Tropical Semideciduous Forest Under Restoration in Brazil

Science.gov (United States)

Podadera, Diego S.; Engel, Vera L.; Parrotta, John A.; Machado, Deivid L.; Sato, Luciane M.; Durigan, Giselda

2015-11-01

Exotic species are used to trigger facilitation in restoration plantings, but this positive effect may not be permanent and these species may have negative effects later on. Since such species can provide a marketable product (firewood), their harvest may represent an advantageous strategy to achieve both ecological and economic benefits. In this study, we looked at the effect of removal of a non-native tree species ( Mimosa caesalpiniifolia) on the understory of a semideciduous forest undergoing restoration. We assessed two 14-year-old plantation systems (modified "taungya" agroforestry system; and mixed plantation using commercial timber and firewood tree species) established at two sites with contrasting soil properties in São Paulo state, Brazil. The experimental design included randomized blocks with split plots. The natural regeneration of woody species (height ≥0.2 m) was compared between managed (all M. caesalpiniifolia trees removed) and unmanaged plots during the first year after the intervention. The removal of M. caesalpiniifolia increased species diversity but decreased stand basal area. Nevertheless, the basal area loss was recovered after 1 year. The management treatment affected tree species regeneration differently between species groups. The results of this study suggest that removal of M. caesalpiniifolia benefited the understory and possibly accelerated the succession process. Further monitoring studies are needed to evaluate the longer term effects on stand structure and composition. The lack of negative effects of tree removal on the natural regeneration indicates that such interventions can be recommended, especially considering the expectations of economic revenues from tree harvesting in restoration plantings.

Exotic, native and seeded species and soil biotic community response to post-fire seedings in northern Utah

Science.gov (United States)

Megan Taylor

2013-01-01

Post-fire seeding of native species is intended to reduce weed entry, yet few studies have addressed the impacts of seeding methods on the establishment and persistence of exotic annuals. In summers of 2010 and 2011, we investigated productivity of exotic annuals across rehabilitation seedings that were established on the Scooby Wildfire site in northern Utah. The site...

Mitigating exotic impacts: restoring native deer mouse populations elevated by an exotic food subsidy

Science.gov (United States)

Dean E. Pearson; Robert J. Fletcher

2008-01-01

The threat posed by exotic organisms to native systems has led to extensive research on exotic invaders, yet management of invasives has progressed relatively slowly. This is partly due to poor understanding of how exotic species management influences native organisms. To address this shortfall, we experimentally evaluated the efficacy of an invasives management tool...

Big data of tree species distributions

DEFF Research Database (Denmark)

Serra-Diaz, Josep M.; Enquist, Brian J.; Maitner, Brian

2018-01-01

are currently available in big databases, several challenges hamper their use, notably geolocation problems and taxonomic uncertainty. Further, we lack a complete picture of the data coverage and quality assessment for open/public databases of tree occurrences. Methods: We combined data from five major...... and data aggregation, especially from national forest inventory programs, to improve the current publicly available data.......Background: Trees play crucial roles in the biosphere and societies worldwide, with a total of 60,065 tree species currently identified. Increasingly, a large amount of data on tree species occurrences is being generated worldwide: from inventories to pressed plants. While many of these data...

Coalescent-based species tree inference from gene tree topologies under incomplete lineage sorting by maximum likelihood.

Science.gov (United States)

Wu, Yufeng

2012-03-01

Incomplete lineage sorting can cause incongruence between the phylogenetic history of genes (the gene tree) and that of the species (the species tree), which can complicate the inference of phylogenies. In this article, I present a new coalescent-based algorithm for species tree inference with maximum likelihood. I first describe an improved method for computing the probability of a gene tree topology given a species tree, which is much faster than an existing algorithm by Degnan and Salter (2005). Based on this method, I develop a practical algorithm that takes a set of gene tree topologies and infers species trees with maximum likelihood. This algorithm searches for the best species tree by starting from initial species trees and performing heuristic search to obtain better trees with higher likelihood. This algorithm, called STELLS (which stands for Species Tree InfErence with Likelihood for Lineage Sorting), has been implemented in a program that is downloadable from the author's web page. The simulation results show that the STELLS algorithm is more accurate than an existing maximum likelihood method for many datasets, especially when there is noise in gene trees. I also show that the STELLS algorithm is efficient and can be applied to real biological datasets. © 2011 The Author. Evolution© 2011 The Society for the Study of Evolution.

Minimum variance rooting of phylogenetic trees and implications for species tree reconstruction.

Science.gov (United States)

Mai, Uyen; Sayyari, Erfan; Mirarab, Siavash

2017-01-01

Phylogenetic trees inferred using commonly-used models of sequence evolution are unrooted, but the root position matters both for interpretation and downstream applications. This issue has been long recognized; however, whether the potential for discordance between the species tree and gene trees impacts methods of rooting a phylogenetic tree has not been extensively studied. In this paper, we introduce a new method of rooting a tree based on its branch length distribution; our method, which minimizes the variance of root to tip distances, is inspired by the traditional midpoint rerooting and is justified when deviations from the strict molecular clock are random. Like midpoint rerooting, the method can be implemented in a linear time algorithm. In extensive simulations that consider discordance between gene trees and the species tree, we show that the new method is more accurate than midpoint rerooting, but its relative accuracy compared to using outgroups to root gene trees depends on the size of the dataset and levels of deviations from the strict clock. We show high levels of error for all methods of rooting estimated gene trees due to factors that include effects of gene tree discordance, deviations from the clock, and gene tree estimation error. Our simulations, however, did not reveal significant differences between two equivalent methods for species tree estimation that use rooted and unrooted input, namely, STAR and NJst. Nevertheless, our results point to limitations of existing scalable rooting methods.

Estimating phylogenetic relationships despite discordant gene trees across loci: the species tree of a diverse species group of feather mites (Acari: Proctophyllodidae).

Science.gov (United States)

Knowles, Lacey L; Klimov, Pavel B

2011-11-01

With the increased availability of multilocus sequence data, the lack of concordance of gene trees estimated for independent loci has focused attention on both the biological processes producing the discord and the methodologies used to estimate phylogenetic relationships. What has emerged is a suite of new analytical tools for phylogenetic inference--species tree approaches. In contrast to traditional phylogenetic methods that are stymied by the idiosyncrasies of gene trees, approaches for estimating species trees explicitly take into account the cause of discord among loci and, in the process, provides a direct estimate of phylogenetic history (i.e. the history of species divergence, not divergence of specific loci). We illustrate the utility of species tree estimates with an analysis of a diverse group of feather mites, the pinnatus species group (genus Proctophyllodes). Discord among four sequenced nuclear loci is consistent with theoretical expectations, given the short time separating speciation events (as evident by short internodes relative to terminal branch lengths in the trees). Nevertheless, many of the relationships are well resolved in a Bayesian estimate of the species tree; the analysis also highlights ambiguous aspects of the phylogeny that require additional loci. The broad utility of species tree approaches is discussed, and specifically, their application to groups with high speciation rates--a history of diversification with particular prevalence in host/parasite systems where species interactions can drive rapid diversification.

The potential of indigenous and naturalized fodder trees and shrubs for intensive use in central Kenya

NARCIS (Netherlands)

Roothaert, R.L.

2000-01-01

There are opportunities for increasing milk production in central Kenya through the use of tree fodder, leading to higher farm income. Most research for intensive use of fodder trees has been carried out on exotic species, neglecting indigenous ones. The objectives of this study were to

Species collapse via hybridization in Darwin's tree finches.

Science.gov (United States)

Kleindorfer, Sonia; O'Connor, Jody A; Dudaniec, Rachael Y; Myers, Steven A; Robertson, Jeremy; Sulloway, Frank J

2014-03-01

Species hybridization can lead to fitness costs, species collapse, and novel evolutionary trajectories in changing environments. Hybridization is predicted to be more common when environmental conditions change rapidly. Here, we test patterns of hybridization in three sympatric tree finch species (small tree finch Camarhynchus parvulus, medium tree finch Camarhynchus pauper, and large tree finch: Camarhynchus psittacula) that are currently recognized on Floreana Island, Galápagos Archipelago. Genetic analysis of microsatellite data from contemporary samples showed two genetic populations and one hybrid cluster in both 2005 and 2010; hybrid individuals were derived from genetic population 1 (small morph) and genetic population 2 (large morph). Females of the large and rare species were more likely to pair with males of the small common species. Finch populations differed in morphology in 1852-1906 compared with 2005/2010. An unsupervised clustering method showed (a) support for three morphological clusters in the historical tree finch sample (1852-1906), which is consistent with current species recognition; (b) support for two or three morphological clusters in 2005 with some (19%) hybridization; and (c) support for just two morphological clusters in 2010 with frequent (41%) hybridization. We discuss these findings in relation to species demarcations of Camarhynchus tree finches on Floreana Island.

Multipurpose fodder trees in Ethiopia : farmers'perception, constraints to adoption and effect of long-term supplementation on sheep performance

NARCIS (Netherlands)

Mekoya, A.

2008-01-01

Many organizations in Ethiopia have promoted exotic multipurpose fodder tree species particularly Sesbania sesban for livestock feed and soil improvement. Despite the apparent benefits, the number of farmers planting these trees was low. Moreover, some farmers feeding Sesbania sesban reported

Pushing the pace of tree species migration.

Directory of Open Access Journals (Sweden)

Eli D Lazarus

Full Text Available Plants and animals have responded to past climate changes by migrating with habitable environments, sometimes shifting the boundaries of their geographic ranges by tens of kilometers per year or more. Species migrating in response to present climate conditions, however, must contend with landscapes fragmented by anthropogenic disturbance. We consider this problem in the context of wind-dispersed tree species. Mechanisms of long-distance seed dispersal make these species capable of rapid migration rates. Models of species-front migration suggest that even tree species with the capacity for long-distance dispersal will be unable to keep pace with future spatial changes in temperature gradients, exclusive of habitat fragmentation effects. Here we present a numerical model that captures the salient dynamics of migration by long-distance dispersal for a generic tree species. We then use the model to explore the possible effects of assisted colonization within a fragmented landscape under a simulated tree-planting scheme. Our results suggest that an assisted-colonization program could accelerate species-front migration rates enough to match the speed of climate change, but such a program would involve an environmental-sustainability intervention at a massive scale.

Fire and invasive exotic plant species in eastern oak communities: an assessment of current knowledge

Science.gov (United States)

Cynthia D. Huebner

2006-01-01

Successful regeneration of oak-dominated communities in the Eastern United States historically requires disturbance such as fire, making them vulnerable to invasion by exotic plants. Little is currently known about the effects of fire on invasive plant species and the effects of invasive plant species on fire regimes of this region. Seventeen common eastern invaders...

An estimate of the number of tropical tree species

DEFF Research Database (Denmark)

Slik, J. W Ferry; Arroyo-Rodríguez, Víctor; Aiba, Shin Ichiro

2015-01-01

The high species richness of tropical forests has long been recognized, yet there remains substantial uncertainty regarding the actual number of tropical tree species. Using a pantropical tree inventory database from closed canopy forests, consisting of 657,630 trees belonging to 11,371 species, ...

An Estimate Of The Number Of Tropical Tree Species.

OpenAIRE

Slik, J W Ferry; Arroyo-Rodríguez, Víctor; Aiba, Shin-Ichiro; Alvarez-Loayza, Patricia; Alves, Luciana F; Ashton, Peter; Balvanera, Patricia; Bastian, Meredith L; Bellingham, Peter J; van den Berg, Eduardo; Bernacci, Luis; da Conceição Bispo, Polyanna; Blanc, Lilian; Böhning-Gaese, Katrin; Boeckx, Pascal

2016-01-01

The high species richness of tropical forests has long been recognized, yet there remains substantial uncertainty regarding the actual number of tropical tree species. Using a pantropical tree inventory database from closed canopy forests, consisting of 657,630 trees belonging to 11,371 species, we use a fitted value of Fisher's alpha and an approximate pantropical stem total to estimate the minimum number of tropical forest tree species to fall between similar to 40,000 and similar to 53,000...

DLRS: gene tree evolution in light of a species tree.

Science.gov (United States)

Sjöstrand, Joel; Sennblad, Bengt; Arvestad, Lars; Lagergren, Jens

2012-11-15

PrIME-DLRS (or colloquially: 'Delirious') is a phylogenetic software tool to simultaneously infer and reconcile a gene tree given a species tree. It accounts for duplication and loss events, a relaxed molecular clock and is intended for the study of homologous gene families, for example in a comparative genomics setting involving multiple species. PrIME-DLRS uses a Bayesian MCMC framework, where the input is a known species tree with divergence times and a multiple sequence alignment, and the output is a posterior distribution over gene trees and model parameters. PrIME-DLRS is available for Java SE 6+ under the New BSD License, and JAR files and source code can be downloaded from http://code.google.com/p/jprime/. There is also a slightly older C++ version available as a binary package for Ubuntu, with download instructions at http://prime.sbc.su.se. The C++ source code is available upon request. joel.sjostrand@scilifelab.se or jens.lagergren@scilifelab.se. PrIME-DLRS is based on a sound probabilistic model (Åkerborg et al., 2009) and has been thoroughly validated on synthetic and biological datasets (Supplementary Material online).

Tree Species Identity Shapes Earthworm Communities

DEFF Research Database (Denmark)

Schelfhout, Stephanie; Mertens, Jan; Verheyen, Kris

2017-01-01

Earthworms are key organisms in forest ecosystems because they incorporate organic material into the soil and affect the activity of other soil organisms. Here, we investigated how tree species affect earthworm communities via litter and soil characteristics. In a 36-year old common garden...... of soil and foliar litter, and determined the forest floor turnover rate and the density and biomass of the earthworm species occurring in the stands. Tree species significantly affected earthworm communities via leaf litter and/or soil characteristics. Anecic earthworms were abundant under Fraxinus, Acer...

Shrubs as ecosystem engineers across an environmental gradient: effects on species richness and exotic plant invasion.

Science.gov (United States)

Kleinhesselink, Andrew R; Magnoli, Susan M; Cushman, J Hall

2014-08-01

Ecosystem-engineering plants modify the physical environment and can increase species diversity and exotic species invasion. At the individual level, the effects of ecosystem engineers on other plants often become more positive in stressful environments. In this study, we investigated whether the community-level effects of ecosystem engineers also become stronger in more stressful environments. Using comparative and experimental approaches, we assessed the ability of a native shrub (Ericameria ericoides) to act as an ecosystem engineer across a stress gradient in a coastal dune in northern California, USA. We found increased coarse organic matter and lower wind speeds within shrub patches. Growth of a dominant invasive grass (Bromus diandrus) was facilitated both by aboveground shrub biomass and by growing in soil taken from shrub patches. Experimental removal of shrubs negatively affected species most associated with shrubs and positively affected species most often found outside of shrubs. Counter to the stress-gradient hypothesis, the effects of shrubs on the physical environment and individual plant growth did not increase across the established stress gradient at this site. At the community level, shrub patches increased beta diversity, and contained greater rarified richness and exotic plant cover than shrub-free patches. Shrub effects on rarified richness increased with environmental stress, but effects on exotic cover and beta diversity did not. Our study provides evidence for the community-level effects of shrubs as ecosystem engineers in this system, but shows that these effects do not necessarily become stronger in more stressful environments.

Exotic annual Bromus invasions: Comparisons among species and ecoregions in the western United States [Chapter 2

Science.gov (United States)

Matthew L. Brooks; Cynthia S. Brown; Jeanne C. Chambers; Carla M. D' Antonio; Jon E. Keeley; Jayne Belnap

2016-01-01

Exotic annual Bromus species are widely recognized for their potential to invade, dominate, and alter the structure and function of ecosystems. In this chapter, we summarize the invasion potential, ecosystem threats, and management strategies for different Bromus species within each of five ecoregions of the western United States. We characterize invasion...

Health evaluation of volatile organic compound (VOC) emission from exotic wood products

DEFF Research Database (Denmark)

Kirkeskov, L; Witterseh, T; Funch, L W

2009-01-01

The purpose of this study was to measure and evaluate the impact of the emissions of selected products of exotic wood on health. Ten products were screened for chemical compounds, and five of the most used products which emitted more than 800 microg/kg were selected for further quantitative...... analyses by climate chamber measurement (iroko, ramin, sheesham, merbau, and rubber tree). Samples of exotic wood (rubber tree and belalu) were further analyzed for emission of chemical compounds by migration into artificial saliva and for content of pesticides and allergenic natural rubber latex (NR latex......) (rubber tree). The toxicological effects of all substances identified were evaluated and the lowest concentrations of interest (LCI) assessed. An R-value was calculated for each wood product (R-value below 1 is considered to be unproblematic as regards health). Emission from the evaluated exotic wood only...

Species Trials at the Waiakea Arboretum, Hilo, Hawaii

Science.gov (United States)

George B. Richmond

1963-01-01

Survival counts were made of 84 exotic tree species planted during 1956-1960 in a cleared rain-forest area near Hilo, Hawaii. Growth measurements were recorded for 5- and 6-year-old plantings. Most species had good survival, but some failed entirely. Soil depth was found to have a strong influence on rate of growth, but not on survival. Several valuable timber species...

A Bayesian Supertree Model for Genome-Wide Species Tree Reconstruction

Science.gov (United States)

De Oliveira Martins, Leonardo; Mallo, Diego; Posada, David

2016-01-01

Current phylogenomic data sets highlight the need for species tree methods able to deal with several sources of gene tree/species tree incongruence. At the same time, we need to make most use of all available data. Most species tree methods deal with single processes of phylogenetic discordance, namely, gene duplication and loss, incomplete lineage sorting (ILS) or horizontal gene transfer. In this manuscript, we address the problem of species tree inference from multilocus, genome-wide data sets regardless of the presence of gene duplication and loss and ILS therefore without the need to identify orthologs or to use a single individual per species. We do this by extending the idea of Maximum Likelihood (ML) supertrees to a hierarchical Bayesian model where several sources of gene tree/species tree disagreement can be accounted for in a modular manner. We implemented this model in a computer program called guenomu whose inputs are posterior distributions of unrooted gene tree topologies for multiple gene families, and whose output is the posterior distribution of rooted species tree topologies. We conducted extensive simulations to evaluate the performance of our approach in comparison with other species tree approaches able to deal with more than one leaf from the same species. Our method ranked best under simulated data sets, in spite of ignoring branch lengths, and performed well on empirical data, as well as being fast enough to analyze relatively large data sets. Our Bayesian supertree method was also very successful in obtaining better estimates of gene trees, by reducing the uncertainty in their distributions. In addition, our results show that under complex simulation scenarios, gene tree parsimony is also a competitive approach once we consider its speed, in contrast to more sophisticated models. PMID:25281847

A Bayesian Supertree Model for Genome-Wide Species Tree Reconstruction.

Science.gov (United States)

De Oliveira Martins, Leonardo; Mallo, Diego; Posada, David

2016-05-01

Current phylogenomic data sets highlight the need for species tree methods able to deal with several sources of gene tree/species tree incongruence. At the same time, we need to make most use of all available data. Most species tree methods deal with single processes of phylogenetic discordance, namely, gene duplication and loss, incomplete lineage sorting (ILS) or horizontal gene transfer. In this manuscript, we address the problem of species tree inference from multilocus, genome-wide data sets regardless of the presence of gene duplication and loss and ILS therefore without the need to identify orthologs or to use a single individual per species. We do this by extending the idea of Maximum Likelihood (ML) supertrees to a hierarchical Bayesian model where several sources of gene tree/species tree disagreement can be accounted for in a modular manner. We implemented this model in a computer program called guenomu whose inputs are posterior distributions of unrooted gene tree topologies for multiple gene families, and whose output is the posterior distribution of rooted species tree topologies. We conducted extensive simulations to evaluate the performance of our approach in comparison with other species tree approaches able to deal with more than one leaf from the same species. Our method ranked best under simulated data sets, in spite of ignoring branch lengths, and performed well on empirical data, as well as being fast enough to analyze relatively large data sets. Our Bayesian supertree method was also very successful in obtaining better estimates of gene trees, by reducing the uncertainty in their distributions. In addition, our results show that under complex simulation scenarios, gene tree parsimony is also a competitive approach once we consider its speed, in contrast to more sophisticated models. © The Author(s) 2014. Published by Oxford University Press on behalf of the Society of Systematic Biologists.

A new genus and species of native exotic millipede in Australia (Diplopoda, Polydesmida, Paradoxosomatidae)

Science.gov (United States)

Mesibov, Robert; Car, Catherine A.

2015-01-01

Abstract Taxidiotisoma portabile gen. n., sp. n. is described from scattered populations in New South Wales, Victoria and Tasmania, Australia. Populations of Taxidiotisoma portabile in Victoria, Tasmania and parts of New South Wales occur in urban, suburban and agricultural areas, with no collections of the species in natural habitats in the same district. Taxidiotisoma portabile is likely to be a native exotic species whose home range is in eastern New South Wales. PMID:25931961

A new genus and species of native exotic millipede in Australia (Diplopoda, Polydesmida, Paradoxosomatidae

Directory of Open Access Journals (Sweden)

Robert Mesibov

2015-04-01

Full Text Available Taxidiotisoma portabile gen. n., sp. n. is described from scattered populations in New South Wales, Victoria and Tasmania, Australia. Populations of T. portabile in Victoria, Tasmania and parts of New South Wales occur in urban, suburban and agricultural areas, with no collections of the species in natural habitats in the same district. Taxidiotisoma portabile is likely to be a native exotic species whose home range is in eastern New South Wales.

Assessing exotic plant species invasions and associated soil characteristics: A case study in eastern Rocky Mountain National Park, Colorado, USA, using the pixel nested plot design

Science.gov (United States)

Kalkhan, M.A.; Stafford, E.J.; Woodly, P.J.; Stohlgren, T.J.

2007-01-01

Rocky Mountain National Park (RMNP), Colorado, USA, contains a diversity of plant species. However, many exotic plant species have become established, potentially impacting the structure and function of native plant communities. Our goal was to quantify patterns of exotic plant species in relation to native plant species, soil characteristics, and other abiotic factors that may indicate or predict their establishment and success. Our research approach for field data collection was based on a field plot design called the pixel nested plot. The pixel nested plot provides a link to multi-phase and multi-scale spatial modeling-mapping techniques that can be used to estimate total species richness and patterns of plant diversity at finer landscape scales. Within the eastern region of RMNP, in an area of approximately 35,000 ha, we established a total of 60 pixel nested plots in 9 vegetation types. We used canonical correspondence analysis (CCA) and multiple linear regressions to quantify relationships between soil characteristics and native and exotic plant species richness and cover. We also used linear correlation, spatial autocorrelation and cross correlation statistics to test for the spatial patterns of variables of interest. CCA showed that exotic species were significantly (P radiation (r = 0.55), soil nitrogen (r = 0.58) and bare ground (r = -0.66). Pearson's correlation statistic showed significant linear relationships between exotic species, organic carbon, soil nitrogen, and bare ground. While spatial autocorrelations indicated that our 60 pixel nested plots were spatially independent, the cross correlation statistics indicated that exotic plant species were spatially associated with bare ground, in general, exotic plant species were most abundant in areas of high native species richness. This indicates that resource managers should focus on the protection of relatively rare native rich sites with little canopy cover, and fertile soils. Using the pixel nested

Farmers' contributions to the conservation of tree diversity in the Groundnut Basin, Senegal

Institute of Scientific and Technical Information of China (English)

Antoine Sambou; Bienvenu Sambou; Anders R(ae)bild

2017-01-01

Tree diversity in West Africa is threatened by intensified land uses and salinization,and farmers' role in conservation of tree species is unclear.We hypothesized that farmers contribute to conservation of tree diversity through protection of trees in their agroforestry landscapes and compared the diversity and structure of the tree vegetation across landscape classes.Inventories were carried out in three villages in the Groundnut Basin in Senegal,assessing tree diversity,density and crown cover.Tree diversity as assessed by species accumulation curves was high in forests,but cultivated landscapes had comparable or almost comparable diversity,especially in the cases where the forest was planted or was affected by charcoal production.However,the occurrence of exotic species was higher in cultivated parts of the landscape,and although many species were in common,ordination plots indicated that forests and cultivated landscapes to some degree had different species composition.Salinity had a strong influence on vegetation,not only in the tans (salt marshes) but also across the other landscape classes.In conclusion,agroforestry landscapes in the three villages harbor considerable tree diversity,but insufficient to fully conserve the tree species.We argue that informing and including farmers in tree management in the region will contribute to overall conservation of tree genetic resources.

Tree species effect on the redistribution of soil metals

NARCIS (Netherlands)

Mertens, J.; Nevel, Van L.; Schrijver, De A.; Piesschaert, F.; Oosterbaan, A.; Tack, F.M.G.; Verheyen, K.

2007-01-01

Phytostabilization of metals using trees is often promoted although the influence of different tree species on the mobilization of metals is not yet clear. Soil and biomass were sampled 33 years after planting four tree species (Quercus robur, Fraxinus excelsior, Acer pseudoplatanus, Populus

The South African fruit fly action plan: area-wide suppression and exotic species surveillance

Energy Technology Data Exchange (ETDEWEB)

Barnes, Brian N., E-mail: barnesb@arc.agric.z [ARC Infruitec-Nietvoorbij Institute for Fruit, Vine and Wine, Stellenbosch (South Africa); Venter, Jan-Hendrik, E-mail: janhendrikv@nda.agric.z [Directorate Plant Health, Pretoria (South Africa)

2006-07-01

Two species of tephritid fruit flies of economic importance, Mediterranean fruit fly (Medfly, Ceratitis capitata [Wiedemann]) and Natal fruit fly (C. rosa Karsch) cause economic losses in the South African deciduous fruit industry of approximately US$3 million per annum. A third species, marula fruit fly, C. cosyra (Walker), causes damage to citrus and sub-tropical fruits in the north-eastern part of the country. In 1999 a sterile insect technique (SIT) programme against Medfly was initiated over 10,000 ha of table grapes with a goal of cost-effective, ecologically compatible suppression of Medfly. The SIT programme was extended to two other fruit production areas in 2004. Although results in all three SIT areas have been mixed, populations of wild Medflies, as well as associated pesticide usage and control costs, have been reduced since the start of sterile fly releases. Reasons for the partial degree of success and the relatively slow expansion of Medfly SIT to other areas include economic, operational and cultural factors, as well as certain fruit production practices. Before fruit fly-free areas can be created, deficiencies in the ability to mass-rear Natal fruit fly need to be overcome so that an SIT programme against this species can be initiated. Any fruit fly suppression or eradication campaign will be severely compromised by any introductions into South Africa of exotic fruit fly species. The risk of such introductions is increasing as trade with and travel to the country increases. A Plant Health Early Warning Systems Division has been initiated to formulate fruit fly detection and action plans. Melon fly (Bactrocera cucurbitae [Coquillett]), Asian fruit fly (B. invadens Drew, Tsurutu and White) and peach fruit fly (B. zonata [Saunders]), which are all well established in parts of Africa and/or Indian Ocean islands, have been identified as presenting the highest risk for entering and becoming established in South Africa. An exotic fruit fly surveillance

The South African fruit fly action plan: area-wide suppression and exotic species surveillance

International Nuclear Information System (INIS)

Barnes, Brian N.; Venter, Jan-Hendrik

2006-01-01

Two species of tephritid fruit flies of economic importance, Mediterranean fruit fly (Medfly, Ceratitis capitata [Wiedemann]) and Natal fruit fly (C. rosa Karsch) cause economic losses in the South African deciduous fruit industry of approximately US$3 million per annum. A third species, marula fruit fly, C. cosyra (Walker), causes damage to citrus and sub-tropical fruits in the north-eastern part of the country. In 1999 a sterile insect technique (SIT) programme against Medfly was initiated over 10,000 ha of table grapes with a goal of cost-effective, ecologically compatible suppression of Medfly. The SIT programme was extended to two other fruit production areas in 2004. Although results in all three SIT areas have been mixed, populations of wild Medflies, as well as associated pesticide usage and control costs, have been reduced since the start of sterile fly releases. Reasons for the partial degree of success and the relatively slow expansion of Medfly SIT to other areas include economic, operational and cultural factors, as well as certain fruit production practices. Before fruit fly-free areas can be created, deficiencies in the ability to mass-rear Natal fruit fly need to be overcome so that an SIT programme against this species can be initiated. Any fruit fly suppression or eradication campaign will be severely compromised by any introductions into South Africa of exotic fruit fly species. The risk of such introductions is increasing as trade with and travel to the country increases. A Plant Health Early Warning Systems Division has been initiated to formulate fruit fly detection and action plans. Melon fly (Bactrocera cucurbitae [Coquillett]), Asian fruit fly (B. invadens Drew, Tsurutu and White) and peach fruit fly (B. zonata [Saunders]), which are all well established in parts of Africa and/or Indian Ocean islands, have been identified as presenting the highest risk for entering and becoming established in South Africa. An exotic fruit fly surveillance

Current status of bird pest species in agroecosystems of Buenos Aires province, central Argentina

Directory of Open Access Journals (Sweden)

Codesido, M.

2011-10-01

Full Text Available We carried out the first assessment of abundance and distribution of bird pest species (eared dove Zenaida auriculata, monk parakeet Myiopsitta monachus, picazuro pigeon Patagioenas picazuro and spot-winged pigeon P. maculosa in the pampas of Buenos Aires province, Argentina, and analyzed their association with the presence of crops and/or introduced exotic woodlots in the rural landscape. We surveyed 35 transects located along secondary roads. Bird pest abundance was significantly higher at those sites with presence of woodlots (p<0.0001. Species-specific analyses revealed that abundance of both monk parakeet and picazuro pigeon was sensitive to the frequency of woodlots of tall and perennial tree species (Eucalyptus spp.; p<0.001, whereas eared dove abundance increased significantly with the frequency of woodlots composed by short and perennial tree species (Pinus spp., Casuarina spp.; p=0.002. Most bird pest species in the study area are more sensitive to the presence of woodlots rather than to the presence of croplands in the rural landscape. These results have practical implications, suggesting that an effective control of bird pest species in Buenos Aires province could be attained by managing exotic perennial tree species woodlots.

Incorporating climate change and exotic species into forecasts of riparian forest distribution.

Directory of Open Access Journals (Sweden)

Dana H Ikeda

Full Text Available We examined the impact climate change (CC will have on the availability of climatically suitable habitat for three native and one exotic riparian species. Due to its increasing prevalence in arid regions throughout the western US, we predicted that an exotic species, Tamarix, would have the greatest increase in suitable habitat relative to native counterparts under CC. We used an ecological niche model to predict range shifts of Populus fremontii, Salix gooddingii, Salix exigua and Tamarix, from present day to 2080s, under five general circulation models and one climate change scenario (A1B. Four major findings emerged. 1 Contrary to our original hypothesis, P. fremontii is projected to have the greatest increase in suitable habitat under CC, followed closely by Tamarix. 2 Of the native species, S. gooddingii and S. exigua showed the greatest loss in predicted suitable habitat due to CC. 3 Nearly 80 percent of future P. fremontii and Salix habitat is predicted to be affected by either CC or Tamarix by the 2080s. 4 By the 2080s, 20 percent of S. gooddingii habitat is projected to be affected by both Tamarix and CC concurrently, followed by S. exigua (19 percent and P. fremontii (13 percent. In summary, while climate change alone will negatively impact both native willow species, Tamarix is likely to affect a larger portion of all three native species' distributions. We discuss these and other results in the context of prioritizing restoration and conservation efforts to optimize future productivity and biodiversity. As we are accounting for only direct effects of CC and Tamarix on native habitat, we present a possible hierarchy of effects- from the direct to the indirect- and discuss the potential for the indirect to outweigh the direct effects. Our results highlight the need to account for simultaneous challenges in the face of CC.

STRIDE: Species Tree Root Inference from Gene Duplication Events.

Science.gov (United States)

Emms, David M; Kelly, Steven

2017-12-01

The correct interpretation of any phylogenetic tree is dependent on that tree being correctly rooted. We present STRIDE, a fast, effective, and outgroup-free method for identification of gene duplication events and species tree root inference in large-scale molecular phylogenetic analyses. STRIDE identifies sets of well-supported in-group gene duplication events from a set of unrooted gene trees, and analyses these events to infer a probability distribution over an unrooted species tree for the location of its root. We show that STRIDE correctly identifies the root of the species tree in multiple large-scale molecular phylogenetic data sets spanning a wide range of timescales and taxonomic groups. We demonstrate that the novel probability model implemented in STRIDE can accurately represent the ambiguity in species tree root assignment for data sets where information is limited. Furthermore, application of STRIDE to outgroup-free inference of the origin of the eukaryotic tree resulted in a root probability distribution that provides additional support for leading hypotheses for the origin of the eukaryotes. © The Author 2017. Published by Oxford University Press on behalf of the Society for Molecular Biology and Evolution.

Section-Based Tree Species Identification Using Airborne LIDAR Point Cloud

Science.gov (United States)

Yao, C.; Zhang, X.; Liu, H.

2017-09-01

The application of LiDAR data in forestry initially focused on mapping forest community, particularly and primarily intended for largescale forest management and planning. Then with the smaller footprint and higher sampling density LiDAR data available, detecting individual tree overstory, estimating crowns parameters and identifying tree species are demonstrated practicable. This paper proposes a section-based protocol of tree species identification taking palm tree as an example. Section-based method is to detect objects through certain profile among different direction, basically along X-axis or Y-axis. And this method improve the utilization of spatial information to generate accurate results. Firstly, separate the tree points from manmade-object points by decision-tree-based rules, and create Crown Height Mode (CHM) by subtracting the Digital Terrain Model (DTM) from the digital surface model (DSM). Then calculate and extract key points to locate individual trees, thus estimate specific tree parameters related to species information, such as crown height, crown radius, and cross point etc. Finally, with parameters we are able to identify certain tree species. Comparing to species information measured on ground, the portion correctly identified trees on all plots could reach up to 90.65 %. The identification result in this research demonstrate the ability to distinguish palm tree using LiDAR point cloud. Furthermore, with more prior knowledge, section-based method enable the process to classify trees into different classes.

The infestation by an exotic ambrosia beetle, Euplatypus parallelus (F. (Coleoptera: Curculionidae: Platypodinae of Angsana trees (Pterocarpus indicus Willd. in southern Thailand

Directory of Open Access Journals (Sweden)

Sara Bumrungsri

2008-07-01

Full Text Available An exotic ambrosia beetle, Euplatypus parallelus (F. was collected from infested Pterocarpus indicus Willd. trees in Prince of Songkla University. Larvae and eggs were found in simple galleries with a single branch. Either a single male or a male and a female were found in each gallery. Half of these infested trees were previously attacked by long-horned beetles probably Aristobia horridula (Hope (Coleoptera: Cerambycidae, while some of them appeared to be healthy. Fusarium oxysporum Schlecht.:Fr. was isolated from frass, sapwood samples and insect larvae, and might be a cause of death of P.indicus.

Clams sensitivity towards As and Hg: A comprehensive assessment of native and exotic species.

Science.gov (United States)

Velez, Cátia; Freitas, Rosa; Antunes, Sara C; Soares, Amadeu M V M; Figueira, Etelvina

2016-03-01

To assess the environmental impact of As and Hg, bioindicator organisms such as bivalves have been used. Nevertheless, few studies have assessed the impacts of As and Hg in Ruditapes decussatus and Ruditapes philippinarum, which are native and exotic species in Europe, respectively. The main goal of the present study was to assess elements' partitioning and detoxification strategies of R. decussatus and R. philippinarum. Both clams showed a higher capacity to bioconcentrate Hg (BCF 2.29-7.49), when compared to As (0.59-1.09). Furthermore, As accumulation in both species was similar in the soluble and insoluble fractions, while in both species the majority of Hg was found in the insoluble fraction. Clams exposed to As showed different detoxification strategies, since R. decussatus had higher ability to enhance antioxidant enzymes and metallothioneins in order to reduce toxicity, and R.philippinarum increased glutathione S-transferase Ω activity, that catalyzes monomethyl arsenate reduction, the rate-limiting reaction in arsenic biotransformation. When exposed to Hg, R. decussatus presented, higher synthesis of antioxidant enzymes and lower LPO, being able to better tolerate Hg than the exotic species R. philippinarum. Thus under relevant levels of As and Hg contamination our work evidenced the higher ability of R. decussatus to survive and inhabit coastal environments not heavily contaminated by Hg and As. Copyright © 2015 Elsevier Inc. All rights reserved.

Tree Species Identity Shapes Earthworm Communities

Directory of Open Access Journals (Sweden)

Stephanie Schelfhout

2017-03-01

Full Text Available Earthworms are key organisms in forest ecosystems because they incorporate organic material into the soil and affect the activity of other soil organisms. Here, we investigated how tree species affect earthworm communities via litter and soil characteristics. In a 36-year old common garden experiment, replicated six times over Denmark, six tree species were planted in blocks: sycamore maple (Acer pseudoplatanus, beech (Fagus sylvatica, ash (Fraxinus excelsior, Norway spruce (Picea abies, pedunculate oak (Quercus robur and lime (Tilia cordata. We studied the chemical characteristics of soil and foliar litter, and determined the forest floor turnover rate and the density and biomass of the earthworm species occurring in the stands. Tree species significantly affected earthworm communities via leaf litter and/or soil characteristics. Anecic earthworms were abundant under Fraxinus, Acer and Tilia, which is related to calcium-rich litter and low soil acidification. Epigeic earthworms were indifferent to calcium content in leaf litter and were shown to be mainly related to soil moisture content and litter C:P ratios. Almost no earthworms were found in Picea stands, likely because of the combined effects of recalcitrant litter, low pH and low soil moisture content.

EXOTIC PLANTS IN THE CIBODAS BOTANIC GARDENS REMNANT FOREST: INVENTORY AND CLUSTER ANALYSIS OF SEVERAL ENVIRONMENTAL FACTORS

Directory of Open Access Journals (Sweden)

Decky Indrawan Junaedi

2014-01-01

Full Text Available Due to potential impact of invasive alien (exotic species to the natural ecosystems, inventory of exotic species in the Cibodas Botanic Gardens (CBG remnant forest area is an urgent need for CBG. Inventory of exotic species can assist gardens manager to set priorities and plan better responses for possible or existed invasive plants in the CBG remnants forest. The objectives of this study are to do inventory of the exotic species in the CBG remnant forest and to determine whether several environmental variables play role to the existence of exotic species in the CBG remnant forests. There are 26 exotic plant species (23 genera, 14 families found and recorded from all four remnant forests in CBG. Cluster analysis of four environmental variables shows that clustering of environmental factors of exotic species correlates with the abundances of those exotic species. The relation between environmental factor clusters and the abundance of those exotics signify the role of environmental variables on the existence of exotic plant species. The information of exotic plant species in the remnants forest is the base information for gardens manager to manage exotic species in CBG remnants forest. The relation of several environmental factors with exotic species abundance could assist gardens manager to understand better the supportive and or suppressor factors of exotics in the CBG remnants forest. Further study on these species is needed to set priorities to decide which species should be treated first in order to minimize the impact of exotic plant species to native ecosystem of CBG.

EXOTIC PLANTS IN THE CIBODAS BOTANIC GARDENS REMNANT FOREST: INVENTORY AND CLUSTER ANALYSIS OF SEVERAL ENVIRONMENTAL FACTORS

Directory of Open Access Journals (Sweden)

Decky Indrawan Junaedi

2014-01-01

Full Text Available Due to potential impact of invasive alien (exotic species to the natural ecosystems, inventory of exotic species in the Cibodas Botanic Gardens (CBG remnant forest area is an urgent need for CBG. Inventory of exotic species can assist gardens manager to set priorities and plan better responses for possible or existed invasive plants in the CBG remnants forest. The objectives of this study are to do inventory of the exotic species in the CBG remnant forest and to determine whether several environmental variables play role to the existence of exotic species in the CBG remnant forests. There are 26 exotic plant species  (23 genera, 14 families found and recorded from all four remnant forests in CBG. Cluster analysis of four environmental variables shows that clustering of environmental factors of exotic species correlates with the abundances of those exotic species. The relation between environmental factor clusters and the abundance of those exotics signify the role of environmental variables on the existence of exotic plant species. The information of exotic plant species in the remnants forest is the base information for gardens manager to manage exotic species in CBG remnants forest. The relation of several environmental factors with exotic species abundance could assist gardens manager to understand better the supportive and or suppressor factors of exotics in the CBG remnants forest. Further study on these species is needed to set priorities to decide which species should be treated first in order to minimize the impact of exotic plant species to native ecosystem of CBG.

Understanding recruitment failure in tropical tree species: Insights from a tree ring study

NARCIS (Netherlands)

Vlam, M.; Baker, P.J.; Bunyavejchewin, S.; Mohren, G.M.J.; Zuidema, P.A.

2014-01-01

Many tropical tree species have population structures that exhibit strong recruitment failure. While the presence of adult trees indicates that appropriate regeneration conditions occurred in the past, it is often unclear why small individuals are absent. Knowing how, when and where these tree

Exotic snakes are not always found in exotic places: how poison centres can assist emergency departments.

Science.gov (United States)

Lubich, Carol; Krenzelok, Edward P

2007-11-01

Emergency departments throughout the USA may have some familiarity with the management of envenomation from indigenous snake species such as Crotalinae (rattlesnakes) and Micrurus (coral snakes). However, venomous species may include exotic reptiles whose bites pose substantial treatment challenges due to both a lack of experience and the difficulty in obtaining antivenoms. Two pet cobra envenomation incidents illustrate the challenges that face emergency departments, especially in urban settings, that are confronted with these exposures. It is important for emergency departments to be aware of the large underground presence of exotic venomous reptile pets and to utilise the expertise of regional poison centres that will also assist in the procurement of exotic antivenoms.

Transpiration and water use efficiency in native chilean and exotic species, a usefull tool for catchment management?

Science.gov (United States)

Hervé-Fernández, P.; Oyarzun, C. E.

2012-04-01

Land-use and forest cover change play important roles in socio-economic processes and have been linked with water supply and other ecosystem services in various regions of the world. Water yield from watersheds is a major ecosystem service for human activities but has been altered by landscape management superimposed on climatic variability and change. Sustaining ecosystem services important to humans, while providing a dependable water supply for agriculture and urban needs is a major challenge faced by managers of human-dominated or increased antropical effect over watersheds. Since water is mostly consumed by vegetation (i.e: transpiration), which strongly depends on trees physiological characteristics (i.e: foliar area, transpiration capacity) are very important. The quantity of water consumed by plantations is influenced mainly by forest characteristics (species physiology, age and management), catchment water retention capacity and meteorological characteristics. Eventhough in Chile, the forest sector accounts for 3.6% of the gross domestic product (GDP) and 12.5% of total exports (INFOR, 2003), afforestation with fast growing exotic species has ended up being socially and politically questionable because of the supposed impact on the environment and water resources. We present data of trees transpiration and water use efficiency from three headwater catchments: (a) second growth native evergreen forest (Aetoxicon punctatum, Drimys winterii, Gevuina avellana, Laureliopsis philippiana); (b) Eucalyptus globulus plantation, and (c) a mixed native deciduous (Nothofagus obliqua and some evergreen species) forest and Eucalyptus globulus and Acacia melanoxylon plantation located at the Coastal Mountain Range in southern Chile (40°S). Annual transpiration rates ranged from 1.24 ± 0.41 mol•m-2•s-1 (0.022 ± 0.009 L•m-2•s-1) for E. globulus, while the lowest observed was for L. philippiana 0.44 ± 0.31 mol•m-2•s-1 (0.008 ± 0.006 L•m-2•s-1). However

Testing for Polytomies in Phylogenetic Species Trees Using Quartet Frequencies.

Science.gov (United States)

Sayyari, Erfan; Mirarab, Siavash

2018-02-28

Phylogenetic species trees typically represent the speciation history as a bifurcating tree. Speciation events that simultaneously create more than two descendants, thereby creating polytomies in the phylogeny, are possible. Moreover, the inability to resolve relationships is often shown as a (soft) polytomy. Both types of polytomies have been traditionally studied in the context of gene tree reconstruction from sequence data. However, polytomies in the species tree cannot be detected or ruled out without considering gene tree discordance. In this paper, we describe a statistical test based on properties of the multi-species coalescent model to test the null hypothesis that a branch in an estimated species tree should be replaced by a polytomy. On both simulated and biological datasets, we show that the null hypothesis is rejected for all but the shortest branches, and in most cases, it is retained for true polytomies. The test, available as part of the Accurate Species TRee ALgorithm (ASTRAL) package, can help systematists decide whether their datasets are sufficient to resolve specific relationships of interest.

Testing for Polytomies in Phylogenetic Species Trees Using Quartet Frequencies

Science.gov (United States)

Sayyari, Erfan

2018-01-01

Phylogenetic species trees typically represent the speciation history as a bifurcating tree. Speciation events that simultaneously create more than two descendants, thereby creating polytomies in the phylogeny, are possible. Moreover, the inability to resolve relationships is often shown as a (soft) polytomy. Both types of polytomies have been traditionally studied in the context of gene tree reconstruction from sequence data. However, polytomies in the species tree cannot be detected or ruled out without considering gene tree discordance. In this paper, we describe a statistical test based on properties of the multi-species coalescent model to test the null hypothesis that a branch in an estimated species tree should be replaced by a polytomy. On both simulated and biological datasets, we show that the null hypothesis is rejected for all but the shortest branches, and in most cases, it is retained for true polytomies. The test, available as part of the Accurate Species TRee ALgorithm (ASTRAL) package, can help systematists decide whether their datasets are sufficient to resolve specific relationships of interest. PMID:29495636

Tree architecture and life-history strategies across 200 co-occurring tropical tree species

NARCIS (Netherlands)

Iida, Y.; Kohyama, T.S.; Kubo, T.; Kassim, A.R.; Poorter, L.; Sterck, F.J.; Potts, M.D.

2011-01-01

1. Tree architecture is thought to allow species to partition horizontal and vertical light gradients in the forest canopy. Tree architecture is closely related to light capture, carbon gain and the efficiency with which trees reach the canopy. Previous studies that investigated how light gradients

CosmoBon for studying wood formation under exotic gravitational environment for future space agriculture

Science.gov (United States)

Tomita-Yokotani, Kaori; Baba, Keiichi; Suzuki, Toshisada; Funada, Ryo; Nakamura, Teruko; Hashimoto, Hirofumi; Yamashita, Masamichi; Cosmobon, Jstwg

We are proposing to raise woody plants in space for several applications and plant science. Japanese flowering cherry tree is one of a candidate for these studies. Mechanism behind sensing gravity and controlling shape of tree has been studied quite extensively. Even molecular mechanism for the response of plant against gravity has been investigated quite intensively for various species, woody plants are left behind. Morphology of woody branch growth is different from that of stem growth in herbs. Morphology in tree is strongly dominated by the secondary xylem formation. Nobody knows the tree shape grown under the space environment. If whole tree could be brought up to space as research materials, it might provide important scientific knowledge. Furthermore, trees produce excess oxygen, wooden materials for living cabin, and provide biomass for cultivating mushroom and insect as for the space agriculture. Excellent tree shapes which would be deeply related to wood formation improve quality of life under stressful environment in outer space. The serious problem would be their size. Bonsai is one of the Japanese traditional arts. We can study secondly xylem formation, wood formation, under exotic gravitational environment using Bonsai. "CosmoBon" is the small tree Bonsai for our space experiment. It has been recognized that the reaction wood in CosmoBon is formed similar to natural trees. Our goal is to examine feasibility to grow various species of trees in space as bioresource for space agriculture.

Tree species effect on the redistribution of soil metals

International Nuclear Information System (INIS)

Mertens, Jan; Van Nevel, Lotte; De Schrijver, An; Piesschaert, Frederic; Oosterbaan, Anne; Tack, Filip M.G.; Verheyen, Kris

2007-01-01

Phytostabilization of metals using trees is often promoted although the influence of different tree species on the mobilization of metals is not yet clear. Soil and biomass were sampled 33 years after planting four tree species (Quercus robur, Fraxinus excelsior, Acer pseudoplatanus, Populus 'Robusta') in a plot experiment on dredged sediment. Poplar took up high amounts of Cd and Zn and this was associated with increased Cd and Zn concentrations in the upper soil layer. The other species contained normal concentrations of Cd, Cu, Cr, Pb and Zn in their tissues. Oak acidified the soil more than the other species and caused a decrease in the concentration of metals in the upper soil layer. The pH under poplar was lower than expected and associated with high carbon concentrations in the top soil. This might be assigned to retardation of the litter decomposition due to elevated Cd and Zn concentrations in the litter. - Trees (33-year-old) growing on polluted dredged sediment have influenced the metal concentration in the upper soil layer and there was a significant tree species effect

Mycorrhizal association of some agroforestry tree species in two ...

African Journals Online (AJOL)

Mycorrhizal colonization of different agroforestry tree species in two social forestry nurseries was investigated. Percentage of Arbuscular mycorrhizal (AM) infection, number of resting spores and AM fungi species varies both in tree species as well as in two different nurseries. This variation is attributed to various factors such ...

Partial diagnosis of street tree under power lines in West Regional of Minas Gerais

Directory of Open Access Journals (Sweden)

Altamir Fernandes de Oliveira

2016-03-01

Full Text Available This work aimed to present a partial diagnosis of street tree under power grid in five cities in the West Region of Minas Gerais, which had more power outages because of conflicts with trees. We identified 186 trees, belonging to 17 species of exotic origin and 30 species of native origin. The most frequent species were Poincianella pluviosa (30.43%, Ligustrum lucidum (10.86%, Michelia champaca (6.52% and Schinus molle (4.89%, which together amounted to 52.7% of the assessed trees. Most trees (84.78% were located in streets wider than 7 m, and 36.55% of the trees were planted in sidewalks with a minimum of 2 m wide. Those trees present ther first bifurcation at over 1.80 m above ground level. The pruning performed due to conflicts with the grid amounted 40.22%. Trees with height equal or over 6 m represents 72.83% of the sampled population. It was observed that there is not an appropriate management plan of urban trees under the grid, as the trees frequency is concentrate on few species that were mostly medium and large size.

Impacts of floods on forest trees and their coping strategies in Bangladesh

Directory of Open Access Journals (Sweden)

Shukla Rani Basak

2015-03-01

Full Text Available During recent years, the Government of Bangladesh, Non-Government Organizations (NGOs, semi-government organizations, private organizations and individuals have established a large number of plantations under different programs viz. social forestry, agro-forestry and avenue plantations with indigenous and exotic tree species without considering their habit and habitats. Along with the indigenous species like Albizia procera, Albizia lebbeck, Mangifera indica, Azadirachta indica, Gmelina arborea, Trewia nudiflora and Artocapus heterophyllus and many exotic species e.g. Swietenia macrophylla, Albizia saman, Dalbergia sissoo, Eucalyptus camaldulensis, Acacia auriculiformis, Melia sempervirens, Acacia mangium etc. have been planted randomly. With increasing trend of climate-induced floods, millions of trees have been dying due to floods and water-logging. The most affected species are Dalbergia sissoo, Albizia saman, Acacia auriculiformis, Acacia mangium and Artocarpus heterophyllus etc. This situation has caused severe impacts on socio-economic conditions of Bangladesh. The impacts involved a significant loss in terms of investment, biodiversity and afforestation program. Little investigations have been conducted to find out the causes of the deaths and also to find out the suitable adaptation practices to reduce impacts of floods on trees. This synthesis focused on the impacts of floods on plantations and also assessed the potential role of traditional forest management practices in addressing the effects flooding on forests in Bangladesh. The study added important information and revealed knowledge gaps on the causes of large forest deaths. It also provided recommendations for policy on the establishment of frequent floods resilient tree crop plantations.

tropiTree: An NGS-Based EST-SSR Resource for 24 Tropical Tree Species

Science.gov (United States)

Russell, Joanne R.; Hedley, Peter E.; Cardle, Linda; Dancey, Siobhan; Morris, Jenny; Booth, Allan; Odee, David; Mwaura, Lucy; Omondi, William; Angaine, Peter; Machua, Joseph; Muchugi, Alice; Milne, Iain; Kindt, Roeland; Jamnadass, Ramni; Dawson, Ian K.

2014-01-01

The development of genetic tools for non-model organisms has been hampered by cost, but advances in next-generation sequencing (NGS) have created new opportunities. In ecological research, this raises the prospect for developing molecular markers to simultaneously study important genetic processes such as gene flow in multiple non-model plant species within complex natural and anthropogenic landscapes. Here, we report the use of bar-coded multiplexed paired-end Illumina NGS for the de novo development of expressed sequence tag-derived simple sequence repeat (EST-SSR) markers at low cost for a range of 24 tree species. Each chosen tree species is important in complex tropical agroforestry systems where little is currently known about many genetic processes. An average of more than 5,000 EST-SSRs was identified for each of the 24 sequenced species, whereas prior to analysis 20 of the species had fewer than 100 nucleotide sequence citations. To make results available to potential users in a suitable format, we have developed an open-access, interactive online database, tropiTree (http://bioinf.hutton.ac.uk/tropiTree), which has a range of visualisation and search facilities, and which is a model for the efficient presentation and application of NGS data. PMID:25025376

Distribution characteristics of mineral elements in tree Species from ...

African Journals Online (AJOL)

Tree species populations were 44 in Akyaakrom (AS), 29 in Dopiri (DS), and families were 18 in AS and 16 in DS. Tree densities were 121 and 99 in AS and DS, respectively, in 0.57 ha. In terms of tree species population, diversity and density, AS was superior to DS. The distribution of major mineral elements in the leaves ...

Modeling Ecosystem Services for Park Trees: Sensitivity of i-Tree Eco Simulations to Light Exposure and Tree Species Classification

Directory of Open Access Journals (Sweden)

Rocco Pace

2018-02-01

Full Text Available Ecosystem modeling can help decision making regarding planting of urban trees for climate change mitigation and air pollution reduction. Algorithms and models that link the properties of plant functional types, species groups, or single species to their impact on specific ecosystem services have been developed. However, these models require a considerable effort for initialization that is inherently related to uncertainties originating from the high diversity of plant species in urban areas. We therefore suggest a new automated method to be used with the i-Tree Eco model to derive light competition for individual trees and investigate the importance of this property. Since competition depends also on the species, which is difficult to determine from increasingly used remote sensing methodologies, we also investigate the impact of uncertain tree species classification on the ecosystem services by comparing a species-specific inventory determined by field observation with a genus-specific categorization and a model initialization for the dominant deciduous and evergreen species only. Our results show how the simulation of competition affects the determination of carbon sequestration, leaf area, and related ecosystem services and that the proposed method provides a tool for improving estimations. Misclassifications of tree species can lead to large deviations in estimates of ecosystem impacts, particularly concerning biogenic volatile compound emissions. In our test case, monoterpene emissions almost doubled and isoprene emissions decreased to less than 10% when species were estimated to belong only to either two groups instead of being determined by species or genus. It is discussed that this uncertainty of emission estimates propagates further uncertainty in the estimation of potential ozone formation. Overall, we show the importance of using an individual light competition approach and explicitly parameterizing all ecosystem functions at the

Domestic exotics and the perception of invasibility

Science.gov (United States)

Qinfeng Guo; Robert Ricklefs

2010-01-01

Susceptibility of an area to invasion by exotic species is often judged by the fraction of introduced species in the local biota. However, the degree of invasion, particularly in mainland areas, has often been underestimated because of the exclusion of ‘domestic exotics’ (those introduced to internal units from within the national border) in calculations. Because all...

Loblolly pine seedling response to competition from exotic vs. native plants

Science.gov (United States)

Pedram Daneshgar; Shibu Jose; Craig Ramsey; Robin Collins

2006-01-01

A field study was conducted in Santa Rosa County, FL to test the hypothesis that an exotic understory would exert a higher degree of competition on tree seedling establishment and growth than native vegetation. The study site was a 60 ha cutover area infested with the invasive exotic cogongrass [Imperata cylindrica (L.) Raeusch.]. A completely...

Effects of tree species, water and nitrogen on mycorrhizal C flux

Science.gov (United States)

Menyailo, O.; Matvienko, A.

2012-12-01

Mycorrhiza plays an important role in global carbon cycle, especially, in forest soils, yet the effect of tree species on the amount and timing of C transfer through roots to myccorhiza is largely unknown. We studied the C transport to mycorrhiza under 6 most commonly dominant in boreal forests tree species using the mesh collars installed at the Siberian afforestation experiment. The CO2 flux from mycorrhizal and non-mycorrhizal mesh collars indicated the mycorrhizal C flux. Tree species strongly differed in C flux to mycorrhiza: more C was transferred by deciduous species than by conifers. The mycorrhizal CO2 flux was not linked to soil temperature but rather to trees phenology and to photosynthetic activity. All tree species transfered more carbon to mycorrhiza during the second half of summer and in September, this is because all the carbon photosynthesized earlier is used for building the tree biomass. Seasonal variation in C transfer to mycorrhiza was much larger than hourly variation (within a day). Nitrogen application (50 kg/ha) increased mycorrhizal C flux only under Scots pine, but not under larch, thus the effect of N application is tree species dependent. We found under most tree species that more C was transferred by trees to mycorrhiza in root-free collars, where the soil moisture was higher than in collars with roots. This suggests that trees preferentially support those parts of mycorrhiza, which can gain extra-resources.

A maximum pseudo-likelihood approach for estimating species trees under the coalescent model

Directory of Open Access Journals (Sweden)

Edwards Scott V

2010-10-01

Full Text Available Abstract Background Several phylogenetic approaches have been developed to estimate species trees from collections of gene trees. However, maximum likelihood approaches for estimating species trees under the coalescent model are limited. Although the likelihood of a species tree under the multispecies coalescent model has already been derived by Rannala and Yang, it can be shown that the maximum likelihood estimate (MLE of the species tree (topology, branch lengths, and population sizes from gene trees under this formula does not exist. In this paper, we develop a pseudo-likelihood function of the species tree to obtain maximum pseudo-likelihood estimates (MPE of species trees, with branch lengths of the species tree in coalescent units. Results We show that the MPE of the species tree is statistically consistent as the number M of genes goes to infinity. In addition, the probability that the MPE of the species tree matches the true species tree converges to 1 at rate O(M -1. The simulation results confirm that the maximum pseudo-likelihood approach is statistically consistent even when the species tree is in the anomaly zone. We applied our method, Maximum Pseudo-likelihood for Estimating Species Trees (MP-EST to a mammal dataset. The four major clades found in the MP-EST tree are consistent with those in the Bayesian concatenation tree. The bootstrap supports for the species tree estimated by the MP-EST method are more reasonable than the posterior probability supports given by the Bayesian concatenation method in reflecting the level of uncertainty in gene trees and controversies over the relationship of four major groups of placental mammals. Conclusions MP-EST can consistently estimate the topology and branch lengths (in coalescent units of the species tree. Although the pseudo-likelihood is derived from coalescent theory, and assumes no gene flow or horizontal gene transfer (HGT, the MP-EST method is robust to a small amount of HGT in the

Species trees for the tree swallows (Genus Tachycineta): an alternative phylogenetic hypothesis to the mitochondrial gene tree.

Science.gov (United States)

Dor, Roi; Carling, Matthew D; Lovette, Irby J; Sheldon, Frederick H; Winkler, David W

2012-10-01

The New World swallow genus Tachycineta comprises nine species that collectively have a wide geographic distribution and remarkable variation both within- and among-species in ecologically important traits. Existing phylogenetic hypotheses for Tachycineta are based on mitochondrial DNA sequences, thus they provide estimates of a single gene tree. In this study we sequenced multiple individuals from each species at 16 nuclear intron loci. We used gene concatenated approaches (Bayesian and maximum likelihood) as well as coalescent-based species tree inference to reconstruct phylogenetic relationships of the genus. We examined the concordance and conflict between the nuclear and mitochondrial trees and between concatenated and coalescent-based inferences. Our results provide an alternative phylogenetic hypothesis to the existing mitochondrial DNA estimate of phylogeny. This new hypothesis provides a more accurate framework in which to explore trait evolution and examine the evolution of the mitochondrial genome in this group. Copyright © 2012 Elsevier Inc. All rights reserved.

Relating tree growth to rainfall in Bolivian rain forests: a test for six species using tree ring analysis.

Science.gov (United States)

Brienen, Roel J W; Zuidema, Pieter A

2005-11-01

Many tropical regions show one distinct dry season. Often, this seasonality induces cambial dormancy of trees, particularly if these belong to deciduous species. This will often lead to the formation of annual rings. The aim of this study was to determine whether tree species in the Bolivian Amazon region form annual rings and to study the influence of the total amount and seasonal distribution of rainfall on diameter growth. Ring widths were measured on stem discs of a total of 154 trees belonging to six rain forest species. By correlating ring width and monthly rainfall data we proved the annual character of the tree rings for four of our study species. For two other species the annual character was proved by counting rings on trees of known age and by radiocarbon dating. The results of the climate-growth analysis show a positive relationship between tree growth and rainfall in certain periods of the year, indicating that rainfall plays a major role in tree growth. Three species showed a strong relationship with rainfall at the beginning of the rainy season, while one species is most sensitive to the rainfall at the end of the previous growing season. These results clearly demonstrate that tree ring analysis can be successfully applied in the tropics and that it is a promising method for various research disciplines.

Rapid and accurate species tree estimation for phylogeographic investigations using replicated subsampling.

Science.gov (United States)

Hird, Sarah; Kubatko, Laura; Carstens, Bryan

2010-11-01

We describe a method for estimating species trees that relies on replicated subsampling of large data matrices. One application of this method is phylogeographic research, which has long depended on large datasets that sample intensively from the geographic range of the focal species; these datasets allow systematicists to identify cryptic diversity and understand how contemporary and historical landscape forces influence genetic diversity. However, analyzing any large dataset can be computationally difficult, particularly when newly developed methods for species tree estimation are used. Here we explore the use of replicated subsampling, a potential solution to the problem posed by large datasets, with both a simulation study and an empirical analysis. In the simulations, we sample different numbers of alleles and loci, estimate species trees using STEM, and compare the estimated to the actual species tree. Our results indicate that subsampling three alleles per species for eight loci nearly always results in an accurate species tree topology, even in cases where the species tree was characterized by extremely rapid divergence. Even more modest subsampling effort, for example one allele per species and two loci, was more likely than not (>50%) to identify the correct species tree topology, indicating that in nearly all cases, computing the majority-rule consensus tree from replicated subsampling provides a good estimate of topology. These results were supported by estimating the correct species tree topology and reasonable branch lengths for an empirical 10-locus great ape dataset. Copyright © 2010 Elsevier Inc. All rights reserved.

Low host-tree preferences among saproxylic beetles : acomparison of four deciduous species

OpenAIRE

Milberg, Per; Bergman, Karl-Olof; Johansson, Helena; Jansson, Nicklas

2014-01-01

Many wood-dwelling beetles rely on old hollow trees. In Europe, oaks are known to harbour a species-rich saproxylic beetle fauna, while less is known regarding other broad-leaved tree species. Furthermore, the extent to which saproxylic insect species have specialised on different tree species remains unknown. In this study, we sampled beetles through pitfall traps and window traps in four different tree species in a landscape with many old oaks. We recorded 242 saproxylic beetle species of w...

Time Series of Images to Improve Tree Species Classification

Science.gov (United States)

Miyoshi, G. T.; Imai, N. N.; de Moraes, M. V. A.; Tommaselli, A. M. G.; Näsi, R.

2017-10-01

Tree species classification provides valuable information to forest monitoring and management. The high floristic variation of the tree species appears as a challenging issue in the tree species classification because the vegetation characteristics changes according to the season. To help to monitor this complex environment, the imaging spectroscopy has been largely applied since the development of miniaturized sensors attached to Unmanned Aerial Vehicles (UAV). Considering the seasonal changes in forests and the higher spectral and spatial resolution acquired with sensors attached to UAV, we present the use of time series of images to classify four tree species. The study area is an Atlantic Forest area located in the western part of São Paulo State. Images were acquired in August 2015 and August 2016, generating three data sets of images: only with the image spectra of 2015; only with the image spectra of 2016; with the layer stacking of images from 2015 and 2016. Four tree species were classified using Spectral angle mapper (SAM), Spectral information divergence (SID) and Random Forest (RF). The results showed that SAM and SID caused an overfitting of the data whereas RF showed better results and the use of the layer stacking improved the classification achieving a kappa coefficient of 18.26 %.

Provenance variation in subalpine fir grown as an exotic tree species in Denmark and Iceland

DEFF Research Database (Denmark)

Skúlason, Brynjar

Neonectria neomacrospora in Denmark. In Iceland the corkbark fir showed superior results, especially for survival rate and Christmas tree quality. The White River provenance from British Columbia is recommended for use in Denmark. The Mount Taylor provenance from the Cibola National Forest in New Mexico...... fir (A. lasiocarpa var. lasiocarpa) and corkbark fir (A. lasiocarpa var. arizonica (Merriam) Lemmon) was established at three sites in Denmark and at one site in Iceland in 1999. Adaptability, Christmas tree quality, growth rhythm and susceptibility to pests and pathogens were measured and assessed...... and the most spring frost damage on buds. The westernmost subalpine fir provenances from Washington state and British Columbia showed the overall best results in Denmark, with the highest survival (after 15 years), fastest height growth and highest Christmas tree quality and profitability, as well as both good...

Global variation in woodpecker species richness shaped by tree availability

DEFF Research Database (Denmark)

Ilsoe, Sigrid Kistrup; Kissling, W. Daniel; Fjeldsa, Jon

2017-01-01

. Location: Global. Methods: We used spatial and non-spatial regressions to test for relationships between broad-scale woodpecker species richness and predictor variables describing current and deep-time availability of trees, current climate, Quaternary climate change, human impact, topographical...... a negative indirect effect on woodpecker species richness. Main conclusions: Global species richness of woodpeckers is primarily shaped by current tree cover and precipitation, reflecting a strong biotic association between woodpeckers and trees. Human influence can have a negative effect on woodpecker....... As an example, woodpeckers (Picidae) are closely associated with trees and woody habitats because of multiple morphological and ecological specializations. In this study, we test whether this strong biotic association causes woodpecker diversity to be closely linked to tree availability at a global scale...

Exotic or not, leaf trait dissimilarity modulates the effect of dominant species on mixed litter decomposition

Czech Academy of Sciences Publication Activity Database

Finerty, G. E.; de Bello, Francesco; Bílá, Karolína; Berg, M. P.; Dias, A. T. C.; Pezzatti, G. B.; Moretti, M.

2016-01-01

Roč. 104, č. 5 (2016), s. 1400-1409 ISSN 0022-0477 R&D Projects: GA ČR GAP505/12/1296 Institutional support: RVO:67985939 ; RVO:67179843 Keywords : exotic species * invasion ecology * biodiversity effects on ecosystem s Subject RIV: EH - Ecology, Behaviour Impact factor: 5.813, year: 2016

The relationship between species diversity and genetic structure in the rare Picea chihuahuana tree species community, Mexico.

Science.gov (United States)

Simental-Rodríguez, Sergio Leonel; Quiñones-Pérez, Carmen Zulema; Moya, Daniel; Hernández-Tecles, Enrique; López-Sánchez, Carlos Antonio; Wehenkel, Christian

2014-01-01

Species diversity and genetic diversity, the most basic elements of biodiversity, have long been treated as separate topics, although populations evolve within a community context. Recent studies on community genetics and ecology have suggested that genetic diversity is not completely independent of species diversity. The Mexican Picea chihuahuana Martínez is an endemic species listed as "Endangered" on the Red List. Forty populations of Chihuahua spruce have been identified. This species is often associated with tree species of eight genera in gallery forests. This rare Picea chihuahuana tree community covers an area no more than 300 ha and has been subject of several studies involving different topics such as ecology, genetic structure and climate change. The overall aim of these studies was to obtain a dataset for developing management tools to help decision makers implement preservation and conservation strategies. However, this unique forest tree community may also represent an excellent subject for helping us to understand the interplay between ecological and evolutionary processes in determining community structure and dynamics. The AFLP technique and species composition data were used together to test the hypothesis that species diversity is related to the adaptive genetic structure of some dominant tree species (Picea chihuahuana, Pinus strobiformis, Pseudotsuga menziesii and Populus tremuloides) of the Picea chihuahuana tree community at fourteen locations. The Hill numbers were used as a diversity measure. The results revealed a significant correlation between tree species diversity and genetic structure in Populus tremuloides. Because the relationship between the two levels of diversity was found to be positive for the putative adaptive AFLP detected, genetic and species structures of the tree community were possibly simultaneously adapted to a combination of ecological or environmental factors. The present findings indicate that interactions between

Nest site selection in native and exotic trees by Black-chinned Hummingbirds

Science.gov (United States)

Deborah M. Finch; Jeffrey Kelly

2002-01-01

We studied nest site selection and nesting success in Black-chinned Hummingbirds (Archilochus alexandri) along the middle Rio Grande, New Mexico. The study was conducted in association with an exotic woody plant removal program to determine whether the removal of exotic plants would affect wildlife populations and nesting success, either positively or negatively. Point...

Tree species migration studies in the White Mountains of New Hampshire

Science.gov (United States)

William B. Leak; Mariko. Yamasaki

2012-01-01

The movement of tree species in either latitude or elevation has attracted increased recent attention due to growing national/international concerns over climate change. However, studies on tree species movements began in the early 1970s in the White Mountains of New Hampshire, mostly due to ecological interests in the episodic behavior of upper-elevation tree species...

Rapid detection of exotic Lymantriids and Scolytids pilot study

Science.gov (United States)

Mary Ellen Dix

2003-01-01

Exotic invasive species, inadvertently introduced into North America through importation and travel, are threatening the integrity of North American forest ecosystems. The National Invasive Species Council in their 2001 Strategic Plan identified a collaborative program for early detection, diagnosis and response to high-risk, exotic, invasive insects, pathogens and...

Urban tree species show the same hydraulic response to vapor pressure deficit across varying tree size and environmental conditions.

Directory of Open Access Journals (Sweden)

Lixin Chen

Full Text Available The functional convergence of tree transpiration has rarely been tested for tree species growing under urban conditions even though it is of significance to elucidate the relationship between functional convergence and species differences of urban trees for establishing sustainable urban forests in the context of forest water relations.We measured sap flux of four urban tree species including Cedrus deodara, Zelkova schneideriana, Euonymus bungeanus and Metasequoia glyptostroboides in an urban park by using thermal dissipation probes (TDP. The concurrent microclimate conditions and soil moisture content were also measured. Our objectives were to examine 1 the influence of tree species and size on transpiration, and 2 the hydraulic control of urban trees under different environmental conditions over the transpiration in response to VPD as represented by canopy conductance. The results showed that the functional convergence between tree diameter at breast height (DBH and tree canopy transpiration amount (E(c was not reliable to predict stand transpiration and there were species differences within same DBH class. Species differed in transpiration patterns to seasonal weather progression and soil water stress as a result of varied sensitivity to water availability. Species differences were also found in their potential maximum transpiration rate and reaction to light. However, a same theoretical hydraulic relationship between G(c at VPD = 1 kPa (G(cref and the G(c sensitivity to VPD (-dG(c/dlnVPD across studied species as well as under contrasting soil water and R(s conditions in the urban area.We concluded that urban trees show the same hydraulic regulation over response to VPD across varying tree size and environmental conditions and thus tree transpiration could be predicted with appropriate assessment of G(cref.

Urban tree species show the same hydraulic response to vapor pressure deficit across varying tree size and environmental conditions.

Science.gov (United States)

Chen, Lixin; Zhang, Zhiqiang; Ewers, Brent E

2012-01-01

The functional convergence of tree transpiration has rarely been tested for tree species growing under urban conditions even though it is of significance to elucidate the relationship between functional convergence and species differences of urban trees for establishing sustainable urban forests in the context of forest water relations. We measured sap flux of four urban tree species including Cedrus deodara, Zelkova schneideriana, Euonymus bungeanus and Metasequoia glyptostroboides in an urban park by using thermal dissipation probes (TDP). The concurrent microclimate conditions and soil moisture content were also measured. Our objectives were to examine 1) the influence of tree species and size on transpiration, and 2) the hydraulic control of urban trees under different environmental conditions over the transpiration in response to VPD as represented by canopy conductance. The results showed that the functional convergence between tree diameter at breast height (DBH) and tree canopy transpiration amount (E(c)) was not reliable to predict stand transpiration and there were species differences within same DBH class. Species differed in transpiration patterns to seasonal weather progression and soil water stress as a result of varied sensitivity to water availability. Species differences were also found in their potential maximum transpiration rate and reaction to light. However, a same theoretical hydraulic relationship between G(c) at VPD = 1 kPa (G(cref)) and the G(c) sensitivity to VPD (-dG(c)/dlnVPD) across studied species as well as under contrasting soil water and R(s) conditions in the urban area. We concluded that urban trees show the same hydraulic regulation over response to VPD across varying tree size and environmental conditions and thus tree transpiration could be predicted with appropriate assessment of G(cref).

Predicting invasion in grassland ecosystems: is exotic dominance the real embarrassment of richness?

Energy Technology Data Exchange (ETDEWEB)

Seabloom, Eric W. [Department of Ecology, Evolution, and Behavior, University of MN, St. Paul MN 55108 USA; Borer, Elizabeth T. [Department of Ecology, Evolution, and Behavior, University of MN, St. Paul MN 55108 USA; Buckley, Yvonne [ARC Centre of Excellence for Environmental Decisions, School of Biological Sciences, The University of Queensland, Brisbane Queensland 4072 Australia; Cleland, Elsa E. [Ecology, Behavior & Evolution Section, University of California, San Diego La Jolla CA 92093 USA; Davies, Kendi [Department of Ecology and Evolutionary Biology, University of Colorado, Boulder CO 80309 USA; Firn, Jennifer [Queensland University of Technology, Biogeosciences, Brisbane Queensland 4000 Australia; Harpole, W. Stanley [Department of Ecology, Evolution, and Organismal Biology, Iowa State University, Ames IA 50011 USA; Hautier, Yann [Department of Ecology, Evolution, and Behavior, University of MN, St. Paul MN 55108 USA; Institute of Evolutionary Biology and Environmental Studies, University of Zurich, Winterthurerstrasse 190 CH-8057 Zurich Switzerland; Lind, Eric [Department of Ecology, Evolution, and Behavior, University of MN, St. Paul MN 55108 USA; MacDougall, Andrew [Department of Integrative Biology, University of Guelph, Guelph Ontario N1G 2W1 Canada; Orrock, John L. [Department of Zoology, University of Wisconsin, Madison WI 53706 USA; Prober, Suzanne M. [CSIRO Ecosystem Sciences, Private Bag 5 Wembley WA 6913 Australia; Adler, Peter [Department of Wildland Resources and the Ecology Center, Utah State University, Logan UT 84322 USA; Alberti, Juan [Instituto de Investigaciones Marinas y Costeras (UNMdP-CONICET), Mar del Plata Argentina; Michael Anderson, T. [Department of Biology, Wake Forest University, Winston-Salem NC 27109 USA; Bakker, Jonathan D. [School of Environmental and Forest Sciences, University of Washington, Seattle WA 98195-4115 USA; Biederman, Lori A. [Department of Ecology, Evolution, and Organismal Biology, Iowa State University, Ames IA 50011 USA; Blumenthal, Dana [Rangeland Resources Research Unit, USDA Agricultural Research Service, Fort Collins CO 80526 USA; Brown, Cynthia S. [Department of Bioagricultural Sciences and Pest Management, Colorado State University, Fort Collins CO 80523 USA; Brudvig, Lars A. [Department of Plant Biology, Michigan State University, East Lansing MI 48824 USA; Caldeira, Maria [Centro de Estudos Florestais, Instituto Superior de Agronomia, Technical University of Lisbon, Lisbon Portugal; Chu, Chengjin [School of Life Sciences, Lanzhou University, Lanzhou 730000 China; Crawley, Michael J. [Department of Biology, Imperial College London, Silwood Park Ascot SL5 7PY UK; Daleo, Pedro [Instituto de Investigaciones Marinas y Costeras (UNMdP-CONICET), Mar del Plata Argentina; Damschen, Ellen I. [Department of Zoology, University of Wisconsin, Madison WI 53706 USA; D' Antonio, Carla M. [Department of Ecology, Evolution and Marine Biology, University of California, Santa Barbara CA 93106 USA; DeCrappeo, Nicole M. [U.S. Geological Survey Forest and Rangeland Ecosystem Science Center, Corvallis OR 97331 USA; Dickman, Chris R. [Desert Ecology Research Group, School of Biological Sciences, University of Sydney, Sydney NSW 2006 Australia; Du, Guozhen [School of Life Sciences, Lanzhou University, Lanzhou 730000 China; Fay, Philip A. [USDA-ARS Grassland Soil and Water Research Lab, Temple TX 76502 USA; Frater, Paul [Department of Ecology, Evolution, and Organismal Biology, Iowa State University, Ames IA 50011 USA; Gruner, Daniel S. [Department of Entomology, University of Maryland, College Park MD 20742 USA; Hagenah, Nicole [School of Life Sciences, University of KwaZulu-Natal, Scottsville Pietermaritzburg 3209 South Africa; Department of Ecology, Evolutionary Biology, Yale University, New Haven CT 06520 USA; Hector, Andrew [Institute of Evolutionary Biology and Environmental Studies, University of Zurich, Winterthurerstrasse 190 CH-8057 Zurich Switzerland; Helm, Aveliina [Institute of Ecology and Earth Sciences, University of Tartu, Tartu Estonia; Hillebrand, Helmut [Institute for Chemistry and Biology of the Marine Environment, Carl-von-Ossietzky University, Wilhelmshaven Germany; Hofmockel, Kirsten S. [Department of Ecology, Evolution, and Organismal Biology, Iowa State University, Ames IA 50011 USA; Humphries, Hope C. [INSTAAR, University of Colorado, Boulder CO 80309-0450 USA; Iribarne, Oscar [Instituto de Investigaciones Marinas y Costeras (UNMdP-CONICET), Mar del Plata Argentina; Jin, Virginia L. [USDA-ARS Agroecosystem Management Research Unit, Lincoln NE 68583 USA; Kay, Adam [Biology Department, University of St. Thomas, Saint Paul MN 55105 USA; Kirkman, Kevin P. [School of Life Sciences, University of KwaZulu-Natal, Scottsville Pietermaritzburg 3209 South Africa; Klein, Julia A. [Department Forest, Rangeland & Watershed Stewardship, Colorado State University, Fort Collins CO 80523-1472 USA; Knops, Johannes M. H. [School of Biological Sciences, University of Nebraska, Lincoln NE 68588 USA; La Pierre, Kimberly J. [Department of Ecology, Evolutionary Biology, Yale University, New Haven CT 06520 USA; Ladwig, Laura M. [Department of Biology, University of New Mexico, Albuquerque NM 87103 USA; Lambrinos, John G. [Department of Horticulture, Oregon State University, Corvallis OR 97331 USA; Leakey, Andrew D. B. [Department of Plant Biology and Institute for Genomic Biology, University of Illinois at Urbana-Champaign, Urbana IL 61801 USA; Li, Qi [Key Laboratory of Adaptation and Evolution of Plateau Biota, Northwest Institute of Plateau Biology, Chinese Academy of Sciences, Xining 810008 Qinghai China; Li, Wei [Yunnan Academy of Biodiversity, Southwest Forestry University, Kunming 650224 China; McCulley, Rebecca [Department of Plant & Soil Sciences, University of Kentucky, Lexington KY 40546 USA; Melbourne, Brett [Department of Ecology and Evolutionary Biology, University of Colorado, Boulder CO 80309 USA; Mitchell, Charles E. [Department of Biology, University of North Carolina, Chapel Hill NC 27599 USA; Moore, Joslin L. [Australian Research Centre for Urban Ecology, Melbourne, c/o School of Botany, University of Melbourne, Melbourne Victoria 3010 Australia; Morgan, John [Department of Botany, La Trobe University, Bundoora 3086 Victoria Australia; Mortensen, Brent [Department of Ecology, Evolution, and Organismal Biology, Iowa State University, Ames IA 50011 USA; O' Halloran, Lydia R. [Department of Zoology, Oregon State University, Corvallis OR 97331 USA; Pärtel, Meelis [Institute of Ecology and Earth Sciences, University of Tartu, Tartu Estonia; Pascual, Jesús [Instituto de Investigaciones Marinas y Costeras (UNMdP-CONICET), Mar del Plata Argentina; Pyke, David A. [U.S. Geological Survey Forest and Rangeland Ecosystem Science Center, Corvallis OR 97331 USA; Risch, Anita C. [Swiss Federal Institute for Forest, Snow and Landscape Research, 8903 Birmensdorf Switzerland; Salguero-Gómez, Roberto [ARC Centre of Excellence for Environmental Decisions, School of Biological Sciences, The University of Queensland, Brisbane Queensland 4072 Australia; Sankaran, Mahesh [National Centre for Biological Sciences, GKVK Campus, Bellary Road Bangalore 560065 India; Schuetz, Martin [Swiss Federal Institute for Forest, Snow and Landscape Research, 8903 Birmensdorf Switzerland; Simonsen, Anna [Department of Ecology & Evolutionary Biology, University of Toronto, Toronto ON M5S 3B2 Canada; Smith, Melinda [Department of Biology, Colorado State University, Fort Collins CO 80523 USA; Stevens, Carly [Lancaster Environment Center, Lancaster University, Lancaster LA1 4YQ UK; Sullivan, Lauren [Department of Ecology, Evolution, and Organismal Biology, Iowa State University, Ames IA 50011 USA; Wardle, Glenda M. [Desert Ecology Research Group, School of Biological Sciences, University of Sydney, Sydney NSW 2006 Australia; Wolkovich, Elizabeth M. [Biodiversity Research Centre, University of British Columbia, Vancouver V6T 1Z4 Canada; Wragg, Peter D. [Department of Ecology, Evolution, and Behavior, University of MN, St. Paul MN 55108 USA; Wright, Justin [Department of Biology, Duke University, Durham NC 27708 USA; Yang, Louie [Department of Entomology, University of California, Davis CA 95616 USA

2013-10-16

Invasions have increased the size of regional species pools, but are typically assumed to reduce native diversity. However, global-scale tests of this assumption have been elusive because of the focus on exotic species richness, rather than relative abundance. This is problematic because low invader richness can indicate invasion resistance by the native community or, alternatively, dominance by a single exotic species. Here, we used a globally replicated study to quantify relationships between exotic richness and abundance in grass-dominated ecosystems in 13 countries on six continents, ranging from salt marshes to alpine tundra. We tested effects of human land use, native community diversity, herbivore pressure, and nutrient limitation on exotic plant dominance. Despite its widespread use, exotic richness was a poor proxy for exotic dominance at low exotic richness, because sites that contained few exotic species ranged from relatively pristine (low exotic richness and cover) to almost completely exotic-dominated ones (low exotic richness but high exotic cover). Both exotic cover and richness were predicted by native plant diversity (native grass richness) and land use (distance to cultivation). Although climate was important for predicting both exotic cover and richness, climatic factors predicting cover (precipitation variability) differed from those predicting richness (maximum temperature and mean temperature in the wettest quarter). Herbivory and nutrient limitation did not predict exotic richness or cover. Exotic dominance was greatest in areas with low native grass richness at the site- or regional-scale. Although this could reflect native grass displacement, a lack of biotic resistance is a more likely explanation, given that grasses comprise the most aggressive invaders. These findings underscore the need to move beyond richness as a surrogate for the extent of invasion, because this metric confounds monodominance with invasion resistance. Monitoring

Region effects influence local tree species diversity.

Science.gov (United States)

Ricklefs, Robert E; He, Fangliang

2016-01-19

Global patterns of biodiversity reflect both regional and local processes, but the relative importance of local ecological limits to species coexistence, as influenced by the physical environment, in contrast to regional processes including species production, dispersal, and extinction, is poorly understood. Failure to distinguish regional influences from local effects has been due, in part, to sampling limitations at small scales, environmental heterogeneity within local or regional samples, and incomplete geographic sampling of species. Here, we use a global dataset comprising 47 forest plots to demonstrate significant region effects on diversity, beyond the influence of local climate, which together explain more than 92% of the global variation in local forest tree species richness. Significant region effects imply that large-scale processes shaping the regional diversity of forest trees exert influence down to the local scale, where they interact with local processes to determine the number of coexisting species.

Dust retaining properties of leaves of some tree species

Energy Technology Data Exchange (ETDEWEB)

Gusev, M I

1960-05-01

A study was made in Tashkent, Russia of the dust-retaining power of leaves of several tree species. Investigations were made in a park where these tree species were growing in close proximity, exposed to the effects of dust from the main city street and from the highway passing through the park. Observations on the dust-retaining power of leaves were made mostly during the summer and fall months. The dust-retaining power of leaves of different tree species varied with the dust concentration in the air. In the summer and fall when rains are scarce a steady accumulation of dust was observed on the surface of the leaves. 1 table.

Prospect of Milicia excelsa (Welw. C. Berg for Multi-Tree Species Agroforestry

Directory of Open Access Journals (Sweden)

Alfred Ossai Onefeli

2015-11-01

Full Text Available Background and Purpose: The population of most of our economically indigenous tree species in Nigeria is declining. Human activities and agricultural practices have been the ultimate contributors to this decrease. In order to ameliorate the conflict between agriculture and forestry, agroforestry was introduced. However, most of the practiced agroforestry is based on single tree species. Agroforestry practiced using single tree species have been reported to be ecologically staggered and therefore it is pertinent that phytosociology of trees with agroforestry potential is studied in order to improve the sustainability of human livelihood. Materials and Methods: This study was carried out in the University of Ibadan’s campus forest. The data were collected on Milicia excelsa (Welw. C. Berg by enumerating the tree species and also by identifying and enumerating the tree species associated with the subject tree (Milicia excelsa. Statistical analysis was done using percentages, Chi-square and charts. Results: A total of 49 individual Milicia excelsa were encountered in the study area. The results show 31 woody tree species associated with Milicia excelsa. Of all the associates Azadirachta indica A.Juss. happened to be the best one, having an average distance of 5.4 m to the subject tree. The sex ratio of Milicia excelsa was discovered to be approximately 1:1. Conclusions: Based on the obtained results of this research it may be concluded that Milicia excelsa has the prospect of being used in agroforestry in multi-tree species systems.

VOLUMETRY AND SURVIVAL OF NATIVE AND EXOTIC SPECIES IN THE GYPSUN POLE OF ARARIPE, PE

Directory of Open Access Journals (Sweden)

Bruno Coelho de Barros

2010-12-01

Full Text Available In the industrial and commercial sectors of the Araripe Region in Pernambuco, Brazil, fire wood is the used in processes of dehydration and production of gypsum with different technologies. Thus, this study aimed to find alternatives to supply the demand of firewood in the Gypsun Pole of Araripe in Pernambuco through the implementation of forest with native and exotic species. The experiment was installed at the Experimental Station of the Agronomic Institute of Pernambuco (IPA, using nine species, both native and exotic: (Imburana - Amburana cearense (Allemão A.C. Sm.; Angico - Anadenanthera colubrina (Vell. Brenan  var. cebil (Griseb. Altschul; Jurema - Mimosa tenuiflora (Willd. Poir.; Sabiá - Mimosa caesalpiniaefolia Benth.; Acácia - Senna siamea (Lam. H.S. Irwin & Barneby; Leucena - Leucaena leucocephala (Lam. R. de Wit.; Algaroba - Prosopis juliflora (Sw. D.C.; Ipês - Tabebuia sp.1 e Tabebuia sp.2. The design was completely randomized with different numbers of replications. The following parameters were evaluated: volume in cubic meter (m³ and stereo meters (st and survival. With regard to the volume in cubic meter, Sabia had the best production. The Jurema and the Sabiá were the heaviest species. In relation to survival, the Ipê 2 and the Imburana had the highest mortalities. Thus, the Sabiá and the Jurema are the species indicated for the production of wood in homogeneous commercial plantations in the Chapada Araripe in Pernambuco.

Remnant trees affect species composition but not structure of tropical second-growth forest.

Science.gov (United States)

Sandor, Manette E; Chazdon, Robin L

2014-01-01

Remnant trees, spared from cutting when tropical forests are cleared for agriculture or grazing, act as nuclei of forest regeneration following field abandonment. Previous studies on remnant trees were primarily conducted in active pasture or old fields abandoned in the previous 2-3 years, and focused on structure and species richness of regenerating forest, but not species composition. Our study is among the first to investigate the effects of remnant trees on neighborhood forest structure, biodiversity, and species composition 20 years post-abandonment. We compared the woody vegetation around individual remnant trees to nearby plots without remnant trees in the same second-growth forests ("control plots"). Forest structure beneath remnant trees did not differ significantly from control plots. Species richness and species diversity were significantly higher around remnant trees. The species composition around remnant trees differed significantly from control plots and more closely resembled the species composition of nearby old-growth forest. The proportion of old-growth specialists and generalists around remnant trees was significantly greater than in control plots. Although previous studies show that remnant trees may initially accelerate secondary forest growth, we found no evidence that they locally affect stem density, basal area, and seedling density at later stages of regrowth. Remnant trees do, however, have a clear effect on the species diversity, composition, and ecological groups of the surrounding woody vegetation, even after 20 years of forest regeneration. To accelerate the return of diversity and old-growth forest species into regrowing forest on abandoned land, landowners should be encouraged to retain remnant trees in agricultural or pastoral fields.

Tree species composition within Kano State University of science ...

African Journals Online (AJOL)

The study accessed the tree species composition within the Kano State University of Science and Technology Wudil, Kano State, Nigeria with the view of providing information that will help in the management and conservation of tree species within the campus. The study area was stratified into four (4) sections from which ...

Ethnobotanical survey of tree species used for wound healing in ...

African Journals Online (AJOL)

Seventy-one plants out of which sixty-five were tree species belonging to thirty angiosperm families were identified as plant species used for the treatment of wound and related skin disorders. Some of the most frequently used tree species mentioned by the respondents are: Khaya grandifoliola C. D. C., Vitellaria paradoxa ...

Species tree estimation for the late blight pathogen, Phytophthora infestans, and close relatives.

Science.gov (United States)

Blair, Jaime E; Coffey, Michael D; Martin, Frank N

2012-01-01

To better understand the evolutionary history of a group of organisms, an accurate estimate of the species phylogeny must be known. Traditionally, gene trees have served as a proxy for the species tree, although it was acknowledged early on that these trees represented different evolutionary processes. Discordances among gene trees and between the gene trees and the species tree are also expected in closely related species that have rapidly diverged, due to processes such as the incomplete sorting of ancestral polymorphisms. Recently, methods have been developed for the explicit estimation of species trees, using information from multilocus gene trees while accommodating heterogeneity among them. Here we have used three distinct approaches to estimate the species tree for five Phytophthora pathogens, including P. infestans, the causal agent of late blight disease in potato and tomato. Our concatenation-based "supergene" approach was unable to resolve relationships even with data from both the nuclear and mitochondrial genomes, and from multiple isolates per species. Our multispecies coalescent approach using both Bayesian and maximum likelihood methods was able to estimate a moderately supported species tree showing a close relationship among P. infestans, P. andina, and P. ipomoeae. The topology of the species tree was also identical to the dominant phylogenetic history estimated in our third approach, Bayesian concordance analysis. Our results support previous suggestions that P. andina is a hybrid species, with P. infestans representing one parental lineage. The other parental lineage is not known, but represents an independent evolutionary lineage more closely related to P. ipomoeae. While all five species likely originated in the New World, further study is needed to determine when and under what conditions this hybridization event may have occurred.

Seedling Growth Strategies in Bauhinia Species: Comparing Lianas and Trees

Science.gov (United States)

Cai, Zhi-Quan; Poorter, Lourens; Cao, Kun-Fang; Bongers, Frans

2007-01-01

Background and Aims Lianas are expected to differ from trees in their growth strategies. As a result these two groups of woody species will have different spatial distributions: lianas are more common in high light environments. This study determines the differences in growth patterns, biomass allocation and leaf traits in five closely related liana and tree species of the genus Bauhinia. Methods Seedlings of two light-demanding lianas (Bauhinia tenuiflora and B. claviflora), one shade-tolerant liana (B. aurea), and two light-demanding trees (B. purpurea and B. monandra) were grown in a shadehouse at 25 % of full sunlight. A range of physiological, morphological and biomass parameters at the leaf and whole plant level were compared among these five species. Key Results The two light-demanding liana species had higher relative growth rate (RGR), allocated more biomass to leaf production [higher leaf mass fraction (LMF) and higher leaf area ratio (LAR)] and stem mass fraction (SMF), and less biomass to the roots [root mass fraction (RMF)] than the two tree species. The shade-tolerant liana had the lowest RGR of all five species, and had a higher RMF, lower SMF and similar LMF than the two light-demanding liana species. The two light-demanding lianas had lower photosynthetic rates per unit area (Aarea) and similar photosynthetic rates per unit mass (Amass) than the trees. Across species, RGR was positively related to SLA, but not to LAR and Aarea. Conclusions It is concluded that the faster growth of light-demanding lianas compared with light-demanding trees is based on morphological parameters (SLA, LMF and LAR), and cannot be attributed to higher photosynthetic rates at the leaf level. The shade-tolerant liana exhibited a slow-growth strategy, compared with the light-demanding species. PMID:17720978

Species-level para- and polyphyly in DNA barcode gene trees

DEFF Research Database (Denmark)

Mutanen, Marko; Kivelä, Sami M.; Vos, Rutger A.

2016-01-01

was paid to accurate species identification to ensure data integrity. We investigated the effects of tree-building method, sampling effort, and other methodological issues, all of which can influence estimates of non-monophyly. We found a 12% incidence of non-monophyly, a value significantly lower than...... between species and gene genealogies, as indicated by situations where conspecific individuals do not form a monophyletic cluster in a gene tree. In two previous reviews, non-monophyly has been reported as being common in mitochondrial DNA gene trees. We developed a novel web service "Monophylizer......" to detect non-monophyly in phylogenetic trees and used it to ascertain the incidence of species non-monophyly in COI (a.k.a. cox1) barcode sequence data from 4977 species and 41,583 specimens of European Lepidoptera, the largest data set of DNA barcodes analyzed from this regard. Particular attention...

Use of Hardwood Tree Species by Birds Nesting in Ponderosa Pine Forests

Science.gov (United States)

Kathryn L. Purcell; Douglas A. Drynan

2008-01-01

We examined the use of hardwood tree species for nesting by bird species breeding in ponderosa pine (Pinus ponderosa) forests in the Sierra National Forest, California. From 1995 through 2002, we located 668 nests of 36 bird species nesting in trees and snags on four 60-ha study sites. Two-thirds of all species nesting in trees or snags used...

Invasive exotic plants in the tropical Pacific Islands: Patterns of Diversity

Science.gov (United States)

J.S. Denslow; J.C. Space; P.A. Thomas

2009-01-01

Oceanic islands are good model systems with which to explore factors affecting exotic species diversity. Islands vary in size, topography, substrate type, degree of isolation, native species diversity, history, human population characteristics, and economic development. Moreover, islands are highly vulnerable to exotic species establishment. We used AICc analyses of...

The hydrological vulnerability of western North American boreal tree species based on ground-based observations of tree mortality

Science.gov (United States)

Hember, R. A.; Kurz, W. A.; Coops, N. C.

2017-12-01

Several studies indicate that climate change has increased rates of tree mortality, adversely affecting timber supply and carbon storage in western North American boreal forests. Statistical models of tree mortality can play a complimentary role in detecting and diagnosing forest change. Yet, such models struggle to address real-world complexity, including expectations that hydrological vulnerability arises from both drought stress and excess-water stress, and that these effects vary by species, tree size, and competitive status. Here, we describe models that predict annual probability of tree mortality (Pm) of common boreal tree species based on tree height (H), biomass of larger trees (BLT), soil water content (W), reference evapotranspiration (E), and two-way interactions. We show that interactions among H and hydrological variables are consistently significant. Vulnerability to extreme droughts consistently increases as H approaches maximum observed values of each species, while some species additionally show increasing vulnerability at low H. Some species additionally show increasing vulnerability to low W under high BLT, or increasing drought vulnerability under low BLT. These results suggest that vulnerability of trees to increasingly severe droughts depends on the hydraulic efficiency, competitive status, and microclimate of individual trees. Static simulations of Pm across a 1-km grid (i.e., with time-independent inputs of H, BLT, and species composition) indicate complex spatial patterns in the time trends during 1965-2014 and a mean change in Pm of 42 %. Lastly, we discuss how the size-dependence of hydrological vulnerability, in concert with increasingly severe drought events, may shape future responses of stand-level biomass production to continued warming and increasing carbon dioxide concentration in the region.

Multilocus inference of species trees and DNA barcoding.

Science.gov (United States)

Mallo, Diego; Posada, David

2016-09-05

The unprecedented amount of data resulting from next-generation sequencing has opened a new era in phylogenetic estimation. Although large datasets should, in theory, increase phylogenetic resolution, massive, multilocus datasets have uncovered a great deal of phylogenetic incongruence among different genomic regions, due both to stochastic error and to the action of different evolutionary process such as incomplete lineage sorting, gene duplication and loss and horizontal gene transfer. This incongruence violates one of the fundamental assumptions of the DNA barcoding approach, which assumes that gene history and species history are identical. In this review, we explain some of the most important challenges we will have to face to reconstruct the history of species, and the advantages and disadvantages of different strategies for the phylogenetic analysis of multilocus data. In particular, we describe the evolutionary events that can generate species tree-gene tree discordance, compare the most popular methods for species tree reconstruction, highlight the challenges we need to face when using them and discuss their potential utility in barcoding. Current barcoding methods sacrifice a great amount of statistical power by only considering one locus, and a transition to multilocus barcodes would not only improve current barcoding methods, but also facilitate an eventual transition to species-tree-based barcoding strategies, which could better accommodate scenarios where the barcode gap is too small or inexistent.This article is part of the themed issue 'From DNA barcodes to biomes'. © 2016 The Authors.

Species tree estimation for the late blight pathogen, Phytophthora infestans, and close relatives.

Directory of Open Access Journals (Sweden)

Jaime E Blair

Full Text Available To better understand the evolutionary history of a group of organisms, an accurate estimate of the species phylogeny must be known. Traditionally, gene trees have served as a proxy for the species tree, although it was acknowledged early on that these trees represented different evolutionary processes. Discordances among gene trees and between the gene trees and the species tree are also expected in closely related species that have rapidly diverged, due to processes such as the incomplete sorting of ancestral polymorphisms. Recently, methods have been developed for the explicit estimation of species trees, using information from multilocus gene trees while accommodating heterogeneity among them. Here we have used three distinct approaches to estimate the species tree for five Phytophthora pathogens, including P. infestans, the causal agent of late blight disease in potato and tomato. Our concatenation-based "supergene" approach was unable to resolve relationships even with data from both the nuclear and mitochondrial genomes, and from multiple isolates per species. Our multispecies coalescent approach using both Bayesian and maximum likelihood methods was able to estimate a moderately supported species tree showing a close relationship among P. infestans, P. andina, and P. ipomoeae. The topology of the species tree was also identical to the dominant phylogenetic history estimated in our third approach, Bayesian concordance analysis. Our results support previous suggestions that P. andina is a hybrid species, with P. infestans representing one parental lineage. The other parental lineage is not known, but represents an independent evolutionary lineage more closely related to P. ipomoeae. While all five species likely originated in the New World, further study is needed to determine when and under what conditions this hybridization event may have occurred.

Why abundant tropical tree species are phylogenetically old.

Science.gov (United States)

Wang, Shaopeng; Chen, Anping; Fang, Jingyun; Pacala, Stephen W

2013-10-01

Neutral models of species diversity predict patterns of abundance for communities in which all individuals are ecologically equivalent. These models were originally developed for Panamanian trees and successfully reproduce observed distributions of abundance. Neutral models also make macroevolutionary predictions that have rarely been evaluated or tested. Here we show that neutral models predict a humped or flat relationship between species age and population size. In contrast, ages and abundances of tree species in the Panamanian Canal watershed are found to be positively correlated, which falsifies the models. Speciation rates vary among phylogenetic lineages and are partially heritable from mother to daughter species. Variable speciation rates in an otherwise neutral model lead to a demographic advantage for species with low speciation rate. This demographic advantage results in a positive correlation between species age and abundance, as found in the Panamanian tropical forest community.

Hierarchical Learning of Tree Classifiers for Large-Scale Plant Species Identification.

Science.gov (United States)

Fan, Jianping; Zhou, Ning; Peng, Jinye; Gao, Ling

2015-11-01

In this paper, a hierarchical multi-task structural learning algorithm is developed to support large-scale plant species identification, where a visual tree is constructed for organizing large numbers of plant species in a coarse-to-fine fashion and determining the inter-related learning tasks automatically. For a given parent node on the visual tree, it contains a set of sibling coarse-grained categories of plant species or sibling fine-grained plant species, and a multi-task structural learning algorithm is developed to train their inter-related classifiers jointly for enhancing their discrimination power. The inter-level relationship constraint, e.g., a plant image must first be assigned to a parent node (high-level non-leaf node) correctly if it can further be assigned to the most relevant child node (low-level non-leaf node or leaf node) on the visual tree, is formally defined and leveraged to learn more discriminative tree classifiers over the visual tree. Our experimental results have demonstrated the effectiveness of our hierarchical multi-task structural learning algorithm on training more discriminative tree classifiers for large-scale plant species identification.

Important LiDAR metrics for discriminating forest tree species in Central Europe

Science.gov (United States)

Shi, Yifang; Wang, Tiejun; Skidmore, Andrew K.; Heurich, Marco

2018-03-01

Numerous airborne LiDAR-derived metrics have been proposed for classifying tree species. Yet an in-depth ecological and biological understanding of the significance of these metrics for tree species mapping remains largely unexplored. In this paper, we evaluated the performance of 37 frequently used LiDAR metrics derived under leaf-on and leaf-off conditions, respectively, for discriminating six different tree species in a natural forest in Germany. We firstly assessed the correlation between these metrics. Then we applied a Random Forest algorithm to classify the tree species and evaluated the importance of the LiDAR metrics. Finally, we identified the most important LiDAR metrics and tested their robustness and transferability. Our results indicated that about 60% of LiDAR metrics were highly correlated to each other (|r| > 0.7). There was no statistically significant difference in tree species mapping accuracy between the use of leaf-on and leaf-off LiDAR metrics. However, combining leaf-on and leaf-off LiDAR metrics significantly increased the overall accuracy from 58.2% (leaf-on) and 62.0% (leaf-off) to 66.5% as well as the kappa coefficient from 0.47 (leaf-on) and 0.51 (leaf-off) to 0.58. Radiometric features, especially intensity related metrics, provided more consistent and significant contributions than geometric features for tree species discrimination. Specifically, the mean intensity of first-or-single returns as well as the mean value of echo width were identified as the most robust LiDAR metrics for tree species discrimination. These results indicate that metrics derived from airborne LiDAR data, especially radiometric metrics, can aid in discriminating tree species in a mixed temperate forest, and represent candidate metrics for tree species classification and monitoring in Central Europe.

Are Mixed Tropical Tree Plantations More Resistant to Drought than Monocultures?

Directory of Open Access Journals (Sweden)

Norbert Kunert

2015-06-01

Full Text Available Tropical tree plantations usually consist of a single exotic fast growing species, but recent research describes positive effects on ecosystem functions from mixed tropical tree plantations. In this review, we present the current knowledge of drought resistance of tropical mixed species plantations and summarize preliminary evidence from a tree biodiversity experiment in Panama. Converting mono-specific stands into mixed ones may improve stand stability and might reduce increasing abiotic and biotic disturbances due to climate change. However, little is known about the extent to which tropical tree species or tropical tree communities can resist increasing disturbances in the short term, e.g., water limitations due to increasing dry season intensity or length, or about their resilience after such disturbances and their capacity to adapt to changing conditions in the long term. Studies relating drought resistance and resilience to community diversity are missing. Further, we highlight the urgent need for a multifactorial manipulative throughfall reduction experiment in tropical environments. The outcome of such studies would greatly assist the forestry sector in tropical regions to maintain highly productive and ecologically sound forest plantations in a changing climate.

Seasonal variation in radiocesium concentrations in three tree species

International Nuclear Information System (INIS)

Garten, C.R. Jr.; Briese, L.A.; Sharitz, R.R.; Gentry, J.B.

1975-01-01

Radiocesium concentrations in leaves and stems of black willow (Salix nigra), wax myrtle (Myrica cerifera), and tag alder (Alnus serrulata) trees inhabiting a floodplain contaminated by production-reactor effluents were measured over 1 year. In willow and myrtle trees, leaf radiocesium levels were highest in the spring and declined during the growing season; stem levels remained relatively unchanged or exhibited a slight increase. Seasonal changes in alder tree parts depended on the site examined. The relationship among component parts was essentially consistent across species and collecting sites in the summer. The radiocesium concentrations in order of rank were: roots greater than or equal to leaves greater than stems. Species differences in component-part radiocesium levels were dependent on the part sampled and the collecting site examined. Mean soil to plant-part concentration factors in summer ranged from 0.9 to 7.6, and species means across leaves, stems, and roots averaged 2.1, 3.8, and 6.2 for alder, willow, and myrtle trees, respectively

Growth strategies of tropical tree species: disentangling light and size effects.

Directory of Open Access Journals (Sweden)

Nadja Rüger

Full Text Available An understanding of the drivers of tree growth at the species level is required to predict likely changes of carbon stocks and biodiversity when environmental conditions change. Especially in species-rich tropical forests, it is largely unknown how species differ in their response of growth to resource availability and individual size. We use a hierarchical bayesian approach to quantify the impact of light availability and tree diameter on growth of 274 woody species in a 50-ha long-term forest census plot in Barro Colorado Island, Panama. Light reaching each individual tree was estimated from yearly vertical censuses of canopy density. The hierarchical bayesian approach allowed accounting for different sources of error, such as negative growth observations, and including rare species correctly weighted by their abundance. All species grew faster at higher light. Exponents of a power function relating growth to light were mostly between 0 and 1. This indicates that nearly all species exhibit a decelerating increase of growth with light. In contrast, estimated growth rates at standardized conditions (5 cm dbh, 5% light varied over a 9-fold range and reflect strong growth-strategy differentiation between the species. As a consequence, growth rankings of the species at low (2% and high light (20% were highly correlated. Rare species tended to grow faster and showed a greater sensitivity to light than abundant species. Overall, tree size was less important for growth than light and about half the species were predicted to grow faster in diameter when bigger or smaller, respectively. Together light availability and tree diameter only explained on average 12% of the variation in growth rates. Thus, other factors such as soil characteristics, herbivory, or pathogens may contribute considerably to shaping tree growth in the tropics.

Fuelwood quality of promising tree species for alkaline soil sites in relation to tree age

Energy Technology Data Exchange (ETDEWEB)

Goel, V.L.; Behl, H.M. [National Botanical Research Inst., Lucknow (India). Biomass Research Center

1996-06-01

The fuelwood quality of five tree species suitable for afforestation of alkaline soil sites was investigated in relation to tree age for establishing harvest rotation cycles. Prosopis juliflora and Acacia nilotica were found to be the most suitable species for short rotation fuel wood forestry programmes because of their high wood density, biomass yield, low ash and moisture content, and good heat of combustion at the juvenile stage. The performance of other species like Acacia auriculiformis, Terminalia arjuna and Sesbania formosa is discussed. (author)

Biological observations for invasive and exotic insect species Anoplophora chinensis (Forster, 1771

Directory of Open Access Journals (Sweden)

Erdem Hizal

2017-11-01

Full Text Available In recent years, invasive and exotic insect species have been frequently found in Turkey. Anoplophora chinensis (Forster, 1771 was first recorded in Şile (Istanbul province county, Turkey, in June 2014 and later in Zeytinburnu (the garden of the Abdi Ipekçi Sports Complex and the surrounding in July in the same year. This study was conducted in these two counties in particular between June 2014 and July 2016 with the aims of making remarks on an earlier misidentification of Anoplophora species and determining the life cycle and the host plants in Istanbul, Turkey. It was noted that the record of A. glabripennis in Istanbul was a misidentification of A. chinensis. It took 1 year to complete its generation. The primary host plant of this insect was found to be Acer negundo.

Selective logging in tropical forests decreases the robustness of liana-tree interaction networks to the loss of host tree species.

Science.gov (United States)

Magrach, Ainhoa; Senior, Rebecca A; Rogers, Andrew; Nurdin, Deddy; Benedick, Suzan; Laurance, William F; Santamaria, Luis; Edwards, David P

2016-03-16

Selective logging is one of the major drivers of tropical forest degradation, causing important shifts in species composition. Whether such changes modify interactions between species and the networks in which they are embedded remain fundamental questions to assess the 'health' and ecosystem functionality of logged forests. We focus on interactions between lianas and their tree hosts within primary and selectively logged forests in the biodiversity hotspot of Malaysian Borneo. We found that lianas were more abundant, had higher species richness, and different species compositions in logged than in primary forests. Logged forests showed heavier liana loads disparately affecting slow-growing tree species, which could exacerbate the loss of timber value and carbon storage already associated with logging. Moreover, simulation scenarios of host tree local species loss indicated that logging might decrease the robustness of liana-tree interaction networks if heavily infested trees (i.e. the most connected ones) were more likely to disappear. This effect is partially mitigated in the short term by the colonization of host trees by a greater diversity of liana species within logged forests, yet this might not compensate for the loss of preferred tree hosts in the long term. As a consequence, species interaction networks may show a lagged response to disturbance, which may trigger sudden collapses in species richness and ecosystem function in response to additional disturbances, representing a new type of 'extinction debt'. © 2016 The Author(s).

Selective logging in tropical forests decreases the robustness of liana–tree interaction networks to the loss of host tree species

Science.gov (United States)

Magrach, Ainhoa; Senior, Rebecca A.; Rogers, Andrew; Nurdin, Deddy; Benedick, Suzan; Laurance, William F.; Santamaria, Luis; Edwards, David P.

2016-01-01

Selective logging is one of the major drivers of tropical forest degradation, causing important shifts in species composition. Whether such changes modify interactions between species and the networks in which they are embedded remain fundamental questions to assess the ‘health’ and ecosystem functionality of logged forests. We focus on interactions between lianas and their tree hosts within primary and selectively logged forests in the biodiversity hotspot of Malaysian Borneo. We found that lianas were more abundant, had higher species richness, and different species compositions in logged than in primary forests. Logged forests showed heavier liana loads disparately affecting slow-growing tree species, which could exacerbate the loss of timber value and carbon storage already associated with logging. Moreover, simulation scenarios of host tree local species loss indicated that logging might decrease the robustness of liana–tree interaction networks if heavily infested trees (i.e. the most connected ones) were more likely to disappear. This effect is partially mitigated in the short term by the colonization of host trees by a greater diversity of liana species within logged forests, yet this might not compensate for the loss of preferred tree hosts in the long term. As a consequence, species interaction networks may show a lagged response to disturbance, which may trigger sudden collapses in species richness and ecosystem function in response to additional disturbances, representing a new type of ‘extinction debt’. PMID:26936241

Diversity patterns and composition of native and exotic floras in central Chile

Science.gov (United States)

Figueroa, Javier A.; Teillier, Sebastián; Castro, Sergio A.

2011-03-01

Floristic changes in the Mediterranean region of central Chile brought about by human impact appear to be shared with other climatic regions, although there is a notable absence of empirical studies and available quantitative evidence for the central Chile region. This study examines the cover, richness and composition of native and exotic plant species in a representative area of central Chile. Through floristic characterization of 33 sites sampled using 40 × 40 m plots distributed along transect on which the two farthest sites were separated by 50 km, the floristic richness and cover patterns, as well as the general land use characteristics were evaluated (native matorral, espinal, abandoned farming field, forest plantations, periurban sites, road sites, river bank, and burnt site). We recorded 327 species of plants; 213 species were native and 114 were exotic. The average number of species was heterogeneous in all sites, showing a greater relative native frequency in those sites with a lower level of anthropic intervention. Except for the matorral, the cover of exotic species was greater than that of native species. No relation was found between richness and cover in relation to the different types of land use. The relationship between cover of native and exotic was negative, although for richness did not show relationship. Results show that the exotic species are limited by resources, although they have not completely displaced the native species. The native and exotic floras respond to different spatial distribution patterns, so their presence makes it possible to establish two facts rarely quantified in central Chile: first, that the exotic flora replaces (but does not necessarily displace) the native flora, and second, that at the same time, because of its greater geographic ubiquity and the abundance levels that it achieves, it contributes to the taxonomic and physiognomic homogenization of central Chile.

Vulnerability of native savanna trees and exotic Khaya senegalensis to seasonal drought.

Science.gov (United States)

Arndt, Stefan K; Sanders, Gregor J; Bristow, Mila; Hutley, Lindsay B; Beringer, Jason; Livesley, Stephen J

2015-07-01

Seasonally dry ecosystems present a challenge to plants to maintain water relations. While native vegetation in seasonally dry ecosystems have evolved specific adaptations to the long dry season, there are risks to introduced exotic species. African mahogany, Khaya senegalensis Desr. (A. Juss.), is an exotic plantation species that has been introduced widely in Asia and northern Australia, but it is unknown if it has the physiological or phenotypic plasticity to cope with the strongly seasonal patterns of water availability in the tropical savanna climate of northern Australia. We investigated the gas exchange and water relations traits and adjustments to seasonal drought in K. senegalensis and native eucalypts (Eucalyptus tetrodonta F. Muell. and Corymbia latifolia F. Muell.) in a savanna ecosystem in northern Australia. The native eucalypts did not exhibit any signs of drought stress after 3 months of no rainfall and probably had access to deeper soil moisture late into the dry season. Leaf water potential, stomatal conductance, transpiration and photosynthesis all remained high in the dry season but osmotic adjustment was not observed. Overstorey leaf area index (LAI) was 0.6 in the native eucalypt savanna and did not change between wet and dry seasons. In contrast, the K. senegalensis plantation in the wet season was characterized by a high water potential, high stomatal conductance and transpiration and a high LAI of 2.4. In the dry season, K. senegalensis experienced mild drought stress with a predawn water potential -0.6 MPa. Overstorey LAI was halved, and stomatal conductance and transpiration drastically reduced, while minimum leaf water potentials did not change (-2 MPa) and no osmotic adjustment occurred. Khaya senegalensis exhibited an isohydric behaviour and also had a lower hydraulic vulnerability to cavitation in leaves, with a P50 of -2.3 MPa. The native eucalypts had twice the maximum leaf hydraulic conductance but a much higher P50 of -1.5 MPa

Effects of species biological traits and environmental heterogeneity on simulated tree species distribution shifts under climate change.

Science.gov (United States)

Wang, Wen J; He, Hong S; Thompson, Frank R; Spetich, Martin A; Fraser, Jacob S

2018-09-01

Demographic processes (fecundity, dispersal, colonization, growth, and mortality) and their interactions with environmental changes are not well represented in current climate-distribution models (e.g., niche and biophysical process models) and constitute a large uncertainty in projections of future tree species distribution shifts. We investigate how species biological traits and environmental heterogeneity affect species distribution shifts. We used a species-specific, spatially explicit forest dynamic model LANDIS PRO, which incorporates site-scale tree species demography and competition, landscape-scale dispersal and disturbances, and regional-scale abiotic controls, to simulate the distribution shifts of four representative tree species with distinct biological traits in the central hardwood forest region of United States. Our results suggested that biological traits (e.g., dispersal capacity, maturation age) were important for determining tree species distribution shifts. Environmental heterogeneity, on average, reduced shift rates by 8% compared to perfect environmental conditions. The average distribution shift rates ranged from 24 to 200myear -1 under climate change scenarios, implying that many tree species may not able to keep up with climate change because of limited dispersal capacity, long generation time, and environmental heterogeneity. We suggest that climate-distribution models should include species demographic processes (e.g., fecundity, dispersal, colonization), biological traits (e.g., dispersal capacity, maturation age), and environmental heterogeneity (e.g., habitat fragmentation) to improve future predictions of species distribution shifts in response to changing climates. Copyright © 2018 Elsevier B.V. All rights reserved.

Exotic species with explicit noble metal-noble gas-noble metal linkages.

Science.gov (United States)

Moreno, Norberto; Restrepo, Albeiro; Hadad, C Z

2018-02-14

We present a study of the isoelectronic Pt 2 Ng 2 F 4 and [Au 2 Ng 2 F 4 ] 2+ species with noble gas atoms (Ng = Kr, Xe, Rn) acting as links bridging the two noble metal atoms. The stability of the species is investigated using several thermodynamic, kinetic and reactivity indicators. The results are compared against [AuXe 4 ] 2+ , which is thermodynamically unstable in the gas phase but is stabilized in the solid state to the point that it has been experimentally detected as [AuXe 4 ](Sb 2 F 11 ) 2 (S. Seidel and K. Seppelt, Science, 2000, 290, 117-118). Our results indicate that improving upon [AuXe 4 ] 2+ , these exotic combinations between the a priori non-reactive noble metals and noble gases lead to metastable species, and, therefore, they have the possibility of existing in the solid state under adequate conditions. Our calculations include accurate energies and geometries at both the CCSD/SDDALL and MP2/SDDALL levels. We offer a detailed description of the nature of the bonding interactions using orbital and density-based analyses. The computational evidence suggests partially covalent and ionic interactions as the stabilization factors.

Species divergence and phylogenetic variation of ecophysiological traits in lianas and trees.

Science.gov (United States)

Rios, Rodrigo S; Salgado-Luarte, Cristian; Gianoli, Ernesto

2014-01-01

The climbing habit is an evolutionary key innovation in plants because it is associated with enhanced clade diversification. We tested whether patterns of species divergence and variation of three ecophysiological traits that are fundamental for plant adaptation to light environments (maximum photosynthetic rate [A(max)], dark respiration rate [R(d)], and specific leaf area [SLA]) are consistent with this key innovation. Using data reported from four tropical forests and three temperate forests, we compared phylogenetic distance among species as well as the evolutionary rate, phylogenetic distance and phylogenetic signal of those traits in lianas and trees. Estimates of evolutionary rates showed that R(d) evolved faster in lianas, while SLA evolved faster in trees. The mean phylogenetic distance was 1.2 times greater among liana species than among tree species. Likewise, estimates of phylogenetic distance indicated that lianas were less related than by chance alone (phylogenetic evenness across 63 species), and trees were more related than expected by chance (phylogenetic clustering across 71 species). Lianas showed evenness for R(d), while trees showed phylogenetic clustering for this trait. In contrast, for SLA, lianas exhibited phylogenetic clustering and trees showed phylogenetic evenness. Lianas and trees showed patterns of ecophysiological trait variation among species that were independent of phylogenetic relatedness. We found support for the expected pattern of greater species divergence in lianas, but did not find consistent patterns regarding ecophysiological trait evolution and divergence. R(d) followed the species-level pattern, i.e., greater divergence/evolution in lianas compared to trees, while the opposite occurred for SLA and no pattern was detected for A(max). R(d) may have driven lianas' divergence across forest environments, and might contribute to diversification in climber clades.

Rates of spontaneous hybridization and hybrid recruitment in co-existing exotic and native mature larch populations

NARCIS (Netherlands)

Meirmans, P.G.; Gros-Louis, M.C.; Lamothe, M.; Perron, M; Bousquet, J.; Isabel, N.

2014-01-01

Exotic larch (Larix decidua Mill., Larix kaempferi (Lamb.) Carr. and Larix sibirica Ledeb.) and their hybrids have been introduced into Canada to test adaptation and growth for reforestation purposes. For tree breeding opera- tions, provenance trials and seed orchards of exotic larches and their

Multipurpose fodder trees in Ethiopia : farmers'perception, constraints to adoption and effect of long-term supplementation on sheep performance

OpenAIRE

Mekoya, A.

2008-01-01

Many organizations in Ethiopia have promoted exotic multipurpose fodder tree species particularly Sesbania sesban for livestock feed and soil improvement. Despite the apparent benefits, the number of farmers planting these trees was low. Moreover, some farmers feeding Sesbania sesban reported reproduction problems in sheep. The latter was supported by a few short term reproduction studies conducted in Ethiopia. The present thesis was conducted to assess farmers’ perceptions about multipurpose...

TimeTree2: species divergence times on the iPhone.

Science.gov (United States)

Kumar, Sudhir; Hedges, S Blair

2011-07-15

Scientists, educators and the general public often need to know times of divergence between species. But they rarely can locate that information because it is buried in the scientific literature, usually in a format that is inaccessible to text search engines. We have developed a public knowledgebase that enables data-driven access to the collection of peer-reviewed publications in molecular evolution and phylogenetics that have reported estimates of time of divergence between species. Users can query the TimeTree resource by providing two names of organisms (common or scientific) that can correspond to species or groups of species. The current TimeTree web resource (TimeTree2) contains timetrees reported from molecular clock analyses in 910 published studies and 17 341 species that span the diversity of life. TimeTree2 interprets complex and hierarchical data from these studies for each user query, which can be launched using an iPhone application, in addition to the website. Published time estimates are now readily accessible to the scientific community, K-12 and college educators, and the general public, without requiring knowledge of evolutionary nomenclature. TimeTree2 is accessible from the URL http://www.timetree.org, with an iPhone app available from iTunes (http://itunes.apple.com/us/app/timetree/id372842500?mt=8) and a YouTube tutorial (http://www.youtube.com/watch?v=CxmshZQciwo).

Ability of a Generalist Seed Beetle to Colonize an Exotic Host: Effects of Host Plant Origin and Oviposition Host.

Science.gov (United States)

Amarillo-Suárez, A; Repizo, A; Robles, J; Diaz, J; Bustamante, S

2017-08-01

The colonization of an exotic species by native herbivores is more likely to occur if that herbivore is a generalist. There is little information on the life-history mechanisms used by native generalist insects to colonize exotic hosts and how these mechanisms are affected by host properties. We examined the ability of the generalist seed beetle Stator limbatus Horn to colonize an exotic species. We compared its host preference, acceptability, performance, and egg size when ovipositing and developing on two native (Pithecellobium dulce (Roxb.) Benth and Senegalia riparia (Kunth)) and one exotic legume species (Leucaena leucocephala (Lam.)). We also analyzed the seed chemistry. We found that females recognize the exotic species as an unfavorable host for larval development and that they delayed oviposition and laid fewer and larger eggs on the exotic species than on the native species. Survivorship on the exotic host was 0%. Additionally, seeds of the native species contain five chemical compounds that are absent in the exotic species, and the exotic species contains three sterols, which are absent in the native legumes. Genetically based differences between beetles adapted to different hosts, plastic responses toward new hosts, and chemical differences among seeds are important in host colonization and recognition of the exotic host. In conclusion, the generalist nature of S. limbatus does not influence its ability to colonize L. leucocephala. Explanations for the colonization of exotic hosts by generalist native species and for the success of invasive species must be complemented with studies measuring local adaptation and plasticity.

A review of impacts by invasive exotic plants on forest ecosystem services

Science.gov (United States)

Kevin Devine; Songlin. Fei

2011-01-01

Many of our forest ecosystems are at risk due to the invasion of exotic invasive plant species. Invasive plant species pose numerous threats to ecosystems by decreasing biodiversity, deteriorating ecosystem processes, and degrading ecosystem services. Literature on Kentucky's most invasive exotic plant species was examined to understand their potential impacts on...

Estimating tree species diversity in the savannah using NDVI and woody canopy cover

Science.gov (United States)

Madonsela, Sabelo; Cho, Moses Azong; Ramoelo, Abel; Mutanga, Onisimo; Naidoo, Laven

2018-04-01

Remote sensing applications in biodiversity research often rely on the establishment of relationships between spectral information from the image and tree species diversity measured in the field. Most studies have used normalized difference vegetation index (NDVI) to estimate tree species diversity on the basis that it is sensitive to primary productivity which defines spatial variation in plant diversity. The NDVI signal is influenced by photosynthetically active vegetation which, in the savannah, includes woody canopy foliage and grasses. The question is whether the relationship between NDVI and tree species diversity in the savanna depends on the woody cover percentage. This study explored the relationship between woody canopy cover (WCC) and tree species diversity in the savannah woodland of southern Africa and also investigated whether there is a significant interaction between seasonal NDVI and WCC in the factorial model when estimating tree species diversity. To fulfil our aim, we followed stratified random sampling approach and surveyed tree species in 68 plots of 90 m × 90 m across the study area. Within each plot, all trees with diameter at breast height of >10 cm were sampled and Shannon index - a common measure of species diversity which considers both species richness and abundance - was used to quantify tree species diversity. We then extracted WCC in each plot from existing fractional woody cover product produced from Synthetic Aperture Radar (SAR) data. Factorial regression model was used to determine the interaction effect between NDVI and WCC when estimating tree species diversity. Results from regression analysis showed that (i) WCC has a highly significant relationship with tree species diversity (r2 = 0.21; p NDVI and WCC is not significant, however, the factorial model significantly reduced the error of prediction (RMSE = 0.47, p NDVI (RMSE = 0.49) or WCC (RMSE = 0.49) model during the senescence period. The result justifies our assertion

Uranium mobility across annual growth rings in three deciduous tree species.

Science.gov (United States)

McHugh, Kelly C; Widom, Elisabeth; Spitz, Henry B; Wiles, Gregory C; Glover, Sam E

2018-02-01

Black walnut (Juglans nigra), slippery elm (Ulmus rubra), and white ash (Fraxinus americana) trees were evaluated as potential archives of past uranium (U) contamination. Like other metals, U mobility in annual growth rings of trees is dependent on the tree species. Uranium concentrations and isotopic compositions (masses 234, 235, 236, and 238) were analyzed by thermal ionization mass spectrometry to test the efficacy of using tree rings to retroactively monitor U pollution from the FFMPC, a U purification facility operating from 1951 to 1989. This study found non-natural U (depleted U and detectable 236 U) in growth rings of all three tree species that pre-dated the start of operations at FFMPC and compositional trends that did not correspond with known contamination events. Therefore, the annual growth rings of these tree species cannot be used to reliably monitor the chronology of U contamination. Copyright © 2017 Elsevier Ltd. All rights reserved.

The natural abundance of 15N in litter and soil profiles under six temperate tree species: N cycling depends on tree species traits and site fertility

DEFF Research Database (Denmark)

Callesen, Ingeborg; Nilsson, Lars Ola; Schmidt, Inger Kappel

2013-01-01

We investigated the influence of tree species on the natural 15N abundance in forest stands under elevated ambient N deposition.We analysed δ15N in litter, the forest floor and three mineral soil horizons along with ecosystem N status variables at six sites planted three decades ago with five Eur...... to nitrate leaching or other N transformation processes....... species leached more nitrate.The δ15N pattern reflected tree species related traits affecting the N cycling as well as site fertility and former land use, and possibly differences in N leaching. The tree species δ15N patterns reflected fractionation caused by uptake of N through mycorrhiza rather than due...

Object-based methods for individual tree identification and tree species classification from high-spatial resolution imagery

Science.gov (United States)

Wang, Le

2003-10-01

Modern forest management poses an increasing need for detailed knowledge of forest information at different spatial scales. At the forest level, the information for tree species assemblage is desired whereas at or below the stand level, individual tree related information is preferred. Remote Sensing provides an effective tool to extract the above information at multiple spatial scales in the continuous time domain. To date, the increasing volume and readily availability of high-spatial-resolution data have lead to a much wider application of remotely sensed products. Nevertheless, to make effective use of the improving spatial resolution, conventional pixel-based classification methods are far from satisfactory. Correspondingly, developing object-based methods becomes a central challenge for researchers in the field of Remote Sensing. This thesis focuses on the development of methods for accurate individual tree identification and tree species classification. We develop a method in which individual tree crown boundaries and treetop locations are derived under a unified framework. We apply a two-stage approach with edge detection followed by marker-controlled watershed segmentation. Treetops are modeled from radiometry and geometry aspects. Specifically, treetops are assumed to be represented by local radiation maxima and to be located near the center of the tree-crown. As a result, a marker image was created from the derived treetop to guide a watershed segmentation to further differentiate overlapping trees and to produce a segmented image comprised of individual tree crowns. The image segmentation method developed achieves a promising result for a 256 x 256 CASI image. Then further effort is made to extend our methods to the multiscales which are constructed from a wavelet decomposition. A scale consistency and geometric consistency are designed to examine the gradients along the scale-space for the purpose of separating true crown boundary from unwanted

Mapping forest tree species over large areas with partially cloudy Landsat imagery

Science.gov (United States)

Turlej, K.; Radeloff, V.

2017-12-01

Forests provide numerous services to natural systems and humankind, but which services forest provide depends greatly on their tree species composition. That makes it important to track not only changes in forest extent, something that remote sensing excels in, but also to map tree species. The main goal of our work was to map tree species with Landsat imagery, and to identify how to maximize mapping accuracy by including partially cloudy imagery. Our study area covered one Landsat footprint (26/28) in Northern Wisconsin, USA, with temperate and boreal forests. We selected this area because it contains numerous tree species and variable forest composition providing an ideal study area to test the limits of Landsat data. We quantified how species-level classification accuracy was affected by a) the number of acquisitions, b) the seasonal distribution of observations, and c) the amount of cloud contamination. We classified a single year stack of Landsat-7, and -8 images data with a decision tree algorithm to generate a map of dominant tree species at the pixel- and stand-level. We obtained three important results. First, we achieved producer's accuracies in the range 70-80% and user's accuracies in range 80-90% for the most abundant tree species in our study area. Second, classification accuracy improved with more acquisitions, when observations were available from all seasons, and is the best when images with up to 40% cloud cover are included. Finally, classifications for pure stands were 10 to 30 percentage points better than those for mixed stands. We conclude that including partially cloudy Landsat imagery allows to map forest tree species with accuracies that were previously only possible for rare years with many cloud-free observations. Our approach thus provides important information for both forest management and science.

Thematic and spatial resolutions affect model-based predictions of tree species distribution.

Science.gov (United States)

Liang, Yu; He, Hong S; Fraser, Jacob S; Wu, ZhiWei

2013-01-01

Subjective decisions of thematic and spatial resolutions in characterizing environmental heterogeneity may affect the characterizations of spatial pattern and the simulation of occurrence and rate of ecological processes, and in turn, model-based tree species distribution. Thus, this study quantified the importance of thematic and spatial resolutions, and their interaction in predictions of tree species distribution (quantified by species abundance). We investigated how model-predicted species abundances changed and whether tree species with different ecological traits (e.g., seed dispersal distance, competitive capacity) had different responses to varying thematic and spatial resolutions. We used the LANDIS forest landscape model to predict tree species distribution at the landscape scale and designed a series of scenarios with different thematic (different numbers of land types) and spatial resolutions combinations, and then statistically examined the differences of species abundance among these scenarios. Results showed that both thematic and spatial resolutions affected model-based predictions of species distribution, but thematic resolution had a greater effect. Species ecological traits affected the predictions. For species with moderate dispersal distance and relatively abundant seed sources, predicted abundance increased as thematic resolution increased. However, for species with long seeding distance or high shade tolerance, thematic resolution had an inverse effect on predicted abundance. When seed sources and dispersal distance were not limiting, the predicted species abundance increased with spatial resolution and vice versa. Results from this study may provide insights into the choice of thematic and spatial resolutions for model-based predictions of tree species distribution.

Hydraulic Function in Australian Tree Species during Drought-Induced Mortality

Science.gov (United States)

Tissue, D.; Maier, C.; Creek, D.; Choat, B.

2016-12-01

Drought induced tree mortality and decline are key issues facing forest ecology and management. Here, we primarily investigated the hydraulic limitations underpinning drought-induced mortality in three Australian tree species. Using field-based large rainout shelters, three angiosperm species (Casuarina cunninghamiana, Eucalyptus sideroxylon, Eucalyptus tereticornis) were subjected to two successive drought and recovery cycles, prior to a subsequent long and extreme drought to mortality; total duration of experiment was 2.5 years. Leaf gas exchange, leaf and stem hydraulics, and carbon reserves were monitored during the experiment. Trees died as a result of failure in the hydraulic transport system, primarily related to water stress induced embolism. Stomatal closure occurred prior to the induction of significant embolism in the stem xylem of all species. Nonetheless, trees suffered a rapid decline in xylem water potential and increase in embolism during the severe drought treatment. Trees died at water potentials causing greater than 90% loss of hydraulic conductivity in the stem, providing support for the theory that lethal water potential is correlated with complete loss of hydraulic function in the stem xylem of angiosperms.

Lidar-based individual tree species classification using convolutional neural network

Science.gov (United States)

Mizoguchi, Tomohiro; Ishii, Akira; Nakamura, Hiroyuki; Inoue, Tsuyoshi; Takamatsu, Hisashi

2017-06-01

Terrestrial lidar is commonly used for detailed documentation in the field of forest inventory investigation. Recent improvements of point cloud processing techniques enabled efficient and precise computation of an individual tree shape parameters, such as breast-height diameter, height, and volume. However, tree species are manually specified by skilled workers to date. Previous works for automatic tree species classification mainly focused on aerial or satellite images, and few works have been reported for classification techniques using ground-based sensor data. Several candidate sensors can be considered for classification, such as RGB or multi/hyper spectral cameras. Above all candidates, we use terrestrial lidar because it can obtain high resolution point cloud in the dark forest. We selected bark texture for the classification criteria, since they clearly represent unique characteristics of each tree and do not change their appearance under seasonable variation and aged deterioration. In this paper, we propose a new method for automatic individual tree species classification based on terrestrial lidar using Convolutional Neural Network (CNN). The key component is the creation step of a depth image which well describe the characteristics of each species from a point cloud. We focus on Japanese cedar and cypress which cover the large part of domestic forest. Our experimental results demonstrate the effectiveness of our proposed method.

Effects of habitat and landscape characteristics on medium and large mammal species richness and composition in northern Uruguay

Directory of Open Access Journals (Sweden)

María José Andrade-Núñez

2010-01-01

Full Text Available The increasing world population and demand for food and other products has accelerated the conversion of natural habitats into agricultural lands, plantations and urban areas. Changes in habitat and landscape characteristics due to land-use change can have a significant effect on species presence, abundance, and distribution. Multi-scale approaches have been used to determine the proper spatial scales at which species and communities are responding to habitat transformation. In this context, we evaluated medium and large mammal species richness and composition in gallery forest (n = 10, grassland (n = 10, and exotic tree plantation (n = 10 in a region where grasslands have been converted into exotic tree plantations. We quantified mammal species richness and composition with camera traps and track surveys. The composition of the mammal community was related with local habitat variables, and landscape variables measured at seven spatial scales. We found 14 mammal species in forest, 11 species in plantation, and 7 mammal species in grassland. Two species are exotics, the wild boar Sus scrofa Linnaeus, 1758 and the European hare Lepus europaeus Pallas, 1778. The most common species are the crab-eating fox Cerdocyon thous Linnaeus, 1766, the nine-banded armadillo Dasypus novemcinctus Linnaeus, 1758 and the gray brocket deer Mazama gouazoubira G. Fischer, 1814 which are generalist species. Our results showed significant differences in mammal species richness and composition among the three habitat types. Plantations can have positive and negative effects on the presence of species restricted to grasslands. Positive effects are reflected in a wider local distribution of some forest species that rarely use grassland. The most important habitat and landscape variables that influenced mammal species richness and composition were vertical structure index, canopy cover, tree species diversity, percentage of grass, and the percentage of forest and grassland

Using a botanical garden to assess factors influencing the colonization of exotic woody plants by phyllophagous insects.

Science.gov (United States)

Kirichenko, Natalia; Kenis, M

2016-09-01

The adoption of exotic plants by indigenous herbivores in the region of introduction can be influenced by numerous factors. A botanical garden in Western Siberia was used to test various hypotheses on the adaptation of indigenous phyllophagous insects to exotic plants invasions, focusing on two feeding guilds, external leaf chewers and leaf miners. A total of 150 indigenous and exotic woody plant species were surveyed for insect damage, abundance and species richness. First, exotic woody plants were much less damaged by chewers and leaf miners than native plants, and the leaf miners' species richness was much lower on exotic than native plants. Second, exotic woody plants having a congeneric species in the region of introduction were more damaged by chewers and hosted a more abundant and species-rich community of leaf miners than plants without native congeneric species. Third, damage by chewers significantly increased with the frequency of planting of exotic host plants outside the botanical garden, and leaf miners' abundance and species richness significantly increased with residence time in the garden. Finally, no significant relationship was found between insect damage or abundance and the origin of the exotic plants. Besides the ecological implications of the results, this study also illustrates the potential of botanical gardens to test ecological hypotheses on biological invasions and insect-plant interactions on a large set of plant species.

Exotic invasive plants

Science.gov (United States)

Carolyn Hull Sieg; Barbara G. Phillips; Laura P. Moser

2003-01-01

Ecosystems worldwide are threatened by nonnative plant invasions that can cause undesirable, irreversible changes. They can displace native plants and animals, out-cross with native flora, alter nutrient cycling and other ecosystem functions, and even change an ecosystem's flammability (Walker and Smith 1997). After habitat loss, the spread of exotic species is...

Trade-off between early emergence and herbivore susceptibility mediates exotic success in an experimental California plant community.

Science.gov (United States)

Waterton, Joseph; Cleland, Elsa E

2016-12-01

Ecological trade-offs are fundamental to theory in community ecology; critical for understanding species coexistence in diverse plant communities, as well as the evolution of diverse life-history strategies. Invasions by exotic species can provide insights into the importance of trade-offs in community assembly, because the ecological strategies of invading species often differ from those present in the native species pool. Exotic annual species have invaded many Mediterranean-climate areas around the globe, and often germinate and emerge earlier in the growing season than native species. Early-season growth can enable exotic annual species to preempt space and resources, competitively suppressing later-emerging native species; however, early-emerging individuals may also be more apparent to herbivores. This suggests a potential trade-off between seasonal phenology and susceptibility to herbivory. To evaluate this hypothesis, we monitored the emergence and growth of 12 focal species (six each native and exotic) in monoculture and polyculture, while experimentally excluding generalist herbivores both early and later in the growing season. Consistent with past studies, the exotic species emerged earlier than native species. Regardless of species origin, earlier-emerging species achieved greater biomass by the end of the experiment, but were more negatively impacted by herbivory, particularly in the early part of the growing season. This greater impact of early-season herbivory on early-active species led to a reduction in the competitive advantage of exotic species growing in polyculture, and improved the performance of later-emerging natives. Such a trade-off between early growth and susceptibility to herbivores could be an important force in community assembly in seasonal herbaceous-dominated ecosystems. These results also show how herbivore exclusion favors early-active exotic species in this system, with important implications for management in many areas invaded

Anchoring quartet-based phylogenetic distances and applications to species tree reconstruction.

Science.gov (United States)

Sayyari, Erfan; Mirarab, Siavash

2016-11-11

Inferring species trees from gene trees using the coalescent-based summary methods has been the subject of much attention, yet new scalable and accurate methods are needed. We introduce DISTIQUE, a new statistically consistent summary method for inferring species trees from gene trees under the coalescent model. We generalize our results to arbitrary phylogenetic inference problems; we show that two arbitrarily chosen leaves, called anchors, can be used to estimate relative distances between all other pairs of leaves by inferring relevant quartet trees. This results in a family of distance-based tree inference methods, with running times ranging between quadratic to quartic in the number of leaves. We show in simulated studies that DISTIQUE has comparable accuracy to leading coalescent-based summary methods and reduced running times.

Tree species diversity in the Eastern Ghats of northern Andhra Pradesh, India

Directory of Open Access Journals (Sweden)

M. Tarakeswara Naidu

2015-06-01

Full Text Available The present study was conducted to analyze tree species diversity in the tropical forests of the Eastern Ghats of northern Andhra Pradesh, India.  A total of 270 species of trees (≥15cm girth at breast height pertaining to 177 genera belonging to 55 families were recorded.  Among the 270 species, 141 species were observed to be common, 78 were occasional and 51 species were rare in the study area.  Fabaceae was the dominant family with 33 species followed by Rubiaceae with 15 species and Malvaceae, Moraceae and Phyllanthaceae with 13 species each.  The genera with the highest number of species include Ficus (12 species, Diospyros (8 species, Albizia and Grewia (6 species each, Acacia and Bauhinia (5 species each.  Forty-five percent of the species were indigenous. This illustrates the diversity of the tree species in the studied area of the Eastern Ghats and also emphasizes the need for their conservation. 

STANDING HERBAGE BIOMASS UNDER DIFFERENT TREE SPECIES DISPERSED IN PASTURES OF CATTLE FARMS

Directory of Open Access Journals (Sweden)

Humberto Esquivel-Mimenza

2013-08-01

Full Text Available The study conducted in a tropical dry ecosystem at Cañas, Guanacaste, Costa Rica (10o 11´ N and 84o15´W measure the standing herbage biomass (SHB availability and quality under six isolated tree species of different canopy architecture dispersed in active Brachiaria brizantha pastures and compare it to that growing at full sun light. Standing herbage biomass (HB harvesting and Photosynthetic active radiation (PAR readings were taken at three different periods in a paired sample scheme. Of the six tree species studied, Enterolobium cyclocarpum had the largest mean crown cover while Acrocomia aculeata had the smallest. Significant differences were observed between species (P = 0.0002 and seasons (P<0.008 for the percentage of PAR transmitted under the canopy but PAR levels obtained under all species were consistent throughout seasons since the interaction between species and season was not significantly different (P=0.98. Lower PAR readings (<50% were taken under the canopies E. cyclocarpum and Guazuma ulmifolia (21.7 and 33.7 % respectively. Standing herbage biomass (SHB harvested under the crown of isolated mature individual tree species was significantly lower (P<0.001 than in open pasture areas for all tree species except that of A. aculeate but SHB crude protein content, was higher underneath all tree canopies. It can conclude that light reduction caused by tree canopies reduces SHB availability and increases the quality underneath tree canopies compared to areas of full sun but these varies accordingly to tree species and seasons.

Phylogenetic Structure of Tree Species across Different Life Stages from Seedlings to Canopy Trees in a Subtropical Evergreen Broad-Leaved Forest.

Science.gov (United States)

Jin, Yi; Qian, Hong; Yu, Mingjian

2015-01-01

Investigating patterns of phylogenetic structure across different life stages of tree species in forests is crucial to understanding forest community assembly, and investigating forest gap influence on the phylogenetic structure of forest regeneration is necessary for understanding forest community assembly. Here, we examine the phylogenetic structure of tree species across life stages from seedlings to canopy trees, as well as forest gap influence on the phylogenetic structure of forest regeneration in a forest of the subtropical region in China. We investigate changes in phylogenetic relatedness (measured as NRI) of tree species from seedlings, saplings, treelets to canopy trees; we compare the phylogenetic turnover (measured as βNRI) between canopy trees and seedlings in forest understory with that between canopy trees and seedlings in forest gaps. We found that phylogenetic relatedness generally increases from seedlings through saplings and treelets up to canopy trees, and that phylogenetic relatedness does not differ between seedlings in forest understory and those in forest gaps, but phylogenetic turnover between canopy trees and seedlings in forest understory is lower than that between canopy trees and seedlings in forest gaps. We conclude that tree species tend to be more closely related from seedling to canopy layers, and that forest gaps alter the seedling phylogenetic turnover of the studied forest. It is likely that the increasing trend of phylogenetic clustering as tree stem size increases observed in this subtropical forest is primarily driven by abiotic filtering processes, which select a set of closely related evergreen broad-leaved tree species whose regeneration has adapted to the closed canopy environments of the subtropical forest developed under the regional monsoon climate.

Capturing characteristics of beryllium-7 in selected tree species

International Nuclear Information System (INIS)

Narazaki, Yukinori; Karube, Yoshiharu.

1997-01-01

With regard to 7 Be, a natural radioactive nuclide, the botanical capturing characteristics were compared between eight species of those trees which grow in a local district. The mechanism of such botanical capture by their leaves was discussed. The amounts of captured 7 Be were different by tree species. Higher radioactivities were found in the coniferous trees than in the broadleaf trees. The seasonal change of 7 Be radioactivity in leaves was significantly higher in winter and spring and lower in summer. Since airborne or fallout 7 Be particles stay on the upper face of leaves, the deposited amount depended on the surface area per weight of leaves particularly for evergreen trees. Because the 7 Be amount in leaves depended on the fallout capturing ability of leafs superficial skin as well as the cleaning effect of rain and the like, the radioactivity on the surface can change depending on the surface condition of leaves even in the case the levels of 7 Be fallout stayed the same. (author)

Local extinction and colonisation in native and exotic fish in relation to changes in land use

OpenAIRE

Kopp , Dorothée; Figuerola , Jordi; Compin , Arthur; Santoul , Frédéric; Céréghino , Régis

2011-01-01

International audience; Distribution patterns of many native and exotic fish species are well documented, yet little is known about the temporal dynamics of native and exotic diversity in relation to changes in land use. We hypothesised that colonisation rates would be higher for exotic fish species and that extinction rates would be higher for native species in large stream systems. We also predicted that cold-water species would be more impacted than thermally tolerant species. To test thes...

[Effects of sampling plot number on tree species distribution prediction under climate change].

Science.gov (United States)

Liang, Yu; He, Hong-Shi; Wu, Zhi-Wei; Li, Xiao-Na; Luo, Xu

2013-05-01

Based on the neutral landscapes under different degrees of landscape fragmentation, this paper studied the effects of sampling plot number on the prediction of tree species distribution at landscape scale under climate change. The tree species distribution was predicted by the coupled modeling approach which linked an ecosystem process model with a forest landscape model, and three contingent scenarios and one reference scenario of sampling plot numbers were assumed. The differences between the three scenarios and the reference scenario under different degrees of landscape fragmentation were tested. The results indicated that the effects of sampling plot number on the prediction of tree species distribution depended on the tree species life history attributes. For the generalist species, the prediction of their distribution at landscape scale needed more plots. Except for the extreme specialist, landscape fragmentation degree also affected the effects of sampling plot number on the prediction. With the increase of simulation period, the effects of sampling plot number on the prediction of tree species distribution at landscape scale could be changed. For generalist species, more plots are needed for the long-term simulation.

Diagnostics of Tree Diseases Caused by Phytophthora austrocedri Species.

Science.gov (United States)

Mulholland, Vincent; Elliot, Matthew; Green, Sarah

2015-01-01

We present methods for the detection and quantification of four Phytophthora species which are pathogenic on trees; Phytophthora ramorum, Phytophthora kernoviae, Phytophthora lateralis, and Phytophthora austrocedri. Nucleic acid extraction methods are presented for phloem tissue from trees, soil, and pure cultures on agar plates. Real-time PCR methods are presented and include primer and probe sets for each species, general advice on real-time PCR setup and data analysis. A method for sequence-based identification, useful for pure cultures, is also included.

Determination of incoming solar radiation in major tree species in Turkey.

Science.gov (United States)

Yilmaz, Osman Yalcin; Sevgi, Orhan; Koc, Ayhan

2012-07-01

Light requirements and spatial distribution of major forest tree species in Turkey hasn't been analyzed yet. Continuous surface solar radiation data, especially at mountainous-forested areas, are needed to put forward this relationship between forest tree species and solar radiation. To achieve this, GIS-based modeling of solar radiation is one of the methods used in rangelands to estimate continuous surface solar radiation. Therefore, mean monthly and annual total global solar radiation maps of whole Turkey were computed spatially using GRASS GIS software "r.sun" model under clear-sky (cloudless) conditions. 147498 pure forest stand point-based data were used in the study for calculating mean global solar radiation values of all the major forest tree species of Turkey. Beech had the lowest annual mean total global solar radiation value of 1654.87 kWh m(-2), whereas juniper had the highest value of 1928.89 kWh m(-2). The rank order of tree species according to the mean monthly and annual total global solar radiation values, using a confidence level of p solar radiation values of sites and light requirements of forest trees ranked similarly.

Non-Native Ambrosia Beetles as Opportunistic Exploiters of Living but Weakened Trees.

Science.gov (United States)

Ranger, Christopher M; Schultz, Peter B; Frank, Steven D; Chong, Juang H; Reding, Michael E

2015-01-01

Exotic Xylosandrus spp. ambrosia beetles established in non-native habitats have been associated with sudden and extensive attacks on a diverse range of living trees, but factors driving their shift from dying/dead hosts to living and healthy ones are not well understood. We sought to characterize the role of host physiological condition on preference and colonization by two invaders, Xylosandrus germanus and Xylosandrus crassiusculus. When given free-choice under field conditions among flooded and non-flooded deciduous tree species of varying intolerance to flooding, beetles attacked flood-intolerant tree species over more tolerant species within 3 days of initiating flood stress. In particular, flood-intolerant flowering dogwood (Cornus florida) sustained more attacks than flood-tolerant species, including silver maple (Acer saccharinum) and swamp white oak (Quercus bicolor). Ethanol, a key host-derived attractant, was detected at higher concentrations 3 days after initiating flooding within stems of flood intolerant species compared to tolerant and non-flooded species. A positive correlation was also detected between ethanol concentrations in stem tissue and cumulative ambrosia beetle attacks. When adult X. germanus and X. crassiusculus were confined with no-choice to stems of flood-stressed and non-flooded C. florida, more ejected sawdust resulting from tunneling activity was associated with the flood-stressed trees. Furthermore, living foundresses, eggs, larvae, and pupae were only detected within galleries created in stems of flood-stressed trees. Despite a capability to attack diverse tree genera, X. germanus and X. crassiusculus efficiently distinguished among varying host qualities and preferentially targeted trees based on their intolerance of flood stress. Non-flooded trees were not preferred or successfully colonized. This study demonstrates the host-selection strategy exhibited by X. germanus and X. crassiusculus in non-native habitats involves

Non-Native Ambrosia Beetles as Opportunistic Exploiters of Living but Weakened Trees.

Directory of Open Access Journals (Sweden)

Christopher M Ranger

Full Text Available Exotic Xylosandrus spp. ambrosia beetles established in non-native habitats have been associated with sudden and extensive attacks on a diverse range of living trees, but factors driving their shift from dying/dead hosts to living and healthy ones are not well understood. We sought to characterize the role of host physiological condition on preference and colonization by two invaders, Xylosandrus germanus and Xylosandrus crassiusculus. When given free-choice under field conditions among flooded and non-flooded deciduous tree species of varying intolerance to flooding, beetles attacked flood-intolerant tree species over more tolerant species within 3 days of initiating flood stress. In particular, flood-intolerant flowering dogwood (Cornus florida sustained more attacks than flood-tolerant species, including silver maple (Acer saccharinum and swamp white oak (Quercus bicolor. Ethanol, a key host-derived attractant, was detected at higher concentrations 3 days after initiating flooding within stems of flood intolerant species compared to tolerant and non-flooded species. A positive correlation was also detected between ethanol concentrations in stem tissue and cumulative ambrosia beetle attacks. When adult X. germanus and X. crassiusculus were confined with no-choice to stems of flood-stressed and non-flooded C. florida, more ejected sawdust resulting from tunneling activity was associated with the flood-stressed trees. Furthermore, living foundresses, eggs, larvae, and pupae were only detected within galleries created in stems of flood-stressed trees. Despite a capability to attack diverse tree genera, X. germanus and X. crassiusculus efficiently distinguished among varying host qualities and preferentially targeted trees based on their intolerance of flood stress. Non-flooded trees were not preferred or successfully colonized. This study demonstrates the host-selection strategy exhibited by X. germanus and X. crassiusculus in non-native habitats

Above- and belowground responses to tree thinning depend on the treatment of tree debris

Science.gov (United States)

Suzanne M. Owen; Carolyn Hull Sieg; Catherine A. Gehring; Matthew A. Bowker

2009-01-01

Mechanical mastication is increasingly prescribed for wildfire mitigation, yet little is known about the ecological impacts of this fuels treatment. Mastication shreds trees into woodchips as an alternative to tree thinning and burning the resulting slash, which can create soil disturbances that favor exotic plants. Previous research on mastication has not...

Rhizosphere soil microbial index of tree species in a coal mining ecosystem

Energy Technology Data Exchange (ETDEWEB)

Sinha, S.; Masto, R.E.; Ram, L.C.; Selvi, V.A.; Srivastava, N.K.; Tripathi, R.C.; George, J. [Central Institute of Mining & Fuel Research, Dhanbad (India)

2009-09-15

Microbial characterization of the tree rhizosphere provides important information relating to the screening of tree species for re-vegetation of degraded land. Rhizosphere soil samples collected from a few predominant tree species growing in the coal mining ecosystem of Dhanbad, India, were analyzed for soil organic carbon (SOC), mineralizable N, microbial biomass carbon (MBC), active microbial biomass carbon (AMBC), basal soil respiration (BSR), and soil enzyme activities (dehydrogenase, urease, catalase, phenol oxidase, and peroxidase). Principal component analysis was employed to derive a rhizosphere soil microbial index (RSMI) and accordingly, dehydrogenase, BSR/MBC, MBC/SOC, EC, phenol oxidase and AMBC were found to be the most critical properties. The observed values for the above properties were converted into a unitless score (0-1.00) and the scores were integrated into RSMI. The tree species could be arranged in decreasing order of the RSMI as: A. marmelos (0.718), A. indica (0.715), Bauhinia bauhinia (0.693), B. monosperma (0.611), E. jambolana (0.601), Moringa oleifera (0.565), Dalbergia sissoo (0.498), T indica (0.488), Morus alba (0.415), F religiosa (0.291), Eucalyptus sp. (0.232) and T grandis (0.181). It was concluded that tree species in coal mining areas had diverse effects on their respective rhizosphere microbial processes, which could directly or indirectly determine the survival and performance of the planted tree species in degraded coal mining areas. Tree species with higher RSMI values could be recommended for re-vegetation of degraded coal mining area.

Complementary models of tree species-soil relationships in old-growth temperate forests

Science.gov (United States)

Cross, Alison; Perakis, Steven S.

2011-01-01

Ecosystem level studies identify plant soil feed backs as important controls on soil nutrient availability,particularly for nitrogen and phosphorus. Although site and species specific studies of tree species soil relationships are relatively common,comparatively fewer studies consider multiple coexisting speciesin old-growth forests across a range of sites that vary underlying soil fertility. We characterized patterns in forest floor and mineral soil nutrients associated with four common tree species across eight undisturbed old-growth forests in Oregon, USA, and used two complementary conceptual models to assess tree species soil relationships. Plant soil feedbacks that could reinforce sitelevel differences in nutrient availability were assessed using the context dependent relationships model, where by relative species based differences in each soil nutrient divergedorconvergedas nutrient status changed across sites. Tree species soil relationships that did not reflect strong feedbacks were evaluated using a site independent relationships model, where by forest floor and surface mineral soil nutrient tools differed consistently by tree species across sites,without variation in deeper mineral soils. We found that theorganically cycled elements carbon, nitrogen, and phosphorus exhibited context-dependent differences among species in both forest floor and mineral soil, and most of ten followed adivergence model,where by species differences were greatest at high-nutrient sites. These patterns are consistent with the oryemphasizing biotic control of these elements through plant soil feedback mechanisms. Site independent species differences were strongest for pool so if the weather able cations calcium, magnesium, potassium,as well as phosphorus, in mineral soils. Site independent species differences in forest floor nutrients we reattributable too nespecies that displayed significant greater forest floor mass accumulation. Our finding confirmed that site-independent and

Presence of exotic birds in San Luis Potosi city, Mexican Plateau

Directory of Open Access Journals (Sweden)

Ramírez-Albores, J.E.

2015-01-01

Full Text Available We recorded 12 exotic bird species in San Luis Potosi, Mexico and adjacent areas. Obtained data were collected during the period August 2012 to August 2013. From the total of recorded species, eight are confirmations (Anas platyrhynchos domesticus, Cairina moschata, Bubulcus ibis, Columba livia, Sturnus vulgaris, Turdus rufopalliatus, Quiscalus mexicanus and Passer domesticus and four are new records (Aratinga canicularis, Amazona oratrix, A. autumnalis and Cyanocorax yncas. Although not all exotic species represent a risk because of the lack of the necessary resources for the establishment of abundant viable populations, it is important to publicize their status in the region. Therefore, knowing the presence of exotic species in a new distribution area is important for monitoring its establishment and colonization, and defining management, control and eradication programs of these species, along with environmental education programs that would lead to a better understanding of impacts that these species can cause.

The United States Experience with the Exotic Cerambycid Anoplophora glabripennis: Detection, Quarantine, and Control

Science.gov (United States)

Robert A. Haack; Therese M. Poland; Rui-Tong Gao

2000-01-01

It is estimated that there are at least 4500 exotic (non-indigenous) organisms currently established in the United States(US) (US Congress 1993) and possibly as many as 50,000 (Pimentel et al. 2000). Of the many exotic organisms now in the US, more than 400 are insects that feed on trees and shrubs.(Haack and Byler 1993, Mattson et al. 1994, Niemela and Mattson 1996)....

Widespread Discordance of Gene Trees with Species Tree inDrosophila: Evidence for Incomplete Lineage Sorting

Energy Technology Data Exchange (ETDEWEB)

Pollard, Daniel A.; Iyer, Venky N.; Moses, Alan M.; Eisen,Michael B.

2006-08-28

The phylogenetic relationship of the now fully sequencedspecies Drosophila erecta and D. yakuba with respect to the D.melanogaster species complex has been a subject of controversy. All threepossible groupings of the species have been reported in the past, thoughrecent multi-gene studies suggest that D. erecta and D. yakuba are sisterspecies. Using the whole genomes of each of these species as well as thefour other fully sequenced species in the subgenus Sophophora, we set outto investigate the placement of D. erecta and D. yakuba in the D.melanogaster species group and to understand the cause of the pastincongruence. Though we find that the phylogeny grouping D. erecta and D.yakuba together is the best supported, we also find widespreadincongruence in nucleotide and amino acid substitutions, insertions anddeletions, and gene trees. The time inferred to span the two keyspeciation events is short enough that under the coalescent model, theincongruence could be the result of incomplete lineage sorting.Consistent with the lineage-sorting hypothesis, substitutions supportingthe same tree were spatially clustered. Support for the different treeswas found to be linked to recombination such that adjacent genes supportthe same tree most often in regions of low recombination andsubstitutions supporting the same tree are most enriched roughly on thesame scale as linkage disequilibrium, also consistent with lineagesorting. The incongruence was found to be statistically significant androbust to model and species choice. No systematic biases were found. Weconclude that phylogenetic incongruence in the D. melanogaster speciescomplex is the result, at least in part, of incomplete lineage sorting.Incomplete lineage sorting will likely cause phylogenetic incongruence inmany comparative genomics datasets. Methods to infer the correct speciestree, the history of every base in the genome, and comparative methodsthat control for and/or utilize this information will be

Effect of liquid nitrogen storage on seed germination of 51 tree species

Science.gov (United States)

Jill R. Barbour; Bernard R. Parresol

2003-01-01

Two liquid nitrogen storage experiments were performed on 51 tree species. In experiment 1, seeds of 9western tree species were placed in a liquid nitrogen tank for 3 time periods: 24 hours, 4 weeks, and 222 days. A corresponding control sample accompanied each treatment. For three species,Calocedrus decurrens, Pinus jefferyi, and ...

Changes to southern Appalachian water yield and stormflow after loss of a foundation species

Science.gov (United States)

Steven T. Brantley; Chelcy Ford Miniat; Katherine J. Elliott; Stephanie H. Laseter; James M. Vose

2014-01-01

Few studies have examined how insect outbreaks affect landscape-level hydrologic processes. We report the hydrologic effects of the invasive, exotic hemlock woolly adelgid (HWA) in a headwater catchment in the southern Appalachian Mountains. The study watershed experienced complete mortality of an evergreen tree species, Tsuga canadensis (L.) Carr. (...

Nitrogen fixation in four dryland tree species in central Chile

International Nuclear Information System (INIS)

Ovalle, C.; Arredondo, S.; Aronson, J.; Longeri, L.; Avendano, J.

1998-01-01

Results are presented from a 5-year experiment using 15 N-enriched fertilizer to determine N 2 fixation in four tree species on degraded soils in a Mediterranean-climate region of central Chile in which there are 5 months of drought. Species tested included three slow-growing but long-lived savannah trees native to southers South America, (acacia caven, Prosopic alba and P. chilensis; Mimosoideae), and Tagasaste (Chamaecytisus proliferus ssp. palmensis; Papilonoideae), a fast-growing but medium-lived tree from the Canary Islands. Tagasaste produced four- to twenty-fold more biomass than the other species, but showed declining N 2 fixation and biomass accumulation during the 5th year, corresponding to the juvenile-to-adult developmental transition. Nitrogen content was significantly higher in Tagasaste and Acacia caven than in the other species. The data revealed inter-specific differences in resource allocation and phenology of N 2 fixation rarely detailed for woody plants in dryland regions. (author)

Tree species distribution in temperate forests is more influenced by soil than by climate.

Science.gov (United States)

Walthert, Lorenz; Meier, Eliane Seraina

2017-11-01

Knowledge of the ecological requirements determining tree species distributions is a precondition for sustainable forest management. At present, the abiotic requirements and the relative importance of the different abiotic factors are still unclear for many temperate tree species. We therefore investigated the relative importance of climatic and edaphic factors for the abundance of 12 temperate tree species along environmental gradients. Our investigations are based on data from 1,075 forest stands across Switzerland including the cold-induced tree line of all studied species and the drought-induced range boundaries of several species. Four climatic and four edaphic predictors represented the important growth factors temperature, water supply, nutrient availability, and soil aeration. The climatic predictors were derived from the meteorological network of MeteoSwiss, and the edaphic predictors were available from soil profiles. Species cover abundances were recorded in field surveys. The explanatory power of the predictors was assessed by variation partitioning analyses with generalized linear models. For six of the 12 species, edaphic predictors were more important than climatic predictors in shaping species distribution. Over all species, abundances depended mainly on nutrient availability, followed by temperature, water supply, and soil aeration. The often co-occurring species responded similar to these growth factors. Drought turned out to be a determinant of the lower range boundary for some species. We conclude that over all 12 studied tree species, soil properties were more important than climate variables in shaping tree species distribution. The inclusion of appropriate soil variables in species distribution models allowed to better explain species' ecological niches. Moreover, our study revealed that the ecological requirements of tree species assessed in local field studies and in experiments are valid at larger scales across Switzerland.

CosmoBon, tree research team, for studying utilization of woody plant in space environment

Science.gov (United States)

Tomita-Yokotani, Kaori; Yamashita, Masamichi; Hashimoto, Hirofumi; Sato, Seigo; Baba, Keiichi; Chida, Yukari

2012-07-01

We are proposing to raise woody plants in space for several applications and plant science, as Tree research team, TRT. Trees produce excess oxygen, wooden materials for living cabin, and provide biomass for cultivating mushroom and insect as for the space agriculture. Excellent tree shapes which would be deeply related to wood formation improve quality of life under stressful environment in outer space. We have the serious problem about their size. Bonsai is one of the Japanese traditional arts. We have been investigating the tension wood formation under exotic gravitational environment using Bonsai. CosmoBon is the small tree Bonsai for our space experiment. The tension wood formation in CosmoBon was confirmed as the same as that in the natural trees. Our goal is to examine feasibility to grow various species of trees in space as bioresource for space agriculture.

Inferring duplications, losses, transfers and incomplete lineage sorting with nonbinary species trees.

Science.gov (United States)

Stolzer, Maureen; Lai, Han; Xu, Minli; Sathaye, Deepa; Vernot, Benjamin; Durand, Dannie

2012-09-15

Gene duplication (D), transfer (T), loss (L) and incomplete lineage sorting (I) are crucial to the evolution of gene families and the emergence of novel functions. The history of these events can be inferred via comparison of gene and species trees, a process called reconciliation, yet current reconciliation algorithms model only a subset of these evolutionary processes. We present an algorithm to reconcile a binary gene tree with a nonbinary species tree under a DTLI parsimony criterion. This is the first reconciliation algorithm to capture all four evolutionary processes driving tree incongruence and the first to reconcile non-binary species trees with a transfer model. Our algorithm infers all optimal solutions and reports complete, temporally feasible event histories, giving the gene and species lineages in which each event occurred. It is fixed-parameter tractable, with polytime complexity when the maximum species outdegree is fixed. Application of our algorithms to prokaryotic and eukaryotic data show that use of an incomplete event model has substantial impact on the events inferred and resulting biological conclusions. Our algorithms have been implemented in Notung, a freely available phylogenetic reconciliation software package, available at http://www.cs.cmu.edu/~durand/Notung. mstolzer@andrew.cmu.edu.

Predicting abundance of 80 tree species following climate change in the Eastern United States

Science.gov (United States)

Louis R. Iverson; Anantha M. Prasad; Anantha M. Prasad

1998-01-01

Projected climate warming will potentially have profound effects on the earth?s biota, including a large redistribution of tree species. We developed models to evaluate potential shifts for 80 individual tree species in the eastern United States. First, environmental factors associated with current ranges of tree species were assessed using geographic information...

Geographical range and local abundance of tree species in China.

Directory of Open Access Journals (Sweden)

Haibao Ren

Full Text Available Most studies on the geographical distribution of species have utilized a few well-known taxa in Europe and North America, with little research in China and its wide range of climate and forest types. We assembled large datasets to quantify the geographic ranges of tree species in China and to test several biogeographic hypotheses: 1 whether locally abundant species tend to be geographically widespread; 2 whether species are more abundant towards their range-centers; and 3 how abundances are correlated between sites. Local abundances of 651 species were derived from four tree plots of 20-25 ha where all individuals ≥1 cm in stem diameter were mapped and identified taxonomically. Range sizes of these species across China were then estimated from over 460,000 geo-referenced records; a Bayesian approach was used, allowing careful measures of error of each range estimate. The log-transformed range sizes had a bell-shaped distribution with a median of 703,000 km(2, and >90% of 651 species had ranges >10(5 km(2. There was no relationship between local abundance and range size, and no evidence for species being more abundant towards their range-centers. Finally, species' abundances were positively correlated between sites. The widespread nature of most tree species in China suggests few are vulnerable to global extinction, and there is no indication of the double-peril that would result if rare species also had narrow ranges.

Ecological and economic determinants of invasive tree species on Alabama forestland

Science.gov (United States)

Anwar Hussain; Changyou Sun; Xiaoping Zhou; Ian A. Munn

2008-01-01

The spread of invasive tree species has caused increasing harm to the environment. This study was motivated by the considerations that earlier studies generally ignored the role of economic factors related to the occurrence and abundance of invasive species, and empirical analyses of invasive trees on forestland have been inadequate. We assessed the impact of...

Systematic adaptive cluster sampling for the assessment of rare tree species in Nepal

NARCIS (Netherlands)

Acharya, B.; Bhattarai, G.; Gier, de A.; Stein, A.

2000-01-01

Sampling to assess rare tree species poses methodic problems, because they may cluster and many plots with no such trees are to be expected. We used systematic adaptive cluster sampling (SACS) to sample three rare tree species in a forest area of about 40 ha in Nepal. We checked its applicability

Biomass models to estimate carbon stocks for hardwood tree species

Energy Technology Data Exchange (ETDEWEB)

Ruiz-Peinado, R.; Montero, G.; Rio, M. del

2012-11-01

To estimate forest carbon pools from forest inventories it is necessary to have biomass models or biomass expansion factors. In this study, tree biomass models were developed for the main hardwood forest species in Spain: Alnus glutinosa, Castanea sativa, Ceratonia siliqua, Eucalyptus globulus, Fagus sylvatica, Fraxinus angustifolia, Olea europaea var. sylvestris, Populus x euramericana, Quercus canariensis, Quercus faginea, Quercus ilex, Quercus pyrenaica and Quercus suber. Different tree biomass components were considered: stem with bark, branches of different sizes, above and belowground biomass. For each species, a system of equations was fitted using seemingly unrelated regression, fulfilling the additivity property between biomass components. Diameter and total height were explored as independent variables. All models included tree diameter whereas for the majority of species, total height was only considered in the stem biomass models and in some of the branch models. The comparison of the new biomass models with previous models fitted separately for each tree component indicated an improvement in the accuracy of the models. A mean reduction of 20% in the root mean square error and a mean increase in the model efficiency of 7% in comparison with recently published models. So, the fitted models allow estimating more accurately the biomass stock in hardwood species from the Spanish National Forest Inventory data. (Author) 45 refs.

Species-specific associations between overstory and understory tree species in a semideciduous tropical forest

Directory of Open Access Journals (Sweden)

Flaviana Maluf Souza

2015-03-01

Full Text Available We investigated the occurrence of associations between overstory and understory tree species in a semideciduous tropical forest. We identified and measured all trees of nine canopy species with diameter at breast height ≥4.8 cm in a 10.24 ha plot and recorded all individuals beneath their canopies ("understory individuals" within the same diameter class. The total density of understory individuals did not significantly differ under different overstory species. One overstory species (Ceiba speciosa showed higher understory species richness compared with five other species. There was a strong positive association between three overstory species (Esenbeckia leiocarpa, Savia dictyocarpa, and C. speciosa and the density of seven understory species (Balfourodendron riedelianum, Chrysophyllum gonocarpum, E. leiocarpa, Holocalyx balansae, Machaerium stipitatum, Rhaminidium elaeocarpum, and S. dictyocarpa. These results probably reflect the outcome of a complex set of interactions including facilitation and competition, and further studies are necessary to better understand the magnitude and type of the effects of individual overstory species on understory species. The occurrence of species-specific associations shown here reinforces the importance of non-random processes in structuring plant communities and suggest that the influence of overstory species on understory species in high-diversity forests may be more significant than previously thought.

First record in the Tropical Eastern Pacific of the exotic species Ficopomatus uschakovi (Polychaeta, Serpulidae

Directory of Open Access Journals (Sweden)

Rolando Bastida Zavala

2012-11-01

Full Text Available The exotic Indo-West-Pacific species, Ficopomatus uschakovi (Polychaeta, Serpulidae is recorded for the first time in the Tropical Eastern Pacific from two sites in La Encrucijada Biosphere Reserve, Chiapas, a coastal lagoon in the Pacific south of Mexico. The means of dispersal of this serpulid species still remains unclear, as the nearest port (Puerto Chiapas is 70 km to the south, and there are no port installations or shrimp cultures in the lagoon. The record of this serpulid species, apparently widely distributed in this coastal lagoon, has implications regarding possible effects on the brackish-water ecosystem, since the invasion event very well may have occurred several years ago. It is recommended that an exhaustive study be carried out in the coastal lagoons of Chiapas to evaluate the real distribution and the effects of this invasive species on the ecosystem. A complete description, including photographs and drawings, is provided.

Compounding and Extralabel Use of Drugs in Exotic Animal Medicine.

Science.gov (United States)

Powers, Lauren V; Davidson, Gigi

2018-05-01

Extralabel drug use is the use of a Food and Drug Administration (FDA)-approved drug in a manner different from what is stipulated on the approved label. Compounding is the process of preparing a medication in a manner not indicated on the label to create a formulation specifically tailored to the needs of an individual patient. Extralabel drug use and compounding are vital aspects of safe and effective drug delivery to patients in exotic animal practice. There are few FDA-approved drugs for exotic animal species, and many approved drugs for other species are not available in suitable formulations for use in exotic animals. Copyright © 2018 Elsevier Inc. All rights reserved.

Children prioritize virtual exotic biodiversity over local biodiversity.

Directory of Open Access Journals (Sweden)

Jean-Marie Ballouard

Full Text Available Environmental education is essential to stem current dramatic biodiversity loss, and childhood is considered as the key period for developing awareness and positive attitudes toward nature. Children are strongly influenced by the media, notably the internet, about biodiversity and conservation issues. However, most media focus on a few iconic, appealing, and usually exotic species. In addition, virtual activities are replacing field experiences. This situation may curb children knowledge and concerns about local biodiversity. Focusing our analyses on local versus exotic species, we examined the level of knowledge and the level of diversity of the animals that French schoolchildren are willing to protect, and whether these perceptions are mainly guided by information available in the internet. For that, we collected and compared two complementary data sets: 1 a questionnaire was administered to schoolchildren to assess their knowledge and consideration to protect animals, 2 an internet content analysis (i.e. Google searching sessions using keywords was performed to assess which animals are the most often represented. Our results suggest that the knowledge of children and their consideration to protect animal are mainly limited to internet contents, represented by a few exotic and charismatic species. The identification rate of local animals by schoolchildren was meager, suggesting a worrying disconnection from their local environment. Schoolchildren were more prone to protect "virtual" (unseen, exotic rather than local animal species. Our results reinforce the message that environmental education must also focus on outdoor activities to develop conservation consciousness and concerns about local biodiversity.

Soil phosphorus heterogeneity promotes tree species diversity and phylogenetic clustering in a tropical seasonal rainforest.

Science.gov (United States)

Xu, Wumei; Ci, Xiuqin; Song, Caiyun; He, Tianhua; Zhang, Wenfu; Li, Qiaoming; Li, Jie

2016-12-01

The niche theory predicts that environmental heterogeneity and species diversity are positively correlated in tropical forests, whereas the neutral theory suggests that stochastic processes are more important in determining species diversity. This study sought to investigate the effects of soil nutrient (nitrogen and phosphorus) heterogeneity on tree species diversity in the Xishuangbanna tropical seasonal rainforest in southwestern China. Thirty-nine plots of 400 m 2 (20 × 20 m) were randomly located in the Xishuangbanna tropical seasonal rainforest. Within each plot, soil nutrient (nitrogen and phosphorus) availability and heterogeneity, tree species diversity, and community phylogenetic structure were measured. Soil phosphorus heterogeneity and tree species diversity in each plot were positively correlated, while phosphorus availability and tree species diversity were not. The trees in plots with low soil phosphorus heterogeneity were phylogenetically overdispersed, while the phylogenetic structure of trees within the plots became clustered as heterogeneity increased. Neither nitrogen availability nor its heterogeneity was correlated to tree species diversity or the phylogenetic structure of trees within the plots. The interspecific competition in the forest plots with low soil phosphorus heterogeneity could lead to an overdispersed community. However, as heterogeneity increase, more closely related species may be able to coexist together and lead to a clustered community. Our results indicate that soil phosphorus heterogeneity significantly affects tree diversity in the Xishuangbanna tropical seasonal rainforest, suggesting that deterministic processes are dominant in this tropical forest assembly.

Growth and reproduction respond differently to climate in three Neotropical tree species.

Science.gov (United States)

Alfaro-Sánchez, Raquel; Muller-Landau, Helene C; Wright, S Joseph; Camarero, J Julio

2017-06-01

The response of tropical forests to anthropogenic climate change is critically important to future global carbon budgets, yet remains highly uncertain. Here, we investigate how precipitation, temperature, solar radiation and dry- and wet-season lengths are related to annual tree growth, flower production, and fruit production in three moist tropical forest tree species using long-term datasets from tree rings and litter traps in central Panama. We also evaluated how growth, flower, and fruit production were interrelated. We found that growth was positively correlated with wet-season precipitation in all three species: Jacaranda copaia (r = 0.63), Tetragastris panamensis (r = 0.39) and Trichilia tuberculata (r = 0.39). Flowering and fruiting in Jacaranda were negatively related to current-year dry-season rainfall and positively related to prior-year dry-season rainfall. Flowering in Tetragastris was negatively related to current-year annual mean temperature while Trichilia showed no significant relationships of reproduction with climate. Growth was significantly related to reproduction only in Tetragastris, where it was positively related to previous year fruiting. Our results suggest that tree growth in moist tropical forest tree species is generally reduced by drought events such as those associated with strong El Niño events. In contrast, interannual variation in reproduction is not generally associated with growth and has distinct and species-specific climate responses, with positive effects of El Niño events in some species. Understanding these contrasting climate effects on tree growth and reproduction is critical to predicting changes in tropical forest dynamics and species composition under climate change.

Crown-Level Tree Species Classification Using Integrated Airborne Hyperspectral and LIDAR Remote Sensing Data

Science.gov (United States)

Wang, Z.; Wu, J.; Wang, Y.; Kong, X.; Bao, H.; Ni, Y.; Ma, L.; Jin, J.

2018-05-01

Mapping tree species is essential for sustainable planning as well as to improve our understanding of the role of different trees as different ecological service. However, crown-level tree species automatic classification is a challenging task due to the spectral similarity among diversified tree species, fine-scale spatial variation, shadow, and underlying objects within a crown. Advanced remote sensing data such as airborne Light Detection and Ranging (LiDAR) and hyperspectral imagery offer a great potential opportunity to derive crown spectral, structure and canopy physiological information at the individual crown scale, which can be useful for mapping tree species. In this paper, an innovative approach was developed for tree species classification at the crown level. The method utilized LiDAR data for individual tree crown delineation and morphological structure extraction, and Compact Airborne Spectrographic Imager (CASI) hyperspectral imagery for pure crown-scale spectral extraction. Specifically, four steps were include: 1) A weighted mean filtering method was developed to improve the accuracy of the smoothed Canopy Height Model (CHM) derived from LiDAR data; 2) The marker-controlled watershed segmentation algorithm was, therefore, also employed to delineate the tree-level canopy from the CHM image in this study, and then individual tree height and tree crown were calculated according to the delineated crown; 3) Spectral features within 3 × 3 neighborhood regions centered on the treetops detected by the treetop detection algorithm were derived from the spectrally normalized CASI imagery; 4) The shape characteristics related to their crown diameters and heights were established, and different crown-level tree species were classified using the combination of spectral and shape characteristics. Analysis of results suggests that the developed classification strategy in this paper (OA = 85.12 %, Kc = 0.90) performed better than LiDAR-metrics method (OA = 79

Sampling procedures for inventory of commercial volume tree species in Amazon Forest.

Science.gov (United States)

Netto, Sylvio P; Pelissari, Allan L; Cysneiros, Vinicius C; Bonazza, Marcelo; Sanquetta, Carlos R

2017-01-01

The spatial distribution of tropical tree species can affect the consistency of the estimators in commercial forest inventories, therefore, appropriate sampling procedures are required to survey species with different spatial patterns in the Amazon Forest. For this, the present study aims to evaluate the conventional sampling procedures and introduce the adaptive cluster sampling for volumetric inventories of Amazonian tree species, considering the hypotheses that the density, the spatial distribution and the zero-plots affect the consistency of the estimators, and that the adaptive cluster sampling allows to obtain more accurate volumetric estimation. We use data from a census carried out in Jamari National Forest, Brazil, where trees with diameters equal to or higher than 40 cm were measured in 1,355 plots. Species with different spatial patterns were selected and sampled with simple random sampling, systematic sampling, linear cluster sampling and adaptive cluster sampling, whereby the accuracy of the volumetric estimation and presence of zero-plots were evaluated. The sampling procedures applied to species were affected by the low density of trees and the large number of zero-plots, wherein the adaptive clusters allowed concentrating the sampling effort in plots with trees and, thus, agglutinating more representative samples to estimate the commercial volume.

Forest tree species discrimination in western Himalaya using EO-1 Hyperion

Science.gov (United States)

George, Rajee; Padalia, Hitendra; Kushwaha, S. P. S.

2014-05-01

The information acquired in the narrow bands of hyperspectral remote sensing data has potential to capture plant species spectral variability, thereby improving forest tree species mapping. This study assessed the utility of spaceborne EO-1 Hyperion data in discrimination and classification of broadleaved evergreen and conifer forest tree species in western Himalaya. The pre-processing of 242 bands of Hyperion data resulted into 160 noise-free and vertical stripe corrected reflectance bands. Of these, 29 bands were selected through step-wise exclusion of bands (Wilk's Lambda). Spectral Angle Mapper (SAM) and Support Vector Machine (SVM) algorithms were applied to the selected bands to assess their effectiveness in classification. SVM was also applied to broadband data (Landsat TM) to compare the variation in classification accuracy. All commonly occurring six gregarious tree species, viz., white oak, brown oak, chir pine, blue pine, cedar and fir in western Himalaya could be effectively discriminated. SVM produced a better species classification (overall accuracy 82.27%, kappa statistic 0.79) than SAM (overall accuracy 74.68%, kappa statistic 0.70). It was noticed that classification accuracy achieved with Hyperion bands was significantly higher than Landsat TM bands (overall accuracy 69.62%, kappa statistic 0.65). Study demonstrated the potential utility of narrow spectral bands of Hyperion data in discriminating tree species in a hilly terrain.

Comparison of leaf-on and leaf-off ALS data for mapping riparian tree species

Science.gov (United States)

Laslier, Marianne; Ba, Antoine; Hubert-Moy, Laurence; Dufour, Simon

2017-10-01

Forest species composition is a fundamental indicator of forest study and management. However, describing forest species composition at large scales and of highly diverse populations remains an issue for which remote sensing can provide significant contribution, in particular, Airborne Laser Scanning (ALS) data. Riparian corridors are good examples of highly valuable ecosystems, with high species richness and large surface areas that can be time consuming and expensive to monitor with in situ measurements. Remote sensing could be useful to study them, but few studies have focused on monitoring riparian tree species using ALS data. This study aimed to determine which metrics derived from ALS data are best suited to identify and map riparian tree species. We acquired very high density leaf-on and leaf-off ALS data along the Sélune River (France). In addition, we inventoried eight main riparian deciduous tree species along the study site. After manual segmentation of the inventoried trees, we extracted 68 morphological and structural metrics from both leaf-on and leaf-off ALS point clouds. Some of these metrics were then selected using Sequential Forward Selection (SFS) algorithm. Support Vector Machine (SVM) classification results showed good accuracy with 7 metrics (0.77). Both leaf-on and leafoff metrics were kept as important metrics for distinguishing tree species. Results demonstrate the ability of 3D information derived from high density ALS data to identify riparian tree species using external and internal structural metrics. They also highlight the complementarity of leaf-on and leaf-off Lidar data for distinguishing riparian tree species.

Can tree species diversity be assessed with Landsat data in a temperate forest?

Science.gov (United States)

Arekhi, Maliheh; Yılmaz, Osman Yalçın; Yılmaz, Hatice; Akyüz, Yaşar Feyza

2017-10-28

The diversity of forest trees as an indicator of ecosystem health can be assessed using the spectral characteristics of plant communities through remote sensing data. The objectives of this study were to investigate alpha and beta tree diversity using Landsat data for six dates in the Gönen dam watershed of Turkey. We used richness and the Shannon and Simpson diversity indices to calculate tree alpha diversity. We also represented the relationship between beta diversity and remotely sensed data using species composition similarity and spectral distance similarity of sampling plots via quantile regression. A total of 99 sampling units, each 20 m × 20 m, were selected using geographically stratified random sampling method. Within each plot, the tree species were identified, and all of the trees with a diameter at breast height (dbh) larger than 7 cm were measured. Presence/absence and abundance data (tree species number and tree species basal area) of tree species were used to determine the relationship between richness and the Shannon and Simpson diversity indices, which were computed with ground field data, and spectral variables derived (2 × 2 pixels and 3 × 3 pixels) from Landsat 8 OLI data. The Shannon-Weiner index had the highest correlation. For all six dates, NDVI (normalized difference vegetation index) was the spectral variable most strongly correlated with the Shannon index and the tree diversity variables. The Ratio of green to red (VI) was the spectral variable least correlated with the tree diversity variables and the Shannon basal area. In both beta diversity curves, the slope of the OLS regression was low, while in the upper quantile, it was approximately twice the lower quantiles. The Jaccard index is closed to one with little difference in both two beta diversity approaches. This result is due to increasing the similarity between the sampling plots when they are located close to each other. The intercept differences between two

Anatomy and Disorders of the Oral Cavity of Miscellaneous Exotic Companion Mammals.

Science.gov (United States)

Lennox, Angela M; Miwa, Yasutsugu

2016-09-01

Unusual mammalian species such as the hedgehog, sugar glider, and miniature pig are encountered with increasing frequency in exotic companion medicine. Disease of the oral cavity can occur in any species; although occasionally encountered in exotic mammalian species, it is rarely described in the literature. Anatomy and dentition vary significantly; diagnosis and treatment are often extrapolated from that known in other species. The best-documented disease of the oral cavity in this group of species is oral neoplasia in the hedgehog. Copyright © 2016 Elsevier Inc. All rights reserved.

Architecture of 53 rain forest tree species differing in adult stature and shade tolerance

NARCIS (Netherlands)

Poorter, L.; Bongers, F.J.J.M.; Sterck, F.J.; Wöll, H.

2003-01-01

Tree architecture determines a tree's light capture, stability, and efficiency of crown growth. The hypothesis that light demand and adult stature of tree species within a community, independently of each other, determine species' architectural traits was tested by comparing 53 Liberian rain forest

Tree species diversity and distribution patterns in tropical forests of Garo Hills.

Science.gov (United States)

A. Kumar; B.G. Marcot; A. Saxena

2006-01-01

We analyzed phytosociological characteristics and diversity patterns of tree species of tropical forests of Garo Hills, western Meghalaya, northeast India. The main vegetation of the region included primary forests, secondary forests, and sal (Shorea robusta) plantations, with 162, 132, and 87 tree species, respectively. The Shannon-Wiener...

Multiquark exotics

International Nuclear Information System (INIS)

Lipkin, H.J.

1983-01-01

The question Are Anomalons Multiquark Exotics is discussed. It is concluded that so far there is no convincing experimental evidence for any multiquark exotic bound state nor for any exotic resonance. Except for the delta and S* there are no candidates for bound states and no firm theoretical predictions waiting to be tested. Exotic resonances may exist in the 1.5 to 2.0 GeV region and in the charmed sector, e.g., the charmed-strange exotics. The experimental search for multiquark resonances is still open and active

Optimal tree-stem bucking of northeastern species of China

Science.gov (United States)

Jingxin Wang; Chris B. LeDoux; Joseph McNeel

2004-01-01

An application of optimal tree-stem bucking to the northeastern tree species of China is reported. The bucking procedures used in this region are summarized, which are the basic guidelines for the optimal bucking design. The directed graph approach was adopted to generate the bucking patterns by using the network analysis labeling algorithm. A computer-based bucking...

Why do people use exotic plants in their local medical systems? A systematic review based on Brazilian local communities.

Science.gov (United States)

Medeiros, Patrícia Muniz de; Ferreira Júnior, Washington Soares; Ramos, Marcelo Alves; Silva, Taline Cristina da; Ladio, Ana Haydée; Albuquerque, Ulysses Paulino

2017-01-01

Efforts have been made to understand the processes that lead to the introduction of exotic species into local pharmacopoeias. Among those efforts, the diversification hypothesis predicts that exotic plants are introduced in local medical systems to amplify the repertoire of knowledge related to the treatment of diseases, filling blanks that were not occupied by native species. Based on such hypothesis, this study aimed to contribute to this discussion using the context of local Brazilian populations. We performed a systematic review of Brazilian studies up to 2011 involving medicinal plants, excluding those studies that presented a high risk of bias (because of sampling or plant identification problems). An analysis of similarities (ANOSIM) was conducted in different scales to test for differences in the repertoire of therapeutic indications treated using native and exotic species. We have found that although there is some overlap between native and exotic plants regarding their therapeutic indications and the body systems (BSs) that they treat, there are clear gaps present, that is, there are therapeutic indications and BSs treated that are exclusive to exotic species. This scenario enables the postulation of two alternative unfoldings of the diversification hypothesis, namely, (1) exotic species are initially introduced to fill gaps and undergo subsequent expansion of their use for medical purposes already addressed using native species and (2) exotic species are initially introduced to address problems already addressed using native species to diversify the repertoire of medicinal plants and to increase the resilience of medical systems. The reasons why exotic species may have a competitive advantage over the native ones, the implications of the introduction of exotic species for the resilience of medical systems, and the contexts in which autochthonous plants can gain strength to remain in pharmacopoeias are also discussed.

Genetic structure of two pseudoscorpion species living in tree hollows in Sweden

Directory of Open Access Journals (Sweden)

Ranius, T.

2002-12-01

Full Text Available Two saproxylic pseudoscorpions, Larca lata and Allochernes wideri, were compared in an analysis of genetic structure in southern Sweden. Allochernes wideri is a relatively widely distributed species that occurs in single-standing trees and in small tree hollows, while L. lata is on the Swedish red list and confined to larger assemblages of very old trees with hollows containing large amounts of wood mould. In A. wideri, the polymorphism of PGM was used, whereas in L. lata the variation for PGI was studied. The genetic differentiation between trees within a site was low for both species, indicating that the migration between nearby trees is considerable despite the fact that phoretic dispersal has only been occasionally observed in these species. Between sites, situated four to 900 km from each other, the genetic differentiation was small both in A. wideri and L. lata with no difference between the species, when considered on the mainland only. The small differentiation suggests the habitat was fragmented recently (100-170 years ago. The relation between the rate of migration and long-term population survival and the risk of mis-interpretation due to selection for alleles is discussed

Acceptance and suitability of novel trees for Orthotomicus erosus, an exotic bark beetle in North America

Science.gov (United States)

A.J. Walter; R.C. Venette; S.A. Kells

2010-01-01

To predict whether an herbivorous pest insect will establish in a new area, the potential host plants must be known. For invading bark beetles, adults must recognize and accept trees suitable for larval development. The preference-performance hypothesis predicts that adults will select host species that maximize the fitness of their offspring. We tested five species of...

Tree diversity and species identity effects on soil fungi, protists and animals are context dependent.

Science.gov (United States)

Tedersoo, Leho; Bahram, Mohammad; Cajthaml, Tomáš; Põlme, Sergei; Hiiesalu, Indrek; Anslan, Sten; Harend, Helery; Buegger, Franz; Pritsch, Karin; Koricheva, Julia; Abarenkov, Kessy

2016-02-01

Plant species richness and the presence of certain influential species (sampling effect) drive the stability and functionality of ecosystems as well as primary production and biomass of consumers. However, little is known about these floristic effects on richness and community composition of soil biota in forest habitats owing to methodological constraints. We developed a DNA metabarcoding approach to identify the major eukaryote groups directly from soil with roughly species-level resolution. Using this method, we examined the effects of tree diversity and individual tree species on soil microbial biomass and taxonomic richness of soil biota in two experimental study systems in Finland and Estonia and accounted for edaphic variables and spatial autocorrelation. Our analyses revealed that the effects of tree diversity and individual species on soil biota are largely context dependent. Multiple regression and structural equation modelling suggested that biomass, soil pH, nutrients and tree species directly affect richness of different taxonomic groups. The community composition of most soil organisms was strongly correlated due to similar response to environmental predictors rather than causal relationships. On a local scale, soil resources and tree species have stronger effect on diversity of soil biota than tree species richness per se.

Predicting spatial variations of tree species richness in tropical forests from high-resolution remote sensing.

Science.gov (United States)

Fricker, Geoffrey A; Wolf, Jeffrey A; Saatchi, Sassan S; Gillespie, Thomas W

2015-10-01

There is an increasing interest in identifying theories, empirical data sets, and remote-sensing metrics that can quantify tropical forest alpha diversity at a landscape scale. Quantifying patterns of tree species richness in the field is time consuming, especially in regions with over 100 tree species/ha. We examine species richness in a 50-ha plot in Barro Colorado Island in Panama and test if biophysical measurements of canopy reflectance from high-resolution satellite imagery and detailed vertical forest structure and topography from light detection and ranging (lidar) are associated with species richness across four tree size classes (>1, 1-10, >10, and >20 cm dbh) and three spatial scales (1, 0.25, and 0.04 ha). We use the 2010 tree inventory, including 204,757 individuals belonging to 301 species of freestanding woody plants or 166 ± 1.5 species/ha (mean ± SE), to compare with remote-sensing data. All remote-sensing metrics became less correlated with species richness as spatial resolution decreased from 1.0 ha to 0.04 ha and tree size increased from 1 cm to 20 cm dbh. When all stems with dbh > 1 cm in 1-ha plots were compared to remote-sensing metrics, standard deviation in canopy reflectance explained 13% of the variance in species richness. The standard deviations of canopy height and the topographic wetness index (TWI) derived from lidar were the best metrics to explain the spatial variance in species richness (15% and 24%, respectively). Using multiple regression models, we made predictions of species richness across Barro Colorado Island (BCI) at the 1-ha spatial scale for different tree size classes. We predicted variation in tree species richness among all plants (adjusted r² = 0.35) and trees with dbh > 10 cm (adjusted r² = 0.25). However, the best model results were for understory trees and shrubs (dbh 1-10 cm) (adjusted r² = 0.52) that comprise the majority of species richness in tropical forests. Our results indicate that high

Is Tree Species Diversity or Species Identity the More Important Driver of Soil Carbon Stocks, C/N Ratio, and pH?

DEFF Research Database (Denmark)

Dawud, Seid Muhie; Raulund-Rasmussen, Karsten; Domisch, Timo

2016-01-01

We explored tree species diversity effects on soil C stock, C/N ratio, and pH as compared with effects of tree species identity. We sampled forest floors and mineral soil (0–40 cm) in a diversity gradient of 1–5 tree species composed of conifers and broadleaves in Białowieża Forest, Poland...... mechanism for higher root carbon input and in turn a deeper distribution of C in diverse forests. Diversity and identity affected soil pH in topsoil with positive and negative impacts, respectively. More diverse forests would lead to higher soil nutrient status as reflected by higher topsoil p......H, but there was a slight negative effect on N status as indicated by higher C/N ratios in the deeper layers. We conclude that tree species diversity increases soil C stocks and nutrient status to some extent, but tree species identity is a stronger driver of the studied soil properties, particularly in the topsoil....

Tree species traits influence soil physical, chemical, and biological properties in high elevation forests.

Directory of Open Access Journals (Sweden)

Edward Ayres

Full Text Available BACKGROUND: Previous studies have shown that plants often have species-specific effects on soil properties. In high elevation forests in the Southern Rocky Mountains, North America, areas that are dominated by a single tree species are often adjacent to areas dominated by another tree species. Here, we assessed soil properties beneath adjacent stands of trembling aspen, lodgepole pine, and Engelmann spruce, which are dominant tree species in this region and are distributed widely in North America. We hypothesized that soil properties would differ among stands dominated by different tree species and expected that aspen stands would have higher soil temperatures due to their open structure, which, combined with higher quality litter, would result in increased soil respiration rates, nitrogen availability, and microbial biomass, and differences in soil faunal community composition. METHODOLOGY/PRINCIPAL FINDINGS: We assessed soil physical, chemical, and biological properties at four sites where stands of aspen, pine, and spruce occurred in close proximity to one-another in the San Juan Mountains, Colorado. Leaf litter quality differed among the tree species, with the highest nitrogen (N concentration and lowest lignin:N in aspen litter. Nitrogen concentration was similar in pine and spruce litter, but lignin:N was highest in pine litter. Soil temperature and moisture were highest in aspen stands, which, in combination with higher litter quality, probably contributed to faster soil respiration rates from stands of aspen. Soil carbon and N content, ammonium concentration, and microbial biomass did not differ among tree species, but nitrate concentration was highest in aspen soil and lowest in spruce soil. In addition, soil fungal, bacterial, and nematode community composition and rotifer, collembolan, and mesostigmatid mite abundance differed among the tree species, while the total abundance of nematodes, tardigrades, oribatid mites, and prostigmatid

Ecological characterization of two species of exotic fish, pumpkinseed sunfish (Lepomis gibbosus) and largemouth bass (Micropterus salmoides) in the international Minho river

OpenAIRE

Ana Cristina Lages; Carlos Antunes

2015-01-01

The introduction of exotic species is considered the main cause for the decline of native species. The largemouth bass (Micropterus salmoides) and pumpkinseed sunfish (Lepomis gibbosus) are two native species from North America, introduced in Portugal to enhance sport fishing. However, their diet and great adaptability made them considered predatory and harmful. In order to understand the ecological impact of M. salmoides and L. gibbosus in the international section of the Minho River, three ...

How much does climate change threaten European forest tree species distributions?

Science.gov (United States)

Dyderski, Marcin K; Paź, Sonia; Frelich, Lee E; Jagodziński, Andrzej M

2018-03-01

Although numerous species distribution models have been developed, most were based on insufficient distribution data or used older climate change scenarios. We aimed to quantify changes in projected ranges and threat level by the years 2061-2080, for 12 European forest tree species under three climate change scenarios. We combined tree distribution data from the Global Biodiversity Information Facility, EUFORGEN, and forest inventories, and we developed species distribution models using MaxEnt and 19 bioclimatic variables. Models were developed for three climate change scenarios-optimistic (RCP2.6), moderate (RCP4.5), and pessimistic (RPC8.5)-using three General Circulation Models, for the period 2061-2080. Our study revealed different responses of tree species to projected climate change. The species may be divided into three groups: "winners"-mostly late-successional species: Abies alba, Fagus sylvatica, Fraxinus excelsior, Quercus robur, and Quercus petraea; "losers"-mostly pioneer species: Betula pendula, Larix decidua, Picea abies, and Pinus sylvestris; and alien species-Pseudotsuga menziesii, Quercus rubra, and Robinia pseudoacacia, which may be also considered as "winners." Assuming limited migration, most of the species studied would face a significant decrease in suitable habitat area. The threat level was highest for species that currently have the northernmost distribution centers. Ecological consequences of the projected range contractions would be serious for both forest management and nature conservation. © 2017 John Wiley & Sons Ltd.

New flux based dose–response relationships for ozone for European forest tree species

International Nuclear Information System (INIS)

Büker, P.; Feng, Z.; Uddling, J.; Briolat, A.; Alonso, R.; Braun, S.; Elvira, S.; Gerosa, G.; Karlsson, P.E.; Le Thiec, D.

2015-01-01

To derive O 3 dose–response relationships (DRR) for five European forest trees species and broadleaf deciduous and needleleaf tree plant functional types (PFTs), phytotoxic O 3 doses (PODy) were related to biomass reductions. PODy was calculated using a stomatal flux model with a range of cut-off thresholds (y) indicative of varying detoxification capacities. Linear regression analysis showed that DRR for PFT and individual tree species differed in their robustness. A simplified parameterisation of the flux model was tested and showed that for most non-Mediterranean tree species, this simplified model led to similarly robust DRR as compared to a species- and climate region-specific parameterisation. Experimentally induced soil water stress was not found to substantially reduce PODy, mainly due to the short duration of soil water stress periods. This study validates the stomatal O 3 flux concept and represents a step forward in predicting O 3 damage to forests in a spatially and temporally varying climate. - Highlights: • We present new ozone flux based dose–response relationships for European trees. • The model-based study accounted for the soil water effect on stomatal flux. • Different statistically derived ozone flux thresholds were applied. • Climate region specific parameterisation often outperformed simplified parameterisation. • Findings could help redefining critical levels for ozone effects on trees. - New stomatal flux based ozone dose–response relationships for tree species are derived for the regional risk assessment of ozone effects on European forest ecosystems.

Light-dependent leaf trait variation in 43 tropical dry forest tree species

NARCIS (Netherlands)

Markesteijn, L.; Poorter, L.; Bongers, F.J.J.M.

2007-01-01

Our understanding of leaf acclimation in relation to irradiance of fully grown or juvenile trees is mainly based on research involving tropical wet forest species. We studied sun¿shade plasticity of 24 leaf traits of 43 tree species in a Bolivian dry deciduous forest. Sampling was confined to small

A novel approach to internal crown characterization for coniferous tree species classification

Science.gov (United States)

Harikumar, A.; Bovolo, F.; Bruzzone, L.

2016-10-01

The knowledge about individual trees in forest is highly beneficial in forest management. High density small foot- print multi-return airborne Light Detection and Ranging (LiDAR) data can provide a very accurate information about the structural properties of individual trees in forests. Every tree species has a unique set of crown structural characteristics that can be used for tree species classification. In this paper, we use both the internal and external crown structural information of a conifer tree crown, derived from a high density small foot-print multi-return LiDAR data acquisition for species classification. Considering the fact that branches are the major building blocks of a conifer tree crown, we obtain the internal crown structural information using a branch level analysis. The structure of each conifer branch is represented using clusters in the LiDAR point cloud. We propose the joint use of the k-means clustering and geometric shape fitting, on the LiDAR data projected onto a novel 3-dimensional space, to identify branch clusters. After mapping the identified clusters back to the original space, six internal geometric features are estimated using a branch-level analysis. The external crown characteristics are modeled by using six least correlated features based on cone fitting and convex hull. Species classification is performed using a sparse Support Vector Machines (sparse SVM) classifier.

Evolutionary patterns of range size, abundance and species richness in Amazonian angiosperm trees

Directory of Open Access Journals (Sweden)

Kyle Dexter

2016-09-01

Full Text Available Amazonian tree species vary enormously in their total abundance and range size, while Amazonian tree genera vary greatly in species richness. The drivers of this variation are not well understood. Here, we construct a phylogenetic hypothesis that represents half of Amazonian tree genera in order to contribute to explaining the variation. We find several clear, broad-scale patterns. Firstly, there is significant phylogenetic signal for all three characteristics; closely related genera tend to have similar numbers of species and similar mean range size and abundance. Additionally, the species richness of genera shows a significant, negative relationship with the mean range size and abundance of their constituent species. Our results suggest that phylogenetically correlated intrinsic factors, namely traits of the genera themselves, shape among lineage variation in range size, abundance and species richness. We postulate that tree stature may be one particularly relevant trait. However, other traits may also be relevant, and our study reinforces the need for ambitious compilations of trait data for Amazonian trees. In the meantime, our study shows how large-scale phylogenies can help to elucidate, and contribute to explaining, macroecological and macroevolutionary patterns in hyperdiverse, yet poorly understood regions like the Amazon Basin.

CROWN-LEVEL TREE SPECIES CLASSIFICATION USING INTEGRATED AIRBORNE HYPERSPECTRAL AND LIDAR REMOTE SENSING DATA

Directory of Open Access Journals (Sweden)

Z. Wang

2018-05-01

Full Text Available Mapping tree species is essential for sustainable planning as well as to improve our understanding of the role of different trees as different ecological service. However, crown-level tree species automatic classification is a challenging task due to the spectral similarity among diversified tree species, fine-scale spatial variation, shadow, and underlying objects within a crown. Advanced remote sensing data such as airborne Light Detection and Ranging (LiDAR and hyperspectral imagery offer a great potential opportunity to derive crown spectral, structure and canopy physiological information at the individual crown scale, which can be useful for mapping tree species. In this paper, an innovative approach was developed for tree species classification at the crown level. The method utilized LiDAR data for individual tree crown delineation and morphological structure extraction, and Compact Airborne Spectrographic Imager (CASI hyperspectral imagery for pure crown-scale spectral extraction. Specifically, four steps were include: 1 A weighted mean filtering method was developed to improve the accuracy of the smoothed Canopy Height Model (CHM derived from LiDAR data; 2 The marker-controlled watershed segmentation algorithm was, therefore, also employed to delineate the tree-level canopy from the CHM image in this study, and then individual tree height and tree crown were calculated according to the delineated crown; 3 Spectral features within 3 × 3 neighborhood regions centered on the treetops detected by the treetop detection algorithm were derived from the spectrally normalized CASI imagery; 4 The shape characteristics related to their crown diameters and heights were established, and different crown-level tree species were classified using the combination of spectral and shape characteristics. Analysis of results suggests that the developed classification strategy in this paper (OA = 85.12 %, Kc = 0.90 performed better than Li

[Mahalanobis distance based hyperspectral characteristic discrimination of leaves of different desert tree species].

Science.gov (United States)

Lin, Hai-jun; Zhang, Hui-fang; Gao, Ya-qi; Li, Xia; Yang, Fan; Zhou, Yan-fei

2014-12-01

The hyperspectral reflectance of Populus euphratica, Tamarix hispida, Haloxylon ammodendron and Calligonum mongolicum in the lower reaches of Tarim River and Turpan Desert Botanical Garden was measured by using the HR-768 field-portable spectroradiometer. The method of continuum removal, first derivative reflectance and second derivative reflectance were used to deal with the original spectral data of four tree species. The method of Mahalanobis Distance was used to select the bands with significant differences in the original spectral data and transform spectral data to identify the different tree species. The progressive discrimination analyses were used to test the selective bands used to identify different tree species. The results showed that The Mahalanobis Distance method was an effective method in feature band extraction. The bands for identifying different tree species were most near-infrared bands. The recognition accuracy of four methods was 85%, 93.8%, 92.4% and 95.5% respectively. Spectrum transform could improve the recognition accuracy. The recognition accuracy of different research objects and different spectrum transform methods were different. The research provided evidence for desert tree species classification, monitoring biodiversity and the analysis of area in desert by using large scale remote sensing method.

Marine exotic isopods from the Iberian Peninsula and nearby waters.

Science.gov (United States)

Martínez-Laiz, Gemma; Ros, Macarena; Guerra-García, José M

2018-01-01

Effective management of marine bioinvasions starts with prevention, communication among the scientific community and comprehensive updated data on the distribution ranges of exotic species. Despite being a hotspot for introduction due to numerous shipping routes converging at the Strait of Gibraltar, knowledge of marine exotics in the Iberian Peninsula is scarce, especially of abundant but small-sized and taxonomically challenging taxa such as the Order Isopoda. To fill this gap, we conducted several sampling surveys in 44 marinas and provide the first comprehensive study of marine exotic isopods from the Iberian Peninsula, the southern side of the Strait of Gibraltar (northern Africa) and the Balearic Islands. Exotic species included Ianiropsis serricaudis (first record for the Iberian Peninsula and Lusitanian marine province), Paracerceis sculpta (first record for the Alboran Sea ecoregion), Paradella dianae , Paranthura japonica (earliest record for the Iberian Peninsula) and Sphaeroma walkeri . Photographs with morphological details for identification for non-taxonomic experts are provided, their worldwide distribution is updated and patterns of invasion are discussed. We report an expansion in the distribution range of all species, especially at the Strait of Gibraltar and nearby areas. Ianiropsis serricaudis and Paranthura japonica are polyvectic, with shellfish trade and recreational boating being most probable vectors for their introduction and secondary spread. The subsequent finding of the studied species in additional marinas over the years points at recreational boating as a vector and indicates a future spread. We call for attention to reduce lags in the detection and reporting of small-size exotics, which usually remain overlooked or underestimated until the invasion process is at an advanced stage.

The emerald ash borer: a new exotic pest in North America

Science.gov (United States)

Robert A. Haack; Eduard Jendak; Liu Houping; Keneth R. Marchant; Toby R. Petrice; Therese M. Poland; Hui Ye

2002-01-01

Yet another new exotic forest pest has been discovered in North America, and this time the infestation is centered in Michigan and Ontario. In May and June 2002, adults of an unidentified buprestid beetle were collected from ash (Fraxinus) trees in the Detroit area of southeastern Michigan.

In vitro propagation of tropical hardwood tree species — A review (2001-2011)

Science.gov (United States)

Paula M. Pijut; Rochelle R. Beasley; Shaneka S. Lawson; Kaitlin J. Palla; Micah E. Stevens; Ying. Wang

2012-01-01

Tropical hardwood tree species are important economically and ecologically, and play a significant role in the biodiversity of plant and animal species within an ecosystem. There are over 600 species of tropical timbers in the world, many of which are commercially valuable in the international trade of plywood, roundwood, sawnwood, and veneer. Many of these tree...

Management and conservation of tree squirrels: the importance of endemism, species richness, and forest condition

Science.gov (United States)

John L. Koprowski

2005-01-01

Tree squirrels are excellent indicators of forest health yet the taxon is understudied. Most tree squirrels in the Holarctic Region are imperiled with some level of legal protection. The Madrean Archipelago is the epicenter for tree squirrel diversity in North America with 5 endemic species and 2 introduced species. Most species of the region are poorly studied in...

Statistical analysis of texture in trunk images for biometric identification of tree species.

Science.gov (United States)

Bressane, Adriano; Roveda, José A F; Martins, Antônio C G

2015-04-01

The identification of tree species is a key step for sustainable management plans of forest resources, as well as for several other applications that are based on such surveys. However, the present available techniques are dependent on the presence of tree structures, such as flowers, fruits, and leaves, limiting the identification process to certain periods of the year. Therefore, this article introduces a study on the application of statistical parameters for texture classification of tree trunk images. For that, 540 samples from five Brazilian native deciduous species were acquired and measures of entropy, uniformity, smoothness, asymmetry (third moment), mean, and standard deviation were obtained from the presented textures. Using a decision tree, a biometric species identification system was constructed and resulted to a 0.84 average precision rate for species classification with 0.83accuracy and 0.79 agreement. Thus, it can be considered that the use of texture presented in trunk images can represent an important advance in tree identification, since the limitations of the current techniques can be overcome.

Water-use efficiency within a selection of indigenous and exotic tree species in South Africa as determined using sap flow and biomass measurements

CSIR Research Space (South Africa)

Gush, Mark B

2008-10-01

Full Text Available South Africa has limited indigenous timber-producing forests. Recognition early in the 20th century that demand for timber had exceeded the supply available from indigenous forests forced South Africa to accelerate the expansion of its own exotic...

Calcium weathering in forested soils and the effedt of different tree species

NARCIS (Netherlands)

Dijkstra, F.A.; Breemen, van N.; Jongmans, A.G.; Davies, G.R.; Likens, G.E.

2003-01-01

Soil weathering can be an important mechanism to neutralize acidity in forest soils. Tree species may differ in their effect on or response to soil weathering. We used soil mineral data and the natural strontium isotope ratio Sr-87/Sr-86 as a tracer to identify the effect of tree species on the Ca

tree and shrub species integration in the crop-livestock farming ...

African Journals Online (AJOL)

Prof. Adipala Ekwamu

cash for investment in the required activities, easy land certification and market opportunity for tree and shrub products. The tree and shrub .... for its consistency, logical flow, coding and length were amended. .... TABLE 2. List of shrub species identified in the watershed of highlands of central Ethiopia. Scientific name.

Tree species diversity mitigates disturbance impacts on the forest carbon cycle.

Science.gov (United States)

Silva Pedro, Mariana; Rammer, Werner; Seidl, Rupert

2015-03-01

Biodiversity fosters the functioning and stability of forest ecosystems and, consequently, the provision of crucial ecosystem services that support human well-being and quality of life. In particular, it has been suggested that tree species diversity buffers ecosystems against the impacts of disturbances, a relationship known as the "insurance hypothesis". Natural disturbances have increased across Europe in recent decades and climate change is expected to amplify the frequency and severity of disturbance events. In this context, mitigating disturbance impacts and increasing the resilience of forest ecosystems is of growing importance. We have tested how tree species diversity modulates the impact of disturbance on net primary production and the total carbon stored in living biomass for a temperate forest landscape in Central Europe. Using the simulation model iLand to study the effect of different disturbance regimes on landscapes with varying levels of tree species richness, we found that increasing diversity generally reduces the disturbance impact on carbon storage and uptake, but that this effect weakens or even reverses with successional development. Our simulations indicate a clear positive relationship between diversity and resilience, with more diverse systems experiencing lower disturbance-induced variability in their trajectories of ecosystem functioning. We found that positive effects of tree species diversity are mainly driven by an increase in functional diversity and a modulation of traits related to recolonization and resource usage. The results of our study suggest that increasing tree species diversity could mitigate the effects of intensifying disturbance regimes on ecosystem functioning and improve the robustness of forest carbon storage and the role of forests in climate change mitigation.

The Role of Native Tree Species on Leaf Breakdown Dynamics of the Invasive Tree of Heaven ( Ailanthus altissima) in an Urban Stream

Science.gov (United States)

Swan, C.; Healey, B.

2005-05-01

Anthropogenic disturbance of ecosystem processes is increasingly being explored in urban settings. One profound impact is the striking increase in the distribution of invasive plant species. For example, Tree of Heaven (Ailanthus altissima, TOH), introduced into the U.S. from Asia in 1784, is a successful colonist of recently deforested habitats. As a result, remnant patches in urban ecosystems have become overrun with this tree species, excluding native species via fast growth and allelopathy. While suffering from human-induced degradation, urban streams still support food webs that function to process riparian-derived organic matter (e.g., leaves, wood). The purpose of this study was to (1) estimate leaf litter breakdown of native tree leaves and those of TOH in an urban stream, (2) study the detritivore feeding rate of the same leaf species, and (3) determine if increasing native species richness of leaf litter can alter breakdown of TOH leaves. Field manipulations of leaf pack composition were done in a highly urbanized stream (>30% upstream urban land use) in Baltimore County, Maryland, USA. This was complimented by a series of laboratory feeding experiments employing similar leaf treatments and local shredding invertebrate taxa. Breakdown of TOH alone was extremely rapid, significantly exceeding that of all native tree species employed. Furthermore, mixing TOH with native tree species, red maple and white oak, substantially reduced TOH decay compared to decay of TOH alone. However, supporting laboratory studies showed that TOH was a preferred resource by shredding invertebrates over all native species. Subsequent analysis of the structural integrity of all leaf species revealed that TOH was the least resistant to force, possibly explaining the counterintuitive decrease of TOH decay in mixtures. We interpret this as meaning the stream invertebrates, while preferring to consume TOH, appeared not to influence TOH decay in mixtures with native species. Instead

Herbs versus Trees: Influences on Teenagers' Knowledge of Plant Species

Science.gov (United States)

Lückmann, Katrin; Menzel, Susanne

2014-01-01

The study reports on species knowledge among German adolescents (n = 507) as: (1) self-assessed evaluation of one's species knowledge; and (2) factual knowledge about popular local herbs and trees. Besides assessing species knowledge, we were interested in whether selected demographic factors, environmental attitude (as measured through the New…

No evidence for consistent long-term growth stimulation of 13 tropical tree species: results from tree-ring analysis.

Science.gov (United States)

Groenendijk, Peter; van der Sleen, Peter; Vlam, Mart; Bunyavejchewin, Sarayudh; Bongers, Frans; Zuidema, Pieter A

2015-10-01

The important role of tropical forests in the global carbon cycle makes it imperative to assess changes in their carbon dynamics for accurate projections of future climate-vegetation feedbacks. Forest monitoring studies conducted over the past decades have found evidence for both increasing and decreasing growth rates of tropical forest trees. The limited duration of these studies restrained analyses to decadal scales, and it is still unclear whether growth changes occurred over longer time scales, as would be expected if CO2 -fertilization stimulated tree growth. Furthermore, studies have so far dealt with changes in biomass gain at forest-stand level, but insights into species-specific growth changes - that ultimately determine community-level responses - are lacking. Here, we analyse species-specific growth changes on a centennial scale, using growth data from tree-ring analysis for 13 tree species (~1300 trees), from three sites distributed across the tropics. We used an established (regional curve standardization) and a new (size-class isolation) growth-trend detection method and explicitly assessed the influence of biases on the trend detection. In addition, we assessed whether aggregated trends were present within and across study sites. We found evidence for decreasing growth rates over time for 8-10 species, whereas increases were noted for two species and one showed no trend. Additionally, we found evidence for weak aggregated growth decreases at the site in Thailand and when analysing all sites simultaneously. The observed growth reductions suggest deteriorating growth conditions, perhaps due to warming. However, other causes cannot be excluded, such as recovery from large-scale disturbances or changing forest dynamics. Our findings contrast growth patterns that would be expected if elevated CO2 would stimulate tree growth. These results suggest that commonly assumed growth increases of tropical forests may not occur, which could lead to erroneous

Are bison exotic in the Wrangell-St. Elias National Park and Preserve?

Science.gov (United States)

Peek, James M.; Miquelle, Dale G.; Wright, R. Gerald

1987-03-01

The effect of past distributions of animal populations now extinct in an area from unknown causes is considered relative to their status as exotic or native in national parks. The example is the bison (Bison bison) on the Copper and Chitina river drainages in Alaska in the USA which was introduced prior to establishment of Wrangell-St. Elias National Park and Preserve. The fossil record suggests that bison were present as recently as 500 years ago in Alaska. The policy of the US National Park Service to maintain natural ecosystems and restrict or eliminate exotic species raises the issue of whether this species should be treated as exotic or native.

Hunting, Exotic Carnivores, and Habitat Loss: Anthropogenic Effects on a Native Carnivore Community, Madagascar.

Science.gov (United States)

Farris, Zach J; Golden, Christopher D; Karpanty, Sarah; Murphy, Asia; Stauffer, Dean; Ratelolahy, Felix; Andrianjakarivelo, Vonjy; Holmes, Christopher M; Kelly, Marcella J

2015-01-01

The wide-ranging, cumulative, negative effects of anthropogenic disturbance, including habitat degradation, exotic species, and hunting, on native wildlife has been well documented across a range of habitats worldwide with carnivores potentially being the most vulnerable due to their more extinction prone characteristics. Investigating the effects of anthropogenic pressures on sympatric carnivores is needed to improve our ability to develop targeted, effective management plans for carnivore conservation worldwide. Utilizing photographic, line-transect, and habitat sampling, as well as landscape analyses and village-based bushmeat hunting surveys, we provide the first investigation of how multiple forms of habitat degradation (fragmentation, exotic carnivores, human encroachment, and hunting) affect carnivore occupancy across Madagascar's largest protected area: the Masoala-Makira landscape. We found that as degradation increased, native carnivore occupancy and encounter rates decreased while exotic carnivore occupancy and encounter rates increased. Feral cats (Felis species) and domestic dogs (Canis familiaris) had higher occupancy than half of the native carnivore species across Madagascar's largest protected landscape. Bird and small mammal encounter rates were negatively associated with exotic carnivore occupancy, but positively associated with the occupancy of four native carnivore species. Spotted fanaloka (Fossa fossana) occupancy was constrained by the presence of exotic feral cats and exotic small Indian civet (Viverricula indica). Hunting was intense across the four study sites where hunting was studied, with the highest rates for the small Indian civet (mean=90 individuals consumed/year), the ring-tailed vontsira (Galidia elegans) (mean=58 consumed/year), and the fosa (Cryptoprocta ferox) (mean=31 consumed/year). Our modeling results suggest hunters target intact forest where carnivore occupancy, abundance, and species richness, are highest. These various

Hunting, Exotic Carnivores, and Habitat Loss: Anthropogenic Effects on a Native Carnivore Community, Madagascar.

Directory of Open Access Journals (Sweden)

Zach J Farris

Full Text Available The wide-ranging, cumulative, negative effects of anthropogenic disturbance, including habitat degradation, exotic species, and hunting, on native wildlife has been well documented across a range of habitats worldwide with carnivores potentially being the most vulnerable due to their more extinction prone characteristics. Investigating the effects of anthropogenic pressures on sympatric carnivores is needed to improve our ability to develop targeted, effective management plans for carnivore conservation worldwide. Utilizing photographic, line-transect, and habitat sampling, as well as landscape analyses and village-based bushmeat hunting surveys, we provide the first investigation of how multiple forms of habitat degradation (fragmentation, exotic carnivores, human encroachment, and hunting affect carnivore occupancy across Madagascar's largest protected area: the Masoala-Makira landscape. We found that as degradation increased, native carnivore occupancy and encounter rates decreased while exotic carnivore occupancy and encounter rates increased. Feral cats (Felis species and domestic dogs (Canis familiaris had higher occupancy than half of the native carnivore species across Madagascar's largest protected landscape. Bird and small mammal encounter rates were negatively associated with exotic carnivore occupancy, but positively associated with the occupancy of four native carnivore species. Spotted fanaloka (Fossa fossana occupancy was constrained by the presence of exotic feral cats and exotic small Indian civet (Viverricula indica. Hunting was intense across the four study sites where hunting was studied, with the highest rates for the small Indian civet (mean=90 individuals consumed/year, the ring-tailed vontsira (Galidia elegans (mean=58 consumed/year, and the fosa (Cryptoprocta ferox (mean=31 consumed/year. Our modeling results suggest hunters target intact forest where carnivore occupancy, abundance, and species richness, are highest

Hunting, Exotic Carnivores, and Habitat Loss: Anthropogenic Effects on a Native Carnivore Community, Madagascar

Science.gov (United States)

Farris, Zach J.; Golden, Christopher D.; Karpanty, Sarah; Murphy, Asia; Stauffer, Dean; Ratelolahy, Felix; Andrianjakarivelo, Vonjy; Holmes, Christopher M.; Kelly, Marcella J.

2015-01-01

The wide-ranging, cumulative, negative effects of anthropogenic disturbance, including habitat degradation, exotic species, and hunting, on native wildlife has been well documented across a range of habitats worldwide with carnivores potentially being the most vulnerable due to their more extinction prone characteristics. Investigating the effects of anthropogenic pressures on sympatric carnivores is needed to improve our ability to develop targeted, effective management plans for carnivore conservation worldwide. Utilizing photographic, line-transect, and habitat sampling, as well as landscape analyses and village-based bushmeat hunting surveys, we provide the first investigation of how multiple forms of habitat degradation (fragmentation, exotic carnivores, human encroachment, and hunting) affect carnivore occupancy across Madagascar’s largest protected area: the Masoala-Makira landscape. We found that as degradation increased, native carnivore occupancy and encounter rates decreased while exotic carnivore occupancy and encounter rates increased. Feral cats (Felis species) and domestic dogs (Canis familiaris) had higher occupancy than half of the native carnivore species across Madagascar’s largest protected landscape. Bird and small mammal encounter rates were negatively associated with exotic carnivore occupancy, but positively associated with the occupancy of four native carnivore species. Spotted fanaloka (Fossa fossana) occupancy was constrained by the presence of exotic feral cats and exotic small Indian civet (Viverricula indica). Hunting was intense across the four study sites where hunting was studied, with the highest rates for the small Indian civet (x¯ = 90 individuals consumed/year), the ring-tailed vontsira (Galidia elegans) (x¯ = 58 consumed/year), and the fosa (Cryptoprocta ferox) (x¯ = 31 consumed/year). Our modeling results suggest hunters target intact forest where carnivore occupancy, abundance, and species richness, are

Invasive plant suppresses the growth of native tree seedlings by disrupting belowground mutualisms.

Directory of Open Access Journals (Sweden)

Kristina A Stinson

2006-05-01

Full Text Available The impact of exotic species on native organisms is widely acknowledged, but poorly understood. Very few studies have empirically investigated how invading plants may alter delicate ecological interactions among resident species in the invaded range. We present novel evidence that antifungal phytochemistry of the invasive plant, Alliaria petiolata, a European invader of North American forests, suppresses native plant growth by disrupting mutualistic associations between native canopy tree seedlings and belowground arbuscular mycorrhizal fungi. Our results elucidate an indirect mechanism by which invasive plants can impact native flora, and may help explain how this plant successfully invades relatively undisturbed forest habitat.

Species-Level Differences in Hyperspectral Metrics among Tropical Rainforest Trees as Determined by a Tree-Based Classifier

Directory of Open Access Journals (Sweden)

Dar A. Roberts

2012-06-01

Full Text Available This study explores a method to classify seven tropical rainforest tree species from full-range (400–2,500 nm hyperspectral data acquired at tissue (leaf and bark, pixel and crown scales using laboratory and airborne sensors. Metrics that respond to vegetation chemistry and structure were derived using narrowband indices, derivative- and absorption-based techniques, and spectral mixture analysis. We then used the Random Forests tree-based classifier to discriminate species with minimally-correlated, importance-ranked metrics. At all scales, best overall accuracies were achieved with metrics derived from all four techniques and that targeted chemical and structural properties across the visible to shortwave infrared spectrum (400–2500 nm. For tissue spectra, overall accuracies were 86.8% for leaves, 74.2% for bark, and 84.9% for leaves plus bark. Variation in tissue metrics was best explained by an axis of red absorption related to photosynthetic leaves and an axis distinguishing bark water and other chemical absorption features. Overall accuracies for individual tree crowns were 71.5% for pixel spectra, 70.6% crown-mean spectra, and 87.4% for a pixel-majority technique. At pixel and crown scales, tree structure and phenology at the time of image acquisition were important factors that determined species spectral separability.

Wood Volume Production and Use of 10 Woody Species in Semiarid Zones of Northeastern Mexico

Directory of Open Access Journals (Sweden)

Rahim Foroughbakhch

2012-01-01

Full Text Available A research strategy was established to analyze the structure of timber trees in terms of forest productivity (volume and wood density of 10 species. The native species Acacia farnesiana, Acacia schaffneri, Bumelia celastrina, Cercidium macrun, Condalia hookeri, Ebenopsis ebano, Helietta parvifolia, and Prosopis laevigata and the exotic species Eucalyptus camaldulensis and Leucaena leucocephala were chosen due to their ecological and economic importance to the rural villages of northeastern Mexico. Measurements of different growth parameters and volume of trees were evaluated. The introduced species E. camaldulensis and L. leucocephala showed the best performance in wood volume production per tree and per hectare when compared to the native species. Likewise, among the native species, E. ebano, P. laevigata, C. hookeri, and A. farnesiana tended to show better characteristics in terms of wood volume production in comparison to H. parvifolia, A. schaffneri, C. macrum, and B. celastrina. Results showed a high diversity on the properties studied. The high biomass produced by most of the species considered in this study revealed their great energetic potential when used as wood and firewood or vegetal charcoal.

Arbuscular mycorrhizal fungal diversity and natural enemies promote coexistence of tropical tree species

Science.gov (United States)

Benedicte Bachelot; María Uriarte; Krista L. McGuire; Jill Thompson; Jess Zimmerman

2017-01-01

Negative population feedbacks mediated by natural enemies can promote species coexistence at the community scale through disproportionate mortality of numerically dominant (common) tree species. Simultaneously, associations with arbuscular mycorrhizal fungi (AMF) can result in positive effects on tree populations. Coupling data on seedling foliar damage from herbivores...

Hide and go seek with temperature signals of Northeastern US Tree Species

Science.gov (United States)

Alexander, M. R.; Pederson, N.; Bishop, D. A.; Pearl, J. K.; Anchukaitis, K. J.

2017-12-01

Improving reconstructions of past climate is vital in providing long-term context for regional climate change. There have been only two published reconstructions of past temperatures in the northeastern U.S. (NEUS) since the 1980s, one based on Picea rubens, and one out in 2017 based upon Chamaecyparis thyoides (Atlantic white cedar; AWC). Because increased species diversity generally improves dendrohydroclimatic reconstructions and both Picea rubens and AWC have limitations as paleoproxies due to land-use and air pollution, we conducted a series of tests to ask, "Does species diversity improve reconstructions of temperature history in the northeastern United States?" The first two tests were performed on AWC and then a network of AWC and Picea rubens. Subsequent tests added groups of species or genera from a network of 230 tree-ring chronologies beginning with those having the strongest relation between warming temperatures and increased growth. PC1 of the AWC test represented 40% of the variance and showed a significant positive relation with winter temperature (r = 0.38). As additional species were included, the "winter temperature PC" accounted for less of the overall variance, ranging from 26% of the variance in test 2 to 5% by test 5. AWC is swamped by the hydroclimatic signal that dominates our network. Populations of species such as Fagus grandifolia, Fraxinus nigra, Juniperus virginiana, Liriodendron tulipifera, Pinus rigida, and Pinus strobus from our network loaded strongest with AWC on the winter temperature PC. Including multiple species accounted for almost 20% more variance in the winter temperature record than AWC alone. Although drought is a dominating influence of tree growth in this region, our results suggest that winter temperatures are recorded within NEUS tree rings. Increasing the species diversity of tree proxies has the potential for improving reconstruction of paleotemperatures in regions lacking latitudinal or altitudinal tree lines

Exotic snakes are not always found in exotic places: how poison centres can assist emergency departments

OpenAIRE

Lubich, Carol; Krenzelok, Edward P

2009-01-01

Emergency departments throughout the USA may have some familiarity with the management of envenomation from indigenous snake species such as Crotalinae (rattlesnakes) and Micrurus (coral snakes). However, venomous species may include exotic reptiles whose bites pose substantial treatment challenges due to both a lack of experience and the difficulty in obtaining antivenoms. Two pet cobra envenomation incidents illustrate the challenges that face emergency departments, especially in urban sett...

Exotic snakes are not always found in exotic places: how poison centres can assist emergency departments

OpenAIRE

Lubich, Carol; Krenzelok, Edward P

2007-01-01

Emergency departments throughout the USA may have some familiarity with the management of envenomation from indigenous snake species such as Crotalinae (rattlesnakes) and Micrurus (coral snakes). However, venomous species may include exotic reptiles whose bites pose substantial treatment challenges due to both a lack of experience and the difficulty in obtaining antivenoms. Two pet cobra envenomation incidents illustrate the challenges that face emergency departments, especially in urban sett...

Allometric biomass equations for 12 tree species in coniferous and broadleaved mixed forests, Northeastern China.

Science.gov (United States)

He, Huaijiang; Zhang, Chunyu; Zhao, Xiuhai; Fousseni, Folega; Wang, Jinsong; Dai, Haijun; Yang, Song; Zuo, Qiang

2018-01-01

Understanding forest carbon budget and dynamics for sustainable resource management and ecosystem functions requires quantification of above- and below-ground biomass at individual tree species and stand levels. In this study, a total of 122 trees (9-12 per species) were destructively sampled to determine above- and below-ground biomass of 12 tree species (Acer mandshuricum, Acer mono, Betula platyphylla, Carpinus cordata, Fraxinus mandshurica, Juglans mandshurica, Maackia amurensis, P. koraiensis, Populus ussuriensis, Quercus mongolica, Tilia amurensis and Ulmus japonica) in coniferous and broadleaved mixed forests of Northeastern China, an area of the largest natural forest in the country. Biomass allocation was examined and biomass models were developed using diameter as independent variable for individual tree species and all species combined. The results showed that the largest biomass allocation of all species combined was on stems (57.1%), followed by coarse root (21.3%), branch (18.7%), and foliage (2.9%). The log-transformed model was statistically significant for all biomass components, although predicting power was higher for species-specific models than for all species combined, general biomass models, and higher for stems, roots, above-ground biomass, and total tree biomass than for branch and foliage biomass. These findings supplement the previous studies on this forest type by additional sample trees, species and locations, and support biomass research on forest carbon budget and dynamics by management activities such as thinning and harvesting in the northeastern part of China.

[Effects of tree species on polysaccharides content of epiphytic Dendrobium officinale].

Science.gov (United States)

Guo, Ying-Ying; Zhu, Yan; Si, Jin-Ping; Liu, Jing-Jing; Wu, Cheng-Yong; Li, Hui

2014-11-01

To reveals the effects of tree species on polysaccharides content of epiphytic Dendrobium officinale. The polysaccharides content of D. officinale attached to living tress in wild or stumps in bionic-facility was determined by phenol-sulfuric acid method. There were extremely significant differences of polysaccharides content of D. officinale attached to different tree species, but the differences had no relationship with the form and nutrition of barks. The polysaccharides content of D. officinale mainly affected by the light intensity of environment, so reasonable illumination favored the accumulation of polysaccharides. Various polysaccharides content of D. officinal from different attached trees is due to the difference of light regulation, but not the form and nutrition of barks.

Tree cover and species composition effects on academic performance of primary school students.

Science.gov (United States)

Sivarajah, Sivajanani; Smith, Sandy M; Thomas, Sean C

2018-01-01

Human exposure to green space and vegetation is widely recognized to result in physical and mental health benefits; however, to date, the specific effects of tree cover, diversity, and species composition on student academic performance have not been investigated. We compiled standardized performance scores in Grades 3 and 6 for the collective student body in 387 schools across the Toronto District School Board (TDSB), and examined variation in relation to tree cover, tree diversity, and tree species composition based on comprehensive inventories of trees on school properties combined with aerial-photo-based assessments of tree cover. Analyses accounted for variation due to socioeconomic factors using the learning opportunity index (LOI), a regional composite index of external challenges to learning that incorporates income and other factors, such as students with English as a second language. As expected, LOI had the greatest influence on student academic performance; however, the proportion of tree cover, as distinct from other types of "green space" such as grass, was found to be a significant positive predictor of student performance, accounting for 13% of the variance explained in a statistical model predicting mean student performance assessments. The effects of tree cover and species composition were most pronounced in schools that showed the highest level of external challenges, suggesting the importance of urban forestry investments in these schools.

Acceleration of exotic plant invasion in a forested ecosystem by a generalist herbivore.

Science.gov (United States)

Eschtruth, Anne K; Battles, John J

2009-04-01

The successful invasion of exotic plants is often attributed to the absence of coevolved enemies in the introduced range (i.e., the enemy release hypothesis). Nevertheless, several components of this hypothesis, including the role of generalist herbivores, remain relatively unexplored. We used repeated censuses of exclosures and paired controls to investigate the role of a generalist herbivore, white-tailed deer (Odocoileus virginianus), in the invasion of 3 exotic plant species (Microstegium vimineum, Alliaria petiolata, and Berberis thunbergii) in eastern hemlock (Tsuga canadensis) forests in New Jersey and Pennsylvania (U.S.A.). This work was conducted in 10 eastern hemlock (T. canadensis) forests that spanned gradients in deer density and in the severity of canopy disturbance caused by an introduced insect pest, the hemlock woolly adelgid (Adelges tsugae). We used maximum likelihood estimation and information theoretics to quantify the strength of evidence for alternative models of the influence of deer density and its interaction with the severity of canopy disturbance on exotic plant abundance. Our results were consistent with the enemy release hypothesis in that exotic plants gained a competitive advantage in the presence of generalist herbivores in the introduced range. The abundance of all 3 exotic plants increased significantly more in the control plots than in the paired exclosures. For all species, the inclusion of canopy disturbance parameters resulted in models with substantially greater support than the deer density only models. Our results suggest that white-tailed deer herbivory can accelerate the invasion of exotic plants and that canopy disturbance can interact with herbivory to magnify the impact. In addition, our results provide compelling evidence of nonlinear relationships between deer density and the impact of herbivory on exotic species abundance. These findings highlight the important role of herbivore density in determining impacts on

Climate Responses in Growth and Wood Anatomy of Imoprtant Forest Tree Species in Denmark

DEFF Research Database (Denmark)

Huang, Weiwei

and high temperatures on the development of Danish tree species are scarcely investigated. Through a dendroecological approach this dissertation assessed the growth responses related to increment, xylem anatomy and wood property of eight different important tree species, namely Picea abies (L.) Karst......., Picea sitchensis (Bong.) Carr., Abies alba Mill., Abies grandis (Dougl.) Lindl., Pseudotsuga mensiesii (Mirb.) Franco, Larix kaempferi (Lamb.) Carr., Quercus robur L. and Fagus sylvatica L., to long-term drought and high temperatures, aiming at identifying a species portfolio matching future climate...... intolerant species, mainly due to their low drought tolerance (both species) and susceptibility to high autumn temperature (only P. abies). Overall, this dissertation improves the understanding of how drought and high temperatures have impacted and will influence the growth of tree species in Danish forest...

Tree species composition affects the abundance of rowan (Sorbus aucuparia L.) in urban forests in Finland.

Science.gov (United States)

Hamberg, Leena; Lehvävirta, Susanna; Kotze, D Johan; Heikkinen, Juha

2015-03-15

Recent studies have shown a considerable increase in the abundance of rowan (Sorbus aucuparia) saplings in urban forests in Finland, yet the reasons for this increase are not well understood. Here we investigated whether canopy cover or tree species composition, i.e., the basal areas of different tree species in Norway spruce dominated urban forests, affects the abundances of rowan seedlings, saplings and trees. Altogether 24 urban forest patches were investigated. We sampled the number of rowan and other saplings, and calculated the basal areas of trees. We showed that rowan abundance was affected by tree species composition. The basal area of rowan trees (≥ 5 cm in diameter at breast height, dbh) decreased with increasing basal area of Norway spruce, while the cover of rowan seedlings increased with an increase in Norway spruce basal area. However, a decrease in the abundance of birch (Betula pendula) and an increase in the broad-leaved tree group (Acer platanoides, Alnus glutinosa, Alnus incana, Amelanchier spicata, Prunus padus, Quercus robur, Rhamnus frangula and Salix caprea) coincided with a decreasing number of rowans. Furthermore, rowan saplings were scarce in the vicinity of mature rowan trees. Although it seems that tree species composition has an effect on rowan, the relationship between rowan saplings and mature trees is complex, and therefore we conclude that regulating tree species composition is not an easy way to keep rowan thickets under control in urban forests in Finland. Copyright © 2015 Elsevier Ltd. All rights reserved.

The role of selected tree species in industrial sewage sludge/flotation tailing management.

Science.gov (United States)

Mleczek, Mirosław; Rutkowski, Paweł; Niedzielski, Przemysław; Goliński, Piotr; Gąsecka, Monika; Kozubik, Tomisław; Dąbrowski, Jędrzej; Budzyńska, Sylwia; Pakuła, Jarosław

2016-11-01

The aim of the study was to estimate the ability of ten tree and bush species to tolerate and accumulate Cd, Cu, Pb, Zn, and As species [As(III), As(V), and total organic arsenic] in industrial sewage sludge extremely contaminated with arsenic (almost 27.5 g kg(-1)) in a pot experiment. The premise being that it will then be possible to select the most promising tree/bush species, able to grow in the vicinity of dams where sewage sludge/flotation tailings are used as landfill. Six of the ten tested tree species were able to grow on the sludge. The highest content of total As was observed in Betula pendula roots (30.0 ± 1.3 mg kg(-1) DW), where the dominant As species was the toxic As(V). The highest biomass of Quercus Q1 robur (77.3 § 2.6 g) and Acer platanoides (76.0 § 4.9 g) was observed. A proper planting of selected tree species that are able to thrive on sewage sludge/flotation tailings could be an interesting and promising way to protect dams. By utilizing differences in their root systems and water needs, we will be able to reduce the risk of fatal environmental disasters.

Regenerative Resilience of Tree Species in a Degraded Forest within Mt Kenya Ecosystem

International Nuclear Information System (INIS)

Omenda, T.O; Kariuki, J.G; Kamondo, B.M; Kiamba, J.K

2007-01-01

There is widespread human induced degradation of natural forest in Kenya. The major challenge to this situation is to devise cost effective rehabilitation approaches to reverse this trend. A study was conducted in Nyanza province of Kenya describing the structure and diversity of a disturbed natural forest and understanding the role so various propagules, namely seed, soil seed bank and coppices in post-disturbance recovery. The pre-disturbance forest type was a podo-Cassipourea-Teclea tropical montane forest. Four 350 m long line-plot transects were randomly located within the forest. Tree and stump data were obtained from 20*20 m plots located at 50 m intervals, while sapling, seeding and soil seed bank data were obtained from 5*5 m, 1*1 m and 0.2*0.2*0.5 subplots respectively, nested within the large plot. An 'Index of Species Resilence' that defines their continued was developed based on the tree species ability to coppice and their representation in seedling, sapling and tree stages. The forest condition was highly heterogeneous as determined through spatial distribution of basal area, height and diameter of breast height (dbh) of trees and cut stumps, the latter an indicator of disturbance. The Resilience Index indicated that, out of the 40 tree species found in the forest, only 30% had stable presence while 50% had an unstable presence characterized by in key succession stages-implying low auto-recovery potential. Results indicated that, coppicing had a more critical role in regeneration than previously thought, with 78% of all cut-tree species coppicing while only 27.5% of all the trees species regenerated from seed. The role of soil seed bank in auto-recovery was insignificant in this site. The apparent high coppicing potential presents a new opportunity for managing natural forests

Ecology and Conservation of the Critically Endangered Tree Species Gymnocladus assamicus in Arunachal Pradesh, India

International Nuclear Information System (INIS)

Choudhury, B.I.; Khan, M.L.; Arunachalam, A.; Das, A.K.

2007-01-01

Gymnocladus assamicus is a critically endangered leguminous tree species endemic to Northeast India. Mature pods of the trees yield soap material and are collected by local people for domestic purposes and religious activities. G. assamicus grows on hill slopes and along banks of streams. Male and hermaphrodite flowers are borne by separate individual trees. Altogether 28 mature trees were documented from nine populations. Of these, very few regenerating trees were found. This species regenerates only through seeds. The major constraints to natural regeneration are over harvesting of mature fruits, habitat destruction, grazing, predation of seeds by scatter-hoarding animals, poor percentage of seed germination due to their hard-waxy seed coats, and the lack of seed dispersal. Effective conservation initiatives should emphasize sustainable harvesting of mature pods, awareness among local people, and preservation of surviving individuals of the species. Nonetheless, reintroduction of the species to suitable ecological habitats is also recommended.

New flux based dose-response relationships for ozone for European forest tree species.

Science.gov (United States)

Büker, P; Feng, Z; Uddling, J; Briolat, A; Alonso, R; Braun, S; Elvira, S; Gerosa, G; Karlsson, P E; Le Thiec, D; Marzuoli, R; Mills, G; Oksanen, E; Wieser, G; Wilkinson, M; Emberson, L D

2015-11-01

To derive O3 dose-response relationships (DRR) for five European forest trees species and broadleaf deciduous and needleleaf tree plant functional types (PFTs), phytotoxic O3 doses (PODy) were related to biomass reductions. PODy was calculated using a stomatal flux model with a range of cut-off thresholds (y) indicative of varying detoxification capacities. Linear regression analysis showed that DRR for PFT and individual tree species differed in their robustness. A simplified parameterisation of the flux model was tested and showed that for most non-Mediterranean tree species, this simplified model led to similarly robust DRR as compared to a species- and climate region-specific parameterisation. Experimentally induced soil water stress was not found to substantially reduce PODy, mainly due to the short duration of soil water stress periods. This study validates the stomatal O3 flux concept and represents a step forward in predicting O3 damage to forests in a spatially and temporally varying climate. Crown Copyright © 2015. Published by Elsevier Ltd. All rights reserved.

Phytoextraction of potentially toxic elements by six tree species growing on hazardous mining sludge.

Science.gov (United States)

Mleczek, Mirosław; Goliński, Piotr; Krzesłowska, Magdalena; Gąsecka, Monika; Magdziak, Zuzanna; Rutkowski, Paweł; Budzyńska, Sylwia; Waliszewska, Bogusława; Kozubik, Tomisław; Karolewski, Zbigniew; Niedzielski, Przemysław

2017-10-01

The aim of the study was to compare the phytoextraction abilities of six tree species (Acer platanoides L., Acer pseudoplatanus L., Betula pendula Roth, Quercus robur L., Tilia cordata Miller, Ulmus laevis Pall.), cultivated on mining sludge contaminated with arsenic (As), cadmium (Cd), copper (Cu), lead (Pb), thallium (Tl), and zinc (Zn). All six tree species were able to survive on such an unpromising substrate. However, A. platanoides and T. cordata seedlings grown on the polluted substrate showed significantly lower biomass than control plants (55.5 and 45.6%, respectively). As, Cd, Cu, Pb, and Tl predominantly accumulated in the roots of all the analyzed tree species with the following highest contents: 1616, 268, 2432, 547, and 856 mg kg -1 , respectively. Zn was predominantly localized in shoots with the highest content of 5801 and 5732 mg kg -1 for U. laevis and A. platanoides, respectively. A. platanoides was the most effective in Zn phytoextaction, with a bioconcentration factor (BCF) of 8.99 and a translocation factor (TF) of 1.5. Furthermore, with the exception of A. pseudoplatanus, the analyzed tree species showed a BCF > 1 for Tl, with the highest value for A. platanoides (1.41). However, the TF for this metal was lower than 1 in all the analyzed tree species. A. platanoides showed the highest BCF and a low TF and could, therefore, be a promising species for Tl phytostabilization. In the case of the other analyzed tree species, their potential for effective phytoextraction was markedly lower. Further studies on the use of A. platanoides in phytoremediation would be worth conducting.

Vegetative propagation of twelve fodder tree species indigenous to ...

African Journals Online (AJOL)

Vegetative propagation of twelve fodder tree species indigenous to the Sahel, West Africa. Catherine Ky-Dembele, Jules Bayala, Antoine Kalinganire, Fatoumata Tata Traoré, Bréhima Koné, Alain Olivier ...

Effects of tree species on soil properties in a forest of the Northeastern United States

NARCIS (Netherlands)

Dijkstra, F.A.

2001-01-01

Large differences in soil pH and available Ca in the surface soil exist among tree species growing in a mixed hardwood forest in northwestern Connecticut. The observed association between tree species and specific soil chemical properties within mixed-species stands implies that changes in

Modern tree species composition reflects ancient Maya "forest gardens" in northwest Belize.

Science.gov (United States)

Ross, Nanci J

2011-01-01

Ecology and ethnobotany were integrated to assess the impact of ancient Maya tree-dominated home gardens (i.e., "forest gardens"), which contained a diversity of tree species used for daily household needs, on the modern tree species composition of a Mesoamerican forest. Researchers have argued that the ubiquity of these ancient gardens throughout Mesoamerica led to the dominance of species useful to Maya in the contemporary forest, but this pattern may be localized depending on ancient land use. The tested hypothesis was that species composition would be significantly different between areas of dense ancient residential structures (high density) and areas of little or no ancient settlement (low density). Sixty-three 400-m2 plots (31 high density and 32 low density) were censused around the El Pilar Archaeological Reserve in northwestern Belize. Species composition was significantly different, with higher abundances of commonly utilized "forest garden" species still persisting in high-density forest areas despite centuries of abandonment. Subsequent edaphic analyses only explained 5% of the species composition differences. This research provides data on the long-term impacts of Maya forests gardens for use in development of future conservation models. For Mesoamerican conservation programs to work, we must understand the complex ecological and social interactions within an ecosystem that developed in intimate association with humans.

Methodology to evaluate the insecticide potential of forest tree species

International Nuclear Information System (INIS)

Morales Soto, Leon; Garcia P, Carlos Mario

2000-01-01

The flora diversity of Colombia has an enormous potential in the rational use of its forest resources. Trees with biocidal effects to control pests and diseases need to be investigated. The objective of this research was to develop a methodology with low costs, easy application and quick results. The methodology employed was as follows: selection of tree species based on bibliography, ancestral reports and personal observations. The process was as follows: field collection of plants, preparation of plants extracts and test with Artemia salina Leach to detect biological activity of the extracts using LC50. Bioassays with those extract more promising (LC50 less than 1000 ppm) Determination of active compounds. The methodology was employed with 5 forest tree species: guarea guidonia (L) Sleumer and trichia hirta L. (Meliaceae), Machaerium Moritzianum Benth. (Fabaceae), Swinglea glutinosa Merrill (rutaceae) and Mammea americana L. (Clusiaceae). Using Artemia salina Leach as indicator of biocidal potential, two species were selected as the most promising, those were: Swinglea glutinosa Merril and Machaerium moritzianum Benth. In addition bioassays were made to evaluate fagoinhibition on Atta cephalotes (L.) (Hym: Formicidae) and control of Alconeura. This methodology is recommended for this kind of research

Propagation of Native Tree Species to Restore Subtropical Evergreen Broad-Leaved Forests in SW China

Directory of Open Access Journals (Sweden)

Yang Lu

2016-01-01

Full Text Available Subtropical evergreen broad-leaved forest (EBLF is a widespread vegetation type throughout East Asia that has suffered extensive deforestation and fragmentation. Selection and successful propagation of native tree species are important for improving ecological restoration of these forests. We carried out a series of experiments to study the propagation requirements of indigenous subtropical tree species in Southwest China. Seeds of 21 tree species collected from the natural forest were materials for the experiment. This paper examines the seed germination and seedling growth performance of these species in a nursery environment. Germination percentages ranged from 41% to 96% and were ≥50% for 19 species. The median length of germination time (MLG ranged from 24 days for Padus wilsonii to 144 days for Ilex polyneura. Fifteen species can reach the transplant size (≥15 cm in height within 12 months of seed collection. Nursery-grown seedlings for each species were planted in degraded site. Two years after planting, the seedling survival rate was >50% in 18 species and >80% in 12 species. Based on these results, 17 species were recommended as appropriate species for nursery production in forest restoration projects. Our study contributes additional knowledge regarding the propagation techniques for various native subtropical tree species in nurseries for forest restoration.

The true meaning of 'exotic species' as a model for genetically engineered organisms.

Science.gov (United States)

Regal, P J

1993-03-15

The exotic or non-indigenous species model for deliberately introduced genetically engineered organisms (GEOs) has often been misunderstood or misrepresented. Yet proper comparisons of of ecologically competent GEOs to the patterns of adaptation of introduced species have been highly useful among scientists in attempting to determine how to apply biological theory to specific GEO risk issues, and in attempting to define the probabilities and scale of ecological risks with GEOs. In truth, the model predicts that most projects may be environmentally safe, but a significant minority may be very risky. The model includes a history of institutional follies that also should remind workers of the danger of oversimplifying biological issues, and warn against repeating the sorts of professional misjudgements that have too often been made in introducing organisms to new settings. We once expected that the non-indigenous species model would be refined by more analysis of species eruptions, ecological genetics, and the biology of select GEOs themselves, as outlined. But there has been political resistance to the effective regulation of GEOs, and a bureaucratic tendency to focus research agendas on narrow data collection. Thus there has been too little promotion by responsible agencies of studies to provide the broad conceptual base for truly science-based regulation. In its presently unrefined state, the non-indigenous species comparison would overestimate the risks of GEOs if it were (mis)applied to genetically disrupted, ecologically crippled GEOs, but in some cases of wild-type organisms with novel engineered traits, it could greatly underestimate the risks. Further analysis is urgently needed.

Nuclear spin content and constraints on exotic spin-dependent couplings

International Nuclear Information System (INIS)

Kimball, D F Jackson

2015-01-01

There are numerous recent and ongoing experiments employing a variety of atomic species to search for couplings of atomic spins to exotic fields. In order to meaningfully compare these experimental results, the coupling of the exotic field to the atomic spin must be interpreted in terms of the coupling to electron, proton, and neutron spins. Traditionally, constraints from atomic experiments on exotic couplings to neutron and proton spins have been derived using the single-particle Schmidt model for nuclear spin. In this model, particular atomic species are sensitive to either neutron or proton spin couplings, but not both. More recently, semi-empirical models employing nuclear magnetic moment data have been used to derive new constraints for non-valence nucleons. However, comparison of such semi-empirical models to detailed large-scale nuclear shell model calculations and analysis of known physical effects in nuclei show that existing semi-empirical models cannot reliably be used to predict the spin polarization of non-valence nucleons. The results of our re-analysis of nuclear spin content are applied to searches for exotic long-range monopole–dipole and dipole–dipole couplings of nuclei leading to significant revisions of some published constraints. (paper)

Diversification rates and species richness across the Tree of Life.

Science.gov (United States)

Scholl, Joshua P; Wiens, John J

2016-09-14

Species richness varies dramatically among clades across the Tree of Life, by over a million-fold in some cases (e.g. placozoans versus arthropods). Two major explanations for differences in richness among clades are the clade-age hypothesis (i.e. species-rich clades are older) and the diversification-rate hypothesis (i.e. species-rich clades diversify more rapidly, where diversification rate is the net balance of speciation and extinction over time). Here, we examine patterns of variation in diversification rates across the Tree of Life. We address how rates vary across higher taxa, whether rates within higher taxa are related to the subclades within them, and how diversification rates of clades are related to their species richness. We find substantial variation in diversification rates, with rates in plants nearly twice as high as in animals, and rates in some eukaryotes approximately 10-fold faster than prokaryotes. Rates for each kingdom-level clade are then significantly related to the subclades within them. Although caution is needed when interpreting relationships between diversification rates and richness, a positive relationship between the two is not inevitable. We find that variation in diversification rates seems to explain most variation in richness among clades across the Tree of Life, in contrast to the conclusions of previous studies. © 2016 The Author(s).

Aliens in Paradise. Boat density and exotic coastal mollusks in Moorea Island (French Polynesia).

Science.gov (United States)

Ardura, Alba; Planes, Serge; Garcia-Vazquez, Eva

2015-12-01

Pacific islands are particularly vulnerable to the effects of invasive species. After habitat destruction or modification, invasive species are responsible for more biological extinctions than any other cause. Further, the rate of extinction of native species has been higher on islands than anywhere else in the world. Invasive species have also degraded native ecosystems. In order to detect exotic intertidal mollusk species, an extensive sampling around Moorea Island, a more or less unspoiled island surrounded by a rich coral reef habitat, has been developed considering that sampled points have different characteristics in wave exposure, algae coverage, type of substrate, distance to ports, distance to freshwater, distance sewage and boat traffic. Samples were DNA barcoded for unequivocal species assignation. The presence of five NIS among 26 species seems an important signal of introduction of alien biota in Moorea Island coast. However they were represented by a total of 38 individuals among 1487 mollusks (2.55%). While the distance to relatively big ports influenced directly species richness, the intensity of maritime traffic measured as boat density near sampling points was significantly associated with the frequency of exotic species. Other environmental factors did not show significant correlation with the frequency of exotics, suggesting that in an environment without big discontinuities, with little habitat modification, local boat traffic is the most influential factor in the spread of exotic species. This could be mitigated relatively easily by reducing boat density in local zones of ecological interest. Copyright © 2015 Elsevier Ltd. All rights reserved.

Performance of Asian longhorned beetle among tree species

Science.gov (United States)

Kelli Hoover; Scott Ludwig; James Sellmer; Deborah McCullough; Laura Lazarus

2003-01-01

Two procedures were evaluated for assessing susceptibility of a variety of tree species to Anoplophora glabripennis. In the first procedure, adult beetles were caged with a section of sugar maple, northern red oak, white oak, honeylocust, eastern cottonwood, sycamore or tulip poplar wood and allowed to oviposit.

Climatic extremes improve predictions of spatial patterns of tree species

Science.gov (United States)

Zimmermann, N.E.; Yoccoz, N.G.; Edwards, T.C.; Meier, E.S.; Thuiller, W.; Guisan, Antoine; Schmatz, D.R.; Pearman, P.B.

2009-01-01

Understanding niche evolution, dynamics, and the response of species to climate change requires knowledge of the determinants of the environmental niche and species range limits. Mean values of climatic variables are often used in such analyses. In contrast, the increasing frequency of climate extremes suggests the importance of understanding their additional influence on range limits. Here, we assess how measures representing climate extremes (i.e., interannual variability in climate parameters) explain and predict spatial patterns of 11 tree species in Switzerland. We find clear, although comparably small, improvement (+20% in adjusted D2, +8% and +3% in cross-validated True Skill Statistic and area under the receiver operating characteristics curve values) in models that use measures of extremes in addition to means. The primary effect of including information on climate extremes is a correction of local overprediction and underprediction. Our results demonstrate that measures of climate extremes are important for understanding the climatic limits of tree species and assessing species niche characteristics. The inclusion of climate variability likely will improve models of species range limits under future conditions, where changes in mean climate and increased variability are expected.

Water and nitrogen dynamics in rotational woodlots of five tree species in western Tanzania

NARCIS (Netherlands)

Nyadzi, G.I.; Janssen, B.H.; Otsyina, R.M.; Booltink, H.W.G.; Ong, C.K.; Oenema, O.

2003-01-01

The objective of this study was to compare the effects of woodlots of five tree species, continuous maize (Zea mays L.) and natural fallow on soil water and nitrogen dynamics in western Tanzania. The tree species evaluated were Acacia crassicarpa (A. Cunn. ex Benth.), Acacia julifera ( Berth.),

Leaf anatomical traits of non-arboreal savanna species along a gradient of tree encroachment

Directory of Open Access Journals (Sweden)

Luiz Felipe Souza Pinheiro

2017-10-01

Full Text Available ABSTRACT In the Brazilian savanna (Cerrado of Brazil, fire suppression has transformed typical savanna formations (TS into forested savanna (FS due to the phenomenon of encroachment. Under encroachment, non-arboreal plants begin to receive less light due to greater tree density and canopy closure. Here we aim to evaluate if leaf anatomical traits of non-arboreal species differ according to the degree of tree encroachment at the Assis Ecological Station - São Paulo, Brazil. To this end, we evaluated leaf tissue thickness and specific leaf area (SLA in representative non-arboreal species occurring along a gradient of tree encroachment. Leaves of TS species showed a trend towards xeromorphism, with traits reported to facilitate survival under high luminosity, such as thick leaves, thick epidermis and mesophyll, and low SLA. In contrast, FS species exhibited mesomorphic leaves, with thin mesophyll and high SLA, which are able to capture diffuse light in denser environments. Thus, non-arboreal understory species with mesomorphic leaf traits should be favored in environments with denser vegetation in contrast to typical savanna species. The results suggest that typical non-arboreal savanna species would not survive under tree encroachment due to the low competitiveness of their leaf anatomical strategies in shady environments.

Reliance on deep soil water in the tree species Argania spinosa.

Science.gov (United States)

Zunzunegui, M; Boutaleb, S; Díaz Barradas, M C; Esquivias, M P; Valera, J; Jáuregui, J; Tagma, T; Ain-Lhout, F

2017-12-07

In South-western Morocco, water scarcity and high temperature are the main factors determining species survival. Argania spinosa (L.) Skeels is a tree species, endemic to Morocco, which is suffering from ongoing habitat shrinkage. Argan trees play essential local ecological and economic roles: protecting soils from erosion, shading different types of crops, helping maintain soil fertility and, even more importantly, its seeds are used by the local population for oil production, with valuable nutritional, medicinal and cosmetic purposes. The main objective of this study was to identify the sources of water used by this species and to assess the effect of water availability on the photosynthetic rate and stem water potential in two populations: one growing on the coast and a second one 10 km inland. Stem water potential, photosynthetic rate and xylem water isotopic composition (δ18O) were seasonally monitored during 2 years. Trees from both populations showed a similar strategy in the use of the available water sources, which was strongly dependent on deep soil water throughout the year. Nevertheless, during the wet season or under low precipitation a more complex water uptake pattern was found with a mixture of water sources, including precipitation and soil at different depths. No evidence was found of the use of either groundwater or atmospheric water in this species. Despite the similar water-use strategy, the results indicate that Argania trees from the inland population explored deeper layers than coastal ones as suggested by more depleted δ18O values recorded in the inland trees and better photosynthetic performance, hence suggesting that the coastal population of A. spinosa could be subjected to higher stress. © The Author 2017. Published by Oxford University Press. All rights reserved. For Permissions, please email: journals.permissions@oup.com.

Neighborhood diversity of large trees shows independent species patterns in a mixed dipterocarp forest in Sri Lanka.

Science.gov (United States)

Punchi-Manage, Ruwan; Wiegand, Thorsten; Wiegand, Kerstin; Getzin, Stephan; Huth, Andreas; Gunatilleke, C V Savitri; Gunatilleke, I A U Nimal

2015-07-01

Interactions among neighboring individuals influence plant performance and should create spatial patterns in local community structure. In order to assess the role of large trees in generating spatial patterns in local species richness, we used the individual species-area relationship (ISAR) to evaluate the species richness of trees of different size classes (and dead trees) in circular neighborhoods with varying radius around large trees of different focal species. To reveal signals of species interactions, we compared the ISAR function of the individuals of focal species with that of randomly selected nearby locations. We expected that large trees should strongly affect the community structure of smaller trees in their neighborhood, but that these effects should fade away with increasing size class. Unexpectedly, we found that only few focal species showed signals of species interactions with trees of the different size classes and that this was less likely for less abundant focal species. However, the few and relatively weak departures from independence were consistent with expectations of the effect of competition for space and the dispersal syndrome on spatial patterns. A noisy signal of competition for space found for large trees built up gradually with increasing life stage; it was not yet present for large saplings but detectable for intermediates. Additionally, focal species with animal-dispersed seeds showed higher species richness in their neighborhood than those with gravity- and gyration-dispersed seeds. Our analysis across the entire ontogeny from recruits to large trees supports the hypothesis that stochastic effects dilute deterministic species interactions in highly diverse communities. Stochastic dilution is a consequence of the stochastic geometry of biodiversity in species-rich communities where the identities of the nearest neighbors of a given plant are largely unpredictable. While the outcome of local species interactions is governed for each

Slope variation and population structure of tree species from different ecological groups in South Brazil.

Science.gov (United States)

Bianchini, Edmilson; Garcia, Cristina C; Pimenta, José A; Torezan, José M D

2010-09-01

Size structure and spatial arrangement of 13 abundant tree species were determined in a riparian forest fragment in Paraná State, South Brazil (23°16'S and 51°01'W). The studied species were Aspidosperma polyneuron Müll. Arg., Astronium graveolens Jacq. and Gallesia integrifolia (Spreng) Harms (emergent species); Alseis floribunda Schott, Ruprechtia laxiflora Meisn. and Bougainvillea spectabilis Willd. (shade-intolerant canopy species); Machaerium paraguariense Hassl, Myroxylum peruiferum L. and Chrysophyllum gonocarpum (Mart. & Eichler ex Miq.) Engl. (shade-tolerant canopy species); Sorocea bonplandii (Baill.) Bürger, Trichilia casaretti C. Dc, Trichilia catigua A. Juss. and Actinostemon concolor (Spreng.) Müll. Arg. (understory small trees species). Height and diameter structures and basal area of species were analyzed. Spatial patterns and slope correlation were analyzed by Moran's / spatial autocorrelation coefficient and partial Mantel test, respectively. The emergent and small understory species showed the highest and the lowest variations in height, diameter and basal area. Size distribution differed among emergent species and also among canopy shade-intolerant species. The spatial pattern ranged among species in all groups, except in understory small tree species. The slope was correlated with spatial pattern for A. polyneuron, A. graveolens, A. floribunda, R. laxiflora, M. peruiferum and T. casaretti. The results indicated that most species occurred in specific places, suggesting that niche differentiation can be an important factor in structuring the tree community.

Predicting climate change extirpation risk for central and southern Appalachian forest tree species

Science.gov (United States)

Kevin M. Potter; William W. Hargrove; Frank H. Koch

2010-01-01

Climate change will likely pose a severe threat to the viability of certain forest tree species, which will be forced either to adapt to new conditions or to shift to more favorable environments if they are to survive. Several forest tree species of the central and southern Appalachians may be at particular risk, since they occur in limited high-elevation ranges and/or...

Evaluation for Multi Purpose Free Species for Inter Cropping with Maize

International Nuclear Information System (INIS)

Kimotho, L.M

2002-01-01

The continued increase in Kenya's population has forced people to move into the dry lands and hence increasing demand for food and tree products in these areas. This has forced farmers to clear the existing natural forests to pave way for agricultural activities. In order to address this problem an integrated approach of planting both trees and crops on farm has been adopted. A trial was established to compare the growth performance of some local and exotic timber tree species as well as examine their effect on maize (Zea mays) crop yield. the tree treatments included Acacia polyacantha, caesalpinia velutina, Grevillae robusta, melia azaderach, senna spectabilis and senna siamea, planted at 5m x 5m spacing, in a Randomized Complete Block Design with three (3) replicates. Maize crop (Dry Land Hybrid 1 -DH1) was used as inter-crop during November-January seasons. The maize was planted at a spacing of 90 cm by 40 cm. There was a control with no trees. Growth of the trees was based on increase in both height and girth while whilst the crop yield was asses d by estimating average plot yield under each species. Results indicated that, different tree species affected the maize grain yield differently: i.e. there was no tre effect on maize yield in the earlier stages but as the trees increased in age and hence size some species caused reduction in the maize grain yields while others did not cause any reduction as yet. However, depending on the individual needs various decisions could be made on whether to compromise the crop yields, which are minimal in order to attain some timber products in addition to food. The trial is continuing in order to establish how long each tree species would permit a maize crop

FOREST SPECIES EVALUATION IN THE FOREST REGION IN RORAIMA STATE

Directory of Open Access Journals (Sweden)

Helio Tonini

2006-03-01

Full Text Available This study was carried out to evaluate 19 native and exotic species and to identify potential species for plantation inhomogeneous stands and in agroforestry systems in forest ecosystem in Roraima State. The species were planted from 1997 to 2000.When the objective was sawn wood production the spacing was 4 x 3 m and when the objective was energy and pulp production thespacing was 3 x 2 m. The samples consisted of 9 lines of 9 plants, totaling 81 plants, coming down to 49 useful trees. In each useful treewere measured the DBH (diameter at 1.30 m and total height. The merchantable volume per hectare was obtained with themerchantable form factor determination, through the scaling of two medium trees using the Smalian method. Each species, was alsoevaluated in relation to survival, bole quality, phytossanitary aspects and wind damages.The data analysis indicated as promisingspecies for use in energy, Eucalyptus urograndis; Schizolobium amazonicum as low or medium wood density species for use inveneer production and Bertholettia excelsa as medium to high density for use in sawn timber.

The Effect of Host-Plant Phylogenetic Isolation on Species Richness, Composition and Specialization of Insect Herbivores: A Comparison between Native and Exotic Hosts.

Directory of Open Access Journals (Sweden)

Julio Miguel Grandez-Rios

Full Text Available Understanding the drivers of plant-insect interactions is still a key issue in terrestrial ecology. Here, we used 30 well-defined plant-herbivore assemblages to assess the effects of host plant phylogenetic isolation and origin (native vs. exotic on the species richness, composition and specialization of the insect herbivore fauna on co-occurring plant species. We also tested for differences in such effects between assemblages composed exclusively of exophagous and endophagous herbivores. We found a consistent negative effect of the phylogenetic isolation of host plants on the richness, similarity and specialization of their insect herbivore faunas. Notably, except for Jaccard dissimilarity, the effect of phylogenetic isolation on the insect herbivore faunas did not vary between native and exotic plants. Our findings show that the phylogenetic isolation of host plants is a key factor that influences the richness, composition and specialization of their local herbivore faunas, regardless of the host plant origin.

Chemical investigation on wood tree species in a temperate forest, east-northern Romania

Directory of Open Access Journals (Sweden)

Teaca, C. A.

2007-02-01

Full Text Available A quantitative evaluation of wood chemical components for some tree species in a forest area from east-northern Romania is presented here, through a comparative study from 1964 to 2000. Investigation upon the wood tree-rings in a Quercus robur L. tree species, as a dominant species, as regards its chemical composition and structure of the natural polymer constituents - cellulose and lignin - was also performed through chemical methods to separate the main wood components, FT-IR spectroscopy, and thermogravimetry. Having in view the impact of climate and external factors (such as pollutant depositions, some possible correlations between wood chemical composition and its further use can be made. The FT-IR spectra give evidence of differences in the frequency domains of 3400-2900 cm-1 and 1730-1640 cm-1, due to some interactions between the chemical groups (OH, C=O. The crystallinity index of cellulose presents variations in the oak wood tree-rings. Thermogravimetry analyses show different behaviour of cellulose at thermal decomposition, as a function of radial growth and tree’s height. A preliminary chemical investigation of oak wood sawdust shows a relatively high content of mineral elements (ash, compared with a previous study performed in 1964, fact that may indicate an intense drying process of the oak tree, a general phenomenon present in European forests for this species.

[Effects of waterlogging on the growth and energy-metabolic enzyme activities of different tree species].

Science.gov (United States)

Wang, Gui-Bin; Cao, Fu-Liang; Zhang, Xiao-Yan; Zhang, Wang-Xiang

2010-03-01

Aimed to understand the waterlogging tolerance and adaptation mechanisms of different tree species, a simulated field experiment was conducted to study the growth and energy-metabolic enzyme activities of one-year-old seedlings of Taxodium distichum, Carya illinoensis, and Sapium sebiferum. Three treatments were installed, i. e., CK, waterlogging, and flooding, with the treatment duration being 60 days. Under waterlogging and flooding, the relative growth of test tree species was in the order of T. distichum > C. illinoensis > S. sebiferum, indicating that T. distichum had the strongest tolerance against waterlogging and flooding, while S. sebiferum had the weakest one. Also under waterlogging and flooding, the root/crown ratio of the three tree species increased significantly, suggesting that more photosynthates were allocated in roots, and the lactate dehydrogenase (LDH) and alcohol dehydrogenase (ADH) activities of the tree species also had a significant increase. Among the test tree species, T. distichum had the lowest increment of LDH and ADH activities under waterlogging and flooding, but the increment could maintain at a higher level in the treatment duration, while for C. illinoensis and S. sebiferum, the increment was larger during the initial and medium period, but declined rapidly during the later period of treatment. The malate dehydrogenase (MDH), phosphohexose (HPI), and glucose-6-phosphate dehydrogenase (G6PDH) -6-phosphogluconate dehydrogenase (6PGDH) activities of the tree species under waterlogging and flooding had a significant decrease, and the decrement was the largest for T. distichum, being 35.6% for MDH, 21.0% for HPI, and 22.7% for G6PDH - 6PGDH under flooding. It was suggested that under waterlogging and flooding, the tree species with strong waterlogging tolerance had a higher ability to maintain energy-metabolic balance, and thus, its growth could be maintained at a certain level.

Contrasting effects of land use intensity and exotic host plants on the specialization of interactions in plant-herbivore networks.

Science.gov (United States)

de Araújo, Walter Santos; Vieira, Marcos Costa; Lewinsohn, Thomas M; Almeida-Neto, Mário

2015-01-01

Human land use tends to decrease the diversity of native plant species and facilitate the invasion and establishment of exotic ones. Such changes in land use and plant community composition usually have negative impacts on the assemblages of native herbivorous insects. Highly specialized herbivores are expected to be especially sensitive to land use intensification and the presence of exotic plant species because they are neither capable of consuming alternative plant species of the native flora nor exotic plant species. Therefore, higher levels of land use intensity might reduce the proportion of highly specialized herbivores, which ultimately would lead to changes in the specialization of interactions in plant-herbivore networks. This study investigates the community-wide effects of land use intensity on the degree of specialization of 72 plant-herbivore networks, including effects mediated by the increase in the proportion of exotic plant species. Contrary to our expectation, the net effect of land use intensity on network specialization was positive. However, this positive effect of land use intensity was partially canceled by an opposite effect of the proportion of exotic plant species on network specialization. When we analyzed networks composed exclusively of endophagous herbivores separately from those composed exclusively of exophagous herbivores, we found that only endophages showed a consistent change in network specialization at higher land use levels. Altogether, these results indicate that land use intensity is an important ecological driver of network specialization, by way of reducing the local host range of herbivore guilds with highly specialized feeding habits. However, because the effect of land use intensity is offset by an opposite effect owing to the proportion of exotic host species, the net effect of land use in a given herbivore assemblage will likely depend on the extent of the replacement of native host species with exotic ones.

Ecophysiological evaluation of tree species for biomonitoring of air quality and identification of air pollution-tolerant species.

Science.gov (United States)

Sen, Abhishek; Khan, Indrani; Kundu, Debajyoti; Das, Kousik; Datta, Jayanta Kumar

2017-06-01

Identification of tree species that can biologically monitor air pollution and can endure air pollution is very much important for a sustainable green belt development around any polluted place. To ascertain the species, ten tree species were selected on the basis of some previous study from the campus of the University of Burdwan and were studied in the pre-monsoon and post-monsoon seasons. The study has been designed to investigate biochemical and physiological activities of selected tree species as the campus is presently exposed to primary air pollutants and their impacts on plant community were observed through the changes in several physical and biochemical constituents of plant leaves. As the plant species continuously exchange different gaseous pollutants in and out of the foliar system and are very sensitive to gaseous pollutants, they serve as bioindicators. Due to air pollution, foliar surface undergoes different structural and functional changes. In the selected plant species, it was observed that the concentration of primary air pollutants, proline content, pH, relative water holding capacity, photosynthetic rate, and respiration rate were higher in the pre-monsoon than the post-monsoon season, whereas the total chlorophyll, ascorbic acid, sugar, and conductivity were higher in the post-monsoon season. From the entire study, it was observed that the concentration of sulfur oxide (SO x ), nitrogen oxide (NO x ), and suspended particulate matter (SPM) all are reduced in the post-monsoon season than the pre-monsoon season. In the pre-monsoon season, SO x , NO x , and SPM do not have any significant correlation with biochemical as well as physiological parameters. SPM shows a negative relationship with chlorophyll 'a' (r = -0.288), chlorophyll 'b' (r = -0.267), and total chlorophyll (r = -0.238). Similarly, chlorophyll a, chlorophyll b, and the total chlorophyll show negative relations with SO x and NO x (p tree species according to their air

Accounting for sampling patterns reverses the relative importance of trade and climate for the global sharing of exotic plants

Science.gov (United States)

Sofaer, Helen R.; Jarnevich, Catherine S.

2017-01-01

AimThe distributions of exotic species reflect patterns of human-mediated dispersal, species climatic tolerances and a suite of other biotic and abiotic factors. The relative importance of each of these factors will shape how the spread of exotic species is affected by ongoing economic globalization and climate change. However, patterns of trade may be correlated with variation in scientific sampling effort globally, potentially confounding studies that do not account for sampling patterns.LocationGlobal.Time periodMuseum records, generally from the 1800s up to 2015.Major taxa studiedPlant species exotic to the United States.MethodsWe used data from the Global Biodiversity Information Facility (GBIF) to summarize the number of plant species with exotic occurrences in the United States that also occur in each other country world-wide. We assessed the relative importance of trade and climatic similarity for explaining variation in the number of shared species while evaluating several methods to account for variation in sampling effort among countries.ResultsAccounting for variation in sampling effort reversed the relative importance of trade and climate for explaining numbers of shared species. Trade was strongly correlated with numbers of shared U.S. exotic plants between the United States and other countries before, but not after, accounting for sampling variation among countries. Conversely, accounting for sampling effort strengthened the relationship between climatic similarity and species sharing. Using the number of records as a measure of sampling effort provided a straightforward approach for the analysis of occurrence data, whereas species richness estimators and rarefaction were less effective at removing sampling bias.Main conclusionsOur work provides support for broad-scale climatic limitation on the distributions of exotic species, illustrates the need to account for variation in sampling effort in large biodiversity databases, and highlights the

Ecological characterization of two species of exotic fish, pumpkinseed sunfish (Lepomis gibbosus and largemouth bass (Micropterus salmoides in the international Minho river

Directory of Open Access Journals (Sweden)

Ana Cristina Lages

2015-11-01

Full Text Available The introduction of exotic species is considered the main cause for the decline of native species. The largemouth bass (Micropterus salmoides and pumpkinseed sunfish (Lepomis gibbosus are two native species from North America, introduced in Portugal to enhance sport fishing. However, their diet and great adaptability made them considered predatory and harmful. In order to understand the ecological impact of M. salmoides and L. gibbosus in the international section of the Minho River, three sampling sites were selected: two in Vila Nova de Cerveira and one in Lapela, at distance of the mouth of the river of 17 and 45 Km, respectively. The fish were gathered using fyke nets and trammel nets, electric fishing and fishing rod, with performed samplings since July 2014 until October 2015. For all fish caught the biometric data (weight, total and fork length, gonad and liver weight, sex, stomach contents analysis were registered as well as collection of otoliths and scales for age reading. Both species feed on small macroinvertebrates specially the juveniles while adults of largemouth bass and pumpkinseed sunfish prefer eat fish and gastropods, respectively. Because L. gibbosus is a recent introduction in the Minho river estuary its abundance increased a lot in the last two years and it was possible verify the increase of the fish population average length. With this work it is intended to evaluate the impact in the Minho River estuary of both exotic species studying the population structure, trophic webs and reproduction.

Greater soil carbon accumulation in deeper soils in native- than in exotic-dominated grassland plantings in the southern Plains

Science.gov (United States)

Wilsey, B. J.; Xu, X.; Polley, H. W.; Hofmockel, K. S.

2017-12-01

Global change includes invasion by non-native plant species, and invasion may affect carbon cycling and storage. We tested predictions in central Texas in an experiment that compares mixtures of all exotic or all native species under two summer irrigation treatments (128 or 0 mm) that varies the amount of summer drought stress. At the end of the eighth growing season after establishment, soils were sampled in 10 cm increments to 100 cm depth to determine if soil C differed among treatments, and if treatments differentially affected soil C in deeper soils. Soil C content was significantly (5%) higher under native plantings than under exotic species plantings (P plantings increased with depth, and native plantings had higher soil C in deeper soil layers than in surface layers (native-exotic x depth, P plantings had decreasing soil C with depth. Soil C:N ratio and δ13C/12C were also significantly affected by native-exotic status, with soils in exotic plots having a significantly greater C4 contribution than native soils. Soil C was unaffected by summer irrigation treatments. Our results suggest that a significant amount of carbon could be sequestered by replacing exotic plant species with native species in the southern Plains, and that more work should be conducted at deeper soil depths. If we had restricted our analyses to surface soil layers (e.g. top 30 cm), we would have failed to detect depth differences between natives and exotics.

[Research on identification of species of fruit trees by spectral analysis].

Science.gov (United States)

Xing, Dong-Xing; Chang, Qing-Rui

2009-07-01

Using the spectral reflectance data (R2) of canopies, the present paper identifies seven species of fruit trees bearing fruit in the fruit mature period. Firstly, it compares the fruit tree species identification capability of six kinds of satellite sensors and four kinds of vegetation index through re-sampling the spectral data with six kinds of pre-defined filter function and the related data processing of calculating vegetation indexes. Then, it structures a BP neural network model for identifying seven species of fruit trees on the basis of choosing the best transformation of R(lambda) and optimizing the model parameters. The main conclusions are: (1) the order of the identification capability of the six kinds of satellite sensors from strong to weak is: MODIS, ASTER, ETM+, HRG, QUICKBIRD and IKONOS; (2) among the four kinds of vegetation indexes, the identification capability of RVI is the most powerful, the next is NDVI, while the identification capability of SAVI or DVI is relatively weak; (3) The identification capability of RVI and NDVI calculated with the reflectance of near-infrared and red channels of ETM+ or MODIS sensor is relatively powerful; (4) Among R(lambda) and its 22 kinds of transformation data, d1 [log(1/R(lambda))](derivative gap is set 9 nm) is the best transformation for structuring BP neural network model; (5) The paper structures a 3-layer BP neural network model for identifying seven species of fruit trees using the best transformation of R(lambda) which is d1 [log(1/R(lambda))](derivative gap is set 9 nm).

Fruit availability, frugivore satiation and seed removal in 2 primate-dispersed tree species.

Science.gov (United States)

Ratiarison, Sandra; Forget, Pierre-Michel

2011-09-01

During a mast-fruiting event we investigated spatial variability in fruit availability, consumption, and seed removal at two sympatric tree species, Manilkara bidentata and M. huberi (Sapotaceae) at Nouragues Natural Reserve, French Guiana. We addressed the question of how Manilkara density and fruits at the community level might be major causes of variability in feeding assemblages between tree species. We thus explored how the frugivore assemblages differed between forest patches with contrasting relative Manilkara density and fruiting context. During the daytime, Alouatta seniculus was more often observed in M. huberi crowns at Petit Plateau (PP) with the greatest density of Manilkara spp. and the lowest fruit diversity and availability, whereas Cebus apella and Saguinus midas were more often observed in M. bidentata crowns at both Grand Plateau (GP), with a lowest density of M. bidentata and overall greater fruit supply, and PP. Overall, nearly 53% and 15% of the M. bidentata seed crop at GP and PP, respectively, and about 47% of the M. huberi seed crop were removed, otherwise either spit out or defecated beneath trees, or dropped in fruits. Small-bodied primates concentrated fallen seeds beneath parent trees while large-bodied primate species removed and dispersed more seeds away from parents. However, among the latter, satiated A. seniculus wasted seeds under conspecific trees at PP. Variations in feeding assemblages, seed removal rates and fates possibly reflected interactions with extra-generic fruit species at the community level, according to feeding choice, habitat preferences and ranging patterns of primate species. © 2011 ISZS, Blackwell Publishing and IOZ/CAS.

Intraspecific Variation in Armillaria Species from Shrubs and Trees in Northwestern Spain

Directory of Open Access Journals (Sweden)

O. Aguín

2004-08-01

Full Text Available Until recently, the identification of Armillaria species relied upon morphological characteristics and mating tests, but now molecular techniques based on polymorphisms in the IGS region of the fungal rDNA are more commonly used, since these are more rapid and reliable. Differences found in RFLP patterns identifying Armillaria species have suggested the existence of intraspecific variation. In this work, 185 Armillaria isolates from different plant species (including fruit trees, broadleaf and coniferous trees, ornamental shrubs, kiwifruit and grapevine affected by white root rot were analyzed by RFLP-PCR, in order to study intraspecific variation in Armillaria and the relationship with the plant host. Armillaria mellea was found in the majority of samples (71%, and was the most frequent Armillaria species in symptomatic ornamental shrubs, kiwifruit, grapevine, fruit trees and broadleaf trees. In conifers however white root rot was generally caused by Armillaria ostoyae. Armillaria gallica was identified, although with low incidence, in ornamental, coniferous, broadleaf and fruit hosts. Intraspecies variation was recorded only in A. mellea, for which RFLP patterns mel 1 and mel 2 were found. Most plants infected with A. mellea showed the mel 2 pattern. Further research is needed to study whether Armillaria RFLP patterns are specific to certain plant hosts, and whether intraspecific variation is related to differences in pathogenicity.

The trait contribution to wood decomposition rates of 15 Neotropical tree species.

Science.gov (United States)

van Geffen, Koert G; Poorter, Lourens; Sass-Klaassen, Ute; van Logtestijn, Richard S P; Cornelissen, Johannes H C

2010-12-01

The decomposition of dead wood is a critical uncertainty in models of the global carbon cycle. Despite this, relatively few studies have focused on dead wood decomposition, with a strong bias to higher latitudes. Especially the effect of interspecific variation in species traits on differences in wood decomposition rates remains unknown. In order to fill these gaps, we applied a novel method to study long-term wood decomposition of 15 tree species in a Bolivian semi-evergreen tropical moist forest. We hypothesized that interspecific differences in species traits are important drivers of variation in wood decomposition rates. Wood decomposition rates (fractional mass loss) varied between 0.01 and 0.31 yr(-1). We measured 10 different chemical, anatomical, and morphological traits for all species. The species' average traits were useful predictors of wood decomposition rates, particularly the average diameter (dbh) of the tree species (R2 = 0.41). Lignin concentration further increased the proportion of explained inter-specific variation in wood decomposition (both negative relations, cumulative R2 = 0.55), although it did not significantly explain variation in wood decomposition rates if considered alone. When dbh values of the actual dead trees sampled for decomposition rate determination were used as a predictor variable, the final model (including dead tree dbh and lignin concentration) explained even more variation in wood decomposition rates (R2 = 0.71), underlining the importance of dbh in wood decomposition. Other traits, including wood density, wood anatomical traits, macronutrient concentrations, and the amount of phenolic extractives could not significantly explain the variation in wood decomposition rates. The surprising results of this multi-species study, in which for the first time a large set of traits is explicitly linked to wood decomposition rates, merits further testing in other forest ecosystems.

Herbivore preference for native vs. exotic plants: generalist herbivores from multiple continents prefer exotic plants that are evolutionarily naïve.

Directory of Open Access Journals (Sweden)

Wendy E Morrison

2011-03-01

Full Text Available Enemy release and biotic resistance are competing, but not mutually exclusive, hypotheses addressing the success or failure of non-native plants entering a new region. Enemy release predicts that exotic plants become invasive by escaping their co-adapted herbivores and by being unrecognized or unpalatable to native herbivores that have not been selected to consume them. In contrast, biotic resistance predicts that native generalist herbivores will suppress exotic plants that will not have been selected to deter these herbivores. We tested these hypotheses using five generalist herbivores from North or South America and nine confamilial pairs of native and exotic aquatic plants. Four of five herbivores showed 2.4-17.3 fold preferences for exotic over native plants. Three species of South American apple snails (Pomacea sp. preferred North American over South American macrophytes, while a North American crayfish Procambarus spiculifer preferred South American, Asian, and Australian macrophytes over North American relatives. Apple snails have their center of diversity in South America, but a single species (Pomacea paludosa occurs in North America. This species, with a South American lineage but a North American distribution, did not differentiate between South American and North American plants. Its preferences correlated with preferences of its South American relatives rather than with preferences of the North American crayfish, consistent with evolutionary inertia due to its South American lineage. Tests of plant traits indicated that the crayfish responded primarily to plant structure, the apple snails primarily to plant chemistry, and that plant protein concentration played no detectable role. Generalist herbivores preferred non-native plants, suggesting that intact guilds of native, generalist herbivores may provide biotic resistance to plant invasions. Past invasions may have been facilitated by removal of native herbivores, introduction of

Trophic niche partitioning between two native and two exotic carnivores in SW Portugal

Directory of Open Access Journals (Sweden)

M. J. Santos

2007-05-01

Full Text Available The introduction of exotic species is one of the most pervasive consequences of the increased human mobility. The most known negative effects are the decrease or extinction of natives. The common-genet, Genetta genetta, and the Egyptian mongoose, Herpestes ichneumon, were introduced in the Iberian Peninsula in the 15th and 19th centuries, respectively. The competitive exclusion principle defines that two ecologically similar species cannot coexist. Thus, some degree of partitioning has to occur in species realized niche, which can occur at the trophic level. To test this hypothesis of partitioning we compared the diet of these two exotic species with that of two native species (stone marten, Martes foina, and red fox, Vulpes vulpes. The results show a high degree of overlap (>45% between the diets of species similar in their feeding strategies (arboreal and ground feeding. Nonetheless, at the finer scale of prey consumed at the species level some differences are found between the native and exotic species. These results suggest that if coexistence is due to trophic niche partitioning it only occurs at the level of the consumed species. However, coexistence may also be due to a combination of different strategies (home-range size, time and space use that structured the different realized niches of each species.

Estimating the global conservation status of more than 15,000 Amazonian tree species

Science.gov (United States)

ter Steege, Hans; Pitman, Nigel C. A.; Killeen, Timothy J.; Laurance, William F.; Peres, Carlos A.; Guevara, Juan Ernesto; Salomão, Rafael P.; Castilho, Carolina V.; Amaral, Iêda Leão; de Almeida Matos, Francisca Dionízia; de Souza Coelho, Luiz; Magnusson, William E.; Phillips, Oliver L.; de Andrade Lima Filho, Diogenes; de Jesus Veiga Carim, Marcelo; Irume, Mariana Victória; Martins, Maria Pires; Molino, Jean-François; Sabatier, Daniel; Wittmann, Florian; López, Dairon Cárdenas; da Silva Guimarães, José Renan; Mendoza, Abel Monteagudo; Vargas, Percy Núñez; Manzatto, Angelo Gilberto; Reis, Neidiane Farias Costa; Terborgh, John; Casula, Katia Regina; Montero, Juan Carlos; Feldpausch, Ted R.; Honorio Coronado, Euridice N.; Montoya, Alvaro Javier Duque; Zartman, Charles Eugene; Mostacedo, Bonifacio; Vasquez, Rodolfo; Assis, Rafael L.; Medeiros, Marcelo Brilhante; Simon, Marcelo Fragomeni; Andrade, Ana; Camargo, José Luís; Laurance, Susan G. W.; Nascimento, Henrique Eduardo Mendonça; Marimon, Beatriz S.; Marimon, Ben-Hur; Costa, Flávia; Targhetta, Natalia; Vieira, Ima Célia Guimarães; Brienen, Roel; Castellanos, Hernán; Duivenvoorden, Joost F.; Mogollón, Hugo F.; Piedade, Maria Teresa Fernandez; Aymard C., Gerardo A.; Comiskey, James A.; Damasco, Gabriel; Dávila, Nállarett; García-Villacorta, Roosevelt; Diaz, Pablo Roberto Stevenson; Vincentini, Alberto; Emilio, Thaise; Levis, Carolina; Schietti, Juliana; Souza, Priscila; Alonso, Alfonso; Dallmeier, Francisco; Ferreira, Leandro Valle; Neill, David; Araujo-Murakami, Alejandro; Arroyo, Luzmila; Carvalho, Fernanda Antunes; Souza, Fernanda Coelho; do Amaral, Dário Dantas; Gribel, Rogerio; Luize, Bruno Garcia; Pansonato, Marcelo Petrati; Venticinque, Eduardo; Fine, Paul; Toledo, Marisol; Baraloto, Chris; Cerón, Carlos; Engel, Julien; Henkel, Terry W.; Jimenez, Eliana M.; Maas, Paul; Mora, Maria Cristina Peñuela; Petronelli, Pascal; Revilla, Juan David Cardenas; Silveira, Marcos; Stropp, Juliana; Thomas-Caesar, Raquel; Baker, Tim R.; Daly, Doug; Paredes, Marcos Ríos; da Silva, Naara Ferreira; Fuentes, Alfredo; Jørgensen, Peter Møller; Schöngart, Jochen; Silman, Miles R.; Arboleda, Nicolás Castaño; Cintra, Bruno Barçante Ladvocat; Valverde, Fernando Cornejo; Di Fiore, Anthony; Phillips, Juan Fernando; van Andel, Tinde R.; von Hildebrand, Patricio; Barbosa, Edelcilio Marques; de Matos Bonates, Luiz Carlos; de Castro, Deborah; de Sousa Farias, Emanuelle; Gonzales, Therany; Guillaumet, Jean-Louis; Hoffman, Bruce; Malhi, Yadvinder; de Andrade Miranda, Ires Paula; Prieto, Adriana; Rudas, Agustín; Ruschell, Ademir R.; Silva, Natalino; Vela, César I. A.; Vos, Vincent A.; Zent, Eglée L.; Zent, Stanford; Cano, Angela; Nascimento, Marcelo Trindade; Oliveira, Alexandre A.; Ramirez-Angulo, Hirma; Ramos, José Ferreira; Sierra, Rodrigo; Tirado, Milton; Medina, Maria Natalia Umaña; van der Heijden, Geertje; Torre, Emilio Vilanova; Vriesendorp, Corine; Wang, Ophelia; Young, Kenneth R.; Baider, Claudia; Balslev, Henrik; de Castro, Natalia; Farfan-Rios, William; Ferreira, Cid; Mendoza, Casimiro; Mesones, Italo; Torres-Lezama, Armando; Giraldo, Ligia Estela Urrego; Villarroel, Daniel; Zagt, Roderick; Alexiades, Miguel N.; Garcia-Cabrera, Karina; Hernandez, Lionel; Huamantupa-Chuquimaco, Isau; Milliken, William; Cuenca, Walter Palacios; Pansini, Susamar; Pauletto, Daniela; Arevalo, Freddy Ramirez; Sampaio, Adeilza Felipe; Valderrama Sandoval, Elvis H.; Gamarra, Luis Valenzuela

2015-01-01

Estimates of extinction risk for Amazonian plant and animal species are rare and not often incorporated into land-use policy and conservation planning. We overlay spatial distribution models with historical and projected deforestation to show that at least 36% and up to 57% of all Amazonian tree species are likely to qualify as globally threatened under International Union for Conservation of Nature (IUCN) Red List criteria. If confirmed, these results would increase the number of threatened plant species on Earth by 22%. We show that the trends observed in Amazonia apply to trees throughout the tropics, and we predict that most of the world’s >40,000 tropical tree species now qualify as globally threatened. A gap analysis suggests that existing Amazonian protected areas and indigenous territories will protect viable populations of most threatened species if these areas suffer no further degradation, highlighting the key roles that protected areas, indigenous peoples, and improved governance can play in preventing large-scale extinctions in the tropics in this century. PMID:26702442

Biodiversity of Earthworms in Taiwan: a Species Checklist with the Confirmation and New Records of the Exotic Lumbricids Eisenia fetida and Eiseniella tetraedra

Directory of Open Access Journals (Sweden)

Robert J. Blakemore

2006-09-01

Full Text Available Terrestrial megadrile earthworms variously reported from Taiwan including Lanyu Island (Botel Tobago number approximately 70 species with 29 of these, or 40%, non-natives for which 69% are Asiatic Megascolecidae and 21% are Lumbricidae of Holarctic origin. An additional 27 unnamed species have been identified from Ilan county north-eastern Taiwan by Chen et al. (2003 that, if published, would bring the total to around 100 known species. The checklist is also provided with the confirmation and new records of the exotic lumbricids Eisenia fetida (Savigny and Eiseniella tetraedra (Savigny.

Guild of Frugivores on three fruit-producing tree species Polyscias ...

African Journals Online (AJOL)

Guild of Frugivores on three fruit-producing tree species Polyscias fulva, Syzyguim Guineensis SUBSP. Bamensdae and Pouteria Altissima ) in Ngel Nyaki Forest Reserve, a Montane Forest Ecosystem in Nigeria.

Early establishment of trees at the alpine treeline: idiosyncratic species responses to temperature-moisture interactions.

Science.gov (United States)

Loranger, Hannah; Zotz, Gerhard; Bader, Maaike Y

2016-01-01

On a global scale, temperature is the main determinant of arctic and alpine treeline position. However on a local scale, treeline form and position vary considerably due to other climatic factors, tree species ecology and life-stage-dependent responses. For treelines to advance poleward or uphill, the first steps are germination and seedling establishment. These earliest life stages may be major bottlenecks for treeline tree populations and will depend differently on climatic conditions than adult trees. We investigated the effect of soil temperature and moisture on germination and early seedling survival in a field experiment in the French Alps near the local treeline (2100 m a.s.l.) using passive temperature manipulations and two watering regimes. Five European treeline tree species were studied: Larix decidua, Picea abies, Pinus cembra, Pinus uncinata and Sorbus aucuparia In addition, we monitored the germination response of three of these species to low temperatures under controlled conditions in growth chambers. The early establishment of these trees at the alpine treeline was limited either by temperature or by moisture, the sensitivity to one factor often depending on the intensity of the other. The results showed that the relative importance of the two factors and the direction of the effects are highly species-specific, while both factors tend to have consistent effects on both germination and early seedling survival within each species. We show that temperature and water availability are both important contributors to establishment patterns of treeline trees and hence to species-specific forms and positions of alpine treelines. The observed idiosyncratic species responses highlight the need for studies including several species and life-stages to create predictive power concerning future treeline dynamics. © The Authors 2016. Published by Oxford University Press on behalf of the Annals of Botany Company.

Physiological Effects of Smoke Exposure on Deciduous and Conifer Tree Species

International Nuclear Information System (INIS)

Calder, W.J.; Lifferth, G.; Clair, S.B.S.; Moritz, M.A.

2010-01-01

Smoke from forest fires can persist in the environment for weeks and while there is a substantial amount of literature examining the effects of smoke exposure on seed germination, the effects of smoke on leaf function are nearly un investigated. The objective of this study was to compare growth and primary and secondary metabolic responses of deciduous angiosperm and evergreen conifer tree species to short smoke exposure. Twenty minutes of smoke exposure resulted in a greater than 50% reduction in photosynthetic capacity in five of the six species we examined. Impairment of photosynthesis in response to smoke was a function of reductions in stomatal conductance and biochemical limitations. In general, deciduous angiosperm species showed a greater sensitivity than evergreen conifers. While there were significant decreases in photosynthesis and stomatal conductance, smoke had no significant effect on growth or secondary defense compound production in any of the tree species examined.

Physiological Effects of Smoke Exposure on Deciduous and Conifer Tree Species

Directory of Open Access Journals (Sweden)

W. John Calder

2010-01-01

Full Text Available Smoke from forest fires can persist in the environment for weeks and while there is a substantial amount of literature examining the effects of smoke exposure on seed germination, the effects of smoke on leaf function are nearly uninvestigated. The objective of this study was to compare growth and primary and secondary metabolic responses of deciduous angiosperm and evergreen conifer tree species to short smoke exposure. Twenty minutes of smoke exposure resulted in a greater than 50% reduction in photosynthetic capacity in five of the six species we examined. Impairment of photosynthesis in response to smoke was a function of reductions in stomatal conductance and biochemical limitations. In general, deciduous angiosperm species showed a greater sensitivity than evergreen conifers. While there were significant decreases in photosynthesis and stomatal conductance, smoke had no significant effect on growth or secondary defense compound production in any of the tree species examined.

Local biotic adaptation of trees and shrubs to plant neighbors

Science.gov (United States)

Grady, Kevin C.; Wood, Troy E.; Kolb, Thomas E.; Hersch-Green, Erika; Shuster, Stephen M.; Gehring, Catherine A.; Hart, Stephen C.; Allan, Gerard J.; Whitham, Thomas G.

2017-01-01

Natural selection as a result of plant–plant interactions can lead to local biotic adaptation. This may occur where species frequently interact and compete intensely for resources limiting growth, survival, and reproduction. Selection is demonstrated by comparing a genotype interacting with con- or hetero-specific sympatric neighbor genotypes with a shared site-level history (derived from the same source location), to the same genotype interacting with foreign neighbor genotypes (from different sources). Better genotype performance in sympatric than allopatric neighborhoods provides evidence of local biotic adaptation. This pattern might be explained by selection to avoid competition by shifting resource niches (differentiation) or by interactions benefitting one or more members (facilitation). We tested for local biotic adaptation among two riparian trees, Populus fremontii and Salix gooddingii, and the shrub Salix exigua by transplanting replicated genotypes from multiple source locations to a 17 000 tree common garden with sympatric and allopatric treatments along the Colorado River in California. Three major patterns were observed: 1) across species, 62 of 88 genotypes grew faster with sympatric neighbors than allopatric neighbors; 2) these growth rates, on an individual tree basis, were 44, 15 and 33% higher in sympatric than allopatric treatments for P. fremontii, S. exigua and S. gooddingii, respectively, and; 3) survivorship was higher in sympatric treatments for P. fremontiiand S. exigua. These results support the view that fitness of foundation species supporting diverse communities and dominating ecosystem processes is determined by adaptive interactions among multiple plant species with the outcome that performance depends on the genetic identity of plant neighbors. The occurrence of evolution in a plant-community context for trees and shrubs builds on ecological evolutionary research that has demonstrated co-evolution among herbaceous taxa, and

Soil greenhouse gas fluxes from different tree species on Taihang Mountain, North China

Science.gov (United States)

Liu, X. P.; Zhang, W. J.; Hu, C. S.; Tang, X. G.

2014-03-01

The objectives of this study were to investigate seasonal variation of greenhouse gas fluxes from soils on sites dominated by plantation (Robinia pseudoacacia, Punica granatum, and Ziziphus jujube) and natural regenerated forests (Vitex negundo var. heterophylla, Leptodermis oblonga, and Bothriochloa ischcemum), and to identify how tree species, litter exclusion, and soil properties (soil temperature, soil moisture, soil organic carbon, total N, soil bulk density, and soil pH) explained the temporal and spatial variation in soil greenhouse gas fluxes. Fluxes of greenhouse gases were measured using static chamber and gas chromatography techniques. Six static chambers were randomly installed in each tree species. Three chambers were randomly designated to measure the impacts of surface litter exclusion, and the remaining three were used as a control. Field measurements were conducted biweekly from May 2010 to April 2012. Soil CO2 emissions from all tree species were significantly affected by soil temperature, soil moisture, and their interaction. Driven by the seasonality of temperature and precipitation, soil CO2 emissions demonstrated a clear seasonal pattern, with fluxes significantly higher during the rainy season than during the dry season. Soil CH4 and N2O fluxes were not significantly correlated with soil temperature, soil moisture, or their interaction, and no significant seasonal differences were detected. Soil organic carbon and total N were significantly positively correlated with CO2 and N2O fluxes. Soil bulk density was significantly negatively correlated with CO2 and N2O fluxes. Soil pH was not correlated with CO2 and N2O emissions. Soil CH4 fluxes did not display pronounced dependency on soil organic carbon, total N, soil bulk density, and soil pH. Removal of surface litter significantly decreased in CO2 emissions and CH4 uptakes. Soils in six tree species acted as sinks for atmospheric CH4. With the exception of Ziziphus jujube, soils in all tree

Response of seedlings of different tree species to elevated C02 in Changbai Mountain

Institute of Scientific and Technical Information of China (English)

DAILi-min; JILan-zhu; WANGMiao; LIQiu-rong

2003-01-01

Eco-physiological responses of seedlings of eight species, Pinus koraiensis, Picea koraiensis, Lanx olgensis,Populus ussuriensis, Betula platyphylla, Tilia amurensis, Traxinus mandshurica and Acer mono from broadleaved/Korean pine forest, to elevated CO2 were studied by using open-top chambers under natural sunlight in Changbai Mountain, China in two growing seasons (1998-1999). Two concentrations of CO2 were designed: elevated CO2 (700 pmol· mol-1) and ambient CO2 (400μmol· mol-1). The study results showed that the height growth of the tree seedlings grown at elevated CO2 increased by about 10%-40% compared to those grown at ambient CO2. And the water using efficiency of seedlings also followed the same tendency. However, the responses of seedlings in transpiration and chlorophyll content to elevated CO2 varied with tree species.The broad-leaf tree species were more sensitive to the elevated CO2than conifer tree species. All seedlings showed a photo-synthetic acclimation to Iong-term elevated CO2.

The diversity and richness of tree species of Tambang Sawah forest Kerinci-Seblat National Park Sumatra Indonesia

Directory of Open Access Journals (Sweden)

Agus Susatya

2010-12-01

Full Text Available The conservation of tropical ecosystem is increasingly relevant as the recent global warming and climate change generate serious impacts on human life. Tropical forest becomes an important ecosystem to fight global warming due to its capability to sequester atmospheric carbon and to mitigate climate change. It is very unfortunate that such a vital ecosystem has been severely subjected to conversion to both plantations and illegal loggings. The tropical ecosystem has long been recognized to have high species diversity, but very few individual trees per species. The latter is almost ignored, even though can certainly bring serious difficulties on tree conservation. The objectives of the research were to know the tree community structure of Tambang Sawah Forest, Kerinci-Seblat National Park, and to determine the rareness of tree species. A plot of 1 ha was established at Tambang Sawah, Kerinci-Seblat National Park, Lebong Regency. All trees with BDH of > 5 cm were collected their herbarium specimens, and identifi ed. The results showed that Tambang Sawah forest consists of 42 families, 94 genera, and 185 tree species/ha. It has 19.51% (8 families, and 26.82% (10 families respectively categorized as very rare and rare. The pattern also occurs at genus level, where both categories contribute to 81.91% (78 genera of the total genera. In species level, both are respectively 90 and 28 species, and altogether contribute to 63.78% of the total species. These values appeared higher than that of the other forests in Bengkulu. Across taxon level, very rare and rare categories appeared to be an ecological attribute in Sumatran forests. This implies that the loss of single tree can cause the loss of entire family. The conservation works even turn into more difficult, because tropical trees are commonly diocious, even bisexual trees, they tend to be self-incompatible, and out-crossed, and required at least 200 mature trees to ensure sexual regeneration and to

Foliage biomass qualitative indices of selected forest forming tree species in Ukrainian Steppe

Directory of Open Access Journals (Sweden)

Sytnyk Svitlana

2017-06-01

Full Text Available Our study objective was research on the assimilation component of aboveground biomass of trees and its correlation with mensurational indices of trees (age, diameter and height in stands of the main forest forming species in the Ukrainian Northern Steppe zone - Pinus sylvestris L. (Scots pine and Robinia pseudoacacia L. (Black locust. The research was carried out in forest stands subordinated to the State Agency of Forest Resources of Ukraine. We used experimental data collected on sample plots established during years 2014-2016. The main research results prove that the foliage share in the tree greenery biomass structure had a wide range of values. For both investigated species, a positive correlation was found between the dry matter content in the tree foliage and the tree age, height and diameter. The foliage share in tree greenery biomass decreased with increasing mensurational index values. Correlation analysis revealed linear relationships between the mensurational indices and the discussed aboveground live biomass parameters. The closest correlation was observed between the stand age, mean stand diameter, mean stand height and dry matter content in the foliage.